Science.gov

Sample records for rotameric transitions insights

  1. A phenylalanine rotameric switch for signal-state control in bacterial chemoreceptors

    NASA Astrophysics Data System (ADS)

    Ortega, Davi R.; Yang, Chen; Ames, Peter; Baudry, Jerome; Parkinson, John S.; Zhulin, Igor B.

    2013-12-01

    Bacterial chemoreceptors are widely used as a model system for elucidating the molecular mechanisms of transmembrane signalling and have provided a detailed understanding of how ligand binding by the receptor modulates the activity of its associated kinase CheA. However, the mechanisms by which conformational signals move between signalling elements within a receptor dimer and how they control kinase activity remain unknown. Here, using long molecular dynamics simulations, we show that the kinase-activating cytoplasmic tip of the chemoreceptor fluctuates between two stable conformations in a signal-dependent manner. A highly conserved residue, Phe396, appears to serve as the conformational switch, because flipping of the stacked aromatic rings of an interacting F396-F396‧ pair in the receptor homodimer takes place concomitantly with the signal-related conformational changes. We suggest that interacting aromatic residues, which are common stabilizers of protein tertiary structure, might serve as rotameric molecular switches in other biological processes as well.

  2. The Role of CH···O Coulombic Interactions in Determining Rotameric Conformations of Phenyl Substituted 1,3-Dioxanes and Tetrahydropyrans.

    PubMed

    Wiberg, Kenneth B; Lambert, Kyle M; Bailey, William F

    2015-08-21

    The rotameric conformations of the phenyl ring in both the axial and the equatorial conformers of phenyl substituted 1,3-dioxanes and tetrahydropyrans are compared with those of the corresponding phenylcyclohexanes at the MP2/6-311+G* level. The compounds with an axial phenyl commonly adopt a conformation in which the plane of the aromatic ring is perpendicular to the benzylic C-H bond. However, axial 5-phenyl-1,3-dioxane adopts a "parallel" conformation that allows an ortho hydrogen to be proximate to the two ring oxygens, leading to attractive CH···O interactions. Stabilizing Coulombic interactions of this sort are found with many of the oxygen-containing six-membered rings that were investigated. PMID:26182246

  3. Understanding the transition states of phosphodiester bond cleavage: insights from heavy atom isotope effects.

    PubMed

    Cassano, Adam G; Anderson, Vernon E; Harris, Michael E

    2004-01-01

    The nucleotides of DNA and RNA are joined by phosphodiester linkages whose synthesis and hydrolysis are catalyzed by numerous essential enzymes. Two prominent mechanisms have been proposed for RNA and protein enzyme catalyzed cleavage of phosphodiester bonds in RNA: (a) intramolecular nucleophilic attack by the 2'-hydroxyl group adjacent to the reactive phosphate; and (b) intermolecular nucleophilic attack by hydroxide, or other oxyanion. The general features of these two mechanisms have been established by physical organic chemical analyses; however, a more detailed understanding of the transition states of these reactions is emerging from recent kinetic isotope effect (KIE) studies. The recent data show interesting differences between the chemical mechanisms and transition state structures of the inter- and intramolecular reactions, as well as provide information on the impact of metal ion, acid, and base catalysis on these mechanisms. Importantly, recent nonenzymatic model studies show that interactions with divalent metal ions, an important feature of many phosphodiesterase active sites, can influence both the mechanism and transition state structure of nonenzymatic phosphodiester cleavage. Such detailed investigations are important because they mimic catalytic strategies employed by both RNA and protein phosphodiesterases, and so set the stage for explorations of enzyme-catalyzed transition states. Application of KIE analyses for this class of enzymes is just beginning, and several important technical challenges remain to be overcome. Nonetheless, such studies hold great promise since they will provide novel insights into the role of metal ions and other active site interactions.

  4. Motivations for enterprise system adoption in transition economies: insights from Poland

    NASA Astrophysics Data System (ADS)

    Soja, Piotr; Weistroffer, Heinz Roland

    2016-06-01

    Enterprise system (ES) adoption can bring many benefits, but may also put tremendous strain on an organisation or business, sometimes with disastrous outcomes. The specific motivations and expectations that lead to ES adoption may impact the success or failure of these endeavours, and understanding these motivations may be useful in predicting the success of ES projects. Most of the published research on ES adoption motivation has been in the context of highly developed countries. The social, cultural, economic and political conditions in developing, emerging and transition economies make for a different business environment, and insights obtained from developed countries may not always transfer to these settings. This study seeks to identify and help understand the motivations for ES adoption specifically in transition economies, as these economies play a significant role in the global market, but have not been receiving adequate research attention. Drawing on the experience of 129 ES adopters in Poland, a transition economy, this study categorises motivations into coherent groups of issues and evaluates the influence of discovered motivations on ES adoption success. Further, motivations revealed by this study are compared with motivations reported by prior research conducted in developed countries.

  5. Insights into the Microbial and Viral Dynamics of a Coastal Downwelling-Upwelling Transition

    PubMed Central

    Gregoracci, Gustavo Bueno; Soares, Ana Carolina dos Santos; Miranda, Milene Dias; Coutinho, Ricardo; Thompson, Fabiano L.

    2015-01-01

    Although previous studies have described opposing states in upwelling regions, i.e., the rise of cold nutrient-rich waters and prevalence of surface warm nutrient-poor waters, few have addressed the transition from one state to the other. This study aimed to describe the microbial and viral structure during this transition and was able to obtain the taxonomic and metabolic compositions as well as physical-chemical data. This integrated approach allowed for a better understanding of the dynamics of the downwelling upwelling transition, suggesting that a wealth of metabolic processes and ecological interactions are occurring in the minute fractions of the plankton (femto, pico, nano). These processes and interactions included evidence of microbial predominance during downwelling (with nitrogen recycling and aerobic anoxygenic photosynthesis), different viral predation pressures over primary production in different states (cyanobacteria vs eukaryotes), and a predominance of diatoms and selected bacterial and archaeal groups during upwelling (with the occurrence of a wealth of nitrogen metabolism involving ammonia). Thus, the results provided insights into which microbes, viruses and microbial-mediated processes are probably important in the functioning of upwelling systems. PMID:26327119

  6. Insight into structural phase transitions from the decoupled anharmonic mode approximation

    NASA Astrophysics Data System (ADS)

    Adams, Donat J.; Passerone, Daniele

    2016-08-01

    We develop a formalism (decoupled anharmonic mode approximation, DAMA) that allows calculation of the vibrational free energy using density functional theory even for materials which exhibit negative curvature of the potential energy surface with respect to atomic displacements. We investigate vibrational modes beyond the harmonic approximation and approximate the potential energy surface with the superposition of the accurate potential along each normal mode. We show that the free energy can stabilize crystal structures at finite temperatures which appear dynamically unstable at T  =  0. The DAMA formalism is computationally fast because it avoids statistical sampling through molecular dynamics calculations, and is in principle completely ab initio. It is free of statistical uncertainties and independent of model parameters, but can give insight into the mechanism of a structural phase transition. We apply the formalism to the perovskite cryolite, and investigate the temperature-driven phase transition from the P21/n to the Immm space group. We calculate a phase transition temperature between 710 and 950 K, in fair agreement with the experimental value of 885 K. This can be related to the underestimation of the interaction of the vibrational states. We also calculate the main axes of the thermal ellipsoid and can explain the experimentally observed increase of its volume for the fluorine by 200-300% throughout the phase transition. Our calculations suggest the appearance of tunneling states in the high temperature phase. The convergence of the vibrational DOS and of the critical temperature with respect of reciprocal space sampling is investigated using the polarizable-ion model.

  7. Insight into structural phase transitions from the decoupled anharmonic mode approximation.

    PubMed

    Adams, Donat J; Passerone, Daniele

    2016-08-01

    We develop a formalism (decoupled anharmonic mode approximation, DAMA) that allows calculation of the vibrational free energy using density functional theory even for materials which exhibit negative curvature of the potential energy surface with respect to atomic displacements. We investigate vibrational modes beyond the harmonic approximation and approximate the potential energy surface with the superposition of the accurate potential along each normal mode. We show that the free energy can stabilize crystal structures at finite temperatures which appear dynamically unstable at T  =  0. The DAMA formalism is computationally fast because it avoids statistical sampling through molecular dynamics calculations, and is in principle completely ab initio. It is free of statistical uncertainties and independent of model parameters, but can give insight into the mechanism of a structural phase transition. We apply the formalism to the perovskite cryolite, and investigate the temperature-driven phase transition from the P21/n to the Immm space group. We calculate a phase transition temperature between 710 and 950 K, in fair agreement with the experimental value of 885 K. This can be related to the underestimation of the interaction of the vibrational states. We also calculate the main axes of the thermal ellipsoid and can explain the experimentally observed increase of its volume for the fluorine by 200-300% throughout the phase transition. Our calculations suggest the appearance of tunneling states in the high temperature phase. The convergence of the vibrational DOS and of the critical temperature with respect of reciprocal space sampling is investigated using the polarizable-ion model. PMID:27269514

  8. Insight into structural phase transitions from the decoupled anharmonic mode approximation

    NASA Astrophysics Data System (ADS)

    Adams, Donat J.; Passerone, Daniele

    2016-08-01

    We develop a formalism (decoupled anharmonic mode approximation, DAMA) that allows calculation of the vibrational free energy using density functional theory even for materials which exhibit negative curvature of the potential energy surface with respect to atomic displacements. We investigate vibrational modes beyond the harmonic approximation and approximate the potential energy surface with the superposition of the accurate potential along each normal mode. We show that the free energy can stabilize crystal structures at finite temperatures which appear dynamically unstable at T  =  0. The DAMA formalism is computationally fast because it avoids statistical sampling through molecular dynamics calculations, and is in principle completely ab initio. It is free of statistical uncertainties and independent of model parameters, but can give insight into the mechanism of a structural phase transition. We apply the formalism to the perovskite cryolite, and investigate the temperature-driven phase transition from the P21/n to the Immm space group. We calculate a phase transition temperature between 710 and 950 K, in fair agreement with the experimental value of 885 K. This can be related to the underestimation of the interaction of the vibrational states. We also calculate the main axes of the thermal ellipsoid and can explain the experimentally observed increase of its volume for the fluorine by 200–300% throughout the phase transition. Our calculations suggest the appearance of tunneling states in the high temperature phase. The convergence of the vibrational DOS and of the critical temperature with respect of reciprocal space sampling is investigated using the polarizable-ion model.

  9. Rotameric transformations in the photochemistry of TpM(CO)2(η(3)-C3H4R), where Tp = tris(pyrazolyl)borate, M = Mo or W, and R = H or Me.

    PubMed

    Thornley, Wyatt A; Bitterwolf, Thomas E

    2015-05-01

    Low energy photolysis of TpM(CO)2(η(3)-C3H4R), where Tp = tris(pyrazolyl)borate, M = Mo or W, and R = 2-H or 2-Me in PVC matrices at 85 K results in exo/gauche isomerism of the allyl ligand. This transformation comes in contrast to the behaviour observed in cyclopentadienyl analogues which undergo exo/endo isomerism. DFT computations reveal an η(3) → η(1)* → η(3) mechanism for the allyl rotameric interconversion where the η(1)*-allyl intermediate is generated upon MLCT excitation.

  10. Benchmark quantum-chemical calculations on a complete set of rotameric families of the DNA sugar-phosphate backbone and their comparison with modern density functional theory.

    PubMed

    Mládek, Arnošt; Krepl, Miroslav; Svozil, Daniel; Cech, Petr; Otyepka, Michal; Banáš, Pavel; Zgarbová, Marie; Jurečka, Petr; Sponer, Jiří

    2013-05-21

    The DNA sugar-phosphate backbone has a substantial influence on the DNA structural dynamics. Structural biology and bioinformatics studies revealed that the DNA backbone in experimental structures samples a wide range of distinct conformational substates, known as rotameric DNA backbone conformational families. Their correct description is essential for methods used to model nucleic acids and is known to be the Achilles heel of force field computations. In this study we report the benchmark database of MP2 calculations extrapolated to the complete basis set of atomic orbitals with aug-cc-pVTZ and aug-cc-pVQZ basis sets, MP2(T,Q), augmented by ΔCCSD(T)/aug-cc-pVDZ corrections. The calculations are performed in the gas phase as well as using a COSMO solvent model. This study includes a complete set of 18 established and biochemically most important families of DNA backbone conformations and several other salient conformations that we identified in experimental structures. We utilize an electronically sufficiently complete DNA sugar-phosphate-sugar (SPS) backbone model system truncated to prevent undesired intramolecular interactions. The calculations are then compared with other QM methods. The BLYP and TPSS functionals supplemented with Grimme's D3(BJ) dispersion term provide the best tradeoff between computational demands and accuracy and can be recommended for preliminary conformational searches as well as calculations on large model systems. Among the tested methods, the best agreement with the benchmark database has been obtained for the double-hybrid DSD-BLYP functional in combination with a quadruple-ζ basis set, which is, however, computationally very demanding. The new hybrid density functionals PW6B95-D3 and MPW1B95-D3 yield outstanding results and even slightly outperform the computationally more demanding PWPB95 double-hybrid functional. B3LYP-D3 is somewhat less accurate compared to the other hybrids. Extrapolated MP2(D,T) calculations are not as

  11. Structural insights into the cubic-hexagonal phase transition kinetics of monoolein modulated by sucrose solutions

    PubMed Central

    Reese, Caleb W.; Strango, Zachariah I.; Dell, Zachary R.; Tristram-Nagle, Stephanie; Harper, Paul E.

    2015-01-01

    Using DSC (differential scanning calorimetry), we measure the kinetics of the cubic-HII phase transition of monoolein in bulk sucrose solutions. We find that the transition temperature is dramatically lowered, with each 1 mol/kg of sucrose concentration dropping the transition by 20 °C. The kinetics of this transition also slow greatly with increasing sucrose concentration. For low sucrose concentrations, the kinetics are asymmetric, with the cooling (HII-cubic) transition taking twice as long as the heating (cubic-HII) transition. This asymmetry in transition times is reduced for higher sucrose concentrations. The cooling transition (cubic-HII) exhibits Avrami exponents in the range of 2 to 2.5 and the heating transition shows Avrami exponents ranging from 1 to 3. A classical Avrami interpretation would be that these processes occur via a one or two dimensional pathway with variable nucleation rates. A non-classical perspective would suggest that these exponents reflect the time dependence of pore formation (cooling) and destruction (heating). New density measurements of monoolein show that the currently accepted value is about 5% too low; this has substantial implications for electron density modeling. Structural calculations indicate that the head group area and lipid length in the cubic-HII transition shrink by about 12 % and 4 % respectively; this reduction is practically the same as that seen in a lipid with a very different molecular structure (rac-di-12:0 β-GlcDAG) that makes the same transition. Thermodynamic considerations suggest there is a hydration shell about one water molecule thick in front of the lipid head groups in both the cubic and HII phases. PMID:25758637

  12. NEW INSIGHT INTO THE SOLAR SYSTEM’S TRANSITION DISK PHASE PROVIDED BY THE METAL-RICH CARBONACEOUS CHONDRITE ISHEYEVO

    SciTech Connect

    Morris, Melissa A.; Garvie, Laurence A. J.; Knauth, L. Paul

    2015-03-10

    Many aspects of planet formation are controlled by the amount of gas remaining in the natal protoplanetary disks (PPDs). Infrared observations show that PPDs undergo a transition stage at several megayears, during which gas densities are reduced. Our Solar System would have experienced such a stage. However, there is currently no data that provides insight into this crucial time in our PPD’s evolution. We show that the Isheyevo meteorite contains the first definitive evidence for a transition disk stage in our Solar System. Isheyevo belongs to a class of metal-rich meteorites whose components have been dated at almost 5 Myr after formation of Ca, Al-rich inclusions, and exhibits unique sedimentary layers that imply formation through gentle sedimentation. We show that such layering can occur via the gentle sweep-up of material found in the impact plume resulting from the collision of two planetesimals. Such sweep-up requires gas densities consistent with observed transition disks (10{sup −12}–10{sup −11} g cm{sup −3}). As such, Isheyevo presents the first evidence of our own transition disk and provides new constraints on the evolution of our solar nebula.

  13. Zipping and Unzipping of Adenylate Kinase: Atomistic Insights into the Ensemble of Open ↔ Closed Transitions

    PubMed Central

    Beckstein, Oliver; Denning, Elizabeth J.; Perilla, Juan R.; Woolf, Thomas B.

    2009-01-01

    Adenylate kinase (AdK), a phosphotransferase enzyme, plays an important role in cellular energy homeostasis. It undergoes a large conformational change between an open and a closed state, even in the absence of substrate. We investigate the apo-AdK transition at the atomic level both with free energy calculations and our new dynamic importance sampling (DIMS) molecular dynamics (MD) method. DIMS is shown to sample biologically relevant conformations as verified by comparing an ensemble of hundreds of DIMS transitions to AdK crystal structure intermediates. The simulations reveal in atomic detail how hinge regions partially and intermittently unfold during the transition. Conserved salt bridges are seen to have important structural and dynamic roles; in particular four ionic bonds are identified that open in a sequential, zipper-like fashion and thus dominate the free energy landscape of the transition. Transitions between the closed and open conformations only have to overcome moderate free energy barriers. Unexpectedly, the closed and open state encompass broad free energy basins that contain conformations differing in domain hinge motions by up to 40°. The significance of these extended states is discussed in relation to recent experimental FRET measurements. Taken together, these results demonstrate how a small number of cooperative key interactions can shape the overall dynamics of an enzyme and suggest an “all-or-nothing” mechanism for the opening and closing of AdK. Our efficient DIMS-MD computer simulation approach can provide a detailed picture of a functionally important macromolecular transition and thus help to interpret and suggest experiments to probe the conformational landscape of dynamic proteins such as AdK. PMID:19751742

  14. Electronic structure of carbon dioxide under pressure and insights into the molecular-to-nonmolecular transition.

    PubMed

    Shieh, Sean R; Jarrige, Ignace; Wu, Min; Hiraoka, Nozomu; Tse, John S; Mi, Zhongying; Kaci, Linada; Jiang, Jian-Zhong; Cai, Yong Q

    2013-11-12

    Knowledge of the high-pressure behavior of carbon dioxide (CO2), an important planetary material found in Venus, Earth, and Mars, is vital to the study of the evolution and dynamics of the planetary interiors as well as to the fundamental understanding of the C-O bonding and interaction between the molecules. Recent studies have revealed a number of crystalline polymorphs (CO2-I to -VII) and an amorphous phase under high pressure-temperature conditions. Nevertheless, the reported phase stability field and transition pressures at room temperature are poorly defined, especially for the amorphous phase. Here we shed light on the successive pressure-induced local structural changes and the molecular-to-nonmolecular transition of CO2 at room temperature by performing an in situ study of the local electronic structure using X-ray Raman scattering, aided by first-principle exciton calculations. We show that the transition from CO2-I to CO2-III was initiated at around 7.4 GPa, and completed at about 17 GPa. The present study also shows that at ~37 GPa, molecular CO2 starts to polymerize to an extended structure with fourfold coordinated carbon and minor CO3 and CO-like species. The observed pressure is more than 10 GPa below previously reported. The disappearance of the minority species at 63(± 3) GPa suggests that a previously unknown phase transition within the nonmolecular phase of CO2 has occurred. PMID:24167283

  15. Student Transition from Primary to Lower Secondary School in Cambodia: Narrative Insights into Complex Systems

    ERIC Educational Resources Information Center

    Edwards, D. Brent, Jr.; Zimmermann, Thomas; Sitha, Chhinh; Williams, James H.; Kitamura, Yuto

    2014-01-01

    This article has three purposes. First, it presents findings from a study of student retention and dropout in Cambodia, as pupils transition from primary to lower secondary school. Second, it aims to understand from an in-depth, emic perspective the dynamics of this process and the challenges that individual families and their students face around…

  16. Coordinated encoding between cell types in the retina: insights from the theory of phase transitions

    NASA Astrophysics Data System (ADS)

    Sharpee, Tatyana

    2015-03-01

    In this talk I will describe how the emergence of some types of neurons in the brain can be quantitatively described by the theory of transitions between different phases of matter. The two key parameters that control the separation of neurons into subclasses are the mean and standard deviation of noise levels among neurons in the population. The mean noise level plays the role of temperature in the classic theory of phase transitions, whereas the standard deviation is equivalent to pressure, in the case of liquid-gas transitions, or to magnetic field for magnetic transitions. Our results account for properties of two recently discovered types of salamander OFF retinal ganglion cells, as well as the absence of multiple types of ON cells. We further show that, across visual stimulus contrasts, retinal circuits continued to operate near the critical point whose quantitative characteristics matched those expected near a liquid-gas critical point and described by the nearest-neighbor Ising model in three dimensions. Because the retina needs to operate under changing stimulus conditions, the observed parameters of cell types corresponded to metastable states in the region between the spinodal line and the line describing maximally informative solutions. Such properties of neural circuits can maximize information transmission in a given environment while retaining the ability to quickly adapt to a new environment. NSF CAREER award 1254123 and NIH R01EY019493

  17. Recent insights into instability and transition to turbulence in open-flow systems

    NASA Technical Reports Server (NTRS)

    Morkovin, Mark V.

    1988-01-01

    Roads to turbulence in open-flow shear layers are interpreted as sequences of often competing instabilities. These correspond to primary and higher order restructurings of vorticity distributions which culminate in convected spatial disorder (with some spatial coherence on the scale of the shear layer) traditionally called turbulence. Attempts are made to interpret these phenomena in terms of concepts of convective and global instabilities on one hand, and of chaos and strange attractors on the other. The first is fruitful, and together with a review of mechanisms of receptivity provides a unifying approach to understanding and estimating transition to turbulence. In contrast, current evidence indicates that concepts of chaos are unlikely to help in predicting transition in open-flow systems. Furthermore, a distinction should apparently be made between temporal chaos and the convected spatial disorder of turbulence past Reynolds numbers where boundary layers and separated shear layers are formed.

  18. Molecular Dynamics Simulations of Factor Xa: Insight into Conformational Transition of its Binding Subsites

    PubMed Central

    Singh, Narender; Briggs, James M.

    2016-01-01

    Protein flexibility and conformational diversity is well known to be a key characteristic of the function of many proteins. Human blood coagulation proteins have multiple substrates, and various protein-protein interactions are required for the smooth functioning of the coagulation cascade to maintain blood hemostasis. To address how a protein may cope with multiple interactions with its structurally diverse substrates and the accompanied structural changes that may drive these changes, we studied human Factor X. We employed 20 ns of molecular dynamics (MD) and steered molecular dynamics (SMD) simulations on two different conformational forms of Factor X, open and closed, and observed an interchangeable conformational transition from one to another. This work also demonstrates the roles of various aromatic residues involved in aromatic-aromatic interactions which make this dynamic transition possible. PMID:18680100

  19. Decreased Temperate but not Polar Fish Productivity Across the Eocene-Oligocene Transition: Insights from Ichthyoliths

    NASA Astrophysics Data System (ADS)

    Zill, M.; Sibert, E. C.; Norris, R. D.

    2015-12-01

    The Eocene-Oligocene Transition (EOT, 38-28 Ma) was a period of global cooling and increased nutrient delivery to the ocean. It is associated with the onset of permanent ice sheet on Antarctica, and the beginning of a highly productive polar ecosystem, dominated by diatoms and favoring short, efficient food chains. In a highly efficient, large phytoplankton-dominated ecosystem, we would expect to see higher abundances of consumers, as fewer trophic steps means more carbon available to upper trophic level groups. Here we use the accumulation rate of ichthyoliths (fish teeth and dermal scales) to measure the relative export production of fish through this time period of changing climate. Records from the South Atlantic gyre (DSDP Site 522) the South Pacific Gyre (DSDP Site 596) and the Southern Ocean (DSDP Site 689) show a 50% reduction in ichthyolith accumulation rate in the vicinity the Eocene Oligocene boundary. However, this drop in fish production occurs just after the E/O in the Atlantic, 4 million years before the E/O in the Pacific and 6 million years prior to the E/O in the Southern Ocean. Since the EOT is generally associated with an increase in productivity and diatom blooms in the Southern Ocean and tropical Pacific, we would expect that the abundance of fish would increase across the transition. Our results are surprisingly the inverse of this expectation, and suggest that the transition from greenhouse to icehouse did not produce increase in forage fish or even a response of any kind during the climatological transition into the icehouse world. Indeed, it seems that ichthyolith accumulation rate and primary productivity are not perfectly linked, and it may be that ichthyolith accumulation is responding more to another factor, such as ocean temperature or prey availability that is not linked to the increased diatom production during the EOT.

  20. Insights into the water mean transit time in a high-elevation tropical ecosystem

    NASA Astrophysics Data System (ADS)

    Mosquera, Giovanny M.; Segura, Catalina; Vaché, Kellie B.; Windhorst, David; Breuer, Lutz; Crespo, Patricio

    2016-07-01

    This study focuses on the investigation of the mean transit time (MTT) of water and its spatial variability in a tropical high-elevation ecosystem (wet Andean páramo). The study site is the Zhurucay River Ecohydrological Observatory (7.53 km2) located in southern Ecuador. A lumped parameter model considering five transit time distribution (TTD) functions was used to estimate MTTs under steady-state conditions (i.e., baseflow MTT). We used a unique data set of the δ18O isotopic composition of rainfall and streamflow water samples collected for 3 years (May 2011 to May 2014) in a nested monitoring system of streams. Linear regression between MTT and landscape (soil and vegetation cover, geology, and topography) and hydrometric (runoff coefficient and specific discharge rates) variables was used to explore controls on MTT variability, as well as mean electrical conductivity (MEC) as a possible proxy for MTT. Results revealed that the exponential TTD function best describes the hydrology of the site, indicating a relatively simple transition from rainfall water to the streams through the organic horizon of the wet páramo soils. MTT of the streams is relatively short (0.15-0.73 years, 53-264 days). Regression analysis revealed a negative correlation between the catchment's average slope and MTT (R2 = 0.78, p < 0.05). MTT showed no significant correlation with hydrometric variables, whereas MEC increases with MTT (R2 = 0.89, p < 0.001). Overall, we conclude that (1) baseflow MTT confirms that the hydrology of the ecosystem is dominated by shallow subsurface flow; (2) the interplay between the high storage capacity of the wet páramo soils and the slope of the catchments provides the ecosystem with high regulation capacity; and (3) MEC is an efficient predictor of MTT variability in this system of catchments with relatively homogeneous geology.

  1. Insight into the microscopic structure of an AdS black hole from a thermodynamical phase transition.

    PubMed

    Wei, Shao-Wen; Liu, Yu-Xiao

    2015-09-11

    Comparing with an ordinary thermodynamic system, we investigate the possible microscopic structure of a charged anti-de Sitter black hole completely from the thermodynamic viewpoint. The number density of the black hole molecules is introduced to measure the microscopic degrees of freedom of the black hole. We found that the number density suffers a sudden change accompanied by a latent heat when the black hole system crosses the small-large black hole coexistence curve, while when the system passes the critical point, it encounters a second-order phase transition with a vanishing latent heat due to the continuous change of the number density. Moreover, the thermodynamic scalar curvature suggests that there is a weak attractive interaction between two black hole molecules. These phenomena might cast new insight into the underlying microscopic structure of a charged anti-de Sitter black hole. PMID:26406818

  2. Insight into the microscopic structure of an AdS black hole from a thermodynamical phase transition.

    PubMed

    Wei, Shao-Wen; Liu, Yu-Xiao

    2015-09-11

    Comparing with an ordinary thermodynamic system, we investigate the possible microscopic structure of a charged anti-de Sitter black hole completely from the thermodynamic viewpoint. The number density of the black hole molecules is introduced to measure the microscopic degrees of freedom of the black hole. We found that the number density suffers a sudden change accompanied by a latent heat when the black hole system crosses the small-large black hole coexistence curve, while when the system passes the critical point, it encounters a second-order phase transition with a vanishing latent heat due to the continuous change of the number density. Moreover, the thermodynamic scalar curvature suggests that there is a weak attractive interaction between two black hole molecules. These phenomena might cast new insight into the underlying microscopic structure of a charged anti-de Sitter black hole.

  3. Binding and activation of N2O at transition-metal centers: recent mechanistic insights.

    PubMed

    Tolman, William B

    2010-02-01

    No laughing matter, nitrous oxide's role in stratospheric ozone depletion and as a greenhouse gas has stimulated great interest in developing and understanding its decomposition, particularly through the use of transition-metal promoters. Recent advances in our understanding of the reaction pathways for N(2)O reduction by metal ions in the gas phase and in heterogeneous, homogeneous, and biological catalytic systems have provided provocative ideas about the structure and properties of metal N(2)O adducts and derived intermediates. These ideas are likely to inform efforts to design more effective catalysts for N(2)O remediation. PMID:20058284

  4. Exploring sustainability transitions in households: insights from real-life experiments

    NASA Astrophysics Data System (ADS)

    Baedeker, Carolin; Buhl, Johannes; Greiff, Kathrin; Hasselkuß, Marco; Liedtke, Christa; Lukas, Melanie

    2016-04-01

    Societal transformation towards sustainable consumption and production, especially in urban areas, is a key challenge. The design and implementation of sustainable product service systems (PSS) might be the initial point, in which private households play a major role. The Sustainable LivingLab research infrastructure was developed as an experimental setting for investigating consumption and production patterns in private households, especially to explore socio-technical innovations which are helpful to guide sustainability transitions. The suggested presentation describes results of several real-life experiments conducted in German households, e.g. the project SusLabNRW (North-Rhine Westphalia as part of the European SusLabNWE-Project), the EnerTransRuhr project as well as the PATHWAYS project that explore patterns of action, time use, social practices and the related resource use in private households. The presentation gives an overview of the employed methods and analysed data (qualitative interviews, social network analysis, survey on household activities and inventories and a sustainability assessment (resource profiles - MIPS household analysis). Households' resource consumption was calculated in all fields of activity to analyse social practices' impact. The presentation illustrates how aggregated data can inform scenario analysis and concludes with an outlook onto transition pathways at household level and socio-technical innovations in the fields of housing, nutrition and mobility.

  5. Interaction of carbon monoxide with transition metals: evolutionary insights into drug target discovery.

    PubMed

    Foresti, Roberta; Motterlini, Roberto

    2010-12-01

    The perception that carbon monoxide (CO) is poisonous and life-threatening for mammalian organisms stems from its intrinsic propensity to bind iron in hemoglobin, a reaction that ultimately leads to impaired oxygen delivery to tissues. From evolutionary and chemical perspectives, however, CO is one of the most essential molecules in the formation of biological components and its interaction with transition metals is at the origin of primordial cell signaling. Not surprisingly, mammals have gradually evolved systems to finely control the synthesis and the sensing of this gaseous molecule. Cells are indeed continuously exposed to small quantities of CO produced endogenously during the degradation of heme by constitutive and inducible heme oxygenase enzymes. We have gradually learnt that heme oxygenase-derived carbon monoxide (CO) serves as a ubiquitous signaling mediator which could be exploited for therapeutic purposes. The development of transition metal carbonyls as prototypic carbon monoxide-releasing molecules (CO-RMs) represents a novel stratagem for a safer delivery of CO-based pharmaceuticals in the treatment of various pathological disorders. This review will look back at evolution to analyze and argue that a dynamic interaction of CO with specific intracellular metal centers is the common denominator for the diversified beneficial effects mediated by this gaseous molecule. PMID:20704543

  6. The peptide-receptive transition state of MHC-1 molecules: Insight from structure and molecular dynamics

    SciTech Connect

    Robinson H.; Mage, M.; Dolan, M.; Wang, R.; Boyd, L.; Revilleza, M.; Natarajan, K.; Myers, N.; Hansen, T.; Margulies, D.

    2012-05-01

    MHC class I (MHC-I) proteins of the adaptive immune system require antigenic peptides for maintenance of mature conformation and immune function via specific recognition by MHC-I-restricted CD8(+) T lymphocytes. New MHC-I molecules in the endoplasmic reticulum are held by chaperones in a peptide-receptive (PR) transition state pending release by tightly binding peptides. In this study, we show, by crystallographic, docking, and molecular dynamics methods, dramatic movement of a hinged unit containing a conserved 3(10) helix that flips from an exposed 'open' position in the PR transition state to a 'closed' position with buried hydrophobic side chains in the peptide-loaded mature molecule. Crystallography of hinged unit residues 46-53 of murine H-2L(d) MHC-I H chain, complexed with mAb 64-3-7, demonstrates solvent exposure of these residues in the PR conformation. Docking and molecular dynamics predict how this segment moves to help form the A and B pockets crucial for the tight peptide binding needed for stability of the mature peptide-loaded conformation, chaperone dissociation, and Ag presentation.

  7. Insights into the structural nature of the transition state in the Kir channel gating pathway.

    PubMed

    Fowler, Philip W; Bollepalli, Murali K; Rapedius, Markus; Nematian-Ardestani, Ehsan; Shang, Lijun; Sansom, Mark Sp; Tucker, Stephen J; Baukrowitz, Thomas

    2014-01-01

    In a previous study we identified an extensive gating network within the inwardly rectifying Kir1.1 (ROMK) channel by combining systematic scanning mutagenesis and functional analysis with structural models of the channel in the closed, pre-open and open states. This extensive network appeared to stabilize the open and pre-open states, but the network fragmented upon channel closure. In this study we have analyzed the gating kinetics of different mutations within key parts of this gating network. These results suggest that the structure of the transition state (TS), which connects the pre-open and closed states of the channel, more closely resembles the structure of the pre-open state. Furthermore, the G-loop, which occurs at the center of this extensive gating network, appears to become unstructured in the TS because mutations within this region have a 'catalytic' effect upon the channel gating kinetics. PMID:25483285

  8. Insights into the structural nature of the transition state in the Kir channel gating pathway

    PubMed Central

    Fowler, Philip W; Bollepalli, Murali K; Rapedius, Markus; Nematian-Ardestani, Ehsan; Shang, Lijun; Sansom, Mark SP; Tucker, Stephen J; Baukrowitz, Thomas

    2014-01-01

    In a previous study we identified an extensive gating network within the inwardly rectifying Kir1.1 (ROMK) channel by combining systematic scanning mutagenesis and functional analysis with structural models of the channel in the closed, pre-open and open states. This extensive network appeared to stabilize the open and pre-open states, but the network fragmented upon channel closure. In this study we have analyzed the gating kinetics of different mutations within key parts of this gating network. These results suggest that the structure of the transition state (TS), which connects the pre-open and closed states of the channel, more closely resembles the structure of the pre-open state. Furthermore, the G-loop, which occurs at the center of this extensive gating network, appears to become unstructured in the TS because mutations within this region have a ‘catalytic’ effect upon the channel gating kinetics. PMID:25483285

  9. Controllable transition of silk fibroin nanostructures: an insight into in vitro silk self-assembly process.

    PubMed

    Bai, S; Liu, S; Zhang, C; Xu, W; Lu, Q; Han, H; Kaplan, D L; Zhu, H

    2013-08-01

    Silk fiber is one of the strongest and toughest biological materials with hierarchical structures, where nanofibril with size <20nm is a critical factor in determining its excellent mechanical properties. Although silk nanofibrils have been found in natural and regenerated silk solutions, there is no way to actively control nanofibril formation in aqueous solution. This study shows a simple but effective method of preparing silk nanofibrils by regulating the silk self-assembly process. Through a repeated drying-dissolving process, a silk fibroin solution composed of metastable nanoparticles was first prepared and then used to reassemble nanofibrils with different sizes and secondary conformations under various temperatures and concentrations. These nanofibrils have a similar size to that of natural fibers, providing a suitable unit to further assemble the hierarchical structure in vitro. Several important issues, such as the relationships between silk nanofibrils, secondary conformations and viscosity, are also investigated, giving a new insight into the self-assembly process. In summary, besides rebuilding silk nanofibrils in aqueous solution, this study provides an important model for furthering the understanding of silk structures, properties and forming mechanisms, making it possible to regenerate silk materials with exceptional properties in the future. PMID:23628774

  10. Photoluminescence of deep defects involving transition metals in silicon -- New insights from highly enriched 28Si

    NASA Astrophysics Data System (ADS)

    Steger, Michael

    The fundamental properties of deep luminescence centres in Si associated with transition metals such as Cu, Ag, Au, and Pt have been studied for decades, both as markers for these deleterious contaminants, as well as for the possibility of efficient Si-based light emission. Due to the high diffusivity and solubility of these metals, these are among the most ubiquitous luminescence centres observed in Si, and have thus served as testbeds for elucidating the physics of isoelectronic bound excitons and for testing ab-initio calculations of defect properties. While these deep isoelectronic bound exciton centres have been studied extensively with many different methods, the actual composition of most centres could not be determined with certainty. Only the recent availability of high quality, highly enriched 28Si made it possible to advance the knowledge of the constituents of these complexes. The greatly improved spectral resolution resulting from the elimination of inhomogeneous isotope broadening in isotopically enriched 28Si enabled the extension of the established technique of observing isotope shifts to the measurement of isotopic fingerprints. These isotopic fingerprints reveal not only the presence of a specific element, but also the number of atoms of that element involved in the formation of a given luminescence centre. This technique has revealed that the detailed constituents of all of the centres previously studied had been identified incorrectly. In this work, the results of ultra-high resolution photoluminescence studies of these centres in specially prepared 28Si samples are discussed. In addition, new centres were discovered revealing the existence of several different families of impurity complexes containing either four or five atoms chosen from Li, Cu, Ag, Au, and Pt. The constituents of all these centres have been determined, together with no-phonon transition energies, no-phonon isotope shifts, local vibrational mode energies, and the isotope

  11. Experimental insights into the magma-hydrothermal transition in the middle and lower crust

    NASA Astrophysics Data System (ADS)

    Manning, C. E.

    2012-12-01

    Magma-hydrothermal systems are sites of major heat and mass transfer in the brittle upper crust. Magmas also stall and crystallize in the middle and lower crust, and they may generate such systems in these deeper environments as well. However, the nature of the fluid phase at the transition from magmatic to hydrothermal system differs substantially in shallow vs. deep systems. In the brittle upper crust, fluids tend to be relatively dilute, and solutes are dominated by ions, ion pairs and monomeric species. In contrast, near-solidus fluids of the deeper crust are dominated by extensive aluminosilicate polymerization in the aqueous phase. For example, at 1 GPa (~35 km depth) minimum hydrous melting of albite + paragonite + quartz is at 635±5 °C. With increasing subsolidus T from 350-620 °C, bulk solubility of the mineral assemblage increases from ~1 to ~8 wt% oxides, fluids are slightly peralkaline, and Si/(Na+Al) >> 1.5 (molar). Strong, progressive solubility increase from 500-620 °C points to increasing abundance of aqueous Si, Al-Si, and Na-Al-Si polymers which comprise >80% of total dissolved solids at the melting point. Slightly subsolidus experiments at 1 GPa, 700 °C, on K-feldspar + quartz + muscovite + H2O show that the concentration of aqueous aluminosilicate polymers is even greater in fluids in this model system. Mineral solubility is further enhanced by addition of NaCl and/or KCl. For example, solubility of Al2O3 in H2O saturated with quartz or Ab melt rises with NaCl concentration, in part due to incorporation of Al into polymeric species. Moreover, the haplogranite minimum melting temperature increases more strongly with dissolved salt than with the same concentration of CO2, and dP/dT of minimum melting isoactivity surfaces is strongly positive. Thus, rising granitic magmas may be fluid saturated and even increase their melting capacity with decompression. This implies greater melt productivity and fluid saturation in some cases of mid

  12. Catching spiral - S0 transition in groups. Insights from SPH simulations with chemo-photometric implementation

    NASA Astrophysics Data System (ADS)

    Mazzei, P.; Marino, A.; Rampazzo, R.; Galletta, G.; Bettoni, D.

    2014-03-01

    We are investigating the co-evolution of galaxies within groups combining multi-wavelength photometric and 2D kinematical observations. Here we focus on S0s showing star formation in ring/arm-like structures. We use smooth particle hydrodynamical simulations (SPH) with chemo-photometric implementation which provide dynamical and morphological information together with the spectral energy distribution (SED) at each evolutionary stage. As test cases, we simulate the evolution of two such S0s: NGC 1533 and NGC 3626. The merging of two halos with mass ratio 2:1, initially just composed of DM and gas, well match their observed SEDs, their surface brightness profiles and their overall kinematics. The residual star formation today “rejuvenating” the ring/arm like structures in these S0s is then a mere consequence of a major merger, i.e. this is a phase during the merger episode. The peculiar kinematical features, e.g. gas-stars counter rotation in NGC 3626, depends on the halos initial impact parameters. Furthermore, our simulations allow to follow, in a fully consistent way, the transition of these S0s through the green valley in the NUV-r vs. Mr colour magnitude diagram, which they cross in about 3-5 Gyrs, before reaching their current position in the red sequence. We conclude that a viable mechanism driving the evolution of S0s in groups is of gravitational origin.

  13. New insights into the transport processes controlling the sulfate-methane-transition-zone near methane vents

    NASA Astrophysics Data System (ADS)

    Sultan, Nabil; Garziglia, Sébastien; Ruffine, Livio

    2016-05-01

    Over the past years, several studies have raised concerns about the possible interactions between methane hydrate decomposition and external change. To carry out such an investigation, it is essential to characterize the baseline dynamics of gas hydrate systems related to natural geological and sedimentary processes. This is usually treated through the analysis of sulfate-reduction coupled to anaerobic oxidation of methane (AOM). Here, we model sulfate reduction coupled with AOM as a two-dimensional (2D) problem including, advective and diffusive transport. This is applied to a case study from a deep-water site off Nigeria’s coast where lateral methane advection through turbidite layers was suspected. We show by analyzing the acquired data in combination with computational modeling that a two-dimensional approach is able to accurately describe the recent past dynamics of such a complex natural system. Our results show that the sulfate-methane-transition-zone (SMTZ) is not a vertical barrier for dissolved sulfate and methane. We also show that such a modeling is able to assess short timescale variations in the order of decades to centuries.

  14. New insights into the transport processes controlling the sulfate-methane-transition-zone near methane vents.

    PubMed

    Sultan, Nabil; Garziglia, Sébastien; Ruffine, Livio

    2016-05-27

    Over the past years, several studies have raised concerns about the possible interactions between methane hydrate decomposition and external change. To carry out such an investigation, it is essential to characterize the baseline dynamics of gas hydrate systems related to natural geological and sedimentary processes. This is usually treated through the analysis of sulfate-reduction coupled to anaerobic oxidation of methane (AOM). Here, we model sulfate reduction coupled with AOM as a two-dimensional (2D) problem including, advective and diffusive transport. This is applied to a case study from a deep-water site off Nigeria's coast where lateral methane advection through turbidite layers was suspected. We show by analyzing the acquired data in combination with computational modeling that a two-dimensional approach is able to accurately describe the recent past dynamics of such a complex natural system. Our results show that the sulfate-methane-transition-zone (SMTZ) is not a vertical barrier for dissolved sulfate and methane. We also show that such a modeling is able to assess short timescale variations in the order of decades to centuries.

  15. Molecular dynamics insight to phase transition in n-alkanes with carbon nanofillers

    SciTech Connect

    Rastogi, Monisha; Vaish, Rahul

    2015-05-15

    The present work aims to investigate the phase transition, dispersion and diffusion behavior of nanocomposites of carbon nanotube (CNT) and straight chain alkanes. These materials are potential candidates for organic phase change materials(PCMs) and have attracted flurry of research recently. Accurate experimental evaluation of the mass, thermal and transport properties of such composites is both difficult as well as economically taxing. Additionally it is crucial to understand the factors that results in modification or enhancement of their characteristic at atomic or molecular level. Classical molecular dynamics approach has been extended to elucidate the same. Bulk atomistic models have been generated and subjected to rigorous multistage equilibration. To reaffirm the approach, both canonical and constant-temperature, constant- pressure ensembles were employed to simulate the models under consideration. Explicit determination of kinetic, potential, non-bond and total energy assisted in understanding the enhanced thermal and transport property of the nanocomposites from molecular point of view. Crucial parameters including mean square displacement and simulated self diffusion coefficient precisely define the balance of the thermodynamic and hydrodynamic interactions. Radial distribution function also reflected the density variation, strength and mobility of the nanocomposites. It is expected that CNT functionalization could improve the dispersion within n-alkane matrix. This would further ameliorate the mass and thermal properties of the composite. Additionally, the determined density was in good agreement with experimental data. Thus, molecular dynamics can be utilized as a high throughput technique for theoretical investigation of nanocomposites PCMs.

  16. Molecular dynamics insight to phase transition in n-alkanes with carbon nanofillers

    NASA Astrophysics Data System (ADS)

    Rastogi, Monisha; Vaish, Rahul

    2015-05-01

    The present work aims to investigate the phase transition, dispersion and diffusion behavior of nanocomposites of carbon nanotube (CNT) and straight chain alkanes. These materials are potential candidates for organic phase change materials(PCMs) and have attracted flurry of research recently. Accurate experimental evaluation of the mass, thermal and transport properties of such composites is both difficult as well as economically taxing. Additionally it is crucial to understand the factors that results in modification or enhancement of their characteristic at atomic or molecular level. Classical molecular dynamics approach has been extended to elucidate the same. Bulk atomistic models have been generated and subjected to rigorous multistage equilibration. To reaffirm the approach, both canonical and constant-temperature, constant- pressure ensembles were employed to simulate the models under consideration. Explicit determination of kinetic, potential, non-bond and total energy assisted in understanding the enhanced thermal and transport property of the nanocomposites from molecular point of view. Crucial parameters including mean square displacement and simulated self diffusion coefficient precisely define the balance of the thermodynamic and hydrodynamic interactions. Radial distribution function also reflected the density variation, strength and mobility of the nanocomposites. It is expected that CNT functionalization could improve the dispersion within n-alkane matrix. This would further ameliorate the mass and thermal properties of the composite. Additionally, the determined density was in good agreement with experimental data. Thus, molecular dynamics can be utilized as a high throughput technique for theoretical investigation of nanocomposites PCMs.

  17. New insights into the transport processes controlling the sulfate-methane-transition-zone near methane vents

    PubMed Central

    Sultan, Nabil; Garziglia, Sébastien; Ruffine, Livio

    2016-01-01

    Over the past years, several studies have raised concerns about the possible interactions between methane hydrate decomposition and external change. To carry out such an investigation, it is essential to characterize the baseline dynamics of gas hydrate systems related to natural geological and sedimentary processes. This is usually treated through the analysis of sulfate-reduction coupled to anaerobic oxidation of methane (AOM). Here, we model sulfate reduction coupled with AOM as a two-dimensional (2D) problem including, advective and diffusive transport. This is applied to a case study from a deep-water site off Nigeria’s coast where lateral methane advection through turbidite layers was suspected. We show by analyzing the acquired data in combination with computational modeling that a two-dimensional approach is able to accurately describe the recent past dynamics of such a complex natural system. Our results show that the sulfate-methane-transition-zone (SMTZ) is not a vertical barrier for dissolved sulfate and methane. We also show that such a modeling is able to assess short timescale variations in the order of decades to centuries. PMID:27230887

  18. New insights into the transport processes controlling the sulfate-methane-transition-zone near methane vents.

    PubMed

    Sultan, Nabil; Garziglia, Sébastien; Ruffine, Livio

    2016-01-01

    Over the past years, several studies have raised concerns about the possible interactions between methane hydrate decomposition and external change. To carry out such an investigation, it is essential to characterize the baseline dynamics of gas hydrate systems related to natural geological and sedimentary processes. This is usually treated through the analysis of sulfate-reduction coupled to anaerobic oxidation of methane (AOM). Here, we model sulfate reduction coupled with AOM as a two-dimensional (2D) problem including, advective and diffusive transport. This is applied to a case study from a deep-water site off Nigeria's coast where lateral methane advection through turbidite layers was suspected. We show by analyzing the acquired data in combination with computational modeling that a two-dimensional approach is able to accurately describe the recent past dynamics of such a complex natural system. Our results show that the sulfate-methane-transition-zone (SMTZ) is not a vertical barrier for dissolved sulfate and methane. We also show that such a modeling is able to assess short timescale variations in the order of decades to centuries. PMID:27230887

  19. Along-axis transition between narrow and wide rifts: Insights from 3D numerical experiments

    NASA Astrophysics Data System (ADS)

    Koptev, Alexander; Calais, Eric; Burov, Evgueni; Leroy, Sylvie; Gerya, Taras

    2016-04-01

    Based on performed high-resolution rheologically consistent three-dimensional thermo-mechanical numerical models, we show that there is a significant difference in the influence of the rheological profile on rifting style in the case of dominant active (plume-activated) rifting compared to dominant passive (far-field tectonic stresses) rifting. Narrow rifting, conventionally attributed to cold strong lithosphere in passive rifting mode, may develop in weak hot ultra-stretched lithosphere during active rifting, after plume impingement on a tectonically pre-stressed lithosphere. In that case, initially ultra-wide small-amplitude rift patterns focus, in a few Myr, in large-scale faults that form a narrow rift. Also, wide rifting may develop during ultra-slow spreading of strong lithosphere, and "switch" to the narrow rifting upon plume impingement. For further understanding the mechanisms behind the interactions between the mantle plume and far-field stresses in case of realistic horizontally heterogeneous lithosphere, we have tested our models on the case of the central East African Rift system (EARS). The EARS south of the Ethiopian Rift Valley bifurcates in two branches (eastern, magma-rich and western, magma-poor) surrounding the strong Tanzanian craton. Broad zones of low seismic velocity observed throughout the upper mantle beneath the central part of the EARS are consistent with the spreading of a deep mantle plume. The extensional features and topographic expression of the Eastern rift varies significantly north-southward: in northern Kenya the area of deformation is very wide (some 150-250 km in E-W direction), to the south the rift narrows to 60-70 km, yet further to the south this localized deformation widens again. Here we investigate this transition between localized and wide rifting using thermo-mechanical numerical modeling that couples, in a dynamic sense, the rise of the upper mantle material with the deformation of the African lithosphere below the

  20. Increased Alpha (8-12 Hz) Activity during Slow Wave Sleep as a Marker for the Transition from Implicit Knowledge to Explicit Insight

    ERIC Educational Resources Information Center

    Yordanova, Juliana; Kolev, Vasil; Wagner, Ullrich; Born, Jan; Verleger, Rolf

    2012-01-01

    The number reduction task (NRT) allows us to study the transition from implicit knowledge of hidden task regularities to explicit insight into these regularities. To identify sleep-associated neurophysiological indicators of this restructuring of knowledge representations, we measured frequency-specific power of EEG while participants slept during…

  1. Transitions.

    ERIC Educational Resources Information Center

    Field, David; And Others

    1992-01-01

    Includes four articles: "Career Aspirations" (Field); "Making the Transition to a New Curriculum" (Baker, Householder); "How about a 'Work to School' Transition?" (Glasberg); and "Technological Improvisation: Bringing CNC to Woodworking" (Charles, McDuffie). (SK)

  2. Lateral Versus Vertical Growth of Two-Dimensional Layered Transition-Metal Dichalcogenides: Thermodynamic Insight into MoS2.

    PubMed

    Shang, Shun-Li; Lindwall, Greta; Wang, Yi; Redwing, Joan M; Anderson, Tim; Liu, Zi-Kui

    2016-09-14

    Unprecedented interest has been spurred recently in two-dimensional (2D) layered transition metal dichalcogenides (TMDs) that possess tunable electronic and optical properties. However, synthesis of a wafer-scale TMD thin film with controlled layers and homogeneity remains highly challenging due mainly to the lack of thermodynamic and diffusion knowledge, which can be used to understand and design process conditions, but falls far behind the rapidly growing TMD field. Here, an integrated density functional theory (DFT) and calculation of phase diagram (CALPHAD) modeling approach is employed to provide thermodynamic insight into lateral versus vertical growth of the prototypical 2D material MoS2. Various DFT energies are predicted from the layer-dependent MoS2, 2D flake-size related mono- and bilayer MoS2, to Mo and S migrations with and without graphene and sapphire substrates, thus shedding light on the factors that control lateral versus vertical growth of 2D islands. For example, the monolayer MoS2 flake in a small 2D lateral size is thermodynamically favorable with respect to the bilayer counterpart, indicating the monolayer preference during the initial stage of nucleation; while the bilayer MoS2 flake becomes stable with increasing 2D lateral size. The critical 2D flake-size of phase stability between mono- and bilayer MoS2 is adjustable via the choice of substrate. In terms of DFT energies and CALPHAD modeling, the size dependent pressure-temperature-composition (P-T-x) growth windows are predicted for MoS2, indicating that the formation of MoS2 flake with reduced size appears in the middle but close to the lower T and higher P "Gas + MoS2" phase region. It further suggests that Mo diffusion is a controlling factor for MoS2 growth owing to its extremely low diffusivity compared to that of sulfur. Calculated MoS2 energies, Mo and S diffusivities, and size-dependent P-T-x growth windows are in good accord with available experiments, and the present data

  3. New Mechanistic Insights on the Selectivity of Transition-Metal-Catalyzed Organic Reactions: The Role of Computational Chemistry.

    PubMed

    Zhang, Xinhao; Chung, Lung Wa; Wu, Yun-Dong

    2016-06-21

    With new advances in theoretical methods and increased computational power, applications of computational chemistry are becoming practical and routine in many fields of chemistry. In organic chemistry, computational chemistry plays an indispensable role in elucidating reaction mechanisms and the origins of various selectivities, such as chemo-, regio-, and stereoselectivities. Consequently, mechanistic understanding improves synthesis and assists in the rational design of new catalysts. In this Account, we present some of our recent works to illustrate how computational chemistry provides new mechanistic insights for improvement of the selectivities of several organic reactions. These examples include not only explanations for the existing experimental observations, but also predictions which were subsequently verified experimentally. This Account consists of three sections discuss three different kinds of selectivities. The first section discusses the regio- and stereoselectivities of hydrosilylations of alkynes, mainly catalyzed by [Cp*Ru(MeCN)3](+) or [CpRu(MeCN)3](+). Calculations suggest a new mechanism that involves a key ruthenacyclopropene intermediate. This mechanism not only explains the unusual Markovnikov regio-selectivity and anti-addition stereoselectivity observed by Trost and co-workers, but also motivated further experimental investigations. New intriguing experimental observations and further theoretical studies led to an extension of the reaction mechanism. The second section includes three cases of meta-selective C-H activation of aryl compounds. In the case of Cu-catalyzed selective meta-C-H activation of aniline, a new mechanism that involves a Cu(III)-Ar-mediated Heck-like transition state, in which the Ar group acts as an electrophile, was proposed. This mechanism predicted a higher reactivity for more electron-deficient Ar groups, which was supported by experiments. For two template-mediated, meta-selective C-H bond activations catalyzed by

  4. New Mechanistic Insights on the Selectivity of Transition-Metal-Catalyzed Organic Reactions: The Role of Computational Chemistry.

    PubMed

    Zhang, Xinhao; Chung, Lung Wa; Wu, Yun-Dong

    2016-06-21

    With new advances in theoretical methods and increased computational power, applications of computational chemistry are becoming practical and routine in many fields of chemistry. In organic chemistry, computational chemistry plays an indispensable role in elucidating reaction mechanisms and the origins of various selectivities, such as chemo-, regio-, and stereoselectivities. Consequently, mechanistic understanding improves synthesis and assists in the rational design of new catalysts. In this Account, we present some of our recent works to illustrate how computational chemistry provides new mechanistic insights for improvement of the selectivities of several organic reactions. These examples include not only explanations for the existing experimental observations, but also predictions which were subsequently verified experimentally. This Account consists of three sections discuss three different kinds of selectivities. The first section discusses the regio- and stereoselectivities of hydrosilylations of alkynes, mainly catalyzed by [Cp*Ru(MeCN)3](+) or [CpRu(MeCN)3](+). Calculations suggest a new mechanism that involves a key ruthenacyclopropene intermediate. This mechanism not only explains the unusual Markovnikov regio-selectivity and anti-addition stereoselectivity observed by Trost and co-workers, but also motivated further experimental investigations. New intriguing experimental observations and further theoretical studies led to an extension of the reaction mechanism. The second section includes three cases of meta-selective C-H activation of aryl compounds. In the case of Cu-catalyzed selective meta-C-H activation of aniline, a new mechanism that involves a Cu(III)-Ar-mediated Heck-like transition state, in which the Ar group acts as an electrophile, was proposed. This mechanism predicted a higher reactivity for more electron-deficient Ar groups, which was supported by experiments. For two template-mediated, meta-selective C-H bond activations catalyzed by

  5. Lateral Versus Vertical Growth of Two-Dimensional Layered Transition-Metal Dichalcogenides: Thermodynamic Insight into MoS2.

    PubMed

    Shang, Shun-Li; Lindwall, Greta; Wang, Yi; Redwing, Joan M; Anderson, Tim; Liu, Zi-Kui

    2016-09-14

    Unprecedented interest has been spurred recently in two-dimensional (2D) layered transition metal dichalcogenides (TMDs) that possess tunable electronic and optical properties. However, synthesis of a wafer-scale TMD thin film with controlled layers and homogeneity remains highly challenging due mainly to the lack of thermodynamic and diffusion knowledge, which can be used to understand and design process conditions, but falls far behind the rapidly growing TMD field. Here, an integrated density functional theory (DFT) and calculation of phase diagram (CALPHAD) modeling approach is employed to provide thermodynamic insight into lateral versus vertical growth of the prototypical 2D material MoS2. Various DFT energies are predicted from the layer-dependent MoS2, 2D flake-size related mono- and bilayer MoS2, to Mo and S migrations with and without graphene and sapphire substrates, thus shedding light on the factors that control lateral versus vertical growth of 2D islands. For example, the monolayer MoS2 flake in a small 2D lateral size is thermodynamically favorable with respect to the bilayer counterpart, indicating the monolayer preference during the initial stage of nucleation; while the bilayer MoS2 flake becomes stable with increasing 2D lateral size. The critical 2D flake-size of phase stability between mono- and bilayer MoS2 is adjustable via the choice of substrate. In terms of DFT energies and CALPHAD modeling, the size dependent pressure-temperature-composition (P-T-x) growth windows are predicted for MoS2, indicating that the formation of MoS2 flake with reduced size appears in the middle but close to the lower T and higher P "Gas + MoS2" phase region. It further suggests that Mo diffusion is a controlling factor for MoS2 growth owing to its extremely low diffusivity compared to that of sulfur. Calculated MoS2 energies, Mo and S diffusivities, and size-dependent P-T-x growth windows are in good accord with available experiments, and the present data

  6. Transits

    NASA Astrophysics Data System (ADS)

    Gilliland, Ronald L.

    Transits of the planets Mercury and especially Venus have been exciting events in the development of astronomy over the past few hundred years. Just two years ago the first transiting extra-solar planet, HD 209458b, was discovered, and subsequent studies during transit have contributed fundamental new knowledge. From the photometric light curve during transit one obtains a basic confirmation that the radial velocity detected object is indeed a planet by allowing precise determination of its mass and radius relative to these stellar quantities. From study of spectroscopic changes during transit it has been possible to probe for individual components of the transiting planets atmosphere. Planet transits are likely to become a primary tool for detection of new planets, especially other Earth-like planets with the Kepler Discovery Mission. Looking ahead, the additional aperture of the James Webb Space Space Telescope promises to allow the first possibility of studying the atmosphere of extra-solar Earth-analogue planets, perhaps even providing the first evidence of direct relevance to the search for signs of life on other planets.

  7. Insights into the Effects of Zinc Doping on Structural Phase Transition of P2-Type Sodium Nickel Manganese Oxide Cathodes for High-Energy Sodium Ion Batteries.

    PubMed

    Wu, Xuehang; Xu, Gui-Liang; Zhong, Guiming; Gong, Zhengliang; McDonald, Matthew J; Zheng, Shiyao; Fu, Riqiang; Chen, Zonghai; Amine, Khalil; Yang, Yong

    2016-08-31

    P2-type sodium nickel manganese oxide-based cathode materials with higher energy densities are prime candidates for applications in rechargeable sodium ion batteries. A systematic study combining in situ high energy X-ray diffraction (HEXRD), ex situ X-ray absorption fine spectroscopy (XAFS), transmission electron microscopy (TEM), and solid-state nuclear magnetic resonance (SS-NMR) techniques was carried out to gain a deep insight into the structural evolution of P2-Na0.66Ni0.33-xZnxMn0.67O2 (x = 0, 0.07) during cycling. In situ HEXRD and ex situ TEM measurements indicate that an irreversible phase transition occurs upon sodium insertion-extraction of Na0.66Ni0.33Mn0.67O2. Zinc doping of this system results in a high structural reversibility. XAFS measurements indicate that both materials are almost completely dependent on the Ni(4+)/Ni(3+)/Ni(2+) redox couple to provide charge/discharge capacity. SS-NMR measurements indicate that both reversible and irreversible migration of transition metal ions into the sodium layer occurs in the material at the fully charged state. The irreversible migration of transition metal ions triggers a structural distortion, leading to the observed capacity and voltage fading. Our results allow a new understanding of the importance of improving the stability of transition metal layers.

  8. Structural Insights into the Calcium-Mediated Allosteric Transition in the C-Terminal Domain of Calmodulin from Nuclear Magnetic Resonance Measurements.

    PubMed

    Kukic, Predrag; Lundström, Patrik; Camilloni, Carlo; Evenäs, Johan; Akke, Mikael; Vendruscolo, Michele

    2016-01-12

    Calmodulin is a two-domain signaling protein that becomes activated upon binding cooperatively two pairs of calcium ions, leading to large-scale conformational changes that expose its binding site. Despite significant advances in understanding the structural biology of calmodulin functions, the mechanistic details of the conformational transition between closed and open states have remained unclear. To investigate this transition, we used a combination of molecular dynamics simulations and nuclear magnetic resonance (NMR) experiments on the Ca(2+)-saturated E140Q C-terminal domain variant. Using chemical shift restraints in replica-averaged metadynamics simulations, we obtained a high-resolution structural ensemble consisting of two conformational states and validated such an ensemble against three independent experimental data sets, namely, interproton nuclear Overhauser enhancements, (15)N order parameters, and chemical shift differences between the exchanging states. Through a detailed analysis of this structural ensemble and of the corresponding statistical weights, we characterized a calcium-mediated conformational transition whereby the coordination of Ca(2+) by just one oxygen of the bidentate ligand E140 triggers a concerted movement of the two EF-hands that exposes the target binding site. This analysis provides atomistic insights into a possible Ca(2+)-mediated activation mechanism of calmodulin that cannot be achieved from static structures alone or from ensemble NMR measurements of the transition between conformations.

  9. Insights into the Effects of Zinc Doping on Structural Phase Transition of P2-Type Sodium Nickel Manganese Oxide Cathodes for High-Energy Sodium Ion Batteries.

    PubMed

    Wu, Xuehang; Xu, Gui-Liang; Zhong, Guiming; Gong, Zhengliang; McDonald, Matthew J; Zheng, Shiyao; Fu, Riqiang; Chen, Zonghai; Amine, Khalil; Yang, Yong

    2016-08-31

    P2-type sodium nickel manganese oxide-based cathode materials with higher energy densities are prime candidates for applications in rechargeable sodium ion batteries. A systematic study combining in situ high energy X-ray diffraction (HEXRD), ex situ X-ray absorption fine spectroscopy (XAFS), transmission electron microscopy (TEM), and solid-state nuclear magnetic resonance (SS-NMR) techniques was carried out to gain a deep insight into the structural evolution of P2-Na0.66Ni0.33-xZnxMn0.67O2 (x = 0, 0.07) during cycling. In situ HEXRD and ex situ TEM measurements indicate that an irreversible phase transition occurs upon sodium insertion-extraction of Na0.66Ni0.33Mn0.67O2. Zinc doping of this system results in a high structural reversibility. XAFS measurements indicate that both materials are almost completely dependent on the Ni(4+)/Ni(3+)/Ni(2+) redox couple to provide charge/discharge capacity. SS-NMR measurements indicate that both reversible and irreversible migration of transition metal ions into the sodium layer occurs in the material at the fully charged state. The irreversible migration of transition metal ions triggers a structural distortion, leading to the observed capacity and voltage fading. Our results allow a new understanding of the importance of improving the stability of transition metal layers. PMID:27494351

  10. How Does Interfacial Hydration Alter during Rod to Sphere Transition in DDAB/Water/Cyclohexane Reverse Micelles? Insights from Excited State Proton Transfer and Fluorescence Anisotropy.

    PubMed

    Phukon, Aparajita; Ray, Sudipta; Sahu, Kalyanasis

    2016-07-01

    How does microscopic organization of an organized assembly alter during macroscopic structural transition? The question may be important to ascertain driving forces responsible for such transitions. Didodecyldimethylammonium bromide (DDAB)/water/cyclohexane reverse micelle is an attractive assembly that undergoes structural transition from rod to spherical shape when the amount of water loading, w0 ([water]/[surfactant]), exceeds a particular value (w0 ∼ 8). Here, we intend to investigate the effect of the morphological change upon interfacial hydration using steady-state and time-resolved fluorescence measurements. The anionic fluorophore 8-hydroxypyrene-1,3,6-trisulfonate (HPTS or pyranine) is expected to be trapped within the positively charged RM interface. The fluorophore can undergo excited-state proton transfer (ESPT) in the presence of water and, thus, is able to provide insight on the level of hydration within the interface. The ESPT process is markedly inhibited within the interface at low w0 and gradually favored with increase of w0. The time-resolved fluorescence decays could be best analyzed by assuming distribution of HPTS over two distinct interfacial regions- partly hydrated and mostly dehydrated. The relative population of the two regions varies distinctly at low w0 (<6) and high w0 (>6) regimes. Moreover, fluorescence anisotropy (steady-state and time-resolved) varies differently with respect to w0, before and after the transition point (w0 ∼ 8). PMID:27292367

  11. On the fused-to-single ring transition in 10π structures. Insights from naphthalene to [10]annulene series

    NASA Astrophysics Data System (ADS)

    Muñoz-Castro, Alvaro

    2016-04-01

    The fused-to-single-ring transition is studied through a 10πe series given the series from naphthalene to [10]annulene. Our results suggest that change occurs at certain structure instead of a gradual transition. In the transition point, given by bicyclo[7.1.0]decapentaene, similar magnetic behavior in comparison to the single ring counterpart is found. The systems can be considered to behave as a whole single aromatic structure where the fused counterparts can be treated as a modification in the aromatic path of a single ring aromatic motif, which can viewed as a useful approach to evaluate the formation of defects or larger-rings in graphene motifs.

  12. Synaptic plasticity modulates autonomous transitions between waking and sleep states: insights from a Morris-Lecar model.

    PubMed

    Ciszak, Marzena; Bellesi, Michele

    2011-12-01

    The transitions between waking and sleep states are characterized by considerable changes in neuronal firing. During waking, neurons fire tonically at irregular intervals and a desynchronized activity is observed at the electroencephalogram. This activity becomes synchronized with slow wave sleep onset when neurons start to oscillate between periods of firing (up-states) and periods of silence (down-states). Recently, it has been proposed that the connections between neurons undergo potentiation during waking, whereas they weaken during slow wave sleep. Here, we propose a dynamical model to describe basic features of the autonomous transitions between such states. We consider a network of coupled neurons in which the strength of the interactions is modulated by synaptic long term potentiation and depression, according to the spike time-dependent plasticity rule (STDP). The model shows that the enhancement of synaptic strength between neurons occurring in waking increases the propensity of the network to synchronize and, conversely, desynchronization appears when the strength of the connections become weaker. Both transitions appear spontaneously, but the transition from sleep to waking required a slight modification of the STDP rule with the introduction of a mechanism which becomes active during sleep and changes the proportion between potentiation and depression in accordance with biological data. At the neuron level, transitions from desynchronization to synchronization and vice versa can be described as a bifurcation between two different states, whose dynamical regime is modulated by synaptic strengths, thus suggesting that transition from a state to an another can be determined by quantitative differences between potentiation and depression.

  13. Synaptic plasticity modulates autonomous transitions between waking and sleep states: Insights from a Morris-Lecar model

    NASA Astrophysics Data System (ADS)

    Ciszak, Marzena; Bellesi, Michele

    2011-12-01

    The transitions between waking and sleep states are characterized by considerable changes in neuronal firing. During waking, neurons fire tonically at irregular intervals and a desynchronized activity is observed at the electroencephalogram. This activity becomes synchronized with slow wave sleep onset when neurons start to oscillate between periods of firing (up-states) and periods of silence (down-states). Recently, it has been proposed that the connections between neurons undergo potentiation during waking, whereas they weaken during slow wave sleep. Here, we propose a dynamical model to describe basic features of the autonomous transitions between such states. We consider a network of coupled neurons in which the strength of the interactions is modulated by synaptic long term potentiation and depression, according to the spike time-dependent plasticity rule (STDP). The model shows that the enhancement of synaptic strength between neurons occurring in waking increases the propensity of the network to synchronize and, conversely, desynchronization appears when the strength of the connections become weaker. Both transitions appear spontaneously, but the transition from sleep to waking required a slight modification of the STDP rule with the introduction of a mechanism which becomes active during sleep and changes the proportion between potentiation and depression in accordance with biological data. At the neuron level, transitions from desynchronization to synchronization and vice versa can be described as a bifurcation between two different states, whose dynamical regime is modulated by synaptic strengths, thus suggesting that transition from a state to an another can be determined by quantitative differences between potentiation and depression.

  14. Mechanism of Magnetostructural Transitions in Copper-Nitroxide-Based Switchable Molecular Magnets: Insights from ab Initio Quantum Chemistry Calculations.

    PubMed

    Jung, Julie; Guennic, Boris Le; Fedin, Matvey V; Ovcharenko, Victor I; Calzado, Carmen J

    2015-07-20

    The gradual magnetostructural transition in breathing crystals based on copper(II) and pyrazolyl-substituted nitronyl nitroxides has been analyzed by means of DDCI quantum chemistry calculations. The magnetic coupling constants (J) within the spin triads of Cu(hfac)2L(Bu)·0.5C8H18 have been evaluated for the X-ray structures reported at different temperatures. The coupling is strongly antiferromagnetic at low temperature and becomes ferromagnetic when the temperature increases. The intercluster magnetic coupling (J') is antiferromagnetic and shows a marked dependence on temperature. The magnetostructural transition can be reproduced using the calculated J values for each structure in the simulation of the magnetic susceptibility. However, the μ(T) curve can be improved nicely by considering the coexistence of two phases in the transition region, whose ratio varies with temperature corresponding to both the weakly and strongly coupled spin states. These results complement a recent VT-FTIR study on the parent Cu(hfac)2L(Pr) compound with a gradual magnetostructural transition.

  15. Transition metal doping of Mg2FeH6--a DFT insight into synthesis and electronic structure.

    PubMed

    Batalović, Katarina; Radaković, Jana; Belošević-Čavor, Jelena; Koteski, Vasil

    2014-06-28

    Mg2FeH6 is a promising hydrogen storage material with one of the highest volumetric hydrogen density among the known hydrogen storage materials. However, its complicated synthesis and high temperature of hydrogen desorption limit wider applications. In this paper we study the influence of transition metal (Ni, Co, Mn) doping on the structural, electronic and hydrogen sorption properties of Mg2FeH6, using first-principles density functional theory calculations. The thermodynamics of three different synthesis routes is addressed, and all of the mentioned transition metals are found to destabilize Mg2FeH6. In addition, a detailed study of electronic structure properties, including densities of states (DOS) and charge transfer analysis (AIM), reveals that the doping with Ni, Mn and Co leads to the reduction of the direct band gap of Mg2FeH6. PMID:24825440

  16. The nature of MIS 3 stadial-interstadial transitions in Europe: New insights from model-data comparisons

    NASA Astrophysics Data System (ADS)

    Van Meerbeeck, C. J.; Renssen, H.; Roche, D. M.; Wohlfarth, B.; Bohncke, S. J. P.; Bos, J. A. A.; Engels, S.; Helmens, K. F.; Sánchez-Goñi, M. F.; Svensson, A.; Vandenberghe, J.

    2011-12-01

    15 abrupt warming transitions perturbed glacial climate in Greenland during Marine Isotope Stage 3 (MIS 3, 60-27 ka BP). One hypothesis states that the 8-16 °C warming between Greenland Stadials (GS) and Interstadials (GI) was caused by enhanced heat transport to the North Atlantic region after a resumption of the Atlantic Meridional Overturning Circulation (AMOC) from a weak or shutdown stadial mode. This hypothesis also predicts warming over Europe, a prediction poorly constrained by data due to the paucity of well-dated quantitative temperature records. We therefore use a new evidence from biotic proxies and a climate model simulation to study the characteristics of a GS-GI transition in continental Europe and the link to enhanced AMOC strength. We compare reconstructed climatic and vegetation changes between a stadial and subsequent interstadial - correlated to GS15 and GI14 (˜55 ka BP) - with a simulated AMOC resumption using a three-dimensional earth system model setup with early-MIS 3 boundary conditions. Over western Europe (12°W-15°E), we simulate twice the annual precipitation, a 17 °C warmer coldest month, a 8 °C warmer warmest month, 1300 °C-day more growing degree days with baseline 5 °C (GDD5) and potential vegetation allowing tree cover after the transition. However, the combined effect of frequent killing frosts, <20 mm summer precipitation and too few GDD5 after the transition suggest a northern tree limit lying at ˜50°N during GI14. With these 3 climatic limiting factors we provide a possible explanation for the absence of forests north of 48°N during MIS 3 interstadials with mild summers. Finally, apart from a large model bias in warmest month surface air temperatures, our simulation is in reasonable agreement with reconstructed climatic and vegetation changes in Europe, thus further supporting the hypothesis.

  17. Microstructural, textural and thermal evolution of an exhumed strike-slip fault and insights into localization and rheological transition

    NASA Astrophysics Data System (ADS)

    Cao, Shuyun; Neubauer, Franz; Liu, Junlai; Bernroider, Manfred; Genser, Johann

    2016-04-01

    The presence of deep exhumed crustal rocks with a dominant but contrasting mineralogy results in shear concentration in the rheological weakest layer, which exhibits contrasting patterns of fabrics and thermal conditions during their formation. We tested a combination of methodologies including microstructural and textural investigations, geochronology and geothermometry on deformed rocks from exhumed strike-slip fault, Ailao Shan-Red River, SE, Asian. Results indicate that the exhumed deep crustal rocks since late Oligocene (ca. 28 Ma) to Pliocene (ca. 4 Ma) typically involve dynamic microstructural, textural and thermal evolution processes, which typically record a progressive deformation and syn-kinematic reactions from ductile to semi-ductile and brittle behavior during exhumation. This transformation also resulted in dramatic strength reduction that promoted strain localization along the strike-slip and transtensional faults. Detailed analysis has revealed the co-existence of microfabrics ranging from high-temperatures (granulite facies conditions) to overprinting low-temperatures (lower greenschist facies conditions). The high-temperature microstructures and textures are in part or entirely altered by subsequent, overprinting low-temperature shearing. In quartz-rich rocks, quartz was deformed in the dislocation creep regime and records transition of microfabrics and slip systems during decreasing temperature, which lasted until retrogression related to final exhumation. As a result, grain-size reduction associated by fluids circulating within the strike-slip fault zone at brittle-ductile transition leads to rock softening, which resulted in strain localization, weak rock rheology and the overall hot thermal structure of the crust. Decompression occurred during shearing and as a result of tectonic exhumation. All these results demonstrate that the ductile to ductile-brittle transition involves a combination of different deformation mechanisms, rheological

  18. Plate deformation at the transition between collision and subduction: insights from 3D thermo-mechanical laboratory experiments

    NASA Astrophysics Data System (ADS)

    Boutelier, D. A.; Cruden, A. R.; Oncken, O.

    2012-04-01

    3-D thermo-mechanical laboratory experiments of arc-continent collision investigate plate deformation at the transition between collision and subduction. Deformation in the collision area propagates into the subduction-collision transition zone via along-strike coupling of the neighboring segments of the plate boundary. The largest along-strike gradient of trench-perpendicular compression produced by a passive margin turning by 90 degrees does not generate sufficiently localized shear strain in the transition zone to cause a strike-slip system. This is because of the fast propagation of lithosphere failure in the arc area. Deformation is thus continuous along-strike, but the deformation mechanism is three-dimensional and progressive structural variations arise because the coupling between neighboring segments induces either advanced or delayed failure of the arc lithosphere and passive margin. During the initial stage of collision, the accretionary wedge is partially subducted, the interplate zone is lubricated, and shear traction drops. Thus large convergence obliquity does not produce a migrating fore-arc sliver. Instead, the fore-arc motion is due to the pressure force generated by subduction of the buoyant continental crust. It follows that convergence obliquity does not yield trench-parallel deformation of the fore-arc and its influence on the collision process is limited. However, convergence obliquity may have shaped the active margin during the stage of oceanic subduction stage, prior to collision, and inherited structures may impact the propagation mechanism.

  19. Structural Insights into Solid-to-Solid Phase Transition and Modulated Crystal Formation in Octyl-β-d-Galactoside Crystals.

    PubMed

    Ogawa, Shigesaburo; Ozaki, Yukihiro; Takahashi, Isao

    2016-09-19

    Despite the significance of synthetic monotailed β-linked galactolipids, for a detailed understanding of natural galactolipids, many aspects of these β-linked galactolipids' crystal structures such as temperature-dependence and hydration characteristics remain inadequately understood. In this manuscript, we demonstrated detailed insight of crystal characteristics of one of the simplest monotailed galactolipids, octyl-β-d-galactoside (MOβ-Gal), using thermal analyses, Fourier-transform infrared spectroscopy (FTIR), powder X-ray diffraction (PXRD) measurements and grazing-incidence wide-angle X-ray diffraction (GI-WAXD) analysis. As a result, it was revealed that the MOβ-Gal anhydrous crystal showed a continuous structural change from the high-symmetry structure to low-symmetry crystal lattice via the strengthened hydrogen bonding interaction as the temperature decreased. In addition, the hemihydrate crystal was found to be in the modulated "ribbon phase". These insights strongly suggest that β-linked galactolipids possess intrinsic characteristics necessary to form a modulated structure even in the crystal state and demonstrate the importance of the presence of tiny amounts of water as cushioning media for preventing order parameter evolution.

  20. Transitional Evolution of the Geomagnetic Field Recorded in Long Volcanic Sequences: Insights From Icelandic and Hawaiian Lavas

    NASA Astrophysics Data System (ADS)

    Lau, J. K.; Herrero-Bervera, E.; Valet, J.

    2007-12-01

    We have studied the short-term evolution of the geomagnetic field recorded by long volcanic sequences in Iceland and Hawaii. The eastern Icelandic sequences correspond to 45 and 49 individual lava flows sampled and range in age from 12.9 to 10.21 Ma as reported by Watkins and Walker [Watkins and Walker, 1977. Am J. Sci. 277, 513-584] and are labeled as profiles C and D. Also sampled were long volcanic sequences in the Waianae, Koolau (island of O"ahu) and Mauna Loa (Big Island of Hawaii) volcanoes. We have studied in detail the directional characteristics of three successive reversals, the Gilbert-Gauss, the Lower and the Upper Mammoth reversals recorded by the Waianae lavas. These results confirm that large oscillations of directions precede or follow the reversals, which shows waveforms typical of paleosecular variation with their amplitude being considerably amplified by the decrease of the dipole. There is no apparent preferred location for the virtual geomagnetic poles (VGP). In addition to the directional analyses, determinations of absolute paleointensity were attempted on more than 540 samples, which document the field variations surrounding the Lower Mammoth transition. A period of a weak field dominated before the reversal; then the transition was initiated by a transit from normal to reverse polarity followed by a short restoration of field intensity in reverse polarity. A second episode of a very weak field was accompanied by a return to positive inclinations before reaching the reverse polarity. The very strong and apparent rapid recovery of the dipole following completion of the reversal culminated at a value of 16 x 1022 Am2 similar to field intensities reported for the other detailed volcanic records of reversals studied so far. The asymmetry between the pre- and the post-reversal phases appears as a dominant characteristic and indicates the importance of field regeneration to initiate a new stable polarity interval. In addition we have obtained

  1. Transitions in eruption style at Merapi Volcano (Java, Indonesia); insights from satellite thermal infrared images and numerical modeling

    NASA Astrophysics Data System (ADS)

    Carr, B. B.; Clarke, A. B.; Vanderkluysen, L.; De'Michieli Vitturi, M.

    2012-12-01

    Merapi is a 2968 m high volcano located in the Central Java Province of Indonesia and one of the country's most active volcanoes. Episodes of andesitic dome growth are periodically interrupted by explosive eruptions, which have caused at least 429 fatalities in the last 20 years alone. We use thermal infrared (TIR) images from the Moderate Resolution Imaging Spectrometer (MODIS) and Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) instruments to measure heat flux at Merapi Volcano over the time period from 2006-2010. We also estimate effusion rates at the vent from the heat flux values using the method of Harris and Ripepe (2007, Geophys. Res. Let. 34). Our data set includes over 500 MODIS images and over 40 ASTER scenes that allow us to observe trends in heat flux at the vent over time. We produce a 5-year record of heat flux at Merapi that includes a typical Merapi-style, dome-building effusive eruption in 2006 and the explosive VEI 3-4 eruption of 2010. We are able to confirm the accuracy of heat flux measurements and effusion rate estimates from TIR data by comparison with a limited number of ground observations from the 2006 and 2010 eruptions. Our observations capture transitions in activity at Merapi from inactive to active and from effusive to explosive as well as the time scales over which these transitions occur. We use a numerical approach to model magma ascent in the volcanic conduit in order to understand factors that may have led to significant changes in eruption rate and style over this period. We constrain relevant model input and output parameters using previous petrologic, seismic, and geodetic studies of the Merapi system, and vary several critical parameters over reasonable ranges as documented in the literature. Results suggest that chamber pressure and some combination of total volatile content and rate of open-system degassing are the primary parameters controlling the observed transitions in eruption rate and style.

  2. Evaporating sessile droplet pair: Insights into contact line motion, flow transitions and emergence of universal vaporisation pattern

    NASA Astrophysics Data System (ADS)

    Shaikeea, Angkur Jyoti Dipanka; Basu, Saptarshi

    2016-06-01

    We have deciphered that the vaporization rate of a pair of sessile droplets placed in a close vicinity of each other not only gets suppressed but also approached a universal pattern in the long time asymptotic limit, irrespective of substrate hydrophobicity. In a short time, these droplets exhibit a series of naturally evolving characteristics such as alteration of evaporation modes, flow transitions, asymmetric deformation, and motion of the contact line. Such dynamics are uniquely determined by the degree of pinning. In addition, we show that the enhanced hydrophobicity does not always lead to lower evaporation rate in droplets.

  3. The nature of MIS3 stadial-interstadial transitions in Europe: new insights from model-data comparisons

    NASA Astrophysics Data System (ADS)

    van Meerbeeck, Cedric J.; Renssen, Hans; Roche, Didier M.; Wohlfarth, Barbara

    2010-05-01

    15 abrupt warming transitions perturbed glacial climate in Greenland during Marine Isotope Stage 3 (MIS3, 60-27ka BP). One hypothesis states that the 8-16°C warming between Greenland Stadials (GS) and Interstadials (GI) was caused by enhanced heat transport to the North Atlantic region after a resumption of the Atlantic Meridional Overturning Circulation (AMOC) from a weak or shutdown stadial mode. This hypothesis also predicts warming over Europe, but so far this has been poorly constrained by data due to the paucity of well-dated quantitative temperature records. We therefore use new evidence from biotic proxies and a climate model simulation to study the characteristics of a GS-GI transition in continental Europe and the link to enhanced AMOC strength. We compare reconstructed climatic and vegetation changes between a stadial and subsequent interstadial - correlated to GS15 and GI14 (~55ka BP) - with a simulated AMOC resumption using a three-dimensional earth system model set up with early-MIS3 boundary conditions. The simulated AMOC resumption results in the predicted warming in Greenland (~10°C in annual mean) and the North Atlantic Ocean (~7°C at the sea surface). Over western Europe (12°W-15°E), we simulate twice the annual precipitation, a 17°C warmer coldest month, a 8°C warmer warmest month, 1300°C-day more growing degree days with baseline 5°C (GDD5) and tree-cover potential vegetation after the transition. However, the combined effect of frequent killing frosts, <20mm summer precipitation and too few GDD5 after the transition suggest a northern tree limit lying at ~50°N during GI14. With these 3 climatic limiting factors we provide a possible explanation for the absence of forests north of 48°N during MIS3 interstadials with mild summers. Finally, apart from a large model bias in warmest month surface air temperatures, our simulation is in reasonable agreement with reconstructed climatic and vegetation changes in Europe, thus further

  4. Glaciation and erosion of Eastern Greenland at the Eocene-Oligocene transition: Insights from low-temperature thermochronology

    NASA Astrophysics Data System (ADS)

    Bernard, Thomas; Steer, Philippe; Gallagher, Kerry; Szulc, Adam; Whittam, Andrew

    2016-04-01

    Climate cooling through the Late Cenozoic was important in the evolution of glaciated mountain ranges. While the onset of accelerated Cenozoic exhumation is generally associated with the Quaternary at mid-latitudes, coincident with the local onset of glaciation, some high-latitude passive margins may have experienced earlier glaciation starting at 30-38 Ma or even 45 Ma. To address this issue, we use a set of new AFT data from 16 sub-vertical profiles sampled along the fjords of the central Eastern Greenland margin between 68° and 76° N, combined with new apatite (U-Th-Sm)/He (AHe) data from selected profiles. To infer thermal histories and exhumation from these profiles, we use the software QTQt. The modeling results show a major phase of exhumation in the East Greenland margin between 68° and 76° N starting at 30±5 Ma. The spatial distribution of the exhumation shows that normal faulting on East Greenland margin had no resolvable influence on exhumation related to the cooling phase. However, the timing is coincident with the dramatic worldwide fall of surface temperature at the Eocene-Oligocene transition. We therefore suggest that a transition from an Eocene fluvial to an Oligocene glacial-dominated landscape triggered a period of enhanced erosion. We infer from the thermal histories that around 2.7±1.9 km of erosion occurred close to the coast since the Eocene-Oligocene transition. This amount of erosion is consistent with the incision of the fjords and with the effective removal of 2.3±1.5 km of basalt thickness, deduced by the thermal modeling of a heating phase at 55±5 Ma. This phase of erosion is most strongly evidenced near the coast, suggesting either that continental ice extent was limited to the coastal areas or that erosion was less efficient outside these areas, leading to no obvious signal in thermochronometric data further north. Overall, this study provides the first onshore evidence of the onset of continental ice in East Greenland margin

  5. New insights into the transition pathway from nonspecific to specific complex of DNA with Escherichia coli integration host factor.

    PubMed

    Vivas, Paula; Kuznetsov, Serguei V; Ansari, Anjum

    2008-05-15

    To elucidate the nature of the transition-state ensemble along the reaction pathway from a nonspecific protein-DNA complex to the specific complex, we have carried out measurements of DNA bending/unbending dynamics on a cognate DNA substrate in complex with integration host factor (IHF), an architectural protein from E. coli that bends its cognate site by approximately 180 degrees . We use a laser temperature jump to perturb the IHF-DNA complex and monitor the relaxation kinetics with time-resolved FRET measurements on DNA substrates end-labeled with a FRET pair. Previously, we showed that spontaneous bending/kinking of DNA, from thermal disruption of base-pairing/-stacking interactions, may be the rate-limiting step in the formation of the specific complex (Kuznetsov, S. V.; Sugimura, S.; Vivas, P.; Crothers, D. M.; Ansari, A. Proc. Natl. Acad. Sci. USA 2006, 103, 18515). Here, we probe the effect of varying [KCl], which affects the stability of the complex, on this rate-limiting step. We find that below approximately 250 mM KCl, the observed relaxation kinetics are from the unimolecular bending/unbending of DNA, and the relaxation rate kr is independent of [KCl]. Above approximately 300 mM KCl, dissociation of the IHF-DNA complex becomes significant, and the observed relaxation process includes contributions from the association/dissociation step, with kr decreasing with increasing [KCl]. The DNA bending step occurs with a positive activation enthalpy, despite the large negative enthalpy change reported for the specific IHF-DNA complex (Holbrook, J. A.; Tsodikov, O. V.; Saecker, R. M.; Record, M. T., Jr. J. Mol. Biol. 2001, 310, 379). Our conclusion from these studies is that in the uphill climb to the transition state, the DNA is kinked, but with no release of ions, as indicated by the salt-independent behavior of k(r) at low [KCl]. Any release of ions in the unimolecular process, together with conformational changes in the protein-DNA complex that facilitate

  6. Lunar-induced reproductive patterns in transitional habitats: Insights from a Mediterranean killifish inhabiting northern Adriatic saltmarshes

    NASA Astrophysics Data System (ADS)

    Cavraro, Francesco; Varin, Cristiano; Malavasi, Stefano

    2014-02-01

    Estuaries and coastal lagoons play a key role in the functioning of coastal ecosystems and represent important natural areas for fish communities. Species living in these habitats often show specialised ecological and life history traits. The reproductive periodicity of a northern population of the Mediterranean killifish Aphanius fasciatus was assessed using the male courtship behaviour as indicator of reproductive motivation under laboratory conditions. Timing of egg development was also checked to further support the existence of a tidal-related periodicity. Using a statistical model applied to the intensity of courtship behaviour measured over a two-month period, a semilunar periodicity was revealed, with two main peaks corresponding with full moons. Both behaviours and timing of egg development were consistent with a periodicity of 14 days, suggesting that the tidal cycle drives the reproduction of A. fasciatus in Northern Adriatic saltmarshes. The findings are assessed with a comparative approach within both European and North American transitional waters.

  7. Stick-slip and creep behavior in lubricated granular material: Insights into the brittle-ductile transition

    NASA Astrophysics Data System (ADS)

    Reber, Jacqueline E.; Hayman, Nicholas W.; Lavier, Luc L.

    2014-05-01

    Crustal deformation can occur via stick-slip events, viscous creep, or strain transients at variable rates. Here we explore such strain transients with physical experiments comprising a quasi-two-dimensional shear zone with elastic, acrylic discs and interstitial viscous silicone. Experiments of solely elastic discs produce stick-slip events and an overall (constant volume) strengthening. The addition of the viscous silicone enhances localization but does not greatly change the overall pattern of strengthening. It does, however, damp the stick-slip events, leading to transient, creep-like behavior that approaches the behavior of a Maxwell body. There is no gradual transition from frictional to viscous deformation with increasing amounts of silicone, suggesting that the mixed rheology is in effect as soon as an interstitial fluid is present. Our experiments support the hypothesis that a possible cause for strain transients in nature is an interstitial viscous phase in shear zones.

  8. On the Mechanism(s) of Membrane Permeability Transition in Liver Mitochondria of Lamprey, Lampetra fluviatilis L.: Insights from Cadmium

    PubMed Central

    Belyaeva, Elena A.; Emelyanova, Larisa V.; Korotkov, Sergey M.; Brailovskaya, Irina V.; Savina, Margarita V.

    2014-01-01

    Previously we have shown that opening of the mitochondrial permeability transition pore in its low conductance state is the case in hepatocytes of the Baltic lamprey (Lampetra fluviatilis L.) during reversible metabolic depression taking place in the period of its prespawning migration when the exogenous feeding is switched off. The depression is observed in the last year of the lamprey life cycle and is conditioned by reversible mitochondrial dysfunction (mitochondrial uncoupling in winter and coupling in spring). To further elucidate the mechanism(s) of induction of the mitochondrial permeability transition pore in the lamprey liver, we used Cd2+ and Ca2+ plus Pi as the pore inducers. We found that Ca2+ plus Pi induced the high-amplitude swelling of the isolated “winter” mitochondria both in isotonic sucrose and ammonium nitrate medium while both low and high Cd2+ did not produce the mitochondrial swelling in these media. Low Cd2+ enhanced the inhibition of basal respiration rate of the “winter” mitochondria energized by NAD-dependent substrates whereas the same concentrations of the heavy metal evoked its partial stimulation on FAD-dependent substrates. The above changes produced by Cd2+ or Ca2+ plus Pi in the “winter” mitochondria were only weakly (if so) sensitive to cyclosporine A (a potent pharmacological desensitizer of the nonselective pore) added alone and they were not sensitive to dithiothreitol (a dithiol reducing agent). Under monitoring of the transmembrane potential of the “spring” lamprey liver mitochondria, we revealed that Cd2+ produced its decrease on both types of the respiratory substrates used that was strongly hampered by cyclosporine A, and the membrane potential was partially restored by dithiothreitol. The effects of different membrane permeability modulators on the lamprey liver mitochondria function and the seasonal changes in their action are discussed. PMID:24995321

  9. On the mechanism(s) of membrane permeability transition in liver mitochondria of lamprey, Lampetra fluviatilis L.: insights from cadmium.

    PubMed

    Belyaeva, Elena A; Emelyanova, Larisa V; Korotkov, Sergey M; Brailovskaya, Irina V; Savina, Margarita V

    2014-01-01

    Previously we have shown that opening of the mitochondrial permeability transition pore in its low conductance state is the case in hepatocytes of the Baltic lamprey (Lampetra fluviatilis L.) during reversible metabolic depression taking place in the period of its prespawning migration when the exogenous feeding is switched off. The depression is observed in the last year of the lamprey life cycle and is conditioned by reversible mitochondrial dysfunction (mitochondrial uncoupling in winter and coupling in spring). To further elucidate the mechanism(s) of induction of the mitochondrial permeability transition pore in the lamprey liver, we used Cd(2+) and Ca(2+) plus Pi as the pore inducers. We found that Ca(2+) plus Pi induced the high-amplitude swelling of the isolated "winter" mitochondria both in isotonic sucrose and ammonium nitrate medium while both low and high Cd(2+) did not produce the mitochondrial swelling in these media. Low Cd(2+) enhanced the inhibition of basal respiration rate of the "winter" mitochondria energized by NAD-dependent substrates whereas the same concentrations of the heavy metal evoked its partial stimulation on FAD-dependent substrates. The above changes produced by Cd(2+) or Ca(2+) plus Pi in the "winter" mitochondria were only weakly (if so) sensitive to cyclosporine A (a potent pharmacological desensitizer of the nonselective pore) added alone and they were not sensitive to dithiothreitol (a dithiol reducing agent). Under monitoring of the transmembrane potential of the "spring" lamprey liver mitochondria, we revealed that Cd(2+) produced its decrease on both types of the respiratory substrates used that was strongly hampered by cyclosporine A, and the membrane potential was partially restored by dithiothreitol. The effects of different membrane permeability modulators on the lamprey liver mitochondria function and the seasonal changes in their action are discussed.

  10. Epithelial to mesenchymal transition and the cancer stem cell phenotype: Insights from cancer biology with therapeutic implications for colorectal cancer

    PubMed Central

    Findlay, Victoria J.; Wang, Cindy; Watson, Dennis K.; Camp, E. Ramsay

    2014-01-01

    Although mortality from colorectal cancer (CRC) is decreasing, colorectal cancer is still the second highest cause of cancer related deaths in America. Chemotherapy and radiation therapy now play central roles in our strategies to fight cancer, although we continue to lack novel strategies overcoming therapeutic resistance. Molecular mechanisms of therapeutic resistance in CRC continue to be under intense investigation. In this review, we highlight the recent evidence linking epithelial-to-mesenchymal transition (EMT) with aggressive tumor biology as well as with the cancer stem cells (CSC) across multiple organ systems including colon cancer. Furthermore, in the era of neo-adjuvant treatment, the clinical implications are concerning that our treatments may have the potential to induce more aggressive cancer cells through EMT, perhaps even generating CSCs more capable of metastasis and further resistant to treatment. This concern and potential reality highlights the critical need for further understanding the impact of clinical therapy on the pathobiology of cancer and further supports the need to therapeutically target the CSC. Besides serving as potential biomarkers for aggressive tumor biology and therapeutic resistance, EMT and CSC molecular pathways may highlight novel therapeutic targets as strategies for improving the response to conventional anti-neoplastic agents translating into improved oncologic outcomes. PMID:24787239

  11. Reactions of oxygen-containing molecules on transition metal carbides: Surface science insight into potential applications in catalysis and electrocatalysis

    NASA Astrophysics Data System (ADS)

    Stottlemyer, Alan L.; Kelly, Thomas G.; Meng, Qinghe; Chen, Jingguang G.

    2012-09-01

    Historically the interest in the catalytic properties of transition metal carbides (TMC) has been inspired by their "Pt-like" properties in the transformation reactions of hydrocarbon molecules. Recent studies, however, have revealed that the reaction pathways of oxygen-containing molecules are significantly different between TMCs and Pt-group metals. Nonetheless, TMCs demonstrate intriguing catalytic properties toward oxygen-containing molecules, either as the catalyst or as the catalytically active substrate to support metal catalysts, in several important catalytic and electrocatalytic applications, including water electrolysis, alcohol electrooxidation, biomass conversion, and water gas shift reactions. In the current review we provide a summary of theoretical and experimental studies of the interaction of TMC surfaces with oxygen-containing molecules, including both inorganic (O2, H2O, CO and CO2) and organic (alcohols, aldehydes, acids and esters) molecules. We will discuss the general trends in the reaction pathways, as well as future research opportunities in surface science studies that would facilitate the utilization of TMCs as catalysts and electrocatalysts.

  12. Reactions of oxygen-containing molecules on transition metal carbides: Surface science insight into potential applications in catalysis and electrocatalysis

    NASA Astrophysics Data System (ADS)

    Stottlemyer, Alan L.; Kelly, Thomas G.; Meng, Qinghe; Chen, Jingguang G.

    2012-09-01

    Historically the interest in the catalytic properties of transition metal carbides (TMC) has been inspired by their “Pt-like” properties in the transformation reactions of hydrocarbon molecules. Recent studies, however, have revealed that the reaction pathways of oxygen-containing molecules are significantly different between TMCs and Pt-group metals. Nonetheless, TMCs demonstrate intriguing catalytic properties toward oxygen-containing molecules, either as the catalyst or as the catalytically active substrate to support metal catalysts, in several important catalytic and electrocatalytic applications, including water electrolysis, alcohol electrooxidation, biomass conversion, and water gas shift reactions. In the current review we provide a summary of theoretical and experimental studies of the interaction of TMC surfaces with oxygen-containing molecules, including both inorganic (O2, H2O, CO and CO2) and organic (alcohols, aldehydes, acids and esters) molecules. We will discuss the general trends in the reaction pathways, as well as future research opportunities in surface science studies that would facilitate the utilization of TMCs as catalysts and electrocatalysts.

  13. Experimental insights into flow impingement in cerebral aneurysm by stereoscopic particle image velocimetry: transition from a laminar regime.

    PubMed

    Yagi, Takanobu; Sato, Ayaka; Shinke, Manabu; Takahashi, Sara; Tobe, Yasutaka; Takao, Hiroyuki; Murayama, Yuichi; Umezu, Mitsuo

    2013-05-01

    This study experimentally investigated the instability of flow impingement in a cerebral aneurysm, which was speculated to promote the degradation of aneurysmal wall. A patient-specific, full-scale and elastic-wall replica of cerebral artery was fabricated from transparent silicone rubber. The geometry of the aneurysm corresponded to that found at 9 days before rupture. The flow in a replica was analysed by quantitative flow visualization (stereoscopic particle image velocimetry) in a three-dimensional, high-resolution and time-resolved manner. The mid-systolic and late-diastolic flows with a Reynolds number of 450 and 230 were compared. The temporal and spatial variations of near-wall velocity at flow impingement delineated its inherent instability at a low Reynolds number. Wall shear stress (WSS) at that site exhibited a combination of temporal fluctuation and spatial divergence. The frequency range of fluctuation was found to exceed significantly that of the heart rate. The high-frequency-fluctuating WSS appeared only during mid-systole and disappeared during late diastole. These results suggested that the flow impingement induced a transition from a laminar regime. This study demonstrated that the hydrodynamic instability of shear layer could not be neglected even at a low Reynolds number. No assumption was found to justify treating the aneurysmal haemodynamics as a fully viscous laminar flow.

  14. Quantification of active mitochondrial permeability transition pores using GNX-4975 inhibitor titrations provides insights into molecular identity

    PubMed Central

    Richardson, Andrew P.; Halestrap, Andrew P.

    2016-01-01

    Inhibition of the mitochondrial permeability transition pore (MPTP) by the novel inhibitor GNX-4975 was characterized. Titration of MPTP activity in de-energized rat liver mitochondria allowed determination of the number of GNX-4975-binding sites and their dissociation constant (Ki). Binding sites increased in number when MPTP opening was activated by increasing [Ca2+], phenylarsine oxide (PAO) or KSCN, and decreased when MPTP opening was inhibited with bongkrekic acid (BKA) or ADP. Values ranged between 9 and 50 pmol/mg of mitochondrial protein, but the Ki remained unchanged at ∼1.8 nM when the inhibitor was added before Ca2+. However, when GNX-4975 was added after Ca2+ it was much less potent with a Ki of ∼140 nM. These data imply that a protein conformational change is required to form the MPTP complex and generate the GNX-4975-binding site. Occupation of the latter with GNX-4975 prevents the Ca2+ binding that triggers pore opening. We also demonstrated that GNX-4975 stabilizes an interaction between the adenine nucleotide translocase (ANT), held in its ‘c’ conformation with carboxyatractyloside (CAT), and the phosphate carrier (PiC) bound to immobilized PAO. No components of the F1Fo-ATP synthase bound significantly to immobilized PAO. Our data are consistent with our previous proposal that the MPTP may form at an interface between the PiC and ANT (or other similar mitochondrial carrier proteins) when they adopt novel conformations induced by factors that sensitize the MPTP to [Ca2+]. We propose that GNX-4975 binds to this interface preventing a calcium-triggered event that opens the interface into a pore. PMID:26920024

  15. Quantification of active mitochondrial permeability transition pores using GNX-4975 inhibitor titrations provides insights into molecular identity.

    PubMed

    Richardson, Andrew P; Halestrap, Andrew P

    2016-05-01

    Inhibition of the mitochondrial permeability transition pore (MPTP) by the novel inhibitor GNX-4975 was characterized. Titration of MPTP activity in de-energized rat liver mitochondria allowed determination of the number of GNX-4975-binding sites and their dissociation constant (Ki). Binding sites increased in number when MPTP opening was activated by increasing [Ca(2+)], phenylarsine oxide (PAO) or KSCN, and decreased when MPTP opening was inhibited with bongkrekic acid (BKA) or ADP. Values ranged between 9 and 50 pmol/mg of mitochondrial protein, but the Ki remained unchanged at ∼1.8 nM when the inhibitor was added before Ca(2+) However, when GNX-4975 was added after Ca(2+) it was much less potent with a Ki of ∼140 nM. These data imply that a protein conformational change is required to form the MPTP complex and generate the GNX-4975-binding site. Occupation of the latter with GNX-4975 prevents the Ca(2+) binding that triggers pore opening. We also demonstrated that GNX-4975 stabilizes an interaction between the adenine nucleotide translocase (ANT), held in its 'c' conformation with carboxyatractyloside (CAT), and the phosphate carrier (PiC) bound to immobilized PAO. No components of the F1Fo-ATP synthase bound significantly to immobilized PAO. Our data are consistent with our previous proposal that the MPTP may form at an interface between the PiC and ANT (or other similar mitochondrial carrier proteins) when they adopt novel conformations induced by factors that sensitize the MPTP to [Ca(2+)]. We propose that GNX-4975 binds to this interface preventing a calcium-triggered event that opens the interface into a pore.

  16. The genesis of the Dunite Transition Zone in the Oman Ophiolite: new insights from Major and Rare Earth Elements.

    NASA Astrophysics Data System (ADS)

    Benoit, M.; Theveny, M.; Claverie, M.; Rospabé, M.; Abily, B.; Ceuleneer, G.

    2014-12-01

    In most ophiolites, the contact between the mantle peridotites and the gabbroic cumulates from the lower oceanic crust is underlined by a horizon of dunite ranging in thickness from a few meters to a few hundred meters. The genesis of this dunitic transition zone (DTZ) can be attributed to different processes that are not necessarily mutually exclusive. They include olivine accumulation from high-Mg melts, reaction melting between a mantle peridotite and a melt under-saturated with pyroxene, destabilization of pyroxenes by high temperature fluid-rock reaction in conditions of water saturation. To precise and quantify the nature of these reactions and to determine their relative contribution has a major impact on our understanding of basalt genesis and of the chemical budgets at oceanic spreading centers. To reach this objective, we densely sampled the DTZ across several sections in the different massifs of the Oman ophiolites. The chemical composition of the dunites (WR major element and REE concentrations, microprobe data) presents a dramatic but not random variability both along single cross sections and from one cross section to the others. As an example, REE concentrations are a useful tool to investigate the petrogenetic processes behind this organization: in this study we have developed a chemical protocol in order to determine precisely (below 1% RSD) their concentrations, even for very low values (down to 0.1 ng.g-1). REE concentrations in true dunites are intensely variables: 0.5<[La]<100 ng.g-1; 0.1<[Eu]<4 ng.g-1; 8<[Yb]<50 ng.g-1. These variations are not random, LREE (La/Sm) ratios inversely correlate with HREE (Gd/Yb) ratios, which is a characteristic of melt/rock interaction. The various chemical tracers (major, minor and trace elements) indicate that the deep levels of the DTZ record a complex interaction history between mantle peridotites and various kinds of melts + fluids that migrated, stagnated and crystallized at different levels of this

  17. Latest Pannonian and Quaternary evolution at the transition between Eastern Alps and Pannonian Basin: new insights from geophysical, sedimentological and geochronological data

    NASA Astrophysics Data System (ADS)

    Zámolyi, A.; Salcher, B.; Draganits, E.; Exner, U.; Wagreich, M.; Gier, S.; Fiebig, M.; Lomax, J.; Surányi, G.; Diel, M.; Zámolyi, F.

    2016-08-01

    The transition zone between Eastern Alps and Pannonian Basin is a key area for the investigation of the interplay between regional uplift, local tectonic subsidence and depositional environment. Our study area, the western margin of the Little Hungarian Plain, is characterized by gentle hills, plateaus and depressions, of which several are filled by lakes—including one of Austria's largest and shallowest lakes, Lake Neusiedl. Geological investigation is hampered by the scarcity of outcrops, and thus direct observation of sedimentological or structural features is difficult. Despite a long research history in the area, a consistent landscape evolution model considering all relevant constraints is lacking so far. In this study, we apply multidisciplinary methods to decipher the complex tectonic and fluvial depositional evolution of the region. Local data from shallow-lake drilling and seismic investigation are combined with regional data from industrial seismics and core data to gain new insights into the latest Pannonian (Late Miocene) and Quaternary evolution. Shallow-lake seismic data show the erosionally truncated Pannonian sediments dipping and thickening toward southeast, toward the modern depocenter of the Little Hungarian Plain. Overlying Quaternary fluvial sediments show a very similar thickening trend except for the area on the plateau north of the lake indicating ongoing subsidence in major parts of the basin. Drill cores from locations along the lake seismic lines were analyzed concerning their age, mineralogy and heavy minerals and compared with outcrop samples from the surrounding plains and the plateau to derive indications on sediment provenance. A key observation is the apparent lack of a significant gravel layer on top of the tilted Pannonian sediments beneath Lake Neusiedl. Small-scale faults can be observed in the lake seismic sections along with key sedimentary features. Significant differences of the current elevation of the top Pannonian

  18. Novel Insights Into The Mode of Inhibition of Class A SHV-1 Beta-Lactamases Revealed by Boronic Acid Transition State Inhibitors

    SciTech Connect

    W Ke; J Sampson; C Ori; F Prati; S Drawz; C Bethel; R Bonomo; F van den Akker

    2011-12-31

    Boronic acid transition state inhibitors (BATSIs) are potent class A and C {beta}-lactamase inactivators and are of particular interest due to their reversible nature mimicking the transition state. Here, we present structural and kinetic data describing the inhibition of the SHV-1 {beta}-lactamase, a clinically important enzyme found in Klebsiella pneumoniae, by BATSI compounds possessing the R1 side chains of ceftazidime and cefoperazone and designed variants of the latter, compounds 1 and 2. The ceftazidime and cefoperazone BATSI compounds inhibit the SHV-1 {beta}-lactamase with micromolar affinity that is considerably weaker than their inhibition of other {beta}-lactamases. The solved crystal structures of these two BATSIs in complex with SHV-1 reveal a possible reason for SHV-1's relative resistance to inhibition, as the BATSIs adopt a deacylation transition state conformation compared to the usual acylation transition state conformation when complexed to other {beta}-lactamases. Active-site comparison suggests that these conformational differences might be attributed to a subtle shift of residue A237 in SHV-1. The ceftazidime BATSI structure revealed that the carboxyl-dimethyl moiety is positioned in SHV-1's carboxyl binding pocket. In contrast, the cefoperazone BATSI has its R1 group pointing away from the active site such that its phenol moiety moves residue Y105 from the active site via end-on stacking interactions. To work toward improving the affinity of the cefoperazone BATSI, we synthesized two variants in which either one or two extra carbons were added to the phenol linker. Both variants yielded improved affinity against SHV-1, possibly as a consequence of releasing the strain of its interaction with the unusual Y105 conformation.

  19. Analysis of the nicotinamide phosphoribosyltransferase family provides insight into vertebrate adaptation to different oxygen levels during the water-to-land transition.

    PubMed

    Fang, Chengchi; Guan, Lihong; Zhong, Zaixuan; Gan, Xiaoni; He, Shunping

    2015-08-01

    One of the most important events in vertebrate evolutionary history is the water-to-land transition, during which some morphological and physiological changes occurred in concert with the loss of specific genes in tetrapods. However, the molecular mechanisms underlying this transition have not been well explored. To explore vertebrate adaptation to different oxygen levels during the water-to-land transition, we performed comprehensive bioinformatics and experimental analysis aiming to investigate the NAMPT family in vertebrates. NAMPT, a rate-limiting enzyme in the salvage pathway of NAD+ biosynthesis, is critical for cell survival in a hypoxic environment, and a high level of NAMPT significantly augments oxidative stress in normoxic environments. Phylogenetic analysis showed that NAMPT duplicates arose from a second round whole-genome duplication event. NAMPTA existed in all classes of vertebrates, whereas NAMPTB was only found in fishes and not tetrapods. Asymmetric evolutionary rates and purifying selection were the main evolutionary forces involved. Although functional analysis identified several functionally divergent sites during NAMPT family evolution, in vitro experimental data demonstrated that NAMPTA and NAMPTB were functionally conserved for NAMPT enzymatic function in the NAD+ salvage pathway. In situ hybridization revealed broad NAMPTA and NAMPTB expression patterns, implying regulatory functions over a wide range of developmental processes. The morpholino-mediated knockdown data demonstrated that NAMPTA was more essential than NAMPTB for vertebrate embryo development. We propose that the retention of NAMPTB in water-breathing fishes and its loss in air-breathing tetrapods resulted from vertebrate adaptation to different oxygen levels during the water-to-land transition.

  20. The Continent-Ocean Transition in the Mid-Norwegian Margin: Insight From Seismic Data and the Onshore Caledonian Analogue in the Seve Nappe Complex

    NASA Astrophysics Data System (ADS)

    Abdelmalak, Mansour M.; Planke, Sverre; Andersen, Torgeir B.; Faleide, Jan Inge; Corfu, Fernando; Tegner, Christian; Myklebust, Reidun

    2015-04-01

    The continental breakup and initial seafloor spreading in the NE Atlantic was accompanied by widespread intrusive and extrusive magmatism and the formation of conjugate volcanic passive margins. These margins are characterized by the presence of seaward dipping reflectors (SDR), an intense network of mafic sheet intrusions of the continental crust and adjacent sedimentary basins and a high-velocity lower crustal body. Nevertheless many issues remain unclear regarding the structure of volcanic passive margins; in particular the transitional crust located beneath the SDR.New and reprocessed seismic reflection data on the Mid-Norwegian margin allow a better sub-basalt imaging of the transitional crust located beneath the SDR. Different high-amplitude reflections with abrupt termination and saucer shaped geometries are identified and interpreted as sill intrusions. Other near vertical and inclined reflections are interpreted as dykes or dyke swarms. We have mapped the extent of the dyke reflections along the volcanic margin. The mapping suggests that the dykes represent the main feeder system for the SDR. The identification of saucer shaped sills implies the presence of sediments in the transitional zone beneath the volcanic sequences. Onshore exposures of Precambrian basement of the eroded volcanic margin in East Greenland show that, locally, the transitional crust is highly intruded by dykes and intrusive complexes with an increasing intensity of the plumbing and dilatation of the continental crust ocean-ward. Another well exposed analogue for a continent-ocean transitional crust is located within the Seve Nappe Complex (SNC) of the Scandinavian Caledonides. The best-preserved parts of SNC in the Pårte, Sarek, Kebnekaise, Abisko, and Indre Troms mountains are composed mainly of meta-sandstones and shales (now hornfelses) truncated typically by mafic dykes. At Sarek and Pårte, the dykes intrude the sedimentary rocks of the Favoritkammen Group, with a dyke density up

  1. New insights into the regulation by RUNX1 and GFI1(s) proteins of the endothelial to hematopoietic transition generating primordial hematopoietic cells

    PubMed Central

    Thambyrajah, Roshana; Patel, Rahima; Mazan, Milena; Lie-a-Ling, Michael; Lilly, Andrew; Eliades, Alexia; Menegatti, Sara; Garcia-Alegria, Eva; Florkowska, Magdalena; Batta, Kiran; Kouskoff, Valerie; Lacaud, Georges

    2016-01-01

    ABSTRACT The first hematopoietic cells are generated very early in ontogeny to support the growth of the embryo and to provide the foundation to the adult hematopoietic system. There is a considerable therapeutic interest in understanding how these first blood cells are generated in order to try to reproduce this process in vitro. This would allow generating blood products, or hematopoietic cell populations from embryonic stem (ES) cells, induced pluripotent stem cells or through directed reprogramming. Recent studies have clearly established that the first hematopoietic cells originate from a hemogenic endothelium (HE) through an endothelial to hematopoietic transition (EHT). The molecular mechanisms underlining this transition remain largely unknown with the exception that the transcription factor RUNX1 is critical for this process. In this Extra Views report, we discuss our recent studies demonstrating that the transcriptional repressors GFI1 and GFI1B have a critical role in the EHT. We established that these RUNX1 transcriptional targets are actively implicated in the downregulation of the endothelial program and the loss of endothelial identity during the formation of the first blood cells. In addition, our results suggest that GFI1 expression provides an ideal novel marker to identify, isolate and study the HE cell population. PMID:27399214

  2. Phylogenetic analyses of gazelles reveal repeated transitions of key ecological traits and provide novel insights into the origin of the genus Gazella.

    PubMed

    Lerp, Hannes; Klaus, Sebastian; Allgöwer, Stefanie; Wronski, Torsten; Pfenninger, Markus; Plath, Martin

    2016-05-01

    African bovids are a famous example of a taxonomic group in which the correlated evolution of body size, feeding mode, gregariousness, and social organization in relation to the preferred habitat type has been investigated. A continuum has been described ranging from small-bodied, sedentary, solitary or socially monogamous, forest- or bush-dwelling, browsing species that seek shelter from predation in dense vegetation, to large-bodied, migratory, highly gregarious, grazing taxa inhabiting open savannahs and relying on flight or group-defense behaviors when facing predators. Here, we examined a geographically widespread clade within the Bovidae (the genus Gazella) that shows minimal interspecific variation in body size and asked if we could still uncover correlated changes of key ecological and behavioral traits during repeated transitions from open-land to mountain-dwelling. Our study used a multi-locus phylogeny (based on sequence variation of Cytb and six nuclear intron markers) of all extant members of the genus Gazella to infer evolutionary patterns of key ecological and behavioral traits and to estimate ancestral character states using Bayesian inference. At the base of the Gazella-phylogeny, open plains were inferred as the most likely habitat type, and three independent transitions toward mountain-dwelling were uncovered. Those shifts coincided with shifts from migratory to sedentary lifestyles. Character estimation for group size was largely congruent with movement patterns in that species forming large groups tended to be migratory, while small group size was correlated with a sedentary lifestyle. Evolutionary patterns of two other conspicuous traits (twinning ability vs. exclusive singleton births and hornless vs. horned females) did not follow this trend in the Gazella-phylogeny. Furthermore, we inferred the genus Gazella to have emerged in the Late Miocene to Pliocene (10-3Mya), and estimating ancestral ranges based on a Dispersal

  3. Phylogenetic analyses of gazelles reveal repeated transitions of key ecological traits and provide novel insights into the origin of the genus Gazella.

    PubMed

    Lerp, Hannes; Klaus, Sebastian; Allgöwer, Stefanie; Wronski, Torsten; Pfenninger, Markus; Plath, Martin

    2016-05-01

    African bovids are a famous example of a taxonomic group in which the correlated evolution of body size, feeding mode, gregariousness, and social organization in relation to the preferred habitat type has been investigated. A continuum has been described ranging from small-bodied, sedentary, solitary or socially monogamous, forest- or bush-dwelling, browsing species that seek shelter from predation in dense vegetation, to large-bodied, migratory, highly gregarious, grazing taxa inhabiting open savannahs and relying on flight or group-defense behaviors when facing predators. Here, we examined a geographically widespread clade within the Bovidae (the genus Gazella) that shows minimal interspecific variation in body size and asked if we could still uncover correlated changes of key ecological and behavioral traits during repeated transitions from open-land to mountain-dwelling. Our study used a multi-locus phylogeny (based on sequence variation of Cytb and six nuclear intron markers) of all extant members of the genus Gazella to infer evolutionary patterns of key ecological and behavioral traits and to estimate ancestral character states using Bayesian inference. At the base of the Gazella-phylogeny, open plains were inferred as the most likely habitat type, and three independent transitions toward mountain-dwelling were uncovered. Those shifts coincided with shifts from migratory to sedentary lifestyles. Character estimation for group size was largely congruent with movement patterns in that species forming large groups tended to be migratory, while small group size was correlated with a sedentary lifestyle. Evolutionary patterns of two other conspicuous traits (twinning ability vs. exclusive singleton births and hornless vs. horned females) did not follow this trend in the Gazella-phylogeny. Furthermore, we inferred the genus Gazella to have emerged in the Late Miocene to Pliocene (10-3Mya), and estimating ancestral ranges based on a Dispersal

  4. The coupled δ 13C-radiocarbon systematics of three Late Glacial/early Holocene speleothems; insights into soil and cave processes at climatic transitions

    NASA Astrophysics Data System (ADS)

    Rudzka, D.; McDermott, F.; Baldini, L. M.; Fleitmann, D.; Moreno, A.; Stoll, H.

    2011-08-01

    The coupled δ 13C-radiocarbon systematics of three European stalagmites deposited during the Late Glacial and early Holocene were investigated to understand better how the carbon isotope systematics of speleothems respond to climate transitions. The emphasis is on understanding how speleothems may record climate-driven changes in the proportions of biogenic (soil carbon) and limestone bedrock derived carbon. At two of the three sites, the combined δ 13C and 14C data argue against greater inputs of limestone carbon as the sole cause of the observed shift to higher δ 13C during the cold Younger Dryas. In these stalagmites (GAR-01 from La Garma cave, N. Spain and So-1 from Sofular cave, Turkey), the combined changes in δ 13C and initial 14C activities suggest enhanced decomposition of old stored, more recalcitrant, soil carbon at the onset of the warmer early Holocene. Alternative explanations involving gradual temporal changes between open- and closed-system behaviour during the Late Glacial are difficult to reconcile with observed changes in speleothem δ 13C and the growth rates. In contrast, a stalagmite from Pindal cave (N. Spain) indicates an abrupt change in carbon inputs linked to local hydrological and disequilibrium isotope fractionation effects, rather than climate change. For the first time, it is shown that while the initial 14C activities of all three stalagmites broadly follow the contemporaneous atmospheric 14C trends (the Younger Dryas atmospheric 14C anomaly can be clearly discerned), subtle changes in speleothem initial 14C activities are linked to climate-driven changes in soil carbon turnover at a climate transition.

  5. Continental hyperextension, mantle exhumation and thin oceanic crust at the continent-ocean transition, West Iberia: new insights from wide-angle seismic

    NASA Astrophysics Data System (ADS)

    Davy, Richard; Minshull, Tim; Bayrakci, Gaye; Bull, Jon; Klaeschen, Dirk; Papenberg, Cord; Reston, Timothy; Sawyer, Dale; Zelt, Colin

    2016-04-01

    Anomalously thin oceanic crust and expanses of exhumed and serpentinised mantle material at magma-poor rift margins are now a globally observed phenomena that characterizes the seaward limit of the continent-ocean transition. Hyperextension of continental crust at the Deep Galicia rifted margin in the North Atlantic has been accommodated by the rotation of continental fault blocks, which are underlain by the S-reflector, an interpreted detachment fault, along which exhumed and serpentinized mantle peridotite is observed. West of these features, the enigmatic Peridotite Ridge has been suggested to delimit the seaward extent of the continent-ocean transition. An outstanding question at this margin is where oceanic crust begins, with little existing data to constrain this boundary and a lack of clear seafloor spreading magnetic anomalies. Here we present results from a 160-km-long wide-angle seismic profile (WE-1). Forward modelling and travel time tomography models of the crustal compressional velocity structure reveal highly thinned and rotated crustal blocks overlying the S-reflector, which correlates with the 6.0 - 7.0 kms-1 velocity contours, corresponding to peridotite serpentinization of 60 - 30 %, respectively. West of the Peridotite Ridge we observe a basement layer which is 2.8 - 3.5 km thick in which velocities increase smoothly and rapidly from ˜4.6 kms-1 to 7.3 - 7.6 kms-1,with an average velocity gradient of 1.00 s-1. Below this, velocities slowly increase toward typical mantle velocities. Such a downward increase into mantle velocities is interpreted as decreasing serpentinization of mantle material with depth. However, sparse Moho reflections indicate the onset of an anomalously thin oceanic crust, which increases in thickness from ˜0.5 km to ˜1.5 km over a distance of 35 km, seaward.

  6. New insights into the thermal behaviour of organic ionic plastic crystals: magnetic resonance imaging of polycrystalline morphology alterations induced by solid-solid phase transitions.

    PubMed

    Romanenko, Konstantin; Pringle, Jennifer M; O'Dell, Luke A; Forsyth, Maria

    2015-07-15

    Organic ionic plastic crystals (OIPCs) show strong potential as solid-state electrolytes for lithium battery applications, demonstrating promising electrochemical performance and eliminating the need for a volatile and flammable liquid electrolyte. The ionic conductivity (σ) in these systems has recently been shown to depend strongly on polycrystalline morphology, which is largely determined by the sample's thermal history. [K. Romanenko et al., J. Am. Chem. Soc., 2014, 136, 15638]. Tailoring this morphology could lead to conductivities sufficiently high for battery applications, so a more complete understanding of how phenomena such as solid-solid phase transitions can affect the sample morphology is of significant interest. Anisotropic relaxation of nuclear spin magnetisation provides a new MRI based approach for studies of polycrystalline materials at both a macroscopic and molecular level. In this contribution, morphology alterations induced by solid-solid phase transitions in triisobutyl(methyl)phosphonium bis(fluorosulfonyl)imide (P1444FSI) and diethyl(methyl)(isobutyl)phosphonium hexafluorophosphate (P1224PF6) are examined using magnetic resonance imaging (MRI), alongside nuclear magnetic resonance (NMR) spectroscopy, diffusion measurements and conductivity data. These observations are linked to molecular dynamics and structural behaviour crucial for the conductive properties of OIPCs. A distinct correlation is established between the conductivity at a given temperature, σ(T), and the intensity of the narrow NMR signal that is attributed to a mobile fraction, fm(T), of ions in the OIPC. To explain these findings we propose an analogy with the well-studied relationship between permeability (k) and void fraction (θ) in porous media, with k(θ) commonly quantified by a power-law dependence that can also be employed to describe σ(fm).

  7. Mantle transition zone structure beneath the Changbai volcano: Insight into deep slab dehydration and hot upwelling near the 410 km discontinuity

    NASA Astrophysics Data System (ADS)

    Tian, You; Zhu, Hongxiang; Zhao, Dapeng; Liu, Cai; Feng, Xuan; Liu, Ting; Ma, Jincheng

    2016-08-01

    We study the detailed mantle transition zone structure beneath the active Changbai intraplate volcano in Northeast China by using a receiver-function method. A total of 3005 teleseismic receiver functions recorded by 70 broadband stations are obtained by using a common-conversion-point stacking method. For conducting the time-to-depth conversion, we use a three-dimensional velocity model of the study region so as to take into account the influence of structural heterogeneities. Our results reveal significant depth variations of the 410, 520, and 660 km discontinuities. A broad depression of the 410 km discontinuity and a low-velocity anomaly are revealed beneath the Changbai volcano, which may reflect a large-scale hot mantle upwelling around the 410 km discontinuity with a positive Clapeyron slope. The 520 km discontinuity is identified clearly, and its uplift occurs above the stagnant Pacific slab. We also find a prominent depression of the 660 km discontinuity, which is elongated along the trend of deep earthquake clusters in a range of 39°N-44°N latitude, and the depression area has a lateral extent of about 400 km. Because the 520 and 660 km discontinuities correspond to positive and negative Clapeyron slopes, respectively, we think that the 520 uplift and the 660 depression are caused by the cold subducting Pacific slab. A part of the Pacific slab may have penetrated into the lower mantle and so caused the large-scale 660 depression in front of the deep earthquake clusters. Our results also reveal a part of the upper boundary of the subducting Pacific slab in the mantle transition zone.

  8. Insights into the smooth-to-rough transitioning in Mycobacterium bolletii unravels a functional Tyr residue conserved in all mycobacterial MmpL family members.

    PubMed

    Bernut, Audrey; Viljoen, Albertus; Dupont, Christian; Sapriel, Guillaume; Blaise, Mickaël; Bouchier, Christiane; Brosch, Roland; de Chastellier, Chantal; Herrmann, Jean-Louis; Kremer, Laurent

    2016-03-01

    In mycobacteria, MmpL proteins represent key components that participate in the biosynthesis of the complex cell envelope. Whole genome analysis of a spontaneous rough morphotype variant of Mycobacterium abscessus subsp. bolletii identified a conserved tyrosine that is crucial for the function of MmpL family proteins. Isogenic smooth (S) and rough (R) variants differed by a single mutation linked to a Y842H substitution in MmpL4a. This mutation caused a deficiency in glycopeptidolipid production/transport in the R variant and a gain in the capacity to produce cords in vitro. In zebrafish, increased virulence of the M. bolletii R variant over the parental S strain was found, involving massive production of serpentine cords, abscess formation and rapid larval death. Importantly, this finding allowed us to demonstrate an essential role of Tyr842 in several different MmpL proteins, including Mycobacterium tuberculosis MmpL3. Structural homology models of MmpL4a and MmpL3 identified two additional critical residues located in the transmembrane regions TM10 and TM4 that are facing each other. We propose that these central residues are part of the proton-motive force that supplies the energy for substrate transport. Hence, we provide important insights into mechanistic/structural aspects of MmpL proteins as lipid transporters and virulence determinants in mycobacteria. PMID:26585558

  9. Major softening at brittle-ductile transition due to interplay between chemical and deformation processes: An insight from evolution of shear bands in the South Armorican Shear Zone

    NASA Astrophysics Data System (ADS)

    Bukovská, Zita; Jeřábek, Petr; Morales, Luiz F. G.

    2016-02-01

    The formation of S-C/C' fabrics in the South Armorican Shear Zone has been evaluated by detailed microstructural study where the focus was given to initiation and early evolution of the C/C' fabric shear bands. Our observations suggest that the S-C/C' fabrics formed at distinct temperature conditions indicating >550°C for the S fabric and 300-350°C at 100-400 MPa for the C/C' fabric shear bands. The evolving microstructure within shear bands documents switches in deformation mechanisms related to positive feedbacks between deformation and chemical processes and imposes mechanical constraints on the evolution of the brittle-ductile transition in the continental transform fault domains. Three stages of shear band evolution have been identified. Stage I corresponds to initiation of shear bands via formation of microcracks with possible yielding differential stress of up to 250 MPa. Stage II is associated with subgrain rotation recrystallization and dislocation creep of quartz and coeval dissolution-precipitation creep of microcline. Recrystallized quartz grains show continual increase in size and decrease in stress and strain rates from 94 MPa to 17-26 MPa and 1.8 × 10-1 s-1-9 × 10-17 s-1 associated with deformation partitioning into weaker microcline layer and shear band widening. The quartz mechanical data allowed us to set some constrains for coeval dissolution-precipitation of microcline which at our estimated pressure-temperature conditions suggests creep at 17-26 MPa differential stress and 1.8 × 10-15 s-1 strain rate. Stage III is characterized by localized slip along white mica bands accommodated by dislocation creep at strain rate 1.8 × 10-14 s-1 and stress 5.75 MPa. Our mechanical data point to dynamic evolution of the studied brittle-ductile transition characterized by major weakening to strengths >10 MPa. Such nonsteady state evolution may be common in crustal shear zones especially when phase transformations are involved.

  10. Insights into the geometric and electronic structure of transition metal centers from valence-to-core X-ray emission spectroscopy.

    PubMed

    Pollock, Christopher J; DeBeer, Serena

    2015-11-17

    A long-standing goal of inorganic chemists is the ability to decipher the geometric and electronic structures of chemical species. This is particularly true for the study of small molecule and biological catalysts, where this knowledge is critical for understanding how these molecules effect chemical transformations. Numerous techniques are available for this task, and collectively they have enabled detailed understanding of many complex chemical systems. Despite this battery of probes, however, challenges still remain, particularly when the structural question involves subtle perturbations of the ligands bound to a metal center, as is often the case during chemical reactions. It is here that, as an emerging probe of chemical structure, valence-to-core (VtC) X-ray emission spectroscopy (XES) holds promise. VtC XES begins with ionization of a 1s electron from a metal ion by high energy X-ray photons. Electrons residing in ligand-localized valence orbitals decay to fill the 1s hole, emitting fluorescent photons in the process; in this manner, VtC XES primarily probes the filled, ligand-based orbitals of a metal complex. This is in contrast to other X-ray based techniques, such as K-edge X-ray absorption and EXAFS, which probe the unoccupied d-manifold orbitals and atomic scatterers surrounding the metal, respectively. As a hard X-ray technique, VtC XES experiments can be performed on a variety of sample states and environments, enabling application to demanding systems, such as high pressure cells and dilute biological samples. VtC XES thus can offer unique insights into the geometric and electronic structures of inorganic complexes. In recent years, we have sought to use VtC XES in the study of inorganic and bioinorganic complexes; doing so, however, first required a thorough and detailed understanding of the information content of these spectra. Extensive experimental surveys of model compounds coupled to the insights provided by DFT calculated spectra of real and

  11. Distribution of transition times in a stochastic model of excitable cell: Insights into the cell-intrinsic mechanisms of randomness in neuronal interspike intervals

    NASA Astrophysics Data System (ADS)

    Requena-Carrión, Jesús; Requena-Carrión, Víctor J.

    2016-04-01

    In this paper, we develop an analytical approach to studying random patterns of activity in excitable cells. Our analytical approach uses a two-state stochastic model of excitable system based on the electrophysiological properties of refractoriness and restitution, which characterize cell recovery after excitation. By applying the notion of probability density flux, we derive the distributions of transition times between states and the distribution of interspike interval (ISI) durations for a constant applied stimulus. The derived ISI distribution is unimodal and, provided that the time spent in the excited state is constant, can be approximated by a Rayleigh peak followed by an exponential tail. We then explore the role of the model parameters in determining the shape of the derived distributions and the ISI coefficient of variation. Finally, we use our analytical results to study simulation results from the stochastic Morris-Lecar neuron and from a three-state extension of the proposed stochastic model, which is capable of reproducing multimodal ISI histograms.

  12. Feeding behaviour in a 'basal' tortoise provides insights on the transitional feeding mode at the dawn of modern land turtle evolution.

    PubMed

    Natchev, Nikolay; Tzankov, Nikolay; Werneburg, Ingmar; Heiss, Egon

    2015-01-01

    Almost all extant testudinids are highly associated with terrestrial habitats and the few tortoises with high affinity to aquatic environments are found within the genus Manouria. Manouria belongs to a clade which forms a sister taxon to all remaining tortoises and is suitable as a model for studying evolutionary transitions within modern turtles. We analysed the feeding behaviour of Manouria emys and due to its phylogenetic position, we hypothesise that the species might have retained some ancestral features associated with an aquatic lifestyle. We tested whether M. emys is able to feed both in aquatic and terrestrial environments. In fact, M. emys repetitively tried to reach submerged food items in water, but always failed to grasp them-no suction feeding mechanism was applied. When feeding on land, M. emys showed another peculiar behaviour; it grasped food items by its jaws-a behaviour typical for aquatic or semiaquatic turtles-and not by the tongue as generally accepted as the typical feeding mode in all tortoises studied so far. In M. emys, the hyolingual complex remained retracted during all food uptake sequences, but the food transport was entirely lingual based. The kinematical profiles significantly differed from those described for other tortoises and from those proposed from the general models on the function of the feeding systems in lower tetrapods. We conclude that the feeding behaviour of M. emys might reflect a remnant of the primordial condition expected in the aquatic ancestor of the tortoises. PMID:26339550

  13. Insights on the opening of the Galerian mammal migration pathway from magnetostratigraphy of the Pleistocene marine-continental transition in the Arda River section (northern Italy)

    NASA Astrophysics Data System (ADS)

    Monesi, Edoardo; Muttoni, Giovanni; Scardia, Giancarlo; Felletti, Fabrizio; Bona, Fabio; Sala, Benedetto; Tremolada, Fabrizio; Francou, Carlo; Raineri, Gianluca

    2016-09-01

    We investigated the magnetostratigraphy of the Arda River section (northern Italy) where the transition from marine to continental sedimentation occurring in the Po River basin during the Pleistocene is registered. Four magnetic polarity reversals were used to construct an age model of sedimentation aided by marine biostratigraphy and tied to a standard δ18O curve from the literature. The section spans from the Olduvai subchron (1.94-1.78 Ma) across the Jaramillo subchron (1.07-0.99 Ma) up to the Brunhes-Matuyama boundary (0.78 Ma). The onset of continental deposition occurred during marine isotope stage (MIS) 30 at ˜1.04 Ma. An association of Villafranchian and Early Galerian mammals, including Sus strozzii and Ursus dolinensis, has been found in the continental sediments dated to MIS 29-27 (˜0.99 Ma). Above follows a prominent fluvial conglomerate attributed to the first major lowstand of the Pleistocene culminating with MIS 22 at ˜0.9 Ma during the late Early Pleistocene climate turnover (EPT). These and other data from the literature are used to reconstruct the onset of continental deposition in the greater Po basin and shed light on the opening of the migration pathway that brought far-traveled Galerian mammal immigrants to enter Europe for the first time during the EPT.

  14. Insights on the isotropic-to-smectic A transition in ionic liquid crystals from coarse-grained molecular dynamics simulations: the role of microphase segregation.

    PubMed

    Saielli, Giacomo; Bagno, Alessandro; Wang, Yanting

    2015-03-01

    We have investigated the role of microphase segregation as the driving force in the stabilization of thermotropic ionic liquid crystals of smectic type. To this end we have applied the heterogeneity order parameter, initially proposed for ionic liquids, to the coarse-grained molecular dynamics simulation results for a model system of an imidazolium nitrate ionic liquid crystal, [C16mim][NO3], whose phase diagram was recently studied. We have found that the heterogeneity order parameters become larger when the system goes through the transition from the isotropic phase to the smectic A phase as the temperature decreases. This can be understood by considering that, in the smectic A phase, the layered structure allows the tail groups to have a degree of aggregation larger than that in the isotropic phase. Our results highlight the role of microsegregation in the stabilization of ionic liquid crystals, which cannot be revealed by the commonly used translational and orientational order parameters used to describe liquid crystal phases.

  15. Feeding behaviour in a ‘basal’ tortoise provides insights on the transitional feeding mode at the dawn of modern land turtle evolution

    PubMed Central

    Tzankov, Nikolay; Werneburg, Ingmar; Heiss, Egon

    2015-01-01

    Almost all extant testudinids are highly associated with terrestrial habitats and the few tortoises with high affinity to aquatic environments are found within the genus Manouria. Manouria belongs to a clade which forms a sister taxon to all remaining tortoises and is suitable as a model for studying evolutionary transitions within modern turtles. We analysed the feeding behaviour of Manouria emys and due to its phylogenetic position, we hypothesise that the species might have retained some ancestral features associated with an aquatic lifestyle. We tested whether M. emys is able to feed both in aquatic and terrestrial environments. In fact, M. emys repetitively tried to reach submerged food items in water, but always failed to grasp them—no suction feeding mechanism was applied. When feeding on land, M. emys showed another peculiar behaviour; it grasped food items by its jaws—a behaviour typical for aquatic or semiaquatic turtles—and not by the tongue as generally accepted as the typical feeding mode in all tortoises studied so far. In M. emys, the hyolingual complex remained retracted during all food uptake sequences, but the food transport was entirely lingual based. The kinematical profiles significantly differed from those described for other tortoises and from those proposed from the general models on the function of the feeding systems in lower tetrapods. We conclude that the feeding behaviour of M. emys might reflect a remnant of the primordial condition expected in the aquatic ancestor of the tortoises. PMID:26339550

  16. Science insights.

    PubMed

    Tanabe, Kazuyuki

    2015-06-01

    "Below is an essay by Prof. Tanabe originally written in Japanese. It gives an insight to Prof. Tanabe's inquiring mind and his approach to science. He also seek, as always, to inspire and nudge the young to scientific discovery".

  17. Structure and Mechanism of Dimer-Monomer Transition of a Plant Poly(A)-Binding Protein upon RNA Interaction: Insights into Its Poly(A) Tail Assembly.

    PubMed

    Domingues, Mariane Noronha; Sforça, Mauricio Luis; Soprano, Adriana Santos; Lee, Jack; Souza, Tatiana de Arruda Campos Brasil de; Cassago, Alexandre; Portugal, Rodrigo Villares; Zeri, Ana Carolina de Mattos; Murakami, Mario Tyago; Sadanandom, Ari; Oliveira, Paulo Sergio Lopes de; Benedetti, Celso Eduardo

    2015-07-31

    Poly(A)-binding proteins (PABPs) play crucial roles in mRNA biogenesis, stability, transport and translational control in most eukaryotic cells. Although animal PABPs are well-studied proteins, the biological role, three-dimensional structure and RNA-binding mode of plant PABPs remain largely uncharacterized. Here, we report the structural features and RNA-binding mode of a Citrus sinensis PABP (CsPABPN1). CsPABPN1 has a domain architecture of nuclear PABPs (PABPNs) with a single RNA recognition motif (RRM) flanked by an acidic N-terminus and a GRPF-rich C-terminus. The RRM domain of CsPABPN1 displays virtually the same three-dimensional structure and poly(A)-binding mode of animal PABPNs. However, while the CsPABPN1 RRM domain specifically binds poly(A), the full-length protein also binds poly(U). CsPABPN1 localizes to the nucleus of plant cells and undergoes a dimer-monomer transition upon poly(A) interaction. We show that poly(A) binding by CsPABPN1 begins with the recognition of the RNA-binding sites RNP1 and RNP2, followed by interactions with residues of the β2 strands, which stabilize the dimer, thus leading to dimer dissociation. Like human PABPN1, CsPABPN1 also seems to form filaments in the presence of poly(A). Based on these data, we propose a structural model in which contiguous CsPABPN1 RRM monomers wrap around the RNA molecule creating a superhelical structure that could not only shield the poly(A) tail but also serve as a scaffold for the assembly of additional mRNA processing factors.

  18. Structure and Mechanism of Dimer-Monomer Transition of a Plant Poly(A)-Binding Protein upon RNA Interaction: Insights into Its Poly(A) Tail Assembly.

    PubMed

    Domingues, Mariane Noronha; Sforça, Mauricio Luis; Soprano, Adriana Santos; Lee, Jack; Souza, Tatiana de Arruda Campos Brasil de; Cassago, Alexandre; Portugal, Rodrigo Villares; Zeri, Ana Carolina de Mattos; Murakami, Mario Tyago; Sadanandom, Ari; Oliveira, Paulo Sergio Lopes de; Benedetti, Celso Eduardo

    2015-07-31

    Poly(A)-binding proteins (PABPs) play crucial roles in mRNA biogenesis, stability, transport and translational control in most eukaryotic cells. Although animal PABPs are well-studied proteins, the biological role, three-dimensional structure and RNA-binding mode of plant PABPs remain largely uncharacterized. Here, we report the structural features and RNA-binding mode of a Citrus sinensis PABP (CsPABPN1). CsPABPN1 has a domain architecture of nuclear PABPs (PABPNs) with a single RNA recognition motif (RRM) flanked by an acidic N-terminus and a GRPF-rich C-terminus. The RRM domain of CsPABPN1 displays virtually the same three-dimensional structure and poly(A)-binding mode of animal PABPNs. However, while the CsPABPN1 RRM domain specifically binds poly(A), the full-length protein also binds poly(U). CsPABPN1 localizes to the nucleus of plant cells and undergoes a dimer-monomer transition upon poly(A) interaction. We show that poly(A) binding by CsPABPN1 begins with the recognition of the RNA-binding sites RNP1 and RNP2, followed by interactions with residues of the β2 strands, which stabilize the dimer, thus leading to dimer dissociation. Like human PABPN1, CsPABPN1 also seems to form filaments in the presence of poly(A). Based on these data, we propose a structural model in which contiguous CsPABPN1 RRM monomers wrap around the RNA molecule creating a superhelical structure that could not only shield the poly(A) tail but also serve as a scaffold for the assembly of additional mRNA processing factors. PMID:26013164

  19. Continental hyperextension, mantle exhumation, and thin oceanic crust at the continent-ocean transition, West Iberia: New insights from wide-angle seismic

    NASA Astrophysics Data System (ADS)

    Davy, R. G.; Minshull, T. A.; Bayrakci, G.; Bull, J. M.; Klaeschen, D.; Papenberg, C.; Reston, T. J.; Sawyer, D. S.; Zelt, C. A.

    2016-05-01

    Hyperextension of continental crust at the Deep Galicia rifted margin in the North Atlantic has been accommodated by the rotation of continental fault blocks, which are underlain by the S reflector, an interpreted detachment fault, along which exhumed and serpentinized mantle peridotite is observed. West of these features, the enigmatic Peridotite Ridge has been inferred to delimit the western extent of the continent-ocean transition. An outstanding question at this margin is where oceanic crust begins, with little existing data to constrain this boundary and a lack of clear seafloor spreading magnetic anomalies. Here we present results from a 160 km long wide-angle seismic profile (Western Extension 1). Travel time tomography models of the crustal compressional velocity structure reveal highly thinned and rotated crustal blocks separated from the underlying mantle by the S reflector. The S reflector correlates with the 6.0-7.0 km s-1 velocity contours, corresponding to peridotite serpentinization of 60-30%, respectively. West of the Peridotite Ridge, shallow and sparse Moho reflections indicate the earliest formation of an anomalously thin oceanic crustal layer, which increases in thickness from ~0.5 km at ~20 km west of the Peridotite Ridge to ~1.5 km, 35 km further west. P wave velocities increase smoothly and rapidly below top basement, to a depth of 2.8-3.5 km, with an average velocity gradient of 1.0 s-1. Below this, velocities slowly increase toward typical mantle velocities. Such a downward increase into mantle velocities is interpreted as decreasing serpentinization of mantle rock with depth.

  20. Coupled pyrite concentration and sulfur isotopic insight into the paleo sulfate-methane transition zone (SMTZ) in the northern South China Sea

    NASA Astrophysics Data System (ADS)

    Lin, Qi; Wang, Jiasheng; Taladay, Katie; Lu, Hongfeng; Hu, Gaowei; Sun, Fei; Lin, Rongxiao

    2016-01-01

    The sulfate-methane transition zone (SMTZ) is an important diagenetic redox boundary within marine sediments where the anaerobic oxidation of methane (AOM), coupled with bacterial sulfate reduction, can promote sulfur isotopic enrichments in several solid phase minerals including pyrite (FeS2). Authigenic pyrite can form in concentrated abundances within the SMTZ and as such, can be used as a proxy to identify paleo-SMTZs. This study uses enrichments in 34S and anomalously high abundances of authigenic pyrites in 287 samples from the northern South China Sea (SCS) to determine the paleo-SMTZ. The pyrite samples were collected from sediment cores acquired at three sites, each of which are known to be located in natural gas hydrate-bearing regions. We assess the relative abundances of authigenic pyrites, the types of pyrite morphologies recovered in the cored sediments, and the sulfur isotopic values of recovered pyrite samples using two methods: (1) handpicked sample analysis using a binocular microscope, and (2) the chromium reduction method. Our results show that pyrite concentrations and sulfur isotopic compositions exhibit synchronous fluctuations, particularly from 6.8 m below seafloor (mbsf) to 8.4 mbsf at all three study sites. There is a significant increase in the occurrence of rod-like pyrite morphology within this key interval. We define the position of the paleo-SMTZ by the presence of anomalously high accumulations of pyrites at greater than 5.0 wt.% using the handpicking method or greater than 0.5 wt.% via the chromium reduction method, along with positive Δδ34S excursions greater than 10.0‰ VCDT. We discovered a regional paleo-SMTZ that is shallower than the modern SMTZ, suggesting a previous period of elevated methane flux from depth, possibly related to widespread gas hydrate dissociation.

  1. Multiple boron-boron bonds in neutral molecules: an insight from the extended transition state method and the natural orbitals for chemical valence scheme.

    PubMed

    Mitoraj, Mariusz P; Michalak, Artur

    2011-03-21

    We have analyzed the character of B═B and B≡B bonds in the neutral molecules of general form: LHB═BHL (2-L) and LB≡BL (3-L), for various ancillary ligands L attached to the boron center, based on a recently developed method that combines the extended transition state scheme with the theory of natural orbitals for chemical valence (ETS-NOCV). In the case of molecules with the B═B bond, 2-L, we have included L = PMe(3), PF(3), PCl(3), PH(3), C(3)H(4)N(2)═C(NHCH)(2), whereas for molecules containing the B≡B connection, 3-L, the following ligands were considered L = CO, PMe(3), PCl(3), (Me(2)NCH(2)CH(2)O)(2)Ge. The results led us to conclude that use of phosphorus ligands leads to strengthening of the B═B bond by 6.4 kcal/mol (for 2-PMe(3)), by 4.4 (for 2-PF(3)) and by 9.2 (for 2-PH(3)), when compared to a molecule developed on the experimental basis, 2-C(3)H(4)N(2) (ΔE(total) = -118.3 kcal/mol). The ETS scheme has shown that all contributions, that is, (i) orbital interaction ΔE(orb), (ii) Pauli repulsion ΔE(Pauli), and (iii) electrostatic stabilization ΔE(elstat), are important in determining the trend in the B═B bond energies, ΔE(total). ETS-NOCV results revealed that both σ(B═B) and π(B═B) contributions are responsible for the changes in ΔE(orb) values. All considered molecules of the type LB≡BL, 3-L, exhibit a stronger B≡B bond when compared to a double B═B connection in 2-L (|ΔE(total)| is lower by 11.8-42.5 kcal/mol, depending on the molecule). The main reason is a lower Pauli repulsion contribution noted for 3-CO, 3-PMe(3), and 3-PCl(3) molecules. In addition, in the case of 3-PMe(3) and 3-PCl(3), the orbital interaction term is more stabilizing; however, the effect is less pronounced compared to the drop in the Pauli repulsion term. In all of the systems with double and triple boron-boron bonds, the electronic factor (ΔE(orb)) dominates over the electrostatic contribution (ΔE(elstat)). Finally, the strongest B

  2. Novel insights into the mitochondrial permeability transition

    PubMed Central

    Bonora, Massimo; Bravo-San Pedro, José Manuel; Kroemer, Guido; Galluzzi, Lorenzo; Pinton, Paolo

    2014-01-01

    Alavian and colleagues recently provided further evidence in support of the notion that the c subunit of the mitochondrial F1FO ATP synthase constitutes the long-sought pore-forming unit of the supramolecular complex responsible for the so-called ‘mitochondrial permeability transition’ (MPT). Besides shedding new light on the molecular mechanisms that underlie the MPT, these findings corroborate the notion that several components of the cell death machinery, including cytochrome c and the F1FO ATP synthase, mediate critical metabolic activities. PMID:25486353

  3. Insights on STEM Careers

    SciTech Connect

    Wendelberger, Joanne Roth

    2014-11-05

    This presentation will provide career advice for individuals seeking to go beyond just having a job to building a successful career in the areas of Science, Technology, Engineering, and Mathematics. Careful planning can be used to turn a job into a springboard for professional advancement and personal satisfaction. Topics to be addressed include setting priorities, understanding career ladders, making tough choices, overcoming stereotypes and assumptions by others, networking, developing a professional identify, and balancing a career with family and other personal responsibilities. Insights on the transition from individual technical work to leadership will also be provided. The author will draw upon experiences gained in academic, industrial, and government laboratory settings, as well as extensive professional service and community involvement.

  4. Transition Planning

    ERIC Educational Resources Information Center

    Statfeld, Jenna L.

    2011-01-01

    Post-school transition is the movement of a child with disabilities from school to activities that occur after the completion of school. This paper provides information about: (1) post-school transition; (2) transition plan; (3) transition services; (4) transition planning; (5) vocational rehabilitation services; (6) services that are available…

  5. An allolactose trapped at the lacZ β-galactosidase active site with its galactosyl moiety in a (4)H3 conformation provides insights into the formation, conformation, and stabilization of the transition state.

    PubMed

    Wheatley, Robert W; Huber, Reuben E

    2015-12-01

    When lactose was incubated with G794A-β-galactosidase (a variant with a "closed" active site loop that binds transition state analogs well) an allolactose was trapped with its Gal moiety in a (4)H3 conformation, similar to the oxocarbenium ion-like conformation expected of the transition state. The numerous interactions formed between the (4)H3 structure and β-galactosidase indicate that this structure is representative of the transition state. This conformation is also very similar to that of d-galactono-1,5-lactone, a good transition state analog. Evidence indicates that substrates take up the (4)H3 conformation during migration from the shallow to the deep mode. Steric forces utilizing His418 and other residues are important for positioning the O1 leaving group into a quasi-axial position. An electrostatic interaction between the O5 of the distorted Gal and Tyr503 as well as C-H-π bonds with Trp568 are also significant. Computational studies of the energy of sugar ring distortion show that the β-galactosidase reaction itinerary is driven by energetic considerations in utilization of a (4)H3 transition state with a novel (4)C1-(4)H3-(4)C1 conformation itinerary. To our knowledge, this is the first X-ray crystallographic structural demonstration that the transition state of a natural substrate of a glycosidase has a (4)H3 conformation.

  6. An allolactose trapped at the lacZ β-galactosidase active site with its galactosyl moiety in a (4)H3 conformation provides insights into the formation, conformation, and stabilization of the transition state.

    PubMed

    Wheatley, Robert W; Huber, Reuben E

    2015-12-01

    When lactose was incubated with G794A-β-galactosidase (a variant with a "closed" active site loop that binds transition state analogs well) an allolactose was trapped with its Gal moiety in a (4)H3 conformation, similar to the oxocarbenium ion-like conformation expected of the transition state. The numerous interactions formed between the (4)H3 structure and β-galactosidase indicate that this structure is representative of the transition state. This conformation is also very similar to that of d-galactono-1,5-lactone, a good transition state analog. Evidence indicates that substrates take up the (4)H3 conformation during migration from the shallow to the deep mode. Steric forces utilizing His418 and other residues are important for positioning the O1 leaving group into a quasi-axial position. An electrostatic interaction between the O5 of the distorted Gal and Tyr503 as well as C-H-π bonds with Trp568 are also significant. Computational studies of the energy of sugar ring distortion show that the β-galactosidase reaction itinerary is driven by energetic considerations in utilization of a (4)H3 transition state with a novel (4)C1-(4)H3-(4)C1 conformation itinerary. To our knowledge, this is the first X-ray crystallographic structural demonstration that the transition state of a natural substrate of a glycosidase has a (4)H3 conformation. PMID:26291713

  7. Transiting Exoplanets

    NASA Astrophysics Data System (ADS)

    Haswell, Carole A.

    2010-07-01

    1. Our solar system from afar; 2. Exoplanet discoveries by the transit method; 3. What the transit lightcurve tells us; 4. The transiting exoplanet population; 5. Transmission spectroscopy and Rossiter-McLaughlin effect; 6. Secondary eclipses and phase variations; 7. Transit timing variations and orbital dynamics; 8. Brave new worlds: the future; Index.

  8. Initiation stage of alkene metathesis: Insights from natural bond orbital and charge decomposition analyses

    NASA Astrophysics Data System (ADS)

    Paredes-Gil, Katherine; Jaque, Pablo

    2015-01-01

    The Rusbnd PR3 bonds of 1-2(a-b)-PC, Rudbnd CHPh bonds of 1a-b, 2-Inact/Act and 1a-b, 2-RCB were analyzed by charge decomposition (CDA) and natural bond orbital (NBO). We have found that the dissociation step of the Rusbnd PR3 bond is driven by charge transfer, while the RCB by polarization effects. Furthermore, the π(Cipso)-π*(Rudbnd C) interaction was associated with delocalization effects in the benzylidene ring. Likewise, the nature of the rotameric changes in the carbene was studied through the resonance stabilization energy (ENLW). 2 presented a lower ΔENLW (Inactive → Active) than 1a-b, which confirms that the delocalization effects are related to a low carbene rotameric energy.

  9. Late Pleistocene to Holocene river terrace deformation within the Little Salmon Fault Zone: insights to tectonic transition from Cascadia Subduction to San Andreas transform stress regimes, Van Duzen river, Northern California

    NASA Astrophysics Data System (ADS)

    Nicovich, S.; Hemphill-Haley, M. A.; Leroy, T. H.

    2014-12-01

    The southern Cascadia subduction zone (CSZ) of northwestern California exhibits northeast-directed contraction, transitioning to north-northwest directed translation within the broad San Andreas fault (SAF) transform margin to the south. The Little Salmon fault (LSF) is one of the southern-most, active thrust faults within the onshore fold and thrust belt of the CSZ, and lies proximal to the transition from compressional to dextral stress across the Mendocino Triple Junction. Thus, it is an ideal location to characterize strain associated with this complex region of transitional stress regimes. High precision topographic data (LiDAR) enabled detailed mapping of geomorphic features that would otherwise be obscured by dense vegetation of the area. A northwest trending lineament, sub-parallel and south of the main splay of the LSF is observed on LiDAR imagery. The lineament exhibits potential up-to-the-northeast offset and traverses several Van Duzen river terrace risers and treads that range from Pleistocene to potentially Holocene in age. A shallow, exploratory trench was hand-excavated across the lineament. The shallow, roughly 1.5 m-deep, 16 m-long trench exposed imbricated gravels that dip into the base of the trench in the upper end. Coring within the lower end of the trench mapped the southern extent of the gravels. The architecture of the unconsolidated, clast-supported gravel deposit displays a diffuse up-to-the-northeast step. More obvious offset may be expressed at lower depths and/or in mediums with more confining stress. The linear map expression of the lineament across relatively steep terrain suggests that the fault may be relatively steeply dipping. Conjugate deformation shear bands within Neogene bedrock nearby along the Van Duzen river provide additional information about the state of stress within this area of transition.

  10. Electronic structure, optical properties and the mechanism of the B3-B8 phase transition of BeSe: insights from hybrid functionals, lattice dynamics and NPH molecular dynamics.

    PubMed

    Dutta, Rajkrishna; Alptekin, Sebahaddin; Mandal, Nibir

    2013-03-27

    We have investigated the electronic structure and the mechanism of the pressure induced phase transition of beryllium selenide (BeSe) by employing a first-principles pseudopotential method within the framework of density functional theory. Our study demonstrates that use of the hybrid PBE0 functional (PBE stands for Perdew, Burke and Ernzerhof) leads to significant improvement in the band gap calculations, compared to those using either of the common density functionals (local density approximation (LDA) and generalized gradient approximation (GGA)), which severely underestimate the band gap of BeSe. The band gap obtained from the hybrid PBE0 functional shows excellent agreement with available experimental data. A constant-pressure (NPH) first-principles molecular dynamics (FPMD) approach has been adopted to characterize the first-order pressure induced phase transition from the zinc blende (ZB) to the nickel arsenide (NiAs) structure. We have shown that the FPMD simulation overestimates the transition pressure P(T) (compared to static enthalpy and experimental data) due to overpressure in the simulation box. The MD simulation reveals the structural pathway (cubic → orthorhombic → monoclinic → hexagonal), leading from the ZB phase to the NiAs phase. To find an explanation for the phase transition we calculated the vibrational and elastic properties under pressure. Negative Grüneisen parameters were obtained for the transverse acoustic phonon modes at the X and L high symmetry points. However, no mechanical instability or imaginary frequencies were found at pressures near P(T). Thus the transition results from a thermodynamic instability rather than an elastic/dynamical one. We have also calculated the optical properties of both the B3 and B8 phases, such as the real and imaginary parts of the dielectric constant, reflectivity, loss function and refractive index, and compared them with the existing experimental and theoretical data. An abrupt decrease is

  11. Proofs that Develop Insight

    ERIC Educational Resources Information Center

    Weber, Keith

    2010-01-01

    Many mathematics educators have noted that mathematicians do not only read proofs to gain conviction but also to obtain insight. The goal of this article is to discuss what this insight is from mathematicians' perspective. Based on interviews with nine research-active mathematicians, two sources of insight are discussed. The first is reading a…

  12. Kohler's Insight Revisited.

    ERIC Educational Resources Information Center

    Windholtz, George

    1985-01-01

    Psychology textbooks frequently present Wolfgang Kohler's two-stick experiment with chimpanzees as having demonstrated insight in learning. Studies that replicated Kohler's work support his findings but not his interpretation in terms of insightful solution. The uncritical inclusion of Kohler's insight interpretation in texts is not warranted in…

  13. Mechanistic Insights into C-H Oxidations by Ruthenium(III)-Pterin Complexes: Impact of Basicity of the Pterin Ligand and Electron Acceptability of the Metal Center on the Transition States.

    PubMed

    Mitome, Hiroumi; Ishizuka, Tomoya; Kotani, Hiroaki; Shiota, Yoshihito; Yoshizawa, Kazunari; Kojima, Takahiko

    2016-08-01

    A ruthenium(II) complex, [Ru(dmdmp)Cl(MeBPA)] (2) (Hdmdmp = N,N-dimethyl-6,7-dimethylpterin, MeBPA = N-methyl-N,N-bis(pyridylmethyl)amine), having a pterin derivative as a proton-accepting ligand, was synthesized and characterized. Complex 2 shows higher basicity than that of a previously reported Ru(II)-pterin complex, [Ru(dmdmp) (TPA)](+) (1) (TPA = tris(2-pyridylmethyl)amine). On the other hand, 1e(-)-oxidized species of 1 (1OX) exhibits higher electron-acceptability than that of 1e(-)-oxidized 2 (2OX). Bond dissociation enthalpies (BDE) of the two Ru(II) complexes having Hdmdmp as a ligand in proton-coupled electron transfer (PCET) to generate 1OX and 2OX were calculated to be 85 kcal mol(-1) for 1OX and 78 kcal mol(-1) for 2OX. The BDE values are large enough to perform H atom transfer from C-H bonds of organic molecules to the 1e(-)-oxidized complexes through PCET. The second-order rate constants (k) of PCET oxidation reactions were determined for 1OX and 2OX. The logarithms of normalized k values were proportional to the BDE values of C-H bonds of the substrates with slopes of -0.27 for 1OX and -0.44 for 2OX. The difference between 1OX and 2OX in the slopes suggests that the transition states in PCET oxidations of substrates by the two complexes bear different polarization, as reflection of difference in the electron acceptability and basicity of 1OX and 2OX. The more basic 2OX attracts a proton from a C-H bond via a more polarized transition state than that of 1OX; on the contrary, the more electron-deficient 1OX forms less polarized transition states in PCET oxidation reactions of C-H bonds.

  14. Examining hydrogen transitions.

    SciTech Connect

    Plotkin, S. E.; Energy Systems

    2007-03-01

    This report describes the results of an effort to identify key analytic issues associated with modeling a transition to hydrogen as a fuel for light duty vehicles, and using insights gained from this effort to suggest ways to improve ongoing modeling efforts. The study reported on here examined multiple hydrogen scenarios reported in the literature, identified modeling issues associated with those scenario analyses, and examined three DOE-sponsored hydrogen transition models in the context of those modeling issues. The three hydrogen transition models are HyTrans (contractor: Oak Ridge National Laboratory), MARKAL/DOE* (Brookhaven National Laboratory), and NEMS-H2 (OnLocation, Inc). The goals of these models are (1) to help DOE improve its R&D effort by identifying key technology and other roadblocks to a transition and testing its technical program goals to determine whether they are likely to lead to the market success of hydrogen technologies, (2) to evaluate alternative policies to promote a transition, and (3) to estimate the costs and benefits of alternative pathways to hydrogen development.

  15. New insights for the Late Pleistocene to Mid Holocene landscape reconstruction in the Western part of the Thessaloniki Plain (Greece): evidence for an abrupt transition and consequences on the settling history

    NASA Astrophysics Data System (ADS)

    Psomiadis, D.; Ghilardi, M.; Demory, F.; Delanghe-Sabatier, D.

    2012-04-01

    The Neolithic site of Nea Nikomideia is located at the western limit of the Thessaloniki Plain, Northern Greece and the archaeological excavations conducted in the 1960s suggested that the settlement was located close to an ancient coastline during its early occupation. Recently published results indicated that palaeoenvironmental transitions in the area influenced the human occupation from the early Holocene (6000/5800 cal. B.C.). It was also established that a freshwater lake occupied the vicinity of the Neolithic settlement at the early stages (Ghilardi et al., under press). However, the Late Pleistocene landscape configuration has not been clearly established, despite of some attempts (Lykousis, 2001). This study presents new data, which are correlated with more densely dated proxies in order to thoroughly investigate the Late Pleistocene - Holocene transition as well as the impact of following environmental alterations on the settlement. Special attention is given on periods of soil coverage which are considered indicative of periods with favourable conditions for human occupation. A new sequence is used, based on 3 new boreholes, for laser grain size analysis, loss-on-ignition and carbonate content, magnetic susceptibility measurements, microfaunal inspection and radiocarbon datings (A.M.S.) and it is intercorrelated with other sequences from the area. The synthesis of the proxies reveals distinct events of palaeoenvironmental alterations in a very well constructed chronostratigraphic framework of more than 10.000 years. The Pleistocene subsurface is found in circa 9 meters deep and clearly indicates the presence of a large alluvial fan deposition (calm environment) from Aliakmon River. The abrupt transition with early Holocene sediments reveals that an important influx of fresh water helped in creating a limnic environment of deposition. From Neolithic times to the present day, the area turned into a marine bay and subsequently into a freshwater lake where

  16. Insights on semiconductor-metal transition in indium-doped zinc oxide from x-ray photoelectron spectroscopy, time-of-flight secondary ion mass spectrometry and x-ray diffraction

    NASA Astrophysics Data System (ADS)

    Saw, K. G.; Aznan, N. M.; Yam, F. K.; Ng, S. S.; Pung, S. Y.

    2016-07-01

    ZnO thin films doped with various amounts of In impurities were prepared by magnetron sputtering at a substrate temperature of 150°C. The shift in optical bandgap of the In-doped ZnO films is studied as a function of carrier concentration. Nominally doped ZnO films exhibit an increase in the measured optical band gap known as the Burstein-Moss effect. Dominant band gap narrowing is observed with increased doping. XPS and TOFSIMS analyses confirm that In is incorporated in the ZnO material. The In 3d peaks show that no metallic In is present as a result of heavy doping. The XRD phase analysis shows a preferential c-axis growth but a shift of the ZnO (002) peak to lower 2-theta values with increasing FWHM as the carrier concentration increases indicates the decline in the quality of crystallinity. An elongation of the c lattice constant is also observed and is likely to be caused by intersitital In as the amount of In dopants increases. The incorporation of In induces a semiconductor-metal transition between the carrier concentrations of 3.58 - 5.61×1019 cm-3 and structural changes in the ZnO host material.

  17. Transitional Care

    ERIC Educational Resources Information Center

    Naylor, Mary; Keating, Stacen A.

    2008-01-01

    Transitional care encompasses a broad range of services and environments designed to promote the safe and timely passage of patients between levels of health care and across care settings. High-quality transitional care is especially important for older adults with multiple chronic conditions and complex therapeutic regimens, as well as for their…

  18. Newborn transition.

    PubMed

    Graves, Barbara W; Haley, Mary Mumford

    2013-01-01

    The transition from intrauterine to extrauterine life is a complex adaptation. Although, in a sense, the entire time in utero is in preparation for this transition, there are many specific anatomic and physiologic changes that take place in the weeks and days leading up to labor that facilitate a healthy transition. Some, including increasing pulmonary vasculature and blood flow, are part of an ongoing process of maturation. Others, such as a reversal in the lung from secreting fluid to absorbing fluid and the secretion of pulmonary surfactant, are associated with the hormonal milieu that occurs when spontaneous labor is impending. Interventions such as elective cesarean birth or induction of labor may interfere with this preparation for birth. Postnatal interventions such as immediate clamping of the umbilical cord and oropharyngeal suction may also compromise the normal process of newborn transition. This article reviews the physiology of the fetal to newborn transition and explores interventions that may facilitate or hinder the optimal process.

  19. Tectonic transition from Late Carboniferous subduction to Early Permian post-collisional extension in the Eastern Tianshan, NW China: Insights from geochronology and geochemistry of mafic-intermediate intrusions

    NASA Astrophysics Data System (ADS)

    Zhang, Xiaoran; Zhao, Guochun; Eizenhöfer, Paul R.; Sun, Min; Han, Yigui; Hou, Wenzhu; Liu, Dongxing; Wang, Bo; Liu, Qian; Xu, Bing; Zhu, Chloe Yanlin

    2016-07-01

    a tectonic transition from oceanic subduction to post-collisional extension during Late Carboniferous to Early Permian time, probably triggered by the closure of the Junggar Ocean and subsequent arc-continent collision between the Central Tianshan and Junggar terranes that gave rise to the final assembly of the Eastern Tianshan.

  20. William Crabtree's Venus transit observation

    NASA Astrophysics Data System (ADS)

    Kollerstrom, Nicholas

    2005-04-01

    The close collaboration between the two North-country astronomers Jeremiah Horrocks and William Crabtree gave them special insight into the new astronomy published by the recently-deceased Kepler, whereby Horrocks became the only person to apprehend that the Rudolphine tables were in fact predicting a Venus transit in 1639. This paper focuses especially upon William Crabtree's role and contribution. A comparison is made with an earlier, unsuccessful endeavour by these two concerning a possible transit of Mercury. Much of the record of their work was lost during the civil war. Finally, thanks to Christiaan Huygens, Horrock's manuscript was published by Johannes Hevelius in Danzig, in 1662.

  1. Metric transition

    NASA Technical Reports Server (NTRS)

    1992-01-01

    This report describes NASA's metric transition in terms of seven major program elements. Six are technical areas involving research, technology development, and operations; they are managed by specific Program Offices at NASA Headquarters. The final program element, Institutional Management, covers both NASA-wide functional management under control of NASA Headquarters and metric capability development at the individual NASA Field Installations. This area addresses issues common to all NASA program elements, including: Federal, state, and local coordination; standards; private industry initiatives; public-awareness initiatives; and employee training. The concluding section identifies current barriers and impediments to metric transition; NASA has no specific recommendations for consideration by the Congress.

  2. Dreaming and insight

    PubMed Central

    Edwards, Christopher L.; Ruby, Perrine M.; Malinowski, Josie E.; Bennett, Paul D.; Blagrove, Mark T.

    2013-01-01

    This paper addresses claims that dreams can be a source of personal insight. Whereas there has been anecdotal backing for such claims, there is now tangential support from findings of the facilitative effect of sleep on cognitive insight, and of REM sleep in particular on emotional memory consolidation. Furthermore, the presence in dreams of metaphorical representations of waking life indicates the possibility of novel insight as an emergent feature of such metaphorical mappings. In order to assess whether personal insight can occur as a result of the consideration of dream content, 11 dream group discussion sessions were conducted which followed the Ullman Dream Appreciation technique, one session for each of 11 participants (10 females, 1 male; mean age = 19.2 years). Self-ratings of deepened self-perception and personal gains from participation in the group sessions showed that the Ullman technique is an effective procedure for establishing connections between dream content and recent waking life experiences, although wake life sources were found for only 14% of dream report text. The mean Exploration-Insight score on the Gains from Dream Interpretation questionnaire was very high and comparable to outcomes from the well-established Hill (1996) therapist-led dream interpretation method. This score was associated between-subjects with pre-group positive Attitude Toward Dreams (ATD). The need to distinguish “aha” experiences as a result of discovering a waking life source for part of a dream, from “aha” experiences of personal insight as a result of considering dream content, is discussed. Difficulties are described in designing a control condition to which the dream report condition can be compared. PMID:24550849

  3. Statistical insight: a review.

    PubMed

    Vardell, Emily; Garcia-Barcena, Yanira

    2012-01-01

    Statistical Insight is a database that offers the ability to search across multiple sources of data, including the federal government, private organizations, research centers, and international intergovernmental organizations in one search. Two sample searches on the same topic, a basic and an advanced, were conducted to evaluate the database.

  4. Changing Schools: Insights.

    ERIC Educational Resources Information Center

    Office of Policy and Planning (ED), Washington, DC.

    Over 1,000 communities in 45 states, territories, and the District of Columbia, are mobilized under the AMERICA 2000 banner to reach the 6 National Education Goals. This collection of papers, written by those who have wrestled with the process of school reform, offers useful insights to communities as they begin their process of transforming…

  5. [Humanitarian transition].

    PubMed

    Mattei, Jean-François; Troit, Virginie

    2016-02-01

    In two centuries, modern humanitarian action has experienced several fractures often linked to crises. Although its professionalism and intervention force remain indisputable, it faces, since the 2000s, a new context that limits its ability to act and confronts it with new dilemmas, even though it must deal with needs for aid of unprecedented scale. These difficulties reveal a humanitarian transition period that was not anticipated. This transition period reflects the change from a dominant paradigm of North-South solidarity of Western origin to a much more complex model. This article provides a summary of the current mutations that are dominated by the States' assertion of sovereignty. Among the possible solutions, it argues for an ethical approach and a better integration of the research carried out in the Global South, prerequisites for building a true partnership and placing the victims at the heart of the operations which involve them. PMID:26936180

  6. Eliminating Transitions

    ERIC Educational Resources Information Center

    Gallick, Barb; Lee, Lisa

    2010-01-01

    Adults often find themselves transitioning from one activity to another in a short time span. Most of the time, they do not feel they have a lot of control over their schedules, but wish that they could carve out extended time to relax and focus on one project. Picture a group of children in the block area who have spent 15 or 20 minutes building…

  7. Implementation of Insight Responsibilities in Process Engineering

    NASA Technical Reports Server (NTRS)

    Osborne, Deborah M.

    1997-01-01

    This report describes an approach for evaluating flight readiness (COFR) and contractor performance evaluation (award fee) as part of the insight role of NASA Process Engineering at Kennedy Space Center. Several evaluation methods are presented, including systems engineering evaluations and use of systems performance data. The transition from an oversight function to the insight function is described. The types of analytical tools appropriate for achieving the flight readiness and contractor performance evaluation goals are described and examples are provided. Special emphasis is placed upon short and small run statistical quality control techniques. Training requirements for system engineers are delineated. The approach described herein would be equally appropriate in other directorates at Kennedy Space Center.

  8. Resolving Conformational and Rotameric Exchange in Spin-Labeled Proteins Using Saturation Recovery EPR

    PubMed Central

    Bridges, Michael D.; Hideg, Kálmán

    2010-01-01

    The function of many proteins involves equilibria between conformational substates, and to elucidate mechanisms of function it is essential to have experimental tools to detect the presence of conformational substates and to determine the time scale of exchange between them. Site-directed spin labeling (SDSL) has the potential to serve this purpose. In proteins containing a nitroxide side chain (R1), multicomponent electron paramagnetic resonance (EPR) spectra can arise either from equilibria involving different conformational substates or rotamers of R1. To employ SDSL to uniquely identify conformational equilibria, it is thus essential to distinguish between these origins of multicomponent spectra. Here we show that this is possible based on the time scale for exchange of the nitroxide between distinct environments that give rise to multicomponent EPR spectra; rotamer exchange for R1 lies in the ≈0.1–1 μs range, while conformational exchange is at least an order of magnitude slower. The time scales of exchange events are determined by saturation recovery EPR, and in favorable cases, the exchange rate constants between substates with lifetimes of approximately 1–70 μs can be estimated by the approach. PMID:20157634

  9. The Three Possible 2-(Pyrenylethynyl) Adenosines: Rotameric Energy Barriers Govern the Photodynamics of These Structural Isomers.

    PubMed

    Reuss, Andreas J; Grünewald, Christian; Braun, Markus; Engels, Joachim W; Wachtveitl, Josef

    2016-05-01

    This article presents a comprehensive study of the photophysics of 2-(2-pyrenylethynyl) adenosine and 2-(4-pyrenylethynyl) adenosine, which are structural isomers of the well-established fluorescent RNA label 2-(1-pyrenylethynyl) adenosine. We performed steady-state and ultrafast transient absorption spectroscopy studies along with time-resolved fluorescence emission experiments in different solvents to work out the interplay of locally excited and charge-transfer states. We found the ultrafast photodynamics to be crucial for the fluorescence decay behavior, which extends up to tens of nanoseconds and is partially multi-exponential. These features in the ultrafast dynamics are indicative of the rotational energy barriers in the first excited state.

  10. Death: 'nothing' gives insight.

    PubMed

    Ettema, Eric J

    2013-08-01

    According to a widely accepted belief, we cannot know our own death--death means 'nothing' to us. At first sight, the meaning of 'nothing' just implies the negation or absence of 'something'. Death then simply refers to the negation or absence of life. As a consequence, however, death has no meaning of itself. This leads to an ontological paradox in which death is both acknowledged and denied: death is … nothing. In this article, I investigate whether insight into the ontological paradox of the nothingness of death can contribute to a good end-of-life. By analysing Aquinas', Heidegger's and Derrida's understanding of death as nothingness, I explore how giving meaning to death on different ontological levels connects to, and at the same time provides resistance against, the harsh reality of death. By doing so, I intend to demonstrate that insight into the nothingness of death can count as a framework for a meaningful dealing with death.

  11. Update on INSIGHTS Development

    SciTech Connect

    Not Listed; Eric Burgett

    2011-09-01

    INSIGHTS is a transformational separate effects testing capability to perform in situ irradiation studies and characterization of the microscale behavior of nuclear fuel materials under a wide variety of in-pile conditions. Separate effects testing including growth, irradiation, and monitoring of these materials, and encompasses the full science based approach for fuels development from the nanoscale to the mesoscale behavior of the sample material and other defects driven by the modeling and simulation efforts of INL.

  12. The politics of insight.

    PubMed

    Salvi, Carola; Cristofori, Irene; Grafman, Jordan; Beeman, Mark

    2016-01-01

    Previous studies showed that liberals and conservatives differ in cognitive style. Liberals are more flexible, and tolerant of complexity and novelty, whereas conservatives are more rigid, are more resistant to change, and prefer clear answers. We administered a set of compound remote associate problems, a task extensively used to differentiate problem-solving styles (via insight or analysis). Using this task, several researches have proven that self-reports, which differentiate between insight and analytic problem-solving, are reliable and are associated with two different neural circuits. In our research we found that participants self-identifying with distinct political orientations demonstrated differences in problem-solving strategy. Liberals solved significantly more problems via insight instead of in a step-by-step analytic fashion. Our findings extend previous observations that self-identified political orientations reflect differences in cognitive styles. More specifically, we show that type of political orientation is associated with problem-solving strategy. The data converge with previous neurobehavioural and cognitive studies indicating a link between cognitive style and the psychological mechanisms that mediate political beliefs. PMID:26810954

  13. The politics of insight

    PubMed Central

    Salvi, Carola; Cristofori, Irene; Grafman, Jordan; Beeman, Mark

    2016-01-01

    Previous studies showed that liberals and conservatives differ in cognitive style. Liberals are more flexible, and tolerant of complexity and novelty, whereas conservatives are more rigid, are more resistant to change, and prefer clear answers. We administered a set of compound remote associate problems, a task extensively used to differentiate problem-solving styles (via insight or analysis). Using this task, several researches have proven that self-reports, which differentiate between insight and analytic problem-solving, are reliable and are associated with two different neural circuits. In our research we found that participants self-identifying with distinct political orientations demonstrated differences in problem-solving strategy. Liberals solved significantly more problems via insight instead of in a step-by-step analytic fashion. Our findings extend previous observations that self-identified political orientations reflect differences in cognitive styles. More specifically, we show that type of political orientation is associated with problem-solving strategy. The data converge with previous neurobehavioural and cognitive studies indicating a link between cognitive style and the psychological mechanisms that mediate political beliefs. PMID:26810954

  14. Adaptation to Transition: Implications for Working with Cult Members.

    ERIC Educational Resources Information Center

    Robinson, Beth; Bradley, Loretta J.

    1998-01-01

    Notes that because individuals experiencing transitions seem to be particularly susceptible to cult membership, developing insight and resources to cope with transition must be an integral part of strategies to prevent cult membership. Discusses interventions focusing on treatment of former cult members are . (Author/MKA)

  15. Effect of adduct formation with molecular nitrogen on the measured collisional cross sections of transition metal-1,10-phenanthroline complexes in traveling wave ion-mobility spectrometry: N2 is not always an "inert" buffer gas.

    PubMed

    Rijs, Nicole J; Weiske, Thomas; Schlangen, Maria; Schwarz, Helmut

    2015-10-01

    The number of separations and analyses of molecular species using traveling wave ion-mobility spectrometry-mass spectrometry (TWIMS-MS) is increasing, including those extending the technique to analytes containing metal atoms. A critical aspect of such applications of TWIMS-MS is the validity of the collisional cross sections (CCSs) measured and whether they can be accurately calibrated against other ion-mobility spectrometry (IMS) techniques. Many metal containing species have potential reactivity toward molecular nitrogen, which is present in high concentration in the typical Synapt-G2 TWIMS cell. Here, we analyze the effect of nitrogen on the drift time of a series of cationic 1,10-phenanthroline complexes of the late transition metals, [(phen)M](+), (M = Ni, Pd, Pt, Cu, Ag, Au, Zn, Cd, and Hg) in order to understand potential deviations from expected drift time behaviors. These metal complexes were chosen for their metal open-coordination site and lack of rotameric species. The target species were generated via electrospray ionization (ESI), analyzed using TWIMS in N2 drift gas, and the observed drift time trends compared. Theoretically derived CCSs for all species (via both the projection approximation and trajectory method) were also compared. The results show that, indeed, for metal containing species in this size regime, reaction with molecular nitrogen has a dramatic effect on measured drift times and must not be ignored when comparing and interpreting TWIMS arrival time distributions. Density-functional theory (DFT) calculations are employed to analyze the periodic differences due to the metal's interaction with nitrogen (and background water) in detail. PMID:26378338

  16. Cementoenamel junction: An insight.

    PubMed

    Vandana, Kharidi Laxman; Haneet, Ryana Kour

    2014-09-01

    The location and nature of cemento-enamel junction (CEJ) are more than descriptive terms used simply to describe some aspects of tooth morphology; however, CEJ gains a lot of clinical significance due to various measurements dependent on it. It may be necessary to determine the location and pathological changes occurring at CEJ to make a diagnosis and treat diseases pertaining to epithelial attachment and gingival margin. However, the information related to CEJ is not discussed commonly. Hence, the present review paper provides an insight on CEJ in both primary and permanent dentition. PMID:25425813

  17. Cementoenamel junction: An insight

    PubMed Central

    Vandana, Kharidi Laxman; Haneet, Ryana Kour

    2014-01-01

    The location and nature of cemento-enamel junction (CEJ) are more than descriptive terms used simply to describe some aspects of tooth morphology; however, CEJ gains a lot of clinical significance due to various measurements dependent on it. It may be necessary to determine the location and pathological changes occurring at CEJ to make a diagnosis and treat diseases pertaining to epithelial attachment and gingival margin. However, the information related to CEJ is not discussed commonly. Hence, the present review paper provides an insight on CEJ in both primary and permanent dentition. PMID:25425813

  18. Modeling for Insights

    SciTech Connect

    Jacob J. Jacobson; Gretchen Matthern

    2007-04-01

    System Dynamics is a computer-aided approach to evaluating the interrelationships of different components and activities within complex systems. Recently, System Dynamics models have been developed in areas such as policy design, biological and medical modeling, energy and the environmental analysis, and in various other areas in the natural and social sciences. The real power of System Dynamic modeling is gaining insights into total system behavior as time, and system parameters are adjusted and the effects are visualized in real time. System Dynamic models allow decision makers and stakeholders to explore long-term behavior and performance of complex systems, especially in the context of dynamic processes and changing scenarios without having to wait decades to obtain field data or risk failure if a poor management or design approach is used. The Idaho National Laboratory recently has been developing a System Dynamic model of the US Nuclear Fuel Cycle. The model is intended to be used to identify and understand interactions throughout the entire nuclear fuel cycle and suggest sustainable development strategies. This paper describes the basic framework of the current model and presents examples of useful insights gained from the model thus far with respect to sustainable development of nuclear power.

  19. Interband Transitions

    NASA Astrophysics Data System (ADS)

    Varma, Shikha

    We have studied thin (1-7 monolayer) overlayers of Hg on Ag(100) and Cu(100) using angle-resolved photoemission and low energy electron diffraction. We have investigated the electronic states of well ordered, disordered and the liquid overlayers of mercury. We show that the electronic structure of the well ordered overlayers is very different than that of the disordered and the liquid overlayers. The well ordered overlayers of Hg on Ag(100) exhibit a new electronic state which is absent for the disordered overlayers of mercury as well as for gaseous mercury. We will argue that this new Hg state is a result of the interaction among the Hg-Hg atoms, when adsorbed on Ag(100). The strain among adlayer atoms also plays a crucial role in the development of the new electronic state. We have used the synchrotron radiation to study the partial cross-section and the branching ratio of the 5d electronic state of Hg. We have measured the partial cross-section and branching ratio of the well-ordered, disordered and liquid overlayers of mercury on Ag(100) and Cu(100). We have observed resonances in the photoemission intensities of the mercury 5d orbitals for thin films of mercury for incident photon energies near the 5p _{3/2}, 4f_{7/2 } and 4f_{5/2} thresholds. The results indicate that interband transitions from the 5p and 4f levels to the 5d orbitals can occur for a thin overlayer of mercury, as a result of final state 5f contributions, though such interband transitions are forbidden for the free isolated Hg atom. These resonances are attributed to the formation of a solid state band structure incorporating new itinerant mercury electronic state. These resonances are absent when the mercury film is disordered or melted. We have measured the branching ratio of the 5d orbital for thin mercury overlayers in the photon energy range between 26 to 105 eV. The branching ratios deviate from the nonrelativistic statistical value of 1.5, reaching values of 8.0. These results indicate

  20. Quantifying macromolecular conformational transition pathways

    NASA Astrophysics Data System (ADS)

    Seyler, Sean; Kumar, Avishek; Thorpe, Michael; Beckstein, Oliver

    2015-03-01

    Diverse classes of proteins function through large-scale conformational changes that are challenging for computer simulations. A range of fast path-sampling techniques have been used to generate transitions, but it has been difficult to compare paths from (and assess the relative strengths of) different methods. We introduce a comprehensive method (pathway similarity analysis, PSA) for quantitatively characterizing and comparing macromolecular pathways. The Hausdorff and Fréchet metrics (known from computational geometry) are used to quantify the degree of similarity between polygonal curves in configuration space. A strength of PSA is its use of the full information available from the 3 N-dimensional configuration space trajectory without requiring additional specific knowledge about the system. We compare a sample of eleven different methods for the closed-to-open transitions of the apo enzyme adenylate kinase (AdK) and also apply PSA to an ensemble of 400 AdK trajectories produced by dynamic importance sampling MD and the Geometrical Pathways algorithm. We discuss the method's potential to enhance our understanding of transition path sampling methods, validate them, and help guide future research toward deeper physical insights into conformational transitions.

  1. Osho - Insights on sex

    PubMed Central

    Nagaraj, Anil Kumar Mysore

    2013-01-01

    Sex is a mysterious phenomenon, which has puzzled even great sages. Human beings have researched and mastered the biology of sex. But that is not all. Sex needs to be understood from the spiritual perspective too. The vision of Osho is an enlightening experience in this regard. Out of the thousands of lectures, five lectures on sex made Osho most notorious. Born into a Jain family of Madhya Pradesh, Rajneesh, who later wanted himself to be called Osho, is a great master. He has spoken volumes on a wide range of topics ranging from sex to super-consciousness. His contributions in the area of sex are based on the principles of “Tantra” which has its origin from Buddhism. This article focuses on his life and insights on sex, which if understood properly, can be a stepping stone for enlightenment. PMID:23858266

  2. Understanding age-based transition needs: Perspectives from adolescents and adults with congenital heart disease

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The purpose of this study was to explore the transition process in congenital heart disease (CHD) care through the perceived needs and concerns of adolescents (pretransition) and the experiential insight from adults (post-transition), in order to inform future transition initiatives and information ...

  3. Transitions: A Personal Perspective.

    ERIC Educational Resources Information Center

    Wood, Ann Stace

    1995-01-01

    Distinguishes between unchosen transitions (children maturing and leaving, parents aging, companies downsizing) and chosen ones (moving, divorce, marriage, career changes). Describes the steps one goes through: uneasiness, renewed energy, complaining, exploration, partial transition, and the completed transition. (JOW)

  4. Searching for Insight

    NASA Astrophysics Data System (ADS)

    Lynden-Bell, Donald

    2010-09-01

    Is space-time only brought into being by its energy content? The jury is still out, but other questions that have been with me for much of my life—giant black holes in galactic nuclei, the formation of the Galaxy, the connection between first-order phase transitions and negative specific heats, the cause of the large-scale flow of galaxies relative to the cosmic microwave background—have all received reasonable answers. I have found great fun in understanding the dynamical mechanisms underlying such phenomena as magnetohydrodynamic jets, relativistic disks, and the bars, spirals, and chemical evolution of galaxies. The great challenges for future astronomers will be the exploration of the 96% of the Universe now believed to be neither atomic nor baryonic but perhaps partially leptonic. However, most advances do not come via frontal attack but from “bread-and-butter” investigations in related areas where observation is possible today!

  5. Grigor Narekatsi's astronomical insights

    NASA Astrophysics Data System (ADS)

    Poghosyan, Samvel

    2015-07-01

    What stand out in the solid system of Gr. Narekatsi's naturalistic views are his astronomical insights on the material nature of light, its high speed and the Sun being composed of "material air". Especially surprising and fascinating are his views on stars and their clusters. What astronomers, including great Armenian academician V. Ambartsumian (scattering of stellar associations), would understand and prove with much difficulty thousand years later, Narekatsi predicted in the 10th century: "Stars appear and disappear untimely", "You who gather and scatter the speechless constellations, like a flock of sheep". Gr. Narekatsti's reformative views were manifested in all the spheres of the 10th century social life; he is a reformer of church life, great language constructor, innovator in literature and music, freethinker in philosophy and science. His ideology is the reflection of the 10th century Armenian Renaissance. During the 9th-10th centuries, great masses of Armenians, forced to migrate to the Balkans, took with them and spread reformative ideas. The forefather of the western science, which originated in the period of Reformation, is considered to be the great philosopher Nicholas of Cusa. The study of Gr. Narekatsti's logic and naturalistic views enables us to claim that Gr. Narekatsti is the great grandfather of European science.

  6. Systemic sclerosis: Recent insights.

    PubMed

    Elhai, Muriel; Avouac, Jérôme; Kahan, André; Allanore, Yannick

    2015-05-01

    Systemic sclerosis is an orphan connective tissue disease characterized by alterations of the microvasculature, disturbances of the immune system and massive deposition of collagen and other matrix substances in the skin and internal organs. A major achievement of the recent years has been the validation of new classification criteria, allowing earlier diagnosis and earlier treatment of systemic sclerosis, before irreversible fibrosis and organ damage appeared ("window of opportunity"). Raynaud's phenomenon is usually the first sign of the disease and is considered as the main sentinel sign for the identification of very early systemic sclerosis. Systemic sclerosis is clinically heterogeneous and disease course remains unpredictable. Its prognosis depends on cardiopulmonary involvement and recent studies aim to identify serum or genetic biomarkers predictive of severe organ involvement. Moreover, the prospective follow-up of large cohorts has provided and will offer critical material to identify strong prognostic factors. Whereas the outcomes of vascular manifestations of the disease has been recently improved due to targeted therapy, recent data have highlighted that mortality has not changed over the past 40 years. This reflects the absence of efficacy of current available drugs to counteract the fibrotic process. Nevertheless, several targeted immunity therapies, commonly with proven efficacy in other immune diseases, are about to be investigated in systemic sclerosis. Indeed, promising results in small and open studies have been reported. This article deals with recent insights into classification criteria, pathogenesis, organ involvements, outcome and current and possible future therapeutic options in systemic sclerosis.

  7. Jet-Supercavity Interaction: Insights from CFD

    NASA Astrophysics Data System (ADS)

    Kinzel, M.; Moeny, M.; Krane, M.; Kirschner, I.

    2015-12-01

    In this work, the interaction between a ventilated supercavity and a jet are examined using computational fluid dynamics (CFD). The CFD model is validated using experimental data, and shows to capture the correct trend in the bulk cavity behavior (qualitatively and quantitatively). Using these models, a number of novel insights into the physical characteristics of the interaction are developed. These interactions are described by: (1) the jet gas and ventilation gas poorly mix within the cavity, (2) the jet appears to cause additional gas leakage by transitioning the cavity from a recirculating flow to an axial flow, (3) the jet has the ability to lengthen the cavity, and (4) the jet invokes wake instabilities that drive cavity pulsation. These phenomena are documented and discussed in the following paper.

  8. Recent Neurobiological Insights into the Concept of Insight in Psychosis

    PubMed Central

    Mythri, Starlin Vijay; Sanjay, Y

    2016-01-01

    The concept of insight in psychosis has been an interesting area in clinical psychiatry for well over a century with a surge in research interest over the past 25 years. Moreover, the past 5 years have been particularly fruitful in deciphering its neurobiological underpinnings. This article presents the development of the concept of insight in psychosis and reviews the current neurobiological research findings in this area. PMID:27335512

  9. Insight and analysis problem solving in microbes to machines.

    PubMed

    Clark, Kevin B

    2015-11-01

    A key feature for obtaining solutions to difficult problems, insight is oftentimes vaguely regarded as a special discontinuous intellectual process and/or a cognitive restructuring of problem representation or goal approach. However, this nearly century-old state of art devised by the Gestalt tradition to explain the non-analytical or non-trial-and-error, goal-seeking aptitude of primate mentality tends to neglect problem-solving capabilities of lower animal phyla, Kingdoms other than Animalia, and advancing smart computational technologies built from biological, artificial, and composite media. Attempting to provide an inclusive, precise definition of insight, two major criteria of insight, discontinuous processing and problem restructuring, are here reframed using terminology and statistical mechanical properties of computational complexity classes. Discontinuous processing becomes abrupt state transitions in algorithmic/heuristic outcomes or in types of algorithms/heuristics executed by agents using classical and/or quantum computational models. And problem restructuring becomes combinatorial reorganization of resources, problem-type substitution, and/or exchange of computational models. With insight bounded by computational complexity, humans, ciliated protozoa, and complex technological networks, for example, show insight when restructuring time requirements, combinatorial complexity, and problem type to solve polynomial and nondeterministic polynomial decision problems. Similar effects are expected from other problem types, supporting the idea that insight might be an epiphenomenon of analytical problem solving and consequently a larger information processing framework. Thus, this computational complexity definition of insight improves the power, external and internal validity, and reliability of operational parameters with which to classify, investigate, and produce the phenomenon for computational agents ranging from microbes to man-made devices. PMID

  10. Insight and analysis problem solving in microbes to machines.

    PubMed

    Clark, Kevin B

    2015-11-01

    A key feature for obtaining solutions to difficult problems, insight is oftentimes vaguely regarded as a special discontinuous intellectual process and/or a cognitive restructuring of problem representation or goal approach. However, this nearly century-old state of art devised by the Gestalt tradition to explain the non-analytical or non-trial-and-error, goal-seeking aptitude of primate mentality tends to neglect problem-solving capabilities of lower animal phyla, Kingdoms other than Animalia, and advancing smart computational technologies built from biological, artificial, and composite media. Attempting to provide an inclusive, precise definition of insight, two major criteria of insight, discontinuous processing and problem restructuring, are here reframed using terminology and statistical mechanical properties of computational complexity classes. Discontinuous processing becomes abrupt state transitions in algorithmic/heuristic outcomes or in types of algorithms/heuristics executed by agents using classical and/or quantum computational models. And problem restructuring becomes combinatorial reorganization of resources, problem-type substitution, and/or exchange of computational models. With insight bounded by computational complexity, humans, ciliated protozoa, and complex technological networks, for example, show insight when restructuring time requirements, combinatorial complexity, and problem type to solve polynomial and nondeterministic polynomial decision problems. Similar effects are expected from other problem types, supporting the idea that insight might be an epiphenomenon of analytical problem solving and consequently a larger information processing framework. Thus, this computational complexity definition of insight improves the power, external and internal validity, and reliability of operational parameters with which to classify, investigate, and produce the phenomenon for computational agents ranging from microbes to man-made devices.

  11. Transition Handbook: Valley Transitional School Program.

    ERIC Educational Resources Information Center

    Virginia State Dept. of Rehabilitation Services, Richmond.

    The handbook was developed by the 3-year Valley Transitional School Project, serving Augusta, Staunton, and Waynesboro schools, all located in Augusta County, Virginia. The purpose of the project was to develop and validate a model which would assist school youth with severe disabilities to make the transition from school to employment, in the…

  12. Understanding intercultural transitions of medical students

    PubMed Central

    Mansour, Nasser; Fisher, Ros

    2015-01-01

    Objectives The aim of this research was to explore the transition of medical students to an international branch campus of a medical university established in Bahrain. Methods In order to gain insights into this transition, we explored two culturally diverse systems of learning of the university and the local schools in Bahrain, using Communities of Practice as a lens for understanding transitions. Focus groups were conducted with secondary school teachers and first year medical students. Additionally, semi-structured interviews were conducted with university lecturers.   Results The findings suggest that, while Communities of Practice have been influential in contextualising transitions to university, this model does not seem to help us to fully understand intercultural transitions to the case-study university. Conclusions The research emphasises that more attention should be given to learner individual agency within this theory as a framework for understanding transitions. It also challenges approaches within medical education that attempt to standardise systems of learning through acquisition of established practices. PMID:25725207

  13. Phase Transitions in Thin Block Copolymer Films

    SciTech Connect

    Kramer, Edward J.

    2010-10-08

    David Turnbull's experiments and theoretical insights paved the way for much of our modern understanding of phase transitions in materials. In recognition of his contributions, this lecture will concentrate on phase transitions in a material system not considered by Turnbull, thin diblock copolymer films. Well-ordered block copolymer films are attracting increasing interest as we attempt to extend photolithography to smaller dimensions. In the case of diblock copolymer spheres, an ordered monolayer is hexagonal, but the ordered bulk is body-centered cubic (bcc). There is no hexagonal plane in the bcc structure, so a phase transition must occur as n, the number of layers of spheres in the film, increases. How this phase transition occurs with n and how it can be manipulated is the subject of the first part of my presentation. In the second part of the talk, I show that monolayers of diblock copolymer spheres and cylinders undergo order-to-disorder transitions that differ greatly from those of the bulk. These ordered 2D monolayers are susceptible to phonon-generated disorder as well as to thermal generation of defects, such as dislocations, which, while they are line defects in 3D, are point defects in 2D. The results are compared to the theories of melting of 2D crystals (spheres) and of 2D smectic liquid crystals (cylinders), a comparison that will allow us to understand most, but not all, of the features of these order-disorder transitions that occur as the temperature is increased.

  14. Gas turbine combustor transition

    DOEpatents

    Coslow, B.J.; Whidden, G.L.

    1999-05-25

    A method is described for converting a steam cooled transition to an air cooled transition in a gas turbine having a compressor in fluid communication with a combustor, a turbine section in fluid communication with the combustor, the transition disposed in a combustor shell and having a cooling circuit connecting a steam outlet and a steam inlet and wherein hot gas flows from the combustor through the transition and to the turbine section, includes forming an air outlet in the transition in fluid communication with the cooling circuit and providing for an air inlet in the transition in fluid communication with the cooling circuit. 7 figs.

  15. Gas turbine combustor transition

    DOEpatents

    Coslow, Billy Joe; Whidden, Graydon Lane

    1999-01-01

    A method of converting a steam cooled transition to an air cooled transition in a gas turbine having a compressor in fluid communication with a combustor, a turbine section in fluid communication with the combustor, the transition disposed in a combustor shell and having a cooling circuit connecting a steam outlet and a steam inlet and wherein hot gas flows from the combustor through the transition and to the turbine section, includes forming an air outlet in the transition in fluid communication with the cooling circuit and providing for an air inlet in the transition in fluid communication with the cooling circuit.

  16. Giving Voice to Student and Alumnae Opposition during the Transition to Coeducation by a College for Women

    ERIC Educational Resources Information Center

    Clarke, Rebecca Jean Grandstaff

    2011-01-01

    This dissertation provides insight into students' and alumnae's experiences during the transition and legal proceedings as their former college for women transitioned to coeducation. Previous research on the transition of single-sex colleges to coeducation has primarily examined the process from an organizational perspective. This study focuses on…

  17. Conceptualizing Transitions to Adulthood

    ERIC Educational Resources Information Center

    Wyn, Johanna

    2014-01-01

    This chapter provides an overview of theories of the transition to young adulthood. It sets out the argument for conceptual renewal and discusses some implications of new patterns of transition for adult education.

  18. The Managerial Transition.

    ERIC Educational Resources Information Center

    Kneeland, Steven J.

    1980-01-01

    Having identified the problem of managerial transition in a previous article (CE 510 277), the author outlines a strategy for change which includes performance appraisal, definition of the management structure, and counselling for the individual in transition. (SK)

  19. Transition in Turbines

    NASA Technical Reports Server (NTRS)

    1985-01-01

    The concept of a large disturbance bypass mechanism for the initiation of transition is reviewed and studied. This mechanism, or some manifestation thereof, is suspected to be at work in the boundary layers present in a turbine flow passage. Discussion is presented on four relevant subtopics: (1) the effect of upstream disturbances and wakes on transition; (2) transition prediction models, code development, and verification; (3) transition and turbulence measurement techniques; and (4) the hydrodynamic condition of low Reynolds number boundary layers.

  20. Cosmological phase transitions

    SciTech Connect

    Kolb, E.W. |

    1993-10-01

    If modern ideas about the role of spontaneous symmetry breaking in fundamental physics are correct, then the Universe should have undergone a series of phase transitions early in its history. The study of cosmological phase transitions has become an important aspect of early-Universe cosmology. In this lecture I review some very recent work on three aspects of phase transitions: the electroweak transition, texture, and axions.

  1. Origins of evolutionary transitions.

    PubMed

    Clarke, Ellen

    2014-04-01

    An 'evolutionary transition in individuality' or 'major transition' is a transformation in the hierarchical level at which natural selection operates on a population. In this article I give an abstract (i.e. level-neutral and substrate-neutral) articulation of the transition process in order to precisely understand how such processes can happen, especially how they can get started. PMID:24736161

  2. Transitivity of Preferences

    ERIC Educational Resources Information Center

    Regenwetter, Michel; Dana, Jason; Davis-Stober, Clintin P.

    2011-01-01

    Transitivity of preferences is a fundamental principle shared by most major contemporary rational, prescriptive, and descriptive models of decision making. To have transitive preferences, a person, group, or society that prefers choice option "x" to "y" and "y" to "z" must prefer "x" to "z". Any claim of empirical violations of transitivity by…

  3. Understanding Insight in the Context of Q

    ERIC Educational Resources Information Center

    Coghlan, David

    2012-01-01

    In Revans' learning formula, L = P + Q, Q represents "questioning insight", by which Revans means that insight comes out of the process of questioning programmed knowledge (P) in the light of experience. We typically focus on the content of an insight rather than on the act of insight. Drawing primarily on the work of Bernard Lonergan this paper…

  4. Shedding light on insight: Priming bright ideas

    PubMed Central

    Slepian, Michael L.; Weisbuch, Max; Rutchick, Abraham M.; Newman, Leonard S.; Ambady, Nalini

    2010-01-01

    Previous research has characterized insight as the product of internal processes, and has thus investigated the cognitive and motivational processes that immediately precede it. In this research, however, we investigate whether insight can be catalyzed by a cultural artifact, an external object imbued with learned meaning. Specifically, we exposed participants to an illuminating lightbulb – an iconic image of insight – prior to or during insight problem-solving. Across four studies, exposing participants to an illuminating lightbulb primed concepts associated with achieving an insight, and enhanced insight problem-solving in three different domains (spatial, verbal, and mathematical), but did not enhance general (non-insight) problem-solving. PMID:20652087

  5. Graduating into Start-up: Exploring the Transition

    ERIC Educational Resources Information Center

    Nabi, Ghulam; Holden, Rick; Walmsley, Andreas

    2009-01-01

    The main purpose of the exploratory research discussed in this paper was to generate insights into the complexity of the career-making processes involved in the transition from being a student to starting up a business. Using story-telling interviews, data were collected from fifteen graduates based in the Yorkshire region of the UK. Qualitative…

  6. The role of very weak gamma-ray transitions

    NASA Astrophysics Data System (ADS)

    Kulp, W. David

    2007-04-01

    The success of a nuclear model is generally judged with respect to how well the model reproduces the experimental excitation spectrum and the transition strengths of the strongest γ-ray transitions. When many models apparently describe the same nucleus, measuring the weakest transitions very well can provide insight into which models are preferred and can lead to new physics when a simple model appears to break down. Gamma rays at the limits of detection are presented and the implications of these measurements for nuclear models are discussed.

  7. Phase Transition to Bundles of Flexible Supramolecular Polymers

    NASA Astrophysics Data System (ADS)

    Huisman, B. A. H.; Bolhuis, P. G.; Fasolino, A.

    2008-05-01

    We report Monte Carlo simulations of the self-assembly of supramolecular polymers based on a model of patchy particles. We find a first-order phase transition, characterized by hysteresis and nucleation, toward a solid bundle of polymers, of length much greater than the average gas phase length. We argue that the bundling transition is the supramolecular equivalent of the sublimation transition, which results from a weak chain-chain interaction. We provide a qualitative equation of state that gives physical insight beyond the specific values of the parameters used in our simulations.

  8. The Transition of Prothrombin to Thrombin

    PubMed Central

    Krishnaswamy, Sriram

    2013-01-01

    Summary The proteolytic conversion of prothrombin to thrombin catalysed by prothrombinase is one of the more extensively studied reactions of blood coagulation. Sophisticated biophysical and biochemical insights into the players of this reaction were developed in the early days of the field. Yet, many basic enzymological questions remained unanswered. I summarise new developments that uncover mechanisms by which high substrate specificity is achieved, and the impact of these strategies on enzymic function. Two principles emerge that deviate from conventional wisdom that has otherwise dominated thinking in the field. 1) Enzymic specificity is dominated by the contribution of exosite binding interactions between substrate and enzyme rather than by specific recognition of sequences flanking the scissile bond. Coupled with the regulation of substrate conformation as a result of the zymogen to proteinase transition, novel mechanistic insights result for numerous aspects of enzyme function. 2) The transition of zymogen to proteinase following cleavage is not absolute and instead, thrombin can reversibly interconvert between zymogen-like and proteinase-like forms depending on the complement of ligands bound to it. This establishes new paradigms for considering proteinase allostery and how enzyme function may be modulated by ligand binding. These insights into the action of prothrombinase on prothrombin have wide-ranging implications for the understanding of function in blood coagulation. PMID:23809130

  9. Modeling the transition region

    NASA Technical Reports Server (NTRS)

    Singer, Bart A.

    1993-01-01

    The current status of transition-region models is reviewed in this report. To understand modeling problems, various flow features that influence the transition process are discussed first. Then an overview of the different approaches to transition-region modeling is given. This is followed by a detailed discussion of turbulence models and the specific modifications that are needed to predict flows undergoing laminar-turbulent transition. Methods for determining the usefulness of the models are presented, and an outlook for the future of transition-region modeling is suggested.

  10. Gifts from Exoplanetary Transits

    NASA Astrophysics Data System (ADS)

    Narita, Norio

    2009-08-01

    The discovery of transiting extrasolar planets has enabled us to do a number of interesting studies. Transit photometry reveals the radius and the orbital inclination of transiting planets, which allows us to learn the true mass and density of the respective planets by the combined information from radial velocity (RV) measurements. In addition, follow-up observations of transiting planets, looking at such things as secondary eclipses, transit timing variations, transmission spectroscopy, and the Rossiter-McLaughlin effect, provide us information about their dayside temperatures, unseen bodies in systems, planetary atmospheres, and the obliquity of planetary orbits. Such observational information, which will provide us a greater understanding of extrasolar planets, is available only for transiting planets. Here, I briefly summarize what we can learn from transiting planets and introduce previous studies.

  11. Reconstructive Transitions from Rotations of Rigid Heteroanionic Polyhedra.

    PubMed

    Holland, Michael; Charles, Nenian; Rondinelli, James M; Poeppelmeier, Kenneth R

    2016-09-14

    Phase transitions are ubiquitous in structurally complex transition metal compounds composed of homoanionic polyhedra, including nitrides, oxides, and fluorides. The symmetry breaking that occurs across polymorphic transitions is often achieved by small atomic displacements, rendering these displacive transitions reversible. In contrast, elemental crystals, alloys, and simple minerals will exhibit reconstructive "bond-breaking" transitions. Here we show that a reconstructive transition occurs in the heteroanionic compound KNaNbOF5, owing to reorientations of the [NbOF5](2-) units that trigger a reconfiguration of the cation lattice. Using a combination of synchrotron-based measurements, empirical dynamic simulations, and ab initio calculations, we report structure changes across the transition and formulate an atomistic minimum energy transition path to explain its irreversible nature. Our results indicate that multianionic compounds are likely to host reconstructive transitions that are frequently difficult to study and functionalize in simpler compounds. We anticipate that our insight into the forces that drive the transition will also lead to novel methods to control the assembly of structures in the solid state. PMID:27532822

  12. New Insights about Letter Learning

    ERIC Educational Resources Information Center

    Dougherty Stahl, Katherine A.

    2015-01-01

    The acquisition of alphabetic knowledge (letter names, letter sounds, and letter forms) is an important predictor of later literacy achievement. This article describes research findings that provide new insights about how children learn the alphabetic principle and the implications for effective and efficient instruction of the alphabet. Teachers…

  13. Disabled Readers: Insight, Assessment, Instruction.

    ERIC Educational Resources Information Center

    Sawyer, Diane J., Ed.

    Focusing on helping teachers to understand and help children who have reading disabilities, the 13 papers in this volume were prepared by practitioners at various levels from public school, community, and university settings. The papers included in part one offer insights into the concomitant aspects of reading difficulties. Specific topics…

  14. Investigating Insight as Sudden Learning

    ERIC Educational Resources Information Center

    Ash, Ivan K.; Jee, Benjamin D.; Wiley, Jennifer

    2012-01-01

    Gestalt psychologists proposed two distinct learning mechanisms. Associative learning occurs gradually through the repeated co-occurrence of external stimuli or memories. Insight learning occurs suddenly when people discover new relationships within their prior knowledge as a result of reasoning or problem solving processes that re-organize or…

  15. Psychology of Sport. Issues & Insights.

    ERIC Educational Resources Information Center

    Fisher, A. Craig, Ed.

    This book is designed to provide instructors and students in sport psychology courses with a learning instrument that combines the continuity of a textbook with the range of opinion, in-depth treatment of selected issues, and insight into research methods of a book of readings. The subject is divided into four topical categories. Under the heading…

  16. "I Take Engineering with Me": Epistemological Transitions across an Engineering Curriculum

    ERIC Educational Resources Information Center

    Winberg, Christine; Winberg, Simon; Jacobs, Cecilia; Garraway, James; Engel-Hills, Penelope

    2016-01-01

    In this paper we study epistemological transitions across an intended engineering curriculum and recommend strategies to assist students in attaining the increasingly complex concepts and insights that are necessary for transition to advanced levels of study. We draw on Legitimation Code Theory [Maton, Karl. 2014, "Knowledge and Knowers:…

  17. Dynamic statistical models of biological cognition: insights from communications theory

    NASA Astrophysics Data System (ADS)

    Wallace, Rodrick

    2014-10-01

    Maturana's cognitive perspective on the living state, Dretske's insight on how information theory constrains cognition, the Atlan/Cohen cognitive paradigm, and models of intelligence without representation, permit construction of a spectrum of dynamic necessary conditions statistical models of signal transduction, regulation, and metabolism at and across the many scales and levels of organisation of an organism and its context. Nonequilibrium critical phenomena analogous to physical phase transitions, driven by crosstalk, will be ubiquitous, representing not only signal switching, but the recruitment of underlying cognitive modules into tunable dynamic coalitions that address changing patterns of need and opportunity at all scales and levels of organisation. The models proposed here, while certainly providing much conceptual insight, should be most useful in the analysis of empirical data, much as are fitted regression equations.

  18. Solid–solid phase transitions via melting in metals

    PubMed Central

    Pogatscher, S.; Leutenegger, D.; Schawe, J. E. K.; Uggowitzer, P. J.; Löffler, J. F.

    2016-01-01

    Observing solid–solid phase transitions in-situ with sufficient temporal and spatial resolution is a great challenge, and is often only possible via computer simulations or in model systems. Recently, a study of polymeric colloidal particles, where the particles mimic atoms, revealed an intermediate liquid state in the transition from one solid to another. While not yet observed there, this finding suggests that such phenomena may also occur in metals and alloys. Here we present experimental evidence for a solid–solid transition via the formation of a metastable liquid in a ‘real' atomic system. We observe this transition in a bulk glass-forming metallic system in-situ using fast differential scanning calorimetry. We investigate the corresponding transformation kinetics and discuss the underlying thermodynamics. The mechanism is likely to be a feature of many metallic glasses and metals in general, and may provide further insight into phase transition theory. PMID:27103085

  19. Solid-solid phase transitions via melting in metals.

    PubMed

    Pogatscher, S; Leutenegger, D; Schawe, J E K; Uggowitzer, P J; Löffler, J F

    2016-04-22

    Observing solid-solid phase transitions in-situ with sufficient temporal and spatial resolution is a great challenge, and is often only possible via computer simulations or in model systems. Recently, a study of polymeric colloidal particles, where the particles mimic atoms, revealed an intermediate liquid state in the transition from one solid to another. While not yet observed there, this finding suggests that such phenomena may also occur in metals and alloys. Here we present experimental evidence for a solid-solid transition via the formation of a metastable liquid in a 'real' atomic system. We observe this transition in a bulk glass-forming metallic system in-situ using fast differential scanning calorimetry. We investigate the corresponding transformation kinetics and discuss the underlying thermodynamics. The mechanism is likely to be a feature of many metallic glasses and metals in general, and may provide further insight into phase transition theory.

  20. Solid-solid phase transitions via melting in metals

    NASA Astrophysics Data System (ADS)

    Pogatscher, S.; Leutenegger, D.; Schawe, J. E. K.; Uggowitzer, P. J.; Löffler, J. F.

    2016-04-01

    Observing solid-solid phase transitions in-situ with sufficient temporal and spatial resolution is a great challenge, and is often only possible via computer simulations or in model systems. Recently, a study of polymeric colloidal particles, where the particles mimic atoms, revealed an intermediate liquid state in the transition from one solid to another. While not yet observed there, this finding suggests that such phenomena may also occur in metals and alloys. Here we present experimental evidence for a solid-solid transition via the formation of a metastable liquid in a `real' atomic system. We observe this transition in a bulk glass-forming metallic system in-situ using fast differential scanning calorimetry. We investigate the corresponding transformation kinetics and discuss the underlying thermodynamics. The mechanism is likely to be a feature of many metallic glasses and metals in general, and may provide further insight into phase transition theory.

  1. Gravitationally induced quantum transitions

    NASA Astrophysics Data System (ADS)

    Landry, A.; Paranjape, M. B.

    2016-06-01

    In this paper, we calculate the probability for resonantly inducing transitions in quantum states due to time-dependent gravitational perturbations. Contrary to common wisdom, the probability of inducing transitions is not infinitesimally small. We consider a system of ultracold neutrons, which are organized according to the energy levels of the Schrödinger equation in the presence of the Earth's gravitational field. Transitions between energy levels are induced by an oscillating driving force of frequency ω . The driving force is created by oscillating a macroscopic mass in the neighborhood of the system of neutrons. The neutron lifetime is approximately 880 sec while the probability of transitions increases as t2. Hence, the optimal strategy is to drive the system for two lifetimes. The transition amplitude then is of the order of 1.06 ×10-5, and hence with a million ultracold neutrons, one should be able to observe transitions.

  2. Insights into Parochial School Leadership from a New Generation of Leaders

    ERIC Educational Resources Information Center

    Benscoter, Andy

    2015-01-01

    The purpose of this qualitative study was to gather insights from current parochial school administrators who experience the day-to-day operations and expectations of the position. The role of the parochial principal has transitioned over the past decades to be a position requiring a variety of skills and abilities. Data collection occurred…

  3. Moons over Jupiter: transits and shadow transits

    NASA Astrophysics Data System (ADS)

    Rogers, J. H.; et al.

    2003-06-01

    There is no more beautiful illustration of orbital motions than the movements of Jupiter's satellites. Every six years, their movements are most strikingly displayed, when the jovian system is presented edge-on to Earth. This means that there is a higher frequency of multiple transits over the face of the planet, as all the moons transit across the equatorial zone, whereas in other years Ganymede and Callisto transit near the poles or not at all. Also, for a few months, the satellites pass in front of each other, displaying mutual eclipses and occultations. In 2002/2003 we have been able to observe a fine series of these multiple and mutual events. On the cover, and on these pages, are some of the highest-resolution images received.

  4. Polyolefin Miscibility: Novel Insights from Molecular Inspection

    NASA Astrophysics Data System (ADS)

    Wolak, Justyna E.; White, Jeffery L.

    2004-03-01

    We present experimental evidence for increased local entropy in a high-molecular weight polymer upon blend formation with a second, higher Tg polymer. Direct spectroscopic observation of conformational dynamics at or slightly above Tg by 2D solid-state NMR reveals an increase in the absolute configurational entropy of polyisobutylene when a miscible blend with polyethylene-co-butene is formed while no increase is observed for phase-separated blends. Static ^2H and ^129Xe NMR experiments support this conclusion. These results contradict traditional thermodynamic models where entropy of mixing for two macromolecules is assumed to be zero. Such models are inherently based on non-local polymer structures, and fail to account for specific dynamics at sub-Rg length scales. Our experimental results on saturated hydrocarbon blends, in which enthalpic interactions are small due to the identical chemical composition of polyolefins, indicate cumulative conformational entropy gains upon mixing. In a second manifestation of these new experimental insights, Adams-Gibbs theory is used to determine changes in the configurational entropy across the glass-transition temperature range.

  5. Dynamical Transition in polypeptides

    NASA Astrophysics Data System (ADS)

    He, Yunfen; Markelz, Andrea

    2008-03-01

    Two of the possible causes for the so called dynamical transition (the rapid increase in flexibility for biomolecules at ˜ 200 K) are: thermally activated side chain diffusive motions with hydration dependent activation energies; or a glass transition in the biological water directly adjacent to the biomolecule. If the transition is strictly due to side chain activation, it should not depend on protein structure. Previously we demonstrated that the dynamical transition remains after tertiary structure was removed using THz time domain dielectric spectroscopy (0.2 -2.0 THz, 0.5-5ps). Here measurements on polyalanine as a function of chain length show that the dynamical transition does not occur for peptide length shorter than 5. However, the transition is observed for 5 mer and higher. Structural and simulation studies indicate that the 5 mer transiently occupies structured forms [1,2]. These results suggest that A) the dynamical transition is not due to thermally activated side chain motion and B) secondary structure is necessary for the dynamical transition. Secondary structure possibly induces sufficient ordering in the adjacent water to result in a fragile to strong glass transition resulting in increased protein flexibility [3]. [1] KAH Wildman et al. Solid State Nucl. Magn. Reson. 24 (2003) 94-109. [2] Yuguang Mu,et al. Proteins 58, (2005) 45-52. [3] S.H. Chen et al. PNAS (2006) 9012--9016.

  6. Insights.

    ERIC Educational Resources Information Center

    Journal of Chemical Education, 1985

    1985-01-01

    Presents a method for solving problems related to gas laws, the mole concept, molarity, heats of reactions, and other chemical concepts. Also presents another method which was devised to simplify the teaching of stoichiometric calculations using conversion factors. (JN)

  7. Insights.

    ERIC Educational Resources Information Center

    Bogner, Donna, Ed.

    1988-01-01

    Describes two methods to teach radioactive decay to secondary students with wide ranging abilities. Activities are designed to follow classroom discussions of atomic structure, transmutation, half life, and nuclear decay. Includes "The Tasmanian Empire: A Radioactive Dating Activity" and an exercise to teach concepts of half life without using…

  8. Insights.

    ERIC Educational Resources Information Center

    Bogner, Donna, Ed.

    1990-01-01

    Presented is an approach to solving oxidation-reduction reactions. The advantage of this procedure for both acidic and basic equations is stressed and emphasizes the electrical nature of redox equations. (KR)

  9. Reentry Programming for High-Risk Offenders: Insights From Participants.

    PubMed

    Bender, Kimberly A; Cobbina, Jennifer E; McGarrell, Edmund F

    2016-10-01

    The mass increase in imprisonment of the last two decades has led to an increasing number of adults released from prison. Scholarly accounts of prisoner reentry have demonstrated that incarcerated individuals face barriers on release from prison and that intervention programs are necessary to assist their transition to the community. Here, we build from the insights of previous research by examining how high-risk offenders perceive a reentry program. Using a qualitative approach, our findings suggest that procedural and substantive justice affect their satisfaction and involvement with the program. This study highlights the importance of providing employment opportunities, social support, and fair and respectful delivery of services to assist incarcerated individuals transitioning to the community.

  10. Electrothermal design aspects of transitioning solid armatures

    NASA Astrophysics Data System (ADS)

    Schoolderman, A. J.; de Zeeuw, W. A.; Koops, M.

    1993-01-01

    To optimize erosion-free rail accelerator launch of solid brush armatures, a 2D model and an analytical model are used to study the temperature distribution, the coefficient of friction and the transitioning behavior of U-shaped solid armatures made of Cu, Al, Mo, and Ti during electromagnetic launch. In order to experimentally verify the insights gained from these theoretical studies, recently developed diagnostics are applied. The growth potential of solid armatures for weapons applications is highlighted by considering such materials as Ti and Mo.

  11. An Observational Perspective of Transitional Disks

    NASA Astrophysics Data System (ADS)

    Espaillat, C.; Muzerolle, J.; Najita, J.; Andrews, S.; Zhu, Z.; Calvet, N.; Kraus, S.; Hashimoto, J.; Kraus, A.; D'Alessio, P.

    Transitional disks are objects whose inner disk regions have undergone substantial clearing. The Spitzer Space Telescope produced detailed spectral energy distributions (SEDs) of transitional disks that allowed us to infer their radial dust disk structure in some detail, revealing the diversity of this class of disks. The growing sample of transitional disks also opened up the possibility of demographic studies, which provided unique insights. There now exist (sub)millimeter and infrared images that confirm the presence of large clearings of dust in transitional disks. In addition, protoplanet candidates have been detected within some of these clearings. Transitional disks are thought to be a strong link to planet formation around young stars and are a key area to study if further progress is to be made on understanding the initial stages of planet formation. Here we provide a review and synthesis of transitional disk observations to date with the aim of providing timely direction to the field, which is about to undergo its next burst of growth as the Atacama Large Millimeter/submillimeter Array (ALMA) reaches its full potential. We discuss what we have learned about transitional disks from SEDs, color-color diagrams, and imaging in the (sub)millimeter and infrared. We note the limitations of these techniques, particularly with respect to the sizes of the clearings currently detectable, and highlight the need for pairing broadband SEDs with multi-wavelength images to paint a more detailed picture of transitional disk structure. We review the gas in transitional disks, keeping in mind that future observations with ALMA will give us unprecedented access to gas in disks, and also observed infrared variability pointing to variable transitional disk structure, which may have implications for disks in general. We then distill the observations into constraints for the main disk-clearing mechanisms proposed to date (i.e., photoevaporation, grain growth, and companions) and

  12. Scaling ansatz for the jamming transition.

    PubMed

    Goodrich, Carl P; Liu, Andrea J; Sethna, James P

    2016-08-30

    We propose a Widom-like scaling ansatz for the critical jamming transition. Our ansatz for the elastic energy shows that the scaling of the energy, compressive strain, shear strain, system size, pressure, shear stress, bulk modulus, and shear modulus are all related to each other via scaling relations, with only three independent scaling exponents. We extract the values of these exponents from already known numerical or theoretical results, and we numerically verify the resulting predictions of the scaling theory for the energy and residual shear stress. We also derive a scaling relation between pressure and residual shear stress that yields insight into why the shear and bulk moduli scale differently. Our theory shows that the jamming transition exhibits an emergent scale invariance, setting the stage for the potential development of a renormalization group theory for jamming. PMID:27512041

  13. Scaling ansatz for the jamming transition

    NASA Astrophysics Data System (ADS)

    Goodrich, Carl P.; Liu, Andrea J.; Sethna, James P.

    2016-08-01

    We propose a Widom-like scaling ansatz for the critical jamming transition. Our ansatz for the elastic energy shows that the scaling of the energy, compressive strain, shear strain, system size, pressure, shear stress, bulk modulus, and shear modulus are all related to each other via scaling relations, with only three independent scaling exponents. We extract the values of these exponents from already known numerical or theoretical results, and we numerically verify the resulting predictions of the scaling theory for the energy and residual shear stress. We also derive a scaling relation between pressure and residual shear stress that yields insight into why the shear and bulk moduli scale differently. Our theory shows that the jamming transition exhibits an emergent scale invariance, setting the stage for the potential development of a renormalization group theory for jamming.

  14. Scaling ansatz for the jamming transition

    PubMed Central

    Goodrich, Carl P.; Liu, Andrea J.; Sethna, James P.

    2016-01-01

    We propose a Widom-like scaling ansatz for the critical jamming transition. Our ansatz for the elastic energy shows that the scaling of the energy, compressive strain, shear strain, system size, pressure, shear stress, bulk modulus, and shear modulus are all related to each other via scaling relations, with only three independent scaling exponents. We extract the values of these exponents from already known numerical or theoretical results, and we numerically verify the resulting predictions of the scaling theory for the energy and residual shear stress. We also derive a scaling relation between pressure and residual shear stress that yields insight into why the shear and bulk moduli scale differently. Our theory shows that the jamming transition exhibits an emergent scale invariance, setting the stage for the potential development of a renormalization group theory for jamming. PMID:27512041

  15. Transitions: The Evolution of Linguistic Replicators

    NASA Astrophysics Data System (ADS)

    Kirby, Simon

    Maynard Smith and Szathmáry (1995) propose a series of major transitions in the evolutionary history of life. Their work provides a rich framework for thinking about replication. They identified the importance of language in this light, but language is a new system of replication in more than one sense: it is both an enabler of cultural replicators with unlimited heredity, and also a new kind of evolutionary system itself. Iterated learning is the process of linguistic transmission, and it drives both language change and the transitions to qualitatively new kinds of linguistic system. By seeing language as an evolutionary system, the biggest payoff we get may be the ability to take biologists' insights into the evolution of life and apply them to the evolution of language.

  16. Elasticity and Inverse Temperature Transition in Elastin

    DOE PAGES

    Perticaroli, Stefania; Ehlers, Georg; Jalarvo, Niina; Katsaras, John; Nickels, Jonathan D.

    2015-09-22

    Structurally, elastin is protein and biomaterial that provides elasticity and resilience to a range of tissues. This work provides insights into the elastic properties of elastin and its peculiar inverse temperature transition (ITT). These features are dependent on hydration of elastin and are driven by a similar mechanism of hydrophobic collapse to an entropically favorable state. Moreover, when using neutron scattering, we quantify the changes in the geometry of molecular motions above and below the transition temperature, showing a reduction in the displacement of water-induced motions upon hydrophobic collapse at the ITT. Finally, we measured the collective vibrations of elastinmore » gels as a function of elongation, revealing no changes in the spectral features associated with local rigidity and secondary structure, in agreement with the entropic origin of elasticity.« less

  17. Elasticity and Inverse Temperature Transition in Elastin

    SciTech Connect

    Perticaroli, Stefania; Ehlers, Georg; Jalarvo, Niina; Katsaras, John; Nickels, Jonathan D.

    2015-09-22

    Structurally, elastin is protein and biomaterial that provides elasticity and resilience to a range of tissues. This work provides insights into the elastic properties of elastin and its peculiar inverse temperature transition (ITT). These features are dependent on hydration of elastin and are driven by a similar mechanism of hydrophobic collapse to an entropically favorable state. Moreover, when using neutron scattering, we quantify the changes in the geometry of molecular motions above and below the transition temperature, showing a reduction in the displacement of water-induced motions upon hydrophobic collapse at the ITT. Finally, we measured the collective vibrations of elastin gels as a function of elongation, revealing no changes in the spectral features associated with local rigidity and secondary structure, in agreement with the entropic origin of elasticity.

  18. Transition to Old Age (Transition to Retirement).

    ERIC Educational Resources Information Center

    Bergman, Simon

    Several conceptualizations and definitions of retirement have been proposed. One of them--the three-stage transition process--can be illustrated from studies in Israel: (1) leaving the old role; (2) going through the act of formal separation; and (3) adjusting to the new situation and role. Today's higher rate of survival into later years means…

  19. When teams shift among processes: insights from simulation and optimization.

    PubMed

    Kennedy, Deanna M; McComb, Sara A

    2014-09-01

    This article introduces process shifts to study the temporal interplay among transition and action processes espoused in the recurring phase model proposed by Marks, Mathieu, and Zacarro (2001). Process shifts are those points in time when teams complete a focal process and change to another process. By using team communication patterns to measure process shifts, this research explores (a) when teams shift among different transition processes and initiate action processes and (b) the potential of different interventions, such as communication directives, to manipulate process shift timing and order and, ultimately, team performance. Virtual experiments are employed to compare data from observed laboratory teams not receiving interventions, simulated teams receiving interventions, and optimal simulated teams generated using genetic algorithm procedures. Our results offer insights about the potential for different interventions to affect team performance. Moreover, certain interventions may promote discussions about key issues (e.g., tactical strategies) and facilitate shifting among transition processes in a manner that emulates optimal simulated teams' communication patterns. Thus, we contribute to theory regarding team processes in 2 important ways. First, we present process shifts as a way to explore the timing of when teams shift from transition to action processes. Second, we use virtual experimentation to identify those interventions with the greatest potential to affect performance by changing when teams shift among processes. Additionally, we employ computational methods including neural networks, simulation, and optimization, thereby demonstrating their applicability in conducting team research.

  20. Transitioning between Clerkship Directors

    ERIC Educational Resources Information Center

    Soltys, Stephen M.; Pary, Robert J.; Robinson, Stephen W.; Markwell, Stephen J.

    2011-01-01

    Objective: The authors report on succession-planning for mid-level academic positions. Method: The authors describe the process of succession-planning between clerkship directors and the smooth transition resulting in one case. Results: Gradually transitioning allowed a new faculty person to assume the clerkship-director position with minimal…

  1. Transitions in Spousal Caregiving.

    ERIC Educational Resources Information Center

    Burton, Lynda C.; Zdaniuk, Bozena; Schulz, Richard; Jackson, Sharon; Hirsch, Calvin

    2003-01-01

    Describes transitions over 5 years among community-dwelling elderly spouses into and within caregiving roles and associated health outcomes. The trajectory of health outcomes associated with caregiving was generally downward. Those who transitioned to heavy caregiving had more symptoms of depression, and poorer self-reported health and health…

  2. Seamless Transition for All

    ERIC Educational Resources Information Center

    Test, David W.

    2008-01-01

    Postschool outcomes for students with disabilities have been dismal for quite some time now. Although recent data from the National Longitudinal Transition Study 2 indicate some improvement, students with severe intellectual disabilities continue to transition into segregated employment at unacceptable rates in spite of a multitude of studies,…

  3. Matter in transition

    NASA Astrophysics Data System (ADS)

    Anderson, Lara B.; Gray, James; Raghuram, Nikhil; Taylor, Washington

    2016-04-01

    We explore a novel type of transition in certain 6D and 4D quantum field theories, in which the matter content of the theory changes while the gauge group and other parts of the spectrum remain invariant. Such transitions can occur, for example, for SU(6) and SU(7) gauge groups, where matter fields in a three-index antisymmetric representation and the fundamental representation are exchanged in the transition for matter in the two-index antisymmetric representation. These matter transitions are realized by passing through superconformal theories at the transition point. We explore these transitions in dual F-theory and heterotic descriptions, where a number of novel features arise. For example, in the heterotic description the relevant 6D SU(7) theories are described by bundles on K3 surfaces where the geometry of the K3 is constrained in addition to the bundle structure. On the F-theory side, non-standard representations such as the three-index antisymmetric representation of SU( N) require Weierstrass models that cannot be realized from the standard SU( N) Tate form. We also briefly describe some other situations, with groups such as Sp(3), SO(12), and SU(3), where analogous matter transitions can occur between different representations. For SU(3), in particular, we find a matter transition between adjoint matter and matter in the symmetric representation, giving an explicit Weierstrass model for the F-theory description of the symmetric representation that complements another recent analogous construction.

  4. Good Transitions = Great Starts!

    ERIC Educational Resources Information Center

    Our Children: The National PTA Magazine, 2012

    2012-01-01

    The smooth transition of outgoing and incoming board members and officers is of vital importance and can determine the PTA's success for years to come. The transition process is the responsibility of both incoming and outgoing officers and board members. It gives closure to those leaving their positions and allows those coming in to be properly…

  5. Secondary Education Transition Model.

    ERIC Educational Resources Information Center

    Colorado State Univ., Ft. Collins.

    The Secondary Education Transition Model project at Colorado State University-Fort Collins represents a local and state commitment to serve students with severe handicaps who are moving into community work and living roles. These comprehensive transition services begin at the secondary education level and extend into the adult service system. The…

  6. Transitions and Linkages.

    ERIC Educational Resources Information Center

    Ilfeld, Ellen M., Ed.; Hanssen, Elizabeth, Ed.

    1997-01-01

    If children are to benefit from a healthy, supportive early childhood experience, it is important to strengthen transitions between early childhood experiences in educational and care settings and the more formal educational system. This issue of Coordinator's Notebook focuses on strengthening linkages and transitions between home, preschool, and…

  7. Quantifying the Qualitative: Measuring the Insight Experience

    ERIC Educational Resources Information Center

    Jarman, Matthew S.

    2014-01-01

    No scales currently exist that measure variability in the insight experience. Two scales were created to measure two factors hypothesized to be key drivers of the insight experience: insight radicality (i.e., perceived deviation between previous and new problem representations) and restructuring experience (i.e., the subjective experience of the…

  8. High flux film and transition boiling

    SciTech Connect

    Witte, L.C.

    1993-02-01

    An investigation was conducted on the potential for altering the boiling curve through effects of high velocity and high subcooling. Experiments using water and Freon-113 flowing over cylindrical electrical heaters in crossflow were made to see how velocity and subcooling affect the boiling curve, especially the film and transition boiling regions. We sought subcooling levels down to near the freezing points of these two liquids to prove the concept that the critical heat flux and the minimum heat flux could be brought together, thereby averting the transition region altogether. Another emphasis was to gain insight into how the various boiling regions could be represented mathematically on various parts of heating surface. Motivation for the research grew out of a realization that the effects of very high subcooling and velocity might be to avert the transition boiling altogether so that the unstable part of the boiling curve would not limit the application of high flux devices to temperatures less than the burnout temperatures. Summaries of results from the study are described. It shows that the potential for averting, the transition region is good, and points the way to further research that is needed to demonstrate the potential.

  9. Interfacial phase transitions in conducting fluids.

    PubMed

    Freyland, Werner

    2008-02-21

    We present a review, largely based on recent experimental work of our group, on phase transitions at interfaces of fluid metals, alloys and ionic liquids. After a brief analysis of possible experimental errors and limitations of surface sensitive methods, we first deal with first-order wetting transitions at the liquid/vapour and liquid/wall interface in systems such as Ga-based alloys, K-KCl melts, and fluid Hg. The following chapter refers to surface freezing or surface induced crystallization in different metal alloys. The respective surface phase diagrams are discussed in comparison with their bulk counterpart. In the last part we present very recent investigations of ionic liquid interfaces, including order-disorder transitions at the liquid/vapour interface and examples of two-dimensional phase transitions at the electrified ionic liquid/metal interface. Finally, a simple electrowetting experiment with an ionic liquid droplet under vacuum is described which gives new insight into the contact angle saturation problem. The article ends up with a few perspective remarks on open problems and potential impact of interfacial phenomena on applied research. PMID:18259631

  10. High flux film and transition boiling

    NASA Astrophysics Data System (ADS)

    Witte, L. C.

    1993-02-01

    An investigation was conducted on the potential for altering the boiling curve through effects of high velocity and high subcooling. Experiments using water and Freon-113 flowing over cylindrical electrical heaters in crossflow were made to see how velocity and subcooling affect the boiling curve, especially the film and transition boiling regions. We sought subcooling levels down to near the freezing points of these two liquids to prove the concept that the critical heat flux and the minimum heat flux could be brought together, thereby averting the transition region altogether. Another emphasis was to gain insight into how the various boiling regions could be represented mathematically on various parts of the heating surface. Motivation for the research grew out of a realization that the effects of very high subcooling and velocity might be to avert the transition boiling altogether so that the unstable part of the boiling curve would not limit the application of high flux devices to temperatures less than the burnout temperatures. Summaries of results from the study are described. It shows that the potential for averting the transition region is good and points the way to further research that is needed to demonstrate the potential.

  11. Discontinuous jamming transition in driven foam

    NASA Astrophysics Data System (ADS)

    Dennin, Michael

    2007-03-01

    Aqueous foam (gas bubbles with liquid walls) is a surprising substance. Every molecule in foam is in a fluid state, either liquid or gas. Yet, the entire foam holds its shape as a solid would. In fact, when subjected to an applied strain at a slow enough strain rate, the initial response of the foam is the same as an elastic solid. On the other hand, under sufficiently large stress or strain, the foam can flow in a fashion similar to a fluid. This is similar to plastic flow that occurs in many ``molecular'' solids. In this talk, we will focus on experimental studies of the transition from solid behavior to flowing behavior, with an emphasis on to what degree this ``jamming'' transition is analogous to a ``real'' phase transition. We will focus on recent results using a model, two-dimensional foam: bubble rafts. Bubble rafts are a single layer of bubbles on the surface of water. By focusing on a two-dimensional system, it is relatively easy to track individual bubbles and gain insight into the connection between bubble dynamics (the mesoscopic scale) and the response of the entire foam (macroscopic scale). We will focus on recent measurements of a discontinuous transition from solid to fluid like behavior in the bubble raft.

  12. Novel percolation transitions and coupled catastrophes

    NASA Astrophysics Data System (ADS)

    D'Souza, Raissa

    Collections of interdependent networks are at the core of modern society, spanning physical, biological and social systems. Simple mathematical models of the structure and function of networks can provide important insights into real-world systems, enhancing our ability to steer and control them. Here our focus is on abrupt changes in networks, due both to phase transitions and to jumping between bi-stable equilibria. We begin with an overview of novel classes of percolation phase transitions that result from repeated, small interventions intended to delay the transition. These new phenomena allow us to extend percolation approaches to modular networks, Brownian motion, and cluster growth dynamics. We then focus on abrupt transitions due to a system jumping between bi-stable equilibria, modeled as a cusp catastrophe in nonlinear dynamics. We show that when systems that each undergo a cusp catastrophe interact, we can observe a new phenomena of catastrophe-hopping leading to non-local cascading failures. Here an intermediate system facilitates the propagation of a sudden change or collapse, and we show that catastrophe hopping is consistent with the outbreak of protests observed during the Arab Spring of 2011.

  13. Boundary layer transition studies

    NASA Technical Reports Server (NTRS)

    Watmuff, Jonathan H.

    1995-01-01

    A small-scale wind tunnel previously used for turbulent boundary layer experiments was modified for two sets of boundary layer transition studies. The first study concerns a laminar separation/turbulent reattachment. The pressure gradient and unit Reynolds number are the same as the fully turbulent flow of Spalart and Watmuff. Without the trip wire, a laminar layer asymptotes to a Falkner & Skan similarity solution in the FPG. Application of the APG causes the layer to separate and a highly turbulent and approximately 2D mean flow reattachment occurs downstream. In an effort to gain some physical insight into the flow processes a small impulsive disturbance was introduced at the C(sub p) minimum. The facility is totally automated and phase-averaged data are measured on a point-by-point basis using unprecedently large grids. The evolution of the disturbance has been tracked all the way into the reattachment region and beyond into the fully turbulent boundary layer. At first, the amplitude decays exponentially with streamwise distance in the APG region, where the layer remains attached, i.e. the layer is viscously stable. After separation, the rate of decay slows, and a point of minimum amplitude is reached where the contours of the wave packet exhibit dispersive characteristics. From this point, exponential growth of the amplitude of the disturbance is observed in the detached shear layer, i.e. the dominant instability mechanism is inviscid. A group of large-scale 3D vortex loops emerges in the vicinity of the reattachment. Remarkably, the second loop retains its identify far downstream in the turbulent boundary layer. The results provide a level of detail usually associated with CFD. Substantial modifications were made to the facility for the second study concerning disturbances generated by Suction Holes for laminar flow Control (LFC). The test section incorporates suction through interchangeable porous test surfaces. Detailed studies have been made using isolated

  14. The INSIGHT SEIS VBB Experiment

    NASA Astrophysics Data System (ADS)

    Tillier, S.; De Raucourt, S.; Lognonne, P. H.; Banerdt, B.; Mimoun, D.; Giardini, D.; Christensen, U. R.; Pike, W. T.; Zweifel, P.; Mance, D.; Bierwirth, M.; Laudet, P.; Perez, R.; Kerjean, L.; Hurst, K. J.; Mocquet, A.; Garcia, R. F.

    2012-12-01

    The SEIS experiment is the primary payload of the Interior Structure investigation using Seismology and Heat Transport (INSIGHT) Mission Proposal, submitted to NASA in the frame of the 2010 Discovery program, and selected for a competitive phase A study, together with two other projects. The objective of the INSIGHT SEIS experiment is the determination of the deep internal structure of Mars. In particular, geophysical parameters of first importance, such as the state (liquid/solid) and size of the core, structure of the mantle, shape of discontinuities, thickness of the crust will be determined by the experiment. It will measure seismic activity in a very broad band of signal, from the tidal frequencies (0.05 mHz) up to the short period frequencies (50 Hz), to address the widest range of scientific questions, from the state of the core to the meteoritic impact and quake rates. The instrument integrates a Very Broad Band (VBB) 3 axis seismometer, completed by another trihedron of MEMS short period seismometers, environmental sensors for pressure, wind and temperature, The sensors will be deployed on the Martian ground by a robotic arm from a Phoenix-type lander platform and protected by a wind and thermal shield. The sensor assembly, which contains all seismic sensors, the leveling system, as well as house-keeping and temperature measurements, will be deployed on the soil in order to allow the best possible mechanical coupling with the ground motion. The wind and thermal shield, the sensors' specific containers (vacuum sphere for VBBs) and a passive thermal compensation system will achieve a very high protection of the VBB against temperature and pressure variations, allowing the sensor to operate in the rough Martian thermal environment while reaching a deection threshold below 10-9 ms-2 Hz-1/2 in the VBB bandwidth. A dedicated electronics will manage the overall experiment and ultra-low noise, space qualified 24 bits A/D converters will perform the acquisition

  15. Predictability of critical transitions

    NASA Astrophysics Data System (ADS)

    Zhang, Xiaozhu; Kuehn, Christian; Hallerberg, Sarah

    2015-11-01

    Critical transitions in multistable systems have been discussed as models for a variety of phenomena ranging from the extinctions of species to socioeconomic changes and climate transitions between ice ages and warm ages. From bifurcation theory we can expect certain critical transitions to be preceded by a decreased recovery from external perturbations. The consequences of this critical slowing down have been observed as an increase in variance and autocorrelation prior to the transition. However, especially in the presence of noise, it is not clear whether these changes in observation variables are statistically relevant such that they could be used as indicators for critical transitions. In this contribution we investigate the predictability of critical transitions in conceptual models. We study the quadratic integrate-and-fire model and the van der Pol model under the influence of external noise. We focus especially on the statistical analysis of the success of predictions and the overall predictability of the system. The performance of different indicator variables turns out to be dependent on the specific model under study and the conditions of accessing it. Furthermore, we study the influence of the magnitude of transitions on the predictive performance.

  16. QM/MM Analysis of Transition States and Transition State Analogues in Metalloenzymes.

    PubMed

    Roston, D; Cui, Q

    2016-01-01

    Enzymology is approaching an era where many problems can benefit from computational studies. While ample challenges remain in quantitatively predicting behavior for many enzyme systems, the insights that often come from computations are an important asset for the enzymology community. Here we provide a primer for enzymologists on the types of calculations that are most useful for mechanistic problems in enzymology. In particular, we emphasize the integration of models that range from small active-site motifs to fully solvated enzyme systems for cross-validation and dissection of specific contributions from the enzyme environment. We then use a case study of the enzyme alkaline phosphatase to illustrate specific application of the methods. The case study involves examination of the binding modes of putative transition state analogues (tungstate and vanadate) to the enzyme. The computations predict covalent binding of these ions to the enzymatic nucleophile and that they adopt the trigonal bipyramidal geometry of the expected transition state. By comparing these structures with transition states found through free energy simulations, we assess the degree to which the transition state analogues mimic the true transition states. Technical issues worth treating with care as well as several remaining challenges to quantitative analysis of metalloenzymes are also highlighted during the discussion. PMID:27498640

  17. Experimental and theoretical investigations on shock wave induced phase transitions

    NASA Astrophysics Data System (ADS)

    Gupta, Satish C.; Sikka, S. K.

    2001-06-01

    Shock wave loading of a material can cause variety of phase transitions, like polymorphism, amorphization, metallization and molecular dissociations. As the shocked state lasts only for a very short duration (about a few microseconds or less), in-situ microscopic measurements are very difficult. Although such studies are beginning to be possible, most of the shock-induced phase transitions are detected using macroscopic measurements. The microscopic nature of the transition is then inferred from comparison with static pressure data or interpreted by theoretical methods. For irreversible phase transitions, microscopic measurements on recovered samples, together with orientation relations determined from selected area electron diffraction and examination of the morphology of growth of the new phase can provide insight into mechanism of phase transitions. On theoretical side, the current ab initio band structure techniques based on density functional formalism provide capability for accurate computation of the small energy differences (a few mRy or smaller) between different plausible structures. Total energy calculation along the path of a phase transition can furnish estimates of activation barrier, which has implications for understanding kinetics of phase transitions. Molecular dynamics calculations, where the new structure evolves naturally, are becoming increasingly popular especially for understanding crystal to amorphous phase transitions. Illustrations from work at our laboratory will be presented.

  18. Takotsubo Syndrome: Insights from Japan.

    PubMed

    Akashi, Yoshihiro J; Ishihara, Masaharu

    2016-10-01

    We report the history and new insights of takotsubo syndrome based on the achievements that Japanese researchers have contributed and summarize the evidence originally presented from Japan. Takotsubo syndrome is a newly described heart failure characterized by transient left ventricular dysfunction. We should be aware of this entity as a syndrome, not actual cardiomyopathy. Japanese researchers focus on the experimental approaches for clinical diagnosis and treatment of takotsubo syndrome. As representatives from a country originally naming this syndrome takotsubo, a global registry for takotsubo syndrome including Japan should be established.

  19. Takotsubo Syndrome: Insights from Japan.

    PubMed

    Akashi, Yoshihiro J; Ishihara, Masaharu

    2016-10-01

    We report the history and new insights of takotsubo syndrome based on the achievements that Japanese researchers have contributed and summarize the evidence originally presented from Japan. Takotsubo syndrome is a newly described heart failure characterized by transient left ventricular dysfunction. We should be aware of this entity as a syndrome, not actual cardiomyopathy. Japanese researchers focus on the experimental approaches for clinical diagnosis and treatment of takotsubo syndrome. As representatives from a country originally naming this syndrome takotsubo, a global registry for takotsubo syndrome including Japan should be established. PMID:27638028

  20. Approaching the Distinction between Intuition and Insight

    PubMed Central

    Zhang, Zhonglu; Lei, Yi; Li, Hong

    2016-01-01

    Intuition and insight share similar cognitive and neural basis. Though, there are still some essential differences between the two. Here in this short review, we discriminated between intuition, and insight in two aspects. First, intuition, and insight are toward different aspects of information processing. Whereas intuition involves judgment about “yes or no,” insight is related to “what” is the solution. Second, tacit knowledge play different roles in between intuition and insight. On the one hand, tacit knowledge is conducive to intuitive judgment. On the other hand, tacit knowledge may first impede but later facilitate insight occurrence. Furthermore, we share theoretical, and methodological views on how to access the distinction between intuition and insight. PMID:27555833

  1. Approaching the Distinction between Intuition and Insight.

    PubMed

    Zhang, Zhonglu; Lei, Yi; Li, Hong

    2016-01-01

    Intuition and insight share similar cognitive and neural basis. Though, there are still some essential differences between the two. Here in this short review, we discriminated between intuition, and insight in two aspects. First, intuition, and insight are toward different aspects of information processing. Whereas intuition involves judgment about "yes or no," insight is related to "what" is the solution. Second, tacit knowledge play different roles in between intuition and insight. On the one hand, tacit knowledge is conducive to intuitive judgment. On the other hand, tacit knowledge may first impede but later facilitate insight occurrence. Furthermore, we share theoretical, and methodological views on how to access the distinction between intuition and insight. PMID:27555833

  2. A Density-Independent Flocking Transition in Confluent Tissues

    NASA Astrophysics Data System (ADS)

    Czajkowski, Michael; Bi, Dapeng; Manning, M. Lisa; Marchetti, M. Cristina

    Some of us recently demonstrated a density-independent solid-liquid transition in confluent tissues controlled by cell motility and a cell shape parameter measuring the interplay of cortical tension and cell-cell adhesion. An important insight of this work is that the rigidity and dynamics of cell layers depends sensitively on cell shape. To explore the influence of cell shape on collective states, we have constructed continuum equations that couple a scalar field describing cell-shape anisotropy to cell polarization. The model displays a density independent transition to a polarized state of elongated cells driven by a cellular ``shape-index'' parameter. We map out the phase diagram using linear stability analysis and numerical solution of the nonlinear hydrodynamic equations. The proposed transition constitutes a density-independent flocking transition. We acknowledge support from The Simons Foundation and NSF-DGE-1068780.

  3. Theory of mind correlates with clinical insight but not cognitive insight in patients with schizophrenia.

    PubMed

    Zhang, Qi; Li, Xu; Parker, Giverny J; Hong, Xiao-Hong; Wang, Yi; Lui, Simon S Y; Neumann, David L; Cheung, Eric F C; Shum, David H K; Chan, Raymond C K

    2016-03-30

    Research on the relationship between insight and social cognition, in particular Theory of Mind (ToM), in schizophrenia has yielded mixed findings to date. Very few studies, however, have assessed both clinical insight and cognitive insight when examining their relationships with ToM in schizophrenia. The current study thus investigated the relationship between clinical insight, cognitive insight, and ToM in a sample of 56 patients with schizophrenia and 30 healthy controls. Twenty-seven patients were classified as low in clinical insight according to their scores on the 'insight' item (G12) of the Positive and Negative Syndrome Scale (PANSS). Moreover, cognitive insight and ToM were assessed with the Beck Cognitive Insight Scale (BCIS) and the Yoni task, respectively. The results indicated that patients with poor clinical insight performed worse on tasks of second-order cognitive and affective ToM, while the ToM performance of patients with high clinical insight was equivalent to that of healthy controls. Furthermore, while clinical insight was correlated with ToM and clinical symptoms, cognitive insight did not correlate with clinical insight, ToM, or clinical symptoms. Clinical insight thus appears to be an important factor related to ToM in schizophrenia. PMID:26833279

  4. Theory of mind correlates with clinical insight but not cognitive insight in patients with schizophrenia.

    PubMed

    Zhang, Qi; Li, Xu; Parker, Giverny J; Hong, Xiao-Hong; Wang, Yi; Lui, Simon S Y; Neumann, David L; Cheung, Eric F C; Shum, David H K; Chan, Raymond C K

    2016-03-30

    Research on the relationship between insight and social cognition, in particular Theory of Mind (ToM), in schizophrenia has yielded mixed findings to date. Very few studies, however, have assessed both clinical insight and cognitive insight when examining their relationships with ToM in schizophrenia. The current study thus investigated the relationship between clinical insight, cognitive insight, and ToM in a sample of 56 patients with schizophrenia and 30 healthy controls. Twenty-seven patients were classified as low in clinical insight according to their scores on the 'insight' item (G12) of the Positive and Negative Syndrome Scale (PANSS). Moreover, cognitive insight and ToM were assessed with the Beck Cognitive Insight Scale (BCIS) and the Yoni task, respectively. The results indicated that patients with poor clinical insight performed worse on tasks of second-order cognitive and affective ToM, while the ToM performance of patients with high clinical insight was equivalent to that of healthy controls. Furthermore, while clinical insight was correlated with ToM and clinical symptoms, cognitive insight did not correlate with clinical insight, ToM, or clinical symptoms. Clinical insight thus appears to be an important factor related to ToM in schizophrenia.

  5. Insights into electromagnetic interaction mechanisms.

    PubMed

    Goodman, Reba; Blank, Martin

    2002-07-01

    Low frequency (< 300 Hz) electromagnetic (EM) fields induce biological changes that include effects ranging from increased enzyme reaction rates to increased transcript levels for specific genes. The induction of stress gene HSP70 expression by exposure to EM fields provides insight into how EM fields interact with cells and tissues. Insights into the mechanism(s) are also provided by examination of the interaction of EM fields with moving charges and their influence on enzyme reaction rates in cell-free systems. Biological studies with in vitro model systems have focused, in general, on the nature of the signal transduction pathways involved in response to EM fields. It is likely, however, that EM fields also interact directly with electrons in DNA to stimulate biosynthesis. Identification of an EM field-sensitive DNA sequence in the heat shock 70 (HSP70) promoter, points to the application of EM fields in two biomedical applications: cytoprotection and gene therapy. EM field induction of the stress protein hsp70 may also provide a useful biomarker for establishing a science-based safety standard for the design of cell phones and their transmission towers.

  6. Insight with hands and things.

    PubMed

    Vallée-Tourangeau, Frédéric; Steffensen, Sune Vork; Vallée-Tourangeau, Gaëlle; Sirota, Miroslav

    2016-10-01

    Two experiments examined whether different task ecologies influenced insight problem solving. The 17 animals problem was employed, a pure insight problem. Its initial formulation encourages the application of a direct arithmetic solution, but its solution requires the spatial arrangement of sets involving some degree of overlap. Participants were randomly allocated to either a tablet condition where they could use a stylus and an electronic tablet to sketch a solution or a model building condition where participants were given material with which to build enclosures and figurines. In both experiments, participants were much more likely to develop a working solution in the model building condition. The difference in performance elicited by different task ecologies was unrelated to individual differences in working memory, actively open-minded thinking, or need for cognition (Experiment 1), although individual differences in creativity were correlated with problem solving success in Experiment 2. The discussion focuses on the implications of these findings for the prevailing metatheoretical commitment to methodological individualism that places the individual as the ontological locus of cognition. PMID:27569687

  7. GOES-R: Satellite Insight

    NASA Technical Reports Server (NTRS)

    Fitzpatrick, Austin J.; Leon, Nancy J.; Novati, Alexander; Lincoln, Laura K.; Fisher, Diane K.

    2012-01-01

    GOES-R: Satellite Insight seeks to bring awareness of the GOES-R (Geostationary Operational Environmental Satellite -- R Series) satellite currently in development to an audience of all ages on the emerging medium of mobile games. The iPhone app (Satellite Insight) was created for the GOES-R Program. The app describes in simple terms the types of data products that can be produced from GOES-R measurements. The game is easy to learn, yet challenging for all audiences. It includes educational content and a path to further information about GOESR, its technology, and the benefits of the data it collects. The game features action-puzzle game play in which the player must prevent an overflow of data by matching falling blocks that represent different types of GOES-R data. The game adds more different types of data blocks over time, as long as the player can prevent a data overflow condition. Points are awarded for matches, and players can compete with themselves to beat their highest score.

  8. Superconductivity in transition metals.

    PubMed

    Slocombe, Daniel R; Kuznetsov, Vladimir L; Grochala, Wojciech; Williams, Robert J P; Edwards, Peter P

    2015-03-13

    A qualitative account of the occurrence and magnitude of superconductivity in the transition metals is presented, with a primary emphasis on elements of the first row. Correlations of the important parameters of the Bardeen-Cooper-Schrieffer theory of superconductivity are highlighted with respect to the number of d-shell electrons per atom of the transition elements. The relation between the systematics of superconductivity in the transition metals and the periodic table high-lights the importance of short-range or chemical bonding on the remarkable natural phenomenon of superconductivity in the chemical elements. A relationship between superconductivity and lattice instability appears naturally as a balance and competition between localized covalent bonding and so-called broken covalency, which favours d-electron delocalization and superconductivity. In this manner, the systematics of superconductivity and various other physical properties of the transition elements are related and unified.

  9. The Heliosphere in Transition

    NASA Astrophysics Data System (ADS)

    Kasper, Justin

    2015-04-01

    The heliosphere consists of the connective tissue of particles, fields and photons that mediate our interaction with the Sun and with interstellar space. Exploration of the heliosphere yields clues to the nature of environments we cannot reach ourselves, illuminating the composition of the solar interior, or the acceleration of cosmic rays in the galaxy. The heliosphere is also a laboratory for us to understand the fundamental physics of magnetized plasma, from heating and instabilities to coupling with neutral gas and dust. This talk will review some of the most exciting recent results in the heliosphere with a focus on transitions: what we can learn by exploring transitions within the heliosphere, how the heliosphere is responding to the long term transition in solar activity, and how our very view of the heliosphere is in transition with upcoming missions such as Solar Probe Plus, Solar Orbiter and IMAP.

  10. Superconductivity in transition metals.

    PubMed

    Slocombe, Daniel R; Kuznetsov, Vladimir L; Grochala, Wojciech; Williams, Robert J P; Edwards, Peter P

    2015-03-13

    A qualitative account of the occurrence and magnitude of superconductivity in the transition metals is presented, with a primary emphasis on elements of the first row. Correlations of the important parameters of the Bardeen-Cooper-Schrieffer theory of superconductivity are highlighted with respect to the number of d-shell electrons per atom of the transition elements. The relation between the systematics of superconductivity in the transition metals and the periodic table high-lights the importance of short-range or chemical bonding on the remarkable natural phenomenon of superconductivity in the chemical elements. A relationship between superconductivity and lattice instability appears naturally as a balance and competition between localized covalent bonding and so-called broken covalency, which favours d-electron delocalization and superconductivity. In this manner, the systematics of superconductivity and various other physical properties of the transition elements are related and unified. PMID:25666075

  11. Alternative fuel transit buses

    SciTech Connect

    Motta, R.; Norton, P.; Kelly, K.

    1996-10-01

    The National Renewable Energy Laboratory (NREL) is a U.S. Department of Energy (DOE) national laboratory; this project was funded by DOE. One of NREL`s missions is to objectively evaluate the performance, emissions, and operating costs of alternative fuel vehicles so fleet managers can make informed decisions when purchasing them. Alternative fuels have made greater inroads into the transit bus market than into any other. Each year, the American Public Transit Association (APTA) surveys its members on their inventory and buying plans. The latest APTA data show that about 4% of the 50,000 transit buses in its survey run on an alternative fuel. Furthermore, 1 in 5 of the new transit buses that members have on order are alternative fuel buses. This program was designed to comprehensively and objectively evaluate the alternative fuels in use in the industry.

  12. Transitions in biofilm formation

    NASA Astrophysics Data System (ADS)

    Gordon, Vernita; Thatcher, Travis; Cooley, Benjamin

    2011-03-01

    Biofilms are multicellular, dynamic communities formed by interacting unicellular organisms bound to a surface. Forming a biofilm is a developmental process, characterized by sequential changes in gene expression and behavior as bacteria and yeast progress from discrete, free-swimming cells though stages that arrive at a mature biofilm. We are developing automated metrics to identify key transitions in early biofilm formation as cells attach to a surface, populate that surface, and adhere to each other to form early microcolonies. Our metrics use high-throughput tracking and analysis of microscopy movies to localize these transitions in space and time. Each of these transitions is associated with a loss of entropy in the bacterial system and, therefore, with biological activity that drives this loss of entropy. Better understanding of these transitions will allow automated determination of the strength and turn-on of attractive cell-surface and cell-cell interactions as biofilm development progresses.

  13. Melting of Transition Metals

    SciTech Connect

    Ross, M; Japel, S; Boehler, R

    2005-04-11

    We review the transition melting studies carried out at Mainz, and describe a recently developed model used to explain that the relatively low melting slopes are due to the partially filled d-bands, and the persistence of the pressure induced s-d transition. The basic tenets of the model have now been reconfirmed by new measurements for Cu and Ni. The measurements show that Cu which has a filled 3d-band, has a melt slope that is about 2.5 greater than its neighbor Ni. In the case of Mo, the apparent discrepancy of DAC melting measurements with shock melting can be explained by accounting for the change in melt slope due to the bcc-cp transition observed in the shock studies. The Fe melt curve is revisited. The possible relevance of the Jahn-Teller effect and recently observed transition metal melts with Icosahedral Short-Range Order (ISRO) is discussed.

  14. Palaeontology: turtles in transition.

    PubMed

    Lee, Michael S Y

    2013-06-17

    One of the major remaining gaps in the vertebrate fossil record concerns the origin of turtles. The enigmatic little reptile Eunotosaurus could represent an important transitional form, as it has a rudimentary shell that resembles the turtle carapace.

  15. Transit Timing Variations

    NASA Video Gallery

    The animation shows the difference between planet transit timing of single and multiple planet system. In tightly packed planetary systems, the gravitational pull of the planets among themselves ca...

  16. New insights into TRAP1 pathway

    PubMed Central

    Matassa, Danilo Swann; Amoroso, Maria Rosaria; Maddalena, Francesca; Landriscina, Matteo; Esposito, Franca

    2012-01-01

    Tumor Necrosis Factor Receptor-Associated Protein 1 (TRAP1) is a mitochondrial heat shock protein involved in the protection from DNA damages and apoptosis induced by oxidants and several other stress conditions. Despite the well-characterized role in the regulation of mitochondrial integrity, through the interaction with cyclophilin D, a mitochondrial permeability transition pore regulator, several recent studies contributed to draw a more complex “picture” of the TRAP1 pathway: most of these updated functions arise from the identification of novel specific TRAP1 “client” proteins and from the recent discovery of multiple subcellular localizations/functions for this chaperone. This review briefly highlights some general features of TRAP1, and among others its role in cytoprotection, summarizing many different functions, which contribute to its protective role upon several stress inducers. Of note, particular emphasis is given to the recent findings on the regulation of Endoplasmic Reticulum stress and protein quality control by TRAP1, as well as to its role in regulating calcium homeostasis throughout its client protein Sorcin. Starting from the above observations a preliminary “TRAP1 signature” is provided and a new intriguing and interesting field to explore is discussed. Several questions are still open given the complexity of such mechanisms. However, by translating these recent insights at the molecular and cellular levels into personalized individual anticancer treatments, designing novel strategies based on the simultaneous inhibition of multiple tumor-specific pathways, and contemplating subcellular-targeted approaches aimed at reverting drug resistance and improving antitumor activity the struggle to combat cancer become more successful and closer. PMID:22432061

  17. Urban guideway transit workshop: Proceedings

    SciTech Connect

    Larsen, H. )

    1992-03-01

    On March 20--21, 1991, EPRI sponsored a workshop on urban guideway transit. The purpose of this workshop was to provide utility managers with increased knowledge about urban guideway transit options, public policy regarding transit, and the effect of transit options on utility operations. With this information utilities should be better prepared to make decisions about transit development in their service areas. The workshop also provided EPRI with ideas and information for developing an R D project plan for urban guideway transit.

  18. Stability, transition and turbulence

    NASA Technical Reports Server (NTRS)

    Hussaini, M. Y.

    1987-01-01

    A glimpse is provided of the research program in stability, transition, and turbulence based on numerical simulations. This program includes both the so-called abrupt and the restrained transition processes. Attention is confined to the prototype problems of channel flow and the parallel boundary layer in the former category and the Taylor-Couette flow in the latter category. It covers both incompressible flows and supersonic flows. Some representative results are presented.

  19. Stability, transition and turbulence

    NASA Technical Reports Server (NTRS)

    Hussaini, M. Y.

    1987-01-01

    A glimpse is provided of the research program in stability, transition and turbulence based on numerical simulations. This program includes both the so-called abrupt and the restrained transition processes. Attention is confined to the prototype problems of channel flow and the parallel boundary layer in the former category and the Taylor-Couette flow in the latter category. It covers both incompressible flows and supersonic flows. Some representative results are presented.

  20. Matter in transition

    DOE PAGES

    Anderson, Lara B.; Gray, James; Raghuram, Nikhil; Taylor, Washington

    2016-04-13

    In this study, we explore a novel type of transition in certain 6D and 4D quantum field theories, in which the matter content of the theory changes while the gauge group and other parts of the spectrum remain invariant. Such transitions can occur, for example, for SU(6) and SU(7) gauge groups, where matter fields in a three-index antisymmetric representation and the fundamental representation are exchanged in the transition for matter in the two-index antisymmetric representation. These matter transitions are realized by passing through superconformal theories at the transition point. We explore these transitions in dual F-theory and heterotic descriptions, wheremore » a number of novel features arise. For example, in the heterotic description the relevant 6D SU(7) theories are described by bundles on K3 surfaces where the geometry of the K3 is constrained in addition to the bundle structure. On the F-theory side, non-standard representations such as the three-index antisymmetric representation of SU(N) require Weierstrass models that cannot be realized from the standard SU(N) Tate form. We also briefly describe some other situations, with groups such as Sp(3), SO(12), and SU(3), where analogous matter transitions can occur between different representations. For SU(3), in particular, we find a matter transition between adjoint matter and matter in the symmetric representation, giving an explicit Weierstrass model for the F-theory description of the symmetric representation that complements another recent analogous construction.« less

  1. Parity-violating electric-dipole transitions in helium

    NASA Technical Reports Server (NTRS)

    Hiller, J.; Sucher, J.; Bhatia, A. K.; Feinberg, G.

    1980-01-01

    The paper examines parity-violating electric-dipole transitions in He in order to gain insight into the reliability of approximate calculations which are carried out for transitions in many-electron atoms. The contributions of the nearest-lying states are computed with a variety of wave functions, including very simple product wave functions, Hartree-Fock functions and Hylleraas-type wave functions with up to 84 parameters. It is found that values of the matrix elements of the parity-violating interaction can differ considerably from the values obtained from the good wave functions, even when these simple wave functions give accurate values for the matrix elements in question

  2. Mode Transitions in Hall Effect Thrusters

    NASA Technical Reports Server (NTRS)

    Sekerak, Michael J.; Longmier, Benjamin W.; Gallimore, Alec D.; Brown, Daniel L.; Hofer, Richard R.; Polk, James E.

    2013-01-01

    Mode transitions have been commonly observed in Hall Effect Thruster (HET) operation where a small change in a thruster operating parameter such as discharge voltage, magnetic field or mass flow rate causes the thruster discharge current mean value and oscillation amplitude to increase significantly. Mode transitions in a 6-kW-class HET called the H6 are induced by varying the magnetic field intensity while holding all other operating parameters constant and measurements are acquired with ion saturation probes and ultra-fast imaging. Global and local oscillation modes are identified. In the global mode, the entire discharge channel oscillates in unison and azimuthal perturbations (spokes) are either absent or negligible. Downstream azimuthally spaced probes show no signal delay between each other and are very well correlated to the discharge current signal. In the local mode, signals from the azimuthally spaced probes exhibit a clear delay indicating the passage of "spokes" and are not well correlated to the discharge current. These spokes are localized oscillations propagating in the ExB direction that are typically 10-20% of the mean value. In contrast, the oscillations in the global mode can be 100% of the mean value. The transition between global and local modes occurs at higher relative magnetic field strengths for higher mass flow rates or higher discharge voltages. The thrust is constant through mode transition but the thrust-to-power decreased by 25% due to increasing discharge current. The plume shows significant differences between modes with the global mode significantly brighter in the channel and the near-field plasma plume as well as exhibiting a luminous spike on thruster centerline. Mode transitions provide valuable insight to thruster operation and suggest improved methods for thruster performance characterization.

  3. Venus Transit 2004

    NASA Astrophysics Data System (ADS)

    Mayo, L. A.; Odenwald, S. F.

    2002-09-01

    December 6th, 1882 was the last transit of the planet Venus across the disk of the sun. It was heralded as an event of immense interest and importance to the astronomical community as well as the public at large. There have been only six such occurrences since Galileo first trained his telescope on the heavens in 1609 and on Venus in 1610 where he concluded that Venus had phases like the moon and appeared to get larger and smaller over time. Many historians consider this the final nail in the coffin of the Ptolemaic, Earth centered solar system. In addition, each transit has provided unique opportunities for discovery such as measurement and refinement of the astronomical unit, calculation of longitudes on the earth, and detection of Venus' atmosphere. The NASA Sun Earth Connection Education Forum in partnership with the Solar System Exploration Forum, DPS, and a number of NASA space missions is developing plans for an international education program centered around the June 8, 2004 Venus transit. The transit will be visible in its entirety from Europe and partially from the East Coast of the United States. We will use a series of robotic observatories including the Telescopes In Education network distributed in latitude to provide observations of the transit that will allow middle and high school students to calculate the A.U. through application of parallax. We will also use Venus transit as a probe of episodes in American history (e.g. 1769: revolutionary era, 1882: post civil war era, and 2004: modern era). Museums and planetariums in the US and Europe will offer real time viewing of the transit and conduct educational programs through professional development seminars, public lectures, and planetarium shows. We are interested in soliciting advice from the research community to coordinate professional research interests with this program.

  4. Logical types and ostensive insight.

    PubMed

    Ahumada, J L

    1991-01-01

    Discrimination of analogic and digital modes in communication allows clearer distinction of transference (mutative) and extra-transference interpretation. Relying on explicit formulation, Strachey introduces 'implicit' mutative interpretation, which is explicitly extra-transferential but transferential as to process. Each interpretive verbalization has an analogic impact pertaining to the analogic unconscious level of archaic objects, and its emitter--the analyst--is its propositional subject. Interpretation can afford to be as explicit as possible inasmuch as it retains the metalevel in which the analyst can remain as third-party to what he formulates, but it must be gradual in making explicit the archaic object he actualizes. It is by 'withholding'--as Strachey says--the validation of the archaic relational analogic 'psychic reality' that is the referent of interpretive 'mapping', and not be verbal 'mapping' in itself, that the 'judgement of reality' underlying ostensive insight comes into play. PMID:1797721

  5. The Work of Cultural Transition: An Emerging Model.

    PubMed

    Ryba, Tatiana V; Stambulova, Natalia B; Ronkainen, Noora J

    2016-01-01

    In today's uncertain, fluid job market, transnational mobility has intensified. Though the concept of cultural transition is increasingly used in sport and career research, insight into the processes of how individuals produce their own development through work and relationships in shifting cultural patterns of meaning remains limited. The transnational industry of sports, in which athletes' psychological adjustment to cultural transitions has implications for both performance and meaningful life, serves as a backdrop for this article. This study applied the life story method to interviews with 15 professional and semi-professional athletes, focusing particularly on the cultural transition aspect of their transnational athletic careers. The aims of the study were to identify the developmental tasks of cultural transitions and strategies/mechanisms through which cultural transitions were enacted. Three underlying mechanisms of the transition process that assisted athletic career adaptability were social repositioning, negotiation of cultural practices, and meaning reconstruction. Based on the data analyses, a temporal model of cultural transition is proposed. The results of this research provide professionals working in the fields of career counseling and migrant support with a content framework for enhancing migrant workers' adaptabilities and psychological wellbeing.

  6. The Work of Cultural Transition: An Emerging Model

    PubMed Central

    Ryba, Tatiana V.; Stambulova, Natalia B.; Ronkainen, Noora J.

    2016-01-01

    In today’s uncertain, fluid job market, transnational mobility has intensified. Though the concept of cultural transition is increasingly used in sport and career research, insight into the processes of how individuals produce their own development through work and relationships in shifting cultural patterns of meaning remains limited. The transnational industry of sports, in which athletes’ psychological adjustment to cultural transitions has implications for both performance and meaningful life, serves as a backdrop for this article. This study applied the life story method to interviews with 15 professional and semi-professional athletes, focusing particularly on the cultural transition aspect of their transnational athletic careers. The aims of the study were to identify the developmental tasks of cultural transitions and strategies/mechanisms through which cultural transitions were enacted. Three underlying mechanisms of the transition process that assisted athletic career adaptability were social repositioning, negotiation of cultural practices, and meaning reconstruction. Based on the data analyses, a temporal model of cultural transition is proposed. The results of this research provide professionals working in the fields of career counseling and migrant support with a content framework for enhancing migrant workers’ adaptabilities and psychological wellbeing. PMID:27047436

  7. General trends of dihedral conformational transitions in a globular protein

    DOE PAGES

    Miao, Yinglong; Baudry, Jerome; Smith, Jeremy C.; McCammon, J. Andrew

    2016-02-15

    In this paper, dihedral conformational transitions are analyzed systematically in a model globular protein, cytochrome P450cam, to examine their structural and chemical dependences through combined conventional molecular dynamics (cMD), accelerated molecular dynamics (aMD) and adaptive biasing force (ABF) simulations. The aMD simulations are performed at two acceleration levels, using dihedral and dual boost, respectively. In comparison with cMD, aMD samples protein dihedral transitions approximately two times faster on average using dihedral boost, and ~3.5 times faster using dual boost. In the protein backbone, significantly higher dihedral transition rates are observed in the bend, coil, and turn flexible regions, followed bymore » the β bridge and β sheet, and then the helices. Moreover, protein side chains of greater length exhibit higher transition rates on average in the aMD-enhanced sampling. Side chains of the same length (particularly Nχ = 2) exhibit decreasing transition rates with residues when going from hydrophobic to polar, then charged and aromatic chemical types. The reduction of dihedral transition rates is found to be correlated with increasing energy barriers as identified through ABF free energy calculations. In conclusion, these general trends of dihedral conformational transitions provide important insights into the hierarchical dynamics and complex free energy landscapes of functional proteins.« less

  8. General trends of dihedral conformational transitions in a globular protein.

    PubMed

    Miao, Yinglong; Baudry, Jerome; Smith, Jeremy C; McCammon, J Andrew

    2016-04-01

    Dihedral conformational transitions are analyzed systematically in a model globular protein, cytochrome P450cam, to examine their structural and chemical dependences through combined conventional molecular dynamics (cMD), accelerated molecular dynamics (aMD) and adaptive biasing force (ABF) simulations. The aMD simulations are performed at two acceleration levels, using dihedral and dual boost, respectively. In comparison with cMD, aMD samples protein dihedral transitions approximately two times faster on average using dihedral boost, and ∼ 3.5 times faster using dual boost. In the protein backbone, significantly higher dihedral transition rates are observed in the bend, coil, and turn flexible regions, followed by the β bridge and β sheet, and then the helices. Moreover, protein side chains of greater length exhibit higher transition rates on average in the aMD-enhanced sampling. Side chains of the same length (particularly Nχ = 2) exhibit decreasing transition rates with residues when going from hydrophobic to polar, then charged and aromatic chemical types. The reduction of dihedral transition rates is found to be correlated with increasing energy barriers as identified through ABF free energy calculations. These general trends of dihedral conformational transitions provide important insights into the hierarchical dynamics and complex free energy landscapes of functional proteins. PMID:26799251

  9. The Work of Cultural Transition: An Emerging Model.

    PubMed

    Ryba, Tatiana V; Stambulova, Natalia B; Ronkainen, Noora J

    2016-01-01

    In today's uncertain, fluid job market, transnational mobility has intensified. Though the concept of cultural transition is increasingly used in sport and career research, insight into the processes of how individuals produce their own development through work and relationships in shifting cultural patterns of meaning remains limited. The transnational industry of sports, in which athletes' psychological adjustment to cultural transitions has implications for both performance and meaningful life, serves as a backdrop for this article. This study applied the life story method to interviews with 15 professional and semi-professional athletes, focusing particularly on the cultural transition aspect of their transnational athletic careers. The aims of the study were to identify the developmental tasks of cultural transitions and strategies/mechanisms through which cultural transitions were enacted. Three underlying mechanisms of the transition process that assisted athletic career adaptability were social repositioning, negotiation of cultural practices, and meaning reconstruction. Based on the data analyses, a temporal model of cultural transition is proposed. The results of this research provide professionals working in the fields of career counseling and migrant support with a content framework for enhancing migrant workers' adaptabilities and psychological wellbeing. PMID:27047436

  10. Radiative Transitions in Charmonium from Lattice QCD

    SciTech Connect

    Jozef Dudek; Robert Edwards; David Richards

    2006-01-17

    Radiative transitions between charmonium states offer an insight into the internal structure of heavy-quark bound states within QCD. We compute, for the first time within lattice QCD, the transition form-factors of various multipolarities between the lightest few charmonium states. In addition, we compute the experimentally unobservable, but physically interesting vector form-factors of the {eta}{sub c}, J/{psi} and {chi}{sub c0}. To this end we apply an ambitious combination of lattice techniques, computing three-point functions with heavy domain wall fermions on an anisotropic lattice within the quenched approximation. With an anisotropy {xi} = 3 at a{sub s} {approx} 0.1 fm we find a reasonable gross spectrum and a hyperfine splitting {approx}90 MeV, which compares favorably with other improved actions. In general, after extrapolation of lattice data at non-zero Q{sup 2} to the photopoint, our results agree within errors with all well measured experimental values. Furthermore, results are compared with the expectations of simple quark models where we find that many features are in agreement; beyond this we propose the possibility of constraining such models using our extracted values of physically unobservable quantities such as the J/{psi} quadrupole moment. We conclude that our methods are successful and propose to apply them to the problem of radiative transitions involving hybrid mesons, with the eventual goal of predicting hybrid meson photoproduction rates at the GlueX experiment.

  11. Nuclear Binding Near a Quantum Phase Transition

    NASA Astrophysics Data System (ADS)

    Elhatisari, Serdar; Li, Ning; Rokash, Alexander; Alarcón, Jose Manuel; Du, Dechuan; Klein, Nico; Lu, Bing-nan; Meißner, Ulf-G.; Epelbaum, Evgeny; Krebs, Hermann; Lähde, Timo A.; Lee, Dean; Rupak, Gautam

    2016-09-01

    How do protons and neutrons bind to form nuclei? This is the central question of ab initio nuclear structure theory. While the answer may seem as simple as the fact that nuclear forces are attractive, the full story is more complex and interesting. In this work we present numerical evidence from ab initio lattice simulations showing that nature is near a quantum phase transition, a zero-temperature transition driven by quantum fluctuations. Using lattice effective field theory, we perform Monte Carlo simulations for systems with up to twenty nucleons. For even and equal numbers of protons and neutrons, we discover a first-order transition at zero temperature from a Bose-condensed gas of alpha particles (4He nuclei) to a nuclear liquid. Whether one has an alpha-particle gas or nuclear liquid is determined by the strength of the alpha-alpha interactions, and we show that the alpha-alpha interactions depend on the strength and locality of the nucleon-nucleon interactions. This insight should be useful in improving calculations of nuclear structure and important astrophysical reactions involving alpha capture on nuclei. Our findings also provide a tool to probe the structure of alpha cluster states such as the Hoyle state responsible for the production of carbon in red giant stars and point to a connection between nuclear states and the universal physics of bosons at large scattering length.

  12. Transition from School to Work.

    ERIC Educational Resources Information Center

    Milner, Eileen R.

    1995-01-01

    This brief informational flyer presents practical information on the transition from school to work for students who are deaf-blind or have other severe disabilities. After defining transition, the flyer offers guidelines on: the age at which transition services should be started, areas that should be considered in a coordinated transition plan,…

  13. Navajo childbirth in transition.

    PubMed

    Waxman, A G

    1990-03-01

    For the Navajo Indians, the transition from home-centered childbearing practices based on religious ritual to biomedically directed childbirth in hospitals was completed over a relatively short time in the middle decades of this century. For Anglo-American society, the acceptance of medically oriented childbirth occurred during an equally short period earlier in the century. The transition was driven for both by many common factors. For Navajo women it was additionally influenced by the social and economic changes that affected the Reservation following the beginning of the Second World War. This paper examines the changes in Navajo childbearing practices and, for comparison, those of the dominant American society. It reviews factors that permitted the acceptance of biomedical childbirth by Navajo women and explores the health implications of the transition. PMID:2233169

  14. Signaling mechanisms underlying metamorphic transitions in animals.

    PubMed

    Heyland, Andreas; Moroz, Leonid L

    2006-12-01

    Metamorphosis in many animal groups involves a radical transition from a larval to a juvenile/adult body plan and the challenge of orchestrating 2 overlapping developmental programs simultaneously, that is, larval development and juvenile development. Metamorphic competence directly precedes this radical change in morphology and can be best described as the developmental potential of a larva to undergo the radical transition in response to internal or external signals. Several studies have employed genomic approaches (for example, microarrays or subtractive hybridization methods) to gain insights into the complexity of changes in gene expression associated with metamorphic transitions. Availability of this technology for an increasing number of organisms from diverse taxonomic groups expands the scope of species for which we can gain detailed understanding of the genetic and epigenetic architecture underlying metamorphosis. Here, we review metamorphosis in insects, amphibians, and several marine invertebrate species including the sea hare Aplysia californica and summarize mechanisms underlying the transition. We conclude that all metamorphoses share at least 4 components: (1) the differentiation of juvenile/adult structures, (2) the degeneration of larval structures, (3) metamorphic competence, and (4) change in habitat. While transcription levels detected by microarray or other molecular methods can vary significantly, some similarities can be observed. For example, transcripts related to stress response, immunity, and apoptosis are associated with metamorphosis in all investigated phyla. It also appears that signaling mediated by hormones and by nitric oxide can contribute to these stress-related responses and that these molecules can act as regulators of metamorphic transitions. This might indicate either that all of these distantly related organisms inherited the same basic regulatory machinery that was employed by their most recent common ancestor (RCA) in

  15. UTM: Universal Transit Modeller

    NASA Astrophysics Data System (ADS)

    Deeg, Hans J.

    2014-12-01

    The Universal Transit Modeller (UTM) is a light-curve simulator for all kinds of transiting or eclipsing configurations between arbitrary numbers of several types of objects, which may be stars, planets, planetary moons, and planetary rings. A separate fitting program, UFIT (Universal Fitter) is part of the UTM distribution and may be used to derive best fits to light-curves for any set of continuously variable parameters. UTM/UFIT is written in IDL code and its source is released in the public domain under the GNU General Public License.

  16. Can Helical Peptides Unwind One Turn at a Time? - Controlled Conformational Transitions in α,β(2,3)-Hybrid Peptides.

    PubMed

    Balamurugan, Dhayalan; Muraleedharan, Kannoth M

    2015-06-22

    Unfolding of helical trans-β(2,3) -hybrid peptides with (α-β)n α composition, when executed by increasing solvent polarity or temperature, proceeded in a systematic manner with the turns unwinding sequentially; C-terminal region of these peptides were first to unwind and the process propagated towards N terminus with more and more β residues equilibrating from the gauche to the anti rotameric state across Cα-Cβ . This is evidenced by clear change in their Cβ H signal splitting, (3)JCαH-CβH values, and sequential disappearance of i,i+2 NOEs.

  17. First insights into disassembled "evapotranspiration"

    NASA Astrophysics Data System (ADS)

    Chormański, Jarosław; Kleniewska, Małgorzata; Berezowski, Tomasz; Szporak-Wasilewska, Sylwia; Okruszko, Tomasz; Szatyłowicz, Jan; Batelaan, Okke

    2015-04-01

    In this work we present an initial data analysis obtained from a complex tool for measuring water fluxes in wetland ecosystems. The tool was designed to quantify processes related to interception storage on plants leafs. The measurements are conducted by combining readings from various instruments, including: eddy covariance tower (EC), field spectrometer, SapFlow system, rain gauges above and under canopy, soil moisture probes and other. The idea of this set-up is to provide continuous measurement of overall water flux from the ecosystem (EC tower), intercepted water volume and timing (field spectrometers), through-fall (rain gauges above and under canopy), transpiration (SapFlow), evaporation and soil moisture (soil moisture probes). Disassembling the water flux to the above components allows giving more insight to the interception related processes and differentiates them fromthe total evapotranspiration. The measurements are conducted in the Upper Biebrza Basin (NE Poland). The study area is part of the valley and is covered by peat soils (mainly peat moss with the exception of areas near the river) and receives no inundations waters of the Biebrza. The plant community of Agrostietum-Carici caninae has a dominant share here creating an up to 0.6 km wide belt along the river. The area is covered also by Caricion lasiocarpae as well as meadows and pastures Molinio-Arrhenatheretea, Phragmitetum communis. Sedges form a hummock pattern characteristic for the sedge communities in natural river valleys with wetland vegetation. The main result of the measurement set-up will be the analyzed characteristics and dynamics of interception storage for sedge ecosystems and a developed methodology for interception monitoring by use spectral reflectance technique. This will give a new insight to processes of evapotranspiration in wetlands and its component transpiration, evaporation from interception and evaporation from soil. Moreover, other important results of this project

  18. Insight Into Neurocognitive Dysfunction in Schizophrenia

    PubMed Central

    Medalia, Alice; Thysen, Julie

    2008-01-01

    Insight into psychotic symptoms is typically poor in schizophrenia; however, it is not known whether insight into neurocognitive impairment is similarly impaired. Most people with schizophrenia experience cognitive dysfunction, and the deficits in attention, memory, and critical thinking have been associated with poor functional outcome. As new treatments are developed for the cognitive impairments, it will be important to know whether patients will be receptive to yet another therapy. Insight is an important factor in treatment compliance and treatment outcome; however, it is not known if patients have insight into their cognitive dysfunction. In order to assess insight into neuro cognitive dysfunction, 75 subjects were administered the Measure of Insight into Cognition–Clinician Rated, a newly created measure based on the Scale to Access the Unawareness of Mental Disorder, that assesses insight into cognitive impairment. Subjects were also administered the Brief Assessment of Cognition in Schizophrenia and Independent Living Scale–Problem Solving to objectively assess neuropsychological status and problem-solving skills needed for independent living. Results demonstrated that virtually all subjects had cognitive impairment, yet insight into their neuro cognitive symptoms was limited. This finding has potential implications for treatment programs seeking to improve cognitive functioning in schizophrenia PMID:18199632

  19. Working wonders? investigating insight with magic tricks.

    PubMed

    Danek, Amory H; Fraps, Thomas; von Müller, Albrecht; Grothe, Benedikt; Ollinger, Michael

    2014-02-01

    We propose a new approach to differentiate between insight and noninsight problem solving, by introducing magic tricks as problem solving domain. We argue that magic tricks are ideally suited to investigate representational change, the key mechanism that yields sudden insight into the solution of a problem, because in order to gain insight into the magicians' secret method, observers must overcome implicit constraints and thus change their problem representation. In Experiment 1, 50 participants were exposed to 34 different magic tricks, asking them to find out how the trick was accomplished. Upon solving a trick, participants indicated if they had reached the solution either with or without insight. Insight was reported in 41.1% of solutions. The new task domain revealed differences in solution accuracy, time course and solution confidence with insight solutions being more likely to be true, reached earlier, and obtaining higher confidence ratings. In Experiment 2, we explored which role self-imposed constraints actually play in magic tricks. 62 participants were presented with 12 magic tricks. One group received verbal cues, providing solution relevant information without giving the solution away. The control group received no informative cue. Experiment 2 showed that participants' constraints were suggestible to verbal cues, resulting in higher solution rates. Thus, magic tricks provide more detailed information about the differences between insightful and noninsightful problem solving, and the underlying mechanisms that are necessary to have an insight.

  20. Mining Login Data for Actionable Student Insight

    ERIC Educational Resources Information Center

    Agnihotri, Lalitha; Aghababyan, Ani; Mojarad, Shirin; Riedesel, Mark; Essa, Alfred

    2015-01-01

    Student login data is a key resource for gaining insight into their learning experience. However, the scale and the complexity of this data necessitate a thorough exploration to identify potential actionable insights, thus rendering it less valuable compared to student achievement data. To compensate for the underestimation of login data…

  1. Serendipitous insights involving nonhuman primates.

    PubMed

    Morton, William R; Swindler, Kathryn

    2005-01-01

    Serendipity is discussed as a form of controlled chaos, a phenomenon in a class with synchronicity and other actions affecting research in terms of theory versus observation (e.g., "optional stopping"). Serendipity is a fundamental aspect of basic research, a profitable and normal outcome in the context of "informed observation." The serendipitous finding fits into the following pattern: it is unanticipated, anomalous, and strategic. All observations that have meaning must fit into some context in the observer's mind or suggest a revolutionary new context. It is critically important to maintain access to the resources provided by established primate centers and similar laboratories to capitalize in a timely way on serendipitous findings and to benefit from valuable discoveries made in more directly targeted development investments. Examples are given of serendipitous insights gained in experimentation and observation relative to nonhuman primate research, including both broad and narrow topics. Genomics, which uses comparison-based strategies and capitalizes on the DNA sequences of genetic information, presents what might seem the basis for endless serendipity because nonhuman primates are likely to share most genes present in the human genome. Other topics discussed include infant behavior, birth periodicity, leprosy, cystic fibrosis, environmental enrichment, endocrinology, drug development, and the rapidly expanding study of infectious diseases and pathogen-based bioterrorism. PMID:16179742

  2. Functional Insights from Structural Genomics

    SciTech Connect

    Forouhar,F.; Kuzin, A.; Seetharaman, J.; Lee, I.; Zhou, W.; Abashidze, M.; Chen, Y.; Montelione, G.; Tong, L.; et al

    2007-01-01

    Structural genomics efforts have produced structural information, either directly or by modeling, for thousands of proteins over the past few years. While many of these proteins have known functions, a large percentage of them have not been characterized at the functional level. The structural information has provided valuable functional insights on some of these proteins, through careful structural analyses, serendipity, and structure-guided functional screening. Some of the success stories based on structures solved at the Northeast Structural Genomics Consortium (NESG) are reported here. These include a novel methyl salicylate esterase with important role in plant innate immunity, a novel RNA methyltransferase (H. influenzae yggJ (HI0303)), a novel spermidine/spermine N-acetyltransferase (B. subtilis PaiA), a novel methyltransferase or AdoMet binding protein (A. fulgidus AF{_}0241), an ATP:cob(I)alamin adenosyltransferase (B. subtilis YvqK), a novel carboxysome pore (E. coli EutN), a proline racemase homolog with a disrupted active site (B. melitensis BME11586), an FMN-dependent enzyme (S. pneumoniae SP{_}1951), and a 12-stranded {beta}-barrel with a novel fold (V. parahaemolyticus VPA1032).

  3. Nursing Role Transition Preceptorship

    ERIC Educational Resources Information Center

    Batory, Susan M.

    2014-01-01

    The preceptorship clinical experience in a practical nursing (PN) program at a Midwestern community college is considered crucial to the PN students' transition from novice nurse to professional nurse. However, no research has been available to determine whether the preceptorship clinical accomplishes its purpose. A case study was conducted to…

  4. Indian science in transition.

    PubMed

    Singh, Seema

    2006-10-01

    India is a country in transition, and so is its science. Scientific institutions, researchers, regulatory agencies, and government policies are in a state of flux as changes are instigated to overcome the bureaucracy and inertia that are characteristic of a populous developing nation.

  5. Variational transition state theory

    SciTech Connect

    Truhlar, D.G.

    1993-12-01

    This research program involves the development of variational transition state theory (VTST) and semiclassical tunneling methods for the calculation of gas-phase reaction rates and selected applications. The applications are selected for their fundamental interest and/or their relevance to combustion.

  6. Learning for Life Transitions

    ERIC Educational Resources Information Center

    Varmecky, Jane Hyde

    2012-01-01

    Many adults return to formal learning situations to pursue lifelong learning goals because their lives are in transition from dealing with real-life problems such as divorce and re-marriage. The purpose of this study was to describe what couples learned that contributed to the success of their subsequent marriages and how they learned it. The…

  7. Families in Transition .

    ERIC Educational Resources Information Center

    Bundy, Michael L., Ed.; Gumaer, James, Ed.

    1984-01-01

    Focuses on disrupted families and the role of the school counselor in helping children adjust. Describes characteristics of healthy families, and discusses the transition to the blended family, effects of divorce groups on children's classroom behavior, counseling children in stepfamilies, single-parent families, and parenting strengths of single…

  8. Transitioning to CBT.

    ERIC Educational Resources Information Center

    Molina, Carla A.

    1995-01-01

    Discusses transitional situations of concurrent computer-based training (CBT) that occur in organizations, and provides instructional designers with adaptable checklists to use when communicating with managers and programmers about the tasks performed and the tools needed in designing and developing CBT. Tables present steps, applications,…

  9. The Education of Transition.

    ERIC Educational Resources Information Center

    Castles, Stephen; And Others

    1982-01-01

    The Foundation for Education with Production was organized to help African countries make the transition from colonial economies to socialism by providing an international network of resources to support educational innovations linking education with production. The theoretical basis for the foundation's work and its current activities are…

  10. A Survey Transition Course

    ERIC Educational Resources Information Center

    Johnston, William; McAllister, Alex M.

    2012-01-01

    Successful outcomes for a "Transition Course in Mathematics" have resulted from two unique design features. The first is to run the course as a "survey course" in mathematics, introducing sophomore-level students to a broad set of mathematical fields. In this single mathematics course, undergraduates benefit from an introduction of proof…

  11. Transition at hypersonic speeds

    NASA Technical Reports Server (NTRS)

    Morkovin, Mark V.

    1987-01-01

    Certain conjectures on the physics of instabilities in high-speed flows are discussed and the state of knowledge of hypersonic transition summarized. The case is made for an unpressured systematic research program in this area consisting of controlled microscopic experiments, theory, and numerical simulations.

  12. Transition Is Everyone's Job.

    ERIC Educational Resources Information Center

    Sherman, Jill Z.; Osborn, Sandra R.

    Vocationally at-risk students have one or a combination of handicaps affecting mobility, coordination, communication, self-care and/or cognition which may significantly interfere with the goals of successful student-to-adult transition, namely employment, productive work, and independent community living. A program for students with physical…

  13. String mediated phase transitions

    NASA Technical Reports Server (NTRS)

    Copeland, ED; Haws, D.; Rivers, R.; Holbraad, S.

    1988-01-01

    It is demonstrated from first principles how the existence of string-like structures can cause a system to undergo a phase transition. In particular, the role of topologically stable cosmic string in the restoration of spontaneously broken symmetries is emphasized. How the thermodynamic properties of strings alter when stiffness and nearest neighbor string-string interactions are included is discussed.

  14. Singing Smoothes Classroom Transitions

    ERIC Educational Resources Information Center

    Mathews, Sarah E.

    2012-01-01

    Just as humming a merry tune helped Snow White and her furry animal friends to quickly clean a filthy cottage in the movie "Snow White and the Seven Dwarfs" (Disney & Cottrell, 1937), singing can be an effective way to help keep young children fully engaged during classroom transitions. The purposes of this article are to: (1) consider why…

  15. Families in Transition.

    ERIC Educational Resources Information Center

    Britton, Patti O., Ed.; McGee, Michael, Ed.

    1987-01-01

    This issue of "Emphasis" deals with families in transition, providing some model programs for the new family and some historical perspectives on how families have developed over time. Articles include: (1) "Nostalgia on the Right" (Nancy Theriot); (2) "Heart to Heart" (Nancy Harrington-MacLennan); (3) "The Media Get the Message" (Janet Alyn); (4)…

  16. Water's second glass transition.

    PubMed

    Amann-Winkel, Katrin; Gainaru, Catalin; Handle, Philip H; Seidl, Markus; Nelson, Helge; Böhmer, Roland; Loerting, Thomas

    2013-10-29

    The glassy states of water are of common interest as the majority of H2O in space is in the glassy state and especially because a proper description of this phenomenon is considered to be the key to our understanding why liquid water shows exceptional properties, different from all other liquids. The occurrence of water's calorimetric glass transition of low-density amorphous ice at 136 K has been discussed controversially for many years because its calorimetric signature is very feeble. Here, we report that high-density amorphous ice at ambient pressure shows a distinct calorimetric glass transitions at 116 K and present evidence that this second glass transition involves liquid-like translational mobility of water molecules. This "double Tg scenario" is related to the coexistence of two liquid phases. The calorimetric signature of the second glass transition is much less feeble, with a heat capacity increase at Tg,2 about five times as large as at Tg,1. By using broadband-dielectric spectroscopy we resolve loss peaks yielding relaxation times near 100 s at 126 K for low-density amorphous ice and at 110 K for high-density amorphous ice as signatures of these two distinct glass transitions. Temperature-dependent dielectric data and heating-rate-dependent calorimetric data allow us to construct the relaxation map for the two distinct phases of water and to extract fragility indices m = 14 for the low-density and m = 20-25 for the high-density liquid. Thus, low-density liquid is classified as the strongest of all liquids known ("superstrong"), and also high-density liquid is classified as a strong liquid. PMID:24101518

  17. Transit of Extrasolar Planets

    NASA Technical Reports Server (NTRS)

    Doyle, Laurance R.

    1998-01-01

    During the past five years we have pursued the detection of extrasolar planets by the photometric transit method, i.e. the detection of a planet by watching for a drop in the brightness of the light as it crosses in front of a star. The planetary orbit must cross the line-of-sight and so most systems will not be lined up for such a transit to ever occur. However, we have looked at eclipsing binary systems which are already edge-on. Such systems must be very small in size as this makes the differential light change due to a transit much greater for a given planet size (the brightness difference will be proportional to the area of the transiting planet to the disc area of the star). Also, the planet forming region should be closer to the star as small stars are generally less luminous (that is, if the same thermal regime for planet formation applies as in the solar system). This led to studies of the habitable zone around other stars, as well. Finally, we discovered that our data could be used to detect giant planets without transits as we had been carefully timing the eclipses of the stars (using a GPS antenna for time) and this will drift by being offset by any giant planets orbiting around the system, as well. The best summary of our work may be to just summarize the 21 refereed papers produced during the time of this grant. This will be done is chronological order and in each section separately.

  18. Signal Transduction in Histidine Kinases: Insights from New Structures

    PubMed Central

    Bhate, Manasi P.; Molnar, Kathleen S.; Goulian, Mark; DeGrado, William F.

    2015-01-01

    Histidine kinases (HKs) are major players in bacterial signaling. There has been an explosion of new HK crystal structures in the last five years. We globally analyze the structures of HKs to yield insights into the mechanisms by which signals are transmitted to and across protein structures in this family. We interpret known enzymological data in the context of new structural data to show how asymmetry across the dimer interface is a key feature of signal transduction in HKs, and discuss how different HK domains undergo asymmetric-to-symmetric transitions during signal transduction and catalysis. A thermodynamic framework for signaling that encompasses these various properties is presented and the consequences of weak thermodynamic coupling are discussed. The synthesis of observations from enzymology, structural biology, protein engineering and thermodynamics paves the way for a deeper molecular understanding of histidine kinase signal transduction. PMID:25982528

  19. Hydrogen activation by frustrated lewis pairs: insights from computational studies.

    PubMed

    Rokob, Tibor András; Pápai, Imre

    2013-01-01

    Sterically encumbered Lewis acid-base pairs, the so-called frustrated Lewis pairs, can split dihydrogen heterolytically and act as transition metal free catalysts for the hydrogenation of unsaturated compounds. Here we review the results from our quantum chemical calculations aimed at the understanding of this remarkable class of reactions and we put them into the context of related works from other research groups. The thermodynamics of the H2 splitting reaction is discussed first; the role of acid-base properties, intramolecular cooperativity, and other factors is assessed, employing an energy partitioning scheme and also in the light of the latest experimental findings. The mechanism of hydrogen cleavage is then examined, and an overview about the applicability of our reactivity model involving synergistic electron transfers between H2 and preorganized Lewis acid/base centers is given. Finally, insights about catalytic cycles in FLP-mediated hydrogenations are summarized, pinpointing the diversity of the involved elementary steps and their possible sequences.

  20. Dynamics of Sleep Stage Transitions in Health and Disease

    NASA Astrophysics Data System (ADS)

    Kishi, Akifumi; Struzik, Zbigniew R.; Natelson, Benjamin H.; Togo, Fumiharu; Yamamoto, Yoshiharu

    2007-07-01

    Sleep dynamics emerges from complex interactions between neuronal populations in many brain regions. Annotated sleep stages from electroencephalography (EEG) recordings could potentially provide a non-invasive way to obtain valuable insights into the mechanisms of these interactions, and ultimately into the very nature of sleep regulation. However, to date, sleep stage analysis has been restricted, only very recently expanding the scope of the traditional descriptive statistics to more dynamical concepts of the duration of and transitions between vigilance states and temporal evaluation of transition probabilities among different stages. Physiological and/or pathological implications of the dynamics of sleep stage transitions have, to date, not been investigated. Here, we study detailed duration and transition statistics among sleep stages in healthy humans and patients with chronic fatigue syndrome, known to be associated with disturbed sleep. We find that the durations of waking and non-REM sleep, in particular deep sleep (Stages III and IV), during the nighttime, follow a power-law probability distribution function, while REM sleep durations follow an exponential function, suggestive of complex underlying mechanisms governing the onset of light sleep. We also find a substantial number of REM to non-REM transitions in humans, while this transition is reported to be virtually non-existent in rats. Interestingly, the probability of this REM to non-REM transition is significantly lower in the patients than in controls, resulting in a significantly greater REM to awake, together with Stage I to awake, transition probability. This might potentially account for the reported poor sleep quality in the patients because the normal continuation of sleep after either the lightest or REM sleep is disrupted. We conclude that the dynamical transition analysis of sleep stages is useful for elucidating yet-to-be-determined human sleep regulation mechanisms with a

  1. Transition States and transition state analogue interactions with enzymes.

    PubMed

    Schramm, Vern L

    2015-04-21

    Enzymatic transition states have lifetimes of a few femtoseconds (fs). Computational analysis of enzyme motions leading to transition state formation suggests that local catalytic site motions on the fs time scale provide the mechanism to locate transition states. An experimental test of protein fs motion and its relation to transition state formation can be provided by isotopically heavy proteins. Heavy enzymes have predictable mass-altered bond vibration states without altered electrostatic properties, according to the Born-Oppenheimer approximation. On-enzyme chemistry is slowed in most heavy proteins, consistent with altered protein bond frequencies slowing the search for the transition state. In other heavy enzymes, structural changes involved in reactant binding and release are also influenced. Slow protein motions associated with substrate binding and catalytic site preorganization are essential to allow the subsequent fs motions to locate the transition state and to facilitate the efficient release of products. In the catalytically competent geometry, local groups move in stochastic atomic motion on the fs time scale, within transition state-accessible conformations created by slower protein motions. The fs time scale for the transition state motions does not permit thermodynamic equilibrium between the transition state and stable enzyme states. Isotopically heavy enzymes provide a diagnostic tool for fast coupled protein motions to transition state formation and mass-dependent conformational changes. The binding of transition state analogue inhibitors is the opposite in catalytic time scale to formation of the transition state but is related by similar geometries of the enzyme-transition state and enzyme-inhibitor interactions. While enzymatic transition states have lifetimes as short as 10(-15) s, transition state analogues can bind tightly to enzymes with release rates greater than 10(3) s. Tight-binding transition state analogues stabilize the rare but

  2. Pure electronic metal-insulator transition at the interface of complex oxides.

    PubMed

    Meyers, D; Liu, Jian; Freeland, J W; Middey, S; Kareev, M; Kwon, Jihwan; Zuo, J M; Chuang, Yi-De; Kim, J W; Ryan, P J; Chakhalian, J

    2016-01-01

    In complex materials observed electronic phases and transitions between them often involve coupling between many degrees of freedom whose entanglement convolutes understanding of the instigating mechanism. Metal-insulator transitions are one such problem where coupling to the structural, orbital, charge, and magnetic order parameters frequently obscures the underlying physics. Here, we demonstrate a way to unravel this conundrum by heterostructuring a prototypical multi-ordered complex oxide NdNiO3 in ultra thin geometry, which preserves the metal-to-insulator transition and bulk-like magnetic order parameter, but entirely suppresses the symmetry lowering and long-range charge order parameter. These findings illustrate the utility of heterointerfaces as a powerful method for removing competing order parameters to gain greater insight into the nature of the transition, here revealing that the magnetic order generates the transition independently, leading to an exceptionally rare purely electronic metal-insulator transition with no symmetry change. PMID:27324948

  3. Pure electronic metal-insulator transition at the interface of complex oxides

    PubMed Central

    Meyers, D.; Liu, Jian; Freeland, J. W.; Middey, S.; Kareev, M.; Kwon, Jihwan; Zuo, J. M.; Chuang, Yi-De; Kim, J. W.; Ryan, P. J.; Chakhalian, J.

    2016-01-01

    In complex materials observed electronic phases and transitions between them often involve coupling between many degrees of freedom whose entanglement convolutes understanding of the instigating mechanism. Metal-insulator transitions are one such problem where coupling to the structural, orbital, charge, and magnetic order parameters frequently obscures the underlying physics. Here, we demonstrate a way to unravel this conundrum by heterostructuring a prototypical multi-ordered complex oxide NdNiO3 in ultra thin geometry, which preserves the metal-to-insulator transition and bulk-like magnetic order parameter, but entirely suppresses the symmetry lowering and long-range charge order parameter. These findings illustrate the utility of heterointerfaces as a powerful method for removing competing order parameters to gain greater insight into the nature of the transition, here revealing that the magnetic order generates the transition independently, leading to an exceptionally rare purely electronic metal-insulator transition with no symmetry change. PMID:27324948

  4. Pure electronic metal-insulator transition at the interface of complex oxides

    NASA Astrophysics Data System (ADS)

    Meyers, D.; Liu, Jian; Freeland, J. W.; Middey, S.; Kareev, M.; Kwon, Jihwan; Zuo, J. M.; Chuang, Yi-De; Kim, J. W.; Ryan, P. J.; Chakhalian, J.

    2016-06-01

    In complex materials observed electronic phases and transitions between them often involve coupling between many degrees of freedom whose entanglement convolutes understanding of the instigating mechanism. Metal-insulator transitions are one such problem where coupling to the structural, orbital, charge, and magnetic order parameters frequently obscures the underlying physics. Here, we demonstrate a way to unravel this conundrum by heterostructuring a prototypical multi-ordered complex oxide NdNiO3 in ultra thin geometry, which preserves the metal-to-insulator transition and bulk-like magnetic order parameter, but entirely suppresses the symmetry lowering and long-range charge order parameter. These findings illustrate the utility of heterointerfaces as a powerful method for removing competing order parameters to gain greater insight into the nature of the transition, here revealing that the magnetic order generates the transition independently, leading to an exceptionally rare purely electronic metal-insulator transition with no symmetry change.

  5. Transition to management -- A personal perspective

    SciTech Connect

    Williams, J.L.

    1998-02-01

    This paper explores one woman`s journey through her recent promotion into management, and will identify key factors that helped prepare and position her to be ready to exercise leadership through a formal management role. It discusses assessment of qualifications and skills, acquisition of needed skills, the influence of luck and timing, and the use of mentors and delegation as survival skills to get through the transition period and become fully functional as a manager. It also includes insights into sensitive issues such as how to relate to former peers, how to gain credibility as the junior member of the management team, and how to juggle family responsibilities with increased time commitments at work. It emphasizes the importance of acknowledging the help the authors receive in reaching their own career goals and offering the same kind of help and support to those in the early stages of their careers.

  6. Five Kepler Target Stars That Show Multiple Transiting Exoplanet Candidates

    NASA Astrophysics Data System (ADS)

    Steffen, Jason H.; Batalha, Natalie M.; Borucki, William J.; Buchhave, Lars A.; Caldwell, Douglas A.; Cochran, William D.; Endl, Michael; Fabrycky, Daniel C.; Fressin, François; Ford, Eric B.; Fortney, Jonathan J.; Haas, Michael J.; Holman, Matthew J.; Howell, Steve B.; Isaacson, Howard; Jenkins, Jon M.; Koch, David; Latham, David W.; Lissauer, Jack J.; Moorhead, Althea V.; Morehead, Robert C.; Marcy, Geoffrey; MacQueen, Phillip J.; Quinn, Samuel N.; Ragozzine, Darin; Rowe, Jason F.; Sasselov, Dimitar D.; Seager, Sara; Torres, Guillermo; Welsh, William F.

    2010-12-01

    We present and discuss five candidate exoplanetary systems identified with the Kepler spacecraft. These five systems show transits from multiple exoplanet candidates. Should these objects prove to be planetary in nature, then these five systems open new opportunities for the field of exoplanets and provide new insights into the formation and dynamical evolution of planetary systems. We discuss the methods used to identify multiple transiting objects from the Kepler photometry as well as the false-positive rejection methods that have been applied to these data. One system shows transits from three distinct objects while the remaining four systems show transits from two objects. Three systems have planet candidates that are near mean motion commensurabilities—two near 2:1 and one just outside 5:2. We discuss the implications that multi-transiting systems have on the distribution of orbital inclinations in planetary systems, and hence their dynamical histories, as well as their likely masses and chemical compositions. A Monte Carlo study indicates that, with additional data, most of these systems should exhibit detectable transit timing variations (TTVs) due to gravitational interactions, though none are apparent in these data. We also discuss new challenges that arise in TTV analyses due to the presence of more than two planets in a system.

  7. Fick's Insights on Liquid Diffusion

    SciTech Connect

    Narasimhan, T.N.

    2004-10-07

    In 1855, Adolph Fick published ''On Liquid Diffusion'', mathematically treating salt movements in liquids as a diffusion process, analogous to heat diffusion. Less recognized is the fact that Fick also provided a detailed account of the implications of salt diffusion to transport through membranes. A careful look at Fick (1855) shows that his conceptualization of molecular diffusion was more comprehensive than could be captured with the mathematical methods available to him, and therefore his expression, referred to as Fick's Law, dealt only with salt flux. He viewed salt diffusion in liquids as a binary process, with salt moving in one way and water moving in the other. Fick's analysis of the consequences of such a binary process operating in a hydrophilic pore in a membrane offers insights that are relevant to earth systems. This paper draws attention to Fick's rationale, and its implications to hydrogeological systems. Fick (1829-1901; Figure 1), a gifted scientist, published the first book on medical physics (Fick, 1858), discussing the application of optics, solid mechanics, gas diffusion, and heat budget to biological systems. Fick's paper is divisible into two parts. The first describes his experimental verification of the applicability of Fourier's equation to liquid diffusion. The second is a detailed discussion of diffusion through a membrane. Although Fick's Law specifically quantifies solute flux, Fick visualized a simultaneous movement of water and stated, ''It is evident that a volume of water equal to that of the salt passes simultaneously out of the upper stratum into the lower.'' (Fick, 1855, p.30). Fick drew upon Fourier's model purely by analogy. He assumed that concentration gradient impelled salt movement, without inquiring why concentration gradient should constitute a driving force. As for water movement, he stated intuitively, ''a force of suction comes into play on each side of the membrane, proportional to the difference of concentration

  8. Alternative fuel transit buses: The Pierce Transit Success Story

    SciTech Connect

    1996-10-01

    The Pierce transit program for operating mass transit buses on compressed natural gas (CNG) is described. Cost, reliability, fuel efficiency, emission of combustion products, and future trends are discussed.

  9. Cyclone Center: Insights on Historical Tropical Cyclones from Citizen Volunteers

    NASA Astrophysics Data System (ADS)

    Thorne, P.; Hennon, C. C.; Knapp, K. R.; Schreck, C. J., III; Stevens, S. E.; Kossin, J. P.; Rennie, J.; Hennon, P. A.; Kruk, M. C.

    2015-12-01

    The cyclonecenter.org project started in fall 2012 and has been collecting citizen scientist volunteer tropical cyclone intensity estimates ever since. The project is hosted by the Citizen Science Alliance (zooniverse) and the platform is supported by a range of scientists. We have over 30 years of satellite imagery of tropical cyclones but the analysis to date has been done on an ocean-basin by ocean-basin basis and worse still practices have changed over time. We therefore do not, presently, have a homogeneous record relevant for discerning climatic changes. Automated techniques can classify many of the images but have a propensity to be challenged during storm transitions. The problem is fundamentally one where many pairs of eyes are invaluable as there is no substitute for human eyes in discerning patterns. Each image is classified by ten unique users before it is retired. This provides a unique insight into the uncertainty inherent in classification. In the three years of the project much useful data has accrued. This presentation shall highlight some of the results and analyses to date and touch on insights as to what has worked and what perhaps has not worked so well. There are still many images left to complete so its far from too late to jump over to www.cyclonecenter.org and help out.

  10. Efferent Insights into Cochlear Mechanics

    NASA Astrophysics Data System (ADS)

    Cooper, Nigel P.; Guinan, John J.

    2011-11-01

    Medial olivocochlear efferent (MOCE) effects on tone-evoked basilar membrane (BM) vibrations are analyzed in terms of the vector differences between BM responses with and without MOCE stimulation. The technique is sensitive to rapid (i.e., "fast", τ≤100 ms) changes in both the amplitude and the phase of the BM responses, and reveals MOCE effects over much wider frequency and intensity ranges (for a given BM location) than previously envisioned. The findings confirm and extend previous suggestions that MOCE effects are brought about by at least two different, outer-hair-cell based mechanisms. The effects on BM responses to characteristic frequency (CF) tones are consistent with suggestions that the MOCEs affect both the stiffness and the damping of the cochlear partition (damping effects dominating at low levels, and stiffness effects dominating at high levels). The analyses also indicate that MOCE activity can enhance, rather than inhibit, BM responses to low frequency tones (well below CF)—albeit by miniscule amounts. If one assumes that all of the mechanical effects of MOCE activation are brought about via gain changes in a single "cochlear amplifier" [4], these results seem to reveal that this amplifier exhibits a frequency-dependent transition from negative feedback (below CF) to positive feedback (near CF). This scenario is reminiscent of the type of amplification proposed by Mountain et al. a long, long time ago [9].

  11. Mesoproterozoic - Tonian Paleogeography: New Insights

    NASA Astrophysics Data System (ADS)

    Pisarevsky, S. A.

    2015-12-01

    Mesoproterozic - Tonian (1600-850 Ma) times are generally associated with a significant part of supercontinental cycle: assembly and breakup of Nuna followed by assembly of Rodinia, The understanding of these processes is hampered by a deficit of reliable geochronological, paleomagnetic and other datasets. Consequently there is a variety of opinions about paleogeographic locations of many Precambrian cratons and terranes and about their kinematics. Almost every new well-dated paleomagnetic pole, or re-dated old paleopole, or discovered LIP event causes significant reconsideration of existing paleogeographic models. Many new exiting results have been reported in last few years from Baltica, Siberia, North China, Australia, Congo-São Francisco and other parts of Nuna and Rodinia. Recent testings of some popular paleogeographic reconstructions (e.g. SAMBA) and re-interpretation of orogenic histories (e.g. Grenville and Sveconorwegian) also require some revisiting of Mesoproterozoic - Tonian paleogeography. This study summarises these new data and new ideas. Proposed updated positions of some continents are now better justified. Most changes are associated with North China and Congo-São Francisco cratons. Kinematics of the transitional period between the breakup of Nuna and the assembly of Rodinia is now better understood and better constrained, but some aspects are still enigmatic and controversial.

  12. Trajectory description of the quantum-classical transition for wave packet interference

    NASA Astrophysics Data System (ADS)

    Chou, Chia-Chun

    2016-08-01

    The quantum-classical transition for wave packet interference is investigated using a hydrodynamic description. A nonlinear quantum-classical transition equation is obtained by introducing a degree of quantumness ranging from zero to one into the classical time-dependent Schrödinger equation. This equation provides a continuous description for the transition process of physical systems from purely quantum to purely classical regimes. In this study, the transition trajectory formalism is developed to provide a hydrodynamic description for the quantum-classical transition. The flow momentum of transition trajectories is defined by the gradient of the action function in the transition wave function and these trajectories follow the main features of the evolving probability density. Then, the transition trajectory formalism is employed to analyze the quantum-classical transition of wave packet interference. For the collision-like wave packet interference where the propagation velocity is faster than the spreading speed of the wave packet, the interference process remains collision-like for all the degree of quantumness. However, the interference features demonstrated by transition trajectories gradually disappear when the degree of quantumness approaches zero. For the diffraction-like wave packet interference, the interference process changes continuously from a diffraction-like to collision-like case when the degree of quantumness gradually decreases. This study provides an insightful trajectory interpretation for the quantum-classical transition of wave packet interference.

  13. 75 FR 76921 - Tobacco Transition Payment Program; Tobacco Transition Assessments

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-12-10

    ... Corporation 7 CFR Part 1463 RIN 0560-AH30 Tobacco Transition Payment Program; Tobacco Transition Assessments... Commodity Credit Corporation (CCC) is modifying the regulations for the Tobacco Transition Payment Program (TTPP) to clarify, consistent with current practice and as required by the Fair and Equitable...

  14. Transition Planning: A Team Effort. NICHCY Transition Summary, TS10.

    ERIC Educational Resources Information Center

    Gutierrez, Mary Kate

    This summary on transition planning provides ideas and information on how students, families, school personnel, service providers, and others can work together to help students with a disability make a smooth transition after leaving high school. It focuses on creative transition planning and services that use all the resources that exist in…

  15. LAMPF transition region

    SciTech Connect

    Sander, O.R.

    1982-06-01

    After describing the transition region between the LAMPF drift-tube linac and side-coupled linac, we discuss the function of the region, its present shortcomings, and the need for a redesign. Then we present the new design, its advantages, and its expected performance. Included are detailed results of beam-dynamics studies giving the ranges of input- and output-beam shapes that can be successfully matched in the new transition region. To improve the present operation of the two linacs, we suggest small changes that will allow us to easily match the beam between the two linacs. Finally we describe the methods used in our beam-dynamic studies so that effects of future improvements to the new design can be examined.

  16. Models for transition clinics.

    PubMed

    Carrizosa, Jaime; An, Isabelle; Appleton, Richard; Camfield, Peter; Von Moers, Arpad

    2014-08-01

    Transition is a purposeful, planned process that addresses the medical, psychosocial, educational, and vocational needs of adolescents and young adults with chronic medical conditions, as they advance from a pediatric and family-centered to an adult, individual focused health care provider. This article describes some of the models for transition clinics or services for epilepsy in five countries (Canada, France, Colombia, Germany, and the United Kingdom). These models include joint adult and pediatric clinics, algorithm-driven service, and a check list system in the context of pediatric care. Evaluation of these models is limited, and it is not possible to choose an optimal program. The attitude and motivation of health care providers may be the most important elements. PMID:25209087

  17. Radiative Transitions in Charmonium

    SciTech Connect

    Jozef Dudek; Robert Edwards; David Richards

    2005-10-01

    The form factors for the radiative transitions between charmonium mesons are investigated. We employ an anisotropic lattice using a Wilson gauge action, and domain-wall fermion action. We extrapolate the form factors to Q{sup 2} = 0, corresponding to a real photon, using quark-model-inspired functions. Finally, comparison is made with photocouplings extracted from the measured radiative widths, where known. Our preliminary results find photocouplings commensurate with these experimentally extracted values.

  18. The major evolutionary transitions.

    PubMed

    Szathmáry, E; Smith, J M

    1995-03-16

    There is no theoretical reason to expect evolutionary lineages to increase in complexity with time, and no empirical evidence that they do so. Nevertheless, eukaryotic cells are more complex than prokaryotic ones, animals and plants are more complex than protists, and so on. This increase in complexity may have been achieved as a result of a series of major evolutionary transitions. These involved changes in the way information is stored and transmitted.

  19. High speed transition prediction

    NASA Technical Reports Server (NTRS)

    Gasperas, Gediminis

    1992-01-01

    The main objective of this work period was to develop, acquire and apply state-of-the-art tools for the prediction of transition at high speeds at NASA Ames. Although various stability codes as well as basic state codes were acquired, the development of a new Parabolized Stability Equation (PSE) code was minimal. The time that was initially allocated for development was used on other tasks, in particular for the Leading Edge Suction problem, in acquiring proficiency in various graphics tools, and in applying these tools to evaluate various Navier-Stokes and Euler solutions. The second objective of this work period was to attend the Transition and Turbulence Workshop at NASA Langley in July and August, 1991. A report on the Workshop follows. From July 8, 1991 to August 2, 1991, the author participated in the Transition and Turbulence Workshop at NASA Langley. For purposes of interest here, analysis can be said to consist of solving simplified governing equations by various analytical methods, such as asymptotic methods, or by use of very meager computer resources. From the composition of the various groups at the Workshop, it can be seen that analytical methods are generally more popular in Great Britain than they are in the U.S., possibly due to historical factors and the lack of computer resources. Experimenters at the Workshop were mostly concerned with subsonic flows, and a number of demonstrations were provided, among which were a hot-wire experiment to probe the boundary layer on a rotating disc, a hot-wire rake to map a free shear layer behind a cylinder, and the use of heating strips on a flat plate to control instability waves and consequent transition. A highpoint of the demonstrations was the opportunity to observe the rather noisy 'quiet' supersonic pilot tunnel in operation.

  20. NASA metric transition plan

    NASA Technical Reports Server (NTRS)

    1992-01-01

    NASA science publications have used the metric system of measurement since 1970. Although NASA has maintained a metric use policy since 1979, practical constraints have restricted actual use of metric units. In 1988, an amendment to the Metric Conversion Act of 1975 required the Federal Government to adopt the metric system except where impractical. In response to Public Law 100-418 and Executive Order 12770, NASA revised its metric use policy and developed this Metric Transition Plan. NASA's goal is to use the metric system for program development and functional support activities to the greatest practical extent by the end of 1995. The introduction of the metric system into new flight programs will determine the pace of the metric transition. Transition of institutional capabilities and support functions will be phased to enable use of the metric system in flight program development and operations. Externally oriented elements of this plan will introduce and actively support use of the metric system in education, public information, and small business programs. The plan also establishes a procedure for evaluating and approving waivers and exceptions to the required use of the metric system for new programs. Coordination with other Federal agencies and departments (through the Interagency Council on Metric Policy) and industry (directly and through professional societies and interest groups) will identify sources of external support and minimize duplication of effort.

  1. Youths Transitioning as Adult Learners

    ERIC Educational Resources Information Center

    Davis, C. Amelia

    2014-01-01

    This chapter considers how transitions to adulthood have been historically represented and presents alternative ways of thinking about transitions to adulthood through the context of adult basic education programs.

  2. The Myths of Mass Transit.

    ERIC Educational Resources Information Center

    Burke, Catherine G.

    1982-01-01

    Criticizes eight commonly held notions about the value of mass transit systems in public transportation programs. Alternative approaches for improving the quality and quantity of urban transit systems are discussed. (AM)

  3. Structural insights and functional implications of inter-individual variability in β2-adrenergic receptor

    PubMed Central

    Tandale, Aditi; Joshi, Manali; Sengupta, Durba

    2016-01-01

    The human β2-adrenergic receptor (β2AR) belongs to the G protein-coupled receptor (GPCR) family and due to its central role in bronchodilation, is an important drug target. The inter-individual variability in β2AR has been implicated in disease susceptibility and differential drug response. In this work, we identified nine potentially deleterious non-synonymous single nucleotide polymorphisms (nsSNPs) using a consensus approach. The deleterious nsSNPs were found to cluster near the ligand binding site and towards the G-protein binding site. To assess their molecular level effects, we built structural models of these receptors and performed atomistic molecular dynamics simulations. Most notably, in the Phe290Ser variant we observed the rotameric flip of Trp2866.48, a putative activation switch that has not been reported in β2AR thus far. In contrast, the variant Met82Lys was found to be the most detrimental to epinephrine binding. Additionally, a few of the nsSNPs were seen to cause perturbations to the lipid bilayer, while a few lead to differences at the G-protein coupling site. We are thus able to classify the variants as ranging from activating to damaging, prioritising them for experimental studies. PMID:27075228

  4. The transition to agricultural sustainability

    PubMed Central

    Ruttan, Vernon W.

    1999-01-01

    The transition to sustainable growth in agricultural production during the 21st century will take place within the context of a transition to a stable population and a possible transition to a stable level of material consumption. If the world fails to successfully navigate a transition to sustainable growth in agricultural production, the failure will be due more to a failure in the area of institutional innovation than to resource and environmental constraints. PMID:10339524

  5. Visual Analytics Technology Transition Progress

    SciTech Connect

    Scholtz, Jean; Cook, Kristin A.; Whiting, Mark A.; Lemon, Douglas K.; Greenblatt, Howard

    2009-09-23

    The authors provide a description of the transition process for visual analytic tools and contrast this with the transition process for more traditional software tools. This paper takes this into account and describes a user-oriented approach to technology transition including a discussion of key factors that should be considered and adapted to each situation. The progress made in transitioning visual analytic tools in the past five years is described and the challenges that remain are enumerated.

  6. Atomistic insights into rhodopsin activation from a dynamic model.

    PubMed

    Tikhonova, Irina G; Best, Robert B; Engel, Stanislav; Gershengorn, Marvin C; Hummer, Gerhard; Costanzi, Stefano

    2008-08-01

    Rhodopsin, the light sensitive receptor responsible for blue-green vision, serves as a prototypical G protein-coupled receptor (GPCR). Upon light absorption, it undergoes a series of conformational changes that lead to the active form, metarhodopsin II (META II), initiating a signaling cascade through binding to the G protein transducin (G(t)). Here, we first develop a structural model of META II by applying experimental distance restraints to the structure of lumi-rhodopsin (LUMI), an earlier intermediate. The restraints are imposed by using a combination of biased molecular dynamics simulations and perturbations to an elastic network model. We characterize the motions of the transmembrane helices in the LUMI-to-META II transition and the rearrangement of interhelical hydrogen bonds. We then simulate rhodopsin activation in a dynamic model to study the path leading from LUMI to our META II model for wild-type rhodopsin and a series of mutants. The simulations show a strong correlation between the transition dynamics and the pharmacological phenotypes of the mutants. These results help identify the molecular mechanisms of activation in both wild type and mutant rhodopsin. While static models can provide insights into the mechanisms of ligand recognition and predict ligand affinity, a dynamic model of activation could be applicable to study the pharmacology of other GPCRs and their ligands, offering a key to predictions of basal activity and ligand efficacy.

  7. Insight Is Not in the Problem: Investigating Insight in Problem Solving across Task Types

    PubMed Central

    Webb, Margaret E.; Little, Daniel R.; Cropper, Simon J.

    2016-01-01

    The feeling of insight in problem solving is typically associated with the sudden realization of a solution that appears obviously correct (Kounios et al., 2006). Salvi et al. (2016) found that a solution accompanied with sudden insight is more likely to be correct than a problem solved through conscious and incremental steps. However, Metcalfe (1986) indicated that participants would often present an inelegant but plausible (wrong) answer as correct with a high feeling of warmth (a subjective measure of closeness to solution). This discrepancy may be due to the use of different tasks or due to different methods in the measurement of insight (i.e., using a binary vs. continuous scale). In three experiments, we investigated both findings, using many different problem tasks (e.g., Compound Remote Associates, so-called classic insight problems, and non-insight problems). Participants rated insight-related affect (feelings of Aha-experience, confidence, surprise, impasse, and pleasure) on continuous scales. As expected we found that, for problems designed to elicit insight, correct solutions elicited higher proportions of reported insight in the solution compared to non-insight solutions; further, correct solutions elicited stronger feelings of insight compared to incorrect solutions. PMID:27725805

  8. Impaired insight into illness and cognitive insight in schizophrenia spectrum disorders: Resting state functional connectivity

    PubMed Central

    Gerretsen, Philip; Menon, Mahesh; Mamo, David C.; Fervaha, Gagan; Remington, Gary; Pollock, Bruce G.; Graff-Guerrero, Ariel

    2015-01-01

    Background Impaired insight into illness (clinical insight) in schizophrenia has negative effects on treatment adherence and clinical outcomes. Schizophrenia is described as a disorder of disrupted brain connectivity. In line with this concept, resting state networks (RSNs) appear differentially affected in persons with schizophrenia. Therefore, impaired clinical, or the related construct of cognitive insight (which posits that impaired clinical insight is a function of metacognitive deficits), may reflect alterations in RSN functional connectivity (fc). Based on our previous research, which showed that impaired insight into illness was associated with increased left hemisphere volume relative to right, we hypothesized that impaired clinical insight would be associated with increased connectivity in the DMN with specific left hemisphere brain regions. Methods Resting state MRI scans were acquired for participants with schizophrenia or schizoaffective disorder (n = 20). Seed-to-voxel and ROI-to-ROI fc analyses were performed using the CONN-fMRI fc toolbox v13 for established RSNs. Clinical and cognitive insight were measured with the Schedule for the Assessment of Insight—Expanded Version and Beck Cognitive Insight Scale, respectively, and included as the regressors in fc analyses. Results As hypothesized, impaired clinical insight was associated with increased connectivity in the default mode network (DMN) with the left angular gyrus, and also in the self-referential network (SRN) with the left insula. Cognitive insight was associated with increased connectivity in the dorsal attention network (DAN) with the right inferior frontal cortex (IFC) and left anterior cingulate cortex (ACC). Conclusion Increased connectivity in DMN and SRN with the left angular gyrus and insula, respectively, may represent neural correlates of impaired clinical insight in schizophrenia spectrum disorders, and is consistent with the literature attributing impaired insight to left

  9. Reconstructing Transition Knowledge in Taiwan

    ERIC Educational Resources Information Center

    Cheng, Chen-chen

    2012-01-01

    Taking a post-colonial stand and using school to work transition as an example, the author re-examines the special education discourses in Taiwan and attempts to construct alternate understandings of transition from sociological and cultural perspectives. A review of past transition literature and a survey of the educational background of the…

  10. Slow Transit Constipation.

    PubMed

    Wald, Arnold

    2002-08-01

    The diagnosis of slow transit functional constipation is based upon diagnostic testing of patients with idiopathic constipation who responded poorly to conservative measures such as fiber supplements, fluids, and stimulant laxatives. These tests include barium enema or colonoscopy, colonic transit of radio-opaque markers, anorectal manometry, and expulsion of a water-filled balloon. Plain abdominal films can identify megacolon, which can be further characterized by barium or gastrografin studies. Colonic transit of radio-opaque markers identifies patients with slow transit with stasis of markers in the proximal colon. However, anorectal function should be characterized to exclude outlet dysfunction, which may coexist with colonic inertia. Because slow colonic transit is defined by studies during which patients consume a high-fiber diet, fiber supplements are generally not effective, nor are osmotic laxatives that consist of unabsorbed sugars. Stimulant laxatives are considered first-line therapy, although studies often show a diminished colonic motor response to such agents. There is no evidence to suggest that chronic use of such laxatives is harmful if they are used two to three times per week. Polyethylene glycol with or without electrolytes may be useful in a minority of patients, often combined with misoprostol. I prefer to start with misoprostol 200 mg every other morning and increase to tolerance or efficacy. I see no advantage in prescribing misoprostol on a TID or QID basis or even daily because it increases cramping unnecessarily. This drug is not acceptable in young women who wish to become pregnant. An alternative may be colchicine, which is reported to be effective when given as 0.6 mg TID. Long-term efficacy has not been studied. Finally, biofeedback is a risk-free approach that has been reported as effective in approximately 60% of patients with slow transit constipation in the absence of outlet dysfunction. Although difficult to understand

  11. Quantum-classical transitions in complex networks

    NASA Astrophysics Data System (ADS)

    Javarone, Marco Alberto; Armano, Giuliano

    2013-04-01

    The inherent properties of specific physical systems can be used as metaphors for investigation of the behavior of complex networks. This insight has already been put into practice in previous work, e.g., studying the network evolution in terms of phase transitions of quantum gases or representing distances among nodes as if they were particle energies. This paper shows that the emergence of different structures in complex networks, such as the scale-free and the winner-takes-all networks, can be represented in terms of a quantum-classical transition for quantum gases. In particular, we propose a model of fermionic networks that allows us to investigate the network evolution and its dependence on the system temperature. Simulations, performed in accordance with the cited model, clearly highlight the separation between classical random and winner-takes-all networks, in full correspondence with the separation between classical and quantum regions for quantum gases. We deem this model useful for the analysis of synthetic and real complex networks.

  12. Alameda-Contra Costa Transit District (AC Transit) Fuel Cell Transit Buses: Preliminary Evaluation Results

    SciTech Connect

    Chandler, K.; Eudy, L.

    2007-03-01

    This report provides an evaluation of three prototype fuel cell-powered transit buses operating at AC Transit in Oakland, California, and six baseline diesel buses similar in design to the fuel cell buses.

  13. Recent Insights into the Neurobiology of Impulsivity

    PubMed Central

    Mitchell, Marci R.; Potenza, Marc N.

    2014-01-01

    Impulsivity is associated with various psychopathologies, and elevated impulsivity is typically disadvantageous. This manuscript reviews recent investigations into the neurobiology of impulsivity using human imaging techniques and animal models. Both human imaging and preclinical pharmacological manipulations have yielded important insights into the neurobiological underpinnings of impulsivity. A more thorough understanding of the complex neurobiology underlying aspects of impulsivity may provide insight into new treatment options that target elevated impulsivity and psychopathologies such as addictions. PMID:25431750

  14. Nonuniversal scaling of the magnetocaloric effect as an insight into spin-lattice interactions in manganites

    NASA Astrophysics Data System (ADS)

    Smith, Anders; Nielsen, Kaspar K.; Bez, Henrique N.; Bahl, Christian R. H.

    2016-08-01

    We measure the magnetocaloric effect of the manganite series La0.67Ca0.33 -xSrxMnO3 by determining the isothermal entropy change upon magnetization, using variable-field calorimetry. The results demonstrate that the field dependence of the magnetocaloric effect close to the critical temperature is not given uniquely by the critical exponents of the ferromagnetic-paramagnetic phase transition, i.e., the scaling is nonuniversal. A theoretical description based on the Bean-Rodbell model and taking into account compositional inhomogeneities is shown to be able to account for the observed field dependence. In this way the determination of the nonuniversal field dependence of the magnetocaloric effect close to a phase transition can be used as a method to gain insight into the strength of the spin-lattice interactions of magnetic materials. The approach is shown also to be applicable to first-order transitions.

  15. Insight and theory of mind in schizophrenia.

    PubMed

    Ng, Rowena; Fish, Scott; Granholm, Eric

    2015-01-30

    Theory of mind (ToM) impairment is common in individuals with schizophrenia and is associated with poor social functioning. Poor insight has also been linked to poor outcome in schizophrenia. Social developmental research has shown representations of self (insight) and representations of others (ToM) are related. In schizophrenia, contradictory reports of associations between insight and ToM have emerged, possibly due to a failure to account for neurocognitive impairments and symptoms associated with both mentalization constructs. This study investigated the relationships between ToM (intentions of others on the Hinting Task) and clinical and cognitive insight, while accounting for shared variance with neurocognitive impairment and symptom severity in 193 individuals with schizophrenia. Clinical, but not cognitive, insight was associated with ToM. A unique association between Awareness of Mental Illness and Hinting Task performance was found, independent of shared variance with neurocognition and symptoms. Importantly, ToM was found to mediate Awareness of Mental Illness and neurocognition. Results suggested that treatments targeting mentalization abilities that contribute to representations of self and others may improve insight deficits associated with poor outcome in schizophrenia.

  16. Insight and theory of mind in schizophrenia.

    PubMed

    Ng, Rowena; Fish, Scott; Granholm, Eric

    2015-01-30

    Theory of mind (ToM) impairment is common in individuals with schizophrenia and is associated with poor social functioning. Poor insight has also been linked to poor outcome in schizophrenia. Social developmental research has shown representations of self (insight) and representations of others (ToM) are related. In schizophrenia, contradictory reports of associations between insight and ToM have emerged, possibly due to a failure to account for neurocognitive impairments and symptoms associated with both mentalization constructs. This study investigated the relationships between ToM (intentions of others on the Hinting Task) and clinical and cognitive insight, while accounting for shared variance with neurocognitive impairment and symptom severity in 193 individuals with schizophrenia. Clinical, but not cognitive, insight was associated with ToM. A unique association between Awareness of Mental Illness and Hinting Task performance was found, independent of shared variance with neurocognition and symptoms. Importantly, ToM was found to mediate Awareness of Mental Illness and neurocognition. Results suggested that treatments targeting mentalization abilities that contribute to representations of self and others may improve insight deficits associated with poor outcome in schizophrenia. PMID:25467703

  17. Practice Makes Perfect? University Students' Response to a First-Year Transition Course

    ERIC Educational Resources Information Center

    Browning, Catherine; Sheffield, Suzanne Le-May

    2008-01-01

    This paper shares new insights on the first-year university student transition experience. Our research focuses on students' practice of academic skills developed in a "Foundations for Learning" course, from their own perspective, after they completed the course. Once they had an opportunity to practice what they learned in subsequent…

  18. Factors Affecting Students' Information Literacy as They Transition from High School to College

    ERIC Educational Resources Information Center

    Varlejs, Jana; Stec, Eileen

    2014-01-01

    Despite the considerable attention paid to the need to increase the information literacy of high school students in preparation for the transition to college, poor research skills still seem to be the norm. To gain insight into the problem, library instruction environments of nineteen high schools were explored. The schools were selected based on…

  19. Agile in Large-Scale Development Workshop: Coaching, Transitioning and Practicing

    NASA Astrophysics Data System (ADS)

    Nilsson, Thomas; Larsson, Andreas

    Agile in large-scale and complex development presents its own set of problems, both how to practice, transition and coaching. This workshop aims at bringing persons interested in this topic together to share tools, techniques and insights. The workshop will follow the increasingly popular “lightning talk + open space” format.

  20. Transition Metal Switchable Mirror

    SciTech Connect

    2009-08-21

    The switchable-mirrors technology was developed by Tom Richardson and Jonathan Slack of Berkeley Lab's Environmental Energy Technologies Division. By using transition metals rather than the rare earth metals used in the first metal-hydride switchable mirrors, Richardson and Slack were able to lower the cost and simplify the manufacturing process. Energy performance is improved as well, because the new windows can reflect or transmit both visible and infrared light. Besides windows for offices and homes, possible applications include automobile sunroofs, signs and displays, aircraft windows, and spacecraft.

  1. Wetting Transition in Water

    NASA Astrophysics Data System (ADS)

    Friedman, S. R.; Khalil, M.; Taborek, P.

    2013-11-01

    Optical images were used to study the wetting behavior of water on graphite, sapphire, and quartz along the liquid vapor coexistence curve from room temperature to 300°C. Wetting transitions were identified by the temperature at which the contact angle decreased to zero and also by the disappearance of dropwise condensation. These two methods yielded consistent values for the wetting temperatures, which were 185°C, 234°C, and 271°C for water on quartz, sapphire, and graphite, respectively. We compare our results with the theoretical predictions based on a simplified model of the water-substrate potential and sharp interfaces.

  2. Wetting transition in water.

    PubMed

    Friedman, S R; Khalil, M; Taborek, P

    2013-11-27

    Optical images were used to study the wetting behavior of water on graphite, sapphire, and quartz along the liquid vapor coexistence curve from room temperature to 300 °C. Wetting transitions were identified by the temperature at which the contact angle decreased to zero and also by the disappearance of dropwise condensation. These two methods yielded consistent values for the wetting temperatures, which were 185 °C, 234 °C, and 271 °C for water on quartz, sapphire, and graphite, respectively. We compare our results with the theoretical predictions based on a simplified model of the water-substrate potential and sharp interfaces.

  3. Transition Metal Switchable Mirror

    ScienceCinema

    None

    2016-07-12

    The switchable-mirrors technology was developed by Tom Richardson and Jonathan Slack of Berkeley Lab's Environmental Energy Technologies Division. By using transition metals rather than the rare earth metals used in the first metal-hydride switchable mirrors, Richardson and Slack were able to lower the cost and simplify the manufacturing process. Energy performance is improved as well, because the new windows can reflect or transmit both visible and infrared light. Besides windows for offices and homes, possible applications include automobile sunroofs, signs and displays, aircraft windows, and spacecraft. More information at: http://windows.lbl.gov/materials/chromogenics/default.htm

  4. Transition Metal Switchable Mirror

    ScienceCinema

    None

    2016-07-12

    The switchable-mirrors technology was developed by Tom Richardson and Jonathan Slack of Berkeley Lab's Environmental Energy Technologies Division. By using transition metals rather than the rare earth metals used in the first metal-hydride switchable mirrors, Richardson and Slack were able to lower the cost and simplify the manufacturing process. Energy performance is improved as well, because the new windows can reflect or transmit both visible and infrared light. Besides windows for offices and homes, possible applications include automobile sunroofs, signs and displays, aircraft windows, and spacecraft.

  5. MINEHOUND: transition to production

    NASA Astrophysics Data System (ADS)

    Daniels, David J.; Curtis, Paul; Hunt, Nigel; Braunstein, Jürgen; Merz, Armin

    2007-04-01

    The UK Department for International Development (DfID), in collaboration with the German Foreign Ministry (Auswärtiges Amt), contracted ERA Technology to carry out extensive field trials in Cambodia, Bosnia and Angola of an advanced technology, dual sensor, and hand-held landmine detector system called MINEHOUND TM. This detector combines a metal detector with a Ground Penetrating Radar (GPR). As a result of extremely successful trials MINEHOUND TM was developed as a product by ERA Technology and Vallon GmbH and has been available for sale since late 2006. This paper describes the transition to production of the detector.

  6. Electromagnetic transitions in hypernuclei

    SciTech Connect

    Chrien, R.E.

    1986-01-01

    The object of this review is to survey observations of electromagnetic transitions in hypernuclei and to point out contributions of these observations to an understanding of the effective two-body hyperon-nucleon forces in the nucleus. The discussion concentrates on lambda-hyperon nucleon potentials. Future plans for high resolution hypernuclear spectroscopy using Ge diode detectors is discussed, especially regarding the window of utility of such devices. Expected improvements in beam facilities are also reviewed. 9 refs., 4 figs., 1 tab. (DWL)

  7. Transition in Turner's syndrome.

    PubMed

    Saenger, Paul

    2004-06-01

    Management of the chromosomal condition Turner's syndrome requires consistent medical care, especially during the time when affected girls transition from childhood into adulthood. The medical problems that first develop during childhood of a patient with Turner's syndrome such as congenital heart disease, hearing loss, skeletal problems and dental and ophthalmological abnormalities, should be followed into adulthood. Providing the necessary continuum of care will require that medical centers develop teams with the appropriate expertise in treatment of Turner's syndrome. Now more than ever patients with Turner's syndrome have the capability of achieving their full potential, but it requires a multidisciplinary approach toward care throughout their lifetime.

  8. Transition Metal Homeostasis.

    PubMed

    Nies, Dietrich H; Grass, Gregor

    2009-08-01

    This chapter focuses on transition metals. All transition metal cations are toxic-those that are essential for Escherichia coli and belong to the first transition period of the periodic system of the element and also the "toxic-only" metals with higher atomic numbers. Common themes are visible in the metabolism of these ions. First, there is transport. High-rate but low-affinity uptake systems provide a variety of cations and anions to the cells. Control of the respective systems seems to be mainly through regulation of transport activity (flux control), with control of gene expression playing only a minor role. If these systems do not provide sufficient amounts of a needed ion to the cell, genes for ATP-hydrolyzing high-affinity but low-rate uptake systems are induced, e.g., ABC transport systems or P-type ATPases. On the other hand, if the amount of an ion is in surplus, genes for efflux systems are induced. By combining different kinds of uptake and efflux systems with regulation at the levels of gene expression and transport activity, the concentration of a single ion in the cytoplasm and the composition of the cellular ion "bouquet" can be rapidly adjusted and carefully controlled. The toxicity threshold of an ion is defined by its ability to produce radicals (copper, iron, chromate), to bind to sulfide and thiol groups (copper, zinc, all cations of the second and third transition period), or to interfere with the metabolism of other ions. Iron poses an exceptional metabolic problem due its metabolic importance and the low solubility of Fe(III) compounds, combined with the ability to cause dangerous Fenton reactions. This dilemma for the cells led to the evolution of sophisticated multi-channel iron uptake and storage pathways to prevent the occurrence of unbound iron in the cytoplasm. Toxic metals like Cd2+ bind to thiols and sulfide, preventing assembly of iron complexes and releasing the metal from iron-sulfur clusters. In the unique case of mercury, the

  9. An insight into functionalized calcium based inorganic nanomaterials in biomedicine: Trends and transitions.

    PubMed

    Sharma, Shweta; Verma, Ashwni; Teja, B Venkatesh; Pandey, Gitu; Mittapelly, Naresh; Trivedi, Ritu; Mishra, P R

    2015-09-01

    Over the recent years the use of biocompatible and biodegradable nanoparticles in biomedicine has become a significant priority. Calcium based ceramic nanoparticles like calcium phosphate (CaP) and calcium carbonate (CaCO3) are therefore considered as attractive carriers as they are naturally present in human body with nanosize range. Their application in tissue engineering and localized controlled delivery of bioactives for bones and teeth is well established now, but recently their use has increased significantly as carrier of bioactives through other routes also. These delivery systems have become most potential alternatives to other commonly used delivery system because of their cost effectiveness, biodegradability, chemical stability, controlled and stimuli responsive behaviour. This review comprehensively covers their characteristic features, method of preparation and applications but the thrust is to focus their recent development, functionalization and use in systemic delivery. On the same platform mineralization of other nanoparticulate delivery system which has widened their application drug delivery will be discussed. The emphasis has been given on their pH dependent properties which make them excellent carriers for tumour targeting and intracellular delivery. Finally this review also attempts to discuss their drawback which limits their clinical utility.

  10. Spin symmetry transitions make DNA strands separate. New insight into the mechanism of transcription

    NASA Astrophysics Data System (ADS)

    Tulub, Alexander A.; Stefanov, Vassily E.

    2015-12-01

    The DFT:B3LYP (6-31G** basis set) method, including the hyperfine and spin-orbit couplings (HFC and SOC, respectively), is used to study the separation of two complementary trinucleotide sequences, (dC-dG-dA)-(dG-dC-dT), upon the action of two Mg(2+) cofactors (a simplified model). The computations reveal a crossing of the singlet (S) potential energy surface by the triplet (T) surface at two distinct points. Within the crossing region the T curve lies below the S curve. Adhering to the concept of the minimal energy path, one can assume that the T path is more favorable compared to that of the S path. The T path is not simple; it consists of two, T+ and T-, curves initially separated by the HFC and SOC. On reaching the second crossing point, both curves merge into the T0 state, which facilitates the T → S transfer. Totally, the process of the two trinucleotide separation (the first step of transcription) appears as the S → T → S symmetry conversion.

  11. Systematic study of glass transition in low-molecular phthalonitriles: Insight from computer simulations

    NASA Astrophysics Data System (ADS)

    Guseva, D. V.; Chertovich, A. V.; Rudyak, V. Yu.

    2016-10-01

    Phthalonitrile compounds with Si bridges were recently suggested for producing thermosetting polymer composites with reduced Tg and thus expanded processing range. The detailed experimental investigation of this class of phthalonitriles is still difficult due to development time and costs limitations and the need to take into account the structural changes during the crosslinking. In this paper, we try to overcome these limitations using computer simulations. We performed full-atomistic molecular dynamics simulations of various phthalonitrile compounds to understand the influence of molecular structure on the bulk glass temperature Tg. Two molecular properties affect Tg of the resulting bulk compound: the size of the residue and the length of the Si bridge. The larger residues lead to higher Tgs, while compounds with longer Si bridges have lower Tgs. We have also studied relaxation mechanisms involved in the classification of the samples. Two different factors influence the relaxation mechanisms: energetic, which is provided by the rigidity of molecules, and entropic, connected with the available volume of the conformational space of the monomer.

  12. Food Choices and Consequences for the Nutritional Status: Insights into Nutrition Transition in an Hospital Community

    PubMed Central

    Piple, Jitendra; Gora, Ranjeet; Purbiya, Pragati; Puliyel, Ashish; Chugh, Parul; Bahl, Pinky; Puliyel, Jacob

    2015-01-01

    Introduction Although economic development is generally accompanied by improvements in the overall nutritional status of the country’s population the ‘nutritional transition’ often involves a shift to high energy diets and less exercise with negative consequences. This pilot study was done to examine if education of parents operates at the household level to influence dietary choices and the nutritional status of children in a small community of hospital workers. Material and Methods 3 groups of persons with varying skill and education levels participated. Weighed food logs were used in all households to calculate ‘adult equivalent’ per-capita-consumption. Nutrients were calculated using nutrients calculator software. BMI was used to classify children as underweight, normal weight and overweight. Results 128 individuals participated from 30 families included 47 children. 10 children (21%) were underweight, 29 (62%) were normal and 8 (17%) were overweight. Energy consumption was highest in families with overweight children 2692 +/-502 compared to 2259 +/-359 in families with normal weight and 2031+/-354 in the family of underweight children. These differences were statistically significant. 42% underweight children belonged to Class 1 at the lowest skill level and there were no overweight children in this group. Most of the overweight children belonged to Class 2. In Class 3 there were no underweight children and the majority was normal weight children. Conclusion Underweight children came from the poorer households. Per capita intake of the family as a whole correlated well with BMI in the children. There was increased obesity in middle income families belonging to Class 2—probably in families who move up the scale from deprivation. Nutritional status in children correlated mostly with maternal education status. PMID:26559817

  13. MICROSCOPIC DYNAMICS AT THE GLASS TRANSITION: INSIGHTS FROM SOFT COLLOIDAL DISPERSIONS

    SciTech Connect

    Romeo, G.; Imperiali, L.; Acierno, D.; Nieves, A. F.; Weitz, D. A.

    2008-08-28

    We investigate the microscopic dynamics of compressible colloidal particles as function of concentration through dynamic light scattering and confocal microscopy experiments. In analogy with hard sphere (HS) colloidal systems, we find that the particles display liquid, supercooled liquid or glassy dynamics, depending on volume fraction. In the present case, however caging effects are observed for particle volume fractions higher than one, i.e. when the particles are compressed. We find that heterogeneous dynamics, described by a non Gaussian distribution of the displacements, play a major role in the supercooled liquid in proximity of the relaxation time.

  14. Unique insights into the intestinal absorption, transit, and subsequent biodistribution of polymer-derived microspheres

    PubMed Central

    Reineke, Joshua J.; Cho, Daniel Y.; Dingle, Yu-Ting; Morello, A. Peter; Jacob, Jules; Thanos, Christopher G.; Mathiowitz, Edith

    2013-01-01

    Polymeric microspheres (MSs) have received attention for their potential to improve the delivery of drugs with poor oral bioavailability. Although MSs can be absorbed into the absorptive epithelium of the small intestine, little is known about the physiologic mechanisms that are responsible for their cellular trafficking. In these experiments, nonbiodegradable polystyrene MSs (diameter range: 500 nm to 5 µm) were delivered locally to the jejunum or ileum or by oral administration to young male rats. Following administration, MSs were taken up rapidly (≤5 min) by the small intestine and were detected by transmission electron microscopy and confocal laser scanning microscopy. Gel permeation chromatography confirmed that polymer was present in all tissue samples, including the brain. These results confirm that MSs (diameter range: 500 nm to 5 µm) were absorbed by the small intestine and distributed throughout the rat. After delivering MSs to the jejunum or ileum, high concentrations of polystyrene were detected in the liver, kidneys, and lungs. The pharmacologic inhibitors chlorpromazine, phorbol 12-myristate 13-acetate, and cytochalasin D caused a reduction in the total number of MSs absorbed in the jejunum and ileum, demonstrating that nonphagocytic processes (including endocytosis) direct the uptake of MSs in the small intestine. These results challenge the convention that phagocytic cells such as the microfold cells solely facilitate MS absorption in the small intestine. PMID:23922388

  15. Unique insights into the intestinal absorption, transit, and subsequent biodistribution of polymer-derived microspheres.

    PubMed

    Reineke, Joshua J; Cho, Daniel Y; Dingle, Yu-Ting; Morello, A Peter; Jacob, Jules; Thanos, Christopher G; Mathiowitz, Edith

    2013-08-20

    Polymeric microspheres (MSs) have received attention for their potential to improve the delivery of drugs with poor oral bioavailability. Although MSs can be absorbed into the absorptive epithelium of the small intestine, little is known about the physiologic mechanisms that are responsible for their cellular trafficking. In these experiments, nonbiodegradable polystyrene MSs (diameter range: 500 nm to 5 µm) were delivered locally to the jejunum or ileum or by oral administration to young male rats. Following administration, MSs were taken up rapidly (≤ 5 min) by the small intestine and were detected by transmission electron microscopy and confocal laser scanning microscopy. Gel permeation chromatography confirmed that polymer was present in all tissue samples, including the brain. These results confirm that MSs (diameter range: 500 nm to 5 µm) were absorbed by the small intestine and distributed throughout the rat. After delivering MSs to the jejunum or ileum, high concentrations of polystyrene were detected in the liver, kidneys, and lungs. The pharmacologic inhibitors chlorpromazine, phorbol 12-myristate 13-acetate, and cytochalasin D caused a reduction in the total number of MSs absorbed in the jejunum and ileum, demonstrating that nonphagocytic processes (including endocytosis) direct the uptake of MSs in the small intestine. These results challenge the convention that phagocytic cells such as the microfold cells solely facilitate MS absorption in the small intestine. PMID:23922388

  16. Spin symmetry transitions make DNA strands separate. New insight into the mechanism of transcription.

    PubMed

    Tulub, Alexander A; Stefanov, Vassily E

    2015-01-01

    The DFT:B3LYP (6-31G** basis set) method, including the hyperfine and spin-orbit couplings (HFC and SOC, respectively), is used to study the separation of two complementary trinucleotide sequences, (dC-dG-dA)-(dG-dC-dT), upon the action of two Mg(2+) cofactors (a simplified model). The computations reveal a crossing of the singlet (S) potential energy surface by the triplet (T) surface at two distinct points. Within the crossing region the T curve lies below the S curve. Adhering to the concept of the minimal energy path, one can assume that the T path is more favorable compared to that of the S path. The T path is not simple; it consists of two, T+ and T-, curves initially separated by the HFC and SOC. On reaching the second crossing point, both curves merge into the T0 state, which facilitates the T → S transfer. Totally, the process of the two trinucleotide separation (the first step of transcription) appears as the S → T → S symmetry conversion. PMID:26656910

  17. Pivotal Transitions - Historical and Today

    NASA Astrophysics Data System (ADS)

    Hurley, M.

    2008-08-01

    The goal of this paper is to enable readers to better "design" successful transitions that move Science and Technology or Research and Development (S&T/R&D) technologies and systems into operational capabilities for users. Transitions from S&T/R&D into acquisition and operations are challenging and critical to providing capab ilities to end users. Two historical examples, the Global Positioning System (GPS) and the Disaster Monitoring Constellation (DMC), are explored. Two current examples are also explored, including one from Operationally Responsive Space (ORS) which is in th e early stages of transition. While transitions are necessary, transition periods are inherently challenging and dynamically changing situations. These situations must be carefully managed and led in order to succeed. Characteristics, approaches, and incentives that foster effective transitions are discussed. Understanding the transition process and the communities involved allows one to maximize the chance of successfully moving an S&T/R&D development into an operational capability supporting end users.

  18. Five Kepler target stars that show multiple transiting exoplanet candidates

    SciTech Connect

    Steffen, Jason H.; Batalha, Natalie M.; Borucki, William J.; Buchhave, Lars A.; Caldwell, Douglas A.; Cochran, William D.; Endl, Michael; Fabrycky, Daniel C.; Fressin, Francois; Ford, Eric B.; Fortney, Jonathan J.; /UC, Santa Cruz, Phys. Dept. /NASA, Ames

    2010-06-01

    We present and discuss five candidate exoplanetary systems identified with the Kepler spacecraft. These five systems show transits from multiple exoplanet candidates. Should these objects prove to be planetary in nature, then these five systems open new opportunities for the field of exoplanets and provide new insights into the formation and dynamical evolution of planetary systems. We discuss the methods used to identify multiple transiting objects from the Kepler photometry as well as the false-positive rejection methods that have been applied to these data. One system shows transits from three distinct objects while the remaining four systems show transits from two objects. Three systems have planet candidates that are near mean motion commensurabilities - two near 2:1 and one just outside 5:2. We discuss the implications that multitransiting systems have on the distribution of orbital inclinations in planetary systems, and hence their dynamical histories; as well as their likely masses and chemical compositions. A Monte Carlo study indicates that, with additional data, most of these systems should exhibit detectable transit timing variations (TTV) due to gravitational interactions - though none are apparent in these data. We also discuss new challenges that arise in TTV analyses due to the presence of more than two planets in a system.

  19. A crystallographic approach to structural transitions in icosahedral viruses.

    PubMed

    Indelicato, Giuliana; Cermelli, Paolo; Salthouse, David G; Racca, Simone; Zanzotto, Giovanni; Twarock, Reidun

    2012-04-01

    Viruses with icosahedral capsids, which form the largest class of all viruses and contain a number of important human pathogens, can be modelled via suitable icosahedrally invariant finite subsets of icosahedral 3D quasicrystals. We combine concepts from the theory of 3D quasicrystals, and from the theory of structural phase transformations in crystalline solids, to give a framework for the study of the structural transitions occurring in icosahedral viral capsids during maturation or infection. As 3D quasicrystals are in a one-to-one correspondence with suitable subsets of 6D icosahedral Bravais lattices, we study systematically the 6D-analogs of the classical Bain deformations in 3D, characterized by minimal symmetry loss at intermediate configurations, and use this information to infer putative viral-capsid transition paths in 3D via the cut-and-project method used for the construction of quasicrystals. We apply our approach to the Cowpea Chlorotic Mottle virus (CCMV) and show that the putative transition path between the experimentally observed initial and final CCMV structures is most likely to preserve one threefold axis. Our procedure suggests a general method for the investigation and prediction of symmetry constraints on the capsids of icosahedral viruses during structural transitions, and thus provides insights into the mechanisms underlying structural transitions of these pathogens. PMID:21611828

  20. 309 Building transition plan

    SciTech Connect

    Graves, C.E.

    1994-08-31

    The preparation for decontamination and decommissioning (transition) of the 309 Building is projected to be completed by the end of the fiscal year (FY) 1998. The major stabilization and decontamination efforts include the Plutonium Recycle Test Reactor (PRTR), fuel storage and transfer pits, Transfer Waste (TW) tanks and the Ion Exchange Vaults. In addition to stabilizing contaminated areas, equipment, components, records, waste products, etc., will be dispositioned. All nonessential systems, i.e., heating, ventilation, and air conditioning (HVAC), electrical, monitoring, fluids, etc., will be shut down and drained/de-energized. This will allow securing of the process, laboratory, and office areas of the facility. After that, the facility will be operated at a level commensurate with its surveillance needs while awaiting D&D. The implementation costs for FY 1995 through FY 1998 for the transition activities are estimated to be $1,070K, $2,115K, $2,939K, and $4,762K, respectively. Costs include an assumed company overhead of 20% and a 30% out year contingency.

  1. Planet Demographics from Transits

    NASA Astrophysics Data System (ADS)

    Howard, Andrew

    2015-08-01

    From the demographics of planets detected by the Kepler mission, we have learned that there exists approximately one planet per star for planets larger than Earth orbiting inside of 1 AU. We have also learned the relative occurrence of these planets as a function of their orbital periods, sizes, and host star masses and metallicities. In this talk I will review the key statistical findings that the planet size distribution peaks in the range 1-3 times Earth-size, the orbital period distribution is characterized by a power-law cut off at short periods, small planets are more prevalent around small stars, and that approximately 20% of Sun-like stars hosts a planet 1-2 times Earth-size in a habitable zone. Looking forward, I will describe analysis of photometry from the K2 mission that is yielding initial planet discoveries and offering the opportunity to measure planet occurrence in widely separated regions of the galaxy. Finally, I will also discuss recent techniques to discover transiting planets in space-based photometry and to infer planet population properties from the ensemble of detected and non-detected transit signals.

  2. The interplay between galaxy transition and molecular gas in the next generation of radio facilities

    NASA Astrophysics Data System (ADS)

    Alatalo, Katherine A.; SPOGS Team

    2016-01-01

    The well-known galaxy color bimodality suggests that the paths which galaxies transition from blue, gas-rich spirals to red, gas-poor early-type (elliptical and lenticular) galaxies must be traveled rapidly to explain the dearth of intermediate stage objects. Studying the relationship between the interstellar fuel out of which stars form, and the global changes that galaxies undergo provides a window not only into the paths of transitions that galaxies take, but also how the transition mechanisms can feed back upon the relationship between molecular gas and star formation. I will discuss our results from z=0 transitioning galaxy surveys from CARMA and IRAM, and the ways in which next generation radio telescopes will not only provide detailed insights into the relationship between gas and transition at z=0, but also how this relationship evolves with redshift.

  3. Universal Features of the Fluid to Solid Transition for Attractive Colloidal Particles

    NASA Technical Reports Server (NTRS)

    Cipelletti, L.; Prasad, V.; Dinsmore, A.; Segre, P. N.; Weitz, D. A.; Trappe, V.

    2002-01-01

    Attractive colloidal particles can exhibit a fluid to solid phase transition if the magnitude of the attractive interaction is sufficiently large, if the volume fraction is sufficiently high, and if the applied stress is sufficiently small. The nature of this fluid to solid transition is similar for many different colloid systems, and for many different forms of interaction. The jamming phase transition captures the common features of these fluid to solid translations, by unifying the behavior as a function of the particle volume fraction, the energy of interparticle attractions, and the applied stress. This paper describes the applicability of the jamming state diagram, and highlights those regions where the fluid to solid transition is still poorly understood. It also presents new data for gelation of colloidal particles with an attractive depletion interaction, providing more insight into the origin of the fluid to solid transition.

  4. InSight Planetary Protection Status

    NASA Astrophysics Data System (ADS)

    Benardini, James; La Duc, Myron; Willis, Jason

    The NASA Discovery Program’s next mission, Interior Exploration using Seismic Investigations, Geodesy and Heat Transport (InSIght), consists of a single spacecraft that will be launched aboard an Atlas V 401 rocket from Vandenberg Air Force Base (Space Launch Complex 3E) during the March 2016 timeframe. The overarching mission goal is to illuminate the fundamentals of formation and evolution of terrestrial planets by investigating the interior structure and processes of Mars. The flight system consists of a heritage cruise stage, aeroshell (heatshield and backshell), and Lander from the 2008 Phoenix mission. Included in the lander payload are various cameras, a seismometer, an auxiliary sensor suite to measure wind, temperature, and pressure, and a mole to penetrate the regolith (<5 meters) and assess the subsurface geothermal gradient of Mars. Being a Mars lander mission without life detection instruments, InSight has been designated a PP Category Iva mission. As such, planetary protection bioburden requirements apply which require microbial reduction procedures and biological burden reporting. The InSight project is current with required PP documentation, having completed an approved Planetary Protection Plan, Subsidiary PP Plans, and a PP Implementation Plan. The InSight mission’s early planetary protection campaign has commenced, coinciding with the fabrication and assembly of payload and flight system hardware and the baseline analysis of existing flight spares. A report on the status of InSight PP activities will be provided.

  5. Is Insight Always the Same? A Protocol Analysis of Insight in Compound Remote Associate Problems

    ERIC Educational Resources Information Center

    Cranford, Edward A.; Moss, Jarrod

    2012-01-01

    Compound Remote Associate (CRA) problems have been used to investigate insight problem solving using both behavioral and neuroimaging techniques. However, it is unclear to what extent CRA problems exhibit characteristics of insight such as impasses and restructuring. CRA problem-solving characteristics were examined in a study in which…

  6. Gait transition cost in humans.

    PubMed

    Usherwood, James R; Bertram, John E A

    2003-11-01

    The energetics of locomotion depend largely on speed, gait and body size. Gait selection for a given speed appears partly, but perhaps not wholly, related to metabolic cost. One cost normally omitted from considerations of locomotion efficiency is the metabolic cost of the transition between gaits. We present the first direct assessment of the metabolic cost for the walk-run/run-walk transition in humans. The average increase in metabolic cost for a step involving a transition is 1.75 times that of a mean non-transition step at a speed where metabolic power requirements are identical for walking and running. Despite this substantial increase in cost for the transition step, the metabolic cost of gait transition is unlikely to have a strong bearing on the process of gait selection as the cost of using a metabolically inappropriate gait, even for only a few steps, will dominate. PMID:14564525

  7. Symmetry in DIET phase transitions

    NASA Astrophysics Data System (ADS)

    Zhang, J. P.; Marks, L. D.

    1989-11-01

    Analysis of the route of the phase transitions in transition metal oxides driven by DIET of oxygen from the surfaces observed by high resolution electron microscopy indicates that there is a symmetry selection rule. The phase transitions are to a structure with a higher point group symmetry where the new phase with a lower oxygen content is either one with a supergroup symmetry with respect to the original phase, or is an amorphous intermediary. The final phase has the highest symmetry and is also a metallic conductor. If a possible lower oxygen content phase does not have the correct supergroup symmetry, it is not formed. It is also found that the point group is conserved during the phase transition if the oxide belongs to the highest groups O h or D 6h. This symmetry selection rule can therefore be used to predict the route of the phase transition. The symmetry rule operates when the phase transition is diffusional.

  8. Maritime in transit care.

    PubMed

    Bott, G; Barnard, J; Prior, K

    2015-01-01

    Operation GRITROCK saw the first operational deployment of the Maritime In Transit Care team from the Role 2 (Enhanced) (R2(E)) Medical Treatment Facility, which is able to provide Damage Control Surgery and the limited holding of patients, situated on board RFA ARGUS. Whilst the Medical Emergency Response Team demonstrated the capability of advanced military Pre-Hospital Emergency Care (PHEC) on Op HERRICK, the need to provide a similar high level of care on contingency operations was recognised. Op GRITROCK allowed for the continued exploration of a maritime capability from an established R2(E) platform whilst providing medical evacuation capability for a significant population at risk distributed over a large Joint Operation Area. Although the patient load during the operation was low, key lessons were learnt and opportunities identified to further develop the newly recognised sub-speciality of PHEC, both medically and logistically, and these will be discussed in this article. PMID:26867404

  9. Hybrid Electric Transit Bus

    NASA Technical Reports Server (NTRS)

    Viterna, Larry A.

    1997-01-01

    A government, industry, and university cooperative is developing an advanced hybrid electric city transit bus. Goals of this effort include doubling the fuel economy compared to current buses and reducing emissions to one-tenth of current EPA standards. Unique aspects of the vehicle's power system include the use of ultra-capacitors as an energy storage system, and a planned natural gas fueled turbogenerator developed from a small jet engine. Power from both the generator and energy storage system is provided to a variable speed electric motor attached to the rear axle. At over 15000 kg gross weight, this is the largest vehicle of its kind ever built using ultra-capacitor energy storage. This paper describes the overall power system architecture, the evolution of the control strategy, and its performance over industry standard drive cycles.

  10. Nonadiabatic transition path sampling

    NASA Astrophysics Data System (ADS)

    Sherman, M. C.; Corcelli, S. A.

    2016-07-01

    Fewest-switches surface hopping (FSSH) is combined with transition path sampling (TPS) to produce a new method called nonadiabatic path sampling (NAPS). The NAPS method is validated on a model electron transfer system coupled to a Langevin bath. Numerically exact rate constants are computed using the reactive flux (RF) method over a broad range of solvent frictions that span from the energy diffusion (low friction) regime to the spatial diffusion (high friction) regime. The NAPS method is shown to quantitatively reproduce the RF benchmark rate constants over the full range of solvent friction. Integrating FSSH within the TPS framework expands the applicability of both approaches and creates a new method that will be helpful in determining detailed mechanisms for nonadiabatic reactions in the condensed-phase.

  11. Transference, Insight, and the Course of Time-Limited Therapy.

    ERIC Educational Resources Information Center

    Gelso, Charles J.; Kivlighan, Dennis M.; Wine, Bruce; Jones, Alissa; Friedman, Suzanne C.

    1997-01-01

    Examines the interactive role of therapist-rated transference and insight in predicting both the outcome of time-limited therapy and the course of therapist-rated transference and insight. Results indicate that neither transference nor insight alone predicted outcome; the interaction of transference and emotional insight influenced client- and…

  12. Ecological and evolutionary insights from species invasions.

    PubMed

    Sax, Dov F; Stachowicz, John J; Brown, James H; Bruno, John F; Dawson, Michael N; Gaines, Steven D; Grosberg, Richard K; Hastings, Alan; Holt, Robert D; Mayfield, Margaret M; O'Connor, Mary I; Rice, William R

    2007-09-01

    Species invasions provide numerous unplanned and frequently, but imperfectly, replicated experiments that can be used to better understand the natural world. Classic studies by Darwin, Grinnell, Elton and others on these species-invasion experiments provided invaluable insights for ecology and evolutionary biology. Recent studies of invasions have resulted in additional insights, six of which we discuss here; these insights highlight the utility of using exotic species as 'model organisms'. We also discuss a nascent hypothesis that might provide a more general, predictive understanding of invasions and community assembly. Finally, we emphasize how the study of invasions can help to inform our understanding of applied problems, such as extinction, ecosystem function and the response of species to climate change.

  13. Transit satellite system timing capabilities

    NASA Technical Reports Server (NTRS)

    Finsod, T. D.

    1978-01-01

    Current time transfer capabilities of the Transit Satellite System are reviewed. Potential improvements in the changes in equipment and operational procedures using operational satellites are discussed.

  14. Transit administration and planning research

    SciTech Connect

    de Corla-Souza; Gupta.

    1989-01-01

    The 10 papers in the report deal with the following areas: Evaluation of demand-management strategies for Toledo's year 2010 transportation plan; Accommodating deaf and hard-of-hearing persons on public transportation systems in Massachusetts; Quick approach to compare highway and bus transit alternatives using the arterial analysis package; Panel survey approach to measuring transit route service elasticity of demand; UMTA and major investments: evaluation process and results; Using early performance to project transit route ridership: comparison of methods; Institutional requirements for competition: labor issues; Updating ride checks with multiple point checks; Producing section 15 service-consumed data: challenge for large transit; Parkrose targeted marketing campaign pass-incentive program.

  15. Quantum phase transition in space

    SciTech Connect

    Damski, Bogdan; Zurek, Wojciech H

    2008-01-01

    A quantum phase transition between the symmetric (polar) phase and the phase with broken symmetry can be induced in a ferromagnetic spin-1 Bose-Einstein condensate in space (rather than in time). We consider such a phase transition and show that the transition region in the vicinity of the critical point exhibits scalings that reflect a compromise between the rate at which the transition is imposed (i.e., the gradient of the control parameter) and the scaling of the divergent healing length in the critical region. Our results suggest a method for the direct measurement of the scaling exponent {nu}.

  16. Novel insights into mitotic chromosome condensation

    PubMed Central

    Piskadlo, Ewa; Oliveira, Raquel A.

    2016-01-01

    The fidelity of mitosis is essential for life, and successful completion of this process relies on drastic changes in chromosome organization at the onset of nuclear division. The mechanisms that govern chromosome compaction at every cell division cycle are still far from full comprehension, yet recent studies provide novel insights into this problem, challenging classical views on mitotic chromosome assembly. Here, we briefly introduce various models for chromosome assembly and known factors involved in the condensation process (e.g. condensin complexes and topoisomerase II). We will then focus on a few selected studies that have recently brought novel insights into the mysterious way chromosomes are condensed during nuclear division. PMID:27508072

  17. Gestures and insight in advanced mathematical thinking

    NASA Astrophysics Data System (ADS)

    Yoon, Caroline; Thomas, Michael O. J.; Dreyfus, Tommy

    2011-10-01

    What role do gestures play in advanced mathematical thinking? We argue that the role of gestures goes beyond merely communicating thought and supporting understanding - in some cases, gestures can help generate new mathematical insights. Gestures feature prominently in a case study of two participants working on a sequence of calculus activities. One participant uses gestures to clarify the relationships between a function, its derivative and its antiderivative. We show how these gestures help create a virtual mathematical construct, which in turn leads to a new problem-solving strategy. These results suggest that gestures are a productive, but potentially undertapped resource for generating new insights in advanced levels of mathematics.

  18. Phase-Transition Mastering of High-Density Optical Media

    NASA Astrophysics Data System (ADS)

    Meinders, Erwin R.; Rastogi, Ruchi; van der Veer, Mark; Peeters, Patrick; El Majdoubi, Hamid; Bulle, Herman; Millet, Antoine; Bruls, Dominique

    2007-06-01

    A new phase-transition mastering (PTM) process was developed for Blu-ray Disc read-only memory (BD-ROM) mastering. Results obtained with both a 266 and 405 nm laser beam recorder (LBR) are discussed in this paper. The feasibility of BD-ROM mastering was successfully demonstrated on both LBRs. With the insight that 25 Gbytes BD-ROM can be mastered with a 405 nm wavelength LBR, the availability of the 266 nm wavelength LBR opened the route to explore PTM of near-field data densities. First experiments indicate that the PTM process is also suitable for mastering data densities beyond 25 Gbytes data density.

  19. Transference in the rat man case: the transference in transition.

    PubMed

    Muslin, H L

    1979-01-01

    This study has concentrated on the use of the transference concept in the Rat Man case as a method for revealing repressed memories and to gain conviction about these repressed memories. In this treatment-transference model, transference interpretations focusing on the analyst are not germane, since the transferences are merely the vehicle by which memories are uncovered. Thus, Freud's transference work in 1907 revealed a transitional phase of his clinical activity soon to be supplanted by later insights into the curative aspects of transference analysis.

  20. Distinguishing 6 Population Subgroups by Timing and Characteristics of the Menopausal Transition

    PubMed Central

    Huang, Xiaobi; Harlow, Siobán D.; Elliott, Michael R.

    2012-01-01

    Changes in women’s menstrual bleeding patterns precede the onset of menopause. In this paper, the authors identify population subgroups based on menstrual characteristics of the menopausal transition experience. Using the TREMIN data set (1943–1979), the authors apply a Bayesian change-point model with 8 parameters for each woman that summarize change in menstrual bleeding patterns during the menopausal transition. The authors then use estimates from this model to classify menstrual patterns into subgroups using a K-medoids algorithm. They identify 6 subgroups of women whose transition experience can be distinguished by age at onset, variability of the menstrual cycle, and duration of the early transition. These results suggest that for most women, mean and variance change points are well aligned with proposed bleeding markers of the menopausal transition, but for some women they are not clearly associated. Increasing understanding of population differences in the transition experience may lead to new insights into ovarian aging. Because of age inclusion criteria, most longitudinal studies of the menopausal transition probably include only a subset of the 6 subgroups of women identified in this paper, suggesting a potential bias in the understanding of both the menopausal transition and the linkage between the transition and chronic disease. PMID:22138039

  1. Essentials of Transition Planning. Brookes Transition to Adulthood Series

    ERIC Educational Resources Information Center

    Wehman, Paul

    2011-01-01

    For young people with disabilities, crossing the bridge to adulthood will be empowering instead of intimidating--when their support teams know the essentials of effective transition planning. Now all the fundamentals of well-crafted transition plans are collected in one concise quick-guide, straight from one of the top authorities on helping young…

  2. Connecticut Transit (CTTRANSIT) Fuel Cell Transit Bus: Preliminary Evaluation Results

    SciTech Connect

    Chandler, K.; Eudy, L.

    2008-10-01

    This report provides preliminary results from a National Renewable Energy Laboratory evaluation of a protoptye fuel cell transit bus operating at Connecticut Transit in Hartford. Included are descriptions of the planned fuel cell bus demonstration and equipment; early results and agency experience are also provided.

  3. The physical origins of transit time measurements for rapid, single cell mechanotyping.

    PubMed

    Nyberg, Kendra D; Scott, Michael B; Bruce, Samuel L; Gopinath, Ajay B; Bikos, Dimitri; Mason, Thomas G; Kim, Jin Woong; Choi, Hong Sung; Rowat, Amy C

    2016-08-16

    The mechanical phenotype or 'mechanotype' of cells is emerging as a potential biomarker for cell types ranging from pluripotent stem cells to cancer cells. Using a microfluidic device, cell mechanotype can be rapidly analyzed by measuring the time required for cells to deform as they flow through constricted channels. While cells typically exhibit deformation timescales, or transit times, on the order of milliseconds to tens of seconds, transit times can span several orders of magnitude and vary from day to day within a population of single cells; this makes it challenging to characterize different cell samples based on transit time data. Here we investigate how variability in transit time measurements depends on both experimental factors and heterogeneity in physical properties across a population of single cells. We find that simultaneous transit events that occur across neighboring constrictions can alter transit time, but only significantly when more than 65% of channels in the parallel array are occluded. Variability in transit time measurements is also affected by the age of the device following plasma treatment, which could be attributed to changes in channel surface properties. We additionally investigate the role of variability in cell physical properties. Transit time depends on cell size; by binning transit time data for cells of similar diameters, we reduce measurement variability by 20%. To gain further insight into the effects of cell-to-cell differences in physical properties, we fabricate a panel of gel particles and oil droplets with tunable mechanical properties. We demonstrate that particles with homogeneous composition exhibit a marked reduction in transit time variability, suggesting that the width of transit time distributions reflects the degree of heterogeneity in subcellular structure and mechanical properties within a cell population. Our results also provide fundamental insight into the physical underpinnings of transit measurements

  4. A new interpretation of the Besnus transition in monoclinic pyrrhotite

    NASA Astrophysics Data System (ADS)

    Gehring, Andreas

    2016-04-01

    Non-stoichiometric monoclinic 4C pyrrhotite (ideal formula: Fe7S8) is a major magnetic remanence carrier in the Earth's crust and in extraterrestrial materials. Because of its low-temperature magnetic transition around 30 K also known as Besnus transition, this mineral phase is easily detectable in natural samples. Considering the rock magnetic literature, an intrinsic origin of the Besnus transition similar to that of the Verwey transition has generally been assumed. Although the physical properties of pyrrhotite have intensively been studied, the mechanism behind the pronounced change in magnetization at the low-temperature transition is still debated. To address this question we performed magnetization experiments on a natural pyrrhotite crystal (Fe6.6S8) that consists of an epitaxial intergrowth of a commensurate 4C and an incommensurate 5C* superstructure that are different in their defect structure (1,2). The occurrence of two monoclinic superstructures detected by X-ray diffractometry is magnetically confirmed by symmetric inflection points in hysteresis measurements above the transition at about 30 K. The disappearance of the inflection points and the associated change of the hysteresis parameters indicate that the two superstructures become strongly coupled to form a unitary magnetic anisotropy system at the transition. From this it follows that the Besnus transition in monoclinic pyrrhotite is an extrinsic magnetic phenomenon with respect to the 4C superstructure and therefore the physics behind it is in fact different from that of the well-known Verwey transition. Finally, this novel interpretation explains the rock magnetic data for the low-temperature transition that has been reported for monoclinic pyrrhotite. It will also provide deeper understanding of magnetism in monoclinic pyrrhotite, which in turn will enable a more profound insight to the magnetization properties of the Earth's crust. 1.) Charilaou, M., Kind, J., Koulialias, D., Weidler, P

  5. Graphical representation for thermal equilibrium when transition temperatures are present

    NASA Astrophysics Data System (ADS)

    Rojas, Roberto

    2016-01-01

    We propose the use of graphics in order to get a quick insight of the thermal equilibrium of two bodies, when a transition temperature is present in the interval between both initial temperatures. We have found two convenient variables in order to represent the mathematical condition for the partial or complete transition of each component. In mixing hot water and cold ice, the proposed graphical representation exhibits straight lines separating four regions corresponding to different equilibrium states, going from one containing just ice up to the other containing just water, and two states in between with increased ice or increased water. This graphical representation helps to avoid typical student errors in learning elementary physics.

  6. Quantum information-geometry of dissipative quantum phase transitions.

    PubMed

    Banchi, Leonardo; Giorda, Paolo; Zanardi, Paolo

    2014-02-01

    A general framework for analyzing the recently discovered phase transitions in the steady state of dissipation-driven open quantum systems is still lacking. To fill this gap, we extend the so-called fidelity approach to quantum phase transitions to open systems whose steady state is a Gaussian fermionic state. We endow the manifold of correlation matrices of steady states with a metric tensor g measuring the distinguishability distance between solutions corresponding to a different set of control parameters. The phase diagram can then be mapped out in terms of the scaling behavior of g and connections with the Liouvillean gap and the model correlation functions unveiled. We argue that the fidelity approach, thanks to its differential-geometric and information-theoretic nature, provides insights into dissipative quantum critical phenomena as well as a general and powerful strategy to explore them. PMID:25353417

  7. Quantum information-geometry of dissipative quantum phase transitions.

    PubMed

    Banchi, Leonardo; Giorda, Paolo; Zanardi, Paolo

    2014-02-01

    A general framework for analyzing the recently discovered phase transitions in the steady state of dissipation-driven open quantum systems is still lacking. To fill this gap, we extend the so-called fidelity approach to quantum phase transitions to open systems whose steady state is a Gaussian fermionic state. We endow the manifold of correlation matrices of steady states with a metric tensor g measuring the distinguishability distance between solutions corresponding to a different set of control parameters. The phase diagram can then be mapped out in terms of the scaling behavior of g and connections with the Liouvillean gap and the model correlation functions unveiled. We argue that the fidelity approach, thanks to its differential-geometric and information-theoretic nature, provides insights into dissipative quantum critical phenomena as well as a general and powerful strategy to explore them.

  8. Noise-induced transition in human reaction times

    NASA Astrophysics Data System (ADS)

    Medina, José M.; Díaz, José A.

    2016-09-01

    The human reaction/response time can be defined as the time elapsed from the onset of stimulus presentation until a response occurs in many sensory and cognitive processes. A reaction time model based on Piéron’s law is investigated. The model shows a noise-induced transition in the moments of reaction time distributions due to the presence of strong additive noise. The model also demonstrates that reaction times do not follow fluctuation scaling between the mean and the variance but follow a generalized version between the skewness and the kurtosis. The results indicate that noise-induced transitions in the moments govern fluctuations in sensory-motor transformations and open an insight into the macroscopic effects of noise in human perception and action. The conditions that lead to extreme reaction times are discussed based on the transfer of information in neurons.

  9. Light Scattering in Exoplanet Transits

    NASA Astrophysics Data System (ADS)

    Robinson, Tyler D.; Fortney, Jonathan J.

    2016-10-01

    Transit spectroscopy is currently the leading technique for studying exoplanet atmospheric composition, and has led to the detection of molecular species, clouds, and/or hazes for numerous worlds outside the Solar System. The field of exoplanet transit spectroscopy will be revolutionized with the anticipated launch of NASA's James Webb Space Telescope (JWST) in 2018. Over the course of the design five year mission for JWST, the observatory is expected to provide in-depth observations of many tens of transiting exoplanets, including some worlds in the poorly understood 2–4 Earth-mass regime. As the quality of transit spectrum observations continues to improve, so should models of exoplanet transits. Thus, certain processes initially thought to be of second-order importance should be revisited and possibly added to modeling tools. For example, atmospheric refraction, which was commonly omitted from early transit spectrum models, has recently been shown to be of critical importance in some terrestrial exoplanet transits. Beyond refraction, another process that has seen little study with regards to exoplanet transits is light multiple scattering. In most cases, scattering opacity in exoplanet transits has been treated as equivalent to absorption opacity. However, this equivalence cannot always hold, such as in the case of a strongly forward scattering, weakly absorbing aerosol. In this presentation, we outline a theory of exoplanet transit spectroscopy that spans the geometric limit (used in most modern models) to a fully multiple scattering approach. We discuss a new technique for improving model efficiency that effectively separates photon paths, which tend to vary slowly in wavelength, from photon absorption, which can vary rapidly in wavelength. Using this newly developed approach, we explore situations where cloud or haze scattering may be important to JWST observations of gas giants, and comment on the conditions necessary for scattering to become a major

  10. Detection by Transit Photometry

    NASA Technical Reports Server (NTRS)

    Borucki, William J.; Koch, David G.; Jenkins, Jon M.; DeVincenzi, D. (Technical Monitor)

    2002-01-01

    A periodic sequence of planetary transits provides a valid detection of an orbiting planet and provides the relative size of the planet and its orbital period. Ancillary measurements of the stellar spectrum and the variations of the star's radial velocity or position combined with stellar models allow the absolute size of the planet and its mass to be obtained. The results of this approach have already shown that the planet orbiting HD209458 has only 70% of the mass of Jupiter, but is nearly 50% larger in radius. Based on models of planetary structure, these results imply that the planet must have spent most of its lifetime so close to the star that it has not been able to cool and contract as have the giant planets in our Solar System. Thus its density is much less than Jupiter and Saturn and is actually less than that of water; i.e., about 0.4 gr/cu cm. If more sensitive measurements of the light curve of stars with closely orbiting planets can be made that provide the varying amplitude of the light reflected by the planet at various phases in its orbit, then characteristics of the planetary atmosphere can be obtained. Potentially, these data can identify major molecular species present in the atmosphere and tell us if clouds are present and yield the phase function of the aerosols. Although such detail cannot be obtained for Earth-size planets because their signal amplitudes are too small, it is possible to get data critical to the determination of the structure of extrasolar planetary systems. In particular, the size distributions and their orbital distributions can be measured by the transit photometry missions now in development. The COROT mission should be able to find large terrestrial planets in short-period orbits while the more ambitious Kepler and Eddington missions should be able to detect planets even smaller than the Earth and at orbital distances that place them in the habitable zone of their stars.

  11. Evaluating outpatient transition clinics: a mixed-methods study protocol

    PubMed Central

    Sattoe, Jane N T; Peeters, Mariëlle A C; Hilberink, Sander R; Ista, Erwin; van Staa, AnneLoes

    2016-01-01

    Introduction To support young people in their transition to adulthood and transfer to adult care, a number of interventions have been developed. One particularly important intervention is the transition clinic (TC), where paediatric and adult providers collaborate. TCs are often advocated as best practices in transition care for young people with chronic conditions, but little is known about TC models and effects. The proposed study aims to gain insight into the added value of a TC compared with usual care (without a TC). Methods and analysis We propose a mixed-methods study with a retrospective controlled design consisting of semistructured interviews among healthcare professionals, observations of consultations with young people, chart reviews of young people transferred 2–4 years prior to data collection and questionnaires among the young people included in the chart reviews. Qualitative data will be analysed through thematic analysis and results will provide insights into structures and daily routines of TCs, and experienced barriers and facilitators in transitional care. Quantitatively, within-group differences on clinical outcomes and healthcare use will be studied over the four measurement moments. Subsequently, comparisons will be made between intervention and control groups on all outcomes at all measurement moments. Primary outcomes are ‘no-show after transfer’ (process outcome) and ‘experiences and satisfaction with the transfer’ (patient-reported outcome). Secondary outcomes consider clinical outcomes, healthcare usage, self-management outcomes and perceived quality of care. Ethics The Medical Ethical Committee of the Erasmus Medical Centre approved the study protocol (MEC-2014-246). Dissemination Study results will be disseminated through peer-reviewed journals and conferences. The study started in September 2014 and will continue until December 2016. The same study design will be used in a national study in 20 diabetes settings (2016

  12. Insights on the College, 2000-2001.

    ERIC Educational Resources Information Center

    Dowdle, Michael A.; Silverman, Barbara

    2001-01-01

    This document contains the 2000-2001 issues of Mt. San Antonio College's (Mt. SAC's) "Insights on the College." The first issue, "Mt. SAC Progress Report on Partnership for Excellence Goals," is a report on the self-assessment of the Partnership for Excellence (PFE) program conducted by Mt. SAC. The PFE program addresses the goal of the community…

  13. InSight Planetary Protection Status

    NASA Astrophysics Data System (ADS)

    Benardini, James; Vaishampayan, Parag; Chen, Fei; Kazarians, Gayane; Willis, Jason; Witte, Joe; Hendrickson, Ryan

    2016-07-01

    The InSight Project is a Discovery mission that consists of a single spacecraft with an overarching mission goal of illuminating the fundamentals of formation and evolution of terrestrial planets by investigating the interior structure and processes of Mars. The flight system is comprised of a 2008 Phoenix mission heritage cruise stage, aeroshell (heatshield and backshell), and lander. The lander payload contains cameras, a seismometer, a mole to penetrate the regolith (≤5 meters) to measure the geothermal gradient of Mars, and an auxiliary payload sensor suite to measure wind, temperature, and pressure. As a Mars lander mission without life detection instruments, the InSight mission has been designated PP Category IVa. Therefore, planetary protection bioburden requirements are applicable to this mission and require microbial reduction procedures and biological burden reports. Due to primary payload technical issues, InSight's 2016 launch has been delayed by NASA. The mission is currently under a re-planning phase. InSight has completed an approved Planetary Protection Plan, Subsidiary PP Plans, PP Implementation Documentation, and ~50% of the PPO verification biological assays. The flight system and additional payloads were assembled and being readied for launch at the launch site at the time of the project stand-down and has since been secured for storage. The status of the PP activities will be reported.

  14. Gaining Algorithmic Insight through Simplifying Constraints.

    ERIC Educational Resources Information Center

    Ginat, David

    2002-01-01

    Discusses algorithmic problem solving in computer science education, particularly algorithmic insight, and focuses on the relevance and effectiveness of the heuristic simplifying constraints which involves simplification of a given problem to a problem in which constraints are imposed on the input data. Presents three examples involving…

  15. Cognitive Psychology--An Educational Insight

    ERIC Educational Resources Information Center

    Muirhead, Brent

    2007-01-01

    Cognitive psychology offers relevant insights into improving the teaching and learning process. The author has selected ten questions from a graduate class in cognition and learning taken at The Teachers College, Columbia University. The questions will be used to examine the most effective ways to learn and recall information.

  16. Development and Testing of "Math Insight" Software

    ERIC Educational Resources Information Center

    Zucker, Andrew A.

    2006-01-01

    Computers running appropriate software hold great promise for teaching and learning mathematics. To this end, SRI International developed an integrated, computer-based problem solving environment called "Math Insight" that included interactive tools, such as a spreadsheet and dynamic geometric sketches, and professionally produced videos used to…

  17. Factorising a Quadratic Expression with Geometric Insights

    ERIC Educational Resources Information Center

    Joarder, Anwar H.

    2015-01-01

    An algorithm is presented for factorising a quadratic expression to facilitate instruction and learning. It appeals to elementary geometry which may provide better insights to some students or teachers. There have been many methods for factorising a quadratic expression described in school text books. However, students often seem to struggle with…

  18. Gestures and Insight in Advanced Mathematical Thinking

    ERIC Educational Resources Information Center

    Yoon, Caroline; Thomas, Michael O. J.; Dreyfus, Tommy

    2011-01-01

    What role do gestures play in advanced mathematical thinking? We argue that the role of gestures goes beyond merely communicating thought and supporting understanding--in some cases, gestures can help generate new mathematical insights. Gestures feature prominently in a case study of two participants working on a sequence of calculus activities.…

  19. Restructuring Schools in Kentucky: Insights from Superintendents.

    ERIC Educational Resources Information Center

    Murphy, Joseph

    This paper presents the insights of superintendents about the school restructuring process in Kentucky and its likely effects. Data were derived from a focus group held with 24 members of the Kentucky Educational Development Corporation (KEDC), and from a survey of 48 superintendents, of which 35 responded. A majority of respondents expressed…

  20. Innovative Leadership: Insights from a Learning Technologist

    ERIC Educational Resources Information Center

    Campbell, Bruce

    2012-01-01

    Professor Ricardo Torres Kompen is a leading proponent for, and researcher in, personal learning environments (PLEs). During his interview, Torres Kompen clarified his research on PLEs, particularly the digital toolbox within PLEs. He elaborated on experiences with implementing PLE initiatives, personal insights on using social media and Web 2.0…

  1. Developmental Social Cognitive Neuroscience: Insights from Deafness

    ERIC Educational Resources Information Center

    Corina, David; Singleton, Jenny

    2009-01-01

    The condition of deafness presents a developmental context that provides insight into the biological, cultural, and linguistic factors underlying the development of neural systems that impact social cognition. Studies of visual attention, behavioral regulation, language development, and face and human action perception are discussed. Visually…

  2. Insight into an Autism Spectrum Disorder

    ERIC Educational Resources Information Center

    Birch, Jen

    2006-01-01

    In this article, the author shares some insights on the characteristics of a person with Asperger's syndrome, a condition on the higher-functioning end of autism spectrum disorders (ASD). Born in 1955, the author was raised in rural South Auckland. As a baby, she propelled herself around the floor on her stomach, using her limbs as flippers,…

  3. Partnership Transitions and Maternal Parenting

    ERIC Educational Resources Information Center

    Beck, Audrey N.; Cooper, Carey E.; McLanahan, Sara; Brooks-Gunn, Jeanne

    2010-01-01

    We use data from the Fragile Families and Child Wellbeing Study (N = 1,975) to examine the association between mothers' partnership changes and parenting behavior during the first 5 years of their children's lives. We compare coresidential with dating transitions and recent with more distal transitions. We also examine interactions between…

  4. Adult Transition Program without Walls

    ERIC Educational Resources Information Center

    Moberg, Eric

    2010-01-01

    Best practices in adult transition special education for moderate to severe students suggest student-centered planning that maximizes independence in adult life. Based on the above sources, school districts and governing boards would best serve moderate to severe transition special education students with increasing integration into the community…

  5. Transition Planning for Foster Youth

    ERIC Educational Resources Information Center

    Geenen, Sarah J.; Powers, Laurie E.

    2006-01-01

    The study evaluated the IEPs/Individualized Transition Plans of 45 students who were in special education and foster care, and compared them to the plans of 45 students who were in special education only. Results indicate that the transition plans of foster youth with disabilities were poor in quality, both in absolute terms and in comparison to…

  6. School-to-Work Transition.

    ERIC Educational Resources Information Center

    ERIC Review, 1996

    1996-01-01

    The "ERIC Review" announces research results, publications, and new programs relevant to each issue's theme topic. This issue explores the topic of preparing young people to make the transition from school to work. The lead article by Ray D. Ryan and Susan Imel, "School-to-Work Transition: Genuine Reform or the Latest Fad?," summarizes…

  7. Sampling diffusive transition paths

    SciTech Connect

    F. Miller III, Thomas; Predescu, Cristian

    2006-10-12

    We address the problem of sampling double-ended diffusive paths. The ensemble of paths is expressed using a symmetric version of the Onsager-Machlup formula, which only requires evaluation of the force field and which, upon direct time discretization, gives rise to a symmetric integrator that is accurate to second order. Efficiently sampling this ensemble requires avoiding the well-known stiffness problem associated with sampling infinitesimal Brownian increments of the path, as well as a different type of stiffness associated with sampling the coarse features of long paths. The fine-features sampling stiffness is eliminated with the use of the fast sampling algorithm (FSA), and the coarse-feature sampling stiffness is avoided by introducing the sliding and sampling (S&S) algorithm. A key feature of the S&S algorithm is that it enables massively parallel computers to sample diffusive trajectories that are long in time. We use the algorithm to sample the transition path ensemble for the structural interconversion of the 38-atom Lennard-Jones cluster at low temperature.

  8. Structural and Mechanistic Insights into C-P Bond Hydrolysis by Phosphonoacetate Hydrolase

    SciTech Connect

    Agarwal, Vinayak; Borisova, Svetlana A.; Metcalf, William W.; van der Donk, Wilfred A.; Nair, Satish K.

    2011-12-22

    Bacteria have evolved pathways to metabolize phosphonates as a nutrient source for phosphorus. In Sinorhizobium meliloti 1021, 2-aminoethylphosphonate is catabolized to phosphonoacetate, which is converted to acetate and inorganic phosphate by phosphonoacetate hydrolase (PhnA). Here we present detailed biochemical and structural characterization of PhnA that provides insights into the mechanism of C-P bond cleavage. The 1.35 {angstrom} resolution crystal structure reveals a catalytic core similar to those of alkaline phosphatases and nucleotide pyrophosphatases but with notable differences, such as a longer metal-metal distance. Detailed structure-guided analysis of active site residues and four additional cocrystal structures with phosphonoacetate substrate, acetate, phosphonoformate inhibitor, and a covalently bound transition state mimic provide insight into active site features that may facilitate cleavage of the C-P bond. These studies expand upon the array of reactions that can be catalyzed by enzymes of the alkaline phosphatase superfamily.

  9. Analysis Insights, August 2015: Sustainable Transportation; NREL (National Renewable Energy Laboratory)

    SciTech Connect

    2015-08-01

    NREL Analysis Insights mines our body of analysis work to synthesize topical insights and key findings. In this issue, we examine transportation systems, alternative fuels, and implications of increasing electrification of transit. Moving people and goods from point A to B has never been easier, but our current transportation systems also take a toll on our environment. Transportation currently accounts for 71% of total U.S. petroleum use and 33% of the nation’s total carbon emissions. With new technology, can we make our transportation system cleaner and more cost effective? NREL is applying its analytical expertise and imagination to do just that. Solutions start with systems thinking. Connecting the dots between physical components - vehicles, fueling stations, and highways - and institutional components - traffic laws, regulations, and vehicle standards - helps illuminate solutions that address the needs of the transportation system's many stakeholders.

  10. Theory of antiferroelectric phase transitions

    NASA Astrophysics Data System (ADS)

    Tolédano, Pierre; Guennou, Mael

    2016-07-01

    At variance with structural ferroic phase transitions which give rise to macroscopic tensors coupled to macroscopic fields, criteria defining antiferroelectric (AFE) phase transitions are still under discussion due to the absence of specific symmetry properties characterizing their existence. They are recognized by the proximity of a ferroelectric (FE) phase induced under applied electric field, with a double hysteresis loop relating the induced polarization to the electric field and a typical anomaly of the dielectric permittivity. Here, we show that there exist indeed symmetry criteria defining AFE transitions. They relate the local symmetry of the polar crystallographic sites emerging at an AFE phase transition with the macroscopic symmetry of the AFE phase. The dielectric properties of AFE transitions are deduced from a Landau theoretical model in which ferroelectric and ferrielectric phases are shown to stabilize as the result of specific symmetry-allowed couplings of the AFE order parameter with the field-induced polarization.

  11. Migraine and the menopausal transition.

    PubMed

    Martin, Vincent T

    2014-05-01

    The menopausal transition or "perimenopause" represents a time period of turbulent changes in ovarian hormones as middle-aged women progress into menopause. The purpose of this article is to review the literature to determine the effect of the menopausal transition on migraine headaches and to develop a rational treatment approach to these patients. The menopausal transition is divided into early and stages based upon patterns of menstruation and specific reproductive hormones. Studies would suggest that the prevalence of migraine and other climacteric symptoms tend to peak during the late menopausal transition particularly in those with a past history of premenstrual stress disorder. Treatment approaches vary by stage of the menopausal transition and include conventional daily preventatives, mini-prophylaxis and hormonal therapies.

  12. Conformational transition paths harbor structures useful for aiding drug discovery and understanding enzymatic mechanisms in protein kinases.

    PubMed

    Wong, Chung F

    2016-01-01

    This short article examines the usefulness of fast simulations of conformational transition paths in elucidating enzymatic mechanisms and guiding drug discovery for protein kinases. It applies the transition path method in the MOIL software package to simulate the paths of conformational transitions between six pairs of structures from the Protein Data Bank. The structures along the transition paths were found to resemble experimental structures that mimic transient structures believed to form during enzymatic catalysis or conformational transitions, or structures that have drug candidates bound. These findings suggest that such simulations could provide quick initial insights into the enzymatic mechanisms or pathways of conformational transitions of proteins kinases, or could provide structures useful for aiding structure-based drug design.

  13. Insight, distress and coping styles in schizophrenia

    PubMed Central

    Cooke, Michael; Peters, Emmanuelle; Fannon, Dominic; Anilkumar, Anantha P.P.; Aasen, Ingrid; Kuipers, Elizabeth; Kumari, Veena

    2007-01-01

    Background The stigma and negative societal views attached to schizophrenia can make the diagnosis distressing. There is evidence that poor insight into symptoms of the disorder and need for treatment may reflect the use of denial as a coping style. However, the relationships between insight and other coping styles have seldom been investigated. Method We examined the associations between insight, distress and a number of coping styles in 65 outpatients with schizophrenia (final n = 57) in a cross-sectional study. Results We found that (i) awareness of symptoms and problems correlated with greater distress, (ii) ‘preference for positive reinterpretation and growth’ coping style correlated with lower distress and with lower symptom awareness (re-labelling), (iii) ‘preference for mental disengagement’ coping style correlated with greater distress and lower awareness of problems, and (iv) ‘social support-seeking’ coping style correlated with greater awareness of illness, but not distress. No relationship occurred between the use of ‘denial’ as a coping style and insight or distress. Conclusions Our findings demonstrate that awareness of illness and related problems is associated with greater distress in schizophrenia. However, this investigation has not supported a simple psychological denial explanation for this relationship, as complex relationships emerged between different dimensions of insight and coping styles. The negative association between ‘positive reinterpretation and growth’ and distress suggests that adopting this style may lead to re-labelling symptoms in a less distressing way. Avoidant and isolating styles of coping both appear unhelpful. Psychological interventions should aim to promote more active coping such as discussing a mental health problem with others. PMID:17561377

  14. Rural Agricultural Change and Fertility Transition in Nepal.

    PubMed

    Bhandari, Prem; Ghimire, Dirgha

    2013-06-01

    Using longitudinal panel data from the Western Chitwan Valley of Nepal, this study investigates the impact of the use of modern farm technologies on fertility transition-specifically, the number of births in a farm household. Previous explanations for the slow pace of fertility transition in rural agricultural settings often argued that the demand for farm labor is the primary driver of high fertility. If this argument holds true, the use of modern farm technologies that are designed to carry out labor-intensive farm activities ought to substitute for farm labor and discourage births in farm families. However, little empirical evidence is available on the potential influence of the use of modern farm technologies on the fertility transition. To fill this gap, the panel data examined in this study provides an unusual opportunity to test this long standing, but unexplored, argument. The results demonstrate that the use of modern farm technologies, particularly the use of a tractor and other modern farm implements, reduce subsequent births in farm households. This offers important insight for understanding the fertility transition in Nepal, a setting that is experiencing high population growth and rapidly changing farming practices. PMID:23729867

  15. Assessing transitional phenomena with the transitional object memory probe.

    PubMed

    Fowler, C; Hilsenroth, M J; Handler, L

    1998-01-01

    Winnicott's concept of transitional relatedness has captured the interest of psychoanalysts because it provides an understanding of the dialectical process occurring between inner and outer reality, and by extension, between analyst and analysand. Clinical observations related to transitional phenomena have led the authors to develop a projective early memory probe that assesses transitional phenomena. The transitional object early memory probe was tested both for its empirical validity and for its clinical utility in psychodynamic psychotherapy. Construct validity was assessed by comparing memory scores to the Rorschach Transitional Object Scale, as well as to therapist ratings of patient behaviors. Results demonstrated moderate correlations between early memory scores and Rorschach scale scores. Equally important was the finding that early memory scores were significantly correlated with therapist ratings of key behavioral patterns in therapy. A case vignette highlights the clinical application of the transitional object probe in assessing the capacity for transitional relatedness. In this case, the data gleaned from the patient's memories provided the therapist with a sharper focus on their role in the patient's growing capacity for more vital and creative contact with reality.

  16. Assessing transitional phenomena with the transitional object memory probe.

    PubMed

    Fowler, C; Hilsenroth, M J; Handler, L

    1998-01-01

    Winnicott's concept of transitional relatedness has captured the interest of psychoanalysts because it provides an understanding of the dialectical process occurring between inner and outer reality, and by extension, between analyst and analysand. Clinical observations related to transitional phenomena have led the authors to develop a projective early memory probe that assesses transitional phenomena. The transitional object early memory probe was tested both for its empirical validity and for its clinical utility in psychodynamic psychotherapy. Construct validity was assessed by comparing memory scores to the Rorschach Transitional Object Scale, as well as to therapist ratings of patient behaviors. Results demonstrated moderate correlations between early memory scores and Rorschach scale scores. Equally important was the finding that early memory scores were significantly correlated with therapist ratings of key behavioral patterns in therapy. A case vignette highlights the clinical application of the transitional object probe in assessing the capacity for transitional relatedness. In this case, the data gleaned from the patient's memories provided the therapist with a sharper focus on their role in the patient's growing capacity for more vital and creative contact with reality. PMID:9810109

  17. Spatiotemporal characteristics of the walk-to-run and run-to-walk transition when gradually changing speed.

    PubMed

    Segers, V; Aerts, P; Lenoir, M; De Clercq, D

    2006-10-01

    The purpose of this study was to examine spatiotemporal parameters of the walk-to-run transition (WRT) and run-to-walk transition (RWT) when speed is altered with different constant accelerations. Twenty women (height: 168.9+/-3.36cm) performed three accelerations (0.05, 0.07 and 0.1ms(-2)) and three decelerations (-0.05, -0.07 and -0.1ms(-2)) on a motor-driven treadmill. The transition step in the WRT (first step with a flight phase) and RWT (first step with a double stance phase) occurred at the same speed for all accelerations but these did not occur in the same way. The most striking difference was the presence of a transition step with specific spatiotemporal characteristics in the WRT, whereas this was not observed in the RWT. The transition is not a sudden one-step-event. WRT occurred before transition and consisted of a "pre-transition period" and the transition step whereas RWT occurred after transition and consisted of the transition step and a "post-transition period". Both transition periods were characterized by an exponential evolution of step frequency and step length. Step frequency and step length showed a linear evolution before and after transition. The flight phase of the transition step in the WRT reached a minimum with comparable duration of the last flight phase in the RWT. The flight phase could be considered as an intrinsic dynamical factor of transition. Further research in kinematics, the trajectory of the body centre of mass and energy fluctuations will give more insight in these transitions.

  18. The association of lifetime insight and cognition in psychosis.

    PubMed

    Sánchez-Torres, Ana M; Zarzuela, Amalia; Peralta, Victor; Cuesta, Manuel J

    2015-03-01

    Poor insight has been related to poor course in psychosis. However, the role of cognition in insight remains unclear. The aim of this study was to examine the influence of cognition and lifetime psychopathological dimensions on insight in psychosis. We followed up 42 patients with psychotic disorders over 10years. Lifetime psychopathological dimensions and cognitive performance were assessed. Patients were divided into two groups by lifetime patterns of insight and compared with 42 healthy volunteers. Lower IQ and poorer social cognition were associated with higher risks of poorer lifetime insight of feeling ill and global insight respectively. Lifetime negative symptoms were associated with a higher risk of poorer lifetime insight into symptoms. Lifetime lack of insight is independent of cognitive impairment in specific domains, except for social cognition. Higher IQ may contribute to better lifetime awareness of illness, while better ability to manage emotions is involved in lifetime global insight.

  19. Selenophene transition metal complexes

    SciTech Connect

    White, C.J.

    1994-07-27

    This research shows that selenophene transition metal complexes have a chemistry that is similar to their thiophene analogs. Selenophene coordination has been demonstrated and confirmed by molecular structure in both the {eta}{sup 5}- and the {eta}{sup 1}(Se)-coordination modes. The reaction chemistry of selenophene complexes closely resembles that of the analogous thiophene complexes. One major difference, however, is that selenophene is a better donor ligand than thiophene making the selenophene complexes more stable than the corresponding thiophene complexes. The {sup 77}Se NMR chemical shift values for selenophene complexes fall within distinct regions primarily depending on the coordination mode of the selenophene ligand. In the final paper, the C-H bond activation of {eta}{sup 1}(S)-bound thiophenes, {eta}{sup 1}(S)-benzothiophene and {eta}{sup 1}(Se)-bound selenophenes has been demonstrated. The deprotonation and rearrangement of the {eta}{sup 1}(E)-bound ligand to the carbon bound L-yl complex readily occurs in the presence of base. Reprotonation with a strong acid gives a carbene complex that is unreactive towards nucleophilic attack at the carbene carbon and is stable towards exposure to air. The molecular structure of [Cp(NO)(PPh{sub 3})Re(2-benzothioenylcarbene)]O{sub 3}SCF{sub 3} was determined and contains a Re-C bond with substantial double bond character. Methyl substitution for the thienylcarbene or selenylcarbene gives a carbene that rearranges thermally to give back the {eta}{sup 1}(E)-bound complex. Based on these model reactions, a new mechanism for the H/D exchange of thiophene over the hydrodesulfurization catalyst has been proposed.

  20. Insights into collective cell behaviour from populations of coupled chemical oscillators.

    PubMed

    Taylor, Annette F; Tinsley, Mark R; Showalter, Kenneth

    2015-08-21

    Biological systems such as yeast show coordinated activity driven by chemical communication between cells. Here, we show how experiments with coupled chemical oscillators can provide insights into collective behaviour in cellular systems. Two methods of coupling the oscillators are described: exchange of chemical species with the surrounding solution and computer-controlled illumination of a light-sensitive catalyst. The collective behaviour observed includes synchronisation, dynamical quorum sensing (a density dependent transition to population-wide oscillations), and chimera states, where oscillators spontaneously split into coherent and incoherent groups. At the core of the different types of behaviour lies an intracellular autocatalytic signal and an intercellular communication mechanism that influences the autocatalytic growth.

  1. 22 CFR 41.71 - Transit aliens.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 22 Foreign Relations 1 2012-04-01 2012-04-01 false Transit aliens. 41.71 Section 41.71 Foreign... NATIONALITY ACT, AS AMENDED Transit Aliens § 41.71 Transit aliens. (a) Transit aliens—general. An alien is classifiable as a nonimmigrant transit alien under INA 101(a) (15) (C) if the consular officer is...

  2. 22 CFR 41.71 - Transit aliens.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 22 Foreign Relations 1 2013-04-01 2013-04-01 false Transit aliens. 41.71 Section 41.71 Foreign... NATIONALITY ACT, AS AMENDED Transit Aliens § 41.71 Transit aliens. (a) Transit aliens—general. An alien is classifiable as a nonimmigrant transit alien under INA 101(a) (15) (C) if the consular officer is...

  3. 22 CFR 41.71 - Transit aliens.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 22 Foreign Relations 1 2014-04-01 2014-04-01 false Transit aliens. 41.71 Section 41.71 Foreign... NATIONALITY ACT, AS AMENDED Transit Aliens § 41.71 Transit aliens. (a) Transit aliens—general. An alien is classifiable as a nonimmigrant transit alien under INA 101(a) (15) (C) if the consular officer is...

  4. 22 CFR 41.71 - Transit aliens.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 22 Foreign Relations 1 2010-04-01 2010-04-01 false Transit aliens. 41.71 Section 41.71 Foreign... NATIONALITY ACT, AS AMENDED Transit Aliens § 41.71 Transit aliens. (a) Transit aliens—general. An alien is classifiable as a nonimmigrant transit alien under INA 101(a) (15) (C) if the consular officer is...

  5. 22 CFR 41.71 - Transit aliens.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 22 Foreign Relations 1 2011-04-01 2011-04-01 false Transit aliens. 41.71 Section 41.71 Foreign... NATIONALITY ACT, AS AMENDED Transit Aliens § 41.71 Transit aliens. (a) Transit aliens—general. An alien is classifiable as a nonimmigrant transit alien under INA 101(a) (15) (C) if the consular officer is...

  6. The "Insight Paradox" in Schizophrenia: Magnitude, Moderators and Mediators of the Association Between Insight and Depression.

    PubMed

    Belvederi Murri, Martino; Amore, Mario; Calcagno, Pietro; Respino, Matteo; Marozzi, Valentina; Masotti, Mattia; Bugliani, Michele; Innamorati, Marco; Pompili, Maurizio; Galderisi, Silvana; Maj, Mario

    2016-09-01

    The so-called "insight paradox" posits that among patients with schizophrenia higher levels of insight are associated with increased levels of depression. Although different studies examined this issue, only few took in account potential confounders or factors that could influence this association. In a sample of clinically stable patients with schizophrenia, insight and depression were evaluated using the Scale to assess Unawareness of Mental Disorder and the Calgary Depression Scale for Schizophrenia. Other rating scales were used to assess the severity of psychotic symptoms, extrapyramidal symptoms, hopelessness, internalized stigma, self-esteem, and service engagement. Regression models were used to estimate the magnitude of the association between insight and depression while accounting for the role of confounders. Putative psychological and sociodemographic factors that could act as mediators and moderators were examined using the PROCESS macro. By accounting for the role of confounding factors, the strength of the association between insight into symptoms and depression increased from 13% to 25% explained covariance. Patients with lower socioeconomic status (F = 8.5, P = .04), more severe illness (F = 4.8, P = .03) and lower levels of service engagement (F = 4.7, P = .03) displayed the strongest association between insight and depression. Lastly, hopelessness, internalized stigma and perceived discrimination acted as significant mediators. The relationship between insight and depression should be considered a well established phenomenon among patients with schizophrenia: it seems stronger than previously reported especially among patients with lower socioeconomic status, severe illness and poor engagement with services. These findings may have relevant implications for the promotion of insight among patients with schizophrenia.

  7. The "Insight Paradox" in Schizophrenia: Magnitude, Moderators and Mediators of the Association Between Insight and Depression.

    PubMed

    Belvederi Murri, Martino; Amore, Mario; Calcagno, Pietro; Respino, Matteo; Marozzi, Valentina; Masotti, Mattia; Bugliani, Michele; Innamorati, Marco; Pompili, Maurizio; Galderisi, Silvana; Maj, Mario

    2016-09-01

    The so-called "insight paradox" posits that among patients with schizophrenia higher levels of insight are associated with increased levels of depression. Although different studies examined this issue, only few took in account potential confounders or factors that could influence this association. In a sample of clinically stable patients with schizophrenia, insight and depression were evaluated using the Scale to assess Unawareness of Mental Disorder and the Calgary Depression Scale for Schizophrenia. Other rating scales were used to assess the severity of psychotic symptoms, extrapyramidal symptoms, hopelessness, internalized stigma, self-esteem, and service engagement. Regression models were used to estimate the magnitude of the association between insight and depression while accounting for the role of confounders. Putative psychological and sociodemographic factors that could act as mediators and moderators were examined using the PROCESS macro. By accounting for the role of confounding factors, the strength of the association between insight into symptoms and depression increased from 13% to 25% explained covariance. Patients with lower socioeconomic status (F = 8.5, P = .04), more severe illness (F = 4.8, P = .03) and lower levels of service engagement (F = 4.7, P = .03) displayed the strongest association between insight and depression. Lastly, hopelessness, internalized stigma and perceived discrimination acted as significant mediators. The relationship between insight and depression should be considered a well established phenomenon among patients with schizophrenia: it seems stronger than previously reported especially among patients with lower socioeconomic status, severe illness and poor engagement with services. These findings may have relevant implications for the promotion of insight among patients with schizophrenia. PMID:27069064

  8. Microemulsion: New Insights into the Ocular Drug Delivery

    PubMed Central

    Hegde, Rahul Rama; Verma, Anurag; Ghosh, Amitava

    2013-01-01

    Delivery of drugs into eyes using conventional drug delivery systems, such as solutions, is a considerable challenge to the treatment of ocular diseases. Drug loss from the ocular surface by lachrymal fluid secretion, lachrymal fluid-eye barriers, and blood-ocular barriers are main obstacles. A number of ophthalmic drug delivery carriers have been made to improve the bioavailability and to prolong the residence time of drugs applied topically onto the eye. The potential use of microemulsions as an ocular drug delivery carrier offers several favorable pharmaceutical and biopharmaceutical properties such as their excellent thermodynamic stability, phase transition to liquid-crystal state, very low surface tension, and small droplet size, which may result in improved ocular drug retention, extended duration of action, high ocular absorption, and permeation of loaded drugs. Further, both lipophilic and hydrophilic characteristics are present in microemulsions, so that the loaded drugs can diffuse passively as well get significantly partitioned in the variable lipophilic-hydrophilic corneal barrier. This review will provide an insight into previous studies on microemulsions for ocular delivery of drugs using various nonionic surfactants, cosurfactants, and associated irritation potential on the ocular surface. The reported in vivo experiments have shown a delayed effect of drug incorporated in microemulsion and an increase in the corneal permeation of the drug. PMID:23936681

  9. Microemulsion: new insights into the ocular drug delivery.

    PubMed

    Hegde, Rahul Rama; Verma, Anurag; Ghosh, Amitava

    2013-01-01

    Delivery of drugs into eyes using conventional drug delivery systems, such as solutions, is a considerable challenge to the treatment of ocular diseases. Drug loss from the ocular surface by lachrymal fluid secretion, lachrymal fluid-eye barriers, and blood-ocular barriers are main obstacles. A number of ophthalmic drug delivery carriers have been made to improve the bioavailability and to prolong the residence time of drugs applied topically onto the eye. The potential use of microemulsions as an ocular drug delivery carrier offers several favorable pharmaceutical and biopharmaceutical properties such as their excellent thermodynamic stability, phase transition to liquid-crystal state, very low surface tension, and small droplet size, which may result in improved ocular drug retention, extended duration of action, high ocular absorption, and permeation of loaded drugs. Further, both lipophilic and hydrophilic characteristics are present in microemulsions, so that the loaded drugs can diffuse passively as well get significantly partitioned in the variable lipophilic-hydrophilic corneal barrier. This review will provide an insight into previous studies on microemulsions for ocular delivery of drugs using various nonionic surfactants, cosurfactants, and associated irritation potential on the ocular surface. The reported in vivo experiments have shown a delayed effect of drug incorporated in microemulsion and an increase in the corneal permeation of the drug. PMID:23936681

  10. New insight into neurodegeneration: the role of proteomics.

    PubMed

    Pal, Ramavati; Alves, Guido; Larsen, Jan Petter; Møller, Simon Geir

    2014-06-01

    Recent advances within the field of proteomics, including both upstream and downstream protocols, have fuelled a transition from simple protein identification to functional analysis. A battery of proteomics approaches is now being employed for the analysis of protein expression levels, the monitoring of cellular activities and for gaining an increased understanding into biochemical pathways. Combined, these approaches are changing the way we study disease by allowing accurate and targeted, large scale protein analysis, which will provide invaluable insight into disease pathogenesis. Neurodegenerative disorders, including Alzheimer's disease (AD), Parkinson's disease (PD), Huntington's disease (HD), amyotrophic lateral sclerosis (ALS), prion disease, and other diseases that affect the neuromuscular system, are a leading cause of disability in the aging population. There are no effective intervention strategies for these disorders and diagnosis is challenging as it relies primarily on clinical symptomatic features, which often overlap at early stages of disease. There is, therefore, an urgent need to develop reliable biomarkers to improve early and specific diagnosis, to track disease progression, to measure molecular responses towards treatment regimes and ultimately devise new therapeutic strategies. To accomplish this, a better understanding of disease mechanisms is needed. In this review we summarize recent advances in the field of proteomics applicable to neurodegenerative disorders, and how these advances are fueling our understanding, diagnosis, and treatment of these complex disorders. PMID:24323427

  11. Molecular and isotopic insights into methane oxidation in Lake Kivu

    NASA Astrophysics Data System (ADS)

    Zigah, P. K.; Wehrli, B.; Schubert, C. J.

    2013-12-01

    Lake Kivu is a meromictic lake in the East African Rift Valley, located between the Republic of Rwanda and the Democratic Republic of Congo. The hypolimnion is permanently stratified and contain an unusually high amount of dissolved methane (CH4; ~ 60 km3) and carbon dioxide (CO2; ~300 km3) at standard temperature and pressure. While microbial-mediated methane oxidation is an important sink of methane in the lake, little is known about the distribution of microbes involved in the methane oxidation. To provide insights into methanotrophy in the lake, we analyzed depth profile of CH4, δ13C-CH4 and δ13C-DIC, δ13C-POC and the biomarkers of methanotrophic archaea and bacteria and their stable carbon isotopic composition from suspended particulate matter isolated from the lake water column. Our preliminary data show enhanced methane oxidation in oxic-anoxic transition zone in the water column. Depth distribution of diagnostic methanotrophic archaeal biomarkers such as archaeol and hydroxyarchaeol suggest archaea might be involved in anaerobic methane oxidation. Phospholipid fatty acids and diplopterol distribution and carbon isotopic signatures indicate bacteria-mediated anaerobic (and aerobic) methane oxidation in the lake.

  12. Mechanistic insights into the mode of action of anticandidal sesamol.

    PubMed

    Ansari, Moiz A; Fatima, Zeeshan; Hameed, Saif

    2016-09-01

    Previously we have deciphered the antifungal effect of sesamol (Ses), a phenolic compound obtained from sesame oil, against human fungal pathogen Candida albicans. To gain deeper insights into the possible mechanisms involved, transcription profiling was done in presence of Ses which revealed various targets through which Ses was barricading the growth of C. albicans. We observed that Ses perturbs membrane integrity confirming our previous observations and displayed disrupted plasma membrane ATPase activity. We further investigated that Ses leads to inhibited morphological transition, biofilm formation and epithelial cell adhesion which are significant virulence attributes required for pathogenesis. Interestingly, Ses also causes amendment in iron homeostasis as revealed by hypersensitivity under iron deprivation, ferroxidase assay to estimate iron levels and concomitant upregulation of FTR2, a high affinity iron transporter. Finally we assessed that Ses causes defect in mitochondrial functioning and DNA repair mechanism. Together, being source of consumable natural product, further studies on Ses are warranted so that it can be exploited as effective antifungal agent. PMID:27392701

  13. New insight into neurodegeneration: the role of proteomics.

    PubMed

    Pal, Ramavati; Alves, Guido; Larsen, Jan Petter; Møller, Simon Geir

    2014-06-01

    Recent advances within the field of proteomics, including both upstream and downstream protocols, have fuelled a transition from simple protein identification to functional analysis. A battery of proteomics approaches is now being employed for the analysis of protein expression levels, the monitoring of cellular activities and for gaining an increased understanding into biochemical pathways. Combined, these approaches are changing the way we study disease by allowing accurate and targeted, large scale protein analysis, which will provide invaluable insight into disease pathogenesis. Neurodegenerative disorders, including Alzheimer's disease (AD), Parkinson's disease (PD), Huntington's disease (HD), amyotrophic lateral sclerosis (ALS), prion disease, and other diseases that affect the neuromuscular system, are a leading cause of disability in the aging population. There are no effective intervention strategies for these disorders and diagnosis is challenging as it relies primarily on clinical symptomatic features, which often overlap at early stages of disease. There is, therefore, an urgent need to develop reliable biomarkers to improve early and specific diagnosis, to track disease progression, to measure molecular responses towards treatment regimes and ultimately devise new therapeutic strategies. To accomplish this, a better understanding of disease mechanisms is needed. In this review we summarize recent advances in the field of proteomics applicable to neurodegenerative disorders, and how these advances are fueling our understanding, diagnosis, and treatment of these complex disorders.

  14. Jamming transition in hierarchical networks

    NASA Astrophysics Data System (ADS)

    Cheng, Xiang; Boettcher, Stefan

    2014-03-01

    Jamming transitions arise in disordered granular materials where the systems fall out of equilibrium due to an increase in the packing density. A kinetically constrained lattice gas model due to Biroli and Mezard (BM) has connected the jamming transition to an equilibrium phase transition. In this description, before this equilibrium transition can be reached, any experiment or simulation would fall out of equilibrium at a Kauzmann transition. However, this analysis is based on a mean-field calculation which, for disordered systems, may have limited relevance in finite dimensions. We study the BM-model on a lattice-like network, which mixes geometric and mean-field features, to reproduce such a phase transition. Computationally, we use the Wang-Landau algorithm which should be less affected by the jamming near the phase transition. The algorithm produces the density of states and, hence, the entropy directly, in addition to many critical properties, such as packing fraction, compressibility, etc. Also, lattice-like hierarchical networks conveniently allow exact or approximate renormalization group treatments, extending analytical results to the thermodynamic limit. Supported through NSF grant DMR-1207431.

  15. The Visibility of Earth Transits

    NASA Technical Reports Server (NTRS)

    Castellano, Timothy P.; Doyle, Laurance; McIntosh, Dawn; DeVincenzi, Donald (Technical Monitor)

    2000-01-01

    The recent photometric detection of planetary transits of the solar-like star HD 209458 at a distance of 47 parsecs suggest that transits can reveal the presence of Jupiter-size planetary companions in the solar neighborhood. Recent space-based transit searches have achieved photometric precision within an order of magnitude of that required to detect the much smaller transit signal of an earth-size planet across a solar-size star. Laboratory experiments in the presence of realistic noise sources have shown that CCDs can achieve photometric precision adequate to detect the 9.6 E-5 dimming of the Sun due to a transit of the Earth. Space-based solar irradiance monitoring has shown that the intrinsic variability of the Sun would not preclude such a detection. Transits of the Sun by the Earth would be detectable by observers that reside within a narrow band of sky positions near the ecliptic plane, if the observers possess current Earth epoch levels of technology and astronomical expertise. A catalog of solar-like stars that satisfy the geometric condition for Earth transit visibility are presented.

  16. The Visibility of Earth Transits

    NASA Technical Reports Server (NTRS)

    Castellano, Tim; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    The recent detection of planetary transits of the solar-like star HD 209458 at a distance of 47 parsecs suggest that transits can reveal the presence of Jupiter-size planetary companions in the solar neighborhood. Recent space-based transit searches have achieved photometric precision within an order of magnitude of that required to detect the much smaller transit signal of an earth-size planet around a solar-size star. Laboratory experiments in the presence of realistic noise sources have shown that CCDs can achieve photometric precision adequate to detect the 9.6 E-5 dimming, of the Sun due to a transit of the Earth. Space-based solar irradiance monitoring has shown that the intrinsic variability of the Sun would not preclude such a detection. Transits of the Sun by the Earth would be detectable by observers that reside within a narrow band of sky positions near the ecliptic plane, if the observers possess current Earth epoch levels of technology and astronomical expertise. A catalog of candidate target stars, their properties, and simulations of the photometric Earth transit signal detectability at each target is presented.

  17. Observational biases for transiting planets

    NASA Astrophysics Data System (ADS)

    Kipping, David M.; Sandford, Emily

    2016-09-01

    Observational biases distort our view of nature, such that the patterns we see within a surveyed population of interest are often unrepresentative of the truth we seek. Transiting planets currently represent the most informative data set on the ensemble properties of exoplanets within 1 AU of their star. However, the transit method is inherently biased due to both geometric and detection-driven effects. In this work, we derive the overall observational biases affecting the most basic transit parameters from first principles. By assuming a trapezoidal transit and using conditional probability, we infer the expected distribution of these terms both as a joint distribution and in a marginalized form. These general analytic results provide a baseline against which to compare trends predicted by mission-tailored injection/recovery simulations and offer a simple way to correct for observational bias. Our results explain why the observed population of transiting planets displays a non-uniform impact parameter distribution, with a bias towards near-equatorial geometries. We also find that the geometric bias towards observed planets transiting near periastron is attenuated by the longer durations which occur near apoastron. Finally, we predict that the observational bias with respect to ratio-of-radii is super-quadratic, scaling as (RP/R⋆)5/2, driven by an enhanced geometric transit probability and modestly longer durations.

  18. Electronic Transitions of Yttrium Monophosphide

    NASA Astrophysics Data System (ADS)

    Cheung, Allan S. C.; Li, Biu Wa; Chan, MAN-CHOR

    2015-06-01

    Electronic transition spectrum of the yttrium monophosphide (YP) molecule in the visible region between 715 nm and 880 nm has been recorded using laser ablation/reaction free-jet expansion and laser induced fluorescence spectroscopy. The YP molecule was produced by reacting laser - ablated yttrium atoms with PH3 seeded in argon. Thirteen vibrational bands were analyzed and five electronic transition systems have identified, namely the [12.2] Ω = 3 - X3 Π_2 transition, [13.3] Ω = 3 - X3 Π_2 transition, [13.4] Ω = 3 - X3 Π_2 transition, [13.5] Ω = 3 - X3 Π_2 transition, and [13.4] Ω = 2 - X3 Π_2 transition. Least squares fits of the measured rotational lines yielded molecular constants for the ground and excited states. The ground state symmetry and the bond length r_0 of the YP molecule have been determined to be a X3 Π_2 state and 2.4413 Å respectively in this work. A molecular orbital energy level diagram has been used to help the assignment of the observed electronic states. This work represents the first experimental investigation of the spectrum of the YP molecule.

  19. Major evolutionary transitions in individuality

    PubMed Central

    West, Stuart A.; Fisher, Roberta M.; Gardner, Andy; Kiers, E. Toby

    2015-01-01

    The evolution of life on earth has been driven by a small number of major evolutionary transitions. These transitions have been characterized by individuals that could previously replicate independently, cooperating to form a new, more complex life form. For example, archaea and eubacteria formed eukaryotic cells, and cells formed multicellular organisms. However, not all cooperative groups are en route to major transitions. How can we explain why major evolutionary transitions have or haven’t taken place on different branches of the tree of life? We break down major transitions into two steps: the formation of a cooperative group and the transformation of that group into an integrated entity. We show how these steps require cooperation, division of labor, communication, mutual dependence, and negligible within-group conflict. We find that certain ecological conditions and the ways in which groups form have played recurrent roles in driving multiple transitions. In contrast, we find that other factors have played relatively minor roles at many key points, such as within-group kin discrimination and mechanisms to actively repress competition. More generally, by identifying the small number of factors that have driven major transitions, we provide a simpler and more unified description of how life on earth has evolved. PMID:25964342

  20. Fluctuation driven electroweak phase transition

    NASA Technical Reports Server (NTRS)

    Gleiser, Marcelo; Kolb, Edward W.

    1991-01-01

    We examine the dynamics of the electroweak phase transition in the early Universe. For Higgs masses in the range 46 less than or = M sub H less than or = 150 GeV and top quark masses less than 200 GeV, regions of symmetric and asymmetric vacuum coexist to below the critical temperature, with thermal equilibrium between the two phases maintained by fluctuations of both phases. We propose that the transition to the asymmetric vacuum is completed by percolation of these subcritical fluctuations. Our results are relevant to scenarios of baryogenesis that invoke a weakly first-order phase transition at the electroweak scale.

  1. Nonradiative transition dynamics in alexandrite

    NASA Technical Reports Server (NTRS)

    Gayen, S. K.; Wang, W. B.; Petricevic, V.; Alfano, R. R.

    1986-01-01

    The first direct picosecond time-resolved measurement of the nonradiative transition dynamics between the excited 4T2 pump band and the metastable 2E storage level of the trivalent chromium ion in alexandrite is reported. The nonradiative relaxation times of 17 ps for intra-4T2 vibrational transitions, and 27 ps for 4T2-2E electronic transition are obtained. The thermal repopulation rate of the 4T2 state from the metastable 2E level is of the order 3.5 x 10 to the 9th per s.

  2. Freezing transition in decaying Burgers turbulence and random matrix dualities

    NASA Astrophysics Data System (ADS)

    Fyodorov, Y. V.; Le Doussal, P.; Rosso, A.

    2010-06-01

    We reveal a phase transition with decreasing viscosity ν at ν=νc>0 in one-dimensional decaying Burgers turbulence with a power-law-correlated random profile of Gaussian-distributed initial velocities \\overline{v(x,0)v(x',0)}\\sim\\vert x-x'\\vert ^{-2} . The low-viscosity phase exhibits non-Gaussian one-point probability density of velocities, continuously dependent on ν, reflecting a spontaneous one-step replica symmetry breaking (RSB) in the associated statistical-mechanics problem. We obtain the low orders cumulants analytically. Our results, which are checked numerically, are based on combining insights in the mechanism of the freezing transition in random logarithmic potentials with an extension of duality relations discovered recently in the random matrix theory. They are essentially non-mean-field in nature as also demonstrated by the shock size distribution computed numerically and different from the short-range-correlated Kida model. We also provide some insights for the finite-viscosity behaviour of velocities in the latter model.

  3. Human DNMT1 transition state structure

    PubMed Central

    Du, Quan; Wang, Zhen; Schramm, Vern L.

    2016-01-01

    Human DNA methyltransferase 1 (DNMT1) maintains the epigenetic state of DNA by replicating CpG methylation signatures from parent to daughter strands, producing heritable methylation patterns through cell divisions. The proposed catalytic mechanism of DNMT1 involves nucleophilic attack of Cys1226 to cytosine (Cyt) C6, methyl transfer from S-adenosyl-l-methionine (SAM) to Cyt C5, and proton abstraction from C5 to form methylated CpG in DNA. Here, we report the subangstrom geometric and electrostatic structure of the major transition state (TS) of the reaction catalyzed by human DNMT1. Experimental kinetic isotope effects were used to guide quantum mechanical calculations to solve the TS structure. Methyl transfer occurs after Cys1226 attack to Cyt C6, and the methyl transfer step is chemically rate-limiting for DNMT1. Electrostatic potential maps were compared for the TS and ground states, providing the electronic basis for interactions between the protein and reactants at the TS. Understanding the TS of DNMT1 demonstrates the possibility of using similar analysis to gain subangstrom geometric insight into the complex reactions of epigenetic modifications. PMID:26929335

  4. Human DNMT1 transition state structure.

    PubMed

    Du, Quan; Wang, Zhen; Schramm, Vern L

    2016-03-15

    Human DNA methyltransferase 1 (DNMT1) maintains the epigenetic state of DNA by replicating CpG methylation signatures from parent to daughter strands, producing heritable methylation patterns through cell divisions. The proposed catalytic mechanism of DNMT1 involves nucleophilic attack of Cys(1226) to cytosine (Cyt) C6, methyl transfer from S-adenosyl-l-methionine (SAM) to Cyt C5, and proton abstraction from C5 to form methylated CpG in DNA. Here, we report the subangstrom geometric and electrostatic structure of the major transition state (TS) of the reaction catalyzed by human DNMT1. Experimental kinetic isotope effects were used to guide quantum mechanical calculations to solve the TS structure. Methyl transfer occurs after Cys(1226) attack to Cyt C6, and the methyl transfer step is chemically rate-limiting for DNMT1. Electrostatic potential maps were compared for the TS and ground states, providing the electronic basis for interactions between the protein and reactants at the TS. Understanding the TS of DNMT1 demonstrates the possibility of using similar analysis to gain subangstrom geometric insight into the complex reactions of epigenetic modifications. PMID:26929335

  5. History of desorption induced by electronic transitions

    NASA Astrophysics Data System (ADS)

    Madey, Theodore E.

    1994-01-01

    Desorption induced by electronic transitions (DIET) encompasses electron- and photon-stimulated desorption (ESD and PSD) of atoms, molecules and ions from surfaces. In this paper, we focus on the key experimental and theoretical developments that have led to a fundamental understanding of DIET processes. We emphasize the effects of ionizing radiation, i.e., electrons and photons with energies ≳ 10 eV. The first DIET studies were occasioned mainly by the observation of anomalous peaks in mass spectrometers and spurious signals in ionization gauges. These observations were followed in the early 1960's by systematic studies of Redhead, and Menzel and Gomer, who independently proposed a Franck-Condon excitation model for electron-stimulated desorption of ions and neutrals from surfaces. In the years after this seminal work, ESD and PSD developed as fields of active interest to surface scientists. In addition to providing insights into the fundamental mechanisms linking atomic motion and electronic energy dissipation at surfaces, DIET investigations are continuing to impact upon radiation damage processes in areas as diverse as X-ray optics, semiconductor electronics, surface analysis and synthesis of molecules in interplanetary space.

  6. Empowering Students in Transition

    PubMed Central

    Sullivan, Ann-Catherine

    2016-01-01

    The purpose of this study was to (a) identify potential benefits for students with disabilities taking part in a physical activity program with same-age typical peers on a Midwest university campus and (b) to determine if the program impacted the students with disabilities empowerment. Empowerment theory was used to determine how transition students’ attitudes change over the course of the semester while participating in a workout buddy program with same-age college peers. The program was structured to provide a sense of empowerment to students to make their own decisions and learn for themselves so they do not feel a lack of power in their lives. This study implemented elements of a quantitative design but a majority utilized a qualitative design based on the assumptions of the Interpretivist paradigm. The quantitative design elements focused on the analysis of two questionnaires: Sports Questionnaire and the Perceived Control Scale Questionnaire. The analysis of the focus group data revealed the following themes as positive effects of the intervention: positive effect on empowerment, how happy the program made the students, what benefits the students gained from the program, the student’s familiarity with university students, and the environment, and, lastly, the students ability to ask for assistance when need. Findings from the study determined that the empowerment of the students with disabilities was impacted while participating in the program. In general, the findings of gaining empowerment were similar to previous studies in that students with disabilities are able to gain empowerment from participation in fitness and recreation programs. The researcher noted during focus groups that some of the Best of Both Worlds (BOBW) students were not confident in starting conversations with their university peers. Although the BOBW students felt a sense of losing empowerment with this specific instance, there was an overall positive impact on the BOBW students

  7. Immigration and adult transitions.

    PubMed

    Rumbaut, Rubén G; Komaie, Golnaz

    2010-01-01

    Almost 30 percent of the more than 68 million young adults aged eighteen to thirty-four in the United States today are either foreign born or of foreign parentage. As these newcomers make their transitions to adulthood, say Rubén Rumbaut and Golnaz Komaie, they differ significantly not only from one another but also from their native-parentage counterparts, including blacks and whites. The authors document the demographic changes in the United States over the past forty years and describe the ways in which generation and national origin shape the experiences of these newcomers as they become adults. Rumbaut and Komaie point out that immigrant groups experience gaps in social, economic, and legal status that are even greater than the gaps between native whites and blacks. By far the most-educated (Indians) and the least-educated (Mexicans) groups in the United States today are first-generation immigrants, as are the groups with the lowest poverty rate (Filipinos) and the highest poverty rate (Dominicans). These social and economic divides reflect three very different ways immigrants enter the country: through regular immigration channels, without legal authorization, or as state-sponsored refugees. For many ethnic groups, significant progress takes place from the first to the second generation. But, say the authors, for millions of young immigrants, a lack of legal permanent residency status blocks their prospects for social mobility. Having an undocumented status has become all the more consequential with the failure of Congress to pass comprehensive federal immigration reforms. In the coming two decades, as the U.S. native-parentage labor force continues to shrink, immigrants and their children are expected to account for most of the growth of the nation's labor force, with the fastest-growing occupations requiring college degrees. Rumbaut and Komaie stress that one key to the nation's future will be how it incorporates young adults of immigrant origin in its

  8. Genomic insights into the marine sponge microbiome.

    PubMed

    Hentschel, Ute; Piel, Jörn; Degnan, Sandie M; Taylor, Michael W

    2012-09-01

    Marine sponges (phylum Porifera) often contain dense and diverse microbial communities, which can constitute up to 35% of the sponge biomass. The genome of one sponge, Amphimedon queenslandica, was recently sequenced, and this has provided new insights into the origins of animal evolution. Complementary efforts to sequence the genomes of uncultivated sponge symbionts have yielded the first glimpse of how these intimate partnerships are formed. The remarkable microbial and chemical diversity of the sponge-microorganism association, coupled with its postulated antiquity, makes sponges important model systems for the study of metazoan host-microorganism interactions, and their evolution, as well as for enabling access to biotechnologically important symbiont-derived natural products. In this Review, we discuss our current understanding of the interactions between marine sponges and their microbial symbiotic consortia, and highlight recent insights into these relationships from genomic studies.

  9. Insights from Human/Mouse genome comparisons

    SciTech Connect

    Pennacchio, Len A.

    2003-03-30

    Large-scale public genomic sequencing efforts have provided a wealth of vertebrate sequence data poised to provide insights into mammalian biology. These include deep genomic sequence coverage of human, mouse, rat, zebrafish, and two pufferfish (Fugu rubripes and Tetraodon nigroviridis) (Aparicio et al. 2002; Lander et al. 2001; Venter et al. 2001; Waterston et al. 2002). In addition, a high-priority has been placed on determining the genomic sequence of chimpanzee, dog, cow, frog, and chicken (Boguski 2002). While only recently available, whole genome sequence data have provided the unique opportunity to globally compare complete genome contents. Furthermore, the shared evolutionary ancestry of vertebrate species has allowed the development of comparative genomic approaches to identify ancient conserved sequences with functionality. Accordingly, this review focuses on the initial comparison of available mammalian genomes and describes various insights derived from such analysis.

  10. Exploring Insight: Focus on Shifts of Attention

    ERIC Educational Resources Information Center

    Palatnik, Alik; Koichu, Boris

    2015-01-01

    The paper presents and analyses a sequence of events that preceded an insight solution to a challenging problem in the context of numerical sequences. A three­week long solution process by a pair of ninth­-grade students is analysed by means of the theory of shifts of attention. The goal for this article is to reveal the potential of this theory…

  11. 2016 Mars Insight Mission Design and Navigation

    NASA Technical Reports Server (NTRS)

    Abilleira, Fernando; Frauenholz, Ray; Fujii, Ken; Wallace, Mark; You, Tung-Han

    2014-01-01

    Scheduled for a launch in the 2016 Earth to Mars opportunity, the Interior Exploration using Seismic Investigations, Geodesy, and Heat Transport (InSight) Mission will arrive to Mars in late September 2016 with the primary objective of placing a science lander on the surface of the Red Planet followed by the deployment of two science instruments to investigate the fundamental processes of terrestrial planet formation and evolution. In order to achieve a successful landing, the InSight Project has selected a launch/arrival strategy that satisfies the following key and driving requirements: (1) Deliver a total launch mass of 727 kg, (2) target a nominal landing site with a cumulative Delta V99 less than 30 m/s, and (3) approach EDL with a V-infinity upper limit of 3.941 km/s and (4) an entry flight-path angle (EFPA) of -12.5 +/- 0.26 deg, 3-sigma; the InSight trajectories have been designed such that they (5) provide UHF-band communications via Direct-To-Earth and MRO from Entry through landing plus 60 s, (6) with injection aimpoints biased away from Mars such that the probability of the launch vehicle upper stage impacting Mars is less than 1.0 X 10(exp 4) for fifty years after launch, and (7) non-nominal impact probabilities due to failure during the Cruise phase less than 1.0 X 10(exp 2).

  12. Insightful problem solving in an Asian elephant.

    PubMed

    Foerder, Preston; Galloway, Marie; Barthel, Tony; Moore, Donald E; Reiss, Diana

    2011-01-01

    The "aha" moment or the sudden arrival of the solution to a problem is a common human experience. Spontaneous problem solving without evident trial and error behavior in humans and other animals has been referred to as insight. Surprisingly, elephants, thought to be highly intelligent, have failed to exhibit insightful problem solving in previous cognitive studies. We tested whether three Asian elephants (Elephas maximus) would use sticks or other objects to obtain food items placed out-of-reach and overhead. Without prior trial and error behavior, a 7-year-old male Asian elephant showed spontaneous problem solving by moving a large plastic cube, on which he then stood, to acquire the food. In further testing he showed behavioral flexibility, using this technique to reach other items and retrieving the cube from various locations to use as a tool to acquire food. In the cube's absence, he generalized this tool utilization technique to other objects and, when given smaller objects, stacked them in an attempt to reach the food. The elephant's overall behavior was consistent with the definition of insightful problem solving. Previous failures to demonstrate this ability in elephants may have resulted not from a lack of cognitive ability but from the presentation of tasks requiring trunk-held sticks as potential tools, thereby interfering with the trunk's use as a sensory organ to locate the targeted food. PMID:21876741

  13. Insightful Problem Solving in an Asian Elephant

    PubMed Central

    Foerder, Preston; Galloway, Marie; Barthel, Tony; Moore, Donald E.; Reiss, Diana

    2011-01-01

    The “aha” moment or the sudden arrival of the solution to a problem is a common human experience. Spontaneous problem solving without evident trial and error behavior in humans and other animals has been referred to as insight. Surprisingly, elephants, thought to be highly intelligent, have failed to exhibit insightful problem solving in previous cognitive studies. We tested whether three Asian elephants (Elephas maximus) would use sticks or other objects to obtain food items placed out-of-reach and overhead. Without prior trial and error behavior, a 7-year-old male Asian elephant showed spontaneous problem solving by moving a large plastic cube, on which he then stood, to acquire the food. In further testing he showed behavioral flexibility, using this technique to reach other items and retrieving the cube from various locations to use as a tool to acquire food. In the cube's absence, he generalized this tool utilization technique to other objects and, when given smaller objects, stacked them in an attempt to reach the food. The elephant's overall behavior was consistent with the definition of insightful problem solving. Previous failures to demonstrate this ability in elephants may have resulted not from a lack of cognitive ability but from the presentation of tasks requiring trunk-held sticks as potential tools, thereby interfering with the trunk's use as a sensory organ to locate the targeted food. PMID:21876741

  14. ISS Update: Transit of Venus

    NASA Video Gallery

    ISS Update commentator Brandi Dean interviews Mario Runco, NASA astronaut, about Venus's transit across the sun on June 5, 2012. Questions? Ask us on Twitter @NASA_Johnson and include the hashtag #...

  15. Adolescent Urology and Transitional Care.

    PubMed

    Woodhouse, Christopher

    2015-11-01

    Babies with the major congenital anomalies of the genito-urinary tract have all-embracing holistic care during childhood. They require the same level of care in adult life. This is the role of transition and adolescent urology.

  16. Moved by a Rapid Transit

    NASA Astrophysics Data System (ADS)

    Bueter, C.

    2013-04-01

    Enticing by virtue of its predictability, historical utility, and spectacle, the transit of Venus is a niche event among astronomical phenomena. Though the value of a transit for scientific purposes is now diminished, the brief appearance of Venus silhouetted against the background of the Sun in 2004 moved the artistic community to celebrate the rare alignment. Artists of all ages combined old traditions with fresh technology to create a 21st-century tapestry of music, sculpture, paintings, glasswork, quilts, sky shows, and digital imagery. A full catalog of transit-related art generated over the centuries would feature the sampling of entries presented here and at the Moved by a Rapid Transit website.

  17. Insight in Obsessive Compulsive Disorder and Body Dysmorphic Disorder

    PubMed Central

    Eisen, Jane L.; Phillips, Katharine A.; Coles, Meredith E.; Rasmussen, Steven A.

    2006-01-01

    Similarities between obsessive-compulsive disorder (OCD) and body dysmorphic disorder (BDD) have been described in terms of clinical presentation, comorbidity rates, treatment response profiles, and other features. This is the first study to compare insight in OCD and BDD measuring global insight and numerous components of insight. We compared insight in 64 adult outpatients with DSM-IV OCD and 85 adult outpatients with DSM-IV BDD using a reliable and valid measure (the Brown Assessment of Beliefs Scale [BABS]). BDD patients had significantly poorer global insight than OCD patients. BDD patients also had significantly poorer insight on the following components of insight: conviction that the belief is accurate, perception of other’s views of the belief, explanation for differing views, willingness to consider that the belief is wrong, and recognition that the belief has a psychiatric/psychological cause. Poorer insight was significantly positively correlated with more severe symptoms of the disorder only in the BDD group. PMID:14671731

  18. Universal Keplerian state transition matrix

    NASA Technical Reports Server (NTRS)

    Shepperd, S. W.

    1985-01-01

    A completely general method for computing the Keplerian state transition matrix in terms of Goodyear's universal variables is presented. This includes a new scheme for solving Kepler's problem which is a necessary first step to computing the transition matrix. The Kepler problem is solved in terms of a new independent variable requiring the evaluation of only one transcendental function. Furthermore, this transcendental function may be conveniently evaluated by means of a Gaussian continued fraction.

  19. The Use of Social Media for Navigating the Transitions into and through the First Year of College

    ERIC Educational Resources Information Center

    Vaccaro, Annemarie; Adams, Sue K.; Kisler, Tiffani S.; Newman, Barbara M.

    2015-01-01

    Although the use of technology is at an all-time high among college students, research about how social media facilitates the transition to college is limited. This paper presents findings from two qualitative studies about the role of social media in fostering a sense of belonging. Narratives from 66 students offer insight into the distinct…

  20. Welcome to College? Developing a Richer Understanding of the Transition Process for Adult First Year Students Using Reflective Written Journals

    ERIC Educational Resources Information Center

    Risquez, Angelica; Moore, Sarah; Morley, Michael

    2008-01-01

    This study investigates the process of adjustment among adult learners by focusing on their own perceptions as they make the transition to higher education in an Irish setting, in order to gain a richer understanding about early university experience. The analysis of the journal-based reflections confirms existing insights about the complexity of…

  1. Crossing Over: The Lived Experiences of Clinical Laboratory Science Education Teachers as They Transition from Traditional to Online Instruction

    ERIC Educational Resources Information Center

    Veldkamp, Ruth B.

    2013-01-01

    A phenomenological study was undertaken to understand and describe the nature and meaning of the live experiences of faculty transition from traditional to teaching online clinical laboratory science courses. In order to gain insight into the lived experiences of faculty, in-depth interviews were conducted with 10 faculty members. The task of the…

  2. The major synthetic evolutionary transitions.

    PubMed

    Solé, Ricard

    2016-08-19

    Evolution is marked by well-defined events involving profound innovations that are known as 'major evolutionary transitions'. They involve the integration of autonomous elements into a new, higher-level organization whereby the former isolated units interact in novel ways, losing their original autonomy. All major transitions, which include the origin of life, cells, multicellular systems, societies or language (among other examples), took place millions of years ago. Are these transitions unique, rare events? Have they instead universal traits that make them almost inevitable when the right pieces are in place? Are there general laws of evolutionary innovation? In order to approach this problem under a novel perspective, we argue that a parallel class of evolutionary transitions can be explored involving the use of artificial evolutionary experiments where alternative paths to innovation can be explored. These 'synthetic' transitions include, for example, the artificial evolution of multicellular systems or the emergence of language in evolved communicating robots. These alternative scenarios could help us to understand the underlying laws that predate the rise of major innovations and the possibility for general laws of evolved complexity. Several key examples and theoretical approaches are summarized and future challenges are outlined.This article is part of the themed issue 'The major synthetic evolutionary transitions'. PMID:27431528

  3. The major synthetic evolutionary transitions.

    PubMed

    Solé, Ricard

    2016-08-19

    Evolution is marked by well-defined events involving profound innovations that are known as 'major evolutionary transitions'. They involve the integration of autonomous elements into a new, higher-level organization whereby the former isolated units interact in novel ways, losing their original autonomy. All major transitions, which include the origin of life, cells, multicellular systems, societies or language (among other examples), took place millions of years ago. Are these transitions unique, rare events? Have they instead universal traits that make them almost inevitable when the right pieces are in place? Are there general laws of evolutionary innovation? In order to approach this problem under a novel perspective, we argue that a parallel class of evolutionary transitions can be explored involving the use of artificial evolutionary experiments where alternative paths to innovation can be explored. These 'synthetic' transitions include, for example, the artificial evolution of multicellular systems or the emergence of language in evolved communicating robots. These alternative scenarios could help us to understand the underlying laws that predate the rise of major innovations and the possibility for general laws of evolved complexity. Several key examples and theoretical approaches are summarized and future challenges are outlined.This article is part of the themed issue 'The major synthetic evolutionary transitions'.

  4. Transitions in turbulent rotating convection

    NASA Astrophysics Data System (ADS)

    Rajaei, Hadi; Alards, Kim; Kunnen, Rudie; Toschi, Federico; Clercx, Herman; Fluid Dynamics Lab Team

    2015-11-01

    This study aims to explore the flow transition from one state to the other in rotating Rayleigh-Bènard convection using Lagrangian acceleration statistics. 3D particle tracking velocimetry (3D-PTV) is employed in a water-filled cylindrical tank of equal height and diameter. The measurements are performed at the center and close to the top plate at a Rayleigh number Ra = 1.28e9 and Prandtl number Pr = 6.7 for different rotation rates. In parallel, direct numerical simulation (DNS) has been performed to provide detailed information on the boundary layers. We report the acceleration pdfs for different rotation rates and show how the transition from weakly to strongly rotating Rayleigh-Bènard affects the acceleration pdfs in the bulk and boundary layers. We observe that the shapes of the acceleration PDFs as well as the isotropy in the cell center are largely unaffected while crossing the transition point. However, acceleration pdfs at the top show a clear change at the transition point. Using acceleration pdfs and DNS data, we show that the transition between turbulent states is actually a boundary layer transition between Prandtl-Blasius type (typical of non-rotating convection) and Ekman type.

  5. Modelling the transitional boundary layer

    NASA Technical Reports Server (NTRS)

    Narasimha, R.

    1990-01-01

    Recent developments in the modelling of the transition zone in the boundary layer are reviewed (the zone being defined as extending from the station where intermittency begins to depart from zero to that where it is nearly unity). The value of using a new non-dimensional spot formation rate parameter, and the importance of allowing for so-called subtransitions within the transition zone, are both stressed. Models do reasonably well in constant pressure 2-dimensional flows, but in the presence of strong pressure gradients further improvements are needed. The linear combination approach works surprisingly well in most cases, but would not be so successful in situations where a purely laminar boundary layer would separate but a transitional one would not. Intermittency-weighted eddy viscosity methods do not predict peak surface parameters well without the introduction of an overshooting transition function whose connection with the spot theory of transition is obscure. Suggestions are made for further work that now appears necessary for developing improved models of the transition zone.

  6. Clinicians’ views on improving inter-organizational care transitions

    PubMed Central

    2013-01-01

    Background Patients with complex health conditions frequently require care from multiple providers and are particularly vulnerable to poorly executed transitions from one healthcare setting to another. Poorly executed care transitions can result in negative patient outcomes (e.g. medication errors, delays in treatment) and increased healthcare spending due to re-hospitalization or emergency room visits by patients. Little is known about care transitions from acute care to complex continuing care and rehabilitation settings. Thus, a qualitative study was undertaken to explore clinicians’ perceptions of strategies aimed at improving patient care transitions from acute care hospitals to complex continuing care and rehabilitation healthcare organizations. Methods A qualitative study using semi-structured interviews was conducted with clinicians employed at two selected healthcare facilities: an acute care hospital and a complex continuing care/rehabilitation organization, respectively. Analysis of the transcripts involved the creation of a coding schema using the content analyses outlined by Ryan and Bernard. In total, 31 interviews were conducted with clinicians at the participating study sites. Results Three themes emerged from the data to delineate what study participants described as strategies to ensure quality inter-organizational transitions of patients transferred from acute care to the complex continuing care and rehabilitation hospital. These themes are: 1) communicating more effectively; 2) being vigilant around the patients’ readiness for transfer and care needs; and 3) documenting more accurately and completely in the patient transfer record. Conclusion Our study provides insights from the perspectives of multiple clinicians that have important implications for health care leaders and clinicians in their efforts to enhance inter-organizational care transitions. Of particular importance is the need to have a collective and collaborative approach amongst

  7. Correlates of Insight among Youth with Obsessive-Compulsive Disorder

    ERIC Educational Resources Information Center

    Lewin, Adam B.; Bergman, R. Lindsey; Peris, Tara S.; Chang, Susanna; McCracken, James T.; Piacentini, John

    2010-01-01

    Background: Individuals with Obsessive-Compulsive Disorder (OCD) may lack insight into the irrational nature of their symptoms. Among adults with OCD, poor insight has been linked to greater symptom severity, increased likelihood of comorbid symptoms, lower adaptive functioning, and worse treatment outcomes. Parallel work regarding insight among…

  8. Career Transitions for Faculty Members committed to Undergraduate Neuroscience Education.

    PubMed

    Dunbar, Gary L

    2015-01-01

    This article highlights some of the critical issues that were discussed during a breakout session on career transitions at the 2014 Faculty for Undergraduate Neuroscience (FUN) Workshop at Ithaca College on Undergraduate Neuroscience Education: Challenges and Solutions in Creating and Sustaining Programs. Topics included: (1) transitioning from graduate school or a postdoc position to an assistant professor position; (2) preparing for promotion and tenure decisions; (3) balancing teaching, research, and service during a career in academics; (4) exploring alternative career options, including moving to another institution, taking on an administrative position, and working in industry; and (5) deciding when and how to retire. Much of the discussion focused on special challenges that women and minorities face in the academic environment. Participants offered valuable insights and suggestions for helping new faculty members prepare for reappointment, promotion, and tenure decisions, including utilizing networking connections within FUN for letters of support and collaborative opportunities. These networking opportunities were also valued by participants who were in rather unique positions, such as transitioning from a purely administrative role back to a regular faculty position or handling the extra burden of being a chair or program director with essentially the same research and grant-writing expectations of a regular faculty member. The session proved to be enlightening for most participants and though several questions and concerns remained unanswered, several ideas and insights were shared by the participants and a sense of empathy for the unique circumstances many of the participants were experiencing provided an atmosphere of comradery and support that often emanates from these FUN workshop sessions.

  9. Career Transitions for Faculty Members committed to Undergraduate Neuroscience Education.

    PubMed

    Dunbar, Gary L

    2015-01-01

    This article highlights some of the critical issues that were discussed during a breakout session on career transitions at the 2014 Faculty for Undergraduate Neuroscience (FUN) Workshop at Ithaca College on Undergraduate Neuroscience Education: Challenges and Solutions in Creating and Sustaining Programs. Topics included: (1) transitioning from graduate school or a postdoc position to an assistant professor position; (2) preparing for promotion and tenure decisions; (3) balancing teaching, research, and service during a career in academics; (4) exploring alternative career options, including moving to another institution, taking on an administrative position, and working in industry; and (5) deciding when and how to retire. Much of the discussion focused on special challenges that women and minorities face in the academic environment. Participants offered valuable insights and suggestions for helping new faculty members prepare for reappointment, promotion, and tenure decisions, including utilizing networking connections within FUN for letters of support and collaborative opportunities. These networking opportunities were also valued by participants who were in rather unique positions, such as transitioning from a purely administrative role back to a regular faculty position or handling the extra burden of being a chair or program director with essentially the same research and grant-writing expectations of a regular faculty member. The session proved to be enlightening for most participants and though several questions and concerns remained unanswered, several ideas and insights were shared by the participants and a sense of empathy for the unique circumstances many of the participants were experiencing provided an atmosphere of comradery and support that often emanates from these FUN workshop sessions. PMID:26240524

  10. Phase Transitions and Gravitational Collapse

    NASA Astrophysics Data System (ADS)

    Gentile, Nicholas A.

    1994-01-01

    Results are presented for numerical calculations of gravitational collapses and explosions. Two effects are studied. The first involves aspects of the numerical models used in almost all current gravitational collapse calculations. The second involves phase transitions in the equation of state of dense matter. A (1+1) dimensional general relativistic hydrodynamics code was constructed to investigate both effects. A modification of standard artificial viscosity methods was developed. This extended both the tensor artificial viscosity formulation and the artificial heat conduction formulation to the general relativistic regime. This method shows better results for collapse calculations than the standard scalar artificial viscosity. Numerical collapse calculations were also examined with respect to the number of zones used in the model. These calculations suggest that the number of zones used in current supernova calculations may be insufficient, and that the more sophisticated artificial viscosity methods used may be useful in future core collapse investigations. The second effect studied by this thesis is the impact of phase transitions in dense matter on the results of core collapse in Type 2 supernovae. Two different phase transitions were investigated. The QCD phase transition embodies the prediction of quantum chromodynamics that at high density the constituents of baryonic matter will be free quarks and gluons. The effects on the shock wave formed by core collapse and bounce is studied for various phase transitions. We find that some of the phase transitions modeled significantly increase the shock strength. The second phase transition we study is one from a normal hadronic gas to Q matter. Q matter is a phase of dense baryonic matter that is motivated by soliton models for the nucleus. It has been used to model zero temperature dense matter in static stellar objects, here we extend it to finite temperature, determine the phase transitions with hadronic matter

  11. Transition boiling heat transfer and the film transition regime

    NASA Technical Reports Server (NTRS)

    Ramilison, J. M.; Lienhard, J. H.

    1987-01-01

    The Berenson (1960) flat-plate transition-boiling experiment has been recreated with a reduced thermal resistance in the heater, and an improved access to those portions of the transition boiling regime that have a steep negative slope. Tests have been made in Freon-113, acetone, benzene, and n-pentane boiling on horizontal flat copper heaters that have been mirror-polished, 'roughened', or teflon-coated. The resulting data reproduce and clarify certain features observed by Berenson: the modest surface finish dependence of boiling burnout, and the influence of surface chemistry on both the minimum heat flux and the mode of transition boiling, for example. A rational scheme of correlation yields a prediction of the heat flux in what Witte and Lienhard (1982) previously identified as the 'film-transition boiling' region. It is also shown how to calculate the heat flux at the boundary between the pure-film, and the film-transition, boiling regimes, as a function of the advancing contact angle.

  12. Differential Scanning Fluorimetry provides high throughput data on silk protein transitions.

    PubMed

    Vollrath, Fritz; Hawkins, Nick; Porter, David; Holland, Chris; Boulet-Audet, Maxime

    2014-01-01

    Here we present a set of measurements using Differential Scanning Fluorimetry (DSF) as an inexpensive, high throughput screening method to investigate the folding of silk protein molecules as they abandon their first native melt conformation, dehydrate and denature into their final solid filament conformation. Our first data and analyses comparing silks from spiders, mulberry and wild silkworms as well as reconstituted 'silk' fibroin show that DSF can provide valuable insights into details of silk denaturation processes that might be active during spinning. We conclude that this technique and technology offers a powerful and novel tool to analyse silk protein transitions in detail by allowing many changes to the silk solutions to be tested rapidly with microliter scale sample sizes. Such transition mechanisms will lead to important generic insights into the folding patterns not only of silks but also of other fibrous protein (bio)polymers.

  13. Differential Scanning Fluorimetry provides high throughput data on silk protein transitions.

    PubMed Central

    Vollrath, Fritz; Hawkins, Nick; Porter, David; Holland, Chris; Boulet-Audet, Maxime

    2014-01-01

    Here we present a set of measurements using Differential Scanning Fluorimetry (DSF) as an inexpensive, high throughput screening method to investigate the folding of silk protein molecules as they abandon their first native melt conformation, dehydrate and denature into their final solid filament conformation. Our first data and analyses comparing silks from spiders, mulberry and wild silkworms as well as reconstituted ‘silk' fibroin show that DSF can provide valuable insights into details of silk denaturation processes that might be active during spinning. We conclude that this technique and technology offers a powerful and novel tool to analyse silk protein transitions in detail by allowing many changes to the silk solutions to be tested rapidly with microliter scale sample sizes. Such transition mechanisms will lead to important generic insights into the folding patterns not only of silks but also of other fibrous protein (bio)polymers. PMID:25004800

  14. Differential Scanning Fluorimetry provides high throughput data on silk protein transitions.

    NASA Astrophysics Data System (ADS)

    Vollrath, Fritz; Hawkins, Nick; Porter, David; Holland, Chris; Boulet-Audet, Maxime

    2014-07-01

    Here we present a set of measurements using Differential Scanning Fluorimetry (DSF) as an inexpensive, high throughput screening method to investigate the folding of silk protein molecules as they abandon their first native melt conformation, dehydrate and denature into their final solid filament conformation. Our first data and analyses comparing silks from spiders, mulberry and wild silkworms as well as reconstituted `silk' fibroin show that DSF can provide valuable insights into details of silk denaturation processes that might be active during spinning. We conclude that this technique and technology offers a powerful and novel tool to analyse silk protein transitions in detail by allowing many changes to the silk solutions to be tested rapidly with microliter scale sample sizes. Such transition mechanisms will lead to important generic insights into the folding patterns not only of silks but also of other fibrous protein (bio)polymers.

  15. 'I am a mother': young women's negotiation of femininity and risk in the transition to adulthood.

    PubMed

    Graham, Lauren

    2016-01-01

    In studies of sexual risk behaviour among youth, the role of dominant conceptions of masculinity and femininity has received increasing attention. However, where research has sought to explore femininity, it has predominantly focused on adolescent girls. This paper departs from previous research by offering insights into how young women negotiate their femininity as they transition from adolescence to adulthood and encounter changing social contexts. Drawing on data from ethnographic enquiry, it argues that as young women transition out of school and into emerging adulthood, their options for negotiating different types of femininity become constrained, with consequences for engagement in sexual risk behaviours. This may to some extent explain why in some South African contexts older young women are more vulnerable to HIV infection than adolescent girls. The paper offer insights into future prospects for youth development programming seeking to reduce young women's vulnerability to risk.

  16. Gene regulation in amphioxus: An insight from transgenic studies in amphioxus and vertebrates.

    PubMed

    Kozmikova, Iryna; Kozmik, Zbynek

    2015-12-01

    Cephalochordates, commonly known as amphioxus or lancelets, are the most basal subphylum of chordates. Cephalochordates are thus key to understanding the origin of vertebrates and molecular mechanisms underlying vertebrate evolution. The evolution of developmental control mechanisms during invertebrate-to-vertebrate transition involved not only gene duplication events, but also specific changes in spatial and temporal expression of many genes. To get insight into the spatiotemporal regulation of gene expression during invertebrate-to-vertebrate transition, functional studies of amphioxus gene regulatory elements are highly warranted. Here, we review transgenic studies performed in amphioxus and vertebrates using promoters and enhancers derived from the genome of Branchiostoma floridae. We describe the current methods of transgenesis in amphioxus, provide evidence of Tol2 transposon-generated transgenic embryos of Branchiostoma lanceolatum and discuss possible future directions. We envision that comparative transgenic analysis of gene regulatory sequences in the context of amphioxus and vertebrate embryos will likely provide an important mechanistic insight into the evolution of vertebrate body plan.

  17. Gene regulation in amphioxus: An insight from transgenic studies in amphioxus and vertebrates.

    PubMed

    Kozmikova, Iryna; Kozmik, Zbynek

    2015-12-01

    Cephalochordates, commonly known as amphioxus or lancelets, are the most basal subphylum of chordates. Cephalochordates are thus key to understanding the origin of vertebrates and molecular mechanisms underlying vertebrate evolution. The evolution of developmental control mechanisms during invertebrate-to-vertebrate transition involved not only gene duplication events, but also specific changes in spatial and temporal expression of many genes. To get insight into the spatiotemporal regulation of gene expression during invertebrate-to-vertebrate transition, functional studies of amphioxus gene regulatory elements are highly warranted. Here, we review transgenic studies performed in amphioxus and vertebrates using promoters and enhancers derived from the genome of Branchiostoma floridae. We describe the current methods of transgenesis in amphioxus, provide evidence of Tol2 transposon-generated transgenic embryos of Branchiostoma lanceolatum and discuss possible future directions. We envision that comparative transgenic analysis of gene regulatory sequences in the context of amphioxus and vertebrate embryos will likely provide an important mechanistic insight into the evolution of vertebrate body plan. PMID:26094865

  18. INSIGHT AGONISTES: A READING OF SOPHOCLES'S OEDIPUS THE KING.

    PubMed

    Mahon, Eugene J

    2015-07-01

    In this reading of Sophocles's Oedipus the King, the author suggests that insight can be thought of as the main protagonist of the tragedy. He personifies this depiction of insight, calling it Insight Agonistes, as if it were the sole conflicted character on the stage, albeit masquerading at times as several other characters, including gods, sphinxes, and oracles. This psychoanalytic reading of the text lends itself to an analogy between psychoanalytic process and Sophocles's tragic hero. The author views insight as always transgressing against, always at war with a conservative, societal, or intrapsychic chorus of structured elements. A clinical vignette is presented to illustrate this view of insight.

  19. INSIGHT AGONISTES: A READING OF SOPHOCLES'S OEDIPUS THE KING.

    PubMed

    Mahon, Eugene J

    2015-07-01

    In this reading of Sophocles's Oedipus the King, the author suggests that insight can be thought of as the main protagonist of the tragedy. He personifies this depiction of insight, calling it Insight Agonistes, as if it were the sole conflicted character on the stage, albeit masquerading at times as several other characters, including gods, sphinxes, and oracles. This psychoanalytic reading of the text lends itself to an analogy between psychoanalytic process and Sophocles's tragic hero. The author views insight as always transgressing against, always at war with a conservative, societal, or intrapsychic chorus of structured elements. A clinical vignette is presented to illustrate this view of insight. PMID:26198605

  20. Illness insight and neurophysiological error-processing deficits in schizophrenia.

    PubMed

    Kansal, Vinay; Patriciu, Iulia; Kiang, Michael

    2014-06-01

    Impaired illness insight in schizophrenia is associated with non-adherence and worse outcomes. Schizophrenia patients also exhibit error-monitoring deficits, which have been proposed to cause poor insight. To test this hypothesis, we examined whether schizophrenia patients' deficits in neurophysiological error-monitoring indices, the error-related negativity (ERN) and error positivity (Pe) event-related potential (ERP) amplitudes, are associated with impaired insight. ERPs were recorded in 18 schizophrenia patients and 18 normal comparison participants during a Stroop task. Patients' subnormal ERN and Pe amplitudes did not correlate with insight, suggesting that impaired insight in schizophrenia stems from neurocognitive mechanisms other than deficient error monitoring.

  1. The Transition to Collisionless Ion-temperature-gradient-driven Plasma Turbulence: A Dynamical Systems Approach

    SciTech Connect

    R.A. Kolesnikov; J.A. Krommes

    2004-10-21

    The transition to collisionless ion-temperature-gradient-driven plasma turbulence is considered by applying dynamical systems theory to a model with ten degrees of freedom. Study of a four-dimensional center manifold predicts a ''Dimits shift'' of the threshold for turbulence due to the excitation of zonal flows and establishes the exact value of that shift in terms of physical parameters. For insight into fundamental physical mechanisms, the method provides a viable alternative to large simulations.

  2. Effect of handle length and microsphere size on transition kinetics in single-molecule experiments.

    PubMed

    Chang, Jen-Chien; de Messieres, Michel; La Porta, Arthur

    2013-01-01

    When subject to constant tension, a DNA or RNA hairpin will typically make abrupt transitions between the open and closed state. Although the transition kinetics are an intrinsic property of the molecule, the transition rates measured in single-molecule experiments can be influenced by the configuration of the measurement system. We investigate the transition kinetics for a DNA hairpin held under constant force by an optical trap as a function of microsphere size and double-stranded DNA handle length. We find the apparent transition lifetime cannot be expressed as a function of the drag coefficient of the microsphere alone or as a function of time scales relevant to the optical trap. The apparent transition lifetime is found to be a linear function of the factor β(eff)·α(handle), where β(eff) is the effective drag coefficient of the microsphere near the surface and α(handle) is the stiffness of the DNA tether. The results provide insight into the perturbation to the hairpin transition kinetics due to experimental configuration and guidance for designing single-molecule experiments which determine the intrinsic molecular kinetics.

  3. Bridging analytical approaches for low-carbon transitions

    NASA Astrophysics Data System (ADS)

    Geels, Frank W.; Berkhout, Frans; van Vuuren, Detlef P.

    2016-06-01

    Low-carbon transitions are long-term multi-faceted processes. Although integrated assessment models have many strengths for analysing such transitions, their mathematical representation requires a simplification of the causes, dynamics and scope of such societal transformations. We suggest that integrated assessment model-based analysis should be complemented with insights from socio-technical transition analysis and practice-based action research. We discuss the underlying assumptions, strengths and weaknesses of these three analytical approaches. We argue that full integration of these approaches is not feasible, because of foundational differences in philosophies of science and ontological assumptions. Instead, we suggest that bridging, based on sequential and interactive articulation of different approaches, may generate a more comprehensive and useful chain of assessments to support policy formation and action. We also show how these approaches address knowledge needs of different policymakers (international, national and local), relate to different dimensions of policy processes and speak to different policy-relevant criteria such as cost-effectiveness, socio-political feasibility, social acceptance and legitimacy, and flexibility. A more differentiated set of analytical approaches thus enables a more differentiated approach to climate policy making.

  4. Transition to turbulence in Taylor-Couette ferrofluidic flow.

    PubMed

    Altmeyer, Sebastian; Do, Younghae; Lai, Ying-Cheng

    2015-06-12

    It is known that in classical fluids turbulence typically occurs at high Reynolds numbers. But can turbulence occur at low Reynolds numbers? Here we investigate the transition to turbulence in the classic Taylor-Couette system in which the rotating fluids are manufactured ferrofluids with magnetized nanoparticles embedded in liquid carriers. We find that, in the presence of a magnetic field transverse to the symmetry axis of the system, turbulence can occur at Reynolds numbers that are at least one order of magnitude smaller than those in conventional fluids. This is established by extensive computational ferrohydrodynamics through a detailed investigation of transitions in the flow structure, and characterization of behaviors of physical quantities such as the energy, the wave number, and the angular momentum through the bifurcations. A finding is that, as the magnetic field is increased, onset of turbulence can be determined accurately and reliably. Our results imply that experimental investigation of turbulence may be feasible by using ferrofluids. Our study of transition to and evolution of turbulence in the Taylor-Couette ferrofluidic flow system provides insights into the challenging problem of turbulence control.

  5. A multinomial choice model approach for dynamic driver vision transitions.

    PubMed

    Huang, Shih-Hsuan; Wong, Jinn-Tsai

    2015-01-01

    Exploring the continual process of drivers allocating their attention under varying conditions could be vital for preventing motor vehicle crashes. This study aims to model visual behaviors and to estimate the effects of various contributing factors on driver's vision transitions. A visual attention allocation framework, based on certain contributing attributes related to driving tasks and environmental conditions, has been developed. The associated logit type models for determining driver choices for focal points were successfully formulated and estimated by using naturalistic glance data from the 100-car event database. The results offer insights into driver visual behavior and patterns of visual attention allocation. The three focal points that drivers most frequently rely on and glance at are the forward, left and rear view mirror. The sample drivers were less likely to demonstrate troublesome transition patterns, particularly in mentally demanding situations. Additionally, instead of shifting vision directly between two non-forward focal points, the sample drivers frequently had an intermediate forward glance. Thus, seemingly unrelated paths could be grouped into explanatory patterns of driver attention allocation. Finally, in addition to the vision-transition patterns, the potential pitfalls of such patterns and possible countermeasures to improving safety are illustrated, focusing on situations when drivers are distracted, traveling at high speeds and approaching intersections.

  6. Transition to turbulence in Taylor-Couette ferrofluidic flow

    PubMed Central

    Altmeyer, Sebastian; Do, Younghae; Lai, Ying-Cheng

    2015-01-01

    It is known that in classical fluids turbulence typically occurs at high Reynolds numbers. But can turbulence occur at low Reynolds numbers? Here we investigate the transition to turbulence in the classic Taylor-Couette system in which the rotating fluids are manufactured ferrofluids with magnetized nanoparticles embedded in liquid carriers. We find that, in the presence of a magnetic field transverse to the symmetry axis of the system, turbulence can occur at Reynolds numbers that are at least one order of magnitude smaller than those in conventional fluids. This is established by extensive computational ferrohydrodynamics through a detailed investigation of transitions in the flow structure, and characterization of behaviors of physical quantities such as the energy, the wave number, and the angular momentum through the bifurcations. A finding is that, as the magnetic field is increased, onset of turbulence can be determined accurately and reliably. Our results imply that experimental investigation of turbulence may be feasible by using ferrofluids. Our study of transition to and evolution of turbulence in the Taylor-Couette ferrofluidic flow system provides insights into the challenging problem of turbulence control. PMID:26065572

  7. Simulating Exoplanet Transit and Eclipse Observations with JWST

    NASA Technical Reports Server (NTRS)

    Greene, Tom

    2011-01-01

    The James Webb Space Telescope (JWST) will be a nearly ideal machine for acquiring the transmission and emission spectra of transiting exoplanets over its large wavelength range 0.7 - 28 microns. The NIRSpec, NIRCam, nTFI, and MIRI instruments will have spectroscopic capabilities that span spectral resolutions from 20 - 3000 and can cover up to 2 - 3 octaves in wavelength simultaneously. This will allow observing multiple molecular features at once, facilitating the separation of atmospheric temperature and abundance effects on spectra. Many transiting planets will also be able to be observed with both transmission and eclipse spectroscopy, providing further insights and constraints on planetary thermal structures and energy transport. Simulated JWST spectra of planets ranging from mini-Neptunes to gas giants will be presented. These simulations include planets ranging from mini-Neptunes to gas giants will be presented. These simulations include current best estimates of actual instrument throughput, resolution, spectral range, systematic noise, and random noise terms. They show that JWST will be able to determine the atmospheric parameters of a wide variety of planets, often when observing only one or a few transit or eclipse event sequences. The thermal emissions of rocky super-Earths will also be quickly detectable via mid-IR eclipse observations if such planets are found around nearby M star hosts beforehand.

  8. Transition to turbulence in Taylor-Couette ferrofluidic flow.

    PubMed

    Altmeyer, Sebastian; Do, Younghae; Lai, Ying-Cheng

    2015-01-01

    It is known that in classical fluids turbulence typically occurs at high Reynolds numbers. But can turbulence occur at low Reynolds numbers? Here we investigate the transition to turbulence in the classic Taylor-Couette system in which the rotating fluids are manufactured ferrofluids with magnetized nanoparticles embedded in liquid carriers. We find that, in the presence of a magnetic field transverse to the symmetry axis of the system, turbulence can occur at Reynolds numbers that are at least one order of magnitude smaller than those in conventional fluids. This is established by extensive computational ferrohydrodynamics through a detailed investigation of transitions in the flow structure, and characterization of behaviors of physical quantities such as the energy, the wave number, and the angular momentum through the bifurcations. A finding is that, as the magnetic field is increased, onset of turbulence can be determined accurately and reliably. Our results imply that experimental investigation of turbulence may be feasible by using ferrofluids. Our study of transition to and evolution of turbulence in the Taylor-Couette ferrofluidic flow system provides insights into the challenging problem of turbulence control. PMID:26065572

  9. Structural insights into microtubule doublet interactions inaxonemes

    SciTech Connect

    Downing, Kenneth H.; Sui, Haixin

    2007-06-06

    Coordinated sliding of microtubule doublets, driven by dynein motors, produces periodic beating of the axoneme. Recent structural studies of the axoneme have used cryo-electron tomography to reveal new details of the interactions among some of the multitude of proteins that form the axoneme and regulate its movement. Connections among the several sets of dyneins, in particular, suggest ways in which their actions may be coordinated. Study of the molecular architecture of isolated doublets has provided a structural basis for understanding the doublet's mechanical properties that are related to the bending of the axoneme, and has also offered insight into its potential role in the mechanism of dynein activity regulation.

  10. Is Humanity Doomed? Insights from Astrobiology

    NASA Astrophysics Data System (ADS)

    Baum, Seth D.

    2010-02-01

    Astrobiology, the study of life in the universe, offers profound insights into human sustainability. However, astrobiology is commonly neglected in sustainability research. This paper develops three topics connecting astrobiology to sustainability: constraints on what zones in the universe are habitable, the absence of observations of extraterrestrial civilizations, and the physical fate of the universe. These topics have major implications for our thinking and action on sustainability. While we may not be doomed, we must take certain actions to sustain ourselves in this universe. The topics also suggest that our current sustainability efforts may be of literally galactic importance.

  11. Insights into the functional biology of schistosomes

    PubMed Central

    2011-01-01

    The need to discover new treatments for human schistosomiasis has been an important driver for molecular research on schistosomes, a major breakthrough being the publication of the Schistosoma mansoni and Schistosoma japonicum genomes in 2009. This 'Primer' considers recent advances in the understanding of schistosome biology by providing a snapshot of selected areas of contemporary functional schistosome research, including that on the genome, the tegument, cell signalling and developmental biology, offering biologists a valuable insight into the life of these fascinating parasites at the basic and molecular level. PMID:22013990

  12. Treatment of candidiasis: insights from host genetics.

    PubMed

    Delsing, Corine E; Bleeker-Rovers, Chantal P; Kullberg, Bart-Jan; Netea, Mihai G

    2012-08-01

    Candida species are major causes of mucosal and invasive infections, leading to substantial morbidity and mortality. Despite the development of new classes of antifungal drugs, mortality in patients with systemic candidiasis remains high. Host-Candida interaction plays an important role in effective elimination of the pathogen. Genetic studies have rendered important insights into antifungal host defense and have identified potential targets for adjunctive therapy. In this article, the authors review the genetic variations in the host defense to Candida and their implications for the treatment of mucosal and systemic candidiasis.

  13. The new insights into cadmium sensing

    PubMed Central

    Chmielowska-Bąk, Jagna; Gzyl, Jarosław; Rucińska-Sobkowiak, Renata; Arasimowicz-Jelonek, Magdalena; Deckert, Joanna

    2014-01-01

    Cadmium (Cd) is non-essential heavy metal, which in excess, exhibits deleterious effects to the most of the organisms. Mobilization of defense mechanisms against this toxic agent requires rapid activation of signaling pathways. The article presents recent advances in the research concerning cadmium signal transduction in plants. New insights into the involvement of reactive oxygen species (ROS), nitric oxide (NO), plant growth regulators, and Cd-induced protein modifications are reviewed. Moreover, the role of recently recognized Cd-associated signal elements, including micro RNAs and several cis- and trans-acting elements is discussed. PMID:24917871

  14. Botulinum neurotoxins: genetic, structural and mechanistic insights.

    PubMed

    Rossetto, Ornella; Pirazzini, Marco; Montecucco, Cesare

    2014-08-01

    Botulinum neurotoxins (BoNTs) are produced by anaerobic bacteria of the genus Clostridium and cause a persistent paralysis of peripheral nerve terminals, which is known as botulism. Neurotoxigenic clostridia belong to six phylogenetically distinct groups and produce more than 40 different BoNT types, which inactivate neurotransmitter release owing to their metalloprotease activity. In this Review, we discuss recent studies that have improved our understanding of the genetics and structure of BoNT complexes. We also describe recent insights into the mechanisms of BoNT entry into the general circulation, neuronal binding, membrane translocation and neuroparalysis.

  15. Electronic transitions of cobalt monoboride

    NASA Astrophysics Data System (ADS)

    Ng, Y. W.; Pang, H. F.; Cheung, A. S.-C.

    2011-11-01

    Electronic transition spectrum of cobalt monoboride (CoB) in the visible region between 495 and 560 nm has been observed and analyzed using laser-induced fluorescence spectroscopy. CoB molecule was produced by the reaction of laser-ablated cobalt atom and diborane (B2H6) seeded in argon. Fifteen vibrational bands with resolved rotational structure have been recorded, which included transitions of both Co10B and Co11B isotopic species. Our analysis showed that the observed transition bands are ΔΩ = 0 transitions with Ω″ = 2 and Ω″ = 3 lower states. Four transition systems have been assigned, namely, the [18.1]3Π2-X3Δ2, the [18.3]3Φ3-X3Δ3, the [18.6]3- X3Δ3, and the [19.0]2-X3Δ2 systems. The bond length, ro, of the X 3Δ3 state of CoB is determined to be 1.705 Å. The observed rotational lines showed unresolved hyperfine structure arising from the nuclei, which conforms to the Hund's case (aβ) coupling scheme. This work represents the first experimental investigation of the CoB spectrum.

  16. Transitional care in pediatric urology.

    PubMed

    Lambert, Sarah M

    2015-04-01

    The transition from childhood to adolescence and into adulthood occurs as a natural component of human development. As children progress through school and gain independence, health care practitioners must facilitate a parallel transition from pediatric to adult providers. Modern medicine has succeeded in extending the life expectancy for many children with complex conditions, and adult providers are participating in their medical care through adulthood. Transitioning pediatric urology care to adult urology care is unique to every individual and his or her underlying condition, while the transition process is universal. The objectives of all pediatric urologists include preservation of the kidneys and lower urinary tracts, safe urine storage, safe urine drainage, urinary continence, fertility, sexual function, and genital cosmesis. For some children, these objectives can be attained during childhood, while other children require lifelong maintenance and management. Children with posterior urethral valves, exstrophy-epispadias complex, cloaca, vesicoureteral reflux, neurogenic bladder, disorders of sex development, cancer, hypospadias, nephrolithiasis, undescended testes, varicoceles, ureteropelvic junction obstruction, solitary kidney, and upper tract anomalies all require long-term evaluation and management. The obstacles of altering a patient and caregiver paradigm, locating adult urologists with special expertise, coordinating care with other adult specialties such as nephrology, and navigating the adult health care environment can impede the transition process.

  17. The major synthetic evolutionary transitions

    PubMed Central

    Solé, Ricard

    2016-01-01

    Evolution is marked by well-defined events involving profound innovations that are known as ‘major evolutionary transitions'. They involve the integration of autonomous elements into a new, higher-level organization whereby the former isolated units interact in novel ways, losing their original autonomy. All major transitions, which include the origin of life, cells, multicellular systems, societies or language (among other examples), took place millions of years ago. Are these transitions unique, rare events? Have they instead universal traits that make them almost inevitable when the right pieces are in place? Are there general laws of evolutionary innovation? In order to approach this problem under a novel perspective, we argue that a parallel class of evolutionary transitions can be explored involving the use of artificial evolutionary experiments where alternative paths to innovation can be explored. These ‘synthetic’ transitions include, for example, the artificial evolution of multicellular systems or the emergence of language in evolved communicating robots. These alternative scenarios could help us to understand the underlying laws that predate the rise of major innovations and the possibility for general laws of evolved complexity. Several key examples and theoretical approaches are summarized and future challenges are outlined. This article is part of the themed issue ‘The major synthetic evolutionary transitions’. PMID:27431528

  18. Major transitions in human evolution

    PubMed Central

    Foley, Robert A.; Martin, Lawrence; Mirazón Lahr, Marta; Stringer, Chris

    2016-01-01

    Evolutionary problems are often considered in terms of ‘origins', and research in human evolution seen as a search for human origins. However, evolution, including human evolution, is a process of transitions from one state to another, and so questions are best put in terms of understanding the nature of those transitions. This paper discusses how the contributions to the themed issue ‘Major transitions in human evolution’ throw light on the pattern of change in hominin evolution. Four questions are addressed: (1) Is there a major divide between early (australopithecine) and later (Homo) evolution? (2) Does the pattern of change fit a model of short transformations, or gradual evolution? (3) Why is the role of Africa so prominent? (4) How are different aspects of adaptation—genes, phenotypes and behaviour—integrated across the transitions? The importance of developing technologies and approaches and the enduring role of fieldwork are emphasized. This article is part of the themed issue ‘Major transitions in human evolution’. PMID:27298461

  19. Electronic Transitions of Ruthenium Monoxide

    NASA Astrophysics Data System (ADS)

    Wang, Na; Ng, Y. W.; Cheung, A. S.-C.

    2013-06-01

    The electronic transition spectrum of ruthenium monoxide (RuO) molecule in the spectral region between 545nm to 640nm has been recorded and analyzed using laser ablation/reaction free-jet expansion and laser induced fluorescence spectroscopy. The RuO molecule was produced by reacting laser- ablated ruthenium atoms with N_{2}O seeded in argon. Nine vibrational bands were recorded and they are identified to be belonging to four electronic transition systems, namely the [18.1]Ω = 4 - X^{5} Δ_4 transition, [16.0]^{5} Φ_5 - X^{5} Δ_4 transition, [18.1]Ω = 3 - X^{5} Δ_3, and [15.8] ^{5} Φ_4 - X^{5} Δ_3 transition. RuO has been determined to have a X^{5} Δ_4 ground state. A least squares fit of the measured rotational lines yielded molecular constants for the ground and the low-lying electronic states. A molecular orbital energy level diagram has been used to help with the assignment of the observed electronic states.

  20. Major transitions in human evolution.

    PubMed

    Foley, Robert A; Martin, Lawrence; Mirazón Lahr, Marta; Stringer, Chris

    2016-07-01

    Evolutionary problems are often considered in terms of 'origins', and research in human evolution seen as a search for human origins. However, evolution, including human evolution, is a process of transitions from one state to another, and so questions are best put in terms of understanding the nature of those transitions. This paper discusses how the contributions to the themed issue 'Major transitions in human evolution' throw light on the pattern of change in hominin evolution. Four questions are addressed: (1) Is there a major divide between early (australopithecine) and later (Homo) evolution? (2) Does the pattern of change fit a model of short transformations, or gradual evolution? (3) Why is the role of Africa so prominent? (4) How are different aspects of adaptation-genes, phenotypes and behaviour-integrated across the transitions? The importance of developing technologies and approaches and the enduring role of fieldwork are emphasized.This article is part of the themed issue 'Major transitions in human evolution'. PMID:27298461

  1. Stigma as a predictor of insight in schizophrenia.

    PubMed

    Pruß, Linda; Wiedl, Karl Heinz; Waldorf, Manuel

    2012-07-30

    Insight in schizophrenia can be seen as a multifactorial phenomenon. Although multifactorial pathways have also been suggested for insight formation, motivational explanations have rarely been tested. The present study explores stigma as one possible determinant of a motivated lack of insight in integrated models of insight formation. It examines the contribution of socio-demographic and clinical variables, neurocognitive functions, symptoms, and stigma to the prediction of insight into illness. Patients diagnosed with schizophrenia spectrum disorders (N=111) participated in a comprehensive battery of instruments to measure insight dimensions, stigma, neurocognitive functions, symptoms, socio-demographic and clinical variables. Blockwise multiple regression analysis indicates significant association of variability in insight dimensions with gender (7%) and stigma (i. e., stereotype agreement: 5%). Our findings demonstrate an incremental validity of stigma, which indicates a motivational pathway of insight formation. This study enables better understanding of the multifactorial nature of insight, which should be considered in therapeutic interventions to improve insight. The roles of gender and neurocognitive functions in insight formation are also discussed.

  2. Electronic nature of the transition state for nucleoside hydrolase. A blueprint for inhibitor design.

    PubMed

    Horenstein, B A; Schramm, V L

    1993-07-20

    A new approach to understanding transition-state structure is presented which involves the sequential application of experimental and computational methods. A family of experimentally determined kinetic isotope effects is fit simultaneously in a vibrational analysis to provide a geometric model of the transition state. The electrostatic potential surface of the geometric model is defined by molecular orbital calculations to detail the electronic nature of the transition state. The method provides both geometric and charge information for the enzyme-stabilized transition state. Electrostatic potential surface calculations were applied to the N-glycohydrolase reaction catalyzed by nucleoside hydrolase from the trypanosome Crithidia fasciculata. A geometric model of the transition-state structure for the enzymatic hydrolysis of inosine by nucleoside hydrolase has been established by the analysis of a family of kinetic isotope effects [Horenstein, B.A., Parkin, D.W., Estupinan, B., & Schramm, V.L. (1991) Biochemistry 30, 10788]. The transition state has substantial oxycarbonium ion character, but the results of electrostatic potential calculations indicate that the transition-state charge is distributed over the ribosyl ring rather than existing as a localized C+-O<==>C = O+ resonance pair. The electrostatic potential surfaces of the substrate and enzyme-bound products differ considerably from that of the transition state. At the transition state both hypoxanthine and ribose demonstrate regions of positive charge. The positive charge on the ribosyl oxycarbonium ion is moderated by association with an enzyme-directed water nucleophile. The enzyme-bound products contain adjacent areas of negative charge. The electrostatic potential surfaces provide novel insights into transition-state structure and the forces causing release of products.(ABSTRACT TRUNCATED AT 250 WORDS)

  3. The phase transition in VO2 probed using x-ray, visible and infrared radiations

    NASA Astrophysics Data System (ADS)

    Kumar, Suhas; Strachan, John Paul; Kilcoyne, A. L. David; Tyliszczak, Tolek; Pickett, Matthew D.; Santori, Charles; Gibson, Gary; Williams, R. Stanley

    2016-02-01

    Vanadium dioxide (VO2) is a model system that has been used to understand closely occurring multiband electronic (Mott) and structural (Peierls) transitions for over half a century due to continued scientific and technological interests. Among the many techniques used to study VO2, the most frequently used involve electromagnetic radiation as a probe. Understanding of the distinct physical information provided by different probing radiations is incomplete, mostly owing to the complicated nature of the phase transitions. Here, we use transmission of spatially averaged infrared (λ = 1.5 μm) and visible (λ = 500 nm) radiations followed by spectroscopy and nanoscale imaging using x-rays (λ = 2.25-2.38 nm) to probe the same VO2 sample while controlling the ambient temperature across its hysteretic phase transitions and monitoring its electrical resistance. We directly observed nanoscale puddles of distinct electronic and structural compositions during the transition. The two main results are that, during both heating and cooling, the transition of infrared and visible transmission occurs at significantly lower temperatures than the Mott transition, and the electronic (Mott) transition occurs before the structural (Peierls) transition in temperature. We use our data to provide insights into possible microphysical origins of the different transition characteristics. We highlight that it is important to understand these effects because small changes in the nature of the probe can yield quantitatively, and even qualitatively, different results when applied to a non-trivial multiband phase transition. Our results guide more judicious use of probe type and interpretation of the resulting data.

  4. 29 CFR 36.230 - Transition plans.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 29 Labor 1 2010-07-01 2010-07-01 true Transition plans. 36.230 Section 36.230 Labor Office of the... FEDERAL FINANCIAL ASSISTANCE Coverage § 36.230 Transition plans. (a) Submission of plans. An institution... submit either a single transition plan applicable to all such units, or a separate transition...

  5. 10 CFR 5.230 - Transition plans.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 10 Energy 1 2010-01-01 2010-01-01 false Transition plans. 5.230 Section 5.230 Energy NUCLEAR... FEDERAL FINANCIAL ASSISTANCE Coverage § 5.230 Transition plans. (a) Submission of plans. An institution to... either a single transition plan applicable to all such units, or a separate transition plan applicable...

  6. 18 CFR 1317.230 - Transition plans.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 18 Conservation of Power and Water Resources 2 2010-04-01 2010-04-01 false Transition plans. 1317... Coverage § 1317.230 Transition plans. (a) Submission of plans. An institution to which § 1317.225 applies... transition plan applicable to all such units, or a separate transition plan applicable to each such unit....

  7. 7 CFR 15a.18 - Transition plans.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 1 2012-01-01 2012-01-01 false Transition plans. 15a.18 Section 15a.18 Agriculture... FEDERAL FINANCIAL ASSISTANCE Coverage § 15a.18 Transition plans. (a) Submission of plans. An institution... submit either a single transition plan applicable to all such units, or a separate transition...

  8. 7 CFR 15a.18 - Transition plans.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 1 2013-01-01 2013-01-01 false Transition plans. 15a.18 Section 15a.18 Agriculture... FEDERAL FINANCIAL ASSISTANCE Coverage § 15a.18 Transition plans. (a) Submission of plans. An institution... submit either a single transition plan applicable to all such units, or a separate transition...

  9. 7 CFR 15a.18 - Transition plans.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 1 2014-01-01 2014-01-01 false Transition plans. 15a.18 Section 15a.18 Agriculture... FEDERAL FINANCIAL ASSISTANCE Coverage § 15a.18 Transition plans. (a) Submission of plans. An institution... submit either a single transition plan applicable to all such units, or a separate transition...

  10. 36 CFR 1211.230 - Transition plans.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 36 Parks, Forests, and Public Property 3 2011-07-01 2011-07-01 false Transition plans. 1211.230... FINANCIAL ASSISTANCE Coverage § 1211.230 Transition plans. (a) Submission of plans. An institution to which... a single transition plan applicable to all such units, or a separate transition plan applicable...

  11. 10 CFR 5.230 - Transition plans.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 10 Energy 1 2014-01-01 2014-01-01 false Transition plans. 5.230 Section 5.230 Energy NUCLEAR... FEDERAL FINANCIAL ASSISTANCE Coverage § 5.230 Transition plans. (a) Submission of plans. An institution to... either a single transition plan applicable to all such units, or a separate transition plan applicable...

  12. 7 CFR 15a.18 - Transition plans.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 1 2011-01-01 2011-01-01 false Transition plans. 15a.18 Section 15a.18 Agriculture... FEDERAL FINANCIAL ASSISTANCE Coverage § 15a.18 Transition plans. (a) Submission of plans. An institution... submit either a single transition plan applicable to all such units, or a separate transition...

  13. 29 CFR 36.230 - Transition plans.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 29 Labor 1 2014-07-01 2013-07-01 true Transition plans. 36.230 Section 36.230 Labor Office of the... FEDERAL FINANCIAL ASSISTANCE Coverage § 36.230 Transition plans. (a) Submission of plans. An institution... submit either a single transition plan applicable to all such units, or a separate transition...

  14. 32 CFR 196.230 - Transition plans.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 32 National Defense 2 2013-07-01 2013-07-01 false Transition plans. 196.230 Section 196.230... FINANCIAL ASSISTANCE Coverage § 196.230 Transition plans. (a) Submission of plans. An institution to which... a single transition plan applicable to all such units, or a separate transition plan applicable...

  15. 36 CFR 1211.230 - Transition plans.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 36 Parks, Forests, and Public Property 3 2012-07-01 2012-07-01 false Transition plans. 1211.230... FINANCIAL ASSISTANCE Coverage § 1211.230 Transition plans. (a) Submission of plans. An institution to which... a single transition plan applicable to all such units, or a separate transition plan applicable...

  16. 32 CFR 196.230 - Transition plans.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 32 National Defense 2 2012-07-01 2012-07-01 false Transition plans. 196.230 Section 196.230... FINANCIAL ASSISTANCE Coverage § 196.230 Transition plans. (a) Submission of plans. An institution to which... a single transition plan applicable to all such units, or a separate transition plan applicable...

  17. 44 CFR 19.230 - Transition plans.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 44 Emergency Management and Assistance 1 2012-10-01 2011-10-01 true Transition plans. 19.230... RECEIVING FEDERAL FINANCIAL ASSISTANCE Coverage § 19.230 Transition plans. (a) Submission of plans. An... submit either a single transition plan applicable to all such units, or a separate transition...

  18. 45 CFR 2555.230 - Transition plans.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 45 Public Welfare 4 2012-10-01 2012-10-01 false Transition plans. 2555.230 Section 2555.230 Public... Coverage § 2555.230 Transition plans. (a) Submission of plans. An institution to which § 2555.225 applies... transition plan applicable to all such units, or a separate transition plan applicable to each such unit....

  19. 32 CFR 196.230 - Transition plans.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 32 National Defense 2 2011-07-01 2011-07-01 false Transition plans. 196.230 Section 196.230... FINANCIAL ASSISTANCE Coverage § 196.230 Transition plans. (a) Submission of plans. An institution to which... a single transition plan applicable to all such units, or a separate transition plan applicable...

  20. 10 CFR 5.230 - Transition plans.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 10 Energy 1 2011-01-01 2011-01-01 false Transition plans. 5.230 Section 5.230 Energy NUCLEAR... FEDERAL FINANCIAL ASSISTANCE Coverage § 5.230 Transition plans. (a) Submission of plans. An institution to... either a single transition plan applicable to all such units, or a separate transition plan applicable...