A system overview of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS)

NASA Technical Reports Server (NTRS)

Porter, Wallace M.; Enmark, Harry T.

1987-01-01

The AVIRIS instrument has been designed to do high spectral resolution remote sensing of the Earth. Utilizing both silicon and indium antimonide line array detectors, AVIRIS covers the spectral region from 0.41 to 2.45 microns in 10-nm bands. It was designed to fly aboard NASA's U-2 and ER-2 aircraft, where it will simulate the performance of future spacecraft instrumentation. Flying at an altitude of 20 km, it has an instantaneous field of view of 20 m and views a swath over 10 km wide. With an ability to record 40 minutes of data, it can, during a single flight, capture 500 km of flight line.

Fast simulation tool for ultraviolet radiation at the earth's surface

NASA Astrophysics Data System (ADS)

Engelsen, Ola; Kylling, Arve

2005-04-01

FastRT is a fast, yet accurate, UV simulation tool that computes downward surface UV doses, UV indices, and irradiances in the spectral range 290 to 400 nm with a resolution as small as 0.05 nm. It computes a full UV spectrum within a few milliseconds on a standard PC, and enables the user to convolve the spectrum with user-defined and built-in spectral response functions including the International Commission on Illumination (CIE) erythemal response function used for UV index calculations. The program accounts for the main radiative input parameters, i.e., instrumental characteristics, solar zenith angle, ozone column, aerosol loading, clouds, surface albedo, and surface altitude. FastRT is based on look-up tables of carefully selected entries of atmospheric transmittances and spherical albedos, and exploits the smoothness of these quantities with respect to atmospheric, surface, geometrical, and spectral parameters. An interactive site, http://nadir.nilu.no/~olaeng/fastrt/fastrt.html, enables the public to run the FastRT program with most input options. This page also contains updated information about FastRT and links to freely downloadable source codes and binaries.

Influence of aerosols on surface reaching spectral irradiance and introduction to a new technique for estimating aerosol radiative forcing from spectral flux measurements

NASA Astrophysics Data System (ADS)

Rao, R. R.

2015-12-01

Aerosol radiative forcing estimates with high certainty are required in climate change studies. The approach in estimating the aerosol radiative forcing by using the chemical composition of aerosols is not effective as the chemical composition data with radiative properties are not widely available. In this study we look into the approach where ground based spectral radiation flux measurements along with an RT model is used to estimate radiative forcing. Measurements of spectral flux were made using an ASD spectroradiometer with 350 - 1050 nm wavelength range and 3nm resolution for around 54 clear-sky days during which AOD range was around 0.1 to 0.7. Simultaneous measurements of black carbon were also made using Aethalometer (Magee Scientific) which ranged from around 1.5 ug/m3 to 8 ug/m3. All the measurements were made in the campus of Indian Institute of Science which is in the heart of Bangalore city. The primary study involved in understanding the sensitivity of spectral flux to change in the mass concentration of individual aerosol species (Optical properties of Aerosols and Clouds -OPAC classified aerosol species) using the SBDART RT model. This made us clearly distinguish the region of influence of different aerosol species on the spectral flux. Following this, a new technique has been introduced to estimate an optically equivalent mixture of aerosol species for the given location. The new method involves an iterative process where the mixture of aerosol species are changed in OPAC model and RT model is run as long as the mixture which mimics the measured spectral flux within 2-3% deviation from measured spectral flux is obtained. Using the optically equivalent aerosol mixture and RT model aerosol radiative forcing is estimated. The new method is limited to clear sky scenes and its accuracy to derive an optically equivalent aerosol mixture reduces when diffuse component of flux increases. Our analysis also showed that direct component of spectral flux is more sensitive to different aerosol species than total spectral flux which was also supported by our observed data.

Using ISERV and Commercial Satellite Imagery to Assess and Monitor Recovery Efforts in Urban Damaged Areas

NASA Technical Reports Server (NTRS)

Bell, Jordan R.; Molthan, Andrew L.; Burks, Jason E.; McGrath, Kevin M.

2014-01-01

NASA's Short-term Prediction, Research, and Transition (SPoRT) Center uses a wide array of satellites to monitor and assess the impacts of natural disasters, with support from NASA's Applied Sciences Program. One of the newest sensors SPoRT is utilizing in these activities is the International Space Station (ISS) SERVIR Environmental Research and Visualization System (ISERV) instrument. ISERV provides a unique view of the areas impacted and will play a big role in monitoring the recovery these areas. High-resolution commercial satellite data is also used to monitor urban areas that have been impacted by natural disasters. SPoRT is developing techniques to measure the extent of these disasters and to monitor recovery. Several of these techniques include semi-automatic feature detection and change as well as developing an experimental damage assessment based upon the visible damage observed by the satellites. Furthermore, throughout these activities SPoRT hopes to provide additional data to the NOAA National Weather Service Damage Assessment Toolkit, which will help to supplement those activities being performed in the field.

Evaluation of sensitivity of TaqMan RT-PCR for rubella virus detection in clinical specimens.

PubMed

Okamoto, Kiyoko; Mori, Yoshio; Komagome, Rika; Nagano, Hideki; Miyoshi, Masahiro; Okano, Motohiko; Aoki, Yoko; Ogura, Atsushi; Hotta, Chiemi; Ogawa, Tomoko; Saikusa, Miwako; Kodama, Hiroe; Yasui, Yoshihiro; Minagawa, Hiroko; Kurata, Takako; Kanbayashi, Daiki; Kase, Tetsuo; Murata, Sachiko; Shirabe, Komei; Hamasaki, Mitsuhiro; Kato, Takashi; Otsuki, Noriyuki; Sakata, Masafumi; Komase, Katsuhiro; Takeda, Makoto

2016-07-01

An easy and reliable assay for detection of the rubella virus is required to strengthen rubella surveillance. Although a TaqMan RT-PCR assay for detection of the rubella virus has been established in Japan, its utility for diagnostic purposes has not been tested. To allow introduction of the TaqMan RT-PCR into the rubella surveillance system in Japan, the sensitivity of the assay was determined using representative strains for all genotypes and clinical specimens. The detection limits of the method for individual genotypes were examined using viral RNA extracted from 13 representative strains. The assay was also tested at 10 prefectural laboratories in Japan, designated as local reference laboratories for measles and rubella, to allow nationwide application of the assay. The detection limits and amplification efficiencies of the assay were similar among all the representative strains of the 13 genotypes. The TaqMan RT-PCR could detect approximately 90% of throat swab and urine samples taken up to 5days of illness. These samples were determined positive by a highly sensitive nested RT-PCR. The TaqMan RT-PCR could detect at least 10 pfu of rubella virus. Although the sensitivity was somewhat lower than that of the conventional nested RT-PCR, the TaqMan RT-PCR could be more practical to routine tests for rubella laboratory diagnosis and detection in view of the rapid response and reducing risks of contamination. Copyright © 2016 Elsevier B.V. All rights reserved.

Compilation of a near-infrared library for the construction of quantitative models of amoxicillin and potassium clavulanate oral dosage forms

NASA Astrophysics Data System (ADS)

Zou, Wen-bo; Chong, Xiao-meng; Wang, Yan; Hu, Chang-qin

2018-05-01

The accuracy of NIR quantitative models depends on calibration samples with concentration variability. Conventional sample collecting methods have some shortcomings especially the time-consuming which remains a bottleneck in the application of NIR models for Process Analytical Technology (PAT) control. A study was performed to solve the problem of sample selection collection for construction of NIR quantitative models. Amoxicillin and potassium clavulanate oral dosage forms were used as examples. The aim was to find a normal approach to rapidly construct NIR quantitative models using an NIR spectral library based on the idea of a universal model [2021]. The NIR spectral library of amoxicillin and potassium clavulanate oral dosage forms was defined and consisted of spectra of 377 batches of samples produced by 26 domestic pharmaceutical companies, including tablets, dispersible tablets, chewable tablets, oral suspensions, and granules. The correlation coefficient (rT) was used to indicate the similarities of the spectra. The samples’ calibration sets were selected from a spectral library according to the median rT of the samples to be analyzed. The rT of the samples selected was close to the median rT. The difference in rT of those samples was 1.0% to 1.5%. We concluded that sample selection is not a problem when constructing NIR quantitative models using a spectral library versus conventional methods of determining universal models. The sample spectra with a suitable concentration range in the NIR models were collected quickly. In addition, the models constructed through this method were more easily targeted.

Delineating Tree Types in a Complex Tropical Forest Setting Using High Resolution Multispectral Satellite Imagery

NASA Astrophysics Data System (ADS)

Cross, M.

2016-12-01

An improved process for the identification of tree types from satellite imagery for tropical forests is needed for more accurate assessments of the impact of forests on the global climate. La Selva Biological Station in Costa Rica was the tropical forest area selected for this particular study. WorldView-3 imagery was utilized because of its high spatial, spectral and radiometric resolution, its availability, and its potential to differentiate species in a complex forest setting. The first-step was to establish confidence in the high spatial and high radiometric resolution imagery from WorldView-3 in delineating tree types within a complex forest setting. In achieving this goal, ASD field spectrometer data were collected of specific tree species to establish solid ground control within the study site. The spectrometer data were collected from the top of each specific tree canopy utilizing established towers located at La Selva Biological Station so as to match the near-nadir view of the WorldView-3 imagery. The ASD data was processed utilizing the spectral response functions for each of the WorldView-3 bands to convert the ASD data into a band specific reflectivity. This allowed direct comparison of the ASD spectrometer reflectance data to the WorldView-3 multispectral imagery. The WorldView-3 imagery was processed to surface reflectance using two standard atmospheric correction procedures and the proprietary DigitalGlobe Atmospheric Compensation (AComp) product. The most accurate correction process was identified through comparison to the spectrometer data collected. A series of statistical measures were then utilized to access the accuracy of the processed imagery and which imagery bands are best suited for tree type identification. From this analysis, a segmentation/classification process was performed to identify individual tree type locations within the study area. It is envisioned the results of this study will improve traditional forest classification processes, provide more accurate assessments of species density and distribution, facilitate a more accurate biomass estimate of the tropical forest which will impact the accuracy of tree carbon storage estimates, and ultimately assist in developing a better overall characterization of tropical rainforest dynamics.

Selected issues connected with determination of requirements of spectral properties of camouflage patterns

NASA Astrophysics Data System (ADS)

Racek, František; Jobánek, Adam; Baláž, Teodor; Krejčí, Jaroslav

2017-10-01

Traditionally spectral reflectance of the material is measured and compared with permitted spectral reflectance boundaries. The boundaries are limited by upper and lower curve of spectral reflectance. The boundaries for unique color has to fulfil the operational requirements as a versatility of utilization through the all year seasons, day and weather condition on one hand and chromatic and spectral matching with background as well as the manufacturability on the other hand. The interval between the boundaries suffers with ambivalent feature. Camouflage pattern producer would be happy to see it much wider, but blending effect into its particular background could be better with narrower tolerance limits. From the point of view of long time user of camouflage pattern battledress, there seems to be another ambivalent feature. Width of the tolerance zone reflecting natural dispersion of spectral reflectance values allows the significant distortions of shape of the spectral curve inside the given boundaries.

Sport Transition of JPSS VIIRS Imagery for Night-time Applications

NASA Technical Reports Server (NTRS)

Fuell, Kevin; LeRoy, Anita; Smith, Matt; Miller, Steve; Kann, Diedre; Bernhardt, David; Reydell, Nezette; Cox, Robert

2014-01-01

The NASA/Short-term Prediction, Research, and Transition (SPoRT) Program and NOAA/Cooperative Institute for Research in the Atmosphere (CIRA) work within the NOAA/Joint Polar Satellite System (JPSS) Proving Ground to demonstrate the unique capabilities of the VIIRS instrument. Very similar to MODIS, the VIIRS instrument provides many high-resolution visible and infrared channels in a broad spectrum. In addition, VIIRS is equipped with a low-light sensor that is able to detect light emissions from the land and atmosphere as well as reflected sunlight by the lunar surface. This band is referred to as the Day-Night Band due to the sunlight being used at night to see cloud and topographic features just as one would typically see in day-time visible imagery. NWS forecast offices that collaborate with SPoRT and CIRA have utilized MODIS imagery in operations, but have longed for more frequent passes of polar-orbiting data. The VIIRS instrument enhances SPoRT collaborations with WFOs by providing another day and night-time pass, and at times two additional passes due to its large swath width. This means that multi-spectral, RGB imagery composites are more readily available to prepare users for their use in GOES-R era and high-resolution imagery for use in high-latitudes is more frequently able to supplement standard GOES imagery within the SPoRT Hybrid GEO-LEO product. The transition of VIIRS also introduces the new Day-Night Band capability to forecast operations. An Intensive Evaluation Period (IEP) was conducted in Summer 2013 with a group of "Front Range" NWS offices related to VIIRS night-time imagery. VIIRS single-channel imagery is able to better analyze the specific location of fire hotspots and other land features, as well as provide a more true measurement of various cloud and aerosol properties than geostationary measurements, especially at night. Viewed within the SPoRT Hybrid imagery, the VIIRS data allows forecasters to better interpret the more frequent, but coarse GOES Imagery. Night-time Microphysics and Dust RGB Imagery provides cloud analysis of cloud height, thickness, and composition in order for operational applications such as separating fog from low clouds, dust plume detection, and determining precipitating clouds in radar-void/ blocked regions. The Day-Night Band has a particular benefit to seeing light from cities, fires, or other emissions as well as the reflection of moonlight off of clouds and smoke plumes, given the right lunar phase and angle. Examples from the VIIRS transition and IEP will be presented.

Accommodation-induced variations in retinal thickness measured by spectral domain optical coherence tomography

NASA Astrophysics Data System (ADS)

Fan, Shanhui; Sun, Yong; Dai, Cuixia; Zheng, Haihua; Ren, Qiushi; Jiao, Shuliang; Zhou, Chuanqing

2014-09-01

To research retinal stretching or distortion with accommodation, accommodation-induced changes in retinal thickness (RT) in the macular area were investigated in a population of young adults (n=23) by using a dual-channel spectral domain optical coherence tomography (SD-OCT) system manufactured in-house for this study. This dual-channel SD-OCT is capable of imaging the cornea and retina simultaneously with an imaging speed of 24 kHz A-line scan rate, which can provide the anatomical dimensions of the eye, including the RT and axial length. Thus, the modification of the RT with accommodation can be calculated. A significant decrease in the RT (13.50±1.25 μm) was observed during maximum accommodation. In the 4 mm×4 mm macular area centered at the fovea, we did not find a significant quadrant-dependent difference in retinal volume change, which indicates that neither retinal stretching nor distortion was quadrant-dependent during accommodation. We speculate that the changes in RT with maximum accommodation resulted from accommodation-induced ciliary muscle contractions.

US geographic distribution of rt-PA utilization by hospital for acute ischemic stroke.

PubMed

Kleindorfer, Dawn; Xu, Yingying; Moomaw, Charles J; Khatri, Pooja; Adeoye, Opeolu; Hornung, Richard

2009-11-01

Previously, we have estimated US national rates of recombinant tissue plasminogen activator (rt-PA) use to be 1.8% to 3.0% of all ischemic stroke patients. However, we hypothesized that the rate of rt-PA use may vary widely depending on regional variation, and that a large percentage of the US population likely does not have access to hospitals using rt-PA regularly. We describe the US geographic distribution of hospitals using rt-PA for acute ischemic stroke. This analysis used the MEDPAR database, which is a claims-based dataset that contains every fee-for-service Medicare-eligible hospital discharge in the US. Cases potentially eligible for rt-PA treatment based on diagnosis were defined as those with a hospital DRG code of 14, 15, or 559, and that also had an ICD-9 code of 433, 434, or 436. Thrombolysis use was defined as an ICD-9 code of 99.1. Study interval was July 1, 2005 to June 30, 2007. Hospital locations were mapped using ArcView software; population densities and regions of the US are based on US Census 2000. There were 4750 hospitals in the MEDPAR database, which included 495 186 ischemic stroke admissions during the study period. Of these hospitals, 64% had no reported treatments with rt-PA for ischemic stroke, and 0.9% reported >10% treatment rates within the MEDPAR dataset. Bed size, rural or underserved designation, and population density were significantly associated with reported rt-PA treatment rates, and remained significant in the multivariable regression. Approximately 162 million US citizens reside in counties containing a hospital reporting a >or=2.4% treatment rate within the MEDPAR dataset. We report the first description of US hospital rt-PA treatment rates by hospital. Unfortunately, we found that 64% of US hospitals did not report giving rt-PA at all within the MEDPAR database within a 2-year period. These tended to be hospitals that were smaller (average bed size of 95), located in less densely populated areas, or located in the South or Midwest. In addition, 40% of the US population resides in counties without a hospital that administered rt-PA to at least 2.4% of ischemic stroke patients, although distinguishing transferred patients is problematic within administrative datasets. Such national-based resource-utilization data is important for planning at the local and national level, especially for such initiatives as telemedicine, to reach underserved areas.

Applications of Satellite Remote Sensing for Response to and Recovery from Meteorological Disasters

NASA Technical Reports Server (NTRS)

Molthan, Andrew I.; Burks, Jason E.; McGrath, Kevin M.; Bell, Jordan R.

2014-01-01

Numerous on-orbit satellites provide a wide range of spatial, spectral, and temporal resolutions supporting the use of their resulting imagery in assessments of disasters that are meteorological in nature. This presentation will provide an overview of recent use of Earth remote sensing by NASA's Short-term Prediction Research and Transition (SPoRT) Center in response to disaster activities in 2012 and 2013, along with case studies supporting ongoing research and development. The SPoRT Center, with support from NASA's Applied Sciences Program, has explored a variety of new applications of Earth-observing sensors to support disaster response. In May 2013, the SPoRT Center developed unique power outage composites representing the first clear sky view of damage inflicted upon Moore and Oklahoma City, Oklahoma following the devastating EF-5 tornado that occurred on May 20. Subsequent ASTER, MODIS, Landsat-7 and Landsat-8 imagery help to identify the damaged areas. Higher resolution imagery of Moore, Oklahoma were provided by commercial satellites and the recently available International Space Station (ISS) SERVIR Environmental Research and Visualization System (ISERV) instrument. New techniques are being explored by the SPoRT team in order to better identify damage visible in high resolution imagery, and to monitor ongoing recovery for Moore, Oklahoma. This presentation will provide an overview of near real-time data products developed for dissemination to SPoRT's partners in NOAA's National Weather Service, through collaboration with the USGS and other federal agencies. Specifically, it will focus on integration of various data sets within the NOAA National Weather Service Damage Assessment Toolkit, which allows meteorologists in the field to consult available satellite imagery while performing their damage assessment.

Spectral reflectance and emissivity features of broad leaf plants: Prospects for remote sensing in the thermal infrared (8.0-14.0 μm)

USGS Publications Warehouse

Ribeiro da Luz, Beatriz; Crowley, James K.

2007-01-01

In contrast to visible and short-wave infrared data, thermal infrared spectra of broad leaf plants show considerable spectral diversity, suggesting that such data eventually could be utilized to map vegetation composition. However, remotely measuring the subtle emissivity features of leaves still presents major challenges. To be successful, sensors operating in the 8–14 μm atmospheric window must have high signal-to-noise and a small enough instantaneous field of view to allow measurements of only a few leaf surfaces. Methods for atmospheric compensation, temperature–emissivity separation, and spectral feature analysis also will need to be refined to allow the recognition, and perhaps, exploitation of leaf thermal infrared spectral properties.

The value of an educational video before consultation with a radiation oncologist.

PubMed

Matsuyama, Robin K; Lyckholm, Laurie J; Molisani, Anthony; Moghanaki, Drew

2013-06-01

This study aims to assess the efficacy of a radiation therapy (RT) education video for patients referred for treatment. The investigators produced a 23-min guide to radiation therapy DVD, combining didactic material and patient narratives. Patients (n=32) had not yet received their initial consultation. Baseline awareness about cancer and treatment was assessed by surveys including the rapid estimate of adult literacy in medicine. Knowledge about RT was assessed before and after viewing the video with a separate 21 question survey. Differences in benefit for sociodemographic subgroups including age, gender, ethnicity, income, education, and health literacy level were explored. Baseline assessments identified 78 % of patients regardless of sociodemographic status had "little" to "no" basic knowledge of RT. The mean number of correct responses in the 21 question survey assessing how RT works improved from 9.8 to 11.1 after watching the video (p<0.0001; 95 % CI: 1.3-3.0), a statistically significant benefit that was present among all sociodemographic subgroups, but more prominent among those with a greater than high school education (p=0.002). Patient satisfaction with the video was high. Knowledge among cancer patients regarding RT is poor, regardless of sociodemographic factors. This pilot study demonstrates the utility of a brief video to universally improve patient awareness about RT. While patients may ultimately learn about RT during their course of treatment, we advocate for any tools that can improve patient knowledge at the time of initial consultation as this is typically the time they are asked to acknowledge informed consent for treatment.

TU-C-17A-03: An Integrated Contour Evaluation Software Tool Using Supervised Pattern Recognition for Radiotherapy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chen, H; Tan, J; Kavanaugh, J

Purpose: Radiotherapy (RT) contours delineated either manually or semiautomatically require verification before clinical usage. Manual evaluation is very time consuming. A new integrated software tool using supervised pattern contour recognition was thus developed to facilitate this process. Methods: The contouring tool was developed using an object-oriented programming language C# and application programming interfaces, e.g. visualization toolkit (VTK). The C# language served as the tool design basis. The Accord.Net scientific computing libraries were utilized for the required statistical data processing and pattern recognition, while the VTK was used to build and render 3-D mesh models from critical RT structures in real-timemore » and 360° visualization. Principal component analysis (PCA) was used for system self-updating geometry variations of normal structures based on physician-approved RT contours as a training dataset. The inhouse design of supervised PCA-based contour recognition method was used for automatically evaluating contour normality/abnormality. The function for reporting the contour evaluation results was implemented by using C# and Windows Form Designer. Results: The software input was RT simulation images and RT structures from commercial clinical treatment planning systems. Several abilities were demonstrated: automatic assessment of RT contours, file loading/saving of various modality medical images and RT contours, and generation/visualization of 3-D images and anatomical models. Moreover, it supported the 360° rendering of the RT structures in a multi-slice view, which allows physicians to visually check and edit abnormally contoured structures. Conclusion: This new software integrates the supervised learning framework with image processing and graphical visualization modules for RT contour verification. This tool has great potential for facilitating treatment planning with the assistance of an automatic contour evaluation module in avoiding unnecessary manual verification for physicians/dosimetrists. In addition, its nature as a compact and stand-alone tool allows for future extensibility to include additional functions for physicians’ clinical needs.« less

Salmonella detection from chicken rinsate with surface enhanced Raman spectroscopy and RT-PCR validation

USDA-ARS?s Scientific Manuscript database

Optical detection of bacteria has been approached in recent years as a bacteria detection method that can counter time restraints of traditional plating or the high reoccurring cost of real-time polymerase chain reaction (RT-PCR). The goal of optical detection is to identify bacteria with spectral s...

Smoke from Colorado Wildfires

NASA Technical Reports Server (NTRS)

2002-01-01

The Hayman fire, situated about 65 kilometers southwest of Denver, Colorado, is the largest fire ever recorded in that state. The amount and distribution of smoke from the Hayman fire and from the Ponil Complex fires south of the New Mexico-Colorado border are portrayed in these views from the Multi-angle Imaging SpectroRadiometer (MISR). The images were captured on June 9, 2002, on the second day of the Hayman fire, when only about 13 percent of the total 137,000 acres eventually consumed had been scorched.

The image at top-left was acquired by MISR's most oblique (70-degree) forward-viewing camera, and the view at bottom-left was captured by MISR's 26-degree forward-viewing camera. Both left-hand panels are 'false color' views, utilizing near-infrared, red, and blue spectral bands displayed as red, green and blue respectively. With this spectral combination, highly vegetated areas appear red. At top right is a map of aerosol optical depth. This map utilizes the capability of the oblique view angles to measure the abundance of particles in the atmosphere. Haze distributed across the eastern part of the state is indicated by a large number of green pixels, and areas where no retrieval occurred are shown in dark grey. The more oblique perspective utilized within the top panels enhances the appearance of smoke and reveals the haze. In the lower left-hand panel the view is closer to nadir (downward-looking). Here the smoke plumes appear more compact and the haze across eastern Colorado is not detected. The lower right-hand panel is a stereoscopically derived height field that echoes the compact shape of the smoke plumes in the near-nadir image. Results indicate that the smoke plumes reached altitudes of a few kilometers above the surface terrain, or about the same height as the small clouds that appear orange along the bottom edge to the left of center.

Data used in these visualizations were generated as part of operational processing at the Atmospheric Sciences Data Center at NASA Langley Research Center. The images were acquired during Terra orbit 13170 and cover an area of about 400 kilometers x 565 kilometers. They utilize data from blocks 58 to 61 within World Reference System-2 path 32.

MISR was built and is managed by NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Office of Earth Science, Washington, DC. The Terra satellite is managed by NASA's Goddard Space Flight Center, Greenbelt, MD. JPL is a division of the California Institute of Technology.

Detection and mapping the spatial distribution of bracken fern weeds using the Landsat 8 OLI new generation sensor

NASA Astrophysics Data System (ADS)

Matongera, Trylee Nyasha; Mutanga, Onisimo; Dube, Timothy; Sibanda, Mbulisi

2017-05-01

Bracken fern is an invasive plant that presents serious environmental, ecological and economic problems around the world. An understanding of the spatial distribution of bracken fern weeds is therefore essential for providing appropriate management strategies at both local and regional scales. The aim of this study was to assess the utility of the freely available medium resolution Landsat 8 OLI sensor in the detection and mapping of bracken fern at the Cathedral Peak, South Africa. To achieve this objective, the results obtained from Landsat 8 OLI were compared with those derived using the costly, high spatial resolution WorldView-2 imagery. Since previous studies have already successfully mapped bracken fern using high spatial resolution WorldView-2 image, the comparison was done to investigate the magnitude of difference in accuracy between the two sensors in relation to their acquisition costs. To evaluate the performance of Landsat 8 OLI in discriminating bracken fern compared to that of Worldview-2, we tested the utility of (i) spectral bands; (ii) derived vegetation indices as well as (iii) the combination of spectral bands and vegetation indices based on discriminant analysis classification algorithm. After resampling the training and testing data and reclassifying several times (n = 100) based on the combined data sets, the overall accuracies for both Landsat 8 and WorldView-2 were tested for significant differences based on Mann-Whitney U test. The results showed that the integration of the spectral bands and derived vegetation indices yielded the best overall classification accuracy (80.08% and 87.80% for Landsat 8 OLI and WorldView-2 respectively). Additionally, the use of derived vegetation indices as a standalone data set produced the weakest overall accuracy results of 62.14% and 82.11% for both the Landsat 8 OLI and WorldView-2 images. There were significant differences {U (100) = 569.5, z = -10.8242, p < 0.01} between the classification accuracies derived based on Landsat OLI 8 and those derived using WorldView-2 sensor. Although there were significant differences between Landsat and WorldView-2 accuracies, the magnitude of variation (9%) between the two sensors was within an acceptable range. Therefore, the findings of this study demonstrated that the recently launched Landsat 8 OLI multispectral sensor provides valuable information that could aid in the long term continuous monitoring and formulation of effective bracken fern management with acceptable accuracies that are comparable to those obtained from the high resolution WorldView-2 commercial sensor.

Viewing Response-to-Intervention through an Educational Change Paradigm: What Can We Learn?

ERIC Educational Resources Information Center

Sansosti, Frank J.; Noltemeyer, Amity

2008-01-01

Response-to-Intervention (RtI), a framework for improving academic and behavioral outcomes for all students, can be viewed as a current example of an educational change initiative. Given the difficulties that some schools may be experiencing when implementing RtI effectively, it is important to examine prior educational change conceptualizations…

Advanced x-ray imaging spectrometer

NASA Technical Reports Server (NTRS)

Callas, John L. (Inventor); Soli, George A. (Inventor)

1998-01-01

An x-ray spectrometer that also provides images of an x-ray source. Coded aperture imaging techniques are used to provide high resolution images. Imaging position-sensitive x-ray sensors with good energy resolution are utilized to provide excellent spectroscopic performance. The system produces high resolution spectral images of the x-ray source which can be viewed in any one of a number of specific energy bands.

Absolute Radiometric Calibration of Narrow-Swath Imaging Sensors with Reference to Non-Coincident Wide-Swath Sensors

NASA Technical Reports Server (NTRS)

McCorkel, Joel; Thome, Kurtis; Lockwood, Ronald

2012-01-01

An inter-calibration method is developed to provide absolute radiometric calibration of narrow-swath imaging sensors with reference to non-coincident wide-swath sensors. The method predicts at-sensor radiance using non-coincident imagery from the reference sensor and knowledge of spectral reflectance of the test site. The imagery of the reference sensor is restricted to acquisitions that provide similar view and solar illumination geometry to reduce uncertainties due to directional reflectance effects. Spectral reflectance of the test site is found with a simple iterative radiative transfer method using radiance values of a well-understood wide-swath sensor and spectral shape information based on historical ground-based measurements. At-sensor radiance is calculated for the narrow-swath sensor using this spectral reflectance and atmospheric parameters that are also based on historical in situ measurements. Results of the inter-calibration method show agreement on the 2 5 percent level in most spectral regions with the vicarious calibration technique relying on coincident ground-based measurements referred to as the reflectance-based approach. While the variability of the inter-calibration method based on non-coincident image pairs is significantly larger, results are consistent with techniques relying on in situ measurements. The method is also insensitive to spectral differences between the sensors by transferring to surface spectral reflectance prior to prediction of at-sensor radiance. The utility of this inter-calibration method is made clear by its flexibility to utilize image pairings with acquisition dates differing in excess of 30 days allowing frequent absolute calibration comparisons between wide- and narrow-swath sensors.

Structural Maturation of HIV-1 Reverse Transcriptase—A Metamorphic Solution to Genomic Instability

PubMed Central

London, Robert E.

2016-01-01

Human immunodeficiency virus 1 (HIV-1) reverse transcriptase (RT)—a critical enzyme of the viral life cycle—undergoes a complex maturation process, required so that a pair of p66 precursor proteins can develop conformationally along different pathways, one evolving to form active polymerase and ribonuclease H (RH) domains, while the second forms a non-functional polymerase and a proteolyzed RH domain. These parallel maturation pathways rely on the structural ambiguity of a metamorphic polymerase domain, for which the sequence–structure relationship is not unique. Recent nuclear magnetic resonance (NMR) studies utilizing selective labeling techniques, and structural characterization of the p66 monomer precursor have provided important insights into the details of this maturation pathway, revealing many aspects of the three major steps involved: (1) domain rearrangement; (2) dimerization; and (3) subunit-selective RH domain proteolysis. This review summarizes the major structural changes that occur during the maturation process. We also highlight how mutations, often viewed within the context of the mature RT heterodimer, can exert a major influence on maturation and dimerization. It is further suggested that several steps in the RT maturation pathway may provide attractive targets for drug development. PMID:27690082

Incorporation of satellite remote sensing pan-sharpened imagery into digital soil prediction and mapping models to characterize soil property variability in small agricultural fields

NASA Astrophysics Data System (ADS)

Xu, Yiming; Smith, Scot E.; Grunwald, Sabine; Abd-Elrahman, Amr; Wani, Suhas P.

2017-01-01

Soil prediction models based on spectral indices from some multispectral images are too coarse to characterize spatial pattern of soil properties in small and heterogeneous agricultural lands. Image pan-sharpening has seldom been utilized in Digital Soil Mapping research before. This research aimed to analyze the effects of pan-sharpened (PAN) remote sensing spectral indices on soil prediction models in smallholder farm settings. This research fused the panchromatic band and multispectral (MS) bands of WorldView-2, GeoEye-1, and Landsat 8 images in a village in Southern India by Brovey, Gram-Schmidt and Intensity-Hue-Saturation methods. Random Forest was utilized to develop soil total nitrogen (TN) and soil exchangeable potassium (Kex) prediction models by incorporating multiple spectral indices from the PAN and MS images. Overall, our results showed that PAN remote sensing spectral indices have similar spectral characteristics with soil TN and Kex as MS remote sensing spectral indices. There is no soil prediction model incorporating the specific type of pan-sharpened spectral indices always had the strongest prediction capability of soil TN and Kex. The incorporation of pan-sharpened remote sensing spectral data not only increased the spatial resolution of the soil prediction maps, but also enhanced the prediction accuracy of soil prediction models. Small farms with limited footprint, fragmented ownership and diverse crop cycle should benefit greatly from the pan-sharpened high spatial resolution imagery for soil property mapping. Our results show that multiple high and medium resolution images can be used to map soil properties suggesting the possibility of an improvement in the maps' update frequency. Additionally, the results should benefit the large agricultural community through the reduction of routine soil sampling cost and improved prediction accuracy.

Distance learning and the internet in respiratory therapy education.

PubMed

Varekojis, Sarah M; Sergakis, Georgianna G; Dunlevy, Crystal L; Foote, Elbie; Clutter, Jill

2011-11-01

The profession of respiratory therapy (RT) continues to grow both in number, due to population growth and an ever-increasing aging population, and scope of practice, due to both new and expanded roles and responsibilities in divergent areas of clinical practice. Instructional technology, including distance learning, will probably play a key role in training, educating, and assessing RT students to meet the increasing demand for practitioners. To assess current uses of distance learning and opinions concerning the appropriate use of distance education in RT education programs nationwide. A 13-item on-line survey was designed to collect information about the frequency of use of various types of distance education typically utilized in RT education programs. The survey was sent to directors of 343 Committee on Accreditation for Respiratory Care accredited programs of RT education that offer entry-level or advanced courses of study. The response rate was 50% (169 respondents). Fifty-two percent of the respondents indicated that their courses included some form of on-line learning component. Most directors anticipated that the distance composition of their course offerings will remain unchanged or increase in the near future. Our results indicate that, while distance education plays an important supportive role in RT education, there is still a preference for face-to-face instruction and Internet-facilitated courses among program directors. Program directors continue to view the laboratory and clinical settings as hands-on environments that require instructor supervision in order for students to demonstrate proficiency and critical thinking skills. When used appropriately, distance learning may be an efficient and effective approach to address the many barriers to education faced by the health workforce in general, including budget constraints, overloaded schedules, the need for on-the-job learning opportunities, and lack of access.

Temporal measurement and analysis of high-resolution spectral signatures of plants and relationships to biophysical characteristics

NASA Astrophysics Data System (ADS)

Bostater, Charles R., Jr.; Rebbman, Jan; Hall, Carlton; Provancha, Mark; Vieglais, David

1995-11-01

Measurements of temporal reflectance signatures as a function of growing season for sand live oak (Quercus geminata), myrtle oak (Q. myrtifolia, and saw palmetto (Serenoa repens) were collected during a two year study period. Canopy level spectral reflectance signatures, as a function of 252 channels between 368 and 1115 nm, were collected using near nadir viewing geometry and a consistent sun illumination angle. Leaf level reflectance measurements were made in the laboratory using a halogen light source and an environmental optics chamber with a barium sulfate reflectance coating. Spectral measurements were related to several biophysical measurements utilizing optimal passive ambient correlation spectroscopy (OPACS) technique. Biophysical parameters included percent moisture, water potential (MPa), total chlorophyll, and total Kjeldahl nitrogen. Quantitative data processing techniques were used to determine optimal bands based on the utilization of a second order derivative or inflection estimator. An optical cleanup procedure was then employed that computes the double inflection ratio (DIR) spectra for all possible three band combinations normalized to the previously computed optimal bands. These results demonstrate a unique approach to the analysis of high spectral resolution reflectance signatures for estimation of several biophysical measures of plants at the leaf and canopy level from optimally selected bands or bandwidths.

Wide-Field Imaging Interferometry Spatial-Spectral Image Synthesis Algorithms

NASA Technical Reports Server (NTRS)

Lyon, Richard G.; Leisawitz, David T.; Rinehart, Stephen A.; Memarsadeghi, Nargess; Sinukoff, Evan J.

2012-01-01

Developed is an algorithmic approach for wide field of view interferometric spatial-spectral image synthesis. The data collected from the interferometer consists of a set of double-Fourier image data cubes, one cube per baseline. These cubes are each three-dimensional consisting of arrays of two-dimensional detector counts versus delay line position. For each baseline a moving delay line allows collection of a large set of interferograms over the 2D wide field detector grid; one sampled interferogram per detector pixel per baseline. This aggregate set of interferograms, is algorithmically processed to construct a single spatial-spectral cube with angular resolution approaching the ratio of the wavelength to longest baseline. The wide field imaging is accomplished by insuring that the range of motion of the delay line encompasses the zero optical path difference fringe for each detector pixel in the desired field-of-view. Each baseline cube is incoherent relative to all other baseline cubes and thus has only phase information relative to itself. This lost phase information is recovered by having point, or otherwise known, sources within the field-of-view. The reference source phase is known and utilized as a constraint to recover the coherent phase relation between the baseline cubes and is key to the image synthesis. Described will be the mathematical formalism, with phase referencing and results will be shown using data collected from NASA/GSFC Wide-Field Imaging Interferometry Testbed (WIIT).

3D Radiative Transfer Effects in Multi-Angle/Multi-Spectral Radio-Polarimetric Signals from a Mixture of Clouds and Aerosols Viewed by a Non-Imaging Sensor

NASA Technical Reports Server (NTRS)

Davis, Anthony B.; Garay, Michael J.; Xu, Feng; Qu, Zheng; Emde, Claudia

2013-01-01

When observing a spatially complex mix of aerosols and clouds in a single relatively large field-of-view, nature entangles their signals non-linearly through polarized radiation transport processes that unfold in the 3D position and direction spaces. In contrast, any practical forward model in a retrieval algorithm will use only 1D vector radiative transfer (vRT) in a linear mixing technique. We assess the difference between the observed and predicted signals using synthetic data from a high-fidelity 3D vRT model with clouds generated using a Large Eddy Simulation model and an aerosol climatology. We find that this difference is signal--not noise--for the Aerosol Polarimetry Sensor (APS), an instrument developed by NASA. Moreover, the worst case scenario is also the most interesting case, namely, when the aerosol burden is large, hence hase the most impact on the cloud microphysics and dynamics. Based on our findings, we formulate a mitigation strategy for these unresolved cloud adjacency effects assuming that some spatial information is available about the structure of the clouds at higher resolution from "context" cameras, as was planned for NASA's ill-fated Glory mission that was to carry the APS but failed to reach orbit. Application to POLDER (POLarization and Directionality of Earth Reflectances) data from the period when PARASOL (Polarization and Anisotropy of Reflectances for Atmospheric Sciences coupled with Observations from a Lidar) was in the A-train is briefly discussed.

Coupled retrieval of aerosol properties and land surface reflection using the Airborne Multiangle SpectroPolarimetric Imager

NASA Astrophysics Data System (ADS)

Xu, Feng; van Harten, Gerard; Diner, David J.; Kalashnikova, Olga V.; Seidel, Felix C.; Bruegge, Carol J.; Dubovik, Oleg

2017-07-01

The Airborne Multiangle SpectroPolarimetric Imager (AirMSPI) has been flying aboard the NASA ER-2 high-altitude aircraft since October 2010. In step-and-stare operation mode, AirMSPI acquires radiance and polarization data in bands centered at 355, 380, 445, 470*, 555, 660*, 865*, and 935 nm (* denotes polarimetric bands). The imaged area covers about 10 km by 11 km and is typically observed from nine viewing angles between ±66° off nadir. For a simultaneous retrieval of aerosol properties and surface reflection using AirMSPI, an efficient and flexible retrieval algorithm has been developed. It imposes multiple types of physical constraints on spectral and spatial variations of aerosol properties as well as spectral and temporal variations of surface reflection. Retrieval uncertainty is formulated by accounting for both instrumental errors and physical constraints. A hybrid Markov-chain/adding-doubling radiative transfer (RT) model is developed to combine the computational strengths of these two methods in modeling polarized RT in vertically inhomogeneous and homogeneous media, respectively. Our retrieval approach is tested using 27 AirMSPI data sets with low to moderately high aerosol loadings, acquired during four NASA field campaigns plus one AirMSPI preengineering test flight. The retrieval results including aerosol optical depth, single-scattering albedo, aerosol size and refractive index are compared with Aerosol Robotic Network reference data. We identify the best angular combinations for 2, 3, 5, and 7 angle observations from the retrieval quality assessment of various angular combinations. We also explore the benefits of polarimetric and multiangular measurements and target revisits in constraining aerosol property and surface reflection retrieval.

Open-source software for collision detection in external beam radiation therapy

NASA Astrophysics Data System (ADS)

Suriyakumar, Vinith M.; Xu, Renee; Pinter, Csaba; Fichtinger, Gabor

2017-03-01

PURPOSE: Collision detection for external beam radiation therapy (RT) is important for eliminating the need for dryruns that aim to ensure patient safety. Commercial treatment planning systems (TPS) offer this feature but they are expensive and proprietary. Cobalt-60 RT machines are a viable solution to RT practice in low-budget scenarios. However, such clinics are hesitant to invest in these machines due to a lack of affordable treatment planning software. We propose the creation of an open-source room's eye view visualization module with automated collision detection as part of the development of an open-source TPS. METHODS: An openly accessible linac 3D geometry model is sliced into the different components of the treatment machine. The model's movements are based on the International Electrotechnical Commission standard. Automated collision detection is implemented between the treatment machine's components. RESULTS: The room's eye view module was built in C++ as part of SlicerRT, an RT research toolkit built on 3D Slicer. The module was tested using head and neck and prostate RT plans. These tests verified that the module accurately modeled the movements of the treatment machine and radiation beam. Automated collision detection was verified using tests where geometric parameters of the machine's components were changed, demonstrating accurate collision detection. CONCLUSION: Room's eye view visualization and automated collision detection are essential in a Cobalt-60 treatment planning system. Development of these features will advance the creation of an open-source TPS that will potentially help increase the feasibility of adopting Cobalt-60 RT.

SU-E-J-93: Development of Pre-Contoured Human Model Library in DICOM-RT Format for the Epidemiological Study of the Radiotherapy Patients

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pyakuryal, A; Lee, C; Lee, C

Purpose: Prior to 3D conformal radiation therapy planning, patient anatomy information was mostly limited to 2D beams-eye-view from the conventional simulator. To analyze the outcomes of such treatments for radiation late effects, 3D computational human models are often used in commercial treatment planning systems (TPSs). However, several underlying difficulties such as time-consuming manual delineation procedures of a large number of structures in the model have always limited its applications. Primary objective of this work was to develop a human model library for the epidemiological study by converting 3D-surface model organs to DICOM-RT format (DICOM-RT structure) using an in-house built software.more » We converted the ICRP reference human models to DICOM-RT models, which can be readily adopted for various dose calculations. Methods: MATLAB based code were utilized to convert the contour drawings extracted in text-format from the 3D graphic-tool, Rhinoceros into DICOM-RT structure format for 50 different organs of each model using a 16GB dual-core processor. The conversion periods were measured for each DICOM-RT models, and the reconstructed structure volumes were validated against the original 3D-surface models in the TPS. Ten reference hybrid whole-body models (8-pediatric and 2-adults) were automatically processed to create DICOM-RT computational human model library. Results: Mean contour conversion period was found to be 580 (N=2) and 394.5 (N=8) seconds for 50 organs in the adult and pediatric models respectively. A good agreement for large organs (NRMSD <1.0%) and small organs (NRMSD <7.7%) was also observed between the original volumes and corresponding DICOM-RT structure volumes of the organs. Conclusion: The ICRP reference human models were converted into DICOM-RT format to support the epidemiological study using a large cohort of conventional radiotherapy patients. Due to its DICOM-compatibility, the library may be implemented to many other different applications. We also expect to develop the library by including additional models in future.« less

Potential Utility of the Real-Time TMPA-RT Precipitation Estimates in Streamflow Prediction

NASA Technical Reports Server (NTRS)

Su, Fengge; Gao, Huilin; Huffman, George J.; Lettenmaier, Dennis P.

2010-01-01

We investigate the potential utility of the real-time Tropical Rainfall Measuring Mission (TRMM) Multi-satellite Precipitation Analysis (TMPA-RT) data for streamflow prediction, both through direct comparisons of TMPA-RT estimates with a gridded gauge product, and through evaluation of streamflow simulations over four tributaries of La Plata Basin (LPB) in South America using the two precipitation products. Our assessments indicate that the relative accuracy and the hydrologic performance of TMPA-RT-based streamflow simulations generally improved after February 2005. The improvements in TMPA-RT since 2005 are closely related to upgrades in the TMPA-RT algorithm in early February, 2005 which include use of additional microwave sensors (AMSR-E and AMSU-B) and implementation of different calibration schemes. Our work suggests considerable potential for hydrologic prediction using purely satellite-derived precipitation estimates (no adjustments by in situ gauges) in parts of the globe where in situ observations are sparse.

The Spectral Image Processing System (SIPS): Software for integrated analysis of AVIRIS data

NASA Technical Reports Server (NTRS)

Kruse, F. A.; Lefkoff, A. B.; Boardman, J. W.; Heidebrecht, K. B.; Shapiro, A. T.; Barloon, P. J.; Goetz, A. F. H.

1992-01-01

The Spectral Image Processing System (SIPS) is a software package developed by the Center for the Study of Earth from Space (CSES) at the University of Colorado, Boulder, in response to a perceived need to provide integrated tools for analysis of imaging spectrometer data both spectrally and spatially. SIPS was specifically designed to deal with data from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and the High Resolution Imaging Spectrometer (HIRIS), but was tested with other datasets including the Geophysical and Environmental Research Imaging Spectrometer (GERIS), GEOSCAN images, and Landsat TM. SIPS was developed using the 'Interactive Data Language' (IDL). It takes advantage of high speed disk access and fast processors running under the UNIX operating system to provide rapid analysis of entire imaging spectrometer datasets. SIPS allows analysis of single or multiple imaging spectrometer data segments at full spatial and spectral resolution. It also allows visualization and interactive analysis of image cubes derived from quantitative analysis procedures such as absorption band characterization and spectral unmixing. SIPS consists of three modules: SIPS Utilities, SIPS_View, and SIPS Analysis. SIPS version 1.1 is described below.

LabVIEW-based control and data acquisition system for cathodoluminescence experiments.

PubMed

Bok, J; Schauer, P

2011-11-01

Computer automation of cathodoluminescence (CL) experiments using equipment developed in our laboratory is described. The equipment provides various experiments for CL efficiency, CL spectra, and CL time response studies. The automation was realized utilizing the graphical programming environment LabVIEW. The developed application software with procedures for equipment control and data acquisition during various CL experiments is presented. As the measured CL data are distorted by technical limitations of the equipment, such as equipment spectral sensitivity and time response, data correction algorithms were incorporated into the procedures. Some examples of measured data corrections are presented. © 2011 American Institute of Physics

Bio-Optics of the Chesapeake Bay from Measurements and Radiative Transfer Calculations

NASA Technical Reports Server (NTRS)

Tzortziou, Maria; Herman, Jay R.; Gallegos, Charles L.; Neale, Patrick J.; Subramaniam, Ajit; Harding, Lawrence W., Jr.; Ahmad, Ziauddin

2005-01-01

We combined detailed bio-optical measurements and radiative transfer (RT) modeling to perform an optical closure experiment for optically complex and biologically productive Chesapeake Bay waters. We used this experiment to evaluate certain assumptions commonly used when modeling bio-optical processes, and to investigate the relative importance of several optical characteristics needed to accurately model and interpret remote sensing ocean-color observations in these Case 2 waters. Direct measurements were made of the magnitude, variability, and spectral characteristics of backscattering and absorption that are critical for accurate parameterizations in satellite bio-optical algorithms and underwater RT simulations. We found that the ratio of backscattering to total scattering in the mid-mesohaline Chesapeake Bay varied considerably depending on particulate loading, distance from land, and mixing processes, and had an average value of 0.0128 at 530 nm. Incorporating information on the magnitude, variability, and spectral characteristics of particulate backscattering into the RT model, rather than using a volume scattering function commonly assumed for turbid waters, was critical to obtaining agreement between RT calculations and measured radiometric quantities. In situ measurements of absorption coefficients need to be corrected for systematic overestimation due to scattering errors, and this correction commonly employs the assumption that absorption by particulate matter at near infrared wavelengths is zero.

Characterizing the utility of the TMPA real-time product for hydrologic predictions over global river basins across scales

NASA Astrophysics Data System (ADS)

Gao, H.; Zhang, S.; Nijssen, B.; Zhou, T.; Voisin, N.; Sheffield, J.; Lee, K.; Shukla, S.; Lettenmaier, D. P.

2017-12-01

Despite its errors and uncertainties, the Tropical Rainfall Measuring Mission (TRMM) Multi-satellite Precipitation Analysis real-time product (TMPA-RT) has been widely used for hydrological monitoring and forecasting due to its timely availability for real-time applications. To evaluate the utility of TMPA-RT in hydrologic predictions, many studies have compared modeled streamflows driven by TMPA-RT against gauge data. However, because of the limited availability of streamflow observations in data sparse regions, there is still a lack of comprehensive comparisons for TMPA-RT based hydrologic predictions at the global scale. Furthermore, it is expected that its skill is less optimal at the subbasin scale than the basin scale. In this study, we evaluate and characterize the utility of the TMPA-RT product over selected global river basins during the period of 1998 to 2015 using the TMPA research product (TMPA-RP) as a reference. The Variable Infiltration Capacity (VIC) model, which was calibrated and validated previously, is adopted to simulate streamflows driven by TMPA-RT and TMPA-RP, respectively. The objective of this study is to analyze the spatial and temporal characteristics of the hydrologic predictions by answering the following questions: (1) How do the precipitation errors associated with the TMPA-RT product transform into streamflow errors with respect to geographical and climatological characteristics? (2) How do streamflow errors vary across scales within a basin?

Multiband selection with linear array detectors

NASA Technical Reports Server (NTRS)

Richard, H. L.; Barnes, W. L.

1985-01-01

Several techniques that can be used in an earth-imaging system to separate the linear image formed after the collecting optics into the desired spectral band are examined. The advantages and disadvantages of the Multispectral Linear Array (MLA) multiple optics, the MLA adjacent arrays, the imaging spectrometer, and the MLA beam splitter are discussed. The beam-splitter design approach utilizes, in addition to relatively broad spectral region separation, a movable Multiband Selection Device (MSD), placed between the exit ports of the beam splitter and a linear array detector, permitting many bands to be selected. The successful development and test of the MSD is described. The device demonstrated the capacity to provide a wide field of view, visible-to-near IR/short-wave IR and thermal IR capability, and a multiplicity of spectral bands and polarization measuring means, as well as a reasonable size and weight at minimal cost and risk compared to a spectrometer design approach.

Real-Time Data Display

NASA Technical Reports Server (NTRS)

Pedings, Marc

2007-01-01

RT-Display is a MATLAB-based data acquisition environment designed to use a variety of commercial off-the-shelf (COTS) hardware to digitize analog signals to a standard data format usable by other post-acquisition data analysis tools. This software presents the acquired data in real time using a variety of signal-processing algorithms. The acquired data is stored in a standard Operator Interactive Signal Processing Software (OISPS) data-formatted file. RT-Display is primarily configured to use the Agilent VXI (or equivalent) data acquisition boards used in such systems as MIDDAS (Multi-channel Integrated Dynamic Data Acquisition System). The software is generalized and deployable in almost any testing environment, without limitations or proprietary configuration for a specific test program or project. With the Agilent hardware configured and in place, users can start the program and, in one step, immediately begin digitizing multiple channels of data. Once the acquisition is completed, data is converted into a common binary format that also can be translated to specific formats used by external analysis software, such as OISPS and PC-Signal (product of AI Signal Research Inc.). RT-Display at the time of this reporting was certified on Agilent hardware capable of acquisition up to 196,608 samples per second. Data signals are presented to the user on-screen simultaneously for 16 channels. Each channel can be viewed individually, with a maximum capability of 160 signal channels (depending on hardware configuration). Current signal presentations include: time data, fast Fourier transforms (FFT), and power spectral density plots (PSD). Additional processing algorithms can be easily incorporated into this environment.

Development of a rapid diagnostic assay for the detection of tomato chlorotic dwarf viroid based on isothermal reverse-transcription-recombinase polymerase amplification.

PubMed

Hammond, Rosemarie W; Zhang, Shulu

2016-10-01

A molecular diagnostic assay utilizing reverse transcription-recombinase polymerase amplification (RT-RPA) at an isothermal constant temperature of 39°C and target-specific primers and probe were developed for the rapid, sensitive, and specific detection of tomato chlorotic dwarf viroid (TCDVd) in infected leaf and seed tissues. The performance of the AmplifyRP(®) Acceler8™ RT-RPA diagnostic assay, utilizing a lateral flow strip contained within an amplicon detection chamber, was evaluated and the results were compared with a standard RT-PCR assay. The AmplifyRP(®) Acceler8™ assay was specific for TCDVd in leaf and seed tissues, its sensitivity was comparable to conventional RT-PCR in leaf tissues, and it does not require extensive sample purification, specialized equipment, or technical expertise. This is the first report utilizing an RT-RPA assay to detect viroids and the assay can be used both in the laboratory and in the field for TCDVd detection. Published by Elsevier B.V.

Generalized Radiative Transfer as an Efficient Computational Tool for Spatial and/or Spectral Integration over Unresolved Variability in Multi-Angle Observations

NASA Astrophysics Data System (ADS)

Davis, A. B.; Xu, F.; Diner, D. J.

2017-12-01

Two perennial problems in applied theoretical and computational radiative transfer (RT) are: (1) the impact of unresolved spatial variability on large-scale fluxes (in climate models) or radiances (in remote sensing); and (2) efficient-yet-accurate estimation of broadband spectral integrals in radiant energy budget estimation as well as in remote sensing, in particular, of trace gases.Generalized RT (GRT) is a modification of classic RT in an optical medium with uniform extinction where Beer's exponential law for direct transmission is replaced by a monotonically decreasing function with a slower power-law decay. In a convenient parameterized version of GRT, mean extinction replaces the uniform value and just one new property is introduced. As a non-dimensional metric for the unresolved variability, we use the square of the mean extinction coefficient divided by its variance. This parameter is also the exponent of the power-law tail of the modified transmission law.This specific form of sub-exponential transmission has explored for almost two decades in application to spatial variability in the presence of long-range correlations, much like in turbulent media such as clouds, with a focus on multiple scattering. It has also been proposed by Conley and Collins (JQSRT, 112, 1525-, 2011) to improve on the standard (weak-line) implementation of the correlated-k technique for efficient spectral integration.We have merged these two applications within a rigorous formulation of the combined problem, and solve the new integral RT equations in the single-scattering limit. The result is illustrated by addressing practical problems in multi-angle remote sensing of aerosols using the O2 A-band, an emerging methodology for passive profiling of coarse aerosols and clouds.

Hydrothermal upgrading of algae paste: Inorganics and recycling potential in the aqueous phase.

PubMed

Patel, Bhavish; Guo, Miao; Chong, Chinglih; Sarudin, Syazwani Hj Mat; Hellgardt, Klaus

2016-10-15

Hydrothermal Liquefaction (HTL) for algal biomass conversion is a promising technology capable of producing high yields of biocrude as well as partitioning even higher quantity of nutrients in the aqueous phase. To assess the feasibility of utilizing the aqueous phase, HTL of Nannochloropsis sp. was carried out in the temperature range of 275 to 350°C and Residence Times (RT) ranging between 5 and 60min The effect of reaction conditions on the NO3(-),PO4(3-),SO4(2-),Cl(-),Na(+),andK(+) ions as well as Chemical Oxygen Demand (COD) and pH was investigated with view of recycling the aqueous phase for either cultivation or energy generation via Anaerobic Digestion (AD), quantified via Lifecycle Assessment (LCA). It addition to substantial nutrient partitioning at short RT, an increase in alkalinity to almost pH10 and decrease in COD at longer RT was observed. The LCA investigation found reaction conditions of 275°C/30min and 350°C/10min to be most suitable for nutrient and energy recovery but both processing routes offer environmental benefit at all reaction conditions, however recycling for cultivation has marginally better environmental credentials compared to AD. Copyright © 2016 Elsevier B.V. All rights reserved.

Scene recognition following locomotion around a scene.

PubMed

Motes, Michael A; Finlay, Cory A; Kozhevnikov, Maria

2006-01-01

Effects of locomotion on scene-recognition reaction time (RT) and accuracy were studied. In experiment 1, observers memorized an 11-object scene and made scene-recognition judgments on subsequently presented scenes from the encoded view or different views (ie scenes were rotated or observers moved around the scene, both from 40 degrees to 360 degrees). In experiment 2, observers viewed different 5-object scenes on each trial and made scene-recognition judgments from the encoded view or after moving around the scene, from 36 degrees to 180 degrees. Across experiments, scene-recognition RT increased (in experiment 2 accuracy decreased) with angular distance between encoded and judged views, regardless of how the viewpoint changes occurred. The findings raise questions about conditions in which locomotion produces spatially updated representations of scenes.

A Real-Time Linux for Multicore Platforms

DTIC Science & Technology

2013-12-20

under ARO support) to obtain a fully-functional OS for supporting real-time workloads on multicore platforms. This system, called LITMUS -RT...to be specified as plugin components. LITMUS -RT is open-source software (available at The views, opinions and/or findings contained in this report... LITMUS -RT (LInux Testbed for MUltiprocessor Scheduling in Real-Time systems), allows different multiprocessor real-time scheduling and

Efficient Optical Logic, Interconnections and Processing Using Quantum Confined Structures

DTIC Science & Technology

1993-05-20

mnounced D ELECTE j LL.,iicEtion ......... -..................- JUN 14 1993 B y .. . ........ . . . . . .. Di~t ibution l Availability Codes Avail...coefficient of rt( b ) and power reflectivity of RT( B )=lrt( b )12 , viewed from the cavity. RB>RT is used in the design. Written in terms of the power...reflectivities, the total power reflectivity from the Fabry-Perot is given by: p lf-RT. R-f-• B exp(-.al)1 2 I ~ ~l .•RTRBeXp(._C.)j2 Assuming RB=0.97, Figure

Osteoradionecrosis of the subaxial cervical spine following treatment for head and neck carcinomas.

PubMed

Khorsandi, A S; Su, H K; Mourad, W F; Urken, M L; Persky, M S; Lazarus, C L; Jacobson, A S

2015-01-01

To study MRI and positron emission tomography (PET)/CT imaging of osteoradionecrosis (ORN) of the subaxial cervical spine, a serious long-term complication of radiation therapy (RT) for head and neck cancers that can lead to pain, vertebral instability, myelopathy and cord compression. This is a single-institution retrospective review of patients diagnosed and treated for ORN of the subaxial cervical spine following surgery and radiation for head and neck cancer. We report PET/CT imaging and MRI for four patients, each with extensive treatment for recurrent head and neck cancer. Osteomyelitis (OM) and discitis are the end-stage manifestations of ORN of the subaxial spine. ORN of the subaxial spine has variable imaging appearance and needs to be differentiated from recurrent or metastatic disease. Surgical violation of the posterior pharyngeal wall on top of the compromised vasculature in patients treated heavily with RT may pre-dispose the subaxial cervical vertebrae to ORN, with possible resultant OM and discitis. MRI and PET/CT imaging are complimentary in this setting. PET/CT images may be misinterpreted in view of the history of head and neck cancer. MRI should be utilized for definitive diagnosis of OM and discitis in view of its imaging specificity. We identify the end-stage manifestation of ORN in the sub-axial spine on PET/CT and MRI to facilitate its correct diagnosis.

Near Real-Time Applications of Earth Remote Sensing for Response to Meteorological Disasters

NASA Technical Reports Server (NTRS)

Molthan, Andrew L.; Burks, Jason E.; McGrath, Kevin M.; Bell, Jordan R.

2013-01-01

Numerous on-orbit satellites provide a wide range of spatial, spectral, and temporal resolutions supporting the use of their resulting imagery in assessments of disasters that are meteorological in nature. This presentation will provide an overview of recent use of Earth remote sensing by NASA's Short-term Prediction Research and Transition (SPoRT) Center in response to disaster activities in 2012 and 2013, along with case studies supporting ongoing research and development. The SPoRT Center, with support from NASA's Applied Sciences Program, has explored a variety of new applications of Earth-observing sensors to support disaster response. In May 2013, the SPoRT Center developed unique power outage composites representing the first clear sky view of damage inflicted upon Moore and Oklahoma City, Oklahoma following the devastating EF-5 tornado that occurred on May 20. Subsequent ASTER, MODIS, Landsat-7 and Landsat-8 imagery help to identify the damaged area. Higher resolution imagery of Moore, Oklahoma were provided by commercial satellites and the recently available International Space Station (ISS) SERVIR Environmental Research and Visualization System (ISERV) instrument. New techniques are being explored by the SPoRT team in order to better identify damage visible in high resolution imagery, and to monitor ongoing recovery for Moore, Oklahoma. Other applications are being developed to refine light source detections with the VIIRS day-night band and to map hail during the growing season through combination of available satellite and radar imagery. The aforementioned products and support are not useful unless they are distributed in a timely manner and within an appropriate decision support system. This presentation will provide an update on ongoing activities to support inclusion of these data sets within the NOAA National Weather Service Damage Assessment Toolkit, which allows meteorologists in the field to consult available satellite imagery while performing their damage assessment.

Near Real-­Time Applications of Earth Remote Sensing for Response to Meteorological Disasters

NASA Technical Reports Server (NTRS)

Molthan, Andrew L.; Burks, Jason E.; McGrath, Kevin M.; Bell, Jordan R.

2013-01-01

Numerous on-orbit satellites provide a wide range of spatial, spectral, and temporal resolutions supporting the use of their resulting imagery in assessments of disasters that are meteorological in nature. This presentation will provide an overview of recent use of Earth remote sensing by NASA's Short-term Prediction Research and Transition (SPoRT) Center in response to disaster activities in 2012 and 2013, along with case studies supporting ongoing research and development. The SPoRT Center, with support from NASA's Applied Sciences Program, has explored a variety of new applications of Earth-observing sensors to support disaster response. In May 2013, the SPoRT Center developed unique power outage composites representing the first clear sky view of damage inflicted upon Moore and Oklahoma City, Oklahoma following the devastating EF-5 tornado that occurred on May 20. Subsequent ASTER, MODIS, Landsat-7 and Landsat-8 imagery help to identify the damaged area. Higher resolution imagery of Moore, Oklahoma were provided by commercial satellites and the recently available International Space Station (ISS) SERVIR Environmental Research and Visualization System (ISERV) instrument. New techniques are being explored by the SPoRT team in order to better identify damage visible in high resolution imagery, and to monitor ongoing recovery for Moore, Oklahoma. Other applications are being developed to refine light source detections with the VIIRS day-night band and to map hail during the growing season through combination of available satellite and radar imagery. The aforementioned products and support are not useful unless they are distributed in a timely manner and within an appropriate decision support system. This presentation will provide an update on ongoing activities to support inclusion of these data sets within the NOAA National Weather Service Damage Assessment Toolkit, which allows meteorologists in the field to consult available satellite imagery while performing their damage assessment.

Variables separation of the spectral BRDF for better understanding color variation in special effect pigment coatings.

PubMed

Ferrero, Alejandro; Rabal, Ana María; Campos, Joaquín; Pons, Alicia; Hernanz, María Luisa

2012-06-01

A type of representation of the spectral bidirectional reflectance distribution function (BRDF) is proposed that distinctly separates the spectral variable (wavelength) from the geometrical variables (spherical coordinates of the irradiation and viewing directions). Principal components analysis (PCA) is used in order to decompose the spectral BRDF in decorrelated spectral components, and the weight that they have at every geometrical configuration of irradiation/viewing is established. This method was applied to the spectral BRDF measurement of a special effect pigment sample, and four principal components with relevant variance were identified. These four components are enough to reproduce the great diversity of spectral reflectances observed at different geometrical configurations. Since this representation is able to separate spectral and geometrical variables, it facilitates the interpretation of the color variation of special effect pigments coatings versus the geometrical configuration of irradiation/viewing.

Decomposing Intra-Subject Variability in Children with Attention-Deficit/Hyperactivity Disorder

PubMed Central

Di Martino, Adriana; Ghaffari, Manely; Curchack, Jocelyn; Reiss, Philip; Hyde, Christopher; Vannucci, Marina; Petkova, Eva; Klein, Donald F.; Castellanos, F. Xavier

2009-01-01

Background Increased intra-subject response time standard deviations (RT-SD) discriminate children with Attention-Deficit/Hyperactivity Disorder (ADHD) from healthy controls. RT-SD is averaged over time, thus it does not provide information about the temporal structure of response time variability. We previously hypothesized that such increased variability may be related to slow spontaneous fluctuations in brain activity occurring with periods between 15s and 40s. Here, we investigated whether these slow response time fluctuations add unique differentiating information beyond the global increase in RT-SD. Methods We recorded RT at 3s intervals for 15 minutes during an Eriksen flanker task for 29 children with ADHD and 26 age-matched typically developing controls (TDC) (mean ages 12.5 ± 2.4 and 11.6 ± 2.5; 26 and 12 boys, respectively). The primary outcome was the magnitude of the spectral component in the frequency range between 0.027 and 0.073 Hz measured with continuous Morlet wavelet transform. Results The magnitude of the low frequency fluctuation was greater for children with ADHD compared to TDC (p=0.02, d= 0.69). After modeling ADHD diagnosis as a function of RT-SD, adding this specific frequency range significantly improved the model fit (p=0.03; odds ratio= 2.58). Conclusions Fluctuations in low frequency response time variability predict the diagnosis of ADHD beyond the effect associated with global differences in variability. Future studies will examine whether such spectrally specific fluctuations in behavioral responses are linked to intrinsic regional cerebral hemodynamic oscillations which occur at similar frequencies. PMID:18423424

Lineshape spectroscopy with a very high resolution, very high signal-to-noise crystal spectrometer

DOE PAGES

Beiersdorfer, P.; Magee, E. W.; Brown, G. V.; ...

2016-06-06

Here, we have developed a high-resolution x-ray spectrometer for measuring the shapes of spectral lines produced from laser-irradiated targets on the Orion laser facility. The instrument utilizes a spherically bent crystal geometry to spatially focus and spectrally analyze photons from foil or microdot targets. The high photon collection efficiency resulting from its imaging properties allows the instrument to be mounted outside the Orion chamber, where it is far less sensitive to particles, hard x-rays, or electromagnetic pulses than instruments housed close to the target chamber center in ten-inch manipulators. Moreover, Bragg angles above 50° are possible, which provide greatly improvedmore » spectral resolution compared to radially viewing, near grazing-incidence crystal spectrometers. These properties make the new instrument an ideal lineshape diagnostic for determining plasma temperature and density. We describe its calibration on the Livermore electron beam ion trap facility and present spectral data of the K-shell emission from highly charged sulfur produced by long-pulse as well as short-pulse beams on the Orion laser in the United Kingdom.« less

Lineshape spectroscopy with a very high resolution, very high signal-to-noise crystal spectrometer

NASA Astrophysics Data System (ADS)

Beiersdorfer, P.; Magee, E. W.; Brown, G. V.; Chen, H.; Emig, J.; Hell, N.; Bitter, M.; Hill, K. W.; Allan, P.; Brown, C. R. D.; Hill, M. P.; Hoarty, D. J.; Hobbs, L. M. R.; James, S. F.

2016-06-01

We have developed a high-resolution x-ray spectrometer for measuring the shapes of spectral lines produced from laser-irradiated targets on the Orion laser facility. The instrument utilizes a spherically bent crystal geometry to spatially focus and spectrally analyze photons from foil or microdot targets. The high photon collection efficiency resulting from its imaging properties allows the instrument to be mounted outside the Orion chamber, where it is far less sensitive to particles, hard x-rays, or electromagnetic pulses than instruments housed close to the target chamber center in ten-inch manipulators. Moreover, Bragg angles above 50° are possible, which provide greatly improved spectral resolution compared to radially viewing, near grazing-incidence crystal spectrometers. These properties make the new instrument an ideal lineshape diagnostic for determining plasma temperature and density. We describe its calibration on the Livermore electron beam ion trap facility and present spectral data of the K-shell emission from highly charged sulfur produced by long-pulse as well as short-pulse beams on the Orion laser in the United Kingdom.

Utility of an Australasian registry for children undergoing radiation treatment.

PubMed

Ahern, Verity

2014-12-01

The aim of this study was to evaluate the utility of an Australasian registry ('the Registry') for children undergoing radiation treatment (RT). Children under the age of 16 years who received a course of radiation between January 1997 and December 2010 and were enrolled on the Registry form the subjects of this study. A total of 2232 courses of RT were delivered, predominantly with radical intent (87%). Registrations fluctuated over time, but around one-half of children diagnosed with cancer undergo a course of RT. The most prevalent age range at time of RT was 10-15 years, and the most common diagnoses were central nervous system tumours (34%) and acute lymphoblastic leukaemia (20%). The Registry provides a reflection of the patterns of care of children undergoing RT in Australia and a mechanism for determining the resources necessary to manage children by RT (human, facilities and emerging technologies, such as proton therapy). It lacks the detail to provide information on radiotherapy quality and disease outcomes which should be the subject of separate audit studies. The utility of the Registry has been hampered by its voluntary nature and varying needs for consent. Completion of registry forms is a logical requirement for inclusion in the definition of a subspecialist in paediatric radiation oncology. © 2014 The Royal Australian and New Zealand College of Radiologists.

Transitioning NPOESS Data to Weather Offices: The SPoRT Paradigm with EOS Data

NASA Technical Reports Server (NTRS)

Jedlovec, Gary

2009-01-01

Real-time satellite information provides one of many data sources used by NWS weather forecast offices (WFOs) to diagnose current weather conditions and to assist in short-term forecast preparation. While GOES satellite data provides relatively coarse spatial resolution coverage of the continental U.S. on a 10-15 minute repeat cycle, polar orbiting imagery has the potential to provide snapshots of weather conditions at high-resolution in many spectral channels. Additionally, polar orbiting sounding data can provide additional information on the thermodynamic structure of the atmosphere in data sparse regions of at asynoptic observation times. The NASA Short-term Prediction Research and Transition (SPoRT) project has demonstrated the utility of polar orbiting MODIS and AIRS data on the Terra and Aqua satellites to improve weather diagnostics and short-term forecasting on the regional and local scales. SPoRT scientists work directly forecasters at selected WFOS in the Southern Region (SR) to help them ingest these unique data streams into their AWIPS system, understand how to use the data (through on-site and distance learn techniques), and demonstrate the utility of these products to address significant forecast problems. This process also prepares forecasters for the use of similar observational capabilities from NPOESS operational sensors. NPOESS environmental data records (EDRs) from the Visible 1 Infrared Imager I Radiometer Suite (VIIRS), the Cross-track Infrared Sounder (CrlS) and Advanced Technology Microwave Sounder (ATMS) instruments and additional value-added products produced by NESDIS will be available in near real-time and made available to WFOs to extend their use of NASA EOS data into the NPOESS era. These new data streams will be integrated into the NWs's new AWIPS II decision support tools. The AWIPS I1 system to be unveiled in WFOs in 2009 will be a JAVA-based decision support system which preserves the functionality of the existing systems and offers unique development opportunities for new data sources and applications in the Service Orientated Architecture ISOA) environment. This paper will highlight some of the SPoRT activities leading to the integration of VllRS and CrIS/ATMS data into the display capabilities of these new systems to support short-term forecasting problems at WFOs.

Automated, per pixel Cloud Detection from High-Resolution VNIR Data

NASA Technical Reports Server (NTRS)

Varlyguin, Dmitry L.

2007-01-01

CASA is a fully automated software program for the per-pixel detection of clouds and cloud shadows from medium- (e.g., Landsat, SPOT, AWiFS) and high- (e.g., IKONOS, QuickBird, OrbView) resolution imagery without the use of thermal data. CASA is an object-based feature extraction program which utilizes a complex combination of spectral, spatial, and contextual information available in the imagery and the hierarchical self-learning logic for accurate detection of clouds and their shadows.

Photophysics of GaN single-photon emitters in the visible spectral range

NASA Astrophysics Data System (ADS)

Berhane, Amanuel M.; Jeong, Kwang-Yong; Bradac, Carlo; Walsh, Michael; Englund, Dirk; Toth, Milos; Aharonovich, Igor

2018-04-01

In this work, we present a detailed photophysical analysis of recently discovered, optically stable single-photon emitters (SPEs) in gallium nitride (GaN). Temperature-resolved photoluminescence measurements reveal that the emission lines at 4 K are three orders of magnitude broader than the transform-limited width expected from excited-state lifetime measurements. The broadening is ascribed to ultrafast spectral diffusion. The photophysical study on several emitters at room temperature (RT) reveals an average brightness of (427 ±215 )kCounts /s . Finally, polarization measurements from 14 emitters are used to determine visibility as well as dipole orientation of defect systems within the GaN crystal. Our results underpin some of the fundamental properties of SPEs in GaN both at cryogenic and RT, and define the benchmark for future work in GaN-based single-photon technologies.

Simultaneous Chandra/Swift Observations of the RT Cru Symbiotic System

NASA Astrophysics Data System (ADS)

Kashyap, Vinay; Kennea, J. A.; Karovska, M.; Calibration, Chandra

2013-04-01

The symbiotic star RT Cru was observed simultaneously by the Chandra/HRC-I and Swift/XRT in Dec 2012. The observations were carried out as part of a program to calibrate the Chandra PSF. The Chandra light curve shows a number of brightenings by factors of 2, with strong indications of a softening of the spectrum at these times. Swift observations cover a brief part of the Chandra light curve, and the intensities over this duration are tightly correlated. The Swift spectral data confirm the anticorrelation between intensity and spectral hardness. However, there are differences in the correlations at different periods that are not understood. We report on our analysis of the data, with emphasis on the spectral modeling at different times and intensity levels, and discuss the implications of the results on the emission mechanisms on symbiotic stars. We also report our inferences on the structure and energy dependence of the Chandra PSF anomaly, and on the high-energy cross-calibration between the HRC-I and XRT. This work is supported by the NASA contract NAS8-03060 to the Chandra X-ray Center.

3D Spatial and Spectral Fusion of Terrestrial Hyperspectral Imagery and Lidar for Hyperspectral Image Shadow Restoration Applied to a Geologic Outcrop

NASA Astrophysics Data System (ADS)

Hartzell, P. J.; Glennie, C. L.; Hauser, D. L.; Okyay, U.; Khan, S.; Finnegan, D. C.

2016-12-01

Recent advances in remote sensing technology have expanded the acquisition and fusion of active lidar and passive hyperspectral imagery (HSI) from an exclusively airborne technique to terrestrial modalities. This enables high resolution 3D spatial and spectral quantification of vertical geologic structures for applications such as virtual 3D rock outcrop models for hydrocarbon reservoir analog analysis and mineral quantification in open pit mining environments. In contrast to airborne observation geometry, the vertical surfaces observed by horizontal-viewing terrestrial HSI sensors are prone to extensive topography-induced solar shadowing, which leads to reduced pixel classification accuracy or outright removal of shadowed pixels from analysis tasks. Using a precisely calibrated and registered offset cylindrical linear array camera model, we demonstrate the use of 3D lidar data for sub-pixel HSI shadow detection and the restoration of the shadowed pixel spectra via empirical methods that utilize illuminated and shadowed pixels of similar material composition. We further introduce a new HSI shadow restoration technique that leverages collocated backscattered lidar intensity, which is resistant to solar conditions, obtained by projecting the 3D lidar points through the HSI camera model into HSI pixel space. Using ratios derived from the overlapping lidar laser and HSI wavelengths, restored shadow pixel spectra are approximated using a simple scale factor. Simulations of multiple lidar wavelengths, i.e., multi-spectral lidar, indicate the potential for robust HSI spectral restoration that is independent of the complexity and costs associated with rigorous radiometric transfer models, which have yet to be developed for horizontal-viewing terrestrial HSI sensors. The spectral restoration performance is quantified through HSI pixel classification consistency between full sun and partial sun exposures of a single geologic outcrop.

New developments of a knowledge based system (VEG) for inferring vegetation characteristics

NASA Technical Reports Server (NTRS)

Kimes, D. S.; Harrison, P. A.; Harrison, P. R.

1992-01-01

An extraction technique for inferring physical and biological surface properties of vegetation using nadir and/or directional reflectance data as input has been developed. A knowledge-based system (VEG) accepts spectral data of an unknown target as input, determines the best strategy for inferring the desired vegetation characteristic, applies the strategy to the target data, and provides a rigorous estimate of the accuracy of the inference. Progress in developing the system is presented. VEG combines methods from remote sensing and artificial intelligence, and integrates input spectral measurements with diverse knowledge bases. VEG has been developed to (1) infer spectral hemispherical reflectance from any combination of nadir and/or off-nadir view angles; (2) test and develop new extraction techniques on an internal spectral database; (3) browse, plot, or analyze directional reflectance data in the system's spectral database; (4) discriminate between user-defined vegetation classes using spectral and directional reflectance relationships; and (5) infer unknown view angles from known view angles (known as view angle extension).

VARIATION OF THE EXPRESSION OF ENDOGENOUS "HOUSEKEEPING" GENES IN B[A]P TREATED MOUSE LUNGS MEASURED BY qRT-PCR

EPA Science Inventory

Quantitative RT-PCR is frequently used to analyze gene expression in different experimental systems. In this assay, housekeeping genes are frequently used to normalize for the variability between samples (relative quantification). We have examined the utility of using qRT-PCR and...

Resonant transition-based quantum computation

NASA Astrophysics Data System (ADS)

Chiang, Chen-Fu; Hsieh, Chang-Yu

2017-05-01

In this article we assess a novel quantum computation paradigm based on the resonant transition (RT) phenomenon commonly associated with atomic and molecular systems. We thoroughly analyze the intimate connections between the RT-based quantum computation and the well-established adiabatic quantum computation (AQC). Both quantum computing frameworks encode solutions to computational problems in the spectral properties of a Hamiltonian and rely on the quantum dynamics to obtain the desired output state. We discuss how one can adapt any adiabatic quantum algorithm to a corresponding RT version and the two approaches are limited by different aspects of Hamiltonians' spectra. The RT approach provides a compelling alternative to the AQC under various circumstances. To better illustrate the usefulness of the novel framework, we analyze the time complexity of an algorithm for 3-SAT problems and discuss straightforward methods to fine tune its efficiency.

System design of the CRISM (compact reconnaissance imaging spectrometer for Mars) hyperspectral imager

NASA Astrophysics Data System (ADS)

Silverglate, Peter R.; Fort, Dennis E.

2004-01-01

CRISM (Compact Reconnaissance Imaging Spectrometer for Mars) is a hyperspectral imager that will be launched on the MRO (Mars Reconnaissance Orbiter) in August 2005. The MRO will circle Mars in a polar orbit at a nominal altitude of 325 km. The CRISM spectral range spans the ultraviolet (UV) to the mid-wave infrared (MWIR), 400 nm to 4050 nm. The instrument utilizes a Ritchey-Chretien telescope with a 2.06º field of view (FOV) to focus light on the entrance slit of a dual spectrometer. Within the spectrometer light is split by a dichroic into VNIR (visible-near infrared) (λ <= 1.05 μm) and IR (infrared) (λ >= 1.05 μm) beams. Each beam is directed into a separate modified Offner spectrometer that focuses a spectrally dispersed image of the slit onto a two dimensional focal plane (FP). The IR FP is a 640 x 480 HgCdTe area array; the VNIR FP is a 640 x 480 silicon photodiode area array. The spectral image is contiguously sampled with a 6.55 nm spectral spacing and an instantaneous field of view of 60 μradians. The orbital motion of the MRO pushbroom scans the spectrometer slit across the Martian surface, allowing the planet to be mapped in 558 spectral bands. There are four major mapping modes: A quick initial multi-spectral mapping of a major portion of the Martian surface in 59 selected spectral bands at a spatial resolution of 600 μradians (10:1 binning); an extended multi-spectral mapping of the entire Martian surface in 59 selected spectral bands at a spatial resolution of 300 μradians (5:1 binning); a high resolution Target Mode, performing hyperspectral mapping of selected targets of interest at full spatial and spectral resolution; and an atmospheric Emission Phase Function (EPF) mode for atmospheric study and correction at full spectral resolution at a spatial resolution of 300 μradians (5:1 binning). The instrument is gimbaled to allow scanning over +/-60° for the EPF and Target modes. The scanning also permits orbital motion compensation, enabling longer integration times and consequently higher signal-to-noise ratios for selected areas on the Martian surface in Target Mode.

System design of the CRISM (compact reconnaissance imaging spectrometer for Mars) hyperspectral imager

NASA Astrophysics Data System (ADS)

Silverglate, Peter R.; Fort, Dennis E.

2003-12-01

CRISM (Compact Reconnaissance Imaging Spectrometer for Mars) is a hyperspectral imager that will be launched on the MRO (Mars Reconnaissance Orbiter) in August 2005. The MRO will circle Mars in a polar orbit at a nominal altitude of 325 km. The CRISM spectral range spans the ultraviolet (UV) to the mid-wave infrared (MWIR), 400 nm to 4050 nm. The instrument utilizes a Ritchey-Chretien telescope with a 2.06º field of view (FOV) to focus light on the entrance slit of a dual spectrometer. Within the spectrometer light is split by a dichroic into VNIR (visible-near infrared) (λ <= 1.05 μm) and IR (infrared) (λ >= 1.05 μm) beams. Each beam is directed into a separate modified Offner spectrometer that focuses a spectrally dispersed image of the slit onto a two dimensional focal plane (FP). The IR FP is a 640 x 480 HgCdTe area array; the VNIR FP is a 640 x 480 silicon photodiode area array. The spectral image is contiguously sampled with a 6.55 nm spectral spacing and an instantaneous field of view of 60 μradians. The orbital motion of the MRO pushbroom scans the spectrometer slit across the Martian surface, allowing the planet to be mapped in 558 spectral bands. There are four major mapping modes: A quick initial multi-spectral mapping of a major portion of the Martian surface in 59 selected spectral bands at a spatial resolution of 600 μradians (10:1 binning); an extended multi-spectral mapping of the entire Martian surface in 59 selected spectral bands at a spatial resolution of 300 μradians (5:1 binning); a high resolution Target Mode, performing hyperspectral mapping of selected targets of interest at full spatial and spectral resolution; and an atmospheric Emission Phase Function (EPF) mode for atmospheric study and correction at full spectral resolution at a spatial resolution of 300 μradians (5:1 binning). The instrument is gimbaled to allow scanning over +/-60° for the EPF and Target modes. The scanning also permits orbital motion compensation, enabling longer integration times and consequently higher signal-to-noise ratios for selected areas on the Martian surface in Target Mode.

Temporal, Spectral, and Polarization Dependence of the Nonlinear Optical Response of Carbon Disulfide

DTIC Science & Technology

2014-12-18

the refractive index, which for a single beam is given by Δnt n2;el I t Z ∞ −∞ Rt − t 0 I t 0dt 0; (1) where I t is the irradiance, Rt is...excitation irradiance I e independent of propagation distance z and the deflection of the probe within the sample negligible. The probe electric field is Er...the electric field unit vector. i ∂ ∂z 1 v ∂ ∂t E k0E 2n2;el I et Z ∞ −∞ Rt − t 0 I et 0dt 0 0; (9) where k0 ω∕c and v is the

Short rest interval lengths between sets optimally enhance body composition and performance with 8 weeks of strength resistance training in older men.

PubMed

Villanueva, Matthew G; Lane, Christianne Joy; Schroeder, E Todd

2015-02-01

To determine if 8 weeks of periodized strength resistance training (RT) utilizing relatively short rest interval lengths (RI) in between sets (SS) would induce greater improvements in body composition and muscular performance, compared to the same RT program utilizing extended RI (SL). 22 male volunteers (SS: n = 11, 65.6 ± 3.4 years; SL: n = 11, 70.3 ± 4.9 years) were assigned to one of two strength RT groups, following 4 weeks of periodized hypertrophic RT (PHRT): strength RT with 60-s RI (SS) or strength RT with 4-min RI (SL). Prior to randomization, all 22 study participants trained 3 days/week, for 4 weeks, targeting hypertrophy; from week 4 to week 12, SS and SL followed the same periodized strength RT program for 8 weeks, with RI the only difference in their RT prescription. Following PHRT, all study participants experienced increases in lean body mass (LBM) (p < 0.01), upper and lower body strength (p < 0.001), and dynamic power (p < 0.001), as well as decreases in percentage body fat (p < 0.05). Across the 8-week strength RT phase, SS experienced significantly greater increases in LBM (p = 0.001), flat machine bench press 1-RM (p < 0.001), bilateral leg press 1-RM (p < 0.001), narrow/neutral grip lat pulldown (p < 0.01), and Margaria stair-climbing power (p < 0.001), compared to SL. This study suggests 8 weeks of periodized high-intensity strength RT with shortened RI induces significantly greater enhancements in body composition, muscular performance, and functional performance, compared to the same RT prescription with extended RI, in older men. Applied professionals may optimize certain RT-induced adaptations, by incorporating shortened RI.

Utilization of Radiation Therapy in Norway After the Implementation of The National Cancer Plan—A National, Population-Based Study

DOE Office of Scientific and Technical Information (OSTI.GOV)

Åsli, Linn M., E-mail: linn.merete.asli@kreftregisteret.no; Kvaløy, Stein O.; Jetne, Vidar

2014-11-01

Purpose: To estimate actual utilization rates of radiation therapy (RT) in Norway, describe time trends (1997-2010), and compare these estimates with corresponding optimal RT rates. Methods and Materials: Data from the population-based Cancer Registry of Norway was used to identify all patients diagnosed with cancer and/or treated by RT for cancer in 1997-2010. Radiation therapy utilization rates (RURs) were calculated as (1) the proportion of incident cancer cases who received RT at least once within 1 year of diagnosis (RUR{sub 1Y}); and (2) the proportion who received RT within 5 years of diagnosis (RUR{sub 5Y}). The number of RT treatment courses per incidentmore » cancer case (TCI) was also calculated for all cancer sites combined. The actual RURs were compared with corresponding Australian and Canadian epidemiologic- and evidence-based model estimates and criterion-based benchmark estimates of optimal RURs. The TCIs were compared with TCI estimates from the 1997 Norwegian/National Cancer Plan (NCP). Joinpoint regression was used to identify changes in trends and to estimate annual percentage change (APC) in actual RUR{sub 1Y} and actual TCI. Results: The actual RUR{sub 5Y} (all sites) increased significantly to 29% in 2005 but still differed markedly from the Australian epidemiologic- and evidence-based model estimate of 48%. With the exception of RUR{sub 5Y} for breast cancer and RUR{sub 1Y} for lung cancers, all actual RURs were markedly lower than optimal RUR estimates. The actual TCI increased significantly during the study period, reaching 42.5% in 2010, but was still lower than the 54% recommended in the NCP. The trend for RUR{sub 1Y} (all sites) and TCI changed significantly, with the annual percentage change being largest during the first part of the study period. Conclusions: Utilization rates of RT in Norway increased after the NCP was implemented and RT capacity was increased, but they still seem to be lower than optimal levels.« less

VizieR Online Data Catalog: LAMOST-Kepler MKCLASS spectral classification (Gray+, 2016)

NASA Astrophysics Data System (ADS)

Gray, R. O.; Corbally, C. J.; De Cat, P.; Fu, J. N.; Ren, A. B.; Shi, J. R.; Luo, A. L.; Zhang, H. T.; Wu, Y.; Cao, Z.; Li, G.; Zhang, Y.; Hou, Y.; Wang, Y.

2016-07-01

The data for the LAMOST-Kepler project are supplied by the Large Sky Area Multi Object Fiber Spectroscopic Telescope (LAMOST, also known as the Guo Shou Jing Telescope). This unique astronomical instrument is located at the Xinglong observatory in China, and combines a large aperture (4 m) telescope with a 5° circular field of view (Wang et al. 1996ApOpt..35.5155W). Our role in this project is to supply accurate two-dimensional spectral types for the observed targets. The large number of spectra obtained for this project (101086) makes traditional visual classification techniques impractical, so we have utilized the MKCLASS code to perform these classifications. The MKCLASS code (Gray & Corbally 2014AJ....147...80G, v1.07 http://www.appstate.edu/~grayro/mkclass/), an expert system designed to classify blue-violet spectra on the MK Classification system, was employed to produce the spectral classifications reported in this paper. MKCLASS was designed to reproduce the steps skilled human classifiers employ in the classification process. (2 data files).

The multi-spectral line-polarization MSE system on Alcator C-Mod

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mumgaard, R. T., E-mail: mumgaard@psfc.mit.edu; Khoury, M.; Scott, S. D.

A multi-spectral line-polarization motional Stark effect (MSE-MSLP) diagnostic has been developed for the Alcator C-Mod tokamak wherein the Stokes vector is measured in multiple wavelength bands simultaneously on the same sightline to enable better polarized background subtraction. A ten-sightline, four wavelength MSE-MSLP detector system was designed, constructed, and qualified. This system consists of a high-throughput polychromator for each sightline designed to provide large étendue and precise spectral filtering in a cost-effective manner. Each polychromator utilizes four narrow bandpass interference filters and four custom large diameter avalanche photodiode detectors. Two filters collect light to the red and blue of the MSEmore » emission spectrum while the remaining two filters collect the beam pi and sigma emission generated at the same viewing volume. The filter wavelengths are temperature tuned using custom ovens in an automated manner. All system functions are remote controllable and the system can be easily retrofitted to existing single-wavelength line-polarization MSE systems.« less

The multi-spectral line-polarization MSE system on Alcator C-Mod

DOE PAGES

Mumgaard, R. T.; Scott, S. D.; Khoury, M.

2016-08-17

A multi-spectral line-polarization motional Stark effect (MSE-MSLP) diagnostic has been developed for the Alcator C-Mod tokamak wherein the Stokes vector is measured in multiple wavelength bands simultaneously on the same sightline to enable better polarized background subtraction. A ten-sightline, four wavelength MSE-MSLP detector system was designed, constructed, and qualified. This system consists of a high-throughput polychromator for each sightline designed to provide large étendue and precise spectral filtering in a cost-effective manner. Each polychromator utilizes four narrow bandpass interference filters and four custom large diameter avalanche photodiode detectors. Two filters collect light to the red and blue of the MSEmore » emission spectrum while the remaining two filters collect the beam pi and sigma emission generated at the same viewing volume. The filter wavelengths are temperature tuned using custom ovens in an automated manner. Furthermore, all system functions are remote controllable and the system can be easily retrofitted to existing single-wavelength line-polarization MSE systems.« less

The ViewRay system: magnetic resonance-guided and controlled radiotherapy.

PubMed

Mutic, Sasa; Dempsey, James F

2014-07-01

A description of the first commercially available magnetic resonance imaging (MRI)-guided radiation therapy (RT) system is provided. The system consists of a split 0.35-T MR scanner straddling 3 (60)Co heads mounted on a ring gantry, each head equipped with independent doubly focused multileaf collimators. The MR and RT systems share a common isocenter, enabling simultaneous and continuous MRI during RT delivery. An on-couch adaptive RT treatment-planning system and integrated MRI-guided RT control system allow for rapid adaptive planning and beam delivery control based on the visualization of soft tissues. Treatment of patients with this system commenced at Washington University in January 2014. Copyright © 2014 Elsevier Inc. All rights reserved.

Radiation therapy in the last month of life.

PubMed

Patel, Anand; Dunmore-Griffith, Jacquelyn; Lutz, Stephen; Johnstone, Peter A S

2014-05-01

We sought to survey a large, multi-center patient sample to better characterize/quantify RT utilization at the end of life. Few objective data exist for radiation therapy (RT) delivery at end of life (EOL). Data were retrieved for all patients receiving RT in calendar year 2010 in the Department of Radiation Oncology at Indiana University (IU) and Howard University (HU) hospitals. Specific attention was made of the group of patients receiving RT in the last 30 days of life. A total of 852 patients received all or part of their RT during 2010 (HU: 139, IU: 713). At time of analysis in early 2012, 179 patients had died (21%). Fifty-four patients (6.3% of total; 30% of expired patients) died within 30 days of receiving their last treatment. Twenty patients (2.3% of total; 11.2% of expired patients) received RT within their last week of life. For both sites, the median time until death from completion of therapy was 12.5 days (range 2-30 days). Radiation in the last month of life is likely to provide minimal palliation or survival benefit. This, coupled with the financial implications, time investment, and physical costs, suggests that physicians and patients should more strongly consider hospice, and minimize duration of palliative RT courses as far as possible. As with chemotherapy, RT utilization at EOL should be considered for collection as an overuse metric.

The combined use of surgery and radiotherapy to treat patients with epidural cord compression due to metastatic disease: a cost-utility analysis

PubMed Central

Furlan, Julio C.; Chan, Kelvin K.-W.; Sandoval, Guillermo A.; Lam, Kenneth C. K.; Klinger, Christopher A.; Patchell, Roy A.; Laporte, Audrey; Fehlings, Michael G.

2012-01-01

Neoplastic metastatic epidural spinal cord compression is a common complication of cancer that causes pain and progressive neurologic impairment. The previous standard treatment for this condition involved corticosteroids and radiotherapy (RT). Direct decompressive surgery with postoperative radiotherapy (S + RT) is now increasingly being chosen by clinicians to significantly improve patients’ ability to walk and reduce their need for opioid analgesics and corticosteroids. A cost-utility analysis was conducted to compare S + RT with RT alone based on the landmark randomized clinical trial by Patchell et al. (2005). It was performed from the perspective of the Ontario Ministry of Health and Long-Term Care. Ontario-based costs were adjusted to 2010 US dollars. S + RT is more costly but also more effective than corticosteroids and RT alone, with an incremental cost-effectiveness ratio of US$250 307 per quality-adjusted life year (QALY) gained. First order probabilistic sensitivity analysis revealed that the probability of S + RT being cost-effective is 18.11%. The cost-effectiveness acceptability curve showed that there is a 91.11% probability of S + RT being cost-effective over RT alone at a willingness-to-pay of US$1 683 000 per QALY. In practice, the results of our study indicate that, by adopting the S + RT strategy, there would still be a chance of 18.11% of not paying extra at a willingness-to-pay of US$50 000 per QALY. Those results are sensitive to the costs of hospice palliative care. Our results suggest that adopting a standard S + RT approach for patients with MSCC is likely to increase health care costs but would result in improved outcomes. PMID:22505658

Patterns of care and treatment outcomes of patients with Craniopharyngioma in the national cancer database.

PubMed

Rao, Yuan J; Hassanzadeh, Comron; Fischer-Valuck, Benjamin; Chicoine, Michael R; Kim, Albert H; Perkins, Stephanie M; Huang, Jiayi

2017-03-01

To investigate the patterns of care and outcomes in patients with craniopharyngioma in the National Cancer Data Base (NCDB). This study included 697 patients (166 pediatric and 531 adult cases) treated for craniopharyngioma between 2004 and 2012 in the NCDB. Adjuvant radiotherapy (RT) was defined if within 6 months of surgery. Limited surgery (LS) was defined as biopsy or subtotal resection. Proportional-hazards models were used to evaluate associations between covariates and overall survival (OS). A time-dependent analysis of RT was performed to account for early deaths after surgery. Median follow-up was 46 months. Overall, 21% of patients received adjuvant RT. Of patients with known surgical extent (n = 195), 71% had LS. Utilization of adjuvant RT increased from 18% in 2004-2007 to 24% in 2008-2012. Patterns of care regarding adjuvant RT or LS were not significantly different between adult and pediatric patients. Tumor size, low comorbidity, and LS were associated with increased utilization of adjuvant RT. The 5-year OS among patients treated with LS, LS+RT, and gross total resection were 75, 85, and 82% (p = 0.02). On multivariate analysis of the 195 patients with known surgical extent, LS+RT was associated with improved OS compared to LS (HR 0.22, 95% CI 0.05-0.99, p = 0.04), but was not significant when early deaths (<2 months from surgery) were removed to adjust for immortal-time bias. Medical practice regarding surgical approach and adjuvant RT are similar for pediatric and adult craniopharyngiomas. Immortal-time bias may confound assessment of OS for adjuvant RT. Prospective studies comparing adjuvant RT versus observation after LS are warranted.

A DICOM-RT based ePR radiation therapy information system for managing brain tumor patients

NASA Astrophysics Data System (ADS)

Liu, Brent J.; Law, Maria; Huang, H. K.; Zee, C. S.; Chan, Lawrence

2005-04-01

The need for comprehensive clinical image data and relevant information in image-guided Radiation Therapy (RT) is becoming steadily apparent. Multiple standalone systems utilizing the most technological advancements in imaging, therapeutic radiation, and computerized treatment planning systems acquire key data during the RT treatment course of a patient. One example are patients treated for brain tumors of greater sizes and irregular shapes that utilize state-of-the-art RT technology to deliver pinpoint accurate radiation doses. One such system, the Cyberknife, is a radiation treatment system that utilizes image-guided information to control a multi-jointed, six degrees of freedom, robotic arm to deliver precise and required radiation dose to the tumor site of a cancer patient. The image-guided system is capable of tracking the lesion orientations with respect to the patient"s position throughout the treatment process. This is done by correlating live radiographic images with pre-operative, CT and MR imaging information to determine relative patient and tumor position repeatedly over the course of the treatment. The disparate and complex data generated by the Cyberknife system along with related data is scattered throughout the RT department compromising an efficient clinical workflow since the data crucial for a clinical decision may be time-consuming to retrieve, temporarily missing, or even lost. To address these shortcomings, the ACR-NEMA Standards Committee extended its DICOM (Digital Imaging & Communications in Medicine) Standard from Radiology to RT by ratifying seven DICOM RT objects starting in 1997. However, they are rarely used by the RT community in daily clinical operations. In the past, the research focus of an RT department has primarily been developing new protocols and devices to improve treatment process and outcomes of cancer patients with minimal effort dedicated to integration of imaging and information systems. Our research, tightly-coupling radiology and RT information systems, represents a new frontier for medical informatics research that has never been previously considered. By combining our past experience in medical imaging informatics, DICOM-RT expertise, and system integration, we propose to test our hypothesis using a brain tumor case model that a DICOM-RT electronic patient record (ePR) system can improve clinical workflow efficiency for treatment and management of patients. This RT ePR system integrated with clinical images and RT data can impact the RT department in a similar fashion as PACS has already successfully done for Radiology. As a first step, the specific treatment case of patients with brain tumors specifically patients treated with the Cyberknife system will be the initial proof of concept for the research design, implementation, evaluation, and clinical relevance.

Sun-view angle effects on reflectance factors of corn canopies

NASA Technical Reports Server (NTRS)

Ranson, K. J.; Daughtry, C. S. T.; Biehl, L. L.; Bauer, M. E.

1985-01-01

The effects of sun and view angles on reflectance factors of corn (Zea mays L.) canopies ranging from the six leaf stage to harvest maturity were studied on the Purdue University Agronomy Farm by a multiband radiometer. The two methods of acquiring spectral data, the truck system and the tower systrem, are described. The analysis of the spectral data is presented in three parts: solar angle effects on reflectance factors viewed at nadir; solar angle effects on reflectance factors viewed at a fixed sun angle; and both sun and view angles effect on reflectance factors. The analysis revealed that for nadir-viewed reflectance factors there is a strong solar angle dependence in all spectral bands for canopies with low leaf area index. Reflectance factors observed from the sun angle at different view azimuth angles showed that the position of the sensor relative to the sun is important in determining angular reflectance characteristics. For both sun and view angles, reflectance factors are maximized when the sensor view direction is towards the sun.

5. Detail view of masonry foundations and flue openings for ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

5. Detail view of masonry foundations and flue openings for Jamaican Train. - Hacienda Azucarera El Coto, Sugar Mill Ruins, .5 Mi. SW of Rt. 347 Bridge Over Guanajibo River, San German, San German Municipio, PR

Using local correlation tracking to recover solar spectral information from a slitless spectrograph

NASA Astrophysics Data System (ADS)

Courrier, Hans T.; Kankelborg, Charles C.

2018-01-01

The Multi-Order Solar EUV Spectrograph (MOSES) is a sounding rocket instrument that utilizes a concave spherical diffraction grating to form simultaneous images in the diffraction orders m=0, +1, and -1. MOSES is designed to capture high-resolution cotemporal spectral and spatial information of solar features over a large two-dimensional field of view. Our goal is to estimate the Doppler shift as a function of position for every MOSES exposure. Since the instrument is designed to operate without an entrance slit, this requires disentangling overlapping spectral and spatial information in the m=±1 images. Dispersion in these images leads to a field-dependent displacement that is proportional to Doppler shift. We identify these Doppler shift-induced displacements for the single bright emission line in the instrument passband by comparing images from each spectral order. We demonstrate the use of local correlation tracking as a means to quantify these differences between a pair of cotemporal image orders. The resulting vector displacement field is interpreted as a measurement of the Doppler shift. Since three image orders are available, we generate three Doppler maps from each exposure. These may be compared to produce an error estimate.

Modelling, Design, Growth and Characterization of Strain Balanced Quantum Cascade Lasers (3-11mum), grown by Gas Source Molecular Beam Epitaxy

NASA Astrophysics Data System (ADS)

Bandyopadhyay, Neelanjan

Quantum Cascade Laser (QCL) is a compact room temperature (RT) source of mid-infrared radiation, which can be used for spectroscopic detection of trace amount of chemicals. The mid-infrared spectral range between (3-11 microm), has a dense array of absorption lines of numerous molecules, due to the presence of fundamental vibrational modes. The goal of this thesis can be subdivided into two parts. Firstly, short wavelength QCLs, emitting below 4microm, perform poorly at RT, due to inter-valley Gamma --- L carrier scattering, carrier escape to the continuum, heat removal from the core region at high power density corresponding to short wavelength operation, and large interface scattering due to highly strained materials. Secondly, it is desirable to have a single QCL based source emitting between 6-10microm, which be used to detect multiple molecules having their peak absorptions far apart, inside this spectral range. However, gain bandwidth of a single core QCL is relatively small, so laser emission cannot be tuned over a wide spectral range. This thesis describes the working principle of a QCL based on superlattice transport, rate equations, scattering mechanism, and waveguide design. The choice of the material system for this work and the fundamentals of band structure engineering has been derived. Gas source molecular beam epitaxy - growth optimization and characterization is one of the most important features of this work, especially for short wavelength QCLs, and has been explained in depth. Different strategies for design of active region design of short wavelength QCL and heterogeneous broadband QCL has been explored. The major milestones, of this research was the world's first watt level continuous wave (CW), RT demonstration at 3.76 microm, which was followed by another milestone of the first CW, RT demonstration at 3.39microm and 3.55microm, and finally the elusive result of QCL emitting at CW, RT at a wavelength as short as lambda ~3microm, a record. In the longer wavelength side a novel approach to design of strain balanced QCLs based on the same material composition was demonstrated. Finally a gapless heterogeneous broadband QCL, incorporating multiple QCL cores in a single active region, with record tunability between 6.1-10.2 microm, was demonstrated.

Cortical afferents onto the nucleus Reticularis thalami promote plasticity of low-threshold excitability through GluN2C-NMDARs.

PubMed

Fernandez, Laura M J; Pellegrini, Chiara; Vantomme, Gil; Béard, Elidie; Lüthi, Anita; Astori, Simone

2017-09-25

Thalamus and cortex represent a highly integrated processing unit that elaborates sensory representations. Interposed between cortex and thalamus, the nucleus Reticularis thalami (nRt) receives strong cortical glutamatergic input and mediates top-down inhibitory feedback to thalamus. Despite growing appreciation that the nRt is integral for thalamocortical functions from sleep to attentional wakefulness, we still face considerable gaps in the synaptic bases for cortico-nRt communication and plastic regulation. Here, we examined modulation of nRt excitability by cortical synaptic drive in Ntsr1-Cre x ChR2 tg/+ mice expressing Channelrhodopsin2 in layer 6 corticothalamic cells. We found that cortico-nRt synapses express a major portion of NMDA receptors containing the GluN2C subunit (GluN2C-NMDARs). Upon repetitive photoactivation (10 Hz trains), GluN2C-NMDARs induced a long-term increase in nRt excitability involving a potentiated recruitment of T-type Ca 2+ channels. In anaesthetized mice, analogous stimulation of cortical afferents onto nRt produced long-lasting changes in cortical local field potentials (LFPs), with delta oscillations being augmented at the expense of slow oscillations. This shift in LFP spectral composition was sensitive to NMDAR blockade in the nRt. Our data reveal a novel mechanism involving plastic modification of synaptically recruited T-type Ca 2+ channels and nRt bursting and indicate a critical role for GluN2C-NMDARs in thalamocortical rhythmogenesis.

Radiometric stability of the Multi-angle Imaging SpectroRadiometer (MISR) following 15 years on-orbit

NASA Astrophysics Data System (ADS)

Bruegge, Carol J.; Val, Sebastian; Diner, David J.; Jovanovic, Veljko; Gray, Ellyn; Di Girolamo, Larry; Zhao, Guangyu

2014-09-01

The Multi-angle Imaging SpectroRadiometer (MISR) has successfully operated on the EOS/ Terra spacecraft since 1999. It consists of nine cameras pointing from nadir to 70.5° view angle with four spectral channels per camera. Specifications call for a radiometric uncertainty of 3% absolute and 1% relative to the other cameras. To accomplish this, MISR utilizes an on-board calibrator (OBC) to measure camera response changes. Once every two months the two Spectralon panels are deployed to direct solar-light into the cameras. Six photodiode sets measure the illumination level that are compared to MISR raw digital numbers, thus determining the radiometric gain coefficients used in Level 1 data processing. Although panel stability is not required, there has been little detectable change in panel reflectance, attributed to careful preflight handling techniques. The cameras themselves have degraded in radiometric response by 10% since launch, but calibration updates using the detector-based scheme has compensated for these drifts and allowed the radiance products to meet accuracy requirements. Validation using Sahara desert observations show that there has been a drift of ~1% in the reported nadir-view radiance over a decade, common to all spectral bands.

8. Detail view of steam dome attached to top of ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

8. Detail view of steam dome attached to top of Lancashire double flue boiler. - Hacienda Azucarera El Coto, Sugar Mill Ruins, .5 Mi. SW of Rt. 347 Bridge Over Guanajibo River, San German, San German Municipio, PR

[Analysis of software for identifying spectral line of laser-induced breakdown spectroscopy based on LabVIEW].

PubMed

Hu, Zhi-yu; Zhang, Lei; Ma, Wei-guang; Yan, Xiao-juan; Li, Zhi-xin; Zhang, Yong-zhi; Wang, Le; Dong, Lei; Yin, Wang-bao; Jia, Suo-tang

2012-03-01

Self-designed identifying software for LIBS spectral line was introduced. Being integrated with LabVIEW, the soft ware can smooth spectral lines and pick peaks. The second difference and threshold methods were employed. Characteristic spectrum of several elements matches the NIST database, and realizes automatic spectral line identification and qualitative analysis of the basic composition of sample. This software can analyze spectrum handily and rapidly. It will be a useful tool for LIBS.

Updating representations of learned scenes.

PubMed

Finlay, Cory A; Motes, Michael A; Kozhevnikov, Maria

2007-05-01

Two experiments were designed to compare scene recognition reaction time (RT) and accuracy patterns following observer versus scene movement. In Experiment 1, participants memorized a scene from a single perspective. Then, either the scene was rotated or the participants moved (0 degrees -360 degrees in 36 degrees increments) around the scene, and participants judged whether the objects' positions had changed. Regardless of whether the scene was rotated or the observer moved, RT increased with greater angular distance between judged and encoded views. In Experiment 2, we varied the delay (0, 6, or 12 s) between scene encoding and locomotion. Regardless of the delay, however, accuracy decreased and RT increased with angular distance. Thus, our data show that observer movement does not necessarily update representations of spatial layouts and raise questions about the effects of duration limitations and encoding points of view on the automatic spatial updating of representations of scenes.

Implementation of a fast 16-Bit dynamic clamp using LabVIEW-RT.

PubMed

Kullmann, Paul H M; Wheeler, Diek W; Beacom, Joshua; Horn, John P

2004-01-01

The dynamic-clamp method provides a powerful electrophysiological tool for creating virtual ionic conductances in living cells and studying their influence on membrane potential. Here we describe G-clamp, a new way to implement a dynamic clamp using the real-time version of the Lab-VIEW programming environment together with a Windows host, an embedded microprocessor that runs a real-time operating system and a multifunction data-acquisition board. The software includes descriptions of a fast voltage-dependent sodium conductance, delayed rectifier, M-type and A-type potassium conductances, and a leak conductance. The system can also read synaptic conductance waveforms from preassembled data files. These virtual conductances can be reliably implemented at speeds < or =43 kHz while simultaneously saving two channels of data with 16-bit precision. G-clamp also includes utilities for measuring current-voltage relations, synaptic strength, and synaptic gain. Taking an approach built on a commercially available software/hardware platform has resulted in a system that is easy to assemble and upgrade. In addition, the graphical programming structure of LabVIEW should make it relatively easy for others to adapt G-clamp for new experimental applications.

Evaluating the effect of remote sensing image spatial resolution on soil exchangeable potassium prediction models in smallholder farm settings.

PubMed

Xu, Yiming; Smith, Scot E; Grunwald, Sabine; Abd-Elrahman, Amr; Wani, Suhas P

2017-09-15

Major end users of Digital Soil Mapping (DSM) such as policy makers and agricultural extension workers are faced with choosing the appropriate remote sensing data. The objective of this research is to analyze the spatial resolution effects of different remote sensing images on soil prediction models in two smallholder farms in Southern India called Kothapally (Telangana State), and Masuti (Karnataka State), and provide empirical guidelines to choose the appropriate remote sensing images in DSM. Bayesian kriging (BK) was utilized to characterize the spatial pattern of exchangeable potassium (K ex ) in the topsoil (0-15 cm) at different spatial resolutions by incorporating spectral indices from Landsat 8 (30 m), RapidEye (5 m), and WorldView-2/GeoEye-1/Pleiades-1A images (2 m). Some spectral indices such as band reflectances, band ratios, Crust Index and Atmospherically Resistant Vegetation Index from multiple images showed relatively strong correlations with soil K ex in two study areas. The research also suggested that fine spatial resolution WorldView-2/GeoEye-1/Pleiades-1A-based and RapidEye-based soil prediction models would not necessarily have higher prediction performance than coarse spatial resolution Landsat 8-based soil prediction models. The end users of DSM in smallholder farm settings need select the appropriate spectral indices and consider different factors such as the spatial resolution, band width, spectral resolution, temporal frequency, cost, and processing time of different remote sensing images. Overall, remote sensing-based Digital Soil Mapping has potential to be promoted to smallholder farm settings all over the world and help smallholder farmers implement sustainable and field-specific soil nutrient management scheme. Copyright © 2017 Elsevier Ltd. All rights reserved.

IR spectral properties of dust and ice at the Mars south polar cap

NASA Astrophysics Data System (ADS)

Titus, T. N.; Kieffer, H. H.

2001-11-01

Removal of atmospheric dust effects is required to derive surface IR spectral emissivity. Commonly, the atmospheric-surface separation is based on radiative transfer (RT) spectral inversion methods using nadir-pointing observations. This methodology depends on a priori knowledge of the spectral shape of each atmospheric aerosol (e.g. dust or water ice) and a large thermal contrast between the surface and atmosphere. RT methods fail over the polar caps due to low thermal contrast between the atmosphere and the surface. We have used multi-angle Emission Phase Function (EPF) observations to estimate the opacity spectrum of dust over the springtime south polar cap and the underlying surface radiance, and thus, the surface emissivity. We include a few EPFs from Hellas Basin as a basis for comparisons between the spectral shape of polar and non-polar dust. Surface spectral emissivities over the seasonal cap are compared to CO2 models. Our results show that the spectral shape of the polar dust opacity is not constant, but is a two-parameter family that can be characterized by the 9 um and 20 um opacities. The 9 um opacity varies from 0.15 to 0.45 and characterizes the overall atmospheric conditions. The 9 um to 20 um opacity ratio varies from 2.0 to 5.1, suggesting changes in dust size distribution over the polar caps. Derived surface temperatures from the EPFs confirm that the slightly elevated temperatures (relative to CO2 frost temperature) observed in ``cryptic'' regions are a surface effect, not atmospheric. Comparison of broad-band reflectivity and surface emissivities to model spectra suggest the bright regions (e.g. perennial cap, Mountains of Mitchell) have higher albedos due to a thin surface layer of fine-grain CO2 (perhaps either frost or fractured ice) with an underlying layer of either coarse grain or slab CO2 ice.

Racial and ethnic disparities in the use of intravenous recombinant tissue plasminogen activator and outcomes for acute ischemic stroke.

PubMed

Nasr, Deena M; Brinjikji, Waleed; Cloft, Harry J; Rabinstein, Alejandro A

2013-02-01

Racial and ethnic disparities in acute stroke care in the United States have been previously reported. This study investigated possible racial and ethnic disparities in the administration and outcome of recombinant tissue plasminogen activator (rtPA) therapy for acute ischemic stroke in whites, blacks, Hispanics, and Asian/Pacific Islanders. Using the National Inpatient Sample for 2001-2008, we selected patients with a primary diagnosis of acute ischemic stroke who received treatment with rtPA. Patient data were stratified by race (white, black, Hispanic, and Asian/Pacific Islander). We analyzed the association of patient race on rtPA utilization rate, in-hospital morbidity (ie, discharge to long-term facility), intracranial hemorrhage (ICH) rate, and in-hospital mortality. We performed a multivariate logistic regression analysis to determine independent predictors of poor outcomes. White patients had a higher rate of tPA utilization than black and Hispanic patients (2.3% vs 1.8% and 2.0%, respectively; P < .0001 for both groups). There was no difference in the rate of tPA utilization between whites and Asian/Pacific Islanders (2.3% vs 2.2% P = .07). Multivariate analysis of morbidity, mortality, and ICH rates found that Asian/Pacific Islanders had significantly higher rates of mortality (odds ratio, 1.22, 95% confidence interval, 1.03-1.44; P = .02) and ICH (odds ratio, 2.01; 95% confidence interval, 1.91-2.11; P < .0001) compared with whites. rtPA utilization was greater in white and Asian/Pacific Islander patients than in black and Hispanic patients. Asian/Pacific Islander race was associated with increased risk of ICH and mortality after rtPA administration. Copyright © 2013. Published by Elsevier Inc.

Spectral interferences in the determination of rhenium in molybdenum and copper concentrates by inductively coupled plasma optical emission spectrometry (ICP-OES)

NASA Astrophysics Data System (ADS)

Karadjov, Metody; Velitchkova, Nikolaya; Veleva, Olga; Velichkov, Serafim; Markov, Pavel; Daskalova, Nonka

2016-05-01

This paper deals with spectral interferences of complex matrix containing Mo, Al, Ti, Fe, Mg, Ca and Cu in the determination of rhenium in molybdenum and copper concentrates by inductively coupled plasma optical emission spectrometry (ICP-OES). By radial viewing 40.68 MHz ICP equipped with a high resolution spectrometer (spectral bandwidth = 5 pm) the hyperfine structure (HFS) of the most prominent lines of rhenium (Re II 197.248 nm, Re II 221.426 nm and Re II 227.525 nm) was registered. The HFS components under high resolution conditions were used as separate prominent line in order to circumvent spectral interferences. The Q-concept was applied for quantification of spectral interferences. The quantitative databases for the type and the magnitude of the spectral interferences in the presence of above mentioned matrix constituents were obtained by using a radial viewing 40.68 MHz ICP with high resolution and an axial viewing 27.12 MHz ICP with middle resolution. The data for the both ICP-OES systems were collected chiefly with a view to spectrochemical analysis for comparing the magnitude of line and wing (background) spectral interference and the true detection limits with spectroscopic apparatus with different spectral resolution. The sample pretreatment methods by sintering with magnesium oxide and oxidizing agents as well as a microwave acid digestion were applied. The feasibility, accuracy and precision of the analytical results were experimentally demonstrated by certified reference materials.

Lineshape spectroscopy with a very high resolution, very high signal-to-noise crystal spectrometer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Beiersdorfer, P.; Magee, E. W.; Brown, G. V.

2016-06-15

We have developed a high-resolution x-ray spectrometer for measuring the shapes of spectral lines produced from laser-irradiated targets on the Orion laser facility. The instrument utilizes a spherically bent crystal geometry to spatially focus and spectrally analyze photons from foil or microdot targets. The high photon collection efficiency resulting from its imaging properties allows the instrument to be mounted outside the Orion chamber, where it is far less sensitive to particles, hard x-rays, or electromagnetic pulses than instruments housed close to the target chamber center in ten-inch manipulators. Moreover, Bragg angles above 50° are possible, which provide greatly improved spectralmore » resolution compared to radially viewing, near grazing-incidence crystal spectrometers. These properties make the new instrument an ideal lineshape diagnostic for determining plasma temperature and density. We describe its calibration on the Livermore electron beam ion trap facility and present spectral data of the K-shell emission from highly charged sulfur produced by long-pulse as well as short-pulse beams on the Orion laser in the United Kingdom.« less

Individual Differences in Infant Oculomotor Behavior During the Viewing of Complex Naturalistic Scenes.

PubMed

Wass, Sam V; Smith, Tim J

2014-07-01

Little research hitherto has examined how individual differences in attention, as assessed using standard experimental paradigms, relate to individual differences in how attention is spontaneously allocated in more naturalistic contexts. Here, we analyzed the time intervals between refoveating eye movements (fixation durations) while typically developing 11-month-old infants viewed a 90-min battery ranging from complex dynamic to noncomplex static materials. The same infants also completed experimental assessments of cognitive control, psychomotor reaction times (RT), processing speed (indexed via peak look during habituation), and arousal (indexed via tonic pupil size). High test-retest reliability was found for fixation duration, across testing sessions and across types of viewing material. Increased cognitive control and increased arousal were associated with reduced variability in fixation duration. For fixations to dynamic stimuli, in which a large proportion of saccades may be exogenously cued, we found that psychomotor RT measures were most predictive of mean fixation duration; for fixations to static stimuli, in contrast, in which there is less exogenous attentional capture, we found that psychomotor RT did not predict performance, but that measures of cognitive control and arousal did. The implications of these findings for understanding the development of attentional control in naturalistic settings are discussed.

Changes in Treatment Patterns and Overall Survival in Patients With Early-Stage Non-Small Cell Lung Cancer in the United States After the Incorporation of Stereotactic Ablative Radiation Therapy: A Population-based Analysis.

PubMed

Haque, Waqar; Szeja, Sean; Tann, Anne; Kalra, Sarathi; Teh, Bin S

2018-03-01

Technologic developments have made radiation therapy (RT) more effective and have introduced new treatment options, such as stereotactic ablative radiation therapy (SABR). This study sought to determine changes in practice patterns for treatment of stage IA non-small cell lung cancer (NSCLC) after the introduction of SABR into the United States. This population-based study also examined changes in survival during this time period for all patients and specifically for patients treated with RT, surgery, or observation. We included patients in the Surveillance, Epidemiology, and End Results database diagnosed with stage IA NSCLC diagnosed between 2004 and 2012. Changes in treatment patterns were assessed. Outcomes were compared across 2 time periods: 2004 to 2008 (pre-SABR) and 2009 to 2012 (post-SABR). Kaplan-Meier and Cox regression were performed to compare overall survival (OS) for patients treated with surgery, RT, or observation. A total of 32,249 patients met the specified criteria. Comparing patients diagnosed in 2004 to those diagnosed in 2012, RT use increased from 13% to 29% (P<0.001), surgery use decreased from 76% to 61% (P<0.001), and patients observed decreased from 11% to 10% (P=0.3). There was no significant OS improvement in all patients or those patients who were observed; there were significant improvements in OS for patients treated with RT (hazard ratio=0.768; 95% confidence interval, 0.711-0.829) and those patients treated with surgery (hazard ratio=0.9; 95% confidence interval, 0.855-0.962). There has been an increase in RT utilization and decrease in surgical utilization after the incorporation of SABR by radiation oncologists within the United States. In addition, there has been an improvement in OS for patients treated with definitive RT for early-stage NSCLC between 2004 and 2012 that may be associated with increased utilization of SABR.

Surface composition of Mars: A Viking multispectral view

NASA Technical Reports Server (NTRS)

Adams, John B.; Smith, Milton O.; Arvidson, Raymond E.; Dale-Bannister, Mary; Guinness, Edward A.; Singer, Robert; Adams, John B.

1987-01-01

A new method of analyzing multispectral images takes advantage of the spectral variation from pixel to pixel that is typical for natural planetary surfaces, and treats all pixels as potential mixtures of spectrally distinct materials. For Viking Lander images, mixtures of only three spectral end members (rock, soil, and shade) are sufficient to explain the observed spectral variation to the level of instrumental noise. It was concluded that a large portion of the Martian surface consists of only two spectrally distinct materials, basalt and palgonitic soil. It is emphasized, however, that as viewed through the three broad bandpasses of Viking Orbiter, other materials cannot be distinguished from the mixtures.

Quantum chemical studies on structural, vibrational, nonlinear optical properties and chemical reactivity of indigo carmine dye

NASA Astrophysics Data System (ADS)

El-Mansy, M. A. M.

2017-08-01

Structural and vibrational spectroscopic studies were performed on indigo carmine (IC) isomers using FT-IR spectral analysis along with DFT/B3LYP method utilizing Gaussian 09 software. GaussView 5 program has been employed to perform a detailed interpretation of vibrational spectra. Simulation of infrared spectra has led to an excellent overall agreement with the observed spectral patterns. Mulliken population analyses on atomic charges, MEP, HOMO-LUMO, NLO, first order hyperpolarizability and thermodynamic properties have been examined by (DFT/B3LYP) method with the SDD basis set level. Density of state spectra (DOS) were calculated using GaussSum 3 at the same level of theory. Molecular modeling approved that DOS Spectra are the most significant tools for differentiating between two IC isomers so far. Moreover, The IC isomers (cis-isomer) have shown an extended applicability for manufacturing both NLO and photovoltaic devices such as solar cells.

Absolute determination of the cross sections of ozone in the wavelength region 339-355 nm at temperatures 220-293 K

NASA Astrophysics Data System (ADS)

Cacciani, Marco; di Sarra, Alcide; Fiocco, Giorgio; Amoruso, Antonella

1989-06-01

Absolute measurements of the ozone absorption coefficient in the Huggins bands at different temperatures have been carried out. Ozone is produced by an electrical discharge and stored cryogenically; differential absorption measurements are subsequently obtained in a slowly evolving mixture of ozone and molecular oxygen. High resolution (to 0.012 nm) measurements cover a spectral range (339-355 nm) where the ozone absorption shows a strong dependence on temperature. Results at 293 and 220 K are reported; they are particularly interesting in view of the utilization of this spectral region as a low-absorption reference channel for the observation of atmospheric ozone profiles by active probing techniques. Coherent radiation at two wavelengths, around 355 and 353 nm, respectively, can be obtained as third harmonic of the fundamental output of an Nd:YAG laser and by H2 Raman shifting of an XeCl excimer laser output.

INTRAVITREAL VERSUS SUBRETINAL ADMINISTRATION OF RECOMBINANT TISSUE PLASMINOGEN ACTIVATOR COMBINED WITH GAS FOR ACUTE SUBMACULAR HEMORRHAGES DUE TO AGE-RELATED MACULAR DEGENERATION: An Exploratory Prospective Study.

PubMed

de Jong, Jan H; van Zeeburg, Elsbeth J T; Cereda, Matteo G; van Velthoven, Mirjam E J; Faridpooya, Koorosh; Vermeer, Koenraad A; van Meurs, Jan C

2016-05-01

Current management of submacular hemorrhage (SMH) favors vitrectomy and gas with subretinal administration of recombinant tissue plasminogen activator (rtPA) over mere intravitreal rtPA injections and gas. In this study, we aimed to compare the effectiveness of both treatment modalities to displace submacular blood. Twenty-four patients with SMH secondary to age-related macular degeneration were included. The SMH had to exist ≤14 days at time of surgery and SMH thickness had to be between 250 μm and 1,250 μm. Patients were randomized to either intravitreal injections of rtPA, perfluoropropane (C3F8) gas, and bevacizumab (n = 12) or vitrectomy with subretinal rtPA administration, intravitreal C3F8 gas, and bevacizumab (n = 12). The SMH volume change was measured on spectral domain optical coherence tomography postoperatively within a 2.5-mm cylinder centered at the fovea. Median relative volume reduction of subretinal blood at 6 weeks postoperatively was 97% (95% confidence interval: 91-99%) in the intravitreal rtPA group and 100% (95-100%) in the subretinal rtPA group and did not differ significantly between groups (P = 0.56). Both treatment modalities effectively displaced SMH in this exploratory clinical trial. To more definitely study the noninferiority of intravitreal rtPA with gas to subretinal rtPA, vitrectomy with gas, a larger clinical trial would be necessary.

Untersuchung der Mira-Sterne RT Boo, TV Peg und VX Aur

NASA Astrophysics Data System (ADS)

Raetz, Kerstin; Berthold, Thomas

2015-02-01

The light-change of the Mira stars RT Boo, TV Peg and VX Aur was analyzed on three ways for a long time. In the first period I estimated the brightness of the variables on sky monitoring photo plates (red spectral range) from Sonneberg Observatory with Argelander¥s Method, in the last years I measured scanned photo plates with a photometry program and in addition I used visual observations from A.A.V.S.O. for the analysis. The behavior of the periods of the tree stars from 1965 to 2013 is described here.

Manufacture, alignment and measurement for a reflective triplet optics in imaging spectrometer

NASA Astrophysics Data System (ADS)

Yuan, Liyin; He, Zhiping; Wang, Yueming; Lv, Gang

2016-09-01

Reflective triplet (RT) optics is an optical form with decenters and tilts of all the three mirrors. It can be used in spectrometer as collimator and reimager to get fine optical and spectral performances. To alleviate thermal and assembly stress deformation, opto-mechanical integrated design suggests that as with all the machine elements and the mainframe, the mirrors substrates are aluminum. All the mirrors are manufactured by single-point diamond turning technology and measured by interferometer or profilometer. Because of retro-reflection by grating or prism and reimaging away from the object field, solo three mirrors optical path of RT has some aberrations. So its alignment and measurement needs an aberration corrected measuring optical system with auxiliary plane and sphere mirrors and in which the RT optics used in four pass. Manufacture, alignment and measurement for a RT optics used in long wave infrared grating spectrometer is discussed here. We realized the manufacture, alignment and test for the RT optics of a longwave infrared spectromter by CMM and interferometer. Wavefront error test by interferometer and surface profiles measured by profilometer indicate that performances of the manufactured mirrors exceed the requirements. Interferogram of the assembled RT optics shows that wavefront error rms is less than 0.0493λ@10.6μm vs design result 0.0207λ.

Noise in the passenger cars of high-speed trains.

PubMed

Hong, Joo Young; Cha, Yongwon; Jeon, Jin Yong

2015-12-01

The aim of this study is to investigate the effects of both room acoustic conditions and spectral characteristics of noises on acoustic discomfort in a high-speed train's passenger car. Measurement of interior noises in a high-speed train was performed when the train was operating at speeds of 100 km/h and 300 km/h. Acoustic discomfort caused by interior noises was evaluated by paired comparison methods based on the variation of reverberation time (RT) in a passenger car and the spectral differences in interior noises. The effect of RT on acoustic discomfort was not significant, whereas acoustic discomfort significantly varied depending on spectral differences in noise. Acoustic discomfort increased with increment of the sound pressure level (SPL) ratio at high frequencies, and variation in high-frequency noise components were described using sharpness. Just noticeable differences of SPL with low- and high-frequency components were determined to be 3.7 and 2.9 dB, respectively. This indicates that subjects were more sensitive to differences in SPLs at the high-frequency range than differences at the low-frequency range. These results support that, for interior noises, reduction in SPLs at high frequencies would significantly contribute to improved acoustic quality in passenger cars of high-speed trains.

Ice clouds optical properties in the Far Infrared from the ECOWAR-COBRA Experiment

NASA Astrophysics Data System (ADS)

Rizzi, Rolando; Tosi, Ennio

ECOWAR-COBRA (Earth COoling by WAter vapouR emission -Campagna di Osservazioni della Banda Rotazionale del vapor d'Acqua) field campaign took place in Italy from 3 to 17 March 2007 with the main goal of studying the scarcely sensed atmospheric emission occurring beyond 17 microns. Instrumentation involved in the campaign included two different Fourier Transforms Spectrometers (FTS) : REFIR-PAD (at Testa Grigia Station, 3500 m a.s.l.) and FTIR-ABB (at Cervinia Station, 1990 m a.s.l.). In this work cloudy sky data have been ana-lyzed. A cloud properties retrieval methodology (RT-RET), based on high spectral resolution measurements in the atmospheric window (800-1000 cm-1), is applied to both FTS sensors. Cloud properties determined from the infrared retrievals are compared with those obtained from Raman lidar taken by the BASIL Lidar system that was operating at Cervinia station. Cloud microphysical and optical properties retrieved by RT-RET are used to perform forward simulations over the entire FTSs measurements spectral interval. Results are compared to FTS data to test the ability of single scattering ice crystals models to reproduce cloudy sky radiances in the Far Infra-Red (FIR) part of the spectrum. New methods to retrieve cloud optical and microphysical properties exploiting high spectral resolution FIR measurements are also investigated.

Development of a 3D remote dosimetry protocol compatible with MRgIMRT.

PubMed

Mein, Stewart; Rankine, Leith; Adamovics, John; Li, Harold; Oldham, Mark

2017-11-01

To develop a novel remote 3D dosimetry protocol to verify Magnetic Resonance-guided Radiation Therapy (MRgRT) treatments. The protocol was applied to investigate the accuracy of TG-119 IMRT irradiations delivered by the MRIdian ® system (ViewRay ® , Oakwood Village, OH, USA) allowing for a 48-hour delay between irradiation at a field institution and subsequent readout at a base institution. The 3D dosimetry protocol utilizes a novel formulation of PRESAGE ® radiochromic dosimeters developed for high postirradiation stability and compatibility with optical-CT readout. Optical-CT readout was performed with an in-house system utilizing telecentric lenses affording high-resolution scanning. The protocol was developed from preparatory experiments to characterize PRESAGE ® response in relevant conditions. First, linearity and sensitivity of PRESAGE ® dose-response in the presence of a magnetic field was evaluated in a small volume study (4 ml cuvettes) conducted under MRgRT conditions and irradiated with doses 0-15 Gy. Temporal and spatial stability of the dose-response were investigated in large volume studies utilizing large field-of-view (FOV) 2 kg cylindrical PRESAGE ® dosimeters. Dosimeters were imaged at t = 1 hr and t = 48 hrs enabling the development of correction terms to model any observed spatial and temporal changes postirradiation. Polynomial correction factors for temporal and spatial changes in PRESAGE ® dosimeters (C T and C R respectively) were obtained by numerical fitting to time-point data acquired in six irradiated dosimeters. A remote dosimetry protocol was developed where PRESAGE ® change in optical-density (ΔOD) readings at time t = X (the irradiation to return shipment time interval) were corrected back to a convenient standard time t = 1 hr using the C T and C R corrections. This refined protocol was then applied to TG-119 (American Association of Physicists in Medicine, Task Group 119) plan deliveries on the MRIdian ® system to evaluate the accuracy of MRgRT in these conditions. In the small volume study, in the presence of a 0.35 T magnetic field, PRESAGE ® was observed to respond linearly (R 2  = 0.9996) to Co-60 irradiation at t = 48 hrs postirradiation, within the dose ranges of 0 to 15 Gy, with a sensitivity of 0.0305(±0.003) ΔOD cm -1  Gy -1 . In the large volume studies, at t = 1 hr postirradiation, consistent linear response was observed, with average sensitivity of 0.0930 ± 0.002 ΔOD cm -1  Gy -1 . However, dosimeters gradually darkened with time (OD< 5% per day). A small radial dependence to the dosimeter sensitivity was measured (< 3% of maximum dose), which is attributed to a spherically symmetric dosimeter artifact arising from exothermic heating legacy in the PRESAGE ® polyurethane substrate during curing. When applied to the TG-119 IMRT irradiations, the remote dosimetry protocol (including correction terms) yielded excellent line-profile and 3D gamma agreement for 3%/3 mm, 10% threshold (mean passing rate = 96.6% ± 4.0%). A novel 3D remote dosimetry protocol is introduced for validating off-site dosimetrically complex radiotherapy systems, including MRgRT. The protocol involves correcting for temporal and spatially dependent changes in PRESAGE ® radiochromic dosimeters readout by optical-CT. Application of the protocol to TG-119 irradiations enabled verification of MRgRT dose distributions with high resolution. © 2017 American Association of Physicists in Medicine.

Characterization of a compact 6-band multifunctional camera based on patterned spectral filters in the focal plane

NASA Astrophysics Data System (ADS)

Torkildsen, H. E.; Hovland, H.; Opsahl, T.; Haavardsholm, T. V.; Nicolas, S.; Skauli, T.

2014-06-01

In some applications of multi- or hyperspectral imaging, it is important to have a compact sensor. The most compact spectral imaging sensors are based on spectral filtering in the focal plane. For hyperspectral imaging, it has been proposed to use a "linearly variable" bandpass filter in the focal plane, combined with scanning of the field of view. As the image of a given object in the scene moves across the field of view, it is observed through parts of the filter with varying center wavelength, and a complete spectrum can be assembled. However if the radiance received from the object varies with viewing angle, or with time, then the reconstructed spectrum will be distorted. We describe a camera design where this hyperspectral functionality is traded for multispectral imaging with better spectral integrity. Spectral distortion is minimized by using a patterned filter with 6 bands arranged close together, so that a scene object is seen by each spectral band in rapid succession and with minimal change in viewing angle. The set of 6 bands is repeated 4 times so that the spectral data can be checked for internal consistency. Still the total extent of the filter in the scan direction is small. Therefore the remainder of the image sensor can be used for conventional imaging with potential for using motion tracking and 3D reconstruction to support the spectral imaging function. We show detailed characterization of the point spread function of the camera, demonstrating the importance of such characterization as a basis for image reconstruction. A simplified image reconstruction based on feature-based image coregistration is shown to yield reasonable results. Elimination of spectral artifacts due to scene motion is demonstrated.

SPoRT Participation in the GOES-R and JPSS Proving Grounds

NASA Technical Reports Server (NTRS)

Jedlovec, Gary; Fuell, Kevin; Smith, Matthew

2013-01-01

For the last several years, the NASA Short-term Prediction Research and Transition (SPoRT) project at has been working with the various algorithm working groups and science teams to demonstrate the utility of future operational sensors for GOES-R and the suite of instruments for the JPSS observing platforms. For GOES-R, imagery and products have been developed from polar-orbiting sensors such as MODIS and geostationary observations from SEVIRI, simulated imagery, enhanced products derived from existing GOES satellites, and data from ground-based observing systems to generate pseudo or proxy products for the ABI and GLM instruments. The suite of products include GOES-POES basic and RGB hybrid imagery, total lightning flash products, quantitative precipitation estimates, and convective initiation products. SPoRT is using imagery and products from VIIRS, CrIS, ATMS, and OMPS to show the utility of data and products from their operational counterparts on JPSS. The products include VIIRS imagery in swath form, the GOES-POES hybrid, a suite of RGB products including the air mass RGB using water vapor and ozone channels from CrIS, and several DNB products. Over a dozen SPoRT collaborative WFOs and several National Centers are involved in an intensive evaluation of the operational utility of these products.

Real-time data acquisition and control system for the measurement of motor and neural data

PubMed Central

Bryant, Christopher L.; Gandhi, Neeraj J.

2013-01-01

This paper outlines a powerful, yet flexible real-time data acquisition and control system for use in the triggering and measurement of both analog and digital events. Built using the LabVIEW development architecture (version 7.1) and freely available, this system provides precisely timed auditory and visual stimuli to a subject while recording analog data and timestamps of neural activity retrieved from a window discriminator. The system utilizes the most recent real-time (RT) technology in order to provide not only a guaranteed data acquisition rate of 1 kHz, but a much more difficult to achieve guaranteed system response time of 1 ms. The system interface is windows-based and easy to use, providing a host of configurable options for end-user customization. PMID:15698659

Compositional Mapping of the Transantarctic Mountains Using Orbital Reflectance Data

NASA Astrophysics Data System (ADS)

Salvatore, M. R.; Niebuhr, S.; Morin, P. J.; Cox, S.

2014-12-01

We report on our progress of remotely mapping compositional variations throughout the Transantarctic Mountains (TAM) using orbital spectroscopic data. These techniques were originally proven effective in Antarctica using moderate spatial resolution (30 m/pixel) Advanced Land Imager (ALI) data, and showed great successes in identifying even minor variations in composition throughout the McMurdo Dry Valleys (MDV) [Salvatore et al., 2013]. However, due to the orbital inclination of the Earth Observing-1 spacecraft, ALI is unable to image the central and southern TAM, making comparable studies at comparable resolutions impossible on a continental scale. Fortunately, the WorldView-2 satellite (DigitalGlobe, Inc.) boasts high-resolution (2 m/pixel) multispectral capabilities, with 8 spectral bands located between 427 nm and 908 nm, and is able to image the entirety of the TAM through off-nadir pointing capabilities. This provides the ability to continue our remote spectral mapping campaign throughout the TAM to identify compositional variations in support of past and future field operations. We present an updated map of relative spectral variability (RSV) in the vicinity of Shackleton Glacier. This mapping product consists of 91 individual WorldView-2 images, each corrected to top-of-atmosphere radiance and parameterized to highlight known compositional properties. The mapped area covers approximately 17,850 square kilometers of ice-covered and exposed terrain. Compositional variations are easily mapped, and small-scale variations in iron-bearing mineralogy are particularly well resolved. We also describe our updated atmospheric correction algorithm for the WorldView-2 dataset, which utilizes in-scene techniques to derive surface reflectance and does not necessitate the use of radiative transfer modeling. Our technique is validated using laboratory reflectance measurements. In conjunction with the Polar Rock Repository at the Ohio State University, we have measured hundreds of individual samples in an effort to verify and "ground-truth" this atmospheric removal algorithm. Using these methodologies and revised techniques, our objective is to make a fully calibrated and atmospherically corrected spectral map of the central TAM available to the scientific community.

Mapping implicit spectral methods to distributed memory architectures

NASA Technical Reports Server (NTRS)

Overman, Andrea L.; Vanrosendale, John

1991-01-01

Spectral methods were proven invaluable in numerical simulation of PDEs (Partial Differential Equations), but the frequent global communication required raises a fundamental barrier to their use on highly parallel architectures. To explore this issue, a 3-D implicit spectral method was implemented on an Intel hypercube. Utilization of about 50 percent was achieved on a 32 node iPSC/860 hypercube, for a 64 x 64 x 64 Fourier-spectral grid; finer grids yield higher utilizations. Chebyshev-spectral grids are more problematic, since plane-relaxation based multigrid is required. However, by using a semicoarsening multigrid algorithm, and by relaxing all multigrid levels concurrently, relatively high utilizations were also achieved in this harder case.

Use of Single- versus Multiple-Fraction Palliative Radiation Therapy for Bone Metastases: Population-Based Analysis of 16,898 Courses in a Canadian Province

DOE Office of Scientific and Technical Information (OSTI.GOV)

Olson, Robert A., E-mail: rolson2@bccancer.bc.ca; University of Northern British Columbia, Prince George, British Columbia; University of British Columbia, Vancouver, British Columbia

2014-08-01

Purpose: There is abundant evidence that a single fraction (SF) of palliative radiation therapy (RT) for bone metastases is equivalent to more protracted and costly multiple fraction courses. Despite this, there is low utilization of SFRT internationally. We sought to determine the utilization of SFRT in a population-based, publicly funded health care system. Methods and Materials: All consecutive patients with bone metastases treated with RT during 2007 to 2011 in British Columbia (BC) were identified. Associations between utilization of SFRT and patient and provider characteristics were investigated. Results: A total of 16,898 courses of RT were delivered to 8601 patients.more » SFRT was prescribed 49% of the time. There were positive relationships among SFRT utilization and primary tumor group (P<.001; most commonly in prostate cancer), worse prognosis (P<.001), increasing physician experience (P<.001), site of metastases (P<.001; least for spine metastases), and area of training (P<.001; most commonly for oncologists trained in the United Kingdom). There was wide variation in the prescription of SFRT across 5 regional cancer centers, ranging from 25.5% to 73.4%, which persisted after controlling for other, potentially confounding factors (P<.001). Conclusions: The large variability in SFRT utilization across BC Cancer Agency (BCCA) cancer centers suggests there is a strong cultural effect, where physicians' use of SFRT is influenced by their colleagues' practice. SFRT use in BC was similar to that in other Canadian and western European reports but strikingly higher than in the United States. Further work is needed to standardize SFRT prescribing practices internationally for this common indication for RT, with the potential for huge health system cost savings and substantial improvements in patients' quality of life.« less

Terrestrial hyperspectral image shadow restoration through fusion with terrestrial lidar

NASA Astrophysics Data System (ADS)

Hartzell, Preston J.; Glennie, Craig L.; Finnegan, David C.; Hauser, Darren L.

2017-05-01

Recent advances in remote sensing technology have expanded the acquisition and fusion of active lidar and passive hyperspectral imagery (HSI) from exclusively airborne observations to include terrestrial modalities. In contrast to airborne collection geometry, hyperspectral imagery captured from terrestrial cameras is prone to extensive solar shadowing on vertical surfaces leading to reductions in pixel classification accuracies or outright removal of shadowed areas from subsequent analysis tasks. We demonstrate the use of lidar spatial information for sub-pixel HSI shadow detection and the restoration of shadowed pixel spectra via empirical methods that utilize sunlit and shadowed pixels of similar material composition. We examine the effectiveness of radiometrically calibrated lidar intensity in identifying these similar materials in sun and shade conditions and further evaluate a restoration technique that leverages ratios derived from the overlapping lidar laser and HSI wavelengths. Simulations of multiple lidar wavelengths, i.e., multispectral lidar, indicate the potential for HSI spectral restoration that is independent of the complexity and costs associated with rigorous radiometric transfer models, which have yet to be developed for horizontal-viewing terrestrial HSI sensors. The spectral restoration performance of shadowed HSI pixels is quantified for imagery of a geologic outcrop through improvements in spectral shape, spectral scale, and HSI band correlation.

Joint retrieval of aerosol and water-leaving radiance from multispectral, multiangular and polarimetric measurements over ocean

NASA Astrophysics Data System (ADS)

Xu, Feng; Dubovik, Oleg; Zhai, Peng-Wang; Diner, David J.; Kalashnikova, Olga V.; Seidel, Felix C.; Litvinov, Pavel; Bovchaliuk, Andrii; Garay, Michael J.; van Harten, Gerard; Davis, Anthony B.

2016-07-01

An optimization approach has been developed for simultaneous retrieval of aerosol properties and normalized water-leaving radiance (nLw) from multispectral, multiangular, and polarimetric observations over ocean. The main features of the method are (1) use of a simplified bio-optical model to estimate nLw, followed by an empirical refinement within a specified range to improve its accuracy; (2) improved algorithm convergence and stability by applying constraints on the spatial smoothness of aerosol loading and Chlorophyll a (Chl a) concentration across neighboring image patches and spectral constraints on aerosol optical properties and nLw across relevant bands; and (3) enhanced Jacobian calculation by modeling and storing the radiative transfer (RT) in aerosol/Rayleigh mixed layer, pure Rayleigh-scattering layers, and ocean medium separately, then coupling them to calculate the field at the sensor. This approach avoids unnecessary and time-consuming recalculations of RT in unperturbed layers in Jacobian evaluations. The Markov chain method is used to model RT in the aerosol/Rayleigh mixed layer and the doubling method is used for the uniform layers of the atmosphere-ocean system. Our optimization approach has been tested using radiance and polarization measurements acquired by the Airborne Multiangle SpectroPolarimetric Imager (AirMSPI) over the AERONET USC_SeaPRISM ocean site (6 February 2013) and near the AERONET La Jolla site (14 January 2013), which, respectively, reported relatively high and low aerosol loadings. Validation of the results is achieved through comparisons to AERONET aerosol and ocean color products. For comparison, the USC_SeaPRISM retrieval is also performed by use of the Generalized Retrieval of Aerosol and Surface Properties algorithm (Dubovik et al., 2011). Uncertainties of aerosol and nLw retrievals due to random and systematic instrument errors are analyzed by truth-in/truth-out tests with three Chl a concentrations, five aerosol loadings, three different types of aerosols, and nine combinations of solar incidence and viewing geometries.

Application of AI techniques to infer vegetation characteristics from directional reflectance(s)

NASA Technical Reports Server (NTRS)

Kimes, D. S.; Smith, J. A.; Harrison, P. A.; Harrison, P. R.

1994-01-01

Traditionally, the remote sensing community has relied totally on spectral knowledge to extract vegetation characteristics. However, there are other knowledge bases (KB's) that can be used to significantly improve the accuracy and robustness of inference techniques. Using AI (artificial intelligence) techniques a KB system (VEG) was developed that integrates input spectral measurements with diverse KB's. These KB's consist of data sets of directional reflectance measurements, knowledge from literature, and knowledge from experts which are combined into an intelligent and efficient system for making vegetation inferences. VEG accepts spectral data of an unknown target as input, determines the best techniques for inferring the desired vegetation characteristic(s), applies the techniques to the target data, and provides a rigorous estimate of the accuracy of the inference. VEG was developed to: infer spectral hemispherical reflectance from any combination of nadir and/or off-nadir view angles; infer percent ground cover from any combination of nadir and/or off-nadir view angles; infer unknown view angle(s) from known view angle(s) (known as view angle extension); and discriminate between user defined vegetation classes using spectral and directional reflectance relationships developed from an automated learning algorithm. The errors for these techniques were generally very good ranging between 2 to 15% (proportional root mean square). The system is designed to aid scientists in developing, testing, and applying new inference techniques using directional reflectance data.

Choice reaction time to movement of eccentric visual targets during concurrent rotary acceleration

NASA Technical Reports Server (NTRS)

Hamerman, J. A.

1979-01-01

This study investigates the influence of concurrent rotary acceleration on choice reaction time (RT) to a small, accelerating visual cursor on a cathode-ray tube. Subjects sat in an enclosed rotating device at the center of rotation and observed a 3-mm dot accelerating at different rates across a cathode-ray tube. The dot was viewed at various eccentricities under conditions of visual stimulation alone and with concurrent rotary acceleration. Subjects responded to both vertical and horizontal dot movements. There was a significant inverse relationship between choice RT and level of dot acceleration (p less than .001), and a significant direct relationship between choice RT and eccentricity (p less than .001). There was no significant difference between choice RT to vertical or horizontal dot motion (p greater than .25), and choice RT was not significantly affected by concurrent rotary acceleration (p greater than .10). The results are discussed in terms of the effects of vestibular stimulation on choice RT to visual motion.

Structural basis of suppression of host translation termination by Moloney Murine Leukemia Virus

NASA Astrophysics Data System (ADS)

Tang, Xuhua; Zhu, Yiping; Baker, Stacey L.; Bowler, Matthew W.; Chen, Benjamin Jieming; Chen, Chen; Hogg, J. Robert; Goff, Stephen P.; Song, Haiwei

2016-06-01

Retroviral reverse transcriptase (RT) of Moloney murine leukemia virus (MoMLV) is expressed in the form of a large Gag-Pol precursor protein by suppression of translational termination in which the maximal efficiency of stop codon read-through depends on the interaction between MoMLV RT and peptidyl release factor 1 (eRF1). Here, we report the crystal structure of MoMLV RT in complex with eRF1. The MoMLV RT interacts with the C-terminal domain of eRF1 via its RNase H domain to sterically occlude the binding of peptidyl release factor 3 (eRF3) to eRF1. Promotion of read-through by MoMLV RNase H prevents nonsense-mediated mRNA decay (NMD) of mRNAs. Comparison of our structure with that of HIV RT explains why HIV RT cannot interact with eRF1. Our results provide a mechanistic view of how MoMLV manipulates the host translation termination machinery for the synthesis of its own proteins.

An Overview of Plume Tracker: Mapping Volcanic Emissions with Interactive Radiative Transfer Modeling

NASA Astrophysics Data System (ADS)

Realmuto, V. J.; Berk, A.; Guiang, C.

2014-12-01

Infrared remote sensing is a vital tool for the study of volcanic plumes, and radiative transfer (RT) modeling is required to derive quantitative estimation of the sulfur dioxide (SO2), sulfate aerosol (SO4), and silicate ash (pulverized rock) content of these plumes. In the thermal infrared, we must account for the temperature, emissivity, and elevation of the surface beneath the plume, plume altitude and thickness, and local atmospheric temperature and humidity. Our knowledge of these parameters is never perfect, and interactive mapping allows us to evaluate the impact of these uncertainties on our estimates of plume composition. To enable interactive mapping, the Jet Propulsion Laboratory is collaborating with Spectral Sciences, Inc., (SSI) to develop the Plume Tracker toolkit. This project is funded by a NASA AIST Program Grant (AIST-11-0053) to SSI. Plume Tracker integrates (1) retrieval procedures for surface temperature and emissivity, SO2, NH3, or CH4 column abundance, and scaling factors for H2O vapor and O3 profiles, (2) a RT modeling engine based on MODTRAN, and (3) interactive visualization and analysis utilities under a single graphics user interface. The principal obstacle to interactive mapping is the computational overhead of the RT modeling engine. Under AIST-11-0053 we have achieved a 300-fold increase in the performance of the retrieval procedures through the use of indexed caches of model spectra, optimization of the minimization procedures, and scaling of the effects of surface temperature and emissivity on model radiance spectra. In the final year of AIST-11-0053 we will implement parallel processing to exploit multi-core CPUs and cluster computing, and optimize the RT engine to eliminate redundant calculations when iterating over a range of gas concentrations. These enhancements will result in an additional 8 - 12X increase in performance. In addition to the improvements in performance, we have improved the accuracy of the Plume Tracker retrievals through refinements in the description of surface emissivity and use of vector projection to define the misfit between model and observed spectra. Portions of this research were conducted at the Jet Propulsion Laboratory, California Institute of Technology, under contract to the National Aeronautics and Space Administration.

Efficient Optical Logic, Interconnections and Processing Using Quantum Confined Structures

DTIC Science & Technology

1991-05-01

No bis I With bias Ra ( b ’ OotI o lNo bias Use Il) felectro-refraicc n to phase-s’:t A- X I 3 Wavelength 3 Figure II-1. Efficient modulation in a...operation. The top (bottom) mirror of an AFP structure has an amplitude reflection coefficient of rt( b ) and power reflectivity of RT( B )=Ir0)12, viewed...and ( b ) for the case of a=O and a=ln(rb/rt), respectively. Adding (1) and (2), we obtain the total amplitude reflection rto as: -13- I Ii/V aoabl

Upgrading and testing program for narrow band high resolution planetary IR imaging spectrometer

NASA Technical Reports Server (NTRS)

Wattson, R. B.; Rappaport, S.

1977-01-01

An imaging spectrometer, intended primarily for observations of the outer planets, which utilizes an acoustically tuned optical filter (ATOF) and a charge coupled device (CCD) television camera was modified to improve spatial resolution and sensitivity. The upgraded instrument was a spatial resolving power of approximately 1 arc second, as defined by an f/7 beam at the CCD position and it has this resolution over the 50 arc second field of view. Less vignetting occurs and sensitivity is four times greater. The spectral resolution of 15 A over the wavelength interval 6500 A - 11,000 A is unchanged. Mechanical utility has been increased by the use of a honeycomb optical table, mechanically rigid yet adjustable optical component mounts, and a camera focus translation stage. The upgraded instrument was used to observe Venus and Saturn.

Advanced Image Processing for NASA Applications

NASA Technical Reports Server (NTRS)

LeMoign, Jacqueline

2007-01-01

The future of space exploration will involve cooperating fleets of spacecraft or sensor webs geared towards coordinated and optimal observation of Earth Science phenomena. The main advantage of such systems is to utilize multiple viewing angles as well as multiple spatial and spectral resolutions of sensors carried on multiple spacecraft but acting collaboratively as a single system. Within this framework, our research focuses on all areas related to sensing in collaborative environments, which means systems utilizing intracommunicating spatially distributed sensor pods or crafts being deployed to monitor or explore different environments. This talk will describe the general concept of sensing in collaborative environments, will give a brief overview of several technologies developed at NASA Goddard Space Flight Center in this area, and then will concentrate on specific image processing research related to that domain, specifically image registration and image fusion.

Diagnostic Capability of Peripapillary Retinal Thickness in Glaucoma Using 3D Volume Scans

PubMed Central

Simavli, Huseyin; Que, Christian John; Akduman, Mustafa; Rizzo, Jennifer L.; Tsikata, Edem; de Boer, Johannes F.; Chen, Teresa C.

2015-01-01

Purpose To determine the diagnostic capability of spectral domain optical coherence tomography (SD-OCT) peripapillary retinal thickness (RT) measurements from 3-dimensional (3D) volume scans for primary open angle glaucoma (POAG). Design Cross-sectional study. Methods Setting Institutional Study population 156 patients (89 POAG and 67 normal subjects) Observation procedures One eye of each subject was included. SD-OCT peripapillary RT values from 3D volume scans were calculated for four quadrants of three different sized annuli. Peripapillary retinal nerve fiber layer (RNFL) thickness values were also determined. Main outcome measures Area under the receiver operating characteristic curve (AUROC) values, sensitivity, specificity, positive and negative predictive values, and positive and negative likelihood ratios. Results The top five RT AUROCs for all glaucoma patients and for a subset of early glaucoma patients were for the inferior quadrant of outer circumpapillary annulus of circular grid (OCA) 1 (0.959, 0.939), inferior quadrant of OCA2 (0.945, 0.921), superior quadrant of OCA1 (0.890, 0.811), inferior quadrant of OCA3 (0.887, 0.854), and superior quadrant of OCA2 (0.879, 0.807). Smaller RT annuli OCA1 and OCA2 consistently showed better diagnostic performance than the larger RT annulus OCA3. For both RNFL and RT measurements, best AUROC values were found for inferior RT OCA1 and OCA2, followed by inferior and overall RNFL thickness. Conclusion Peripapillary RT measurements from 3D volume scans showed excellent diagnostic performance for detecting both glaucoma and early glaucoma patients. Peripapillary RT values have the same or better diagnostic capability compared to peripapillary RNFL thickness measurements, while also having fewer algorithm errors. PMID:25498354

1. Front view of steam engine and mill, looking NE, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

1. Front view of steam engine and mill, looking NE, showing (l to r) 6-column beam engine, flywheel, reduction gears and 3-roll cane mill. - Hacienda Azucarera La Esperanza, Steam Engine & Mill, 2.65 Mi. N of PR Rt. 2 Bridge over Manati River, Manati, Manati Municipio, PR

Individual Differences in Infant Oculomotor Behavior During the Viewing of Complex Naturalistic Scenes

PubMed Central

Wass, Sam V; Smith, Tim J

2014-01-01

Little research hitherto has examined how individual differences in attention, as assessed using standard experimental paradigms, relate to individual differences in how attention is spontaneously allocated in more naturalistic contexts. Here, we analyzed the time intervals between refoveating eye movements (fixation durations) while typically developing 11-month-old infants viewed a 90-min battery ranging from complex dynamic to noncomplex static materials. The same infants also completed experimental assessments of cognitive control, psychomotor reaction times (RT), processing speed (indexed via peak look during habituation), and arousal (indexed via tonic pupil size). High test–retest reliability was found for fixation duration, across testing sessions and across types of viewing material. Increased cognitive control and increased arousal were associated with reduced variability in fixation duration. For fixations to dynamic stimuli, in which a large proportion of saccades may be exogenously cued, we found that psychomotor RT measures were most predictive of mean fixation duration; for fixations to static stimuli, in contrast, in which there is less exogenous attentional capture, we found that psychomotor RT did not predict performance, but that measures of cognitive control and arousal did. The implications of these findings for understanding the development of attentional control in naturalistic settings are discussed. PMID:25635173

Application of Suomi-NPP Green Vegetation Fraction and NUCAPS for Improving Regional Numerical Weather Prediction

NASA Technical Reports Server (NTRS)

Case, Jonathan L.; Berndt, Emily B.; Srikishen, Jayanthi; Zavodsky, Bradley T.

2014-01-01

The NASA SPoRT Center is working to incorporate Suomi-NPP products into its research and transition activities to improve regional numerical weather prediction (NWP). Specifically, SPoRT seeks to utilize two data products from NOAA/NESDIS: (1) daily global VIIRS green vegetation fraction (GVF), and (2) NOAA Unique CrIS and ATMS Processing System (NUCAPS) temperature and moisture retrieved profiles. The goal of (1) is to improve the representation of vegetation in the Noah land surface model (LSM) over existing climatological GVF datasets in order to improve the land-atmosphere energy exchanges in NWP models and produce better temperature, moisture, and precipitation forecasts. The goal of (2) is to assimilate NUCAPS retrieved profiles into the Gridpoint Statistical Interpolation (GSI) data assimilation system to assess the impact on a summer pre-frontal convection case. Most regional NWP applications make use of a monthly GVF climatology for use in the Noah LSM within the Weather Research and Forecasting (WRF) model. The GVF partitions incoming energy into direct surface heating/evaporation over bare soil versus evapotranspiration processes over vegetated surfaces. Misrepresentations of the fractional coverage of vegetation during anomalous weather/climate regimes (e.g., early/late bloom or freeze; drought) can lead to poor NWP model results when land-atmosphere feedback is important. SPoRT has been producing a daily MODIS GVF product based on the University of Wisconsin Direct Broadcast swaths of Normalized Difference Vegetation Index (NDVI). While positive impacts have been demonstrated in the WRF model for some cases, the reflectances composing these NDVI do not correct for atmospheric aerosols nor satellite view angle, resulting in temporal noisiness at certain locations (especially heavy vegetation). The method behind the NESDIS VIIRS GVF is expected to alleviate the issues seen in the MODIS GVF real-time product, thereby offering a higher-quality dataset for modeling applications. SPoRT is evaluating the VIIRS GVF data against the MODIS real-time and climatology GVF in both WRF and the NASA Land Information System. SPoRT has a history of assimilating hyperspectral infrared retrieved profiles

Real-time magnetic resonance imaging-guided transcatheter aortic valve replacement.

PubMed

Miller, Justin G; Li, Ming; Mazilu, Dumitru; Hunt, Tim; Horvath, Keith A

2016-05-01

To demonstrate the feasibility of Real-time magnetic resonance imaging (rtMRI) guided transcatheter aortic valve replacement (TAVR) with an active guidewire and an MRI compatible valve delivery catheter system in a swine model. The CoreValve system was minimally modified to be MRI-compatible by replacing the stainless steel components with fluoroplastic resin and high-density polyethylene components. Eight swine weighing 60-90 kg underwent rtMRI-guided TAVR with an active guidewire through a left subclavian approach. Two imaging planes (long-axis view and short-axis view) were used simultaneously for real-time imaging during implantation. Successful deployment was performed without rapid ventricular pacing or cardiopulmonary bypass. Postdeployment images were acquired to evaluate the final valve position in addition to valvular and cardiac function. Our results show that the CoreValve can be easily and effectively deployed through a left subclavian approach using rtMRI guidance, a minimally modified valve delivery catheter system, and an active guidewire. This method allows superior visualization before deployment, thereby allowing placement of the valve with pinpoint accuracy. rtMRI has the added benefit of the ability to perform immediate postprocedural functional assessment, while eliminating the morbidity associated with radiation exposure, rapid ventricular pacing, contrast media renal toxicity, and a more invasive procedure. Use of a commercially available device brings this rtMRI-guided approach closer to clinical reality. Copyright © 2016 The American Association for Thoracic Surgery. Published by Elsevier Inc. All rights reserved.

Multispectral Image Compression for Improvement of Colorimetric and Spectral Reproducibility by Nonlinear Spectral Transform

NASA Astrophysics Data System (ADS)

Yu, Shanshan; Murakami, Yuri; Obi, Takashi; Yamaguchi, Masahiro; Ohyama, Nagaaki

2006-09-01

The article proposes a multispectral image compression scheme using nonlinear spectral transform for better colorimetric and spectral reproducibility. In the method, we show the reduction of colorimetric error under a defined viewing illuminant and also that spectral accuracy can be improved simultaneously using a nonlinear spectral transform called Labplus, which takes into account the nonlinearity of human color vision. Moreover, we show that the addition of diagonal matrices to Labplus can further preserve the spectral accuracy and has a generalized effect of improving the colorimetric accuracy under other viewing illuminants than the defined one. Finally, we discuss the usage of the first-order Markov model to form the analysis vectors for the higher order channels in Labplus to reduce the computational complexity. We implement a multispectral image compression system that integrates Labplus with JPEG2000 for high colorimetric and spectral reproducibility. Experimental results for a 16-band multispectral image show the effectiveness of the proposed scheme.

Three-Dimensional Rotation, Twist and Torsion Analyses Using Real-Time 3D Speckle Tracking Imaging: Feasibility, Reproducibility, and Normal Ranges in Pediatric Population.

PubMed

Zhang, Li; Zhang, Jing; Han, Wei; Gao, Jun; He, Lin; Yang, Yali; Yin, Ping; Xie, Mingxing; Ge, Shuping

2016-01-01

The specific aim of this study was to evaluate the feasibility, reproducibility and maturational changes of LV rotation, twist and torsion variables by real-time 3D speckle-tracking echocardiography (RT3DSTE) in children. A prospective study was conducted in 347 consecutive healthy subjects (181 males/156 females, mean age 7.12 ± 5.3 years, and range from birth to 18-years) using RT 3D echocardiography (3DE). The LV rotation, twist and torsion measurements were made off-line using TomTec software. Manual landmark selection and endocardial border editing were performed in 3 planes (apical "2"-, "4"-, and "3"- chamber views) and semi-automated tracking yielded LV rotation, twist and torsion measurements. LV rotation, twist and torsion analysis by RT 3DSTE were feasible in 307 out of 347 subjects (88.5%). There was no correlation between rotation or twist and age, height, weight, BSA or heart rate, respectively. However, there was statistically significant, but very modest correlation between LV torsion and age (R2 = 0.036, P< 0.001). The normal ranges were defined for rotation and twist in this cohort, and for torsion for each age group. The intra-observer and inter-observer variabilities for apical and basal rotation, twist and torsion ranged from 7.3% ± 3.8% to 12.3% ± 8.8% and from 8.8% ± 4.6% to 15.7% ± 10.1%, respectively. We conclude that analysis of LV rotation, twist and torsion by this new RT3D STE is feasible and reproducible in pediatric population. There is no maturational change in rotation and twist, but torsion decreases with age in this cohort. Further refinement is warranted to validate the utility of this new methodology in more sensitive and quantitative evaluation of congenital and acquired heart diseases in children.

WE-E-BRB-11: Riview a Web-Based Viewer for Radiotherapy.

PubMed

Apte, A; Wang, Y; Deasy, J

2012-06-01

Collaborations involving radiotherapy data collection, such as the recently proposed international radiogenomics consortium, require robust, web-based tools to facilitate reviewing treatment planning information. We present the architecture and prototype characteristics for a web-based radiotherapy viewer. The web-based environment developed in this work consists of the following components: 1) Import of DICOM/RTOG data: CERR was leveraged to import DICOM/RTOG data and to convert to database friendly RT objects. 2) Extraction and Storage of RT objects: The scan and dose distributions were stored as .png files per slice and view plane. The file locations were written to the MySQL database. Structure contours and DVH curves were written to the database as numeric data. 3) Web interfaces to query, retrieve and visualize the RT objects: The Web application was developed using HTML 5 and Ruby on Rails (RoR) technology following the MVC philosophy. The open source ImageMagick library was utilized to overlay scan, dose and structures. The application allows users to (i) QA the treatment plans associated with a study, (ii) Query and Retrieve patients matching anonymized ID and study, (iii) Review up to 4 plans simultaneously in 4 window panes (iv) Plot DVH curves for the selected structures and dose distributions. A subset of data for lung cancer patients was used to prototype the system. Five user accounts were created to have access to this study. The scans, doses, structures and DVHs for 10 patients were made available via the web application. A web-based system to facilitate QA, and support Query, Retrieve and the Visualization of RT data was prototyped. The RIVIEW system was developed using open source and free technology like MySQL and RoR. We plan to extend the RIVIEW system further to be useful in clinical trial data collection, outcomes research, cohort plan review and evaluation. © 2012 American Association of Physicists in Medicine.

Evolutionary Computing Methods for Spectral Retrieval

NASA Technical Reports Server (NTRS)

Terrile, Richard; Fink, Wolfgang; Huntsberger, Terrance; Lee, Seugwon; Tisdale, Edwin; VonAllmen, Paul; Tinetti, Geivanna

2009-01-01

A methodology for processing spectral images to retrieve information on underlying physical, chemical, and/or biological phenomena is based on evolutionary and related computational methods implemented in software. In a typical case, the solution (the information that one seeks to retrieve) consists of parameters of a mathematical model that represents one or more of the phenomena of interest. The methodology was developed for the initial purpose of retrieving the desired information from spectral image data acquired by remote-sensing instruments aimed at planets (including the Earth). Examples of information desired in such applications include trace gas concentrations, temperature profiles, surface types, day/night fractions, cloud/aerosol fractions, seasons, and viewing angles. The methodology is also potentially useful for retrieving information on chemical and/or biological hazards in terrestrial settings. In this methodology, one utilizes an iterative process that minimizes a fitness function indicative of the degree of dissimilarity between observed and synthetic spectral and angular data. The evolutionary computing methods that lie at the heart of this process yield a population of solutions (sets of the desired parameters) within an accuracy represented by a fitness-function value specified by the user. The evolutionary computing methods (ECM) used in this methodology are Genetic Algorithms and Simulated Annealing, both of which are well-established optimization techniques and have also been described in previous NASA Tech Briefs articles. These are embedded in a conceptual framework, represented in the architecture of the implementing software, that enables automatic retrieval of spectral and angular data and analysis of the retrieved solutions for uniqueness.

Hydrologic Conditions Viewed by the Nimbus Meteorological Satellites

NASA Technical Reports Server (NTRS)

Rabchevsky, G. A.

1971-01-01

The unexploited value of the Nimbus meteorological sensor data relates to the satellites' ability for global, temporal, repetitive and uniform tonal and spatial coverage of the earth's surface. Examples are presented illustrating how synoptic views of large areas increase interpretive capability and enable focusing on large targets of interest. The effect of resolution of the Nimbus imaging systems on these observations is discussed, together with the assessment of the areal and temporal magnitude of changes observed by these systems. Two case studies are presented exemplifying the satellites' ability for repetitive observations enabling phenomena to be monitored under special conditions. One study deals with changes observed in the Antarctic ice conditions utilizing the Nimbus 2 and 3 television picture data. The other study deals with terrestrial changes in the Mississippi River Valley and the Niger River Valley (Africa), observed primarily in the 0.7 to 1.3 micron spectral band.

Forest cover type analysis of New England forests using innovative WorldView-2 imagery

NASA Astrophysics Data System (ADS)

Kovacs, Jenna M.

For many years, remote sensing has been used to generate land cover type maps to create a visual representation of what is occurring on the ground. One significant use of remote sensing is the identification of forest cover types. New England forests are notorious for their especially complex forest structure and as a result have been, and continue to be, a challenge when classifying forest cover types. To most accurately depict forest cover types occurring on the ground, it is essential to utilize image data that have a suitable combination of both spectral and spatial resolution. The WorldView-2 (WV2) commercial satellite, launched in 2009, is the first of its kind, having both high spectral and spatial resolutions. WV2 records eight bands of multispectral imagery, four more than the usual high spatial resolution sensors, and has a pixel size of 1.85 meters at the nadir. These additional bands have the potential to improve classification detail and classification accuracy of forest cover type maps. For this reason, WV2 imagery was utilized on its own, and in combination with Landsat 5 TM (LS5) multispectral imagery, to evaluate whether these image data could more accurately classify forest cover types. In keeping with recent developments in image analysis, an Object-Based Image Analysis (OBIA) approach was used to segment images of Pawtuckaway State Park and nearby private lands, an area representative of the typical complex forest structure found in the New England region. A Classification and Regression Tree (CART) analysis was then used to classify image segments at two levels of classification detail. Accuracies for each forest cover type map produced were generated using traditional and area-based error matrices, and additional standard accuracy measures (i.e., KAPPA) were generated. The results from this study show that there is value in analyzing imagery with both high spectral and spatial resolutions, and that WV2's new and innovative bands can be useful for the classification of complex forest structures.

Surveillance and Radiation Therapy for Stage I Seminoma—Have We Learned From the Evidence?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Glaser, Scott M.; Vargo, John A.; Balasubramani, Goundappa K.

2016-01-01

Purpose: To analyze, in the setting of stage I seminoma, the factors affecting adjuvant treatment decisions and resulting survival outcomes, using a national dataset. Methods and Materials: We identified 33,094 stage I seminoma patients after orchiectomy from 1998 to 2012 from the National Cancer Data Base. Factors affecting treatment selection (active surveillance [AS] vs adjuvant treatment [AT]) were identified using a parsimonious multivariate logistic regression model. Propensity scores for treatment decision were generated and incorporated into a multivariate Cox regression analysis of overall survival. This process was then repeated within the AT cohort for factors predictive for chemotherapy [CT] versus radiationmore » therapy [RT]. Results: Only 33% of patients received AS, and 65% received AT (89% RT and 11% CT). From 1998 to 2012 the proportion receiving AS increased from 23% to 60%, whereas RT utilization decreased from 73% to 21%, and CT utilization increased from 2% to 17%. Utilization of low-dose RT increased from 1.5% in 1999 to 34% in 2012. There was a small absolute overall survival advantage to AT over AS at 10 years (95.0% vs 93.4%, propensity adjusted hazard ratio 0.58, P<.0005). Conclusions: There has been a significant increase in use of AS for stage I seminoma, influenced by both sociodemogrpahic and clinicopathologic factors. Between AT options, there has been significant increase in use of CT, mirrored by a decline in use of RT. Although overall survival remains high for all 3 treatment strategies, AT seems to be associated with a small absolute survival advantage over AS up to 10 years out from diagnosis.« less

Time-resolved hard x-ray spectrometer

NASA Astrophysics Data System (ADS)

Moy, Kenneth; Cuneo, Michael; McKenna, Ian; Keenan, Thomas; Sanford, Thomas; Mock, Ray

2006-08-01

Wired array studies are being conducted at the SNL Z accelerator to maximize the x-ray generation for inertial confinement fusion targets and high energy density physics experiments. An integral component of these studies is the characterization of the time-resolved spectral content of the x-rays. Due to potential spatial anisotropy in the emitted radiation, it is also critical to diagnose the time-evolved spectral content in a space-resolved manner. To accomplish these two measurement goals, we developed an x-ray spectrometer using a set of high-speed detectors (silicon PIN diodes) with a collimated field-of-view that converged on a 1-cm-diameter spot at the pinch axis. Spectral discrimination is achieved by placing high Z absorbers in front of these detectors. We built two spectrometers to permit simultaneous different angular views of the emitted radiation. Spectral data have been acquired from recent Z shots for the radial and axial (polar) views. UNSPEC 1 has been adapted to analyze and unfold the measured data to reconstruct the x-ray spectrum. The unfold operator code, UFO2, is being adapted for a more comprehensive spectral unfolding treatment.

SeaWiFS Technical Report Series. Volume 39; SeaWiFS Calibration Topics

NASA Technical Reports Server (NTRS)

Hooker, Stanford B. (Editor); Firestone, Elaine R. (Editor); Barnes, Robert A.; Yeh, Eueng-nan; Eplee, Robert E.

1996-01-01

For Earth-observing satellite instruments, it was standard to consider each instrument band to have a spectral response that is infinitely narrow, i.e., to have a response from a single wavelength. The Sea-viewing Wide Field-of-view Sensor (SeaWiFS) bands, however, have nominal spectral bandwidths of 20 and 40nm. These bandwidths affect the SeaWiFS measurements on orbit. The effects are also linked to the manner in which the instrument was calibrated and to the spectral shape of the radiance that SeaWiFS views. Currently, SeaWiFS is calibrated such that the digital counts from each instrument band are linked to the Earth-exiting radiance at an individual center wavelength. Before launch, SeaWiFS will be recalibrated so that the digital counts from each band will be linked to the Earth-exiting radiance integrated over the spectral response of that band. In this technical memorandum, the effects of the instrument calibration and the source spectral shape on SeaWiFS measurements, including the in-band and out-of-band responses, and the center wavelengths are discussed.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mackillop, William J., E-mail: william.mackillop@krcc.on.ca; Kong, Weidong; Brundage, Michael

Purpose: Estimates of the appropriate rate of use of radiation therapy (RT) are required for planning and monitoring access to RT. Our objective was to compare estimates of the appropriate rate of use of RT derived from mathematical models, with the rate observed in a population of patients with optimal access to RT. Methods and Materials: The rate of use of RT within 1 year of diagnosis (RT{sub 1Y}) was measured in the 134,541 cases diagnosed in Ontario between November 2009 and October 2011. The lifetime rate of use of RT (RT{sub LIFETIME}) was estimated by the multicohort utilization tablemore » method. Poisson regression was used to evaluate potential barriers to access to RT and to identify a benchmark subpopulation with unimpeded access to RT. Rates of use of RT were measured in the benchmark subpopulation and compared with published evidence-based estimates of the appropriate rates. Results: The benchmark rate for RT{sub 1Y}, observed under conditions of optimal access, was 33.6% (95% confidence interval [CI], 33.0%-34.1%), and the benchmark for RT{sub LIFETIME} was 41.5% (95% CI, 41.2%-42.0%). Benchmarks for RT{sub LIFETIME} for 4 of 5 selected sites and for all cancers combined were significantly lower than the corresponding evidence-based estimates. Australian and Canadian evidence-based estimates of RT{sub LIFETIME} for 5 selected sites differed widely. RT{sub LIFETIME} in the overall population of Ontario was just 7.9% short of the benchmark but 20.9% short of the Australian evidence-based estimate of the appropriate rate. Conclusions: Evidence-based estimates of the appropriate lifetime rate of use of RT may overestimate the need for RT in Ontario.« less

Imaging using a supercontinuum laser to assess tumors in patients with breast carcinoma

NASA Astrophysics Data System (ADS)

Sordillo, Laura A.; Sordillo, Peter P.; Alfano, R. R.

2016-03-01

The supercontinuum laser light source has many advantages over other light sources, including broad spectral range. Transmission images of paired normal and malignant breast tissue samples from two patients were obtained using a Leukos supercontinuum (SC) laser light source with wavelengths in the second and third NIR optical windows and an IR- CCD InGaAs camera detector (Goodrich Sensors Inc. high response camera SU320KTSW-1.7RT with spectral response between 900 nm and 1,700 nm). Optical attenuation measurements at the four NIR optical windows were obtained from the samples.

Supporting Valid Decision Making: Uses and Misuses of Assessment Data within the Context of RtI

ERIC Educational Resources Information Center

Ball, Carrie R.; Christ, Theodore J.

2012-01-01

Within an RtI problem-solving context, assessment and decision making generally center around the tasks of problem identification, problem analysis, progress monitoring, and program evaluation. We use this framework to discuss the current state of the literature regarding curriculum based measurement, its technical properties, and its utility for…

Improving Responsiveness to Intervention in a Virtual Publically Supported Program: An Action Research

ERIC Educational Resources Information Center

Kerr, Rachel A.

2014-01-01

The purpose of this action research study was to design, implement, analyze, and evaluate a series of interventions to increase the elementary teachers' utilization of the RtI process. Another purpose of the study was to determine the teachers' background knowledge and perceptions about the Responsiveness to Intervention (RtI) process at the…

Detecting the Presence of Nora Virus in "Drosophila" Utilizing Single Fly RT-PCR

ERIC Educational Resources Information Center

Munn, Bethany; Ericson, Brad; Carlson, Darby J.; Carlson, Kimberly A.

2015-01-01

A single fly RT-PCR protocol has recently been developed to detect the presence of the persistent, horizontally transmitted Nora virus in "Drosophila." Wild-caught flies from Ohio were tested for the presence of the virus, with nearly one-fifth testing positive. The investigation presented can serve as an ideal project for biology…

Mutual information registration of multi-spectral and multi-resolution images of DigitalGlobe's WorldView-3 imaging satellite

NASA Astrophysics Data System (ADS)

Miecznik, Grzegorz; Shafer, Jeff; Baugh, William M.; Bader, Brett; Karspeck, Milan; Pacifici, Fabio

2017-05-01

WorldView-3 (WV-3) is a DigitalGlobe commercial, high resolution, push-broom imaging satellite with three instruments: visible and near-infrared VNIR consisting of panchromatic (0.3m nadir GSD) plus multi-spectral (1.2m), short-wave infrared SWIR (3.7m), and multi-spectral CAVIS (30m). Nine VNIR bands, which are on one instrument, are nearly perfectly registered to each other, whereas eight SWIR bands, belonging to the second instrument, are misaligned with respect to VNIR and to each other. Geometric calibration and ortho-rectification results in a VNIR/SWIR alignment which is accurate to approximately 0.75 SWIR pixel at 3.7m GSD, whereas inter-SWIR, band to band registration is 0.3 SWIR pixel. Numerous high resolution, spectral applications, such as object classification and material identification, require more accurate registration, which can be achieved by utilizing image processing algorithms, for example Mutual Information (MI). Although MI-based co-registration algorithms are highly accurate, implementation details for automated processing can be challenging. One particular challenge is how to compute bin widths of intensity histograms, which are fundamental building blocks of MI. We solve this problem by making the bin widths proportional to instrument shot noise. Next, we show how to take advantage of multiple VNIR bands, and improve registration sensitivity to image alignment. To meet this goal, we employ Canonical Correlation Analysis, which maximizes VNIR/SWIR correlation through an optimal linear combination of VNIR bands. Finally we explore how to register images corresponding to different spatial resolutions. We show that MI computed at a low-resolution grid is more sensitive to alignment parameters than MI computed at a high-resolution grid. The proposed modifications allow us to improve VNIR/SWIR registration to better than ¼ of a SWIR pixel, as long as terrain elevation is properly accounted for, and clouds and water are masked out.

Fast ultra-wideband microwave spectral scanning utilizing photonic wavelength- and time-division multiplexing.

PubMed

Li, Yihan; Kuse, Naoya; Fermann, Martin

2017-08-07

A high-speed ultra-wideband microwave spectral scanning system is proposed and experimentally demonstrated. Utilizing coherent dual electro-optical frequency combs and a recirculating optical frequency shifter, the proposed system realizes wavelength- and time-division multiplexing at the same time, offering flexibility between scan speed and size, weight and power requirements (SWaP). High-speed spectral scanning spanning from ~1 to 8 GHz with ~1.2 MHz spectral resolution is achieved experimentally within 14 µs. The system can be easily scaled to higher bandwidth coverage, faster scanning speed or finer spectral resolution with suitable hardware.

Patterns of Care for Locally Advanced Pancreatic Adenocarcinoma Using the National Cancer Database.

PubMed

Amini, Arya; Jones, Bernard L; Stumpf, Priscilla; Leong, Stephen; Lieu, Christopher H; Weekes, Colin; Davis, S Lindsey; Messersmith, Wells A; Purcell, William T; Ghosh, Debashis; Schefter, Tracey; Goodman, Karyn A

2017-08-01

The role of radiotherapy (RT) in locally advanced pancreatic cancer (LAPC) is uncertain. This study examines patterns of care and survival outcomes of LAPC undergoing chemotherapy alone versus chemotherapy plus RT (C + RT). The National Cancer Database was queried for nonmetastatic LAPC patients who received chemotherapy alone or C + RT. Of the 13,695 patients included, 5306 underwent chemotherapy alone and 4971, C + RT. Use of C + RT declined from 2003 to 2011 (73%-53%), whereas chemotherapy alone increased. Of those receiving RT, rates of intensity-modulated radiotherapy (IMRT) increased (27%-72%), whereas 3-dimensional (3D) RT decreased (73%-28%). Unadjusted 1-year overall survival (OS) was longer for versus chemotherapy (45.6% vs 38.7%), as was 2-year OS (12.9% vs 11.9%) (hazard ratio, 0.88; 0.85-0.91; P < 0.001). Under multivariate analysis, C + RT was associated with improved OS (hazard ratio, 0.84; 0.81-0.87; P < 0.001). On subgroup analysis comparing C + IMRT, C + 3D RT, and chemotherapy alone, 1-year OS was 49.1%, 45.1%, and 38.7%, and 2-year OS was 13.1%, 11.6%, and 11.9% accordingly. Utilization of RT in LAPC is decreasing, whereas chemotherapy alone is increasing. Of patients undergoing RT, rates of IMRT are increasing. Whereas C + IMRT appeared to be associated with improved OS compared with chemotherapy alone, 3D RT was not.

Modern Radiation Therapy for Nodal Non-Hodgkin Lymphoma—Target Definition and Dose Guidelines From the International Lymphoma Radiation Oncology Group

DOE Office of Scientific and Technical Information (OSTI.GOV)

Illidge, Tim, E-mail: Tim.Illidge@ics.manchester.ac.uk; Specht, Lena; Yahalom, Joachim

2014-05-01

Radiation therapy (RT) is the most effective single modality for local control of non-Hodgkin lymphoma (NHL) and is an important component of therapy for many patients. Many of the historic concepts of dose and volume have recently been challenged by the advent of modern imaging and RT planning tools. The International Lymphoma Radiation Oncology Group (ILROG) has developed these guidelines after multinational meetings and analysis of available evidence. The guidelines represent an agreed consensus view of the ILROG steering committee on the use of RT in NHL in the modern era. The roles of reduced volume and reduced doses aremore » addressed, integrating modern imaging with 3-dimensional planning and advanced techniques of RT delivery. In the modern era, in which combined-modality treatment with systemic therapy is appropriate, the previously applied extended-field and involved-field RT techniques that targeted nodal regions have now been replaced by limiting the RT to smaller volumes based solely on detectable nodal involvement at presentation. A new concept, involved-site RT, defines the clinical target volume. For indolent NHL, often treated with RT alone, larger fields should be considered. Newer treatment techniques, including intensity modulated RT, breath holding, image guided RT, and 4-dimensional imaging, should be implemented, and their use is expected to decrease significantly the risk for normal tissue damage while still achieving the primary goal of local tumor control.« less

The moon as a radiometric reference source for on-orbit sensor stability calibration

USGS Publications Warehouse

Stone, T.C.

2009-01-01

The wealth of data generated by the world's Earth-observing satellites, now spanning decades, allows the construction of long-term climate records. A key consideration for detecting climate trends is precise quantification of temporal changes in sensor calibration on-orbit. For radiometer instruments in the solar reflectance wavelength range (near-UV to shortwave-IR), the Moon can be viewed as a solar diffuser with exceptional stability properties. A model for the lunar spectral irradiance that predicts the geometric variations in the Moon's brightness with ???1% precision has been developed at the U.S. Geological Survey in Flagstaff, AZ. Lunar model results corresponding to a series of Moon observations taken by an instrument can be used to stabilize sensor calibration with sub-percent per year precision, as demonstrated by the Sea-viewing Wide Field-of-view Sensor (SeaWiFS). The inherent stability of the Moon and the operational model to utilize the lunar irradiance quantity provide the Moon as a reference source for monitoring radiometric calibration in orbit. This represents an important capability for detecting terrestrial climate change from space-based radiometric measurements.

Concurrent versus sequential sorafenib therapy in combination with radiation for hepatocellular carcinoma.

PubMed

Wild, Aaron T; Gandhi, Nishant; Chettiar, Sivarajan T; Aziz, Khaled; Gajula, Rajendra P; Williams, Russell D; Kumar, Rachit; Taparra, Kekoa; Zeng, Jing; Cades, Jessica A; Velarde, Esteban; Menon, Siddharth; Geschwind, Jean F; Cosgrove, David; Pawlik, Timothy M; Maitra, Anirban; Wong, John; Hales, Russell K; Torbenson, Michael S; Herman, Joseph M; Tran, Phuoc T

2013-01-01

Sorafenib (SOR) is the only systemic agent known to improve survival for hepatocellular carcinoma (HCC). However, SOR prolongs survival by less than 3 months and does not alter symptomatic progression. To improve outcomes, several phase I-II trials are currently examining SOR with radiation (RT) for HCC utilizing heterogeneous concurrent and sequential treatment regimens. Our study provides preclinical data characterizing the effects of concurrent versus sequential RT-SOR on HCC cells both in vitro and in vivo. Concurrent and sequential RT-SOR regimens were tested for efficacy among 4 HCC cell lines in vitro by assessment of clonogenic survival, apoptosis, cell cycle distribution, and γ-H2AX foci formation. Results were confirmed in vivo by evaluating tumor growth delay and performing immunofluorescence staining in a hind-flank xenograft model. In vitro, concurrent RT-SOR produced radioprotection in 3 of 4 cell lines, whereas sequential RT-SOR produced decreased colony formation among all 4. Sequential RT-SOR increased apoptosis compared to RT alone, while concurrent RT-SOR did not. Sorafenib induced reassortment into less radiosensitive phases of the cell cycle through G1-S delay and cell cycle slowing. More double-strand breaks (DSBs) persisted 24 h post-irradiation for RT alone versus concurrent RT-SOR. In vivo, sequential RT-SOR produced the greatest tumor growth delay, while concurrent RT-SOR was similar to RT alone. More persistent DSBs were observed in xenografts treated with sequential RT-SOR or RT alone versus concurrent RT-SOR. Sequential RT-SOR additionally produced a greater reduction in xenograft tumor vascularity and mitotic index than either concurrent RT-SOR or RT alone. In conclusion, sequential RT-SOR demonstrates greater efficacy against HCC than concurrent RT-SOR both in vitro and in vivo. These results may have implications for clinical decision-making and prospective trial design.

Concurrent versus Sequential Sorafenib Therapy in Combination with Radiation for Hepatocellular Carcinoma

PubMed Central

Chettiar, Sivarajan T.; Aziz, Khaled; Gajula, Rajendra P.; Williams, Russell D.; Kumar, Rachit; Taparra, Kekoa; Zeng, Jing; Cades, Jessica A.; Velarde, Esteban; Menon, Siddharth; Geschwind, Jean F.; Cosgrove, David; Pawlik, Timothy M.; Maitra, Anirban; Wong, John; Hales, Russell K.; Torbenson, Michael S.; Herman, Joseph M.; Tran, Phuoc T.

2013-01-01

Sorafenib (SOR) is the only systemic agent known to improve survival for hepatocellular carcinoma (HCC). However, SOR prolongs survival by less than 3 months and does not alter symptomatic progression. To improve outcomes, several phase I-II trials are currently examining SOR with radiation (RT) for HCC utilizing heterogeneous concurrent and sequential treatment regimens. Our study provides preclinical data characterizing the effects of concurrent versus sequential RT-SOR on HCC cells both in vitro and in vivo. Concurrent and sequential RT-SOR regimens were tested for efficacy among 4 HCC cell lines in vitro by assessment of clonogenic survival, apoptosis, cell cycle distribution, and γ-H2AX foci formation. Results were confirmed in vivo by evaluating tumor growth delay and performing immunofluorescence staining in a hind-flank xenograft model. In vitro, concurrent RT-SOR produced radioprotection in 3 of 4 cell lines, whereas sequential RT-SOR produced decreased colony formation among all 4. Sequential RT-SOR increased apoptosis compared to RT alone, while concurrent RT-SOR did not. Sorafenib induced reassortment into less radiosensitive phases of the cell cycle through G1-S delay and cell cycle slowing. More double-strand breaks (DSBs) persisted 24 h post-irradiation for RT alone versus concurrent RT-SOR. In vivo, sequential RT-SOR produced the greatest tumor growth delay, while concurrent RT-SOR was similar to RT alone. More persistent DSBs were observed in xenografts treated with sequential RT-SOR or RT alone versus concurrent RT-SOR. Sequential RT-SOR additionally produced a greater reduction in xenograft tumor vascularity and mitotic index than either concurrent RT-SOR or RT alone. In conclusion, sequential RT-SOR demonstrates greater efficacy against HCC than concurrent RT-SOR both in vitro and in vivo. These results may have implications for clinical decision-making and prospective trial design. PMID:23762417

A Proposed Maneuver to Guide Transseptal Puncture Using Real-Time Three-Dimensional Transesophageal Echocardiography: Pilot Study.

PubMed

Mahmoud, Hani M; Al-Ghamdi, Mohammed A; Ghabashi, Abdullah E; Anwar, Ashraf M

2015-01-01

Aim of Study. To assess the feasibility of a new proposed maneuver "RATLe-90" using real-time three-dimensional transesophageal echocardiography (RT-3DTEE) for anatomically oriented visualization of the interatrial septum (IAS) in guiding the transseptal puncture TSP. Methods. The study included 20 patients (mean age, 60.2 ± 6.7 years; 60% males) who underwent TSP for different indications. RT-3DTEE was used to guide TSP. The proposed maneuver RATLe-90 (Rotate-Anticlockwise-Tilt-Left-90) was applied in all cases to have the anatomically oriented en face view of the IAS from the right atrial (RA) aspect. Having this anatomically oriented view, we guided the TSP catheter towards the proper puncture site according to the planned procedure. Results. Using the RATLe-90 maneuver, the anatomically oriented en face view of the IAS from the RA was obtained in all patients. We were able to guide the puncture catheter to the proper puncture site on the IAS. The 3D images obtained were clearly understood by both echocardiographers and interventionists. The RATLe-90 maneuver acquisition time was 19.9 ± 1.6 seconds. The time-to-tent was 64.8 ± 16.3 seconds. Less TEE probe manipulations were needed while guiding the TSP. Conclusions. Application of RT3D-TEE during TSP using RATLe-90 maneuver is feasible with shorter fluoroscopy time and minimizing TEE probe manipulations.

Wide field-of-view dual-band multispectral muzzle flash detection

NASA Astrophysics Data System (ADS)

Montoya, J.; Melchor, J.; Spiliotis, P.; Taplin, L.

2013-06-01

Sensor technologies are undergoing revolutionary advances, as seen in the rapid growth of multispectral methodologies. Increases in spatial, spectral, and temporal resolution, and in breadth of spectral coverage, render feasible sensors that function with unprecedented performance. A system was developed that addresses many of the key hardware requirements for a practical dual-band multispectral acquisition system, including wide field of view and spectral/temporal shift between dual bands. The system was designed using a novel dichroic beam splitter and dual band-pass filter configuration that creates two side-by-side images of a scene on a single sensor. A high-speed CMOS sensor was used to simultaneously capture data from the entire scene in both spectral bands using a short focal-length lens that provided a wide field-of-view. The beam-splitter components were arranged such that the two images were maintained in optical alignment and real-time intra-band processing could be carried out using only simple arithmetic on the image halves. An experiment related to limitations of the system to address multispectral detection requirements was performed. This characterized the system's low spectral variation across its wide field of view. This paper provides lessons learned on the general limitation of key hardware components required for multispectral muzzle flash detection, using the system as a hardware example combined with simulated multispectral muzzle flash and background signatures.

Reflections on Refraction.

ERIC Educational Resources Information Center

Iona, Mario; Beaty, William J.

1988-01-01

Presents two views about lenses and optics in attempt to clarify a story written by Carolyn Hermann, "Through the Magnifying Glass." Cites two references for additional reading on students' optics difficulties. (RT)

Hemispherical-field-of-view, nonimaging narrow-band spectral filter

NASA Technical Reports Server (NTRS)

Miles, R. B.; Webb, S. G.; Griffith, E. L.

1981-01-01

Two compound parabolic concentrators are used to create a 180-deg-field-of-view spectral filter. The collection optics are reflective and are designed to collimate the light through a multilayer interference filter and then to refocus it onto an optical detector. Assuming unit reflectance and no loss through the optical filter, this device operates at the thermodynamic collection limit.

Hemispherical-field-of-view, nonimaging narrow-band spectral filter.

PubMed

Miles, R B; Webb, S G; Griffith, E L

1981-12-01

Two compound parabolic concentrators are used to create a 180 degrees -field-of-view spectral filter. The collection optics are reflective and are designed to collimate the light through a multilayer interference filter and then to refocus it onto an optical detector. Assuming unit reflectance and no loss through the optical filter, this device operates at the thermodynamic collection limit.

Temporal expectation and spectral expectation operate in distinct fashion on neuronal populations.

PubMed

Hsu, Yi-Fang; Hämäläinen, Jarmo A; Waszak, Florian

2013-11-01

The formation of temporal expectation (i.e., the prediction of "when") is of prime importance to sensory processing. It can modulate sensory processing at early processing stages probably via the entrainment of low-frequency neuronal oscillations in the brain. However, sensory predictions involve not only temporal expectation but also spectral expectation (i.e., the prediction of "what"). Here we investigated how temporal expectation may interrelate with spectral expectation by explicitly setting up temporal expectation and spectral expectation in a target detection task. We found that reaction time (RT) was shorter when targets were temporally expected than when they were temporally unexpected. The temporal expectation effect was larger with than without spectral expectation. However, this interaction in the behavioural data did not result from an interaction in the electroencephalography (EEG), where we observed independent main effects of temporal expectation and spectral expectation. More precisely, we found that the N1 and P2 event-related potential (ERP) components and the entrainment of low-frequency neuronal oscillations were exclusively modulated by temporal expectation, whilst only the P3 ERP component was modulated by spectral expectation. Our results, thus, support the idea that temporal expectation and spectral expectation operate in distinct fashion on neuronal populations. © 2013 Elsevier Ltd. All rights reserved.

Multi-phenology WorldView-2 imagery improves remote sensing of savannah tree species

NASA Astrophysics Data System (ADS)

Madonsela, Sabelo; Cho, Moses Azong; Mathieu, Renaud; Mutanga, Onisimo; Ramoelo, Abel; Kaszta, Żaneta; Kerchove, Ruben Van De; Wolff, Eléonore

2017-06-01

Biodiversity mapping in African savannah is important for monitoring changes and ensuring sustainable use of ecosystem resources. Biodiversity mapping can benefit from multi-spectral instruments such as WorldView-2 with very high spatial resolution and a spectral configuration encompassing important spectral regions not previously available for vegetation mapping. This study investigated i) the benefits of the eight-band WorldView-2 (WV-2) spectral configuration for discriminating tree species in Southern African savannah and ii) if multiple-images acquired at key points of the typical phenological development of savannahs (peak productivity, transition to senescence) improve on tree species classifications. We first assessed the discriminatory power of WV-2 bands using interspecies-Spectral Angle Mapper (SAM) via Band Add-On procedure and tested the spectral capability of WorldView-2 against simulated IKONOS for tree species classification. The results from interspecies-SAM procedure identified the yellow and red bands as the most statistically significant bands (p = 0.000251 and p = 0.000039 respectively) in the discriminatory power of WV-2 during the transition from wet to dry season (April). Using Random Forest classifier, the classification scenarios investigated showed that i) the 8-bands of the WV-2 sensor achieved higher classification accuracy for the April date (transition from wet to dry season, senescence) compared to the March date (peak productivity season) ii) the WV-2 spectral configuration systematically outperformed the IKONOS sensor spectral configuration and iii) the multi-temporal approach (March and April combined) improved the discrimination of tress species and produced the highest overall accuracy results at 80.4%. Consistent with the interspecies-SAM procedure, the yellow (605 nm) band also showed a statistically significant contribution in the improved classification accuracy from WV-2. These results highlight the mapping opportunities presented by WV-2 data for monitoring the distribution status of e.g. species often harvested by local communities (e.g. Sclerocharya birrea), encroaching species, or species-specific tree losses induced by elephants.

Utilizing Response to Intervention (RtI) as a Means of Studying Capacity Building and Motivation of Staff by School Leadership Teams

ERIC Educational Resources Information Center

Mahoney, Brian J.

2013-01-01

This research study explored the concept of capacity building and motivation of staff by school leadership teams in the successful development and implementation of educational initiatives, specifically Response to Intervention (RtI). A great deal of scholarship has addressed leadership and its effect on motivation, but few studies have…

Evaluation of a sensitive reverse transcription PCR-enzymelinked immunosorbent assay for detection of hepatitis A virus in oysters (Saccostrea glomerata) on the east coast of the Gulf of Thailand.

PubMed

Intamaso, Uraiwan; Ketkhunthod, Sitthisak

2014-05-01

Hepatitis A virus (HAV) contamination in food can lead to major health problems. We developed a combination reverse transcription (RT) PCR method plus enzyme-linked immunosorbent assay (ELISA) to detect HAV in fresh oysters harvested along the east coast of the Gulf of Thailand. Viral nucleic acid was extracted via the glycine-arginine-polyethylene glycol method followed by RT-PCR amplification with specifically designed primers against HAV and an ELISA to detect the digoxigenin-labeled RT-PCR products. The ELISA in concert with the RT-PCR protocol further increased the detection sensitivity by 100-fold for the HAV genome and 10-fold in artificially contaminated oysters. The overall sensitivity of the RT-PCR in combination with the ELISA was 31.88 pg and 16 PFU/g, respectively. The ELISA increases the specificity of the RT-PCR assay for detecting naturally occurring HAV in oysters. This combined RT-PCR-ELISA approach is a practical and sensitive method for HAV detection and can be utilized in routine screening for HAV in shellfish.

Advanced ECCD based NTM control in closed-loop operation at ASDEX Upgrade (AUG)

NASA Astrophysics Data System (ADS)

Reich, Matthias; Barrera-Orte, Laura; Behler, Karl; Bock, Alexander; Giannone, Louis; Maraschek, Marc; Poli, Emanuele; Rapson, Chris; Stober, Jörg; Treutterer, Wolfgang

2012-10-01

In high performance plasmas, Neoclassical Tearing Modes (NTMs) are regularly observed at reactor-grade beta-values. They limit the achievable normalized beta, which is undesirable because fusion performance scales as beta squared. The method of choice for controlling and avoiding NTMs at AUG is the deposition of ECCD inside the magnetic island for stabilization in real-time (rt). Our approach to tackling such complex control problems using real-time diagnostics allows rigorous optimization of all subsystems. Recent progress in rt-equilibrium reconstruction (< 3.5 ms), rt-localization of NTMs (< 8 ms) and rt beam tracing (< 25 ms) allows closed-loop feedback operation using multiple movable mirrors as the ECCD deposition actuator. The rt-equilibrium uses function parametrization or a fast Grad-Shafranov solver with an option to include rt-MSE measurements. The island localization is based on a correlation of ECE and filtered Mirnov signals. The rt beam-tracing module provides deposition locations and their derivative versus actuator position of multiple gyrotrons. The ``MHD controller'' finally drives the actuators. Results utilizing closed-loop operation with multiple gyrotrons and their effect on NTMs are shown.

A Compact, Multi-view Net Flux Radiometer for Future Uranus and Neptune Probes

NASA Technical Reports Server (NTRS)

Aslam, S.; Amato, M.; Atkinson, D. H.; Hewagama, T.; Jennings, D. E.; Nixon, C. A.; Mousis, O.

2017-01-01

A Net Flux Radiometer (NFR) is presented that can be included in an atmospheric structure instrument suite for future probe missions to the icy giants Uranus and Neptune. The baseline design has two spectral channels i.e., a solar channel (0.4-to-3.5 m) and a thermal channel (4-to-300 m). The NFR is capable of viewing five distinct viewing angles during the descent. Non-imaging Winston cones with band-pass filters are used for each spectral channel and to define a 5 angular acceptance. Uncooled thermopile detectors are used in each spectral channel and are read out using a custom radiation hard application specific integrated circuit (ASIC). The baseline design can easily be changed to increase the number of detector channels from two to seven.

Distribution of CO2 in Saturn's Atmosphere from Cassini/cirs Infrared Observations

NASA Astrophysics Data System (ADS)

Abbas, M. M.; LeClair, A.; Woodard, E.; Young, M.; Stanbro, M.; Flasar, F. M.; Kunde, V. G.; Achterberg, R. K.; Bjoraker, G.; Brasunas, J.; Jennings, D. E.; the Cassini/CIRS Team

2013-10-01

This paper focuses on the CO2 distribution in Saturn's atmosphere based on analysis of infrared spectral observations of Saturn made by the Composite Infrared Spectrometer aboard the Cassini spacecraft. The Cassini spacecraft was launched in 1997 October, inserted in Saturn's orbit in 2004 July, and has been successfully making infrared observations of Saturn, its rings, Titan, and other icy satellites during well-planned orbital tours. The infrared observations, made with a dual Fourier transform spectrometer in both nadir- and limb-viewing modes, cover spectral regions of 10-1400 cm-1, with the option of variable apodized spectral resolutions from 0.53 to 15 cm-1. An analysis of the observed spectra with well-developed radiative transfer models and spectral inversion techniques has the potential to provide knowledge of Saturn's thermal structure and composition with global distributions of a series of gases. In this paper, we present an analysis of a large observational data set for retrieval of Saturn's CO2 distribution utilizing spectral features of CO2 in the Q-branch of the ν2 band, and discuss its possible relationship to the influx of interstellar dust grains. With limited spectral regions available for analysis, due to low densities of CO2 and interference from other gases, the retrieved CO2 profile is obtained as a function of a model photochemical profile, with the retrieved values at atmospheric pressures in the region of ~1-10 mbar levels. The retrieved CO2 profile is found to be in good agreement with the model profile based on Infrared Space Observatory measurements with mixing ratios of ~4.9 × 10-10 at atmospheric pressures of ~1 mbar.

Use of NASA Near Real-Time and Archived Satellite Data to Support Disaster Assessment

NASA Technical Reports Server (NTRS)

McGrath, Kevin M.; Molthan, Andrew L.; Burks, Jason E.

2014-01-01

NASA's Short-term Prediction Research and Transition (SPoRT) Center partners with the NWS to provide near realtime data in support of a variety of weather applications, including disasters. SPoRT supports NASA's Applied Sciences Program: Disasters focus area by developing techniques that will aid the disaster monitoring, response, and assessment communities. SPoRT has explored a variety of techniques for utilizing archived and near real-time NASA satellite data. An increasing number of end-users - such as the NWS Damage Assessment Toolkit (DAT) - access geospatial data via a Web Mapping Service (WMS). SPoRT has begun developing open-standard Geographic Information Systems (GIS) data sets via WMS to respond to end-user needs.

Mercator Projection of Huygens View

NASA Image and Video Library

2006-05-04

This poster shows a flattened (Mercator) projection of the Huygens probe's view from 10 kilometers altitude (6 miles). The images that make up this view were taken on Jan. 14, 2005, with the descent imager/spectral radiometer onboard the European Space Agency's Huygens probe. The Huygens probe was delivered to Saturn's moon Titan by the Cassini spacecraft, which is managed by NASA's Jet Propulsion Laboratory, Pasadena, Calif. NASA supplied two instruments on the probe, the descent imager/spectral radiometer and the gas chromatograph mass spectrometer. http://photojournal.jpl.nasa.gov/catalog/PIA08113

Analytical design of a hyper-spectral imaging spectrometer utilizing a convex grating

NASA Astrophysics Data System (ADS)

Kim, Seo H.; Kong, Hong J.; Ku, Hana; Lee, Jun H.

2012-09-01

This paper describes about the new design method for hyper-spectral Imaging spectrometers utilizing convex grating. Hyper-spectral imaging systems are power tools in the field of remote sensing. HSI systems collect at least 100 spectral bands of 10~20 nm width. Because the spectral signature is different and induced unique for each material, it should be possible to discriminate between one material and another based on difference in spectral signature of material. I mathematically analyzed parameters for the intellectual initial design. Main concept of this is the derivative of "ring of minimum aberration without vignetting". This work is a kind of analytical design of an Offner imaging spectrometer. Also, several experiment methods will be contrived to evaluate the performance of imaging spectrometer.

Measurement of high-temperature spectral emissivity using integral blackbody approach

NASA Astrophysics Data System (ADS)

Pan, Yijie; Dong, Wei; Lin, Hong; Yuan, Zundong; Bloembergen, Pieter

2016-11-01

Spectral emissivity is one of the most critical thermophysical properties of a material for heat design and analysis. Especially in the traditional radiation thermometry, normal spectral emissivity is very important. We developed a prototype instrument based upon an integral blackbody method to measure material's spectral emissivity at elevated temperatures. An optimized commercial variable-high-temperature blackbody, a high speed linear actuator, a linear pyrometer, and an in-house designed synchronization circuit was used to implemented the system. A sample was placed in a crucible at the bottom of the blackbody furnace, by which the sample and the tube formed a simulated reference blackbody which had an effective total emissivity greater than 0.985. During the measurement, a pneumatic cylinder pushed a graphite rode and then the sample crucible to the cold opening within hundreds of microseconds. The linear pyrometer was used to monitor the brightness temperature of the sample surface, and the corresponding opto-converted voltage was fed and recorded by a digital multimeter. To evaluate the temperature drop of the sample along the pushing process, a physical model was proposed. The tube was discretized into several isothermal cylindrical rings, and the temperature of each ring was measurement. View factors between sample and rings were utilized. Then, the actual surface temperature of the sample at the end opening was obtained. Taking advantages of the above measured voltage signal and the calculated actual temperature, normal spectral emissivity under the that temperature point was obtained. Graphite sample at 1300°C was measured to prove the validity of the method.

Patient views and correlates of radiotherapy omission in a population-based sample of older women with favorable-prognosis breast cancer.

PubMed

Shumway, Dean A; Griffith, Kent A; Hawley, Sarah T; Wallner, Lauren P; Ward, Kevin C; Hamilton, Ann S; Morrow, Monica; Katz, Steven J; Jagsi, Reshma

2018-04-18

The omission of radiotherapy (RT) after lumpectomy is a reasonable option for many older women with favorable-prognosis breast cancer. In the current study, we sought to evaluate patient perspectives regarding decision making about RT. Women aged 65 to 79 years with AJCC 7th edition stage I and II breast cancer who were reported to the Georgia and Los Angeles County Surveillance, Epidemiology, and End Results registries were surveyed (response rate, 70%) regarding RT decisions, the rationale for omitting RT, decision-making values, and understanding of disease recurrence risk. We also surveyed their corresponding surgeons (response rate, 77%). Patient characteristics associated with the omission of RT were evaluated using multilevel, multivariable logistic regression, accounting for patient clustering within surgeons. Of 999 patients, 135 omitted RT (14%). Older age, lower tumor grade, and having estrogen receptor-positive disease each were found to be strongly associated with omission of RT in multivariable analyses, whereas the number of comorbidities was not. Non-English speakers were more likely to omit RT (adjusted odds ratio, 5.9; 95% confidence interval, 1.4-24.5). The most commonly reported reasons for RT omission were that a physician advised the patient that it was not needed (54% of patients who omitted RT) and patient choice (41%). Risk of local disease recurrence was overestimated by all patients: by approximately 2-fold among those who omitted RT and by approximately 8-fold among those who received RT. The risk of distant disease recurrence was overestimated by approximately 3-fold on average. To some extent, decisions regarding RT omission are appropriately influenced by patient age, tumor grade, and estrogen receptor status, but do not appear to be optimally tailored according to competing comorbidities. Many women who are candidates for RT omission overestimate their risk of disease recurrence. Cancer 2018. © 2018 American Cancer Society. © 2018 American Cancer Society.

Information content of IRIS spectra. [from Nimbus 4 satellite

NASA Technical Reports Server (NTRS)

Price, J. C.

1974-01-01

Spectra from the satellite instrument IRIS (infra red interferometer spectrometer) were examined to find the number of independent variables needed to describe these broadband high spectral resolution data. The radiated power in the atmospheric window from 771 to 981/cm was the first parameter chosen for fitting observed spectra. At succeeding levels of analysis the residual variability (observed spectrum - best fit spectrum) in an ensemble of observations was partioned into spectral eigenvectors. The eigenvector describing the largest fraction of this variability was examined for a strong spectral signature; the power in the corresponding spectral band was then used as the next fitting parameter. The measured power in nine spectral intervals, when inserted in the spectral fitting functions, was adequate to describe most spectra to within the noise level of IRIS. Considerations of relative signal strength and scales of atmospheric variability suggest a combination sounder (multichannel-broad field of view) scanner (window channel-small field of view) as an efficient observing instrument.

Information content in Iris spectra. [Infrared Interferometer Spectrometer of Nimbus 4 satellite

NASA Technical Reports Server (NTRS)

Price, J. C.

1975-01-01

Spectra from the satellite instrument Iris (infrared interferometer spectrometer) were examined to find the number of independent variables needed to describe the broad-band high-resolution spectral data. The radiated power in the atmospheric window from 771 to 981 per cm was the first parameter chosen for fitting observed spectra. At succeeding levels of analysis, the residual variability (observed spectrum minus best-fit spectrum) in an ensemble of observations was partitioned into spectral eigenvectors. The eigenvector describing the largest fraction of this variability was examined for a strong spectral signature; the power in the corresponding spectral band was then used as the next fitting parameter. The measured power in nine spectral intervals, when it was inserted in the spectral-fitting functions, was adequate to describe most spectra to within the noise level of Iris. Considerations of relative signal strength and scales of atmospheric variability suggest a combination sounder (multichannel, broad field of view) scanner (window channel, small field of view) as an efficient observing instrument.

Beyond Low-Rank Representations: Orthogonal clustering basis reconstruction with optimized graph structure for multi-view spectral clustering.

PubMed

Wang, Yang; Wu, Lin

2018-07-01

Low-Rank Representation (LRR) is arguably one of the most powerful paradigms for Multi-view spectral clustering, which elegantly encodes the multi-view local graph/manifold structures into an intrinsic low-rank self-expressive data similarity embedded in high-dimensional space, to yield a better graph partition than their single-view counterparts. In this paper we revisit it with a fundamentally different perspective by discovering LRR as essentially a latent clustered orthogonal projection based representation winged with an optimized local graph structure for spectral clustering; each column of the representation is fundamentally a cluster basis orthogonal to others to indicate its members, which intuitively projects the view-specific feature representation to be the one spanned by all orthogonal basis to characterize the cluster structures. Upon this finding, we propose our technique with the following: (1) We decompose LRR into latent clustered orthogonal representation via low-rank matrix factorization, to encode the more flexible cluster structures than LRR over primal data objects; (2) We convert the problem of LRR into that of simultaneously learning orthogonal clustered representation and optimized local graph structure for each view; (3) The learned orthogonal clustered representations and local graph structures enjoy the same magnitude for multi-view, so that the ideal multi-view consensus can be readily achieved. The experiments over multi-view datasets validate its superiority, especially over recent state-of-the-art LRR models. Copyright © 2018 Elsevier Ltd. All rights reserved.

Building Level Principals as Change Agents in a Response to Intervention Reform Initiative

ERIC Educational Resources Information Center

Ninni, Kristen

2010-01-01

The purpose of this study was to examine the role of the principal in a systems change effort. Utilizing Response to Intervention (RtI) as a means of studying principals as change agents, this researcher examined the principals' ability to implement and sustain a reform effort such as RtI as perceived by the principal, problem solving team, and…

Thermal Infrared Spectroscopy from Mars Landers and Rovers: A New Angle on Remote Sensing

NASA Technical Reports Server (NTRS)

Moersch, J.; Horton, K.; Lucey, P.; Roush, T.; Ruff, S.; Smith, M.

1999-01-01

The MINUTES instrument of the Athena Precursor Experiment (APEX) on the Mars Surveyor 2001 lander mission will perform the first thermal infrared remote sensing observations from the surface of another planet. Experience gained from this experiment will be used to guide observations from identical instruments mounted on the Athena rovers, to be launched in 2003 and 2005. The utility of infrared spectrometers in determining the mineralogic composition of geologic surfaces from airborne and spaceborne platforms has been amply demonstrated. However, relatively little experience exists in using functionally similar instruments on the ground in the context of planetary science. What work has been done on this problem has mostly utilized field spectrometers that are designed to look down on nearby target rocks. While many Mini-TES observations will be made with this type of geometry, it is likely that other observations will be made looking horizontally at the more vertically-oriented facets of rock targets, to avoid spectral contamination from dust mantles. On rover missions, the Mini-TES may also be pointed horizontally at rocks several meters away, to determine if they are worthy of approaching for in situ observations and possible sample cacheing. While these observations will undoubtedly prove useful, there are important, and perhaps unappreciated, differences between horizontal-viewing, surface-based spectroscopy and the more traditional nadir-viewing, orbit or aircraft-based observations. Plans also exist to step the Mini-TES in a rastering motion to build hyperspectral scenes. Horizontal viewing hyperspectral cubes also possess unique qualities that call for innovative analysis techniques. The effect of viewing geometry: In thermal emission spectroscopy, regardless of whether an instrument is looking down on or horizontally at a target, the same basic equation governs the radiance reaching the sensor .

Dual-telescope multi-channel thermal-infrared radiometer for outer planet fly-by missions

NASA Astrophysics Data System (ADS)

Aslam, Shahid; Amato, Michael; Bowles, Neil; Calcutt, Simon; Hewagama, Tilak; Howard, Joseph; Howett, Carly; Hsieh, Wen-Ting; Hurford, Terry; Hurley, Jane; Irwin, Patrick; Jennings, Donald E.; Kessler, Ernst; Lakew, Brook; Loeffler, Mark; Mellon, Michael; Nicoletti, Anthony; Nixon, Conor A.; Putzig, Nathaniel; Quilligan, Gerard; Rathbun, Julie; Segura, Marcia; Spencer, John; Spitale, Joseph; West, Garrett

2016-11-01

The design of a versatile dual-telescope thermal-infrared radiometer spanning the spectral wavelength range 8-200 μm, in five spectral pass bands, for outer planet fly-by missions is described. The dual-telescope design switches between a narrow-field-of-view and a wide-field-of-view to provide optimal spatial resolution images within a range of spacecraft encounters to the target. The switchable dual-field-of-view system uses an optical configuration based on the axial rotation of a source-select mirror along the optical axis. The optical design, spectral performance, radiometric accuracy, and retrieval estimates of the instrument are discussed. This is followed by an assessment of the surface coverage performance at various spatial resolutions by using the planned NASA Europa Mission 13-F7 fly-by trajectories as a case study.

Objective for monitoring the corona discharge

NASA Astrophysics Data System (ADS)

Obrezkov, Andrey; Rodionov, Andrey Yu.; Pisarev, Viktor N.; Chivanov, Alexsey N.; Baranov, Yuri P.; Korotaev, Valery V.

2016-04-01

Remote optoelectronic probing is one of the most actual aspects of overhead electric line maintenances. By installing such systems on a helicopter (for example) it becomes possible to monitor overhead transmission line status and to search damaged parts of the lines. Thermal and UV-cameras are used for more effective diagnostic. UV-systems are fitted with filters, that attenuate visible spectrum, which is an undesired type of signal. Also these systems have a wide view angle for better view and proper diagnostics. For even more effectiveness, it is better to use several spectral channels: like UV and IR. Such spectral selection provides good noise reduction. Experimental results of spectral parameters of the wide view angle multispectral objective for such systems are provided in this report. There is also data on point spread function, UV and IR scattering index data and technical requirements for detectors.

Dual-Telescope Multi-Channel Thermal-Infrared Radiometer for Outer Planet Fly-By Missions

NASA Technical Reports Server (NTRS)

Aslam, Shahid; Amato, Michael; Bowles, Neil; Calcutt, Simon; Hewagama, Tilak; Howard, Joseph; Howett, Carly; Hsieh, Wen-Ting; Hurford, Terry; Hurley, Jane;

Observational capabilities of solar satellite "Coronas-Photon"

NASA Astrophysics Data System (ADS)

Kotov, Yu.

Coronas-Photon mission is the third satellite of the Russian Coronas program on solar activity observation The main goal of the Coronas-Photon is the study of solar hard electromagnetic radiation in the wide energy range from UV up to high energy gamma-radiation sim 2000MeV Scientific payload for solar radiation observation consists of three type of instruments 1 monitors Natalya-2M Konus-RF RT-2 Penguin-M BRM Phoka Sphin-X Sokol for spectral and timing measurements of full solar disk radiation with timing in flare burst mode up to one msec Instruments Natalya-2M Konus-RF RT-2 will cover the wide energy range of hard X-rays and soft Gamma rays 15keV to 2000MeV and will together constitute the largest area detectors ever used for solar observations Detectors of gamma-ray monitors are based on structured inorganic scintillators with energy resolution sim 5 for nuclear gamma-line band to 35 for GeV-band PSD analysis is used for gamma neutron separation for solar neutron registration T 30MeV Penguin-M has capability to measure linear polarization of hard X-rays using azimuth are measured by Compton scattering asymmetry in case of polarization of an incident flux For X-ray and EUV monitors the scintillation phoswich detectors gas proportional counter CZT assembly and Filter-covered Si-diodes are used 2 Telescope-spectrometer TESIS for imaging solar spectroscopy in X-rays with angular resolution up to 1 in three spectral lines and RT-2 CZT assembly of CZT

Statistically Optimized Inversion Algorithm for Enhanced Retrieval of Aerosol Properties from Spectral Multi-Angle Polarimetric Satellite Observations

NASA Technical Reports Server (NTRS)

Dubovik, O; Herman, M.; Holdak, A.; Lapyonok, T.; Taure, D.; Deuze, J. L.; Ducos, F.; Sinyuk, A.

2011-01-01

The proposed development is an attempt to enhance aerosol retrieval by emphasizing statistical optimization in inversion of advanced satellite observations. This optimization concept improves retrieval accuracy relying on the knowledge of measurement error distribution. Efficient application of such optimization requires pronounced data redundancy (excess of the measurements number over number of unknowns) that is not common in satellite observations. The POLDER imager on board the PARASOL microsatellite registers spectral polarimetric characteristics of the reflected atmospheric radiation at up to 16 viewing directions over each observed pixel. The completeness of such observations is notably higher than for most currently operating passive satellite aerosol sensors. This provides an opportunity for profound utilization of statistical optimization principles in satellite data inversion. The proposed retrieval scheme is designed as statistically optimized multi-variable fitting of all available angular observations obtained by the POLDER sensor in the window spectral channels where absorption by gas is minimal. The total number of such observations by PARASOL always exceeds a hundred over each pixel and the statistical optimization concept promises to be efficient even if the algorithm retrieves several tens of aerosol parameters. Based on this idea, the proposed algorithm uses a large number of unknowns and is aimed at retrieval of extended set of parameters affecting measured radiation.

Assessing the Utility of 3-km Land Information System Soil Moisture Data for Drought Monitoring and Hydrologic Applications

NASA Technical Reports Server (NTRS)

White, Kristopher D.; Case, Jonathan L.

2014-01-01

The NASA Short term Prediction Research and Transition (SPoRT) Center in Huntsville, AL has been running a real-time configuration of the Noah land surface model within the NASA Land Information System (LIS) since June 2010. The SPoRT LIS version is run as a stand-alone land surface model over a Southeast Continental U.S. domain with 3-km grid spacing. The LIS contains output variables including soil moisture and temperature at various depths, skin temperature, surface heat fluxes, storm surface runoff, and green vegetation fraction (GVF). The GVF represents another real-time SPoRT product, which is derived from the Moderate Resolution Imaging Spectroradiometer instrument aboard NASA's Aqua and Terra satellites. These data have demonstrated operational utility for drought monitoring and hydrologic applications at the National Weather Service (NWS) office in Huntsville, AL since early 2011. The most relevant data for these applications have proven to be the moisture availability (%) in the 0-10 cm and 0-200 cm layers, and the volumetric soil moisture (%) in the 0-10 cm layer. In an effort to better understand their applicability among locations with different terrain, soil and vegetation types, SPoRT is conducting the first formal assessment of these data at NWS offices in Houston, TX, Huntsville, AL and Raleigh, NC during summer 2014. The goal of this assessment is to evaluate the LIS output in the context of assessing flood risk and determining drought designations for the U.S. Drought Monitor. Forecasters will provide formal feedback via a survey question web portal, in addition to the NASA SPoRT blog. In this presentation, the SPoRT LIS and its applications at NWS offices will be presented, along with information about the summer assessment, including training module development and preliminary results.

SHERMAN - A shape-based thermophysical model II. Application to 8567 (1996 HW1)

NASA Astrophysics Data System (ADS)

Howell, E. S.; Magri, C.; Vervack, R. J.; Nolan, M. C.; Taylor, P. A.; Fernández, Y. R.; Hicks, M. D.; Somers, J. M.; Lawrence, K. J.; Rivkin, A. S.; Marshall, S. E.; Crowell, J. L.

2018-03-01

We apply a new shape-based thermophysical model, SHERMAN, to the near-Earth asteroid (NEA) 8567 (1996 HW1) to derive surface properties. We use the detailed shape model of Magri et al. (2011) for this contact binary NEA to analyze spectral observations (2-4.1 microns) obtained at the NASA IRTF on several different dates to find thermal parameters that match all the data. Visible and near-infrared (0.8-2.5 microns) spectral observations are also utilized in a self-consistent way. We find that an average visible albedo of 0.33, thermal inertia of 70 (SI units) and surface roughness of 50% closely match the observations. The shape and orientation of the asteroid is very important to constrain the thermal parameters to be consistent with all the observations. Multiple viewing geometries are equally important to achieve a robust solution for small, non-spherical NEAs. We separate the infrared beaming effects of shape, viewing geometry and surface roughness for this asteroid and show how their effects combine. We compare the diameter and albedo that would be derived from the thermal observations assuming a spherical shape with those from the shape-based model. We also discuss how observations from limited viewing geometries compare to the solution from multiple observations. The size that would be derived from the individual observation dates varies by 20% from the best-fit solution, and can be either larger or smaller. If the surface properties are not homogeneous, many solutions are possible, but the average properties derived here are very tightly constrained by the multiple observations, and give important insights into the nature of small NEAs.

Driving with indirect viewing sensors: understanding the visual perception issues

NASA Astrophysics Data System (ADS)

O'Kane, Barbara L.

1996-05-01

Visual perception is one of the most important elements of driving in that it enables the driver to understand and react appropriately to the situation along the path of the vehicle. The visual perception of the driver is enabled to the greatest extent while driving during the day. Noticeable decrements in visual acuity, range of vision, depth of field and color perception occur at night and under certain weather conditions. Indirect viewing sensors, utilizing various technologies and spectral bands, may assist the driver's normal mode of driving. Critical applications in the military as well as other official activities may require driving at night without headlights. In these latter cases, it is critical that the device, being the only source of scene information, provide the required scene cues needed for driving on, and often-times, off road. One can speculate about the scene information that a driver needs, such as road edges, terrain orientation, people and object detection in or near the path of the vehicle, and so on. But the perceptual qualities of the scene that give rise to these perceptions are little known and thus not quantified for evaluation of indirect viewing devices. This paper discusses driving with headlights and compares the scene content with that provided by a thermal system in the 8 - 12 micrometers micron spectral band, which may be used for driving at some time. The benefits and advantages of each are discussed as well as their limitations in providing information useful for the driver who must make rapid and critical decisions based upon the scene content available. General recommendations are made for potential avenues of development to overcome some of these limitations.

Biology: A Hypothetico-Deductive Science.

ERIC Educational Resources Information Center

Lewis, Ralph W.

1988-01-01

Examines the change and general view of methods in biological science and the possible consequences for biology education. States that the transition was from descriptive biology to theoretical biology. Lists the postulates of some theories. (RT)

The Amateur Scientist.

ERIC Educational Resources Information Center

Walker, Jearl

1989-01-01

Describes a method for making holograms viewable in white light without the problem of vibrations. Presents diagrams which show the arrangement for construction, viewing procedures, and a device for generating holograms. A list of supplies is included. (RT)

Consistent multiphysics simulation of a central tower CSP plant as applied to ISTORE

NASA Astrophysics Data System (ADS)

Votyakov, Evgeny V.; Papanicolas, Costas N.

2017-06-01

We present a unified consistent multiphysics approach to model a central tower CSP plant. The framework for the model includes Monte Carlo ray tracing (RT) and computational fluid dynamics (CFD) components utilizing the OpenFOAM C++ software library. The RT part works effectively with complex surfaces of engineering design given in CAD formats. The CFD simulation, which is based on 3D Navier-Stokes equations, takes into account all possible heat transfer mechanisms: radiation, conduction, and convection. Utilizing this package, the solar field of the experimental Platform for Research, Observation, and TEchnological Applications in Solar Energy (PROTEAS) and the Integrated STOrage and Receiver (ISTORE), developed at the Cyprus Institute, are being examined.

Estimation of canopy carotenoid content of winter wheat using multi-angle hyperspectral data

NASA Astrophysics Data System (ADS)

Kong, Weiping; Huang, Wenjiang; Liu, Jiangui; Chen, Pengfei; Qin, Qiming; Ye, Huichun; Peng, Dailiang; Dong, Yingying; Mortimer, A. Hugh

2017-11-01

Precise estimation of carotenoid (Car) content in crops, using remote sensing data, could be helpful for agricultural resources management. Conventional methods for Car content estimation were mostly based on reflectance data acquired from nadir direction. However, reflectance acquired at this direction is highly influenced by canopy structure and soil background reflectance. Off-nadir observation is less impacted, and multi-angle viewing data are proven to contain additional information rarely exploited for crop Car content estimation. The objective of this study was to explore the potential of multi-angle observation data for winter wheat canopy Car content estimation. Canopy spectral reflectance was measured from nadir as well as from a series of off-nadir directions during different growing stages of winter wheat, with concurrent canopy Car content measurements. Correlation analyses were performed between Car content and the original and continuum removed spectral reflectance. Spectral features and previously published indices were derived from data obtained at different viewing angles and were tested for Car content estimation. Results showed that spectral features and indices obtained from backscattering directions between 20° and 40° view zenith angle had a stronger correlation with Car content than that from the nadir direction, and the strongest correlation was observed from about 30° backscattering direction. Spectral absorption depth at 500 nm derived from spectral data obtained from 30° backscattering direction was found to reduce the difference induced by plant cultivars greatly. It was the most suitable for winter wheat canopy Car estimation, with a coefficient of determination 0.79 and a root mean square error of 19.03 mg/m2. This work indicates the importance of taking viewing geometry effect into account when using spectral features/indices and provides new insight in the application of multi-angle remote sensing for the estimation of crop physiology.

Two Titans

NASA Image and Video Library

2017-08-11

These two views of Saturn's moon Titan exemplify how NASA's Cassini spacecraft has revealed the surface of this fascinating world. Cassini carried several instruments to pierce the veil of hydrocarbon haze that enshrouds Titan. The mission's imaging cameras also have several spectral filters sensitive to specific wavelengths of infrared light that are able to make it through the haze to the surface and back into space. These "spectral windows" have enable the imaging cameras to map nearly the entire surface of Titan. In addition to Titan's surface, images from both the imaging cameras and VIMS have provided windows into the moon's ever-changing atmosphere, chronicling the appearance and movement of hazes and clouds over the years. A large, bright and feathery band of summer clouds can be seen arcing across high northern latitudes in the view at right. These views were obtained with the Cassini spacecraft narrow-angle camera on March 21, 2017. Images taken using red, green and blue spectral filters were combined to create the natural-color view at left. The false-color view at right was made by substituting an infrared image (centered at 938 nanometers) for the red color channel. The views were acquired at a distance of approximately 613,000 miles (986,000 kilometers) from Titan. Image scale is about 4 miles (6 kilometers) per pixel. https://photojournal.jpl.nasa.gov/catalog/PIA21624

Spatial location in brief, free-viewing face encoding modulates contextual face recognition

PubMed Central

Felisberti, Fatima M.; McDermott, Mark R.

2013-01-01

The effect of the spatial location of faces in the visual field during brief, free-viewing encoding in subsequent face recognition is not known. This study addressed this question by tagging three groups of faces with cheating, cooperating or neutral behaviours and presenting them for encoding in two visual hemifields (upper vs. lower or left vs. right). Participants then had to indicate if a centrally presented face had been seen before or not. Head and eye movements were free in all phases. Findings showed that the overall recognition of cooperators was significantly better than cheaters, and it was better for faces encoded in the upper hemifield than in the lower hemifield, both in terms of a higher d′ and faster reaction time (RT). The d′ for any given behaviour in the left and right hemifields was similar. The RT in the left hemifield did not vary with tagged behaviour, whereas the RT in the right hemifield was longer for cheaters than for cooperators. The results showed that memory biases in contextual face recognition were modulated by the spatial location of briefly encoded faces and are discussed in terms of scanning reading habits, top-left bias in lighting preference and peripersonal space. PMID:24349694

Quantitative lithologic mapping in spectral ratio feature space - Volcanic, sedimentary and metamorphic terrains

NASA Technical Reports Server (NTRS)

Campos-Marquetti, Raul, Jr.; Rockwell, Barnaby

1990-01-01

The nature of spectral lithologic mapping is studied utilizing ratios centered around the wavelength means of TM imagery. Laboratory-derived spectra are analyzed to determine the two-dimensional relationships and distributions visible in spectral ratio feature space. The spectral distributions of various rocks and minerals in ratio feature space are found to be controlled by several spectrally dominant molecules. Three study areas were examined: Rawhide Mining District, Nevada; Manzano Mountains, New Mexico; and the Sevilleta Long Term Ecological Research site in New Mexico. It is shown that, in the comparison of two ratio plots of laboratory reflectance spectra, i.e., 0.66/0.485 micron versus 1.65/2.22 microns with those derived from TM data, several molecules spectrally dominate the reflectance characteristic of surface lithologic units. Utilizing the above ratio combination, two areas are successfully mapped based on their distribution in spectral ratio feature space.

LADEE UVS (UltraViolet Visible Spectrometer) and the Search for Lunar Exospheric Dust: A Detailed Spectral Analysis

NASA Technical Reports Server (NTRS)

Wooden, Diane H.; Cook, Amanda; Colaprete, Anthony; Shirley, Mark; Vargo, Kara; Elphic, Richard C.; Hermalyn, Brendan; Stubbs, Timothy John; Glenar, David A.

2014-01-01

The Lunar Atmosphere and Dust Environment Explorer (LADEE) executed science observations in lunar orbit spanning 2013-Oct-16- 2014-04-18 UT. LADEE's Ultraviolet/Visible Spectrometer (UVS) studies the composition and temporal variations of the tenuous lunar exosphere and dust environment, utilizing two sets of optics: a limb-viewing telescope, and a solar-viewer. The limb-viewing telescope observes illuminated dust and emitting gas species while the Sun is just behind the lunar limb. The solar viewer, with its diffuser, allows UVS to also stare directly at the solar disk as it approaches the limb, sampling progressively lower exosphere altitudes. Solar viewer "Occultation" activities occur at the lunar sunrise limb, as the LADEE spacecraft passes into the lunar night side, facing the Sun (the spacecraft orbit is near-equatorial retrograde). A loss of transmission of sunlight occurs by the occultation of dust grains along the line-of-sight. So-called "Inertial Limb" activities have the limb-viewing telescope pointed at the lit exosphere just after the Sun has set. Inertial Limb activities follow a similar progression of diminishing sampling altitudes but hold the solar elongation angle constant so the zodiacal light contribution remains constant while seeking to observe the weak lunar horizon glow. On the dark side of the moon, "Sodium Tail" activities pointed the limb-viewing telescope in the direction of the Moon's sodium tail (similar to anti-sunward), during different lunar phases. Of the UVS data sets, these show the largest excess of scattered blue light, indicative of the presence of small (approximately 100 nm) dust grains in the tail. Correlations are sought between dust in the sodium tail and meteor streams and magnetotail crossings to investigate impact- versus electrostatic-lofting. Once lofted, nanoparticles can become charged and picked up by the solar wind. The LADEE UVS Occultation, Inertial Limb, and Sodium Tail spectral datasets provide evidence of a lunar dust exosphere.

Comparison of Sentinel-2A and Landsat-8 Nadir BRDF Adjusted Reflectance (NBAR) over Southern Africa

NASA Astrophysics Data System (ADS)

Li, J.; Roy, D. P.; Zhang, H.

2016-12-01

The Landsat satellites have been providing moderate resolution imagery of the Earth's surface for over 40 years with continuity provided by the Landsat 8 and planned Landsat 9 missions. The European Space Agency Sentinel-2 satellite was successfully launched into a polar sun-synchronous orbit in 2015 and carries the Multi Spectral Instrument (MSI) that has Landsat-like bands and acquisition coverage. These new sensors acquire images at view angles ± 7.5° (Landsat) and ± 10.3° (Sentinel-2) from nadir that result in small directional effects in the surface reflectance. When data from adjoining paths, or from long time series are used, a model of the surface anisotropy is required to adjust observations to a uniform nadir view (primarily for visual consistency, vegetation monitoring, or detection of subtle surface changes). Recently a generalized approach was published that provides consistent Landsat view angle corrections to provide nadir BRDF-adjusted reflectance (NBAR). Because the BRDF shapes of different terrestrial surfaces are sufficiently similar over the narrow 15° Landsat field of view, a fixed global set of MODIS BRDF spectral model parameters was shown to be adequate for Landsat NBAR derivation with little sensitivity to the land cover type, condition, or surface disturbance. This poster demonstrates the application of this methodology to Sentinel-2 data over a west-east transect across southern Africa. The reflectance differences between adjacent overlapping paths in the forward and backward scatter directions are quantified for both before and after BRDF correction. Sentinel-2 and Landsat-8 reflectance and NBAR inter-comparison results considering different stages of cloud and saturation filtering, and filtering to reduce surface state differences caused by acquisition time differences, demonstrate the utility of the approach. The relevance and limitations of the corrections for providing consistent moderate resolution reflectance are discussed.

Spectral mixture analyses of hyperspectral data acquired using a tethered balloon

USGS Publications Warehouse

Chen, Xuexia; Vierling, Lee

2006-01-01

Tethered balloon remote sensing platforms can be used to study radiometric issues in terrestrial ecosystems by effectively bridging the spatial gap between measurements made on the ground and those acquired via airplane or satellite. In this study, the Short Wave Aerostat-Mounted Imager (SWAMI) tethered balloon-mounted platform was utilized to evaluate linear and nonlinear spectral mixture analysis (SMA) for a grassland-conifer forest ecotone during the summer of 2003. Hyperspectral measurement of a 74-m diameter ground instantaneous field of view (GIFOV) attained by the SWAMI was studied. Hyperspectral spectra of four common endmembers, bare soil, grass, tree, and shadow, were collected in situ, and images captured via video camera were interpreted into accurate areal ground cover fractions for evaluating the mixture models. The comparison between the SWAMI spectrum and the spectrum derived by combining in situ spectral data with video-derived areal fractions indicated that nonlinear effects occurred in the near infrared (NIR) region, while nonlinear influences were minimal in the visible region. The evaluation of hyperspectral and multispectral mixture models indicated that nonlinear mixture model-derived areal fractions were sensitive to the model input data, while the linear mixture model performed more stably. Areal fractions of bare soil were overestimated in all models due to the increased radiance of bare soil resulting from side scattering of NIR radiation by adjacent grass and trees. Unmixing errors occurred mainly due to multiple scattering as well as close endmember spectral correlation. In addition, though an apparent endmember assemblage could be derived using linear approaches to yield low residual error, the tree and shade endmember fractions calculated using this technique were erroneous and therefore separate treatment of endmembers subject to high amounts of multiple scattering (i.e. shadows and trees) must be done with caution. Including the short wave infrared (SWIR) region in the hyperspectral and multispectral endmember data significantly reduced the Pearson correlation coefficient values among endmember spectra. Therefore, combination of visible, NIR, and SWIR information is likely to further improve the utility of SMA in understanding ecosystem structure and function and may help narrow uncertainties when utilizing remotely sensed data to extrapolate trace glas flux measurements from the canopy scale to the landscape scale.

Utilizing a Tower Based System for Optical Sensing of Ecosystem Carbon Fluxes

NASA Astrophysics Data System (ADS)

Huemmrich, K. F.; Corp, L. A.; Middleton, E.; Campbell, P. K. E.; Landis, D.; Kustas, W. P.

2015-12-01

Optical sampling of spectral reflectance and solar induced fluorescence provide information on the physiological status of vegetation that can be used to infer stress responses and estimates of production. Multiple repeated observations are required to observe the effects of changing environmental conditions on vegetation. This study examines the use of optical signals to determine inputs to a light use efficiency (LUE) model describing productivity of a cornfield where repeated observations of carbon flux, spectral reflectance and fluorescence were collected. Data were collected at the Optimizing Production Inputs for Economic and Environmental Enhancement (OPE3) fields (39.03°N, 76.85°W) at USDA Beltsville Agricultural Research Center. Agricultural Research Service researchers measured CO2 fluxes using eddy covariance methods throughout the growing season. Optical measurements were made from the nearby tower supporting the NASA FUSION sensors. The sensor system consists of two dual channel, upward and downward looking, spectrometers used to simultaneously collect high spectral resolution measurements of reflected and fluoresced light from vegetation canopies at multiple view angles. Estimates of chlorophyll fluorescence, combined with measures of vegetation pigment content and the Photosynthetic Reflectance Index (PRI) derived from the spectral reflectance are compared with CO2 fluxes over diurnal periods for multiple days. The relationships among the different optical measurements indicate that they are providing different types of information on the vegetation and that combinations of these measurements provide improved retrievals of CO2 fluxes than any index alone

Usability of multiangular imaging spectroscopy data for analysis of vegetation canopy shadow fraction in boreal forest

NASA Astrophysics Data System (ADS)

Markiet, Vincent; Perheentupa, Viljami; Mõttus, Matti; Hernández-Clemente, Rocío

2016-04-01

Imaging spectroscopy is a remote sensing technology which records continuous spectral data at a very high (better than 10 nm) resolution. Such spectral images can be used to monitor, for example, the photosynthetic activity of vegetation. Photosynthetic activity is dependent on varying light conditions and varies within the canopy. To measure this variation we need very high spatial resolution data with resolution better than the dominating canopy element size (e.g., tree crown in a forest canopy). This is useful, e.g., for detecting photosynthetic downregulation and thus plant stress. Canopy illumination conditions are often quantified using the shadow fraction: the fraction of visible foliage which is not sunlit. Shadow fraction is known to depend on view angle (e.g., hot spot images have very low shadow fraction). Hence, multiple observation angles potentially increase the range of shadow fraction in the imagery in high spatial resolution imaging spectroscopy data. To investigate the potential of multi-angle imaging spectroscopy in investigating canopy processes which vary with shadow fraction, we obtained a unique multiangular airborne imaging spectroscopy data for the Hyytiälä forest research station located in Finland (61° 50'N, 24° 17'E) in July 2015. The main tree species are Norway spruce (Picea abies L. karst), Scots pine (Pinus sylvestris L.) and birch (Betula pubescens Ehrh., Betula pendula Roth). We used an airborne hyperspectral sensor AISA Eagle II (Specim - Spectral Imaging Ltd., Finland) mounted on a tilting platform. The tilting platform allowed us to measure at nadir and approximately 35 degrees off-nadir. The hyperspectral sensor has a 37.5 degrees field of view (FOV), 0.6m pixel size, 128 spectral bands with an average spectral bandwidth of 4.6nm and is sensitive in the 400-1000 nm spectral region. The airborne data was radiometrically, atmospherically and geometrically processed using the Parge and Atcor software (Re Se applications Schläpfer, Switzerland). However, even after meticulous geolocation, the canopy elements (needles) seen from the three view angles were different: at each overpass, different parts of the same crowns were observed. To overcome this, we used a 200m x 200m test site covered with pure pine stands. We assumed that for sunlit, shaded and understory spectral signatures are independent of viewing direction to the accuracy of a constant BRDF factor. Thus, we compared the spectral signatures for sunlit and shaded canopy and understory obtained for each view direction. We selected visually six hundred of the brightest and darkest canopy pixels. Next, we performed a minimum noise fraction (MNF) transformation, created a pixel purity index (PPI) and used Envi's n-D scatterplot to determine pure spectral signatures for the two classes. The pure endmembers for different view angles were compared to determine the BRDF factor and to analyze its spectral invariance. We demonstrate the compatibility of multi-angle data with high spatial resolution data. In principle, both carry similar information on structured (non-flat) targets thus as a vegetation canopy. Nevertheless, multiple view angles helped us to extend the range of shadow fraction in the images. Also, correct separation of shaded crown and shaded understory pixels remains a challenge.

Use of a custom RT-PCR array to analyze toxicity pathways at different life stages in Brown Norway Rat Brain following acute Toluene exposure.

EPA Science Inventory

To investigate the contribution of different life stages on response to toxicants, we utilized a custom designed RT-PCR array to examine the effects of acute exposure by oral gavage of the volatile organic solvent toluene (0.00, 0.65 or 1.0 glkg) in the brains of ma1e Brown Norwa...

Potential of remote sensing of cirrus optical thickness by airborne spectral radiance measurements at different sideward viewing angles

NASA Astrophysics Data System (ADS)

Wolf, Kevin; Ehrlich, André; Hüneke, Tilman; Pfeilsticker, Klaus; Werner, Frank; Wirth, Martin; Wendisch, Manfred

2017-03-01

Spectral radiance measurements collected in nadir and sideward viewing directions by two airborne passive solar remote sensing instruments, the Spectral Modular Airborne Radiation measurement sysTem (SMART) and the Differential Optical Absorption Spectrometer (mini-DOAS), are used to compare the remote sensing results of cirrus optical thickness τ. The comparison is based on a sensitivity study using radiative transfer simulations (RTS) and on data obtained during three airborne field campaigns: the North Atlantic Rainfall VALidation (NARVAL) mission, the Mid-Latitude Cirrus Experiment (ML-CIRRUS) and the Aerosol, Cloud, Precipitation, and Radiation Interactions and Dynamics of Convective Cloud Systems (ACRIDICON) campaign. Radiative transfer simulations are used to quantify the sensitivity of measured upward radiance I with respect to τ, ice crystal effective radius reff, viewing angle of the sensor θV, spectral surface albedo α, and ice crystal shape. From the calculations it is concluded that sideward viewing measurements are generally better suited than radiance data from the nadir direction to retrieve τ of optically thin cirrus, especially at wavelengths larger than λ = 900 nm. Using sideward instead of nadir-directed spectral radiance measurements significantly improves the sensitivity and accuracy in retrieving τ, in particular for optically thin cirrus of τ ≤ 2. The comparison of retrievals of τ based on nadir and sideward viewing radiance measurements from SMART, mini-DOAS and independent estimates of τ from an additional active remote sensing instrument, the Water Vapor Lidar Experiment in Space (WALES), shows general agreement within the range of measurement uncertainties. For the selected example a mean τ of 0.54 ± 0.2 is derived from SMART, and 0.49 ± 0.2 by mini-DOAS nadir channels, while WALES obtained a mean value of τ = 0.32 ± 0.02 at 532 nm wavelength, respectively. The mean of τ derived from the sideward viewing mini-DOAS channels is 0.26 ± 0.2. For the few simultaneous measurements, the mini-DOAS sideward channel measurements systematically underestimate (-17.6 %) the nadir observations from SMART and mini-DOAS. The agreement between mini-DOAS sideward viewing channels and WALES is better, showing the advantage of using sideward viewing measurements for cloud remote sensing for τ ≤ 1. Therefore, we suggest sideward viewing measurements for retrievals of τ of thin cirrus because of the significantly enhanced capability of sideward viewing compared to nadir measurements.

Experimental study of quantitative assessment of left ventricular mass with contrast enhanced real-time three-dimensional echocardiography.

PubMed

Zhuang, Lei; Wang, Xin-Fang; Xie, Ming-Xing; Chen, Li-Xin; Fei, Hong-Wen; Yang, Ying; Wang, Jing; Huang, Run-Qing; Chen, Ou-Di; Wang, Liang-Yu

2004-01-01

To evaluate the feasibility and accuracy of measurement of left ventricular mass with intravenous contrast enhanced real-time three-dimensional (RT3D) echocardiography in the experimental setting. RT3D echocardiography was performed in 13 open-chest mongrel dogs before and after intravenous infusion of a perfluorocarbon contrast agent. Left ventricular myocardium volume was measured according to the apical four-plane method provided by TomTec 4D cardio-View RT1.0 software, then the left ventricular mass was calculated as the myocardial volume multiplied by the relative density of myocardium. Correlative analysis and paired t-test were performed between left ventricular mass obtained from RT3D echocardiography and the anatomic measurements. Anatomic measurement of total left ventricular mass was 55.6 +/- 9.3 g, whereas RT3D echocardiographic calculation of left ventricular mass before and after intravenous perfluorocarbon contrast agent was 57.5 +/- 11.4 and 55.5 +/- 9.3 g, respectively. A significant correlation was observed between the RT3D echocardiographic estimates of total left ventricular mass and the corresponding anatomic measurements (r = 0.95). A strong correlation was found between RT3D echocardiographic estimates of left ventricular mass with perfluorocarbon contrast and the anatomic results (r = 0.99). Analysis of intraobserver and interobserver variability showed strong indexes of agreement in the measurement of left ventricular mass with pre and post-contrast RT3D echocardiography. Measurements of left ventricular mass derived from RT3D echocardiography with and without intravenous contrast showed a significant correlation with the anatomic results. Contrast enhanced RT3D echocardiography permitted better visualization of the endocardial border, which would provide a more accurate and reliable means of determining left ventricular myocardial mass in the experimental setting.

Use of Hansen Solubility Parameters in Fuel Treatment Processes

DTIC Science & Technology

2014-03-17

Clearance # Considerations for Rocket Fuel Objective: Utilize liquid/liquid extraction process to improve performance, increase availability, and...1/4)(H1 - H0)2 - (D2 – D0)2 - (1/4) (P2 - P0)2 - (1/4)(H2 - H0)2 ] + RT ln (V1/ V2 ) K = C0,2 / CO,1 Partition coefficient RT ln K = V0( D1...02 – D2-02 ) + RT ln (V1/ V2 ) Di-0 is the distance in “solubility parameter space” between liquid i and impurity 0. For reference, phase 1 = fuel

Idea Bank.

ERIC Educational Resources Information Center

Herlocker, Helen; And Others

1988-01-01

Provides information on motivational activities, demonstrations, experiments, software, lessons, field trips, and a game as ideas for instructional use. Includes topics on digestion in paramecium, diffusion, cells, interactive displays, slime molds, and the construction of an underwater viewing device. (RT)

Views of the Purse-String Holders

ERIC Educational Resources Information Center

Boyles, Billy O.

1977-01-01

Explores the attitudes of legislators towards the college public relations function through interviews with Florida senators and representatives, and cites the need to establish a clearer identity with them in order to secure necessary funding. (RT)

Angular difference feature extraction for urban scene classification using ZY-3 multi-angle high-resolution satellite imagery

NASA Astrophysics Data System (ADS)

Huang, Xin; Chen, Huijun; Gong, Jianya

2018-01-01

Spaceborne multi-angle images with a high-resolution are capable of simultaneously providing spatial details and three-dimensional (3D) information to support detailed and accurate classification of complex urban scenes. In recent years, satellite-derived digital surface models (DSMs) have been increasingly utilized to provide height information to complement spectral properties for urban classification. However, in such a way, the multi-angle information is not effectively exploited, which is mainly due to the errors and difficulties of the multi-view image matching and the inaccuracy of the generated DSM over complex and dense urban scenes. Therefore, it is still a challenging task to effectively exploit the available angular information from high-resolution multi-angle images. In this paper, we investigate the potential for classifying urban scenes based on local angular properties characterized from high-resolution ZY-3 multi-view images. Specifically, three categories of angular difference features (ADFs) are proposed to describe the angular information at three levels (i.e., pixel, feature, and label levels): (1) ADF-pixel: the angular information is directly extrapolated by pixel comparison between the multi-angle images; (2) ADF-feature: the angular differences are described in the feature domains by comparing the differences between the multi-angle spatial features (e.g., morphological attribute profiles (APs)). (3) ADF-label: label-level angular features are proposed based on a group of urban primitives (e.g., buildings and shadows), in order to describe the specific angular information related to the types of primitive classes. In addition, we utilize spatial-contextual information to refine the multi-level ADF features using superpixel segmentation, for the purpose of alleviating the effects of salt-and-pepper noise and representing the main angular characteristics within a local area. The experiments on ZY-3 multi-angle images confirm that the proposed ADF features can effectively improve the accuracy of urban scene classification, with a significant increase in overall accuracy (3.8-11.7%) compared to using the spectral bands alone. Furthermore, the results indicated the superiority of the proposed ADFs in distinguishing between the spectrally similar and complex man-made classes, including roads and various types of buildings (e.g., high buildings, urban villages, and residential apartments).

Improving Estimated Optical Constants With MSTM and DDSCAT Modeling

NASA Astrophysics Data System (ADS)

Pitman, K. M.; Wolff, M. J.

2015-12-01

We present numerical experiments to determine quantitatively the effects of mineral particle clustering on Mars spacecraft spectral signatures and to improve upon the values of refractive indices (optical constants n, k) derived from Mars dust laboratory analog spectra such as those from RELAB and MRO CRISM libraries. Whereas spectral properties for Mars analog minerals and actual Mars soil are dominated by aggregates of particles smaller than the size of martian atmospheric dust, the analytic radiative transfer (RT) solutions used to interpret planetary surfaces assume that individual, well-separated particles dominate the spectral signature. Both in RT models and in the refractive index derivation methods that include analytic RT approximations, spheres are also over-used to represent nonspherical particles. Part of the motivation is that the integrated effect over randomly oriented particles on quantities such as single scattering albedo and phase function are relatively less than for single particles. However, we have seen in previous numerical experiments that when varying the shape and size of individual grains within a cluster, the phase function changes in both magnitude and slope, thus the "relatively less" effect is more significant than one might think. Here we examine the wavelength dependence of the forward scattering parameter with multisphere T-matrix (MSTM) and discrete dipole approximation (DDSCAT) codes that compute light scattering by layers of particles on planetary surfaces to see how albedo is affected and integrate our model results into refractive index calculations to remove uncertainties in approximations and parameters that can lower the accuracy of optical constants. By correcting the single scattering albedo and phase function terms in the refractive index determinations, our data will help to improve the understanding of Mars in identifying, mapping the distributions, and quantifying abundances for these minerals and will address long-standing questions on fundamental physics in the martian surface (e.g., what is the fundamental scattering unit for closely packed dust or regolith grains?). This work was supported by NASA's Mars Fundamental Research Program and performed with the Pleiades cluster courtesy of NASA's Advanced Supercomputing Division.

Estimation of Multiple Parameters over Vegetated Surfaces by Integrating Optical-Thermal Remote Sensing Observations

NASA Astrophysics Data System (ADS)

Ma, H.

2016-12-01

Land surface parameters from remote sensing observations are critical in monitoring and modeling of global climate change and biogeochemical cycles. Current methods for estimating land surface parameters are generally parameter-specific algorithms and are based on instantaneous physical models, which result in spatial, temporal and physical inconsistencies in current global products. Besides, optical and Thermal Infrared (TIR) remote sensing observations are usually separated to use based on different models , and the Middle InfraRed (MIR) observations have received little attention due to the complexity of the radiometric signal that mixes both reflected and emitted fluxes. In this paper, we proposed a unified algorithm for simultaneously retrieving a total of seven land surface parameters, including Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), land surface albedo, Land Surface Temperature (LST), surface emissivity, downward and upward longwave radiation, by exploiting remote sensing observations from visible to TIR domain based on a common physical Radiative Transfer (RT) model and a data assimilation framework. The coupled PROSPECT-VISIR and 4SAIL RT model were used for canopy reflectance modeling. At first, LAI was estimated using a data assimilation method that combines MODIS daily reflectance observation and a phenology model. The estimated LAI values were then input into the RT model to simulate surface spectral emissivity and surface albedo. Besides, the background albedo and the transmittance of solar radiation, and the canopy albedo were also calculated to produce FAPAR. Once the spectral emissivity of seven MODIS MIR to TIR bands were retrieved, LST can be estimated from the atmospheric corrected surface radiance by exploiting an optimization method. At last, the upward longwave radiation were estimated using the retrieved LST, broadband emissivity (converted from spectral emissivity) and the downward longwave radiation (modeled by MODTRAN). These seven parameters were validated over several representative sites with different biome type, and compared with MODIS and GLASS product. Results showed that this unified inversion algorithm can retrieve temporally complete and physical consistent land surface parameters with high accuracy.

Exploratory normalized difference water indices for semi-automated extraction of Antarctic lake features

NASA Astrophysics Data System (ADS)

Jawak, Shridhar D.; Luis, Alvarinho J.

2016-05-01

This work presents various normalized difference water indices (NDWI) to delineate lakes from Schirmacher Oasis, East Antarctica, by using a very high resolution WorldView-2 (WV-2) satellite imagery. Schirmacher oasis region hosts a number of fresh as well as saline water lakes, such as epishelf lakes, ice-free or landlocked lakes, which are completely frozen or semi-frozen and in a ice-free state. Hence, detecting all these types of lakes distinctly on satellite imagery was the major challenge, as the spectral characteristics of various types of lakes were identical to the other land cover targets. Multiband spectral index pixel-based approach is most experimented and recently growing technique because of its unbeatable advantages such as its simplicity and comparatively lesser amount of processing-time. In present study, semiautomatic extraction of lakes in cryospheric region was carried out by designing specific spectral indices. The study utilized number of existing spectral indices to extract lakes but none could deliver satisfactory results and hence we modified NDWI. The potentials of newly added bands in WV-2 satellite imagery was explored by developing spectral indices comprising of Yellow (585 - 625 nm) band, in combination with Blue (450 - 510 nm), Coastal (400 - 450 nm) and Green (510 - 580 nm) bands. For extraction of frozen lakes, use of Yellow (585 - 625 nm) and near-infrared 2 (NIR2) band pair, and Yellow and Green band pair worked well, whereas for ice-free lakes extraction, a combination of Blue and Coastal band yielded appreciable results, when compared with manually digitized data. The results suggest that the modified NDWI approach rendered bias error varying from 1 to 34 m2.

Application of Polarization to the MODIS Aerosol Retrieval Over Land

NASA Technical Reports Server (NTRS)

Levy, Robert C.; Remer, Lorraine R.; Kaufman, Yoram J.

2004-01-01

Reflectance measurements in the visible and infrared wavelengths, from the Moderate Resolution Imaging Spectroradiometer (MODIS), are used to derive aerosol optical thicknesses (AOT) and aerosol properties over land surfaces. The measured spectral reflectance is compared with lookup tables, containing theoretical reflectance calculated by radiative transfer (RT) code. Specifically, this RT code calculates top of the atmosphere (TOA) intensities based on a scalar treatment of radiation, neglecting the effects of polarization. In the red and near infrared (NIR) wavelengths the use of the scalar RT code is of sufficient accuracy to model TOA reflectance. However, in the blue, molecular and aerosol scattering dominate the TOA signal. Here, polarization effects can be large, and should be included in the lookup table derivation. Using a RT code that allows for both vector and scalar calculations, we examine the reflectance differences at the TOA, with and without polarization. We find that the differences in blue channel TOA reflectance (vector - scalar) may reach values of 0.01 or greater, depending on the sun/surface/sensor scattering geometry. Reflectance errors of this magnitude translate to AOT differences of 0.1, which is a very large error, especially when the actual AOT is low. As a result of this study, the next version of aerosol retrieval from MODIS over land will include polarization.

Radiometric Measurement Comparison Using the Ocean Color Temperature Scanner (OCTS) Visible and Near Infrared Integrating Sphere

PubMed Central

Johnson, B. Carol; Sakuma, F.; Butler, J. J.; Biggar, S. F.; Cooper, J. W.; Ishida, J.; Suzuki, K.

1997-01-01

As a part of the pre-flight calibration and validation activities for the Ocean Color and Temperature Scanner (OCTS) and the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) ocean color satellite instruments, a radiometric measurement comparison was held in February 1995 at the NEC Corporation in Yokohama, Japan. Researchers from the National Institute of Standards and Technology (NIST), the National Aeronautics and Space Administration/Goddard Space Flight Center (NASA/GSFC), the University of Arizona Optical Sciences Center (UA), and the National Research Laboratory of Metrology (NRLM) in Tsukuba, Japan used their portable radiometers to measure the spectral radiance of the OCTS visible and near-infrared integrating sphere at four radiance levels. These four levels corresponded to the configuration of the OCTS integrating sphere when the calibration coefficients for five of the eight spectral channels, or bands, of the OCTS instrument were determined. The measurements of the four radiometers differed by −2.7 % to 3.9 % when compared to the NEC calibration of the sphere and the overall agreement was within the combined measurement uncertainties. A comparison of the measurements from the participating radiometers also resulted in agreement within the combined measurement uncertainties. These results are encouraging and demonstrate the utility of comparisons using laboratory calibration integrating sphere sources. Other comparisons will focus on instruments that are scheduled for spacecraft in the NASA study of climate change, the Earth Observing System (EOS). PMID:27805113

The Feasibility of Tropospheric and Total Ozone Determination Using a Fabry-perot Interferometer as a Satellite-based Nadir-viewing Atmospheric Sensor. Ph.D. Thesis

NASA Technical Reports Server (NTRS)

Larar, Allen Maurice

1993-01-01

Monitoring of the global distribution of tropospheric ozone (O3) is desirable for enhanced scientific understanding as well as to potentially lessen the ill-health impacts associated with exposure to elevated concentrations in the lower atmosphere. Such a capability can be achieved using a satellite-based device making high spectral resolution measurements with high signal-to-noise ratios; this would enable observation in the pressure-broadened wings of strong O3 lines while minimizing the impact of undesirable signal contributions associated with, for example, the terrestrial surface, interfering species, and clouds. The Fabry-Perot Interferometer (FPI) provides high spectral resolution and high throughput capabilities that are essential for this measurement task. Through proper selection of channel spectral regions, the FPI optimized for tropospheric O3 measurements can simultaneously observe a stratospheric component and thus the total O3 column abundance. Decreasing stratospheric O3 concentrations may lead to an increase in biologically harmful solar ultraviolet radiation reaching the earth's surface, which is detrimental to health. In this research, a conceptual instrument design to achieve the desired measurement has been formulated. This involves a double-etalon fixed-gap series configuration FPI along with an ultra-narrow bandpass filter to achieve single-order operation with an overall spectral resolution of approximately .068 cm(exp -1). A spectral region of about 1 cm(exp -1) wide centered at 1054.73 cm(exp -1) within the strong 9.6 micron ozone infrared band is sampled with 24 spectral channels. Other design characteristics include operation from a nadir-viewing satellite configuration utilizing a 9 inch (diameter) telescope and achieving horizontal spatial resolution with a 50 km nadir footprint. A retrieval technique has been implemented and is demonstrated for a tropical atmosphere possessing enhanced tropospheric ozone amounts. An error analysis assessing the impact on retrieved O3 amounts of the most significant uncertainties associated with this particular measurement has been performed for several different types of atmospheres. Results show the proposed instrumentation to enable a good measurement of absolute ozone amounts and an even better determination of relative changes, with a range of accuracy to within 7.55 to 20.6 percent for integrated tropospheric amounts (and 1.99 to 4.02 percent for total O3 column abundance) and a corresponding range in precision to within 7.73 to 10.4 percent (and 3.30 to 3.95 percent for total O3 column abundance), for the atmospheric conditions considered.

Evolution of colour vision in mammals.

PubMed

Jacobs, Gerald H

2009-10-12

Colour vision allows animals to reliably distinguish differences in the distributions of spectral energies reaching the eye. Although not universal, a capacity for colour vision is sufficiently widespread across the animal kingdom to provide prima facie evidence of its importance as a tool for analysing and interpreting the visual environment. The basic biological mechanisms on which vertebrate colour vision ultimately rests, the cone opsin genes and the photopigments they specify, are highly conserved. Within that constraint, however, the utilization of these basic elements varies in striking ways in that they appear, disappear and emerge in altered form during the course of evolution. These changes, along with other alterations in the visual system, have led to profound variations in the nature and salience of colour vision among the vertebrates. This article concerns the evolution of colour vision among the mammals, viewing that process in the context of relevant biological mechanisms, of variations in mammalian colour vision, and of the utility of colour vision.

Evolution of colour vision in mammals

PubMed Central

Jacobs, Gerald H.

2009-01-01

Colour vision allows animals to reliably distinguish differences in the distributions of spectral energies reaching the eye. Although not universal, a capacity for colour vision is sufficiently widespread across the animal kingdom to provide prima facie evidence of its importance as a tool for analysing and interpreting the visual environment. The basic biological mechanisms on which vertebrate colour vision ultimately rests, the cone opsin genes and the photopigments they specify, are highly conserved. Within that constraint, however, the utilization of these basic elements varies in striking ways in that they appear, disappear and emerge in altered form during the course of evolution. These changes, along with other alterations in the visual system, have led to profound variations in the nature and salience of colour vision among the vertebrates. This article concerns the evolution of colour vision among the mammals, viewing that process in the context of relevant biological mechanisms, of variations in mammalian colour vision, and of the utility of colour vision. PMID:19720656

How feasible is remote 3D dosimetry for MR guided Radiation Therapy (MRgRT)?

NASA Astrophysics Data System (ADS)

Mein, S.; Rankine, L.; Miles, D.; Juang, T.; Cai, B.; Curcuru, A.; Mutic, S.; Fenoli, J.; Adamovics, J.; Li, H.; Oldham, M.

2017-05-01

To develop and apply a remote dosimetry protocol with PRESAGE® radiochromic plastic and optical-CT readout in the validation of MRI guided radiation therapy (MRgRT) treatments (MRIdian® by ViewRay®). Through multi-institutional collaboration we performed PRESAGE® dosimetry studies in 4ml cuvettes to investigate dose-response linearity, MR-compatibility, and energy-independence. An open calibration field and symmetrical 3-field plans were delivered to 10cm diameter PRESAGE® to examine percent depth dose and response uniformity under a magnetic field. Evidence of non-linear dose response led to a large volume PRESAGE® study where small corrections were developed for temporally- and spatially-dependent behaviors observed between irradiation and delayed readout. TG-119 plans were created in the MRIdian® TPS and then delivered to 14.5cm 2kg PRESAGE® dosimeters. Through the domestic investigation of an off-site MRgRT system, a refined 3D remote dosimetry protocol is presented capable of validation of advanced MRgRT radiation treatments.

Biophysical and spectral modeling for crop identification and assessment

NASA Technical Reports Server (NTRS)

Goel, N. S. (Principal Investigator)

1984-01-01

The development of a technique for estimating all canopy parameters occurring in a canopy reflectance model from the measured canopy reflectance data is summarized. The Suits and the SAIL model for a uniform and homogeneous crop canopy were used to determine if the leaf area index and the leaf angle distribution could be estimated. Optimal solar/view angles for measuring CR were also investigated. The use of CR in many wavelengths or spectral bands and of linear and nonlinear transforms of CRs for various solar/view angles and various spectral bands is discussed as well as the inversion of rediance data inside the canopy, angle transforms for filtering out terrain slope effects, and modification of one dimensional models.

Spectral Clustering and Geomorphological Analysis on Mercury Hollows

NASA Astrophysics Data System (ADS)

Lucchetti, A.; Pajola, M.; Galluzzi, V.; Giacomini, L.; Carli, C.; Cremonese, G.; Marzo, G. A.; Massironi, M.; Roush, T.

2018-05-01

Characterization of hollows located in different craters to understand whether there is a similar trend from a compositional point of view, and whether a possible correlation exists between spectral behavior of hollows and geomorphological units.

Spectral and spatial variability of undisturbed and disturbed grass under different view and illumination directions

NASA Astrophysics Data System (ADS)

Borel-Donohue, Christoph C.; Shivers, Sarah Wells; Conover, Damon

2017-05-01

It is well known that disturbed grass covered surfaces show variability with view and illumination conditions. A good example is a grass field in a soccer stadium that shows stripes indicating in which direction the grass was mowed. These spatial variations are due to a complex interplay of spectral characteristics of grass blades, density, their length and orientations. Viewing a grass surface from nadir or near horizontal directions results in observing different components. Views from a vertical direction show more variations due to reflections from the randomly oriented grass blades and their shadows. Views from near horizontal show a mixture of reflected and transmitted light from grass blades. An experiment was performed on a mowed grass surface which had paths of simulated heavy foot traffic laid down in different directions. High spatial resolution hyperspectral data cubes were taken by an imaging spectrometer covering the visible through near infrared over a period of time covering several hours. Ground truth grass reflectance spectra with a hand held spectrometer were obtained of undisturbed and disturbed areas. Close range images were taken of selected areas with a hand held camera which were then used to reconstruct the 3D geometry of the grass using structure-from-motion algorithms. Computer graphics rendering using raytracing of reconstructed and procedurally created grass surfaces were used to compute BRDF models. In this paper, we discuss differences between observed and simulated spectral and spatial variability. Based on the measurements and/or simulations, we derive simple spectral index methods to detect spatial disturbances and apply scattering models.

Evaluation of ALK gene rearrangement in central nervous system metastases of non-small-cell lung cancer using two-step RT-PCR technique.

PubMed

Nicoś, M; Krawczyk, P; Wojas-Krawczyk, K; Bożyk, A; Jarosz, B; Sawicki, M; Trojanowski, T; Milanowski, J

2017-12-01

RT-PCR technique has showed a promising value as pre-screening method for detection of mRNA containing abnormal ALK sequences, but its sensitivity and specificity is still discussable. Previously, we determined the incidence of ALK rearrangement in CNS metastases of NSCLC using IHC and FISH methods. We evaluated ALK gene rearrangement using two-step RT-PCR method with EML4-ALK Fusion Gene Detection Kit (Entrogen, USA). The studied group included 145 patients (45 females, 100 males) with CNS metastases of NSCLC and was heterogeneous in terms of histology and smoking status. 21% of CNS metastases of NSCLC (30/145) showed presence of mRNA containing abnormal ALK sequences. FISH and IHC tests confirmed the presence of ALK gene rearrangement and expression of ALK abnormal protein in seven patients with positive result of RT-PCR analysis (4.8% of all patients, 20% of RT-PCR positive patients). RT-PCR method compared to FISH analysis achieved 100% of sensitivity and only 82.7% of specificity. IHC method compared to FISH method indicated 100% of sensitivity and 97.8% of specificity. In comparison to IHC, RT-PCR showed identical sensitivity with high number of false positive results. Utility of RT-PCR technique in screening of ALK abnormalities and in qualification patients for molecularly targeted therapies needs further validation.

ASD FieldSpec Calibration Setup and Techniques

NASA Technical Reports Server (NTRS)

Olive, Dan

2001-01-01

This paper describes the Analytical Spectral Devices (ASD) Fieldspec Calibration Setup and Techniques. The topics include: 1) ASD Fieldspec FR Spectroradiometer; 2) Components of Calibration; 3) Equipment list; 4) Spectral Setup; 5) Spectral Calibration; 6) Radiometric and Linearity Setup; 7) Radiometric setup; 8) Datadets Required; 9) Data files; and 10) Field of View Measurement. This paper is in viewgraph form.

Utility of Deep Inspiration Breath Hold for Left-Sided Breast Radiation Therapy in Preventing Early Cardiac Perfusion Defects: A Prospective Study

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zagar, Timothy M., E-mail: zagar@med.unc.edu; Kaidar-Person, Orit; Tang, Xiaoli

Purpose: To evaluate early cardiac single photon computed tomography (SPECT) findings after left breast/chest wall postoperative radiation therapy (RT) in the setting of deep inspiration breath hold (DIBH). Methods and Materials: We performed a prospective single-institution single-arm study of patients who were planned for tangential RT with DIBH to the left breast/chest wall (± internal mammary nodes). The DIBH was done by use of a controlled surface monitoring technique (AlignRT, Vision RT Ltd, London, UK). The RT was given with tangential fields and a heart block. Radiation-induced cardiac perfusion and wall motion changes were assessed by pre-RT and 6-month post-RTmore » SPECT scans. A cumulative SPECT summed-rest score was used to quantify perfusion in predefined left ventricle segments. The incidence of wall motion abnormalities was assessed in each of these same segments. Results: A total of 20 patients with normal pre-RT scans were studied; their median age was 56 years (range, 39-72 years). Seven (35%) patients also received irradiation to the left internal mammary chain, and 5 (25%) received an additional RT field to supraclavicular nodes. The median heart dose was 94 cGy (range, 56-200 cGy), and the median V25{sub Gy} was zero (range, 0-0.1). None of the patients had post-RT perfusion or wall motion abnormalities. Conclusions: Our results suggest that DIBH and conformal cardiac blocking for patients receiving tangential RT for left-sided breast cancer is an effective means to avoid early RT-associated cardiac perfusion defects.« less

Real-Time Three-Dimensional Echocardiography: Characterization of Cardiac Anatomy and Function-Current Clinical Applications and Literature Review Update.

PubMed

Velasco, Omar; Beckett, Morgan Q; James, Aaron W; Loehr, Megan N; Lewis, Taylor G; Hassan, Tahmin; Janardhanan, Rajesh

2017-01-01

Our review of real-time three-dimensional echocardiography (RT3DE) discusses the diagnostic utility of RT3DE and provides a comparison with two-dimensional echocardiography (2DE) in clinical cardiology. A Pubmed literature search on RT3DE was performed using the following key words: transthoracic, two-dimensional, three-dimensional, real-time, and left ventricular (LV) function. Articles included perspective clinical studies and meta-analyses in the English language, and focused on the role of RT3DE in human subjects. Application of RT3DE includes analysis of the pericardium, right ventricular (RV) and LV cavities, wall motion, valvular disease, great vessels, congenital anomalies, and traumatic injury, such as myocardial contusion. RT3DE, through a transthoracic echocardiography (TTE), allows for increasingly accurate volume and valve motion assessment, estimated LV ejection fraction, and volume measurements. Chamber motion and LV mass approximation have been more accurately evaluated by RT3DE by improved inclusion of the third dimension and quantification of volumetric movement. Moreover, RT3DE was shown to have no statistical significance when comparing the ejection fractions of RT3DE to cardiac magnetic resonance (CMR). Analysis of RT3DE data sets of the LV endocardial exterior allows for the volume to be directly quantified for specific phases of the cardiac cycle, ranging from end systole to end diastole, eliminating error from wall motion abnormalities and asymmetrical left ventricles. RT3DE through TTE measures cardiac function with superior diagnostic accuracy in predicting LV mass, systolic function, along with LV and RV volume when compared with 2DE with comparable results to CMR.

Development and evaluation of a simple and effective RT-qPCR inhibitory assay for detection of the efficacy of compounds towards HIV reverse transcriptase.

PubMed

Marino-Merlo, Francesca; Frezza, Caterina; Papaianni, Emanuela; Valletta, Elena; Mastino, Antonio; Macchi, Beatrice

2017-11-01

Assessing the actual efficacy of compounds to directly inhibit HIV reverse transcriptase (RT) activity is a main goal in preclinical antiretroviral studies. Our previous studies demonstrated that the effects of inhibitor compounds towards HIV-RT could be efficiently assessed through a simple cell-free assay based on conventional reverse transcription PCR. In the present study, we describe a modified variant of our assay, termed RT real-time quantitative PCR inhibitory assay (RT-qPCR-IA), in which the ability of compounds to restrict the complementary DNA (cDNA) generation by HIV-RT using a specific RNA template is performed by the real-time technique, in order to improve both accuracy and sensitivity of the method. As specific RNA template, RNA extracted from stable transfectants ectopically expressing the herpes simplex virus 1 glycoprotein D gene was utilized. HIV-RT, of both commercial or house-made viral lysate origin, was employed for the assay. To assess the reliability of RT-qPCR-IA, we performed a comparative, quantitative analysis of the dose-dependent effect exerted by known nucleotide and non-nucleotide reverse-transcriptase inhibitors, using the SYBR Green dye chemistry as detection system. The results obtained with RT-qPCR-IA were compared to that obtained using a one-step PicoGreen technology-based commercial kit. The outcome of our study indicates that the development of the novel RT-qPCR-IA will provide rapid and accurate evaluation of the inhibitory efficacy of compounds towards HIV-RT activity. This evaluation could be very useful for large-scale screening of potential new anti-HIV drugs.

Characterization and Discrimination of Selected Vegetation Canopies from Field Observations of Bidirectional Reflectances. M.S. Thesis

NASA Technical Reports Server (NTRS)

Donovan, Sheila

1985-01-01

A full evaluation of the bidirectional reflectance properties of different vegetated surfaces was limited in past studies by instrumental inadequacies. With the development of the PARABOLA, it is now possible to sample reflectances from a large number of view angles in a short period of time, maintaining an almost constant solar zenith angle. PARABOLA data collected over five different canopies in Texas are analyzed. The objective of this investigation was to evaluate the intercanopy and intracanopy differences in bidirectional reflectance patterns. Particular attention was given to the separability of canopy types using different view angles for the red and the near infrared (NIR) spectral bands. Comparisons were repeated for different solar zenith angles. Statistical and other quantitative techniques were used to assess these differences. For the canopies investigated, the greatest reflectances were found in the backscatter direction for both bands. Canopy discrimination was found to vary with both view angle and the spectral reflectance band considered, the forward scatter view angles being most suited to observations in the NIR and backscatter view angles giving better results in the red band. Because of different leaf angle distribution characteristics, discrimination was found to be better at small solar zenith angles in both spectral bands.

SECULAR CHANGES IN ETA CARINAE'S WIND 1998-2011

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mehner, Andrea; Davidson, Kris; Humphreys, Roberta M.

2012-05-20

Stellar wind-emission features in the spectrum of eta Carinae have decreased by factors of 1.5-3 relative to the continuum within the last 10 years. We investigate a large data set from several instruments (STIS, GMOS, UVES) obtained between 1998 and 2011 and analyze the progression of spectral changes in direct view of the star, in the reflected polar-on spectra at FOS4, and at the Weigelt knots. We find that the spectral changes occurred gradually on a timescale of about 10 years and that they are dependent on the viewing angle. The line strengths declined most in our direct view ofmore » the star. About a decade ago, broad stellar wind-emission features were much stronger in our line-of-sight view of the star than at FOS4. After the 2009 event, the wind-emission line strengths are now very similar at both locations. High-excitation He I and N II absorption lines in direct view of the star strengthened gradually. The terminal velocity of Balmer P Cyg absorption lines now appears to be less latitude dependent, and the absorption strength may have weakened at FOS4. Latitude-dependent alterations in the mass-loss rate and the ionization structure of eta Carinae's wind are likely explanations for the observed spectral changes.« less

ENVIRONMENTAL APPLICATIONS OF SPECTRAL IMAGING

EPA Science Inventory

The utility of remote sensing using spectral imaging is just being realized through the investigation to a wide variety of environmental issues. Improved spectral and spatial resolution is very important to the detection of effects once regarded as unobservable. A current researc...

Evaluating the Impact of AIRS Observations on Regional Forecasts at the SPoRT Center

NASA Technical Reports Server (NTRS)

Zavodsky, Bradley

2011-01-01

NASA Short-term Prediction Research and Transition (SPoRT) Center collaborates with operational partners of different sizes and operational goals to improve forecasts using targeted projects and data sets. Modeling and DA activities focus on demonstrating utility of NASA data sets and capabilities within operational systems. SPoRT has successfully assimilated the Atmospheric Infrared Sounder (AIRS) radiance and profile data. A collaborative project is underway with the Joint Center for Satellite Data Assimilation (JCSDA) to use AIRS profiles to better understand the impact of AIRS radiances assimilated within Gridpoint Statistical Interpolation (GSI) in hopes of engaging the operational DA community in a reassessment of assimilation methodologies to more effectively assimilate hyperspectral radiances.

Analysis of Magnetic Resonance Image Signal Fluctuations Acquired During MR-Guided Radiotherapy.

PubMed

Breto, Adrian L; Padgett, Kyle R; Ford, John C; Kwon, Deukwoo; Chang, Channing; Fuss, Martin; Stoyanova, Radka; Mellon, Eric A

2018-03-28

Magnetic resonance-guided radiotherapy (MRgRT) is a new and evolving treatment modality that allows unprecedented visualization of the tumor and surrounding anatomy. MRgRT includes daily 3D magnetic resonance imaging (MRI) for setup and rapidly repeated near real-time MRI scans during treatment for target tracking. One of the more exciting potential benefits of MRgRT is the ability to analyze serial MRIs to monitor treatment response or predict outcomes. A typical radiation treatment (RT) over the span of 10-15 minutes on the MRIdian system (ViewRay, Cleveland, OH) yields thousands of "cine" images, each acquired in 250 ms. This unique data allows for a glimpse in image intensity changes during RT delivery. In this report, we analyze cine images from a single fraction RT of a glioblastoma patient on the ViewRay platform in order to characterize the dynamic signal changes occurring during RT therapy. The individual frames in the cines were saved into DICOM format and read into an MIM image analysis platform (MIM Software, Cleveland, OH) as a time series. The three possible states of the three Cobalt-60 radiation sources-OFF, READY, and ON-were also recorded. An in-house Java plugin for MIM was created in order to perform principal component analysis (PCA) on each of the datasets. The analysis resulted in first PC, related to monotonous signal increase over the course of the treatment fraction. We found several distortion patterns in the data that we postulate result from the perturbation of the magnetic field due to the moving metal parts in the platform while treatment was being administered. The largest variations were detected when all Cobalt-60 sources were OFF. During this phase of the treatment, the gantry and multi-leaf collimators (MLCs) are moving. Conversely, when all Cobalt-60 sources were in the ON position, the image signal fluctuations were minimal, relating to very little mechanical motion. At this phase, the gantry, the MLCs, and sources are fixed in their positions. These findings were confirmed in a study with the daily quality assurance (QA) phantom. While the identified variations were not related to physiological processes, our findings confirm the sensitivity of the developed approach to identify very small fluctuations. Relating these variations to the physical changes that occur during treatment shows the methodical ability of the technique to uncover their underlying sources.

Simulation of the hyperspectral data from multispectral data using Python programming language

NASA Astrophysics Data System (ADS)

Tiwari, Varun; Kumar, Vinay; Pandey, Kamal; Ranade, Rigved; Agarwal, Shefali

2016-04-01

Multispectral remote sensing (MRS) sensors have proved their potential in acquiring and retrieving information of Land Use Land (LULC) Cover features in the past few decades. These MRS sensor generally acquire data within limited broad spectral bands i.e. ranging from 3 to 10 number of bands. The limited number of bands and broad spectral bandwidth in MRS sensors becomes a limitation in detailed LULC studies as it is not capable of distinguishing spectrally similar LULC features. On the counterpart, fascinating detailed information available in hyperspectral (HRS) data is spectrally over determined and able to distinguish spectrally similar material of the earth surface. But presently the availability of HRS sensors is limited. This is because of the requirement of sensitive detectors and large storage capability, which makes the acquisition and processing cumbersome and exorbitant. So, there arises a need to utilize the available MRS data for detailed LULC studies. Spectral reconstruction approach is one of the technique used for simulating hyperspectral data from available multispectral data. In the present study, spectral reconstruction approach is utilized for the simulation of hyperspectral data using EO-1 ALI multispectral data. The technique is implemented using python programming language which is open source in nature and possess support for advanced imaging processing libraries and utilities. Over all 70 bands have been simulated and validated using visual interpretation, statistical and classification approach.

Management of patients with cardiac implantable electronic devices (CIED) undergoing radiotherapy: A consensus document from Associazione Italiana Aritmologia e Cardiostimolazione (AIAC), Associazione Italiana Radioterapia Oncologica (AIRO), Associazione Italiana Fisica Medica (AIFM).

PubMed

Zecchin, Massimo; Severgnini, Mara; Fiorentino, Alba; Malavasi, Vincenzo Livio; Menegotti, Loris; Alongi, Filippo; Catanzariti, Domenico; Jereczek-Fossa, Barbara Alicja; Stasi, Michele; Russi, Elvio; Boriani, Giuseppe

2018-03-15

The management of patients with a cardiac implanted electronic device (CIED) receiving radiotherapy (RT) is challenging and requires a structured multidisciplinary approach. A consensus document is presented as a result of a multidisciplinary working group involving cardiac electrophysiologists, radiation oncologists and physicists in order to stratify the risk of patients with CIED requiring RT and approaching RT sessions appropriately. When high radiation doses and beam energy higher than 6MV are used, CIED malfunctions can occur during treatment. In our document, we reviewed the different types of RT and CIED behavior in the presence of ionizing radiations and electromagnetic interferences, from the cardiologist's, radiation oncologist's and medical physicist's point of view. We also reviewed in vitro and in vivo literature data and other national published guidelines on this issue so far. On the basis of literature data and consensus of experts, a detailed approach based on risk stratification and appropriate management of RT patients with CIEDs is suggested, with important implications for clinical practice. Copyright © 2017 Elsevier Ireland Ltd. All rights reserved.

Integrated 3D view of postmating responses by the Drosophila melanogaster female reproductive tract, obtained by micro-computed tomography scanning

PubMed Central

Mattei, Alexandra L.; Riccio, Mark L.; Avila, Frank W.; Wolfner, Mariana F.

2015-01-01

Physiological changes in females during and after mating are triggered by seminal fluid components in conjunction with female-derived molecules. In insects, these changes include increased egg production, storage of sperm, and changes in muscle contraction within the reproductive tract (RT). Such postmating changes have been studied in dissected RT tissues, but understanding their coordination in vivo requires a holistic view of the tissues and their interrelationships. Here, we used high-resolution, multiscale micro-computed tomography (CT) scans to visualize and measure postmating changes in situ in the Drosophila female RT before, during, and after mating. These studies reveal previously unidentified dynamic changes in the conformation of the female RT that occur after mating. Our results also reveal how the reproductive organs temporally shift in concert within the confines of the abdomen. For example, we observed chiral loops in the uterus and in the upper common oviduct that relax and constrict throughout sperm storage and egg movement. We found that specific seminal fluid proteins or female secretions mediate some of the postmating changes in morphology. The morphological movements, in turn, can cause further changes due to the connections among organs. In addition, we observed apparent copulatory damage to the female intima, suggesting a mechanism for entry of seminal proteins, or other exogenous components, into the female’s circulatory system. The 3D reconstructions provided by high-resolution micro-CT scans reveal how male and female molecules and anatomy interface to carry out and coordinate mating-dependent changes in the female’s reproductive physiology. PMID:26041806

Use and Assessment of Multi-Spectral Satellite Imagery in NWS Operational Forecasting Environments

NASA Technical Reports Server (NTRS)

Molthan, Andrew; Fuell, Kevin; Stano, Geoffrey; McGrath, Kevin; Schultz, Lori; LeRoy, Anita

2015-01-01

NOAA's Satellite Proving Grounds have established partnerships between product developers and NWS WFOs for the evaluation of new capabilities from the GOES-R and JPSS satellite systems. SPoRT has partnered with various WFOs to evaluate multispectral (RGB) products from MODIS, VIIRS and Himawari/AHI to prepare for GOES-R/ABI. Assisted through partnerships with GINA, UW/CIMSS, NOAA, and NASA Direct Broadcast capabilities.

Small Business Innovations

NASA Technical Reports Server (NTRS)

1992-01-01

The purpose of QASE RT is to enable system analysts and software engineers to evaluate performance and reliability implications of design alternatives. The program resulted from two Small Business Innovation Research (SBIR) projects. After receiving a description of the system architecture and workload from the user, QASE RT translates the system description into simulation models and executes them. Simulation provides detailed performance evaluation. The results of the evaluations are service and response times, offered load and device utilizations and functional availability.

A multiple-dimension liquid chromatography coupled with mass spectrometry data strategy for the rapid discovery and identification of unknown compounds from a Chinese herbal formula (Er-xian decoction).

PubMed

Wang, Caihong; Zhang, Jinlan; Wu, Caisheng; Wang, Zhe

2017-10-06

It is very important to rapidly discover and identify the multiple components of traditional Chinese medicine (TCM) formula. High performance liquid chromatography with high resolution tandem mass spectrometry (HPLC-HRMS/MS) has been widely used to analyze TCM formula and contains multiple-dimension data including retention time (RT), high resolution mass (HRMS), multiple-stage mass spectrometric (MS n ), and isotope intensity distribution (IID) data. So it is very necessary to exploit a useful strategy to utilize multiple-dimension data to rapidly probe structural information and identify chemical compounds. In this study, a new strategy to initiatively use the multiple-dimension LC-MS data has been developed to discover and identify unknown compounds of TCM in many styles. The strategy guarantees the fast discovery of candidate structural information and provides efficient structure clues for identification. The strategy contains four steps in sequence: (1) to discover potential compounds and obtain sub-structure information by the mass spectral tree similarity filter (MTSF) technique, based on HRMS and MS n data; (2) to classify potential compounds into known chemical classes by discriminant analysis (DA) on the basis of RT and HRMS data; (3) to hit the candidate structural information of compounds by intersection sub-structure between MTSF and DA (M,D-INSS); (4) to annotate and confirm candidate structures by IID data. This strategy allowed for the high exclusion efficiency (greater than 41%) of irrelevant ions in er-xian decoction (EXD) while providing accurate structural information of 553 potential compounds and identifying 66 candidates, therefore accelerating and simplifying the discovery and identification of unknown compounds in TCM formula. Copyright © 2017 Elsevier B.V. All rights reserved.

Device, Algorithm and Integrated Modeling Research for Performance-Drive Multi-Modal Optical Sensors

DTIC Science & Technology

2012-12-17

to!feature!aided!tracking! using !spectral! information .! ! !iii! •! A!novel!technique!for!spectral!waveband!selection!was!developed!and! used !as! part! of ... of !spectral! information ! using !the!tunable!single;pixel!spectrometer!concept.! •! A! database! was! developed! of ! spectral! reflectance! measurements...exploring! the! utility! of ! spectral! and! polarimetric! information !to!help!with!the!vehicle!tracking!application.!Through!the! use ! of ! both

Multi-spectral digital holographic microscopy for enhanced quantitative phase imaging of living cells

NASA Astrophysics Data System (ADS)

Kemper, Björn; Kastl, Lena; Schnekenburger, Jürgen; Ketelhut, Steffi

2018-02-01

Main restrictions of using laser light in digital holographic microscopy (DHM) are coherence induced noise and parasitic reflections in the experimental setup which limit resolution and measurement accuracy. We explored, if coherence properties of partial coherent light sources can be generated synthetically utilizing spectrally tunable lasers. The concept of the method is demonstrated by label-free quantitative phase imaging of living pancreatic tumor cells and utilizing an experimental configuration including a commercial microscope and a laser source with a broad tunable spectral range of more than 200 nm.

Real-Time 3-Dimensional Echocardiographic Assessment of Effective Regurgitant Orifice Area in Dogs With Myxomatous Mitral Valve Disease.

PubMed

Tidholm, A; Bodegård-Westling, A; Höglund, K; Häggström, J; Ljungvall, I

2017-03-01

Effective regurgitant orifice area (EROA), calculated from the vena contracta width (VCW) as the narrowest portion of the proximal regurgitant jet, might be used to estimate severity of mitral regurgitation. However, this simplified assumption only holds when the EROA is circular, which might not be true in dogs with myxomatous mitral valve disease (MMVD). Effective regurgitant orifice area in dogs with MMVD is noncircular, and using color Doppler real-time 3-dimensional (RT3D) echocardiography, measured EROA in the en face view will be significantly different from calculated EROA. Hundred and fifty-eight privately owned dogs with naturally occurring MMVD. Prospective observational study comparing en face view of EROA with calculated EROA using VCW in 4-chamber (4Ch) and 2-chamber (2Ch) view only or combined 4Ch and 2Ch views using RT3D echocardiography. The calculated EROA using the 2Ch view showed a systematic underestimation of 17% compared with the measured en face EROA corrected for body surface area. The calculated EROA using 4Ch and 4Ch + 2Ch views showed less agreement with the en face EROA, and the difference between methods increased with increasing EROA. The difference between calculated and measured EROA showed a systematic underestimation of the calculated EROA by 36% (4Ch) and 33% (4Ch + 2Ch), respectively, compared to measured en face EROA. When replacing measured EROA with calculated EROA using VCW measurements, the 2Ch view is preferred in dogs with MMVD. Copyright © 2017 The Authors. Journal of Veterinary Internal Medicine published by Wiley Periodicals, Inc. on behalf of the American College of Veterinary Internal Medicine.

NASA's Advancements in Space-Based Spectrometry Lead to Improvements in Weather Prediction and Understanding of Climate Processes

NASA Technical Reports Server (NTRS)

Susskind, Joel; Iredell, Lena

2010-01-01

AIRS (Atmospheric Infra-Red Sounder), was launched, in conjunction with AMSU-A (Advanced Microwave Sounding Unit-A) on the NASA polar orbiting research satellite EOS (Earth Observing System) Aqua satellite in May 2002 as a next generation atmospheric sounding system. Atmospheric sounders provide information primarily about the vertical distribution of atmospheric temperature and water vapor distribution. This is achieved by measuring outgoing radiation in discrete channels (spectral intervals) which are sensitive primarily to variations of these geophysical parameters. The primary objectives of AIRS/AMSU were to utilize such information in order to improve the skill of numerical weather prediction as well as to measure climate variability and trends. AIRS is a multi-detector array grating spectrometer with 2378 channels covering the spectral range 650/cm (15 microns) to 2660/cm (3.6 microns) with a resolving power (i/a i) of roughly 1200 where a i is the spectral channel bandpass. Atmospheric temperature profile can be determined from channel observations taken within the 15 micron (the long-wave CO2 absorption band) and within the 4.2 micron (the short-wave CO2 absorption band). Radiances in these (and all other) spectral intervals in the infrared are also sensitive to the presence of clouds in the instrument?s field of view (FOV), which are present about 95% of the time. AIRS was designed so as to allow for the ability to produce accurate Quality Controlled atmospheric soundings under most cloud conditions. This was achieved by having 1) extremely low channel noise values in the shortwave portion of the spectrum and 2) a very flat spatial response function within a channel?s FOV. IASI, the high spectral resolution IR interferometer flying on the European METOP satellite, does not contain either of these important characteristics. The AIRS instrument was also designed to be extremely stabile with regard to its spectral radiometric characteristics, which is critical with regard to the ability to measure accurate long term trends.

Evaluating the portability of satellite derived chlorophyll-a algorithms for temperate inland lakes using airborne hyperspectral imagery and dense surface observations.

PubMed

Johansen, Richard; Beck, Richard; Nowosad, Jakub; Nietch, Christopher; Xu, Min; Shu, Song; Yang, Bo; Liu, Hongxing; Emery, Erich; Reif, Molly; Harwood, Joseph; Young, Jade; Macke, Dana; Martin, Mark; Stillings, Garrett; Stumpf, Richard; Su, Haibin

2018-06-01

This study evaluated the performances of twenty-nine algorithms that use satellite-based spectral imager data to derive estimates of chlorophyll-a concentrations that, in turn, can be used as an indicator of the general status of algal cell densities and the potential for a harmful algal bloom (HAB). The performance assessment was based on making relative comparisons between two temperate inland lakes: Harsha Lake (7.99 km 2 ) in Southwest Ohio and Taylorsville Lake (11.88 km 2 ) in central Kentucky. Of interest was identifying algorithm-imager combinations that had high correlation with coincident chlorophyll-a surface observations for both lakes, as this suggests portability for regional HAB monitoring. The spectral data utilized to estimate surface water chlorophyll-a concentrations were derived from the airborne Compact Airborne Spectral Imager (CASI) 1500 hyperspectral imager, that was then used to derive synthetic versions of currently operational satellite-based imagers using spatial resampling and spectral binning. The synthetic data mimics the configurations of spectral imagers on current satellites in earth's orbit including, WorldView-2/3, Sentinel-2, Landsat-8, Moderate-resolution Imaging Spectroradiometer (MODIS), and Medium Resolution Imaging Spectrometer (MERIS). High correlations were found between the direct measurement and the imagery-estimated chlorophyll-a concentrations at both lakes. The results determined that eleven out of the twenty-nine algorithms were considered portable, with r 2 values greater than 0.5 for both lakes. Even though the two lakes are different in terms of background water quality, size and shape, with Taylorsville being generally less impaired, larger, but much narrower throughout, the results support the portability of utilizing a suite of certain algorithms across multiple sensors to detect potential algal blooms through the use of chlorophyll-a as a proxy. Furthermore, the strong performance of the Sentinel-2 algorithms is exceptionally promising, due to the recent launch of the second satellite in the constellation, which will provide higher temporal resolution for temperate inland water bodies. Additionally, scripts were written for the open-source statistical software R that automate much of the spectral data processing steps. This allows for the simultaneous consideration of numerous algorithms across multiple imagers over an expedited time frame for the near real-time monitoring required for detecting algal blooms and mitigating their adverse impacts. Copyright © 2018 Elsevier B.V. All rights reserved.

Rapid microscopy measurement of very large spectral images.

PubMed

Lindner, Moshe; Shotan, Zav; Garini, Yuval

2016-05-02

The spectral content of a sample provides important information that cannot be detected by the human eye or by using an ordinary RGB camera. The spectrum is typically a fingerprint of the chemical compound, its environmental conditions, phase and geometry. Thus measuring the spectrum at each point of a sample is important for a large range of applications from art preservation through forensics to pathological analysis of a tissue section. To date, however, there is no system that can measure the spectral image of a large sample in a reasonable time. Here we present a novel method for scanning very large spectral images of microscopy samples even if they cannot be viewed in a single field of view of the camera. The system is based on capturing information while the sample is being scanned continuously 'on the fly'. Spectral separation implements Fourier spectroscopy by using an interferometer mounted along the optical axis. High spectral resolution of ~5 nm at 500 nm could be achieved with a diffraction-limited spatial resolution. The acquisition time is fairly high and takes 6-8 minutes for a sample size of 10mm x 10mm measured under a bright-field microscope using a 20X magnification.

SU-F-J-72: A Clinical Usable Integrated Contouring Quality Evaluation Software for Radiotherapy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jiang, S; Dolly, S; Cai, B

Purpose: To introduce the Auto Contour Evaluation (ACE) software, which is the clinical usable, user friendly, efficient and all-in-one toolbox for automatically identify common contouring errors in radiotherapy treatment planning using supervised machine learning techniques. Methods: ACE is developed with C# using Microsoft .Net framework and Windows Presentation Foundation (WPF) for elegant GUI design and smooth GUI transition animations through the integration of graphics engines and high dots per inch (DPI) settings on modern high resolution monitors. The industrial standard software design pattern, Model-View-ViewModel (MVVM) pattern, is chosen to be the major architecture of ACE for neat coding structure, deepmore » modularization, easy maintainability and seamless communication with other clinical software. ACE consists of 1) a patient data importing module integrated with clinical patient database server, 2) a 2D DICOM image and RT structure simultaneously displaying module, 3) a 3D RT structure visualization module using Visualization Toolkit or VTK library and 4) a contour evaluation module using supervised pattern recognition algorithms to detect contouring errors and display detection results. ACE relies on supervised learning algorithms to handle all image processing and data processing jobs. Implementations of related algorithms are powered by Accord.Net scientific computing library for better efficiency and effectiveness. Results: ACE can take patient’s CT images and RT structures from commercial treatment planning software via direct user input or from patients’ database. All functionalities including 2D and 3D image visualization and RT contours error detection have been demonstrated with real clinical patient cases. Conclusion: ACE implements supervised learning algorithms and combines image processing and graphical visualization modules for RT contours verification. ACE has great potential for automated radiotherapy contouring quality verification. Structured with MVVM pattern, it is highly maintainable and extensible, and support smooth connections with other clinical software tools.« less

Early Transition and Use of VIIRS and GOES-R Products by NWS Forecast Offices

NASA Technical Reports Server (NTRS)

Fuell, Kevin K.; Smith, Mathew; Jedlovec, Gary

2012-01-01

The Visible Infrared Imaging Radiometer Suite (VIIRS) on the NPOESS Preparatory Project (NPP) satellite, part of the Joint Polar Satellite System (JPSS), and the ABI and GLM sensors scheduled for the GOES-R geostationary satellite will bring advanced observing capabilities to the operational weather community. The NASA Short-term Prediction Research and Transition (SPoRT) project at Marshall Space Flight Center has been facilitating the use of real-time experimental and research satellite data by NWS Weather Forecast Offices (WFOs) for a number of years to demonstrate the planned capabilities of future sensors to address particular forecast challenges through improve situational awareness and short-term weather forecasts. For the NOAA GOES-R Proving Ground (PG) activity, SPoRT is developing and disseminating selected GOES-R proxy products to collaborating WFOs and National Centers. SPoRT developed the a pseudo-Geostationary Lightning Mapper product and helped in the transition of the Algorithm Working Group (AWG) Convective Initiation (CI) proxy product for the Hazardous Weather Testbed (HWT) Spring Experiment,. Along with its partner WFOs, SPoRT is evaluating MODIS/GOES Hybrid products, which brings ABI-like data sets from existing NASA instrumentation in front of the forecaster for everyday use. The Hybrid uses near real-time MODIS imagery to demonstrate future ABI capabilities, while utilizing standard GOES imagery to provide the temporal frequency of geostationary imagery expected by operational forecasters. In addition, SPoRT is collaborating with the GOES-R hydrology AWG to transition a baseline proxy product for rainfall rate / quantitative precipitation estimate (QPE) to the OCONUS regions. For VIIRS, SPoRT is demonstrating multispectral observing capabilities and the utility of low-light channels not previously available on operational weather satellites to address a variety of weather forecast challenges. This presentation will discuss the results of transitioning these products to collaborating WFOs throughout the country.

Narrow Angle Wide Spectral Range Radiometer Design FEANICS/REEFS Radiometer Design Report

NASA Technical Reports Server (NTRS)

Camperchioli, William

2005-01-01

A critical measurement for the Radiative Enhancement Effects on Flame Spread (REEFS) microgravity combustion experiment is the net radiative flux emitted from the gases and from the solid fuel bed. These quantities are measured using a set of narrow angle, wide spectral range radiometers. The radiometers are required to have an angular field of view of 1.2 degrees and measure over the spectral range of 0.6 to 30 microns, which presents a challenging design effort. This report details the design of this radiometer system including field of view, radiometer response, radiometric calculations, temperature effects, error sources, baffling and amplifiers. This report presents some radiometer specific data but does not present any REEFS experiment data.

The neurobiology of emotion regulation in posttraumatic stress disorder: Amygdala downregulation via real-time fMRI neurofeedback.

PubMed

Nicholson, Andrew A; Rabellino, Daniela; Densmore, Maria; Frewen, Paul A; Paret, Christian; Kluetsch, Rosemarie; Schmahl, Christian; Théberge, Jean; Neufeld, Richard W J; McKinnon, Margaret C; Reiss, Jim; Jetly, Rakesh; Lanius, Ruth A

2017-01-01

Amygdala dysregulation has been shown to be central to the pathophysiology of posttraumatic stress disorder (PTSD) representing a critical treatment target. Here, amygdala downregulation was targeted using real-time fMRI neurofeedback (rt-fMRI-nf) in patients with PTSD, allowing us to examine further the regulation of emotional states during symptom provocation. Patients (n = 10) completed three sessions of rt-fMRI-nf with the instruction to downregulate activation in the amygdala, while viewing personalized trauma words. Amygdala downregulation was assessed by contrasting (a) regulate trials, with (b) viewing trauma words and not attempting to regulate. Training was followed by one transfer run not involving neurofeedback. Generalized psychophysiological interaction (gPPI) and dynamic causal modeling (DCM) analyses were also computed to explore task-based functional connectivity and causal structure, respectively. It was found that PTSD patients were able to successfully downregulate both right and left amygdala activation, showing sustained effects within the transfer run. Increased activation in the dorsolateral and ventrolateral prefrontal cortex (PFC), regions related to emotion regulation, was observed during regulate as compared with view conditions. Importantly, activation in the PFC, rostral anterior cingulate cortex, and the insula, were negatively correlated to PTSD dissociative symptoms in the transfer run. Increased functional connectivity between the amygdala- and both the dorsolateral and dorsomedial PFC was found during regulate, as compared with view conditions during neurofeedback training. Finally, our DCM analysis exploring directional structure suggested that amygdala downregulation involves both top-down and bottom-up information flow with regard to observed PFC-amygdala connectivity. This is the first demonstration of successful downregulation of the amygdala using rt-fMRI-nf in PTSD, which was critically sustained in a subsequent transfer run without neurofeedback, and corresponded to increased connectivity with prefrontal regions involved in emotion regulation during the intervention. Hum Brain Mapp 38:541-560, 2017. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

Applications of the Hyper Angular Rainbow Polarimeter (HARP) instrument from aircraft and from space

NASA Astrophysics Data System (ADS)

Martins, J. V.; Fernandez Borda, R. A.; McBride, B.; Remer, L. A.; Barbosa, H. M.; Dubovik, O.

2017-12-01

The remote sensing of aerosol and cloud microphysics is essential for the global assessment of aerosol and cloud properties. Current spectral techniques utilized by MODIS, VIIRS and similar sensors lack details on the retrieval of the cloud and aerosol particle microphysical properties desired by the scientific community. Multi-spectral hyperangular polarization measurements provide enough information for this additional microphysical retrievals. The HARP (HyperAngular Rainbow Polarimeter) is a compact and modular imaging instrument with wide Field Of View (94 deg cross track and up to 114 degrees along track) and up to 60 along track viewing angles. Spectrally, HARP is envisioned to have modules in the UV, VNIR and SWIR ranges. Currently there are two existing HARP VNIR sensors, for airborne (AirHARP) and space-borne applications respectively, both with 4 wavelengths centered at 440, 550, 670, and 865nm. The space-borne HARP sensor has been designed for a 3U CubeSat satellite currently scheduled for launch to the International Space Station in January 2018 and to be released as a free flying satellite shortly after. At this orbit HARP will provide pixel resolution at the ground of about 400m, which will be binned to coarse resolutions (e.g. 2.5 Km) for data rate reduction. The AirHARP instrument has recently flown in the NASA Langley UC12 aircraft during the LMOS (Lake Michigan Ozone Study) collecting a large data set on aerosol, clouds, and surface properties. AirHARP will also fly in the ACEPOL campaign on board the NASA ER2 aircraft in October/November 2017. These campaigns are supporting HARP's algorithm development and validation in preparation to HARP's Cubesat launch and possibly other HARP space-borne missions. This presentation will describe details of the HARP and AirHARP instruments, as well and preliminary results with level 1 and level 2 data collected during the LMOS and the ACEPOL aircraft campaigns showing clouds and aerosol retrieval results.

A DICOM-RT radiation oncology ePR with decision support utilizing a quantified knowledge base from historical data

NASA Astrophysics Data System (ADS)

Documet, Jorge R.; Liu, Brent; Le, Anh; Law, Maria

2008-03-01

During the last 2 years we have been working on developing a DICOM-RT (Radiation Therapy) ePR (Electronic Patient Record) with decision support that will allow physicists and radiation oncologists during their decision-making process. This ePR allows offline treatment dose calculations and plan evaluation, while at the same time it compares and quantifies treatment planning algorithms using DICOM-RT objects. The ePR framework permits the addition of visualization, processing, and analysis tools, which combined with the core functionality of reporting, importing and exporting of medical studies, creates a very powerful application that can improve the efficiency while planning cancer treatments. Usually a Radiation Oncology department will have disparate and complex data generated by the RT modalities as well as data scattered in RT Information/Management systems, Record & Verify systems, and Treatment Planning Systems (TPS) which can compromise the efficiency of the clinical workflow since the data crucial for a clinical decision may be time-consuming to retrieve, temporarily missing, or even lost. To address these shortcomings, the ACR-NEMA Standards Committee extended its DICOM (Digital Imaging & Communications in Medicine) standard from Radiology to RT by ratifying seven DICOM RT objects starting in 1997 [1,2]. However, they are not broadly used yet by the RT community in daily clinical operations. In the past, the research focus of an RT department has primarily been developing new protocols and devices to improve treatment process and outcomes of cancer patients with minimal effort dedicated to integration of imaging and information systems. Our attempt is to show a proof-of-concept that a DICOM-RT ePR system can be developed as a foundation to perform medical imaging informatics research in developing decision-support tools and knowledge base for future data mining applications.

Enhanced control of dorsolateral prefrontal cortex neurophysiology with real-time functional magnetic resonance imaging (rt-fMRI) neurofeedback training and working memory practice.

PubMed

Sherwood, Matthew S; Kane, Jessica H; Weisend, Michael P; Parker, Jason G

2016-01-01

Real-time functional magnetic resonance imaging (rt-fMRI) neurofeedback can be used to train localized, conscious regulation of blood oxygen level-dependent (BOLD) signals. As a therapeutic technique, rt-fMRI neurofeedback reduces the symptoms of a variety of neurologic disorders. To date, few studies have investigated the use of self-regulation training using rt-fMRI neurofeedback to enhance cognitive performance. This work investigates the utility of rt-fMRI neurofeedback as a tool to enhance human cognition by training healthy individuals to consciously control activity in the left dorsolateral prefrontal cortex (DLPFC). A cohort of 18 healthy participants in the experimental group underwent rt-fMRI neurofeedback from the left DLPFC in five training sessions across two weeks while 7 participants in the control group underwent similar training outside the MRI and without rt-fMRI neurofeedback. Working memory (WM) performance was evaluated on two testing days separated by the five rt-fMRI neurofeedback sessions using two computerized tests. We investigated the ability to control the BOLD signal across training sessions and WM performance across the two testing days. The group with rt-fMRI neurofeedback demonstrated a significant increase in the ability to self-regulate the BOLD signal in the left DLPFC across sessions. WM performance showed differential improvement between testing days one and two across the groups with the highest increases observed in the rt-fMRI neurofeedback group. These results provide evidence that individuals can quickly gain the ability to consciously control the left DLPFC, and this training results in improvements of WM performance beyond that of training alone. Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

Development of a Model to Correct Multi-View Angle above Water Measurements for the Analysis of the Bidirectional Reflectance of Coral and Other Reef Substrates

NASA Astrophysics Data System (ADS)

Miller, I.; Forster, B. C.; Laffan, S. W.

2012-07-01

Spectral reflectance characteristics of substrates in a coral reef environment are often measured in the field by viewing a substrate at nadir. However, viewing a substrate from multiple angles would likely result in different spectral characteristics for most coral reef substrates and provide valuable information on structural properties. To understand the relationship between the morphology of a substrate and its spectral response it is necessary to correct the observed above-water radiance for the effects of atmosphere and water attenuation, at a number of view and azimuth angles. In this way the actual surface reflectance can be determined. This research examines the air-water surface interaction for two hypothetical atmospheric conditions (clear Rayleigh scattering and totally cloudcovered) and the global irradiance reaching the benthic surface. It accounts for both water scattering and absorption, with simplifications for shallow water conditions, as well as the additive effect of background reflectance being reflected at the water-air surface at angles greater than the critical refraction angle (~48°). A model was developed to correct measured above-water radiance along the refracted view angle for its decrease due to path attenuation and the "n squared law of radiance" and the additive surface reflectance. This allows bidirectional benthic surface reflectance and nadir-normalised reflectance to be determined. These theoretical models were adapted to incorporate above-water measures relative to a standard, diffuse, white reference panel. The derived spectral signatures of a number of coral and non-coral benthic surfaces compared well with other published results, and the signatures and nadir normalised reflectance of the corals and other benthic surface classes indicate good class separation.

A review of materials for spectral design coatings in signature management applications

NASA Astrophysics Data System (ADS)

Andersson, Kent E.; Škerlind, Christina

2014-10-01

The current focus in Swedish policy towards national security and high-end technical systems, together with a rapid development in multispectral sensor technology, adds to the utility of developing advanced materials for spectral design in signature management applications. A literature study was performed probing research databases for advancements. Qualitative text analysis was performed using a six-indicator instrument: spectrally selective reflectance; low gloss; low degree of polarization; low infrared emissivity; non-destructive properties in radar and in general controllability of optical properties. Trends are identified and the most interesting materials and coating designs are presented with relevant performance metrics. They are sorted into categories in the order of increasing complexity: pigments and paints, one-dimensional structures, multidimensional structures (including photonic crystals), and lastly biomimic and metamaterials. The military utility of the coatings is assessed qualitatively. The need for developing a framework for assessing the military utility of incrementally increasing the performance of spectrally selective coatings is identified.

Cell-phone vs microphone recordings: Judging emotion in the voice.

PubMed

Green, Joshua J; Eigsti, Inge-Marie

2017-09-01

Emotional states can be conveyed by vocal cues such as pitch and intensity. Despite the ubiquity of cellular telephones, there is limited information on how vocal emotional states are perceived during cell-phone transmissions. Emotional utterances (neutral, happy, angry) were elicited from two female talkers and simultaneously recorded via microphone and cell-phone. Ten-step continua (neutral to happy, neutral to angry) were generated using the straight algorithm. Analyses compared reaction time (RT) and emotion judgment as a function of recording type (microphone vs cell-phone). Logistic regression revealed no judgment differences between recording types, though there were interactions with emotion type. Multi-level model analyses indicated that RT data were best fit by a quadratic model, with slower RT at the middle of each continuum, suggesting greater ambiguity, and slower RT for cell-phone stimuli across blocks. While preliminary, results suggest that critical acoustic cues to emotion are largely retained in cell-phone transmissions, though with effects of recording source on RT, and support the methodological utility of collecting speech samples by phone.

Global Composite

Atmospheric Science Data Center

2013-04-19

article title:  MISR Global Images See the Light of Day     View Larger Image ... camera and combines data from the red, green and blue spectral bands to create a natural color image. The central view combines ...

Evaluation of the utility of a rapid test for syphilis at a sexually transmitted disease clinic in Buenos Aires, Argentina.

PubMed

Gallo Vaulet, Lucía; Morando, Nicolás; Casco, Ricardo; Melgar, Asunta; Nacher, Silvia; Rodríguez Fermepin, Marcelo; Pando, María A

2018-05-15

Even though syphilis can be easily diagnosed by simple and low-cost laboratory methods, it continues to be an important health problem. Rapid tests (RT) for the detection of treponemal antibodies can facilitate earlier diagnosis, access to treatment and linkage to care. The aim of this study was to analyse the usefulness of the incorporation of a RT in the detection of patients infected with T. pallidum in a sexually-transmitted disease (STD) clinic. Between March and December 2015, a syphilis RT was offered to patients who spontaneously attended the clinic. Conventional serology testing was additionally indicated to every participant. The RT for syphilis was offered to 1887 patients, of whom 31.1% agreed to get tested. VDRL test was performed in 84.0% of patients that were also tested with syphilis RT, with a significantly higher frequency observed among participants with reactive RT (94.3% vs. 79.8%, p < 0.001). These results showed that 33.7% of the participants were reactive for the RT and 27.0% were reactive for the VDRL test. Both tests were reactive in 24.9% and non-reactive in 64.3%. A high prevalence of active syphilis was detected in patients attending the clinic. The use of a syphilis RT had a positive impact, which in combination with the VDRL test increased the number of patients that were effectively diagnosed.

The Moon Mineralogy Mapper (M3) imaging spectrometer for lunar science: Instrument description, calibration, on-orbit measurements, science data calibration and on-orbit validation

USGS Publications Warehouse

Green, R.O.; Pieters, C.; Mouroulis, P.; Eastwood, M.; Boardman, J.; Glavich, T.; Isaacson, P.; Annadurai, M.; Besse, S.; Barr, D.; Buratti, B.; Cate, D.; Chatterjee, A.; Clark, R.; Cheek, L.; Combe, J.; Dhingra, D.; Essandoh, V.; Geier, S.; Goswami, J.N.; Green, R.; Haemmerle, V.; Head, J.; Hovland, L.; Hyman, S.; Klima, R.; Koch, T.; Kramer, G.; Kumar, A.S.K.; Lee, Kenneth; Lundeen, S.; Malaret, E.; McCord, T.; McLaughlin, S.; Mustard, J.; Nettles, J.; Petro, N.; Plourde, K.; Racho, C.; Rodriquez, J.; Runyon, C.; Sellar, G.; Smith, C.; Sobel, H.; Staid, M.; Sunshine, J.; Taylor, L.; Thaisen, K.; Tompkins, S.; Tseng, H.; Vane, G.; Varanasi, P.; White, M.; Wilson, D.

2011-01-01

The NASA Discovery Moon Mineralogy Mapper imaging spectrometer was selected to pursue a wide range of science objectives requiring measurement of composition at fine spatial scales over the full lunar surface. To pursue these objectives, a broad spectral range imaging spectrometer with high uniformity and high signal-to-noise ratio capable of measuring compositionally diagnostic spectral absorption features from a wide variety of known and possible lunar materials was required. For this purpose the Moon Mineralogy Mapper imaging spectrometer was designed and developed that measures the spectral range from 430 to 3000 nm with 10 nm spectral sampling through a 24 degree field of view with 0.7 milliradian spatial sampling. The instrument has a signal-to-noise ratio of greater than 400 for the specified equatorial reference radiance and greater than 100 for the polar reference radiance. The spectral cross-track uniformity is >90% and spectral instantaneous field-of-view uniformity is >90%. The Moon Mineralogy Mapper was launched on Chandrayaan-1 on the 22nd of October. On the 18th of November 2008 the Moon Mineralogy Mapper was turned on and collected a first light data set within 24 h. During this early checkout period and throughout the mission the spacecraft thermal environment and orbital parameters varied more than expected and placed operational and data quality constraints on the measurements. On the 29th of August 2009, spacecraft communication was lost. Over the course of the flight mission 1542 downlinked data sets were acquired that provide coverage of more than 95% of the lunar surface. An end-to-end science data calibration system was developed and all measurements have been passed through this system and delivered to the Planetary Data System (PDS.NASA.GOV). An extensive effort has been undertaken by the science team to validate the Moon Mineralogy Mapper science measurements in the context of the mission objectives. A focused spectral, radiometric, spatial, and uniformity validation effort has been pursued with selected data sets including an Earth-view data set. With this effort an initial validation of the on-orbit performance of the imaging spectrometer has been achieved, including validation of the cross-track spectral uniformity and spectral instantaneous field of view uniformity. The Moon Mineralogy Mapper is the first imaging spectrometer to measure a data set of this kind at the Moon. These calibrated science measurements are being used to address the full set of science goals and objectives for this mission. Copyright 2011 by the American Geophysical Union.

The Moon Mineralogy Mapper (M3) imaging spectrometerfor lunar science: Instrument description, calibration, on‐orbit measurements, science data calibration and on‐orbit validation

USGS Publications Warehouse

C. Pieters,; P. Mouroulis,; M. Eastwood,; J. Boardman,; Green, R.O.; Glavich, T.; Isaacson, P.; Annadurai, M.; Besse, S.; Cate, D.; Chatterjee, A.; Clark, R.; Barr, D.; Cheek, L.; Combe, J.; Dhingra, D.; Essandoh, V.; Geier, S.; Goswami, J.N.; Green, R.; Haemmerle, V.; Head, J.; Hovland, L.; Hyman, S.; Klima, R.; Koch, T.; Kramer, G.; Kumar, A.S.K.; Lee, K.; Lundeen, S.; Malaret, E.; McCord, T.; McLaughlin, S.; Mustard, J.; Nettles, J.; Petro, N.; Plourde, K.; Racho, C.; Rodriguez, J.; Runyon, C.; Sellar, G.; Smith, C.; Sobel, H.; Staid, M.; Sunshine, J.; Taylor, L.; Thaisen, K.; Tompkins, S.; Tseng, H.; Vane, G.; Varanasi, P.; White, M.; Wilson, D.

2011-01-01

The NASA Discovery Moon Mineralogy Mapper imaging spectrometer was selected to pursue a wide range of science objectives requiring measurement of composition at fine spatial scales over the full lunar surface. To pursue these objectives, a broad spectral range imaging spectrometer with high uniformity and high signal-to-noise ratio capable of measuring compositionally diagnostic spectral absorption features from a wide variety of known and possible lunar materials was required. For this purpose the Moon Mineralogy Mapper imaging spectrometer was designed and developed that measures the spectral range from 430 to 3000 nm with 10 nm spectral sampling through a 24 degree field of view with 0.7 milliradian spatial sampling. The instrument has a signal-to-noise ratio of greater than 400 for the specified equatorial reference radiance and greater than 100 for the polar reference radiance. The spectral cross-track uniformity is >90% and spectral instantaneous field-of-view uniformity is >90%. The Moon Mineralogy Mapper was launched on Chandrayaan-1 on the 22nd of October. On the 18th of November 2008 the Moon Mineralogy Mapper was turned on and collected a first light data set within 24 h. During this early checkout period and throughout the mission the spacecraft thermal environment and orbital parameters varied more than expected and placed operational and data quality constraints on the measurements. On the 29th of August 2009, spacecraft communication was lost. Over the course of the flight mission 1542 downlinked data sets were acquired that provide coverage of more than 95% of the lunar surface. An end-to-end science data calibration system was developed and all measurements have been passed through this system and delivered to the Planetary Data System (PDS.NASA.GOV). An extensive effort has been undertaken by the science team to validate the Moon Mineralogy Mapper science measurements in the context of the mission objectives. A focused spectral, radiometric, spatial, and uniformity validation effort has been pursued with selected data sets including an Earth-view data set. With this effort an initial validation of the on-orbit performance of the imaging spectrometer has been achieved, including validation of the cross-track spectral uniformity and spectral instantaneous field of view uniformity. The Moon Mineralogy Mapper is the first imaging spectrometer to measure a data set of this kind at the Moon. These calibrated science measurements are being used to address the full set of science goals and objectives for this mission.

Asthma disease management and the respiratory therapist.

PubMed

Kallstrom, Thomas J; Myers, Timothy R

2008-06-01

The role of the respiratory therapist (RT) is expanding with the growing acceptance and use of the disease-management paradigm for managing chronic diseases. RTs are key members of the asthma disease-management team, in acute-care settings, patients' homes, out-patient clinics, emergency departments, and in the community. Utilizing RTs as disease managers allows patients to be treated faster and more appropriately, discharged to home sooner, and decreases hospital admissions. RT are leaders in the emerging field of asthma disease management.

Spectral and spread-spectral teleportation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Humble, Travis S.

2010-06-15

We report how quantum information encoded into the spectral degree of freedom of a single-photon state may be teleported using a finite spectrally entangled biphoton state. We further demonstrate how the bandwidth of the teleported wave form can be controllably and coherently dilated using a spread-spectral variant of teleportation. We calculate analytical expressions for the fidelities of spectral and spread-spectral teleportation when complex-valued Gaussian states are transferred using a proposed experimental approach. Finally, we discuss the utility of these techniques for integrating broad-bandwidth photonic qubits with narrow-bandwidth receivers in quantum communication systems.

A novel and compact spectral imaging system based on two curved prisms

NASA Astrophysics Data System (ADS)

Nie, Yunfeng; Bin, Xiangli; Zhou, Jinsong; Li, Yang

2013-09-01

As a novel detection approach which simultaneously acquires two-dimensional visual picture and one-dimensional spectral information, spectral imaging offers promising applications on biomedical imaging, conservation and identification of artworks, surveillance of food safety, and so forth. A novel moderate-resolution spectral imaging system consisting of merely two optical elements is illustrated in this paper. It can realize the function of a relay imaging system as well as a 10nm spectral resolution spectroscopy. Compared to conventional prismatic imaging spectrometers, this design is compact and concise with only two special curved prisms by utilizing two reflective surfaces. In contrast to spectral imagers based on diffractive grating, the usage of compound-prism possesses characteristics of higher energy utilization and wider free spectral range. The seidel aberration theory and dispersive principle of this special prism are analyzed at first. According to the results, the optical system of this design is simulated, and the performance evaluation including spot diagram, MTF and distortion, is presented. In the end, considering the difficulty and particularity of manufacture and alignment, an available method for fabrication and measurement is proposed.

How does c-view image quality compare with conventional 2D FFDM?

PubMed

Nelson, Jeffrey S; Wells, Jered R; Baker, Jay A; Samei, Ehsan

2016-05-01

The FDA approved the use of digital breast tomosynthesis (DBT) in 2011 as an adjunct to 2D full field digital mammography (FFDM) with the constraint that all DBT acquisitions must be paired with a 2D image to assure adequate interpretative information is provided. Recently manufacturers have developed methods to provide a synthesized 2D image generated from the DBT data with the hope of sparing patients the radiation exposure from the FFDM acquisition. While this much needed alternative effectively reduces the total radiation burden, differences in image quality must also be considered. The goal of this study was to compare the intrinsic image quality of synthesized 2D c-view and 2D FFDM images in terms of resolution, contrast, and noise. Two phantoms were utilized in this study: the American College of Radiology mammography accreditation phantom (ACR phantom) and a novel 3D printed anthropomorphic breast phantom. Both phantoms were imaged using a Hologic Selenia Dimensions 3D system. Analysis of the ACR phantom includes both visual inspection and objective automated analysis using in-house software. Analysis of the 3D anthropomorphic phantom includes visual assessment of resolution and Fourier analysis of the noise. Using ACR-defined scoring criteria for the ACR phantom, the FFDM images scored statistically higher than c-view according to both the average observer and automated scores. In addition, between 50% and 70% of c-view images failed to meet the nominal minimum ACR accreditation requirements-primarily due to fiber breaks. Software analysis demonstrated that c-view provided enhanced visualization of medium and large microcalcification objects; however, the benefits diminished for smaller high contrast objects and all low contrast objects. Visual analysis of the anthropomorphic phantom showed a measureable loss of resolution in the c-view image (11 lp/mm FFDM, 5 lp/mm c-view) and loss in detection of small microcalcification objects. Spectral analysis of the anthropomorphic phantom showed higher total noise magnitude in the FFDM image compared with c-view. Whereas the FFDM image contained approximately white noise texture, the c-view image exhibited marked noise reduction at midfrequency and high frequency with far less noise suppression at low frequencies resulting in a mottled noise appearance. Their analysis demonstrates many instances where the c-view image quality differs from FFDM. Compared to FFDM, c-view offers a better depiction of objects of certain size and contrast, but provides poorer overall resolution and noise properties. Based on these findings, the utilization of c-view images in the clinical setting requires careful consideration, especially if considering the discontinuation of FFDM imaging. Not explicitly explored in this study is how the combination of DBT + c-view performs relative to DBT + FFDM or FFDM alone.

The Elusive Soft Emission from Hard X-ray Symbiotic System RT Cru

NASA Astrophysics Data System (ADS)

Karovska, Margarita

2014-09-01

RT Cru is a fascinating member of a new class of hard X-ray emitting symbiotic binaries showing X-ray emission extending to over 50keV. While its hard X-ray emission has been studied in detail, the soft component of the spectrum, including flares, remains elusive, since previous observations have focused on the high-energy regime. We propose Chandra HRC-S/LETG observations to determine the spatial, spectral, and temporal characteristics of the source of the soft X-ray emission with a goal to establish the origin of the soft component, and determine whether and how it is tied to the hard component. Determining the origin of the soft emission is a crucial piece of the puzzle to understanding the geometry, energetics, and the environment of WD accretion in this class of symbiotic systems.

TU-FG-209-12: Treatment Site and View Recognition in X-Ray Images with Hierarchical Multiclass Recognition Models

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chang, X; Mazur, T; Yang, D

Purpose: To investigate an approach of automatically recognizing anatomical sites and imaging views (the orientation of the image acquisition) in 2D X-ray images. Methods: A hierarchical (binary tree) multiclass recognition model was developed to recognize the treatment sites and views in x-ray images. From top to bottom of the tree, the treatment sites are grouped hierarchically from more general to more specific. Each node in the hierarchical model was designed to assign images to one of two categories of anatomical sites. The binary image classification function of each node in the hierarchical model is implemented by using a PCA transformationmore » and a support vector machine (SVM) model. The optimal PCA transformation matrices and SVM models are obtained by learning from a set of sample images. Alternatives of the hierarchical model were developed to support three scenarios of site recognition that may happen in radiotherapy clinics, including two or one X-ray images with or without view information. The performance of the approach was tested with images of 120 patients from six treatment sites – brain, head-neck, breast, lung, abdomen and pelvis – with 20 patients per site and two views (AP and RT) per patient. Results: Given two images in known orthogonal views (AP and RT), the hierarchical model achieved a 99% average F1 score to recognize the six sites. Site specific view recognition models have 100 percent accuracy. The computation time to process a new patient case (preprocessing, site and view recognition) is 0.02 seconds. Conclusion: The proposed hierarchical model of site and view recognition is effective and computationally efficient. It could be useful to automatically and independently confirm the treatment sites and views in daily setup x-ray 2D images. It could also be applied to guide subsequent image processing tasks, e.g. site and view dependent contrast enhancement and image registration. The senior author received research grants from ViewRay Inc. and Varian Medical System.« less

Comparing efficacy of reduced-toxicity allogeneic hematopoietic cell transplantation with conventional chemo-(immuno) therapy in patients with relapsed or refractory CLL: a Markov decision analysis.

PubMed

Kharfan-Dabaja, M A; Pidala, J; Kumar, A; Terasawa, T; Djulbegovic, B

2012-09-01

Despite therapeutic advances, relapsed/refractory CLL, particularly after fludarabine-based regimens, remains a major challenge for which optimal therapy is undefined. No randomized comparative data exist to suggest the superiority of reduced-toxicity allogeneic hematopoietic cell transplantation (RT-allo-HCT) over conventional chemo-(immuno) therapy (CCIT). By using estimates from a systematic review and by meta-analysis of available published evidence, we constructed a Markov decision model to examine these competing modalities. Cohort analysis demonstrated superior outcome for RT-allo-HCT, with a 10-month overall life expectancy (and 6-month quality-adjusted life expectancy (QALE)) advantage over CCIT. Although the model was sensitive to changes in base-case assumptions and transition probabilities, RT-allo-HCT provided superior overall life expectancy through a range of values supported by the meta-analysis. QALE was superior for RT-allo-HCT compared with CCIT. This conclusion was sensitive to change in the anticipated state utility associated with the post-allogeneic HCT state; however, RT-allo-HCT remained the optimal strategy for values supported by existing literature. This analysis provides a quantitative comparison of outcomes between RT-allo-HCT and CCIT for relapsed/refractory CLL in the absence of randomized comparative trials. Confirmation of these findings requires a prospective randomized trial, which compares the most effective RT-allo-HCT and CCIT regimens for relapsed/refractory CLL.

Large institutional variations in use of androgen deprivation therapy with definitive radiotherapy in a population-based cohort of men with intermediate- and high-risk prostate cancer.

PubMed

Ong, Wee Loon; Foroudi, Farshad; Evans, Sue; Millar, Jeremy

2017-11-01

To evaluate the pattern of use of androgen deprivation therapy (ADT) with definitive radiotherapy (RT) in men with prostate cancer (PCa) in a population-based study in Australia. This is a prospective cohort of men with intermediate- and high-risk PCa, captured in the population-based Prostate Cancer Outcome Registry Victoria, who were treated with definitive prostate RT between January 2010 and December 2015. The primary outcome of interest was ADT utilization. Chi-squared test for trend was used to evaluate the temporal trend in the use of ADT over the study period. Multivariate logistic regressions were used to evaluate the effects of patient-, tumour- and treatment-related factors, and treatment institutions (public/ private and metropolitan/ regional) on the likelihood of ADT utilization. A total of 1806 men were included in the study, 199 of whom (11%) had favourable National Comprehensive Cancer Network (NCCN) intermediate-risk disease (i.e. only one intermediate-risk feature, primary Gleason grade 3, and <50% biopsy core involved), 687 (38%) had unfavourable NCCN intermediate-risk disease, and 920 (51%) had high-risk disease. Of the 1806 men, 1155 (64%) received ADT with RT. Men with NCCN high-risk PCa (84%) were more likely to have ADT than men with favourable NCCN intermediate-risk (32%) and unfavourable NCCN intermediate-risk (46%) PCa (P < 0.001). Men treated in public institutions (66%, vs 47% in private institutions; P < 0.001) and regional centres (78%, vs 59% in metropolitan institutions; P < 0.001) were more likely to receive ADT. There was a trend towards an increase in ADT utilization from 50% in 2010 to 64% in 2015 (P < 0.001). In multivariate analyses (adjusting for age, tumour-related factors, year of treatment and use of brachytherapy boost), treatment institution (public and regional) remained independently associated with increased likelihood of ADT utilization. Men with intermediate-risk PCa treated in regional and public institutions were 2.7 times (95% confidence interval [CI] 1.9-3.9; P < 0.001) and 2.8 times (95% CI 1.4-5.3; P = 0.002), more likely to receive ADT with RT, respectively, while men with high-risk PCa treated in regional and public institutions were 3.1 times (95% CI 1.7-5.7; P < 0.001) and 3.0 times (95% CI 1.7-5.4; P < 0.001), more likely to receive ADT with RT, respectively. This is the largest Australasian contemporary series reporting on the pattern of use of ADT with definitive prostate RT. While there was an increasing trend towards use of ADT over time, ADT still appeared to be underutilized in certain groups of patients who may benefit from ADT, with approximately one in five men with high-risk and one in two with unfavourable intermediate-risk PCa not receiving ADT with RT. There was notable variation in the use of ADT between public vs private and metropolitan vs regional institutions. © 2017 The Authors BJU International © 2017 BJU International Published by John Wiley & Sons Ltd.

A reverberation-time-aware DNN approach leveraging spatial information for microphone array dereverberation

NASA Astrophysics Data System (ADS)

Wu, Bo; Yang, Minglei; Li, Kehuang; Huang, Zhen; Siniscalchi, Sabato Marco; Wang, Tong; Lee, Chin-Hui

2017-12-01

A reverberation-time-aware deep-neural-network (DNN)-based multi-channel speech dereverberation framework is proposed to handle a wide range of reverberation times (RT60s). There are three key steps in designing a robust system. First, to accomplish simultaneous speech dereverberation and beamforming, we propose a framework, namely DNNSpatial, by selectively concatenating log-power spectral (LPS) input features of reverberant speech from multiple microphones in an array and map them into the expected output LPS features of anechoic reference speech based on a single deep neural network (DNN). Next, the temporal auto-correlation function of received signals at different RT60s is investigated to show that RT60-dependent temporal-spatial contexts in feature selection are needed in the DNNSpatial training stage in order to optimize the system performance in diverse reverberant environments. Finally, the RT60 is estimated to select the proper temporal and spatial contexts before feeding the log-power spectrum features to the trained DNNs for speech dereverberation. The experimental evidence gathered in this study indicates that the proposed framework outperforms the state-of-the-art signal processing dereverberation algorithm weighted prediction error (WPE) and conventional DNNSpatial systems without taking the reverberation time into account, even for extremely weak and severe reverberant conditions. The proposed technique generalizes well to unseen room size, array geometry and loudspeaker position, and is robust to reverberation time estimation error.

Massive star formation at high spatial resolution

NASA Astrophysics Data System (ADS)

Pascucci, Ilaria

2004-05-01

This thesis studies the early phases of massive stars and their impact on the surrounding. The capabilities of continuum radiative transfer (RT) codes to interpret the observations are also investigated. The main results of this work are: 1) Two massive star-forming regions are observed in the infrared. The thermal emission from the ultra-compact H II regions is resolved and the spectral type of the ionizing stars is estimated. The hot cores are not detected thus implying line-of-sight extinction larger than 200 visual magnitude. 2) The first mid-infrared interferometric measurements towards a young massive star resolve thermal emission on scales of 30-50 AU probing the size of the predicted disk. The visibility curve differs from those of intermediate-mass stars. 3) The close vicinity of Θ1C Ori are imaged using the NACO adaptive optics system. The binary proplyd Orion 168-326 and its interaction with the wind from Θ1C Ori are resolved. A proplyd uniquely seen face-on is also identified. 4) Five RT codes are compared in a disk configuration. The solutions provide the first 2D benchmark and serve to test the reliability of other RT codes. The images/visibilities from two RT codes are compared for a distorted disk. The parameter range in which such a distortion is detectable with MIDI is explored.

Spectral irradiance standard for the ultraviolet - The deuterium lamp

NASA Technical Reports Server (NTRS)

Saunders, R. D.; Ott, W. R.; Bridges, J. M.

1978-01-01

A set of deuterium lamps is calibrated as spectral irradiance standards in the 200-350-nm spectral region utilizing both a high accuracy tungsten spectral irradiance standard and a newly developed argon mini-arc spectral radiance standard. The method which enables a transfer from a spectral radiance to a spectral irradiance standard is described. The following characteristics of the deuterium lamp irradiance standard are determined: sensitivity to alignment; dependence on input power and solid angle; reproducibility; and stability. The absolute spectral radiance is also measured in the 167-330-nm region. Based upon these measurements, values of the spectral irradiance below 200 nm are obtained through extrapolation.

Rapid Access Real-Time device and Rapid Access software: new tools in the armamentarium of capsule endoscopy.

PubMed

Spada, Cristiano; Riccioni, Maria Elena; Costamagna, Guido

2007-07-01

Small bowel capsule endoscopy represents a significant advance in the investigation of the small bowel, allowing direct visualization of this section of the gastrointestinal system. More recently, new video capsules have been released, specifically designed to investigate the esophagus and the colon. In June 2006, Given Imaging Ltd received marketing clearance from the US FDA for the Rapid Access Real-Time (RT) and Rapid Access software. The Rapid Access RT is a handheld device that enables real-time viewing during capsule endoscopy procedures. To date, the clinical benefits of this device are unknown as studies on the Rapid Access RT system have not yet been published. However, it appears that the Rapid Access RT system may reduce the examination and reading time, and may impact significantly in cases where it is important to know the precise localization of the capsule (during PillCam ESO ingestion procedures, PillCam Colon examinations or when delayed gastric transit is suspected) or in case of severe gastrointestinal bleeding (when a therapeutic procedure is required urgently).

Vesta and the HED Meteorites: Comparison of Spectral Properties

NASA Technical Reports Server (NTRS)

Ammannito, E.; De Sanctis, M. C.; Fonte, S.; Magni, G.; Capaccioni, F.; Tosi, F.; Capria, M. T.; Blewett, D.; Combe, J. P.; Farina, M.;

Quantifying Libya-4 Surface Reflectance Heterogeneity With WorldView-1, 2 and EO-1 Hyperion

NASA Technical Reports Server (NTRS)

Neigh, Christopher S. R.; McCorkel, Joel; Middleton, Elizabeth M.

2015-01-01

The land surface imaging (LSI) virtual constellation approach promotes the concept of increasing Earth observations from multiple but disparate satellites. We evaluated this through spectral and spatial domains, by comparing surface reflectance from 30-m Hyperion and 2-m resolution WorldView-2 (WV-2) data in the Libya-4 pseudoinvariant calibration site. We convolved and resampled Hyperion to WV-2 bands using both cubic convolution and nearest neighbor (NN) interpolation. Additionally, WV-2 and WV-1 same-date imagery were processed as a cross-track stereo pair to generate a digital terrain model to evaluate the effects from large (>70 m) linear dunes. Agreement was moderate to low on dune peaks between WV-2 and Hyperion (R2 <; 0.4) but higher in areas of lower elevation and slope (R2 > 0.6). Our results provide a satellite sensor intercomparison protocol for an LSI virtual constellation at high spatial resolution, which should start with geolocation of pixels, followed by NN interpolation to avoid tall dunes that enhance surface reflectance differences across this internationally utilized site.

Academic and Resident Radiation Oncologists' Attitudes and Intentions Regarding Radiation Therapy near the End of Life.

PubMed

Lloyd, Shane; Dosoretz, Arie P; Yu, James B; Evans, Suzanne B; Decker, Roy H

2016-02-01

There has been increasing scrutiny about cancer treatment for patients very near the end of life (EoL), yet a substantial number receive palliative radiation therapy (RT) in this setting. Our aim was to document the attitudes and intentions of thought leaders and trainees in giving RT near the EoL. We distributed an anonymous survey to 473 radiation oncologists and residents. The survey examined the clinical and psychosocial factors considered as well as intentions and expectations in the delivery of RT near the EoL. Factors surrounding unfinished treatment courses, and the formative factors that shape opinions about RT at the EoL were also explored. We received 139 responses (29%). Eighty-nine percent of respondents worked at academic institutions. The factors that respondents most often consider very or extremely important to offer RT near the EoL were the preference of the patient to be treated (94%), the ability to tolerate treatment (88%), and palliative intent (70%). After instances when their patients were unable to complete treatment near the EoL, 42% of respondents said they would prescribe a shorter treatment the next time they see a similar patient. Personal experience (71%) was most often listed as very or extremely important in shaping their opinions about RT near the EoL. Survey respondents, 89% of whom were academic radiation oncologists, have a positive view of palliative RT near the EoL. They favor shorter fractionation for patients near the EoL. Personal experience is most important in shaping practices and attitudes.

New regulations regarding Postgraduate Medical Training in Spain: perception of the tutor's role in the Murcia Region

PubMed Central

2010-01-01

Background Recently introduced regulatory changes have expanded the Tutor role to include their primary responsibility for Postgraduate Medical Training (PMT). However, accreditation and recognition of that role has been devolved to the autonomic regions. The opinions of the RT may be relevant to future decisions; Methods A comprehensive questionnaire, including demographic characteristics, academic and research achievement and personal views about their role, was sent to 201 RTs in the Murcia Region of Spain. The responses are described using median and interquartile ranges (IQR); Results There were 147 replies (response rate 73%), 69% male, mean age 45 ± 7 yrs. RTs perception of the residents' initial knowledge and commitment throughout the program was 5 (IQR 4-6) and 7 (IQR 5-8), respectively. As regards their impact on the PMT program, RTs considered that their own contribution was similar to that of senior residents. RTs perception of how their role was recognised was 5 (IQR 3-6). Only 16% did not encounter difficulties in accessing specific RT training programs. Regarding the RTs view of their various duties, supervision of patient care was accorded the greatest importance (64%) while the satisfactory completion of the PMT program and supervision of day-to-day activities were also considered important (61% and 59% respectively). The main RT requirements were: a greater professional recognition (97%), protected time (95%), specific RT training programs (95%) and financial recognition (86%); Conclusions This comprehensive study, reflecting the feelings of our RTs, provides a useful insight into the reality of their work and the findings ought to be taken into consideration in the imminent definitive regulatory document on PMT. PMID:20540814

Bidirectional Reflectance Modeling of Non-homogeneous Plant Canopies

NASA Technical Reports Server (NTRS)

Norman, J. M.

1984-01-01

Efforts to develop a three dimensional model to predict canopy, bidirectional reflectance for heterogenous plant stands using incident radiation and canopy structural descriptions as inputs are described. Utility programs were developed to cope with the complex output from the 3 dimensional model. In addition an attempt was made to define leaf and soil properties, which are appropriate to the mode, by measuring leaf and soil bidirectional reflectance distribution functions; since almost no data exist on these distributions. In the process it was realized that most models probably are using the wrong leaf spectral properties, and that off-nadir reflectance measurements are difficult to make because of non-Lambertian properties of reference surfaces. Also, in the visible wavebands, rough soil may not be distinguishable from canopies when viewed from above.

Utility of dengue NS1 antigen rapid diagnostic test for use in difficult to reach areas and its comparison with dengue NS1 ELISA and qRT-PCR.

PubMed

Shukla, Mohan K; Singh, Neeru; Sharma, Ravendra K; Barde, Pradip V

2017-07-01

The objective of this study was to demonstrate the utility of dengue virus (DENV) non structural protein 1 (NS1) based rapid diagnostic test (RDT) for use in tribal and difficult to reach areas for early dengue (DEN) diagnosis in acute phase patients and evaluate its sensitivity and specificity against DENV NS1 enzyme linked immune sorbent assay (ELISA) and real time reverse transcriptase polymerase chain reaction (qRT-PCR). The DENV NS1 RDT was used for preliminary diagnosis during outbreaks in difficult to reach rural and tribal areas. The diagnosis was confirmed by DENV NS1 ELISA in the laboratory. The samples were also tested and serotyped by qRT-PCR. The results were evaluated using statistical tests. The DENV NS1 RDT showed 99.2% sensitivity and 96.0% specificity when analyzed using DENV NS1 ELISA as standard. The specificity and sensitivity of the RDT when compared with qRT-PCR was 93.6% and 91.1%, respectively. The serotype specific evaluation showed more than 90% sensitivity and specificity for DENV-1, 2, and 3. The RDT proved a good diagnostic tool in difficult to reach rural and tribal areas. Further evaluation studies with different commercially available RDTs in different field conditions are essential, that will help clinicians and patients for treatment and programme managers for timely intervention. © 2017 Wiley Periodicals, Inc.

Parallel-multiplexed excitation light-sheet microscopy (Conference Presentation)

NASA Astrophysics Data System (ADS)

Xu, Dongli; Zhou, Weibin; Peng, Leilei

2017-02-01

Laser scanning light-sheet imaging allows fast 3D image of live samples with minimal bleach and photo-toxicity. Existing light-sheet techniques have very limited capability in multi-label imaging. Hyper-spectral imaging is needed to unmix commonly used fluorescent proteins with large spectral overlaps. However, the challenge is how to perform hyper-spectral imaging without sacrificing the image speed, so that dynamic and complex events can be captured live. We report wavelength-encoded structured illumination light sheet imaging (λ-SIM light-sheet), a novel light-sheet technique that is capable of parallel multiplexing in multiple excitation-emission spectral channels. λ-SIM light-sheet captures images of all possible excitation-emission channels in true parallel. It does not require compromising the imaging speed and is capable of distinguish labels by both excitation and emission spectral properties, which facilitates unmixing fluorescent labels with overlapping spectral peaks and will allow more labels being used together. We build a hyper-spectral light-sheet microscope that combined λ-SIM with an extended field of view through Bessel beam illumination. The system has a 250-micron-wide field of view and confocal level resolution. The microscope, equipped with multiple laser lines and an unlimited number of spectral channels, can potentially image up to 6 commonly used fluorescent proteins from blue to red. Results from in vivo imaging of live zebrafish embryos expressing various genetic markers and sensors will be shown. Hyper-spectral images from λ-SIM light-sheet will allow multiplexed and dynamic functional imaging in live tissue and animals.

A Last Look at Titan

NASA Image and Video Library

2017-09-15

As it glanced around the Saturn system one final time, NASA's Cassini spacecraft captured this view of the planet's giant moon Titan. Interest in mysterious Titan was a major motivating factor to return to Saturn with Cassini-Huygens following the Voyager mission flybys of the early 1980s. Cassini and its Huygens probe, supplied by European Space Agency, revealed the moon to be every bit as fascinating as scientists had hoped. These views were obtained by Cassini's narrow-angle camera on Sept. 13, 2017. They are among the last images Cassini sent back to Earth. This natural color view, made from images taken using red, green and blue spectral filters, shows Titan much as Voyager saw it -- a mostly featureless golden orb, swathed in a dense atmospheric haze. An enhanced-color view (Figure 1) adds to this color a separate view taken using a spectral filter (centered at 938 nanometers) that can partially see through the haze. The views were acquired at a distance of 481,000 miles (774,000 kilometers) from Titan. The image scale is about 3 miles (5 kilometers) per pixel. https://photojournal.jpl.nasa.gov/catalog/PIA21890

Enceladus Stetting Behind Saturn (Image & Movie)

NASA Image and Video Library

2017-09-15

Saturn's active, ocean-bearing moon Enceladus sinks behind the giant planet in a farewell portrait from NASA's Cassini spacecraft. This view of Enceladus was taken by NASA's Cassini spacecraft on Sept. 13, 2017. It is among the last images Cassini sent back. The view is part of a movie sequence of images taken over a period of 40 minutes as the icy moon passed behind Saturn from the spacecraft's point of view. Images taken using red, green and blue spectral filters were assembled to create the natural color view. (A monochrome version of the image, taken using a clear spectral filter, is also available.) The images were taken using Cassini's narrow-angle camera at a distance of 810,000 million miles (1.3 million kilometers) from Enceladus and about 620,000 miles (1 million kilometers) from Saturn. Image scale on Enceladus is 5 miles (8 kilometers) per pixel. A movie is available at https://photojournal.jpl.nasa.gov/catalog/PIA21889

NASA SPoRT Modeling and Data Assimilation Research and Transition Activities Using WRF, LIS and GSI

NASA Technical Reports Server (NTRS)

Case, Jonathan L.; Blankenship, Clay B.; Zavodsky, Bradley T.; Srikishen, Jayanthi; Berndt, Emily B.

2014-01-01

weather research and forecasting ===== The NASA Short-term Prediction Research and Transition (SPoRT) program has numerous modeling and data assimilation (DA) activities in which the WRF model is a key component. SPoRT generates realtime, research satellite products from the MODIS and VIIRS instruments, making the data available to NOAA/NWS partners running the WRF/EMS, including: (1) 2-km northwestern-hemispheric SST composite, (2) daily, MODIS green vegetation fraction (GVF) over CONUS, and (3) NASA Land Information System (LIS) runs of the Noah LSM over the southeastern CONUS. Each of these datasets have been utilized by specific SPoRT partners in local EMS model runs, with select offices evaluating the impacts using a set of automated scripts developed by SPoRT that manage data acquisition and run the NCAR Model Evaluation Tools verification package. SPoRT is engaged in DA research with the Gridpoint Statistical Interpolation (GSI) and Ensemble Kalman Filter in LIS for soil moisture DA. Ongoing DA projects using GSI include comparing the impacts of assimilating Atmospheric Infrared Sounder (AIRS) radiances versus retrieved profiles, and an analysis of extra-tropical cyclones with intense non-convective winds. As part of its Early Adopter activities for the NASA Soil Moisture Active Passive (SMAP) mission, SPoRT is conducting bias correction and soil moisture DA within LIS to improve simulations using the NASA Unified-WRF (NU-WRF) for both the European Space Agency's Soil Moisture Ocean Salinity and upcoming SMAP mission data. SPoRT has also incorporated real-time global GVF data into LIS and WRF from the VIIRS product being developed by NOAA/NESDIS. This poster will highlight the research and transition activities SPoRT conducts using WRF, NU-WRF, EMS, LIS, and GSI.

Error analysis for spectral approximation of the Korteweg-De Vries equation

NASA Technical Reports Server (NTRS)

Maday, Y.; recent years.

1987-01-01

The conservation and convergence properties of spectral Fourier methods for the numerical approximation of the Korteweg-de Vries equation are analyzed. It is proved that the (aliased) collocation pseudospectral method enjoys the same convergence properties as the spectral Galerkin method, which is less effective from the computational point of view. This result provides a precise mathematical answer to a question raised by several authors in recent years.

Evaluating the utility of the medium-spatial resolution Landsat 8 multispectral sensor in quantifying aboveground biomass in uMgeni catchment, South Africa

NASA Astrophysics Data System (ADS)

Dube, Timothy; Mutanga, Onisimo

2015-03-01

Aboveground biomass estimation is critical in understanding forest contribution to regional carbon cycles. Despite the successful application of high spatial and spectral resolution sensors in aboveground biomass (AGB) estimation, there are challenges related to high acquisition costs, small area coverage, multicollinearity and limited availability. These challenges hamper the successful regional scale AGB quantification. The aim of this study was to assess the utility of the newly-launched medium-resolution multispectral Landsat 8 Operational Land Imager (OLI) dataset with a large swath width, in quantifying AGB in a forest plantation. We applied different sets of spectral analysis (test I: spectral bands; test II: spectral vegetation indices and test III: spectral bands + spectral vegetation indices) in testing the utility of Landsat 8 OLI using two non-parametric algorithms: stochastic gradient boosting and the random forest ensembles. The results of the study show that the medium-resolution multispectral Landsat 8 OLI dataset provides better AGB estimates for Eucalyptus dunii, Eucalyptus grandis and Pinus taeda especially when using the extracted spectral information together with the derived spectral vegetation indices. We also noted that incorporating the optimal subset of the most important selected medium-resolution multispectral Landsat 8 OLI bands improved AGB accuracies. We compared medium-resolution multispectral Landsat 8 OLI AGB estimates with Landsat 7 ETM + estimates and the latter yielded lower estimation accuracies. Overall, this study demonstrates the invaluable potential and strength of applying the relatively affordable and readily available newly-launched medium-resolution Landsat 8 OLI dataset, with a large swath width (185-km) in precisely estimating AGB. This strength of the Landsat OLI dataset is crucial especially in sub-Saharan Africa where high-resolution remote sensing data availability remains a challenge.

Using Nadir and Directional Emissivity as a Probe of Particle Microphysical Properties

NASA Astrophysics Data System (ADS)

Pitman, Karly M.; Wolff, Michael J.; Bandfield, Joshua L.; Clayton, Geoffrey C.

Real surfaces are not expected to be diffuse emitters, thus observed emissivity values of surface dust deposits are a function of viewing geometry. Attempts to model infrared emission spectral profiles of surface dust deposits at nadir have not yet matured to match the sophistication of astrophysical dust radiative transfer codes. In the absence of strong thermal gradients, directional emissivity may be obtained theoretically via a combination of reciprocity and Kirchhoff's Law. Owing to a lack of laboratory data on directional emissivity for comparison, theorists have not explored the potential utility of directional emissivity as a direct probe of surface dust microphysical properties. Motivated by future analyses of MGS/TES emission phase function (EPF) sequences and the upcoming Mars Exploration Rover mini-TES dataset, we explore the effects of dust particle size and composition on observed radiances at nadir and off-nadir geometries in the TES spectral regime using a combination of multiple scattering radiative transfer and Mie scattering algorithms. Comparisons of these simulated spectra to laboratory spectra of standard mineral assemblages will also be made. This work is supported through NASA grant NAGS-9820 (MJW) and LSU Board of Regents (KMP).

Multi-Image Registration for an Enhanced Vision System

NASA Technical Reports Server (NTRS)

Hines, Glenn; Rahman, Zia-Ur; Jobson, Daniel; Woodell, Glenn

2002-01-01

An Enhanced Vision System (EVS) utilizing multi-sensor image fusion is currently under development at the NASA Langley Research Center. The EVS will provide enhanced images of the flight environment to assist pilots in poor visibility conditions. Multi-spectral images obtained from a short wave infrared (SWIR), a long wave infrared (LWIR), and a color visible band CCD camera, are enhanced and fused using the Retinex algorithm. The images from the different sensors do not have a uniform data structure: the three sensors not only operate at different wavelengths, but they also have different spatial resolutions, optical fields of view (FOV), and bore-sighting inaccuracies. Thus, in order to perform image fusion, the images must first be co-registered. Image registration is the task of aligning images taken at different times, from different sensors, or from different viewpoints, so that all corresponding points in the images match. In this paper, we present two methods for registering multiple multi-spectral images. The first method performs registration using sensor specifications to match the FOVs and resolutions directly through image resampling. In the second method, registration is obtained through geometric correction based on a spatial transformation defined by user selected control points and regression analysis.

The New World Order: Implications for Army Policy and Force Structure

DTIC Science & Technology

1992-04-06

AD-A249 431 The mmsw expmeud in tWe paper in~ &#on of the autor anid do not neaariY reflhct the views Of the NDuenat o( Defense ot any of its qu~ia...Pennsylvania 17013 DISTRIBUTION STATEMENT A: Approved for public release; distribution is unlimited. The views expressed In this paper 4rt th§@ S Ef author...of threats to its survival from sources as diverse as foreign invasion to internal rebellion. An exhaustive list of past threats and remote future

Analysis of Magnetic Resonance Image Signal Fluctuations Acquired During MR-Guided Radiotherapy

PubMed Central

Breto, Adrian L; Padgett, Kyle R; Ford, John C; Kwon, Deukwoo; Chang, Channing; Fuss, Martin; Mellon, Eric A

2018-01-01

Magnetic resonance-guided radiotherapy (MRgRT) is a new and evolving treatment modality that allows unprecedented visualization of the tumor and surrounding anatomy. MRgRT includes daily 3D magnetic resonance imaging (MRI) for setup and rapidly repeated near real-time MRI scans during treatment for target tracking. One of the more exciting potential benefits of MRgRT is the ability to analyze serial MRIs to monitor treatment response or predict outcomes. A typical radiation treatment (RT) over the span of 10-15 minutes on the MRIdian system (ViewRay, Cleveland, OH) yields thousands of “cine” images, each acquired in 250 ms. This unique data allows for a glimpse in image intensity changes during RT delivery. In this report, we analyze cine images from a single fraction RT of a glioblastoma patient on the ViewRay platform in order to characterize the dynamic signal changes occurring during RT therapy. The individual frames in the cines were saved into DICOM format and read into an MIM image analysis platform (MIM Software, Cleveland, OH) as a time series. The three possible states of the three Cobalt-60 radiation sources—OFF, READY, and ON—were also recorded. An in-house Java plugin for MIM was created in order to perform principal component analysis (PCA) on each of the datasets. The analysis resulted in first PC, related to monotonous signal increase over the course of the treatment fraction. We found several distortion patterns in the data that we postulate result from the perturbation of the magnetic field due to the moving metal parts in the platform while treatment was being administered. The largest variations were detected when all Cobalt-60 sources were OFF. During this phase of the treatment, the gantry and multi-leaf collimators (MLCs) are moving. Conversely, when all Cobalt-60 sources were in the ON position, the image signal fluctuations were minimal, relating to very little mechanical motion. At this phase, the gantry, the MLCs, and sources are fixed in their positions. These findings were confirmed in a study with the daily quality assurance (QA) phantom. While the identified variations were not related to physiological processes, our findings confirm the sensitivity of the developed approach to identify very small fluctuations. Relating these variations to the physical changes that occur during treatment shows the methodical ability of the technique to uncover their underlying sources. PMID:29850380

MAUVE/SWIPE: an imaging instrument concept with multi-angular, -spectral, and -polarized capability for remote sensing of aerosols, ocean color, clouds, and vegetation from space

NASA Astrophysics Data System (ADS)

Frouin, Robert; Deschamps, Pierre-Yves; Rothschild, Richard; Stephan, Edward; Leblanc, Philippe; Duttweiler, Fred; Ghaemi, Tony; Riedi, Jérôme

2006-12-01

The Monitoring Aerosols in the Ultraviolet Experiment (MAUVE) and the Short-Wave Infrared Polarimeter Experiment (SWIPE) instruments have been designed to collect, from a typical sun-synchronous polar orbit at 800 km altitude, global observations of the spectral, polarized, and directional radiance reflected by the earth-atmosphere system for a wide range of applications. Based on the heritage of the POLDER radiometer, the MAUVE/SWIPE instrument concept combines the merits of TOMS for observing in the ultra-violet, MISR for wide field-of-view range, MODIS, for multi-spectral aspects in the visible and near infrared, and the POLDER instrument for polarization. The instruments are camera systems with 2-dimensional detector arrays, allowing a 120-degree field-of-view with adequate ground resolution (i.e., 0.4 or 0.8 km at nadir) from satellite altitude. Multi-angle viewing is achieved by the along-track migration at spacecraft velocity of the 2-dimensional field-of-view. Between the cameras' optical assembly and detector array are two filter wheels, one carrying spectral filters, the other polarizing filters, allowing measurements of the first three Stokes parameters, I. Q, and V, of the incident radiation in 16 spectral bands optimally placed in the interval 350-2200 nm. The spectral range is 350-1050 nm for the MAUVE instrument and 1050-2200 nm for the SWIPE instrument. The radiometric requirements are defined to fully exploit the multi-angular, multi-spectral, and multi-polarized capability of the instruments. These include a wide dynamic range, a signal-to-noise ratio above 500 in all channels at maximum radiance level, i.e., when viewing a surface target of albedo equal to 1, and a noise-equivalent-differential reflectance better than 0.0005 at low signal level for a sun at zenith. To achieve daily global coverage, a pair of MAUVE and SWIPE instruments would be carried by each of two mini-satellites placed on interlaced orbits. The equator crossing time of the two satellites would be adjusted to allow simultaneous observations of the overlapping zone viewed from the two parallel orbits of the twin satellites. Using twin satellites instead of a single satellite would allow measurements in a more complete range of scattering angles. A MAUVE/SWIPE satellite mission would improve significantly the accuracy of ocean color observations from space, and will extend the retrieval of ocean optical properties to the ultra-violet, where they become very sensitive to detritus material and dissolved organic matter. It would also provide a complete description of the scattering and absorption properties of aerosol particles, as well as their size distribution and vertical distribution. Over land, the retrieved bidirectional reflectance function would allow a better classification of terrestrial vegetation and discrimination of surface types. The twin satellite concept, by providing stereoscopic capability, would offer the possibility to analyze the three-dimensional structure and radiative properties of cloud fields.

Optimal attributes for the object based detection of giant reed in riparian habitats: A comparative study between Airborne High Spatial Resolution and WorldView-2 imagery

NASA Astrophysics Data System (ADS)

Fernandes, Maria Rosário; Aguiar, Francisca C.; Silva, João M. N.; Ferreira, Maria Teresa; Pereira, José M. C.

2014-10-01

Giant reed is an aggressive invasive plant of riparian ecosystems in many sub-tropical and warm-temperate regions, including Mediterranean Europe. In this study we tested a set of geometric, spectral and textural attributes in an object based image analysis (OBIA) approach to map giant reed invasions in riparian habitats. Bagging Classification and Regression Tree were used to select the optimal attributes and to build the classification rules sets. Mapping accuracy was performed using landscape metrics and the Kappa coefficient to compare the topographical and geometric similarity between the giant reed patches obtained with the OBIA map and with a validation map derived from on-screen digitizing. The methodology was applied in two high spatial resolution images: an airborne multispectral imagery and the newly WorldView-2 imagery. A temporal coverage of the airborne multispectral images was radiometrically calibrated with the IR-Mad transformation and used to assess the influence of the phenological variability of the invader. We found that optimal attributes for giant reed OBIA detection are a combination of spectral, geometric and textural information, with different scoring selection depending on the spectral and spatial characteristics of the imagery. WorldView-2 showed higher mapping accuracy (Kappa coefficient of 77%) and spectral attributes, including the newly yellow band, were preferentially selected, although a tendency to overestimate the total invaded area, due to the low spatial resolution (2 m of pixel size vs. 50 cm) was observed. When airborne images were used, geometric attributes were primarily selected and a higher spatial detail of the invasive patches was obtained, due to the higher spatial resolution. However, in highly heterogeneous landscapes, the low spectral resolution of the airborne images (4 bands instead of the 8 of WorldView-2) reduces the capability to detect giant reed patches. Giant reed displays peculiar spectral and geometric traits, at leaf, canopy and stand level, which makes the OBIA approach a very suitable technique for management purposes.

"Cor Occidere": a novel strategy of targeting the tumor core by radiosurgery in a radio- and chemo-resistant intracranial hemangiopericytoma.

PubMed

Li, You Quan; Chua, Eu Tiong; Chua, Kevin L M; Chua, Melvin L K

2018-02-01

Intracranial hemangiopericytomas (HPC) are chemotherapy- and radiotherapy (RT)-resistant. Here, we report on a novel stereotactic radiosurgery (SRS) technique-"Cor Occidere" (Latin), as a potential strategy of overcoming radioresistance of HPC. A 36-year old female presented to our clinic for consideration of a 3rd-course of RT for her recurrent cavernous sinus HPC, following previous cranial RT at 13 and 5 years prior, and a failed 9 months trial of bevacizumab/temozolomide. The tumor-adjacent brain stem and carotid artery risked substantial damage given the cumulative RT doses to these organs. We therefore designed an SRS plan targeting only the tumor core with 16 Gy single-fraction. Despite underdosing the tumor margin, we achieved stable disease over 25 months, contrasting her responses to systemic therapies. Achieving tumor control despite a suboptimal treatment that utilized high dose ablation of the tumor core suggests novel biological mechanisms to overcome radioresistance of HPC.

How you perceive threat determines your behavior

PubMed Central

Fernandes, Orlando; Portugal, Liana C. L.; Alves, Rita C. S.; Campagnoli, Rafaela R.; Mocaiber, Izabela; David, Isabel P. A.; Erthal, Fátima C. S.; Volchan, Eliane; de Oliveira, Leticia; Pereira, Mirtes G.

2013-01-01

The prioritization of processing emotional stimuli usually produces deleterious effects on task performance when it distracts from a task. One common explanation is that brain resources are consumed by emotional stimuli, diverting resources away from executing the task. Viewing unpleasant stimuli also generates defensive reactions, and these responses may be at least partially responsible for the effect of the emotional modulation observed in various reaction time (RT) paradigms. We investigated whether modulatory effects on RT vary if we presented threat stimuli to prompt different defensive responses. To trigger different responses, we manipulated threat perception by moving the direction of threatening stimuli. Threatening or neutral stimuli were presented as distractors during a bar orientation discrimination task. The results demonstrated that threat stimuli directed toward the observer produced a decrease in RT; in contrast, threat stimuli directed away from the observer produced an increase in RT, when compared to neutral stimuli. Accelerated RT during directed toward threat stimuli was attributed to increased motor preparation resulting from strong activation of the defense response cascade. In contrast, directed away threat stimuli likely activated the defense cascade, but less intensively, prompting immobility. Different threat stimuli produced varying effects, which was interpreted as evidence that the modulation of RT by emotional stimuli represents the summation of attentional and motivational effects. Additionally, participants who had been previously exposed to diverse types of violent crime were more strongly influenced by threat stimuli directed toward the observer. In sum, our data support the concept that emotions are indeed action tendencies. PMID:24115925

Analyze and predict VLTI observations: the Role of 2D/3D dust continuum radiative transfer codes

NASA Astrophysics Data System (ADS)

Pascucci, I.; Henning, Th; Steinacker, J.; Wolf, S.

2003-10-01

Radiative Transfer (RT) codes with image capability are a fundamental tool for preparing interferometric observations and for interpreting visibility data. In view of the upcoming VLTI facilities, we present the first comparison of images/visibilities coming from two 3D codes that use completely different techniques to solve the problem of self-consistent continuum RT. In addition, we focus on the astrophysical case of a disk distorted by tidal interaction with by-passing stars or internal planets and investigate for which parameters the distortion can be best detected in the mid-infrared using the mid-infrared interferometric device MIDI.

2D/3D Dust Continuum Radiative Transfer Codes to Analyze and Predict VLTI Observations

NASA Astrophysics Data System (ADS)

Pascucci, I.; Henning, Th.; Steinacker, J.; Wolf, S.

Radiative Transfer (RT) codes with image capability are a fundamental tool for preparing interferometric observations and for interpreting visibility data. In view of the upcoming VLTI facilities, we present the first comparison of images/visibilities coming from two 3D codes that use completely different techniques to solve the problem of self-consistent continuum RT. In addition, we focus on the astrophysical case of a disk distorted by tidal interaction with by-passing stars or internal planets and investigate for which parameters the distortion can be best detected in the mid-infrared using the mid-infrared interferometric device MIDI.

Ultraviolet Raman Wide-Field Hyperspectral Imaging Spectrometer for Standoff Trace Explosive Detection.

PubMed

Hufziger, Kyle T; Bykov, Sergei V; Asher, Sanford A

2017-02-01

We constructed the first deep ultraviolet (UV) Raman standoff wide-field imaging spectrometer. Our novel deep UV imaging spectrometer utilizes a photonic crystal to select Raman spectral regions for detection. The photonic crystal is composed of highly charged, monodisperse 35.5 ± 2.9 nm silica nanoparticles that self-assemble in solution to produce a face centered cubic crystalline colloidal array that Bragg diffracts a narrow ∼1.0 nm full width at half-maximum (FWHM) UV spectral region. We utilize this photonic crystal to select and image two different spectral regions containing resonance Raman bands of pentaerythritol tetranitrate (PETN) and NH 4 NO 3 (AN). These two deep UV Raman spectral regions diffracted were selected by angle tuning the photonic crystal. We utilized this imaging spectrometer to measure 229 nm excited UV Raman images containing ∼10-1000 µg/cm 2 samples of solid PETN and AN on aluminum surfaces at 2.3 m standoff distances. We estimate detection limits of ∼1 µg/cm 2 for PETN and AN films under these experimental conditions.

Accuracy enhancement of laser induced breakdown spectra using permittivity and size optimized plasma confinement rings.

PubMed

Li, An; Guo, Shuai; Wazir, Nasrullah; Chai, Ke; Liang, Liang; Zhang, Min; Hao, Yan; Nan, Pengfei; Liu, Ruibin

2017-10-30

The inevitable problems in laser induced breakdown spectroscopy are matrix effect and statistical fluctuation of the spectral signal, which can be partly avoided by utilizing a proper confined unit. The dependences of spectral signal enhancement on relative permittivity were studied by varying materials to confine the plasma, which include polytetrafluoroethylene(PTFE), nylon/dacron, silicagel, and nitrile-butadiene rubber (NBR) with the relative permittivity 2.2, ~3.3, 3.6, 8~13, 15~22. We found that higher relative permittivity rings induce stronger enhancement ability, which restricts the energy dissipation of plasma better and due to the reflected electromagnetic wave from the wall of different materials, the electromagnetic field of plasma can be well confined and makes the distribution of plasma more orderly. The spectral intensities of the characteristic lines Si I 243.5 nm and Si I 263.1 nm increased approximately 2 times with relative permittivity values from 2.2 to ~20. The size dependent enhancement of PTFE was further checked and the maximum gain was realized by using a confinement ring with a diameter size of 5 mm and a height of 3 mm (D5mmH3mm), and the rings with D2mmH1mm and D3mmH2mm also show higher enhancement factor. In view of peak shift, peak lost and accidental peaks in the obtained spectra were properly treated in data progressing; the spectral fluctuation decreased drastically for various materials with different relative permittivities as confined units, which means the core of plasma is stabilized, attributing to the confinement effect. Furthermore, the quantitative analysis in coal shows wonderful results-the prediction fitting coefficient R 2 reaches 0.98 for ash and 0.99 for both volatile and carbon.

Optical Design of the MOSES Sounding Rocket Experiment

NASA Technical Reports Server (NTRS)

Thomas, Roger J.; Kankelborg, Charles C.; Fisher, Richard R. (Technical Monitor)

2001-01-01

The Multi-Order Solar EUV Spectrograph (MOSES) is a sounding rocket payload now being developed by Montana State University in collaboration with the Goddard Space Flight Center, Lockheed Martin Advanced Technology Center, and Mullard Space Science Laboratory. The instrument utilizes a unique optical design to provide solar EUV measurements with true 2-pixel resolutions of 1.0 arcsec and 60 mA over a full two-dimensional field of view of 1056 x 528 arcsec, all at a time cadence of 10 s. This unprecedented capability is achieved by means of an objective spherical grating 100 mm in diameter, ruled at 833 gr/mm. The concave grating focuses spectrally dispersed solar radiation onto three separate detectors, simultaneously recording the zero-order as well as the plus and minus first-spectral-order images. Data analysis procedures, similar to those used in X-ray tomography reconstructions, can then disentangle the mixed spatial and spectral information recorded by the multiple detectors. A flat folding mirror permits an imaging focal length of 4.74 m to be packaged within the payload's physical length of 2.82 m. Both the objective grating and folding flat have specialized, closely matched, multilayer coatings that strongly enhance their EUV reflectance while also suppressing off-band radiation that would otherwise complicate data inversion. Although the spectral bandpass is rather narrow, several candidate wavelength intervals are available to carry out truly unique scientific studies of the outer solar atmosphere. Initial flights of MOSES, scheduled to begin in 2004, will observe a 10 Angstrom band that covers very strong emission lines characteristic of both the sun's corona (Si XI 303 Angstroms) and transition-region (He II 304 Angstroms). The MOSES program is supported by a grant from NASA's Office of Space Science.

A hybrid thermal video and FTIR spectrometer system for rapidly locating and characterizing gas leaks

NASA Astrophysics Data System (ADS)

Williams, David J.; Wadsworth, Winthrop; Salvaggio, Carl; Messinger, David W.

2006-08-01

Undiscovered gas leaks, known as fugitive emissions, in chemical plants and refinery operations can impact regional air quality and present a loss of product for industry. Surveying a facility for potential gas leaks can be a daunting task. Industrial leak detection and repair programs can be expensive to administer. An efficient, accurate and cost effective method for detecting and quantifying gas leaks would both save industries money by identifying production losses and improve regional air quality. Specialized thermal video systems have proven effective in rapidly locating gas leaks. These systems, however, do not have the spectral resolution for compound identification. Passive FTIR spectrometers can be used for gas compound identification, but using these systems for facility surveys is problematic due to their small field of view. A hybrid approach has been developed that utilizes the thermal video system to locate gas plumes using real time visualization of the leaks, coupled with the high spectral resolution FTIR spectrometer for compound identification and quantification. The prototype hybrid video/spectrometer system uses a sterling cooled thermal camera, operating in the MWIR (3-5 μm) with an additional notch filter set at around 3.4 μm, which allows for the visualization of gas compounds that absorb in this narrow spectral range, such as alkane hydrocarbons. This camera is positioned alongside of a portable, high speed passive FTIR spectrometer, which has a spectral range of 2 - 25 μm and operates at 4 cm -1 resolution. This system uses a 10 cm telescope foreoptic with an onboard blackbody for calibration. The two units are optically aligned using a turning mirror on the spectrometer's telescope with the video camera's output.

Hyperspectral cytometry.

PubMed

Grégori, Gérald; Rajwa, Bartek; Patsekin, Valery; Jones, James; Furuki, Motohiro; Yamamoto, Masanobu; Paul Robinson, J

2014-01-01

Hyperspectral cytometry is an emerging technology for single-cell analysis that combines ultrafast optical spectroscopy and flow cytometry. Spectral cytometry systems utilize diffraction gratings or prism-based monochromators to disperse fluorescence signals from multiple labels (organic dyes, nanoparticles, or fluorescent proteins) present in each analyzed bioparticle onto linear detector arrays such as multianode photomultipliers or charge-coupled device sensors. The resultant data, consisting of a series of characterizing every analyzed cell, are not compensated by employing the traditional cytometry approach, but rather are spectrally unmixed utilizing algorithms such as constrained Poisson regression or non-negative matrix factorization. Although implementations of spectral cytometry were envisioned as early as the 1980s, only recently has the development of highly sensitive photomultiplier tube arrays led to design and construction of functional prototypes and subsequently to introduction of commercially available systems. This chapter summarizes the historical efforts and work in the field of spectral cytometry performed at Purdue University Cytometry Laboratories and describes the technology developed by Sony Corporation that resulted in release of the first commercial spectral cytometry system-the Sony SP6800. A brief introduction to spectral data analysis is also provided, with emphasis on the differences between traditional polychromatic and spectral cytometry approaches.

Robust and transferable quantification of NMR spectral quality using IROC analysis

NASA Astrophysics Data System (ADS)

Zambrello, Matthew A.; Maciejewski, Mark W.; Schuyler, Adam D.; Weatherby, Gerard; Hoch, Jeffrey C.

2017-12-01

Non-Fourier methods are increasingly utilized in NMR spectroscopy because of their ability to handle nonuniformly-sampled data. However, non-Fourier methods present unique challenges due to their nonlinearity, which can produce nonrandom noise and render conventional metrics for spectral quality such as signal-to-noise ratio unreliable. The lack of robust and transferable metrics (i.e. applicable to methods exhibiting different nonlinearities) has hampered comparison of non-Fourier methods and nonuniform sampling schemes, preventing the identification of best practices. We describe a novel method, in situ receiver operating characteristic analysis (IROC), for characterizing spectral quality based on the Receiver Operating Characteristic curve. IROC utilizes synthetic signals added to empirical data as "ground truth", and provides several robust scalar-valued metrics for spectral quality. This approach avoids problems posed by nonlinear spectral estimates, and provides a versatile quantitative means of characterizing many aspects of spectral quality. We demonstrate applications to parameter optimization in Fourier and non-Fourier spectral estimation, critical comparison of different methods for spectrum analysis, and optimization of nonuniform sampling schemes. The approach will accelerate the discovery of optimal approaches to nonuniform sampling experiment design and non-Fourier spectrum analysis for multidimensional NMR.

3D polymer gel dosimetry using a 3D (DESS) and a 2D MultiEcho SE (MESE) sequence

NASA Astrophysics Data System (ADS)

Maris, Thomas G.; Pappas, Evangelos; Karolemeas, Kostantinos; Papadakis, Antonios E.; Zacharopoulou, Fotini; Papanikolaou, Nickolas; Gourtsoyiannis, Nicholas

2006-12-01

The utilization of 3D techniques in Magnetic Resonance Imaging data aquisition and post-processing analysis is a prerequisite especially when modern radiotherapy techniques (conformal RT, IMRT, Stereotactic RT) are to be used. The aim of this work is to compare a 3D Double Echo Steady State (DESS) and a 2D Multiple Echo Spin Echo (MESE) sequence in 3D MRI radiation dosimetry using two different MRI scanners and utilising N-VInylPyrrolidone (VIPAR) based polymer gels.

Technical limits of comparison of step-sectioning,immunohistochemistry and RT-PCR on breast cancer sentinel nodes: a study on methacarn-fixed tissue.

PubMed

Daniele, Lorenzo; Annaratone, Laura; Allia, Elena; Mariani, Sara; Armando, Enrico; Bosco, Martino; Macrì, Luigia; Cassoni, Paola; D'Armento, Giuseppe; Bussolati, Gianni; Cserni, Gabor; Sapino, Anna

2009-09-01

The optimal pathological assessment of sentinel nodes (SLNs) in breast cancer is a matter of debate. Currently, multilevel histological evaluation and immunohistochemistry (IHC) are recommended, but alternative RT-PCR procedures have been developed. To assess the reliability of these different procedures, we devised a step-sectioning protocol at 100 micron-intervals of 74 SLNs using methacarn fixation. mRNA was extracted from sections collected from levels 4 to 5. Mammaglobin, CEA and CK19 were used for RT-PCR. mRNA extraction was successful in 69 SLNs. Of these, 7 showed macrometastases (>2mm), 2 showed micrometastases (<2 mm) and 7 showed isolated tumour cells (ITC) by IHC. RT-PCR was positive for the three markers in 6 of 7 macrometastases and in 1 of 2 micrometastases. In the 2 RT-PCR negative cases, metastases were detected only on sections distant from those analysed by RT-PCR. CEA and/or CK19 were positive by RT-PCR in 3 of 7 ITC and in 23 morphologically negative SLNs. In conclusion, the main goal of our study was to show that the use of alternate sections of the same sample for different procedures is the key reason for the discrepancies between molecular and morphological analyses of SLN. We believe that only prospective studies with quantitative mRNA analysis of specific metastatic markers on the whole lymph node can elucidate the utility of molecular assessments of SLN.

Hubble's Next Generation Spectral Library

NASA Astrophysics Data System (ADS)

Heap, Sara R.; Lindler, D.

2008-03-01

Spectroscopic surveys of galaxies at z 1 or more bring the rest-frame ultraviolet into view of large, ground-based telescopes. This spectral region is rich in diagnostics, but these diagnostics have not yet been calibrated in terms of the properties of the responsible stellar population(s). Such calibrations are now possible with Hubble's Next Generation Spectral Library (NGSL). This library contains UV-optical spectra (0.2-1.0 microns) of 378 stars having a wide range in temperature, luminosity, and metallicity. We have derived the basic stellar parameters from the optical spectral region (0.35 - 1.0 microns) and are using them to calibrate UV spectral diagnostic indices and colors.

Utility of high-altitude infrared spectral data in mineral exploration: Application to Northern Patagonia Mountains, Arizona

USGS Publications Warehouse

Berger, B.R.; King, T.V.V.; Morath, L.C.; Phillips, J.D.

2003-01-01

Synoptic views of hydrothermal alteration assemblages are of considerable utility in regional-scale minerals exploration. Recent advances in data acquisition and analysis technologies have greatly enhanced the usefulness of remotely sensed imaging spectroscopy for reliable alteration mineral assemblages mapping. Using NASA's Airborne Visible Infrared Imaging Spectrometer (AVIRIS) sensor, this study mapped large areas of advanced argillic and phyllic-argillic alteration assemblages in the southeastern Santa Rita and northern Patagonia mountains, Arizona. Two concealed porphyry copper deposits have been identified during past exploration, the Red Mountain and Sunnyside deposits, and related published hydrothermal alteration zoning studies allow the comparison of the results obtained from AVIRIS data to the more traditional field mapping approaches. The AVIRIS mapping compares favorably with field-based studies. An analysis of iron-bearing oxide minerals above a concealed supergene chalcocite deposit at Red Mountain also indicates that remotely sensed data can be of value in the interpretation of leached caps above porphyry copper deposits. In conjunction with other types of geophysical data, AVIRIS mineral maps can be used to discriminate different exploration targets within a region.

Electroencephalography signatures of attention-deficit/hyperactivity disorder: clinical utility.

PubMed

Alba, Guzmán; Pereda, Ernesto; Mañas, Soledad; Méndez, Leopoldo D; González, Almudena; González, Julián J

2015-01-01

The techniques and the most important results on the use of electroencephalography (EEG) to extract different measures are reviewed in this work, which can be clinically useful to study subjects with attention-deficit/hyperactivity disorder (ADHD). First, we discuss briefly and in simple terms the EEG analysis and processing techniques most used in the context of ADHD. We review techniques that both analyze individual EEG channels (univariate measures) and study the statistical interdependence between different EEG channels (multivariate measures), the so-called functional brain connectivity. Among the former ones, we review the classical indices of absolute and relative spectral power and estimations of the complexity of the channels, such as the approximate entropy and the Lempel-Ziv complexity. Among the latter ones, we focus on the magnitude square coherence and on different measures based on the concept of generalized synchronization and its estimation in the state space. Second, from a historical point of view, we present the most important results achieved with these techniques and their clinical utility (sensitivity, specificity, and accuracy) to diagnose ADHD. Finally, we propose future research lines based on these results.

A synthetic high fidelity, high cadence spectral Earth database

NASA Astrophysics Data System (ADS)

Schwieterman, Edward; Meadows, Victoria; Robinson, Tyler D.; Lustig-Yaeger, Jacob; Sparks, William B.; Cracraft, Misty

2016-10-01

Earth is currently our only, and will always be our best, example of a living planet. While Earth data model comparisons have been effectively used in recent years to validate spectral models, observations by interplanetary spacecraft are limited to "snapshots" in terms of viewing geometry and Earth's dynamic surface and atmosphere state. We use the well-validated Virtual Planetary Laboratory 3D spectral Earth model to generate both simulated disk-averaged spectra and high resolution, spatially resolved spectral data cubes of Earth at a viewing geometry consistent with Lunar viewing angles at wavelengths from the far UV (0.1 μm) the to the far IR (200 μm). The database includes disk-averaged spectra from dates 03/19/2008 to 04/23/2008 at one-hour cadence and fully spectral data cubes for a subset of those times. These spectral products have a wide range of applications including calibration of spacecraft instrumentation (Robinson et al. 2014), modeling the radiation environment of permanently shadowed Lunar craters due to Earthshine (Glenar et al., in prep), and testing the detectability of atmospheric and surface features of an Earth-like planet orbiting a distant star with a large space-based telescope mission concepts such as LUVOIR. These data include the phase and time-dependent changes in spectral biosignatures (O2, O3, CH4, VRE) and habitability markers (N2, H2O, CO2, ocean glint). The advantages of the VPL Earth model data products over 1D spectra traditionally used for testing instrument architectures include accurate modeling of Earth's surface inhomogeneity (continental distribution and ice caps), cloud cover and variability, pole to equator temperature gradients, obliquity, phase-dependent scattering effects, and rotation. We present a subset of this spectral data including anticipated signal-to-noise calculations of an exoEarth twin at different phases using a coronagraph instrument model (Robinson et al. 2015). We also calculate time-dependent UBVRIJHK absolute magnitudes of Earth and binned intensities (W m-2 sr-1) in wavelength ranges (0.4-1 μm, 0.2-2 μm, 5-25 μm, and > 10 μm) relevant for planet detection with proposed space telescope missions.

Multispectral analysis tools can increase utility of RGB color images in histology

NASA Astrophysics Data System (ADS)

Fereidouni, Farzad; Griffin, Croix; Todd, Austin; Levenson, Richard

2018-04-01

Multispectral imaging (MSI) is increasingly finding application in the study and characterization of biological specimens. However, the methods typically used come with challenges on both the acquisition and the analysis front. MSI can be slow and photon-inefficient, leading to long imaging times and possible phototoxicity and photobleaching. The resulting datasets can be large and complex, prompting the development of a number of mathematical approaches for segmentation and signal unmixing. We show that under certain circumstances, just three spectral channels provided by standard color cameras, coupled with multispectral analysis tools, including a more recent spectral phasor approach, can efficiently provide useful insights. These findings are supported with a mathematical model relating spectral bandwidth and spectral channel number to achievable spectral accuracy. The utility of 3-band RGB and MSI analysis tools are demonstrated on images acquired using brightfield and fluorescence techniques, as well as a novel microscopy approach employing UV-surface excitation. Supervised linear unmixing, automated non-negative matrix factorization and phasor analysis tools all provide useful results, with phasors generating particularly helpful spectral display plots for sample exploration.

Fabrication of Ultrasensitive TES Bolometric Detectors for HIRMES

NASA Astrophysics Data System (ADS)

Brown, Ari-David; Brekosky, Regis; Franz, David; Hsieh, Wen-Ting; Kutyrev, Alexander; Mikula, Vilem; Miller, Timothy; Moseley, S. Harvey; Oxborrow, Joseph; Rostem, Karwan; Wollack, Edward

2018-04-01

The high-resolution mid-infrared spectrometer (HIRMES) is a high resolving power (R 100,000) instrument operating in the 25-122 μm spectral range and will fly on board the Stratospheric Observatory for Far-Infrared Astronomy in 2019. Central to HIRMES are its two transition edge sensor (TES) bolometric cameras, an 8 × 16 detector high-resolution array and a 64 × 16 detector low-resolution array. Both types of detectors consist of Mo/Au TES fabricated on leg-isolated Si membranes. Whereas the high-resolution detectors, with a noise equivalent power (NEP) 1.5 × 10-18 W/rt (Hz), are fabricated on 0.45 μm Si substrates, the low-resolution detectors, with NEP 1.0 × 10-17 W/rt (Hz), are fabricated on 1.40 μm Si. Here, we discuss the similarities and differences in the fabrication methodologies used to realize the two types of detectors.

Spatiotemporal chaos in the dynamics of buoyantly and diffusively unstable chemical fronts

NASA Astrophysics Data System (ADS)

Baroni, M. P. M. A.; Guéron, E.; De Wit, A.

2012-03-01

Nonlinear dynamics resulting from the interplay between diffusive and buoyancy-driven Rayleigh-Taylor (RT) instabilities of autocatalytic traveling fronts are analyzed numerically for various values of the relevant parameters. These are the Rayleigh numbers of the reactant A and autocatalytic product B solutions as well as the ratio D =DB/DA between the diffusion coefficients of the two key chemical species. The interplay between the coarsening dynamics characteristic of the RT instability and the constant short wavelength modulation of the diffusive instability can lead in some regimes to complex dynamics dominated by irregular succession of birth and death of fingers. By using spectral entropy measurements, we characterize the transition between order and spatial disorder in this system. The analysis of the power spectrum and autocorrelation function, moreover, identifies similarities between the various spatial patterns. The contribution of the diffusive instability to the complex dynamics is discussed.

RT-LAMP assay: an alternative approach for profiling of bovine heat shock protein 70 gene in PBMC cultured model.

PubMed

Sengar, Gyanendra Singh; Deb, Rajib; Raja, T V; Singh, Umesh; Kant, Rajiv; Bhanuprakash, V; Alyethodi, R R; Kumar, Sushil; Verma, Preetam; Chakraborty, Soumendu; Alex, Rani; Singh, Rani

2017-07-01

The purpose of this study is to develop a novel Reverse Transcriptase Loop-mediated isothermal amplification (RT-LAMP) based assay for in vitro profiling of heat shock protein 70 (Hsp70) in bovine peripheral blood mononuclear cell (PBMC) culture model utilizing the absorbance level of magnesium pyrophosphate-a by-product of LAMP reaction. A set of bovine Hsp70 specific RT-LAMP primers were designed to detect the differential absorbance level of magnesium pyrophosphate by-product which signifies the degree of Hsp70 amplification from cDNA of thermally induced cultured cells at different recovery periods. The study revealed significant (P < 0.05) correlation between absorbance level and the fold change of Hsp70 transcripts at different kinetic intervals of heat stress recovery in bovine PBMC cell culture models. RT-LAMP based absorbance assay can be used as an indicator to measure the degree of bovine Hsp70 transcripts produced during thermal stress and can be used as an alternative to the traditional Real time PCR assay. Developed RT-LAMP assay can be used as a cost-effective method for profiling of bovine HSP70 gene.

Transition of Suomi National Polar-Orbiting Partnership (S-NPP) Data Products for Operational Weather Forecasting Applications

NASA Technical Reports Server (NTRS)

Smith, Matthew R.; Molthan, Andrew L.; Fuell, Kevin K.; Jedlovec, Gary J.

2012-01-01

SPoRT is a team of NASA/NOAA scientists focused on demonstrating the utility of NASA and future NOAA data and derived products on improving short-term weather forecasts. Work collaboratively with a suite of unique products and selected WFOs in an end-to-end transition activity. Stable funding from NASA and NOAA. Recognized by the science community as the "go to" place for transitioning experimental and research data to the operational weather community. Endorsed by NWS ESSD/SSD chiefs. Proven paradigm for transitioning satellite observations and modeling capabilities to operations (R2O). SPoRT s transition of NASA satellite instruments provides unique or higher resolution data products to complement the baseline suite of geostationary data available to forecasters. SPoRT s partnership with NWS WFOs provides them with unique imagery to support disaster response and local forecast challenges. SPoRT has years of proven experience in developing and transitioning research products to the operational weather community. SPoRT has begun work with CONUS and OCONUS WFOs to determine the best products for maximum benefit to forecasters. VIIRS has already proven to be another extremely powerful tool, enhancing forecasters ability to handle difficult forecasting situations.

Spectral optical coherence tomography for ophthalmologic applications

NASA Astrophysics Data System (ADS)

Targowski, Piotr; Bajraszewski, Tomasz; Gorczyńska, Iwona; Szkulmowska, Anna; Szkulmowski, Maciej; Wojtkowski, Maciej; Kowalczyk, Andrzej; Kaluzny, Jakub J.; Kaluzny, Bartłomiej J.

2006-09-01

The overview of the Spectral Optical Coherence Tomography an alternative method to more popular Time domain modality is given. Examples from medical practice utilizing high resolution, ultra fast SOCT device are presented.

Scanning imaging absorption spectrometer for atmospheric chartography

NASA Technical Reports Server (NTRS)

Burrows, John P.; Chance, Kelly V.

1991-01-01

The SCanning Imaging Absorption SpectroMeter for Atmospheric CHartographY is an instrument which measures backscattered, reflected, and transmitted light from the earth's atmosphere and surface. SCIAMACHY has eight spectral channels which observe simultaneously the spectral region between 240 and 1700 nm and selected windows between 1940 and 2400 nm. Each spectral channel contains a grating and linear diode array detector. SCIAMACHY observes the atmosphere in nadir, limb, and solar and lunar occultation viewing geometries.

Chemical Markup, XML, and the World Wide Web. 7. CMLSpect, an XML vocabulary for spectral data.

PubMed

Kuhn, Stefan; Helmus, Tobias; Lancashire, Robert J; Murray-Rust, Peter; Rzepa, Henry S; Steinbeck, Christoph; Willighagen, Egon L

2007-01-01

CMLSpect is an extension of Chemical Markup Language (CML) for managing spectral and other analytical data. It is designed to be flexible enough to contain a wide variety of spectral data. The paper describes the CMLElements used and gives practical examples for common types of spectra. In addition it demonstrates how different views of the data can be expressed and what problems still exist.

Quad-polarized synthetic aperture radar and multispectral data classification using classification and regression tree and support vector machine-based data fusion system

NASA Astrophysics Data System (ADS)

Bigdeli, Behnaz; Pahlavani, Parham

2017-01-01

Interpretation of synthetic aperture radar (SAR) data processing is difficult because the geometry and spectral range of SAR are different from optical imagery. Consequently, SAR imaging can be a complementary data to multispectral (MS) optical remote sensing techniques because it does not depend on solar illumination and weather conditions. This study presents a multisensor fusion of SAR and MS data based on the use of classification and regression tree (CART) and support vector machine (SVM) through a decision fusion system. First, different feature extraction strategies were applied on SAR and MS data to produce more spectral and textural information. To overcome the redundancy and correlation between features, an intrinsic dimension estimation method based on noise-whitened Harsanyi, Farrand, and Chang determines the proper dimension of the features. Then, principal component analysis and independent component analysis were utilized on stacked feature space of two data. Afterward, SVM and CART classified each reduced feature space. Finally, a fusion strategy was utilized to fuse the classification results. To show the effectiveness of the proposed methodology, single classification on each data was compared to the obtained results. A coregistered Radarsat-2 and WorldView-2 data set from San Francisco, USA, was available to examine the effectiveness of the proposed method. The results show that combinations of SAR data with optical sensor based on the proposed methodology improve the classification results for most of the classes. The proposed fusion method provided approximately 93.24% and 95.44% for two different areas of the data.

The combined approach to lysis utilizing eptifibatide and rt-PA in acute ischemic stroke: the CLEAR stroke trial.

PubMed

Pancioli, Arthur M; Broderick, Joseph; Brott, Thomas; Tomsick, Thomas; Khoury, Jane; Bean, Judy; del Zoppo, Gregory; Kleindorfer, Dawn; Woo, Daniel; Khatri, Pooja; Castaldo, John; Frey, James; Gebel, James; Kasner, Scott; Kidwell, Chelsea; Kwiatkowski, Thomas; Libman, Richard; Mackenzie, Richard; Scott, Phillip; Starkman, Sidney; Thurman, R Jason

2008-12-01

Multiple approaches are being studied to enhance the rate of thrombolysis for acute ischemic stroke. Treatment of myocardial infarction with a combination of a reduced-dose fibrinolytic agent and a glycoprotein (GP) IIb/IIIa receptor antagonist has been shown to improve the rate of recanalization versus fibrinolysis alone. The combined approach to lysis utilizing eptifibatide and recombinant tissue-type plasminogen activator (rt-PA) (CLEAR) stroke trial assessed the safety of treating acute ischemic stroke patients within 3 hours of symptom onset with this combination. The CLEAR trial was a National Institutes of Health/National Institute of Neurological Disorders and Stroke-funded multicenter, double-blind, randomized, dose-escalation and safety study. Patients were randomized 3:1 to either low-dose rt-PA (tier 1=0.3 mg/kg, tier 2=0.45 mg/kg) plus eptifibatide (75 microg/kg bolus followed by 0.75 microg/kg per min infusion for 2 hours) or standard-dose rt-PA (0.9 mg/kg). The primary safety end point was the incidence of symptomatic intracerebral hemorrhage within 36 hours. Secondary analyses were performed regarding clinical efficacy. Ninety-four patients (40 in tier 1 and 54 in tier 2) were enrolled. The combination group of the 2 dose tiers (n=69) had a median age of 71 years and a median baseline National Institutes of Health Stroke Scale (NIHSS) score of 14, and the standard-dose rt-PA group (n=25) had a median age of 61 years and a median baseline NIHSS score of 10 (P=0.01 for NIHSS score). Fifty-two (75%) of the combination treatment group and 24 (96%) of the standard treatment group had a baseline modified Rankin scale score of 0 (P=0.04). There was 1 (1.4%; 95% CI, 0% to 4.3%) symptomatic intracranial hemorrhage in the combination group and 2 (8.0%; 95% CI, 0% to 19.2%) in the rt-PA-only arm (P=0.17). During randomization in tier 2, a review by the independent data safety monitoring board demonstrated that the safety profile of combination therapy at the tier 2 doses was such that further enrollment was statistically unlikely to indicate inadequate safety for the combination treatment group, the ultimate outcome of the study. Thus, the study was halted. There was a trend toward increased clinical efficacy of standard-dose rt-PA compared with the combination treatment group. The safety of the combination of reduced-dose rt-PA plus eptifibatide justifies further dose-ranging trials in acute ischemic stroke.

Primary treatments for clinically localised prostate cancer: a comprehensive lifetime cost-utility analysis.

PubMed

Cooperberg, Matthew R; Ramakrishna, Naren R; Duff, Steven B; Hughes, Kathleen E; Sadownik, Sara; Smith, Joseph A; Tewari, Ashutosh K

2013-03-01

WHAT'S KNOWN ON THE SUBJECT? AND WHAT DOES THE STUDY ADD?: Multiple treatment alternatives exist for localised prostate cancer, with few high-quality studies directly comparing their comparative effectiveness and costs. The present study is the most comprehensive cost-effectiveness analysis to date for localised prostate cancer, conducted with a lifetime horizon and accounting for survival, health-related quality-of-life, and cost impact of secondary treatments and other downstream events, as well as primary treatment choices. The analysis found minor differences, generally slightly favouring surgical methods, in quality-adjusted life years across treatment options. However, radiation therapy (RT) was consistently more expensive than surgery, and some alternatives, e.g. intensity-modulated RT for low-risk disease, were dominated - that is, both more expensive and less effective than competing alternatives. To characterise the costs and outcomes associated with radical prostatectomy (open, laparoscopic, or robot-assisted) and radiation therapy (RT: dose-escalated three-dimensional conformal RT, intensity-modulated RT, brachytherapy, or combination), using a comprehensive, lifetime decision analytical model. A Markov model was constructed to follow hypothetical men with low-, intermediate-, and high-risk prostate cancer over their lifetimes after primary treatment; probabilities of outcomes were based on an exhaustive literature search yielding 232 unique publications. In each Markov cycle, patients could have remission, recurrence, salvage treatment, metastasis, death from prostate cancer, and death from other causes. Utilities for each health state were determined, and disutilities were applied for complications and toxicities of treatment. Costs were determined from the USA payer perspective, with incorporation of patient costs in a sensitivity analysis. Differences across treatments in quality-adjusted life years across methods were modest, ranging from 10.3 to 11.3 for low-risk patients, 9.6-10.5 for intermediate-risk patients and 7.8-9.3 for high-risk patients. There were no statistically significant differences among surgical methods, which tended to be more effective than RT methods, with the exception of combined external beam + brachytherapy for high-risk disease. RT methods were consistently more expensive than surgical methods; costs ranged from $19 901 (robot-assisted prostatectomy for low-risk disease) to $50 276 (combined RT for high-risk disease). These findings were robust to an extensive set of sensitivity analyses. Our analysis found small differences in outcomes and substantial differences in payer and patient costs across treatment alternatives. These findings may inform future policy discussions about strategies to improve efficiency of treatment selection for localised prostate cancer. © 2012 BJU International.

Remote Pulsed Laser Raman Spectroscopy System for Detecting Qater, Ice, and Hydrous Minerals

NASA Technical Reports Server (NTRS)

Garcia, Christopher S.; Abedin, M. Nuraul; Sharma, Shiv K.; Misra, Anupam K.; Ismail, Syed; Singh, Upendra; Refaat, Tamer F.; Elsayed-Ali, Hani; Sandford, Steve

2006-01-01

For exploration of planetary surfaces, detection of water and ice is of great interest in supporting existence of life on other planets. Therefore, a remote Raman spectroscopy system was demonstrated at NASA Langley Research Center in collaboration with University of Hawaii for detecting ice-water and hydrous minerals on planetary surfaces. In this study, a 532 nm pulsed laser is utilized as an excitation source to allow detection in high background radiation conditions. The Raman scattered signal is collected by a 4-inch telescope positioned in front of a spectrograph. The Raman spectrum is analyzed using a spectrograph equipped with a holographic super notch filter to eliminate Rayleigh scattering, and a holographic transmission grating that simultaneously disperses two spectral tracks onto the detector for higher spectral range. To view the spectrum, the spectrograph is coupled to an intensified charge-coupled device (ICCD), which allows detection of very weak Stokes line. The ICCD is operated in gated mode to further suppress effects from background radiation and long-lived fluorescence. The sample is placed at 5.6 m from the telescope, and the laser is mounted on the telescope in a coaxial geometry to achieve maximum performance. The system was calibrated using the spectral lines of a Neon lamp source. To evaluate the system, Raman standard samples such as calcite, naphthalene, acetone, and isopropyl alcohol were analyzed. The Raman evaluation technique was used to analyze water, ice and other hydrous minerals and results from these species are presented.

Estimating wetland vegetation abundance from Landsat-8 operational land imager imagery: a comparison between linear spectral mixture analysis and multinomial logit modeling methods

NASA Astrophysics Data System (ADS)

Zhang, Min; Gong, Zhaoning; Zhao, Wenji; Pu, Ruiliang; Liu, Ke

2016-01-01

Mapping vegetation abundance by using remote sensing data is an efficient means for detecting changes of an eco-environment. With Landsat-8 operational land imager (OLI) imagery acquired on July 31, 2013, both linear spectral mixture analysis (LSMA) and multinomial logit model (MNLM) methods were applied to estimate and assess the vegetation abundance in the Wild Duck Lake Wetland in Beijing, China. To improve mapping vegetation abundance and increase the number of endmembers in spectral mixture analysis, normalized difference vegetation index was extracted from OLI imagery along with the seven reflective bands of OLI data for estimating the vegetation abundance. Five endmembers were selected, which include terrestrial plants, aquatic plants, bare soil, high albedo, and low albedo. The vegetation abundance mapping results from Landsat OLI data were finally evaluated by utilizing a WorldView-2 multispectral imagery. Similar spatial patterns of vegetation abundance produced by both fully constrained LSMA algorithm and MNLM methods were observed: higher vegetation abundance levels were distributed in agricultural and riparian areas while lower levels in urban/built-up areas. The experimental results also indicate that the MNLM model outperformed the LSMA algorithm with smaller root mean square error (0.0152 versus 0.0252) and higher coefficient of determination (0.7856 versus 0.7214) as the MNLM model could handle the nonlinear reflection phenomenon better than the LSMA with mixed pixels.

High prevalence of asymptomatic malaria infections: a cross-sectional study in rural areas in six departments in Haiti.

PubMed

Elbadry, Maha A; Al-Khedery, Basima; Tagliamonte, Massimiliano S; Yowell, Charles A; Raccurt, Christian P; Existe, Alexandre; Boncy, Jacques; Weppelmann, Thomas A; Beau De Rochars, Valery E M; Lemoine, Jean F; Okech, Bernard A; Dame, John B

2015-12-21

Public health measures are poised for transition from malaria control to malaria elimination on the island of Hispaniola. Assessment of the reservoir of asymptomatic infections from which acute malaria cases may derive is critical to plan and evaluate elimination efforts. Current field technology is ill suited for detecting sub-microscopic infections, thus highly sensitive survey methods capable of detecting virtually all infections are needed. In this study the prevalence of infection with Plasmodium falciparum was determined in patients seeking medical care primarily for non-febrile conditions in six departments in Haiti using a newly designed qRT-PCR-based assay. Three different methods of parasite detection were compared to assess their utility in approximating the prevalence of P. falciparum infections in the population: malaria rapid diagnostic test (RDT) designed to detect histidine-rich protein 2 (HRP2), thick smear microscopy, and a quantitative reverse transcription polymerase chain reaction (qRT-PCR) assay based upon the small sub-unit ribosomal RNA. The limit of detection of the qRT-PCR assay utilized was 0.0003 parasite/µL of blood. Venous blood was obtained from a total of 563 subjects from six departments in Haiti, all of whom were seeking medical attention without complaints consistent with malaria. Each subject was questioned for knowledge and behaviour using demographic and epidemiological survey to identify risk factors for disease transmission. Among the 563 samples tested, ten and 16 were found positive for malaria by RDT and microscopy, respectively. Using the qRT-PCR test to assess the infection status of these subjects, an additional 92 were identified for a total of 108. Based upon the qRT-PCR assay results, a wide variation in prevalence of infection in asymptomatic subjects was seen between geographic locations ranging from 4-41%. The prevalence of infection was highest in the Grand Anse, Nord and Sud-Est Departments, and demographic data from questionnaires provide evidence for focal disease transmission. The qRT-PCR assay is sufficiently sensitive to identify an unexpectedly large number of asymptomatic, submicroscopic infections. Identifying and clearing these infections presents a significant challenge to both control and elimination efforts, but the qRT-PCR assay offers a reliable method to identify them.

EL_PSSM-RT: DNA-binding residue prediction by integrating ensemble learning with PSSM Relation Transformation.

PubMed

Zhou, Jiyun; Lu, Qin; Xu, Ruifeng; He, Yulan; Wang, Hongpeng

2017-08-29

Prediction of DNA-binding residue is important for understanding the protein-DNA recognition mechanism. Many computational methods have been proposed for the prediction, but most of them do not consider the relationships of evolutionary information between residues. In this paper, we first propose a novel residue encoding method, referred to as the Position Specific Score Matrix (PSSM) Relation Transformation (PSSM-RT), to encode residues by utilizing the relationships of evolutionary information between residues. PDNA-62 and PDNA-224 are used to evaluate PSSM-RT and two existing PSSM encoding methods by five-fold cross-validation. Performance evaluations indicate that PSSM-RT is more effective than previous methods. This validates the point that the relationship of evolutionary information between residues is indeed useful in DNA-binding residue prediction. An ensemble learning classifier (EL_PSSM-RT) is also proposed by combining ensemble learning model and PSSM-RT to better handle the imbalance between binding and non-binding residues in datasets. EL_PSSM-RT is evaluated by five-fold cross-validation using PDNA-62 and PDNA-224 as well as two independent datasets TS-72 and TS-61. Performance comparisons with existing predictors on the four datasets demonstrate that EL_PSSM-RT is the best-performing method among all the predicting methods with improvement between 0.02-0.07 for MCC, 4.18-21.47% for ST and 0.013-0.131 for AUC. Furthermore, we analyze the importance of the pair-relationships extracted by PSSM-RT and the results validates the usefulness of PSSM-RT for encoding DNA-binding residues. We propose a novel prediction method for the prediction of DNA-binding residue with the inclusion of relationship of evolutionary information and ensemble learning. Performance evaluation shows that the relationship of evolutionary information between residues is indeed useful in DNA-binding residue prediction and ensemble learning can be used to address the data imbalance issue between binding and non-binding residues. A web service of EL_PSSM-RT ( http://hlt.hitsz.edu.cn:8080/PSSM-RT_SVM/ ) is provided for free access to the biological research community.

Development of a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) system for a highly sensitive detection of enterovirus in the stool samples of acute flaccid paralysis cases.

PubMed

Arita, Minetaro; Ling, Hua; Yan, Dongmei; Nishimura, Yorihiro; Yoshida, Hiromu; Wakita, Takaji; Shimizu, Hiroyuki

2009-12-16

In the global eradication program for poliomyelitis, the laboratory diagnosis plays a critical role by isolating poliovirus (PV) from the stool samples of acute flaccid paralysis (AFP) cases. In this study, we developed a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) system for a rapid and highly sensitive detection of enterovirus including PV to identify stool samples positive for enterovirus including PV. A primer set was designed for RT-LAMP to detect enterovirus preferably those with PV-like 5'NTRs of the viral genome. The sensitivity of RT-LAMP system was evaluated with prototype strains of enterovirus. Detection of enterovirus from stool extracts was examined by using RT-LAMP system. We detected at least 400 copies of the viral genomes of PV(Sabin) strains within 90 min by RT-LAMP with the primer set. This RT-LAMP system showed a preference for Human enterovirus species C (HEV-C) strains including PV, but exhibited less sensitivity to the prototype strains of HEV-A and HEV-B (detection limits of 7,400 to 28,000 copies). Stool extracts, from which PV, HEV-C, or HEV-A was isolated in the cell culture system, were mostly positive by RT-LAMP method (positive rates of 15/16 (= 94%), 13/14 (= 93%), and 4/4 (= 100%), respectively). The positive rate of this RT-LAMP system for stool extracts from which HEV-B was isolated was lower than that of HEV-C (positive rate of 11/21 (= 52%)). In the stool samples, which were negative for enterovirus isolation by the cell culture system, we found that two samples were positive for RT-LAMP (positive rates of 2/38 (= 5.3%)). In these samples, enterovirus 96 was identified by sequence analysis utilizing a seminested PCR system. RT-LAMP system developed in this study showed a high sensitivity comparable to that of the cell culture system for the detection of PV, HEV-A, and HEV-C, but less sensitivity to HEV-B. This RT-LAMP system would be useful for the direct detection of enterovirus from the stool extracts.

Evaluating the Contribution of NASA Remotely-Sensed Data Sets on a Convection-Allowing Forecast Model

NASA Technical Reports Server (NTRS)

Zavodsky, Bradley T.; Case, Jonathan L.; Molthan, Andrew L.

2012-01-01

The Short-term Prediction Research and Transition (SPoRT) Center is a collaborative partnership between NASA and operational forecasting partners, including a number of National Weather Service forecast offices. SPoRT provides real-time NASA products and capabilities to help its partners address specific operational forecast challenges. One challenge that forecasters face is using guidance from local and regional deterministic numerical models configured at convection-allowing resolution to help assess a variety of mesoscale/convective-scale phenomena such as sea-breezes, local wind circulations, and mesoscale convective weather potential on a given day. While guidance from convection-allowing models has proven valuable in many circumstances, the potential exists for model improvements by incorporating more representative land-water surface datasets, and by assimilating retrieved temperature and moisture profiles from hyper-spectral sounders. In order to help increase the accuracy of deterministic convection-allowing models, SPoRT produces real-time, 4-km CONUS forecasts using a configuration of the Weather Research and Forecasting (WRF) model (hereafter SPoRT-WRF) that includes unique NASA products and capabilities including 4-km resolution soil initialization data from the Land Information System (LIS), 2-km resolution SPoRT SST composites over oceans and large water bodies, high-resolution real-time Green Vegetation Fraction (GVF) composites derived from the Moderate-resolution Imaging Spectroradiometer (MODIS) instrument, and retrieved temperature and moisture profiles from the Atmospheric Infrared Sounder (AIRS) and Infrared Atmospheric Sounding Interferometer (IASI). NCAR's Model Evaluation Tools (MET) verification package is used to generate statistics of model performance compared to in situ observations and rainfall analyses for three months during the summer of 2012 (June-August). Detailed analyses of specific severe weather outbreaks during the summer will be presented to assess the potential added-value of the SPoRT datasets and data assimilation methodology compared to a WRF configuration without the unique datasets and data assimilation.

A Fast Visible Camera Divertor-Imaging Diagnostic on DIII-D

DOE Office of Scientific and Technical Information (OSTI.GOV)

Roquemore, A; Maingi, R; Lasnier, C

2007-06-19

In recent campaigns, the Photron Ultima SE fast framing camera has proven to be a powerful diagnostic when applied to imaging divertor phenomena on the National Spherical Torus Experiment (NSTX). Active areas of NSTX divertor research addressed with the fast camera include identification of types of EDGE Localized Modes (ELMs)[1], dust migration, impurity behavior and a number of phenomena related to turbulence. To compare such edge and divertor phenomena in low and high aspect ratio plasmas, a multi-institutional collaboration was developed for fast visible imaging on NSTX and DIII-D. More specifically, the collaboration was proposed to compare the NSTX smallmore » type V ELM regime [2] and the residual ELMs observed during Type I ELM suppression with external magnetic perturbations on DIII-D[3]. As part of the collaboration effort, the Photron camera was installed recently on DIII-D with a tangential view similar to the view implemented on NSTX, enabling a direct comparison between the two machines. The rapid implementation was facilitated by utilization of the existing optics that coupled the visible spectral output from the divertor vacuum ultraviolet UVTV system, which has a view similar to the view developed for the divertor tangential TV camera [4]. A remote controlled filter wheel was implemented, as was the radiation shield required for the DIII-D installation. The installation and initial operation of the camera are described in this paper, and the first images from the DIII-D divertor are presented.« less

Simple aerosol correction technique based on the spectral relationships of the aerosol multiple-scattering reflectances for atmospheric correction over the oceans.

PubMed

Ahn, Jae-Hyun; Park, Young-Je; Kim, Wonkook; Lee, Boram

2016-12-26

An estimation of the aerosol multiple-scattering reflectance is an important part of the atmospheric correction procedure in satellite ocean color data processing. Most commonly, the utilization of two near-infrared (NIR) bands to estimate the aerosol optical properties has been adopted for the estimation of the effects of aerosols. Previously, the operational Geostationary Color Ocean Imager (GOCI) atmospheric correction scheme relies on a single-scattering reflectance ratio (SSE), which was developed for the processing of the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) data to determine the appropriate aerosol models and their aerosol optical thicknesses. The scheme computes reflectance contributions (weighting factor) of candidate aerosol models in a single scattering domain then spectrally extrapolates the single-scattering aerosol reflectance from NIR to visible (VIS) bands using the SSE. However, it directly applies the weight value to all wavelengths in a multiple-scattering domain although the multiple-scattering aerosol reflectance has a non-linear relationship with the single-scattering reflectance and inter-band relationship of multiple scattering aerosol reflectances is non-linear. To avoid these issues, we propose an alternative scheme for estimating the aerosol reflectance that uses the spectral relationships in the aerosol multiple-scattering reflectance between different wavelengths (called SRAMS). The process directly calculates the multiple-scattering reflectance contributions in NIR with no residual errors for selected aerosol models. Then it spectrally extrapolates the reflectance contribution from NIR to visible bands for each selected model using the SRAMS. To assess the performance of the algorithm regarding the errors in the water reflectance at the surface or remote-sensing reflectance retrieval, we compared the SRAMS atmospheric correction results with the SSE atmospheric correction using both simulations and in situ match-ups with the GOCI data. From simulations, the mean errors for bands from 412 to 555 nm were 5.2% for the SRAMS scheme and 11.5% for SSE scheme in case-I waters. From in situ match-ups, 16.5% for the SRAMS scheme and 17.6% scheme for the SSE scheme in both case-I and case-II waters. Although we applied the SRAMS algorithm to the GOCI, it can be applied to other ocean color sensors which have two NIR wavelengths.

Japan Smoke

Atmospheric Science Data Center

2013-04-16

... is a stereoscopic "anaglyph" created from data in MISR's red spectral band, and generated by displaying the 46-degree backward view in red ... the surface. Viewing the anaglyph with red-cyan glasses (red filter over the left eye) gives a perception of height. No separation is ...

Dual Etalon Cross Tilt Order Sorted Spectrometer (DECTOSS)

NASA Astrophysics Data System (ADS)

Kumer, John B.; Rairden, Richard L.; Mitchell, Keith E.; Roche, Aidan E.; Mergenthaler, John L.

2002-11-01

The Dual Etalon Cross Tilt Order Sorted Spectrometer (DECTOSS) uses relatively inexpensive off the shelf components in a small and simple package to provide ultra high spectral resolution over a limited spectral range. For example, the modest first try laboratory test setup DECTOSS we describe in this presentation achieves resolving power ~ 105 on a spectral range of about 1 nm centered near 760 nm. This ultra high spectral resolution facilitates some important atmospheric remote sensing applications including profiling cirrus and/or aerosol above bright reflective surfaces in the O2 A-band and the column measurements of CO and CO2 utilizing solar reflectance spectra. We show details of the how the use of ultra high spectral resolution in the O2 A-band improves the profiling of cirrus and aerosol. The DECTOSS utilizes a Narrow Band Spectral Filter (NBSF), a Low Resolution Etalon (LRE) and a High Resolution Etalon (HRE). Light passing through these elements is focused on to a 2 Dimensional Array Detector (2DAD). Off the shelf, solid etalons with airgap or solid spacer gap are used in this application. In its simplest application this setup utilizes a spatially uniform extended source so that spatial and spectral structure are not confused. In this presentation we'll show 2D spectral data obtained in a desktop test configuration, and in the first try laboratory test setup. These were obtained by illuminating a Lambertian screen with (1) monochromatic light, and (2) with atmospheric absorption spectra in the oxygen (O2) A-band. Extracting the 1D spectra from these data is a work in progress and we show preliminary results compared with (1) solar absorption data obtained with a large Echelle grating spectrometer, and (2) theoretical spectra. We point out areas for improvement in our laboratory test setup, and general improvements in spectral range and sensitivity that are planned for our next generation field test setup.

Parameterization of MARVELS Spectra Using Deep Learning

NASA Astrophysics Data System (ADS)

Gilda, Sankalp; Ge, Jian; MARVELS

2018-01-01

Like many large-scale surveys, the Multi-Object APO Radial Velocity Exoplanet Large-area Survey (MARVELS) was designed to operate at a moderate spectral resolution ($\\sim$12,000) for efficiency in observing large samples, which makes the stellar parameterization difficult due to the high degree of blending of spectral features. Two extant solutions to deal with this issue are to utilize spectral synthesis, and to utilize spectral indices [Ghezzi et al. 2014]. While the former is a powerful and tested technique, it can often yield strongly coupled atmospheric parameters, and often requires high spectral resolution (Valenti & Piskunov 1996). The latter, though a promising technique utilizing measurements of equivalent widths of spectral indices, has only been employed with respect to FKG dwarfs and sub-giants and not red-giant branch stars, which constitute ~30% of MARVELS targets. In this work, we tackle this problem using a convolution neural network (CNN). In particular, we train a one-dimensional CNN on appropriately processed PHOENIX synthetic spectra using supervised training to automatically distinguish the features relevant for the determination of each of the three atmospheric parameters – T_eff, log(g), [Fe/H] – and use the knowledge thus gained by the network to parameterize 849 MARVELS giants. When tested on the synthetic spectra themselves, our estimates of the parameters were consistent to within 11 K, .02 dex, and .02 dex (in terms of mean absolute errors), respectively. For MARVELS dwarfs, the accuracies are 80K, .16 dex and .10 dex, respectively.

Interval between surgery and radiotherapy: effect on local control of soft tissue sarcoma.

PubMed

Ballo, Matthew T; Zagars, Gunar K; Cormier, Janice N; Hunt, Kelly K; Feig, Barry W; Patel, Shreyaskumar R; Pisters, Peter W T

2004-04-01

To evaluate the clinical significance of the interval between surgery and postoperative radiotherapy (RT) for patients with soft tissue sarcoma. The records of 799 patients who underwent postoperative RT for soft tissue sarcoma between 1960 and 2000 were retrospectively reviewed. Univariate and multivariate analyses were used to evaluate the potential impact of the timing of postoperative RT on the rate of local control (LC). The actuarial overall LC rate was 79% at 10 years and 78% at 15 years. Univariate analysis indicated that the factors associated with an inferior 10-year LC rate were positive resection margins (p <0.0001); treatment for recurrent disease (p <0.0001); primary location in the head and neck or deep trunk (p <0.0001); age >64 years (p <0.0001); histopathologic subtype of malignant fibrous histiocytoma, neurogenic sarcoma, or epithelioid sarcoma (p = 0.01); tumor size >10 cm (p = 0.02); postoperative radiation dose <64 Gy (p = 0.03); and high histologic grade (p = 0.05). On multivariate analysis, all these factors remained statistically significant, except for high histologic grade and large size. A delay between surgery and the start of RT of >30 days was associated with a decreased 10-year LC rate, but this association was not statistically significant (76% vs. 83%, p = 0.07). The potential association between RT delay and inferior LC could be explained by an imbalance in the distribution of other prognostic factors. The interval between surgery and RT did not significantly impact the 10-year LC rate. These findings indicate that an RT delay should not be viewed as an independent adverse factor for LC and that treatment intensification may not be necessary for patients in whom a treatment delay has already occurred.

DISTANT VIEW, AUTOMOTIVE REPAIR SHOP ON LEFT AND UTILITY BUILDING ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

DISTANT VIEW, AUTOMOTIVE REPAIR SHOP ON LEFT AND UTILITY BUILDING "B" ON RIGHT. HOSE WINDING SHED ADJACENT TO SHED-ROOFED ADDITION ON THE UTILITY BUILDING, BLM SEED SHED AND TACK SHED VISIBLE IN FAR DISTANCE. VIEW TO EAST/ - Cedar City Automotive Repair Shop, 820 North Main Street, Cedar City, Iron County, UT

DISTANT VIEW, UTILITY BUILDING "B" (EAST SIDE) ON LEFT AND ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

DISTANT VIEW, UTILITY BUILDING "B" (EAST SIDE) ON LEFT AND AUTOMOTIVE REPAIR SHOP (EAST SIDE) ON RIGHT. GASOLINE AND OIL HOUSE VISIBLE IN CENTER DISTANCE, FIRE DISPATCH OFFICES 1 AND 2 TO LEFT OF UTILITY BUILDING. VIEW TO WEST. - Cedar City Automotive Repair Shop, 820 North Main Street, Cedar City, Iron County, UT

There's Little Return for Attentional Momentum

ERIC Educational Resources Information Center

Snyder, Janice J.; Schmidt, William C.; Kingstone, Alan

2009-01-01

Inhibition of return (IOR) refers to a delay in response time (RT) to targets appearing at a previously cued location. The prevailing view is that IOR reflects visual-motor inhibition. The "attentional momentum" account rejects this idea, and instead proposes that IOR reflects an automatic shift of attention away from the cued location…

Long-Lag, Wide-pulse Gamma-Ray Bursts

NASA Technical Reports Server (NTRS)

Norris, J. P.; Bonnell, J. T.; Kazanas, D.; Scargie, J. D.; Hakkila, J.; Giblin, T. W.

2005-01-01

The best available probe of the early phase of gamma-ray burst (GRB) jet attributes is the prompt gamma-ray emission, in which several intrinsic and extrinsic variables determine observed GRB pulse evolution, including at least: jet opening angle, profiles of Lorentz factor and matter/field density, distance of emission region from central source, and viewing angle. Bright, usually complex bursts have many narrow pulses that are difficult to model due to overlap. However, the relatively simple, long spectral lag, wide-pulse bursts may have simpler physics and are easier to model. We have analyzed the temporal and spectral behavior of wide pulses in 24 long-lag bursts from the BATSE sample, using a pulse model with two shape parameters - width and asymmetry - and the Band spectral model with three shape parameters. We find that pulses in long-lag bursts are distinguished both temporally and spectrally from those in bright bursts: the pulses in long spectral lag bursts are few in number, and approximately 100 times wider (10s of seconds), have systemtically lower peaks in nu*F(nu), harder low-energy spectra and softer high-energy spectra. These five pulse descriptors are essentially uncorrelated for our long-lag sample, suggesting that at least approximately 5 parameters are needed to model burst temporal and spectral behavior, roughly commensurate with the theoretical phase space. However, we do find that pulse width is strongly correlated with spectral lag; hence these two parameters may be viewed as mutual surrogates. The prevalence of long-lag bursts near the BATSE trigger threshold, their predominantly low nu*F(nu) spectral peaks, and relatively steep upper power-law spectral indices indicate that Swiift will detect many such bursts.

Predicting High Health Care Resource Utilization in a Single-payer Public Health Care System: Development and Validation of the High Resource User Population Risk Tool (HRUPoRT).

PubMed

Rosella, Laura C; Kornas, Kathy; Yao, Zhan; Manuel, Douglas G; Bornbaum, Catherine; Fransoo, Randall; Stukel, Therese

2017-11-17

A large proportion of health care spending is incurred by a small proportion of the population. Population-based health planning tools that consider both the clinical and upstream determinants of high resource users (HRU) of the health system are lacking. To develop and validate the High Resource User Population Risk Tool (HRUPoRT), a predictive model of adults that will become the top 5% of health care users over a 5-year period, based on self-reported clinical, sociodemographic, and health behavioral predictors in population survey data. The HRUPoRT model was developed in a prospective cohort design using the combined 2005 and 2007/2008 Canadian Community Health Surveys (CCHS) (N=58,617), and validated using the external 2009/2010 CCHS cohort (N=28,721). Health care utilization for each of the 5 years following CCHS interview date were determined by applying a person-centered costing algorithm to the linked health administrative databases. Discrimination and calibration of the model were assessed using c-statistic and Hosmer-Lemeshow (HL) χ statistic. The best prediction model for 5-year transition to HRU status included 12 predictors and had good discrimination (c-statistic=0.8213) and calibration (HL χ=18.71) in the development cohort. The model performed similarly in the validation cohort (c-statistic=0.8171; HL χ=19.95). The strongest predictors in the HRUPoRT model were age, perceived general health, and body mass index. HRUPoRT can accurately project the proportion of individuals in the population that will become a HRU over 5 years. HRUPoRT can be applied to inform health resource planning and prevention strategies at the community level.This is an open-access article distributed under the terms of the Creative Commons Attribution-Non Commercial-No Derivatives License 4.0 (CCBY-NC-ND), where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc-nd/4.0/.

Spectral response of fiber-coupled Fabry-Perot etalons.

PubMed

Ionov, Pavel

2014-03-01

In many remote sensing applications one or multiple Fabry-Perot etalons are used as high-spectral-resolution filter elements. These etalons are often coupled to a receiving telescope with a multimode fiber, leading to subtle effects of the fiber mode order on the overall spectral response of the system. A theoretical model is developed to treat the spectral response of the combined system: fiber, collimator, and etalon. The method is based on a closed-form expression of the diffracted mode in terms of a Hankel transform. In this representation, it is shown how the spectral effect of the fiber and collimator can be separated from the details of the etalon and can be viewed as a mode-dependent spectral broadening and shift.

Gaze shifts during dual-tasking stair descent.

PubMed

Miyasike-daSilva, Veronica; McIlroy, William E

2016-11-01

To investigate the role of vision in stair locomotion, young adults descended a seven-step staircase during unrestricted walking (CONTROL), and while performing a concurrent visual reaction time (RT) task displayed on a monitor. The monitor was located at either 3.5 m (HIGH) or 0.5 m (LOW) above ground level at the end of the stairway, which either restricted (HIGH) or facilitated (LOW) the view of the stairs in the lower field of view as participants walked downstairs. Downward gaze shifts (recorded with an eye tracker) and gait speed were significantly reduced in HIGH and LOW compared with CONTROL. Gaze and locomotor behaviour were not different between HIGH and LOW. However, inter-individual variability increased in HIGH, in which participants combined different response characteristics including slower walking, handrail use, downward gaze, and/or increasing RTs. The fastest RTs occurred in the midsteps (non-transition steps). While gait and visual task performance were not statistically different prior to the top and bottom transition steps, gaze behaviour and RT were more variable prior to transition steps in HIGH. This study demonstrated that, in the presence of a visual task, people do not look down as often when walking downstairs and require minimum adjustments provided that the view of the stairs is available in the lower field of view. The middle of the stairs seems to require less from executive function, whereas visual attention appears a requirement to detect the last transition via gaze shifts or peripheral vision.

Retinal Spectral Domain Optical Coherence Tomography in Early Atrophic Age-Related Macular Degeneration (AMD) and a New Metric for Objective Evaluation of the Efficacy of Ocular Nutrition

PubMed Central

Richer, Stuart; Cho, Jane; Stiles, William; Levin, Marc; Wrobel, James S.; Sinai, Michael; Thomas, Carla

2012-01-01

Purpose: A challenge in ocular preventive medicine is identification of patients with early pathological retinal damage that might benefit from nutritional intervention. The purpose of this study is to evaluate retinal thinning (RT) in early atrophic age-related macular degeneration (AMD) against visual function data from the Zeaxanthin and Visual Function (ZVF) randomized double masked placebo controlled clinical trial (FDA IND #78973). Methods: Retrospective, observational case series of medical center veterans with minimal visible AMD retinopathy (AREDS Report #18 simplified grading 1.4/4.0 bilateral retinopathy). Foveal and extra-foveal four quadrant SDOCT RT measurements were evaluated in n = 54 clinical and ZVF AMD patients. RT by age was determined and compared to the OptoVue SD OCT normative database. RT by quadrant in a subset of n = 29 ZVF patients was correlated with contrast sensitivity and parafoveal blue cone increment thresholds. Results: Foveal RT in AMD patients and non-AMD patients was preserved with age. Extrafoveal regions, however, showed significant slope differences between AMD patients and non-AMD patients, with the superior and nasal quadrants most vulnerable to retinal thinning (sup quad: −5.5 μm/decade thinning vs. Non-AMD: −1.1 μm/decade, P < 0.02; nasal quad: −5.0 μm/decade thinning vs. Non-AMD: −1.0 μm/decade, P < 0.04). Two measures of extrafoveal visual deterioration were correlated: A significant inverse correlation between % RT and contrast sensitivity (r = −0.33, P = 0.01, 2 Tailed Paired T) and an elevated extrafoveal increment blue cone threshold (r = +0.34, P = 0.01, 2 Tailed T). Additional SD OCT RT data for the non-AMD oldest age group (ages 82–91) is needed to fully substantiate the model. Conclusion: A simple new SD OCT clinical metric called “% extra-foveal RT” correlates well with functional visual loss in early AMD patients having minimal visible retinopathy. This metric can be used to follow the effect of repleting ocular nutrients, such as zinc, antioxidants, carotenoids, n-3 essential fats , resveratrol and vitamin D. PMID:23363992

The Use of NASA near Real-time and Archived Satellite Data to Support Disaster Assessment

NASA Technical Reports Server (NTRS)

McGrath, Kevin M.; Molthan, Andrew; Burks, Jason

2014-01-01

With support from a NASA's Applied Sciences Program, The Short-term Prediction Research and Transition (SPoRT) Center has explored a variety of techniques for utilizing archived and near real-time NASA satellite data to support disaster assessment activities. MODIS data from the NASA Land Atmosphere Near Real-time Capability for EOS currently provides true color and other imagery for assessment and potential applications including, but not limited to, flooding, fires, and tornadoes. In May 2013, the SPoRT Center developed unique power outage composites using the VIIRS Day/Night Band to represent the first clear sky view of damage inflicted upon Moore and Oklahoma City, Oklahoma following the devastating EF-5 tornado that occurred on May 20. Pre-event imagery provided by the NASA funded Web-Enabled Landsat Data project offer a basis of comparison for monitoring post-disaster recovery efforts. Techniques have also been developed to generate products from higher resolution imagery from the recently available International Space Station SERVIR Environmental Research and Visualization System instrument. Of paramount importance is to deliver these products to end users expeditiously and in formats compatible with Decision Support Systems (DSS). Delivery techniques include a Tile Map Service (TMS) and a Web Mapping Service (WMS). These mechanisms allow easy integration of satellite products into DSS's, including the National Weather Service's Damage Assessment Toolkit for use by personnel conducting damage surveys. This poster will present an overview of the developed techniques and products and compare the strengths and weaknesses of the TMS and WMS.

Semi-automatic classification of glaciovolcanic landforms: An object-based mapping approach based on geomorphometry

NASA Astrophysics Data System (ADS)

Pedersen, G. B. M.

2016-02-01

A new object-oriented approach is developed to classify glaciovolcanic landforms (Procedure A) and their landform elements boundaries (Procedure B). It utilizes the principle that glaciovolcanic edifices are geomorphometrically distinct from lava shields and plains (Pedersen and Grosse, 2014), and the approach is tested on data from Reykjanes Peninsula, Iceland. The outlined procedures utilize slope and profile curvature attribute maps (20 m/pixel) and the classified results are evaluated quantitatively through error matrix maps (Procedure A) and visual inspection (Procedure B). In procedure A, the highest obtained accuracy is 94.1%, but even simple mapping procedures provide good results (> 90% accuracy). Successful classification of glaciovolcanic landform element boundaries (Procedure B) is also achieved and this technique has the potential to delineate the transition from intraglacial to subaerial volcanic activity in orthographic view. This object-oriented approach based on geomorphometry overcomes issues with vegetation cover, which has been typically problematic for classification schemes utilizing spectral data. Furthermore, it handles complex edifice outlines well and is easily incorporated into a GIS environment, where results can be edited or fused with other mapping results. The approach outlined here is designed to map glaciovolcanic edifices within the Icelandic neovolcanic zone but may also be applied to similar subaerial or submarine volcanic settings, where steep volcanic edifices are surrounded by flat plains.

Optimal location of radiation therapy centers with respect to geographic access.

PubMed

Santibáñez, Pablo; Gaudet, Marc; French, John; Liu, Emma; Tyldesley, Scott

2014-07-15

To develop a framework with which to evaluate locations of radiation therapy (RT) centers in a region based on geographic access. Patient records were obtained for all external beam radiation therapy started in 2011 for the province of British Columbia, Canada. Two metrics of geographic access were defined. The primary analysis was percentage of patients (coverage) within a 90-minute drive from an RT center (C90), and the secondary analysis was the average drive time (ADT) to an RT center. An integer programming model was developed to determine optimal center locations, catchment areas, and capacity required under different scenarios. Records consisted of 11,096 courses of radiation corresponding to 161,616 fractions. Baseline geographic access was estimated at 102.5 minutes ADT (each way, per fraction) and 75.9% C90. Adding 2 and 3 new centers increased C90 to 88% and 92%, respectively, and decreased ADT by between 43% and 61%, respectively. A scenario in which RT was provided in every potential location that could support at least 1 fully utilized linear accelerator resulted in 35.3 minutes' ADT and 93.6% C90. The proposed framework and model provide a data-driven means to quantitatively evaluate alternative configurations of a regional RT system. Results suggest that the choice of location for future centers can significantly improve geographic access to RT. Copyright © 2014 The Authors. Published by Elsevier Inc. All rights reserved.

Colorado Lightning Mapping Array Collaborations through the GOES-R Visiting Scientist Program

NASA Technical Reports Server (NTRS)

Stano, Geoffrey T.; Szoke, Edward; Rydell, Nezette; Cox, Robert; Mazur, Rebecca

2014-01-01

For the past two years, the GOES-R Proving Ground has solicited proposals for its Visiting Scientist Program. NASA's Short-term Prediction Research and Transition (SPoRT) Center has used this opportunity to support the GOES-R Proving Ground by expanding SPoRT's total lightning collaborations. In 2012, this expanded the evaluation of SPoRT's pseudo-geostationary lightning mapper product to the Aviation Weather Center and Storm Prediction Center. This year, SPoRT has collaborated with the Colorado Lightning Mapping Array (COLMA) and potential end users. In particular, SPoRT is collaborating with the Cooperative Institute for Research in the Atmosphere (CIRA) and Colorado State University (CSU) to obtain these data in real-time. From there, SPoRT is supporting the transition of these data to the local forecast offices in Boulder, Colorado and Cheyenne, Wyoming as well as to Proving Ground projects (e.g., the Hazardous Weather Testbed's Spring Program and Aviation Weather Center's Summer Experiment). This presentation will focus on the results of this particular Visiting Scientist Program trip. In particular, the COLMA data are being provided to both forecast offices for initial familiarization. Additionally, several forecast issues have been highlighted as important uses for COLMA data in the operational environment. These include the utility of these data for fire weather situations, situational awareness for both severe weather and lightning safety, and formal evaluations to take place in the spring of 2014.

Modeling qRT-PCR dynamics with application to cancer biomarker quantification.

PubMed

Chervoneva, Inna; Freydin, Boris; Hyslop, Terry; Waldman, Scott A

2017-01-01

Quantitative reverse transcription polymerase chain reaction (qRT-PCR) is widely used for molecular diagnostics and evaluating prognosis in cancer. The utility of mRNA expression biomarkers relies heavily on the accuracy and precision of quantification, which is still challenging for low abundance transcripts. The critical step for quantification is accurate estimation of efficiency needed for computing a relative qRT-PCR expression. We propose a new approach to estimating qRT-PCR efficiency based on modeling dynamics of polymerase chain reaction amplification. In contrast, only models for fluorescence intensity as a function of polymerase chain reaction cycle have been used so far for quantification. The dynamics of qRT-PCR efficiency is modeled using an ordinary differential equation model, and the fitted ordinary differential equation model is used to obtain effective polymerase chain reaction efficiency estimates needed for efficiency-adjusted quantification. The proposed new qRT-PCR efficiency estimates were used to quantify GUCY2C (Guanylate Cyclase 2C) mRNA expression in the blood of colorectal cancer patients. Time to recurrence and GUCY2C expression ratios were analyzed in a joint model for survival and longitudinal outcomes. The joint model with GUCY2C quantified using the proposed polymerase chain reaction efficiency estimates provided clinically meaningful results for association between time to recurrence and longitudinal trends in GUCY2C expression.

Toward a High-Efficient Utilization of Solar Radiation by Quad-Band Solar Spectral Splitting.

PubMed

Cao, Feng; Huang, Yi; Tang, Lu; Sun, Tianyi; Boriskina, Svetlana V; Chen, Gang; Ren, Zhifeng

2016-12-01

The promising quad-band solar spectral splitter incorporates the properties of the optical filter and the spectrally selective solar thermal absorber can direct PV band to PV modules and absorb thermal band energy for thermal process with low thermal losses. It provides a new strategy for spectral splitting and offers potential ways for hybrid PVT system design. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

TU-D-209-01: Dosimetry of Diagnostic Work Up Mammography

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jallow, N; Sechopoulos, I

2016-06-15

Purpose: To investigate patient average glandular dose (AGD) characteristics of diagnostic mammography. Methods: The techniques used to image 14420 patients who received diagnostic work up mammography from October 2008 to December 2014 at one academic hospital were retrospectively collected. The most common diagnostic views and the techniques used for each according to compressed breast thickness were determined. For all techniques, 1st half value layer and air kerma output per tube current-exposure time product were measured; then the incident air kerma for each acquisition was calculated. The values for normalized glandular dose (DgN) were obtained with a validated Monte Carlo simulationmore » of mammographic acquisition. The mono-energetic DgN results were combined according to relative fluence using the TASMICS model to obtain DgN coefficients for each spectrum. The spectral DgN and calculated incident air kerma were used to estimate AGD of patients with breast thickness ranging from 2 to 8 cm. Results: The most common views utilized during diagnostic mammography were magnification craniocaudal (24%), magnification mediolateral (19%), spot craniocaudal (28%), and spot mediolateral oblique (24%). The AGD increased with increasing breast thickness for both the magnification and spot views. The AGD for a 5.5 cm thick breast was approximately 6.8 mGy and 2.2 mGy for the magnification and spot views, respectively. The AGD ranged from 3.6 mGy to 6.8 mGy for the magnification views and from 1.0 mGy to 3.1 mGy for spot views. The difference in AGD between the two magnification views or the two spot views was not significant. Conclusion: These results provide information on breast dose to which screening recalled women are exposed to. In addition to understanding the dose used for common clinical imaging tests, this data could be used when comparing use of mammography for diagnostic workup to other potential modalities, such as breast tomosynthesis and breast CT.« less

Compact full-motion video hyperspectral cameras: development, image processing, and applications

NASA Astrophysics Data System (ADS)

Kanaev, A. V.

2015-10-01

Emergence of spectral pixel-level color filters has enabled development of hyper-spectral Full Motion Video (FMV) sensors operating in visible (EO) and infrared (IR) wavelengths. The new class of hyper-spectral cameras opens broad possibilities of its utilization for military and industry purposes. Indeed, such cameras are able to classify materials as well as detect and track spectral signatures continuously in real time while simultaneously providing an operator the benefit of enhanced-discrimination-color video. Supporting these extensive capabilities requires significant computational processing of the collected spectral data. In general, two processing streams are envisioned for mosaic array cameras. The first is spectral computation that provides essential spectral content analysis e.g. detection or classification. The second is presentation of the video to an operator that can offer the best display of the content depending on the performed task e.g. providing spatial resolution enhancement or color coding of the spectral analysis. These processing streams can be executed in parallel or they can utilize each other's results. The spectral analysis algorithms have been developed extensively, however demosaicking of more than three equally-sampled spectral bands has been explored scarcely. We present unique approach to demosaicking based on multi-band super-resolution and show the trade-off between spatial resolution and spectral content. Using imagery collected with developed 9-band SWIR camera we demonstrate several of its concepts of operation including detection and tracking. We also compare the demosaicking results to the results of multi-frame super-resolution as well as to the combined multi-frame and multiband processing.

How does C-VIEW image quality compare with conventional 2D FFDM?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nelson, Jeffrey S., E-mail: nelson.jeffrey@duke.edu; Wells, Jered R.; Baker, Jay A.

Purpose: The FDA approved the use of digital breast tomosynthesis (DBT) in 2011 as an adjunct to 2D full field digital mammography (FFDM) with the constraint that all DBT acquisitions must be paired with a 2D image to assure adequate interpretative information is provided. Recently manufacturers have developed methods to provide a synthesized 2D image generated from the DBT data with the hope of sparing patients the radiation exposure from the FFDM acquisition. While this much needed alternative effectively reduces the total radiation burden, differences in image quality must also be considered. The goal of this study was to comparemore » the intrinsic image quality of synthesized 2D C-VIEW and 2D FFDM images in terms of resolution, contrast, and noise. Methods: Two phantoms were utilized in this study: the American College of Radiology mammography accreditation phantom (ACR phantom) and a novel 3D printed anthropomorphic breast phantom. Both phantoms were imaged using a Hologic Selenia Dimensions 3D system. Analysis of the ACR phantom includes both visual inspection and objective automated analysis using in-house software. Analysis of the 3D anthropomorphic phantom includes visual assessment of resolution and Fourier analysis of the noise. Results: Using ACR-defined scoring criteria for the ACR phantom, the FFDM images scored statistically higher than C-VIEW according to both the average observer and automated scores. In addition, between 50% and 70% of C-VIEW images failed to meet the nominal minimum ACR accreditation requirements—primarily due to fiber breaks. Software analysis demonstrated that C-VIEW provided enhanced visualization of medium and large microcalcification objects; however, the benefits diminished for smaller high contrast objects and all low contrast objects. Visual analysis of the anthropomorphic phantom showed a measureable loss of resolution in the C-VIEW image (11 lp/mm FFDM, 5 lp/mm C-VIEW) and loss in detection of small microcalcification objects. Spectral analysis of the anthropomorphic phantom showed higher total noise magnitude in the FFDM image compared with C-VIEW. Whereas the FFDM image contained approximately white noise texture, the C-VIEW image exhibited marked noise reduction at midfrequency and high frequency with far less noise suppression at low frequencies resulting in a mottled noise appearance. Conclusions: Their analysis demonstrates many instances where the C-VIEW image quality differs from FFDM. Compared to FFDM, C-VIEW offers a better depiction of objects of certain size and contrast, but provides poorer overall resolution and noise properties. Based on these findings, the utilization of C-VIEW images in the clinical setting requires careful consideration, especially if considering the discontinuation of FFDM imaging. Not explicitly explored in this study is how the combination of DBT + C-VIEW performs relative to DBT + FFDM or FFDM alone.« less

Disk-averaged synthetic spectra of Mars

NASA Technical Reports Server (NTRS)

Tinetti, Giovanna; Meadows, Victoria S.; Crisp, David; Fong, William; Velusamy, Thangasamy; Snively, Heather

2005-01-01

The principal goal of the NASA Terrestrial Planet Finder (TPF) and European Space Agency's Darwin mission concepts is to directly detect and characterize extrasolar terrestrial (Earthsized) planets. This first generation of instruments is expected to provide disk-averaged spectra with modest spectral resolution and signal-to-noise. Here we use a spatially and spectrally resolved model of a Mars-like planet to study the detectability of a planet's surface and atmospheric properties from disk-averaged spectra. We explore the detectability as a function of spectral resolution and wavelength range, for both the proposed visible coronograph (TPFC) and mid-infrared interferometer (TPF-I/Darwin) architectures. At the core of our model is a spectrum-resolving (line-by-line) atmospheric/surface radiative transfer model. This model uses observational data as input to generate a database of spatially resolved synthetic spectra for a range of illumination conditions and viewing geometries. The model was validated against spectra recorded by the Mars Global Surveyor-Thermal Emission Spectrometer and the Mariner 9-Infrared Interferometer Spectrometer. Results presented here include disk-averaged synthetic spectra, light curves, and the spectral variability at visible and mid-infrared wavelengths for Mars as a function of viewing angle, illumination, and season. We also considered the differences in the spectral appearance of an increasingly ice-covered Mars, as a function of spectral resolution, signal-to-noise and integration time for both TPF-C and TPFI/ Darwin.

Disk-averaged synthetic spectra of Mars.

PubMed

Tinetti, Giovanna; Meadows, Victoria S; Crisp, David; Fong, William; Velusamy, Thangasamy; Snively, Heather

2005-08-01

The principal goal of the NASA Terrestrial Planet Finder (TPF) and European Space Agency's Darwin mission concepts is to directly detect and characterize extrasolar terrestrial (Earthsized) planets. This first generation of instruments is expected to provide disk-averaged spectra with modest spectral resolution and signal-to-noise. Here we use a spatially and spectrally resolved model of a Mars-like planet to study the detectability of a planet's surface and atmospheric properties from disk-averaged spectra. We explore the detectability as a function of spectral resolution and wavelength range, for both the proposed visible coronograph (TPFC) and mid-infrared interferometer (TPF-I/Darwin) architectures. At the core of our model is a spectrum-resolving (line-by-line) atmospheric/surface radiative transfer model. This model uses observational data as input to generate a database of spatially resolved synthetic spectra for a range of illumination conditions and viewing geometries. The model was validated against spectra recorded by the Mars Global Surveyor-Thermal Emission Spectrometer and the Mariner 9-Infrared Interferometer Spectrometer. Results presented here include disk-averaged synthetic spectra, light curves, and the spectral variability at visible and mid-infrared wavelengths for Mars as a function of viewing angle, illumination, and season. We also considered the differences in the spectral appearance of an increasingly ice-covered Mars, as a function of spectral resolution, signal-to-noise and integration time for both TPF-C and TPFI/ Darwin.

EGRET observations of the BL Lacertae objects 0716+714 and 0521-365

NASA Technical Reports Server (NTRS)

Lin, Y. C.; Bertsch, D. L.; Dingus, B. L.; Esposito, J. A.; Fichtel, C. E.; Hartman, R. C.; Hunter, S. D.; Kanbach, G.; Kniffen, D. A.; Mayer-Hasselwander, H. A.

1995-01-01

During the Compton Observatory's viewing programs Phase 1 (1991 April to 1992 November, also known as the All-Sky Survey) and Phase 2 (1992 November to 1993 September), the BL Lac object 0716+714 was in the field of view of the EGRET telescope a total of six times, three times in Phase 1 and three more times in Phase 2, while the BL Lac object 0521-365 was in the field of view of EGRET only once in Phase 1. The source 0716+714 was detected in high-energy gamma rays by EGRET at a flux level of (2.0 +/- 0.4) x 10(exp -7) photons/sq cm/s for E greater than 100 MeV with a 6 sigma significance when it was first observed by EGRET in 1992 January 10 to 23. The corresponding spectral slope of the photon number distribution is determined to be -2.04 +/- 0.33. The gamma-ray flux of 0716+714 showed considerable time variability in subsequent EGRET observations. But the spectral slope stayed about the same within the statistical uncertainties of the EGRET data. The average spectral slope of the four viewing periods during which the photon flux of 0716+714 stayed above the EGRET detection threshold is found to be -1.85 +/- 0.20 from the combined data. The source 0521+365 was detected by EGRET in 1992 May 14 to June 4 at a flux level of (1.8 +/- 0.5) x 10(exp -7) photons/sq cm/s for E greater than 100 MeV with a 4 sigma significance. The corresponding spectral slope of the photon number distribution is found to be 2.16 +/- 0.36. Details of the observations of these two BL Lac objects with the EGRET telescope are presented.

The Calibration of the DSCOVR EPIC Multiple Visible Channel Instrument Using MODIS and VIIRS as a Reference

NASA Technical Reports Server (NTRS)

Haney, Conor; Doeling, David; Minnis, Patrick; Bhatt, Rajendra; Scarino, Benjamin; Gopalan, Arun

2016-01-01

The Deep Space Climate Observatory (DSCOVR), launched on 11 February 2015, is a satellite positioned near the Lagrange-1 (L1) point, carrying several instruments that monitor space weather, and Earth-view sensors designed for climate studies. The Earth Polychromatic Imaging Camera (EPIC) onboard DSCOVR continuously views the sun-illuminated portion of the Earth with spectral coverage in the UV, VIS, and NIR bands. Although the EPIC instrument does not have any onboard calibration abilities, its constant view of the sunlit Earth disk provides a unique opportunity for simultaneous viewing with several other satellite instruments. This arrangement allows the EPIC sensor to be inter-calibrated using other well-characterized satellite instrument reference standards. Two such instruments with onboard calibration are MODIS, flown on Aqua and Terra, and VIIRS, onboard Suomi-NPP. The MODIS and VIIRS reference calibrations will be transferred to the EPIC instrument using both all-sky ocean and deep convective clouds (DCC) ray-matched EPIC and MODIS/VIIRS radiance pairs. An automated navigation correction routine was developed to more accurately align the EPIC and MODIS/VIIRS granules. The automated navigation correction routine dramatically reduced the uncertainty of the resulting calibration gain based on the EPIC and MODIS/VIIRS radiance pairs. The SCIAMACHY-based spectral band adjustment factors (SBAF) applied to the MODIS/ VIIRS radiances were found to successfully adjust the reference radiances to the spectral response of the specific EPIC channel for over-lapping spectral channels. The SBAF was also found to be effective for the non-overlapping EPIC channel 10. Lastly, both ray-matching techniques found no discernable trends for EPIC channel 7 over the year of publically released EPIC data.

DISTANCE VIEW, AUTOMOTIVE REPAIR SHOP ON LEFT AND UTILITY BUILDING ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

DISTANCE VIEW, AUTOMOTIVE REPAIR SHOP ON LEFT AND UTILITY BUILDING "B" ON RIGHT. HOSE WINDING SHED ADJACENT TO SHED-ROOFED ADDITION ON THE UTILITY BUILDING, BLM SEED SHED AND TACK SHED VISIBLE IN FAR DISTANCE. VIEW TO EAST, WITH SCALE. - Cedar City Automotive Repair Shop, 820 North Main Street, Cedar City, Iron County, UT

Management of elderly patients with glioblastoma-multiforme-a systematic review.

PubMed

Almadani, Asmaa; Sanjay, Dixit; Chris, Rowland-Hill; Shailendra, Achawal; Chitoor, Rajaraman; Gerry, O'Reilly; Robin, Highley; Masood, Hussain; Louise, Baker; Lynne, Gill; Holly, Morris; Mohan, Hingorani

2018-03-09

The management of elderly patients with glioblastoma-multiforme (GBM) remains poorly defined with many experts in the past advocating best supportive care, in view of limited evidence on efficacy of more aggressive treatment protocols. There is randomised evidence (NORDIC and NA-O8 studies) to support the use of surgery followed by adjuvant monotherapy with either radiotherapy (RT) using hypofractionated regimes (e.g. 36 Gy in 6 fractions OR 40 Gy in 15 fractions) or chemotherapy with temozolomide (TMZ) in patients expressing methylation of promoter for O 6 -methylguanine-DNA methyltransferase enzyme. However, the role of combined-modality therapy involving the use of combined RT and TMZ protocols has remained controversial with data from the EORTC (European Organisation for Research and Treatment of Cancer)-NCIC (National Cancer Institute of Canada) studies indicating that patients more than 65 years of age may not benefit significantly from combining standard RT fractionation using 60 Gy in 30 fractions with concurrent and adjuvant TMZ. More recently, randomised data has emerged on combining hypofractionated RT with concurrent and adjuvant TMZ. We provide a comprehensive review of literature with the aim of defining an evidence-based algorithm for management of elderly glioblastoma-multiforme population.

A mechanical simulator of cardiac wall kinematics.

PubMed

Cutrì, Elena; Bagnoli, Paola; Marcelli, Emanuela; Biondi, Federico; Cercenelli, Laura; Costantino, Maria Laura; Plicchi, Gianni; Fumero, Roberto

2010-01-01

Aim of this study is to develop a mechanical simulator (MS) reproducing cardiac wall kinematics [i.e., radial (R), longitudinal (L) and rotational (RT) motions] to test piezoelectric gyroscopic sensors (GS) that are able to measure cardiac torsion that has proved to be a sensitive index of cardiac performance. The MS consists of three brushless motors controlled by a dedicated software either separately or simultaneously reproducing the three main cardiac wall movements (R, L, RT) obtained by implementing different physiologic or pathologic velocity profiles derived from in vivo data. GS accuracy (max % error) was experimentally tested by connecting it to the MS driven in velocity in different working conditions [i.e., cardiac period (515-1030 ms), RT angle (4-16 degrees), GS axis inclination (0-90 degrees) with respect to the cardiac rotation axis]. The MS reproduced the tested velocity profiles well. The GS showed high accuracy in measuring both physiologic and pathologic RT velocity profiles, whereas they proved insensitive to R and L motions. GS axis inclination influenced measurements; however, it was possible to correct this taking the inclination angle cosine into account. The MS proved to be a useful tool to study cardiac wall kinematics and test GS reliability with a view to in vivo application.

Management of Malignant Pleural Effusion: A Cost-Utility Analysis.

PubMed

Shafiq, Majid; Frick, Kevin D; Lee, Hans; Yarmus, Lonny; Feller-Kopman, David J

2015-07-01

Malignant pleural effusion (MPE) is associated with a significant impact on health-related quality of life. Palliative interventions abound, with varying costs and degrees of invasiveness. We examined the relative cost-utility of 5 therapeutic alternatives for MPE among adults. Original studies investigating the management of MPE were extensively researched, and the most robust and current data particularly those from the TIME2 trial were chosen to estimate event probabilities. Medicare data were used for cost estimation. Utility estimates were adapted from 2 original studies and kept consistent with prior estimations. The decision tree model was based on clinical guidelines and authors' consensus opinion. Primary outcome of interest was the incremental cost-effectiveness ratio for each intervention over a less effective alternative over an analytical horizon of 6 months. Given the paucity of data on rapid pleurodesis protocol, a sensitivity analysis was conducted to address the uncertainty surrounding its efficacy in terms of achieving long-term pleurodesis. Except for repeated thoracentesis (RT; least effective), all interventions had similar effectiveness. Tunneled pleural catheter was the most cost-effective option with an incremental cost-effectiveness ratio of $45,747 per QALY gained over RT, assuming a willingness-to-pay threshold of $100,000/QALY. Multivariate sensitivity analysis showed that rapid pleurodesis protocol remained cost-ineffective even with an estimated probability of lasting pleurodesis up to 85%. Tunneled pleural catheter is the most cost-effective therapeutic alternative to RT. This, together with its relative convenience (requiring neither hospitalization nor thoracoscopic procedural skills), makes it an intervention of choice for MPE.

The Research on the Spectral Characteristics of Sea Fog Based on Caliop and Modis Data

NASA Astrophysics Data System (ADS)

Wan, J.; Su, J.; Liu, S.; Sheng, H.

2018-04-01

In view of that difficulty of distinguish between sea fog and low cloud by optical remote sensing mean, the research on spectral characteristics of sea fog is focused and carried out. The satellite laser radar CALIOP data and the high spectral MODIS data were obtained from May to December 2017, and the scattering coefficient and the vertical height information were extracted from the atmospheric attenuation of the lower star to extract the sea fog sample points, and the spectral response curve based on MODIS was formed to analyse the spectral response characteristics of the sea fog, thus providing a theoretical basis for the monitoring of sea fog with optical remote sensing image.

Atmospheric correction over case 2 waters with an iterative fitting algorithm: relative humidity effects.

PubMed

Land, P E; Haigh, J D

1997-12-20

In algorithms for the atmospheric correction of visible and near-IR satellite observations of the Earth's surface, it is generally assumed that the spectral variation of aerosol optical depth is characterized by an Angström power law or similar dependence. In an iterative fitting algorithm for atmospheric correction of ocean color imagery over case 2 waters, this assumption leads to an inability to retrieve the aerosol type and to the attribution to aerosol spectral variations of spectral effects actually caused by the water contents. An improvement to this algorithm is described in which the spectral variation of optical depth is calculated as a function of aerosol type and relative humidity, and an attempt is made to retrieve the relative humidity in addition to aerosol type. The aerosol is treated as a mixture of aerosol components (e.g., soot), rather than of aerosol types (e.g., urban). We demonstrate the improvement over the previous method by using simulated case 1 and case 2 sea-viewing wide field-of-view sensor data, although the retrieval of relative humidity was not successful.

Association Between White Blood Cell Count Following Radiation Therapy With Radiation Pneumonitis in Non-Small Cell Lung Cancer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tang, Chad; Gomez, Daniel R.; Wang, Hongmei

Purpose: Radiation pneumonitis (RP) is an inflammatory response to radiation therapy (RT). We assessed the association between RP and white blood cell (WBC) count, an established metric of systemic inflammation, after RT for non-small cell lung cancer. Methods and Materials: We retrospectively analyzed 366 patients with non-small cell lung cancer who received ≥60 Gy as definitive therapy. The primary endpoint was whether WBC count after RT (defined as 2 weeks through 3 months after RT completion) was associated with grade ≥3 or grade ≥2 RP. Median lung volume receiving ≥20 Gy (V{sub 20}) was 31%, and post-RT WBC counts rangedmore » from 1.7 to 21.2 × 10{sup 3} WBCs/μL. Odds ratios (ORs) associating clinical variables and post-RT WBC counts with RP were calculated via logistic regression. A recursive-partitioning algorithm was used to define optimal post-RT WBC count cut points. Results: Post-RT WBC counts were significantly higher in patients with grade ≥3 RP than without (P<.05). Optimal cut points for post-RT WBC count were found to be 7.4 and 8.0 × 10{sup 3}/μL for grade ≥3 and ≥2 RP, respectively. Univariate analysis revealed significant associations between post-RT WBC count and grade ≥3 (n=46, OR=2.6, 95% confidence interval [CI] 1.4‒4.9, P=.003) and grade ≥2 RP (n=164, OR=2.0, 95% CI 1.2‒3.4, P=.01). This association held in a stepwise multivariate regression. Of note, V{sub 20} was found to be significantly associated with grade ≥2 RP (OR=2.2, 95% CI 1.2‒3.4, P=.01) and trended toward significance for grade ≥3 RP (OR=1.9, 95% CI 1.0-3.5, P=.06). Conclusions: Post-RT WBC counts were significantly and independently associated with RP and have potential utility as a diagnostic or predictive marker for this toxicity.« less

Updating the Vision for Marine Education.

ERIC Educational Resources Information Center

Klemm, E. Barbara

1988-01-01

Discusses the need to update the content, philosophical stance, and pedagogy of marine education to reflect recent advances in these areas. Cites some developments in oceanography and ocean engineering. Proposes ways teachers can learn about and utilize this knowledge. (RT)

Fast and Forceful: Modulation of Response Activation Induced by Shifts of Perceived Depth in Virtual 3D Space

PubMed Central

Plewan, Thorsten; Rinkenauer, Gerhard

2016-01-01

Reaction time (RT) can strongly be influenced by a number of stimulus properties. For instance, there was converging evidence that perceived size rather than physical (i.e., retinal) size constitutes a major determinant of RT. However, this view has recently been challenged since within a virtual three-dimensional (3D) environment retinal size modulation failed to influence RT. In order to further investigate this issue in the present experiments response force (RF) was recorded as a supplemental measure of response activation in simple reaction tasks. In two separate experiments participants’ task was to react as fast as possible to the occurrence of a target located close to the observer or farther away while the offset between target locations was increased from Experiment 1 to Experiment 2. At the same time perceived target size (by varying the retinal size across depth planes) and target type (sphere vs. soccer ball) were modulated. Both experiments revealed faster and more forceful reactions when targets were presented closer to the observers. Perceived size and target type barely affected RT and RF in Experiment 1 but differentially affected both variables in Experiment 2. Thus, the present findings emphasize the usefulness of RF as a supplement to conventional RT measurement. On a behavioral level the results confirm that (at least) within virtual 3D space perceived object size neither strongly influences RT nor RF. Rather the relative position within egocentric (body-centered) space presumably indicates an object’s behavioral relevance and consequently constitutes an important modulator of visual processing. PMID:28018273

Galileo's Earth-Moon portrait

NASA Astrophysics Data System (ADS)

Simarski, Lynn Teo

Research reported at an AGU session on Galileo's Earth/Moon flyby refined the spacecraft's distinctive portrait of the Earth-Moon system. The Galileo team presented dramatic new views of the Earth and Moon taken last December. Andrew P. Ingersoll showed a color movie of the rotating Earth, made through spectral filters with which Galileo viewed the Earth almost continuously for 25 hours.Galileo also made finely tuned observations of vegetation and clouds, using three very closely spaced spectral wavelengths in the near-infrared, explained W. Reid Thompson. In the resulting images, Argentinian grassland and Brazilian rain forest are clearly distinguished, demonstrating the applicability of this technique for routine monitoring of deforestation, shifts in vegetation due to climate, and other phenomena. Thompson suggested that this capability could be used on the Earth Observing System. One of the spectral bands may also have potential for monitoring cloud condensation, as it appears to differentiate actively condensing, vapor-heavy clouds from higher and drier clouds.

On-orbit Characterization of RVS for MODIS Thermal Emissive Bands

NASA Technical Reports Server (NTRS)

Xiong, X.; Salomonson, V.; Chiang, K.; Wu, A.; Guenther, B.; Barnes, W.

2004-01-01

Response versus scan angle (RVS) is a key calibration parameter for remote sensing radiometers that make observations using a scanning optical system, such as a scan mirror in MODIS and GLI or a rotating telescope in SeaWiFS and VIIRS, since the calibration is typically performed at a fixed viewing angle while the Earth scene observations are made over a range of viewing angles. Terra MODIS has been in operation for more than four years since its launch in December 1999. It has 36 spectral bands covering spectral range from visible (VIS) to long-wave infrared (LWIR). It is a cross-track scanning radiometer using a two-sided paddle wheel scan mirror, making observations over a wide field of view (FOV) of +/-55 deg from the instrument nadir. This paper describes on-orbit characterization of MODIS RVS for its thermal emissive bands (TEB), using the Earth view data collected during Terra spacecraft deep space maneuvers (DSM). Comparisons with pre-launch analysis and early on-orbit measurements are also provided.

A New High-Order Spectral Difference Method for Simulating Viscous Flows on Unstructured Grids with Mixed Elements

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Mao; Qiu, Zihua; Liang, Chunlei

In the present study, a new spectral difference (SD) method is developed for viscous flows on meshes with a mixture of triangular and quadrilateral elements. The standard SD method for triangular elements, which employs Lagrangian interpolating functions for fluxes, is not stable when the designed accuracy of spatial discretization is third-order or higher. Unlike the standard SD method, the method examined here uses vector interpolating functions in the Raviart-Thomas (RT) spaces to construct continuous flux functions on reference elements. Studies have been performed for 2D wave equation and Euler equa- tions. Our present results demonstrated that the SDRT method ismore » stable and high-order accurate for a number of test problems by using triangular-, quadrilateral-, and mixed- element meshes.« less

Vortex dynamics in superconducting transition edge sensors

NASA Astrophysics Data System (ADS)

Ezaki, S.; Maehata, K.; Iyomoto, N.; Asano, T.; Shinozaki, B.

2018-02-01

The temperature dependence of the electrical resistance (R-T) and the current-voltage (I-V) characteristics has been measured and analyzed in a 40 nm thick Ti thin film, which is used as a transition edge sensor (TES). The analyses of the I-V characteristics with the vortex-antivortex pair dissociation model indicate the possible existence of the Berezinskii-Kosterlitz-Thouless (BKT) transition in two-dimensional superconducting Ti thin films. We investigated the noise due to the vortices' flow in TESs. The values of the current noise spectral density in the TESs were estimated by employing the vortex dynamics caused by the BKT transition in the Ti thin films. The estimated values of the current noise spectral density induced by the vortices' flow were in respectable agreement with the values of excess noise experimentally observed in the TESs with Ti/Au bilayer.

[Study of red tide spectral characteristics and its mechanism].

PubMed

Cui, Ting-Wei; Zhang, Jie; Ma, Yi; Sun, Ling

2006-05-01

In situ spectral data of different red tide, whose dominant species are leptocylindrus danicus, chattonella marina, skeletonema costatum, and mesodinium rubrum, were acquired by above water method utilizing spectrometer manufactured by FieldSpec Dual VNIR (USA). It is emphasized that the characteristic reflectance peak lying between 687 and 728 nm can be used to distinguish between red tide and normal sea water. Also the spectral discrepancy between different dominant species of red tide is pointed out, which could be utilized to identify certain red tide species by remote sensing technique. Mechanisms of phytoplankton red tide spectra peaks and vales are given. Spectral characteristics of mesodinium rubrum, a kind of protozoan, may be related to its symbiotic alga in its body and phytoplankton pigment crumb. So, research on ingestion preference, symbiotic property with algae, and fluorescence emission character of such symbiotic algae under normal temperature may be helpful for the deep understanding of mechanism of mesodinium rubrum spectra.

Multi-spectral Line Scanner image of Northern California

NASA Image and Video Library

1973-06-22

S73-34295B (June 1973) --- A vertical view of a portion of northern California reproduced from data taken from the Skylab Multispectral Scanner, experiment S192, in the Skylab space station in Earth orbit. This view is the most westerly one-third of Frame No. 001, Roll No. 518, S192, Skylab 2. Frame No. 001 extends from the Pacific coast at the Eureka area southeasterly 175 nautical miles to the Feather River drainage basin. Included in this view are Lake Shasta, Sacramento River Valley, Redding and Red Bluff. This non-photographic image is a color composite of channels 2 (visible), 7, and 12 (infrared) from the Earth Resources Experiments Package (EREP) S192 scanner. The scanner techniques assist with spectral signature identification and mapping of ground truth targets in agriculture, forestry, geology, hydrology and oceanography. Photo credit: NASA

IN31A-1734 Development and Evaluation of a Gridded CrIS/ATMS Visualization for Operational Forecasting

NASA Technical Reports Server (NTRS)

Zavodsky, Bradley; Smith, Nadia; Dostalek, Jack; Stevens, Eric; Nelson, Kristine; Weisz, Elisabeth; Berndt, Emily; Line, Bill; Barnet, Chris; Gambacorta, Antonia;

On the Origin of Reverse Transcriptase-Using CRISPR-Cas Systems and Their Hyperdiverse, Enigmatic Spacer Repertoires.

PubMed

Silas, Sukrit; Makarova, Kira S; Shmakov, Sergey; Páez-Espino, David; Mohr, Georg; Liu, Yi; Davison, Michelle; Roux, Simon; Krishnamurthy, Siddharth R; Fu, Becky Xu Hua; Hansen, Loren L; Wang, David; Sullivan, Matthew B; Millard, Andrew; Clokie, Martha R; Bhaya, Devaki; Lambowitz, Alan M; Kyrpides, Nikos C; Koonin, Eugene V; Fire, Andrew Z

2017-07-11

Cas1 integrase is the key enzyme of the clustered regularly interspaced short palindromic repeat (CRISPR)-Cas adaptation module that mediates acquisition of spacers derived from foreign DNA by CRISPR arrays. In diverse bacteria, the cas1 gene is fused (or adjacent) to a gene encoding a reverse transcriptase (RT) related to group II intron RTs. An RT-Cas1 fusion protein has been recently shown to enable acquisition of CRISPR spacers from RNA. Phylogenetic analysis of the CRISPR-associated RTs demonstrates monophyly of the RT-Cas1 fusion, and coevolution of the RT and Cas1 domains. Nearly all such RTs are present within type III CRISPR-Cas loci, but their phylogeny does not parallel the CRISPR-Cas type classification, indicating that RT-Cas1 is an autonomous functional module that is disseminated by horizontal gene transfer and can function with diverse type III systems. To compare the sequence pools sampled by RT-Cas1-associated and RT-lacking CRISPR-Cas systems, we obtained samples of a commercially grown cyanobacterium- Arthrospira platensis Sequencing of the CRISPR arrays uncovered a highly diverse population of spacers. Spacer diversity was particularly striking for the RT-Cas1-containing type III-B system, where no saturation was evident even with millions of sequences analyzed. In contrast, analysis of the RT-lacking type III-D system yielded a highly diverse pool but reached a point where fewer novel spacers were recovered as sequencing depth was increased. Matches could be identified for a small fraction of the non-RT-Cas1-associated spacers, and for only a single RT-Cas1-associated spacer. Thus, the principal source(s) of the spacers, particularly the hypervariable spacer repertoire of the RT-associated arrays, remains unknown. IMPORTANCE While the majority of CRISPR-Cas immune systems adapt to foreign genetic elements by capturing segments of invasive DNA, some systems carry reverse transcriptases (RTs) that enable adaptation to RNA molecules. From analysis of available bacterial sequence data, we find evidence that RT-based RNA adaptation machinery has been able to join with CRISPR-Cas immune systems in many, diverse bacterial species. To investigate whether the abilities to adapt to DNA and RNA molecules are utilized for defense against distinct classes of invaders in nature, we sequenced CRISPR arrays from samples of commercial-scale open-air cultures of Arthrospira platensis , a cyanobacterium that contains both RT-lacking and RT-containing CRISPR-Cas systems. We uncovered a diverse pool of naturally occurring immune memories, with the RT-lacking locus acquiring a number of segments matching known viral or bacterial genes, while the RT-containing locus has acquired spacers from a distinct sequence pool for which the source remains enigmatic. Copyright © 2017 Silas et al.

Limb Viewing Hyper Spectral Imager (LiVHySI) for airglow measurements onboard YOUTHSAT-1

NASA Astrophysics Data System (ADS)

Bisht, R. S.; Hait, A. K.; Babu, P. N.; Sarkar, S. S.; Benerji, A.; Biswas, A.; Saji, A. K.; Samudraiah, D. R. M.; Kirankumar, A. S.; Pant, T. K.; Parimalarangan, T.

2014-08-01

The Limb Viewing Hyper Spectral Imager (LiVHySI) is one of the Indian payloads onboard YOUTHSAT (inclination 98.73°, apogee 817 km) launched in April, 2011. The Hyper-spectral imager has been operated in Earth’s limb viewing mode to measure airglow emissions in the spectral range 550-900 nm, from terrestrial upper atmosphere (i.e. 80 km altitude and above) with a line-of-sight range of about 3200 km. The altitude coverage is about 500 km with command selectable lowest altitude. This imaging spectrometer employs a Linearly Variable Filter (LVF) to generate the spectrum and an Active Pixel Sensor (APS) area array of 256 × 512 pixels, placed in close proximity of the LVF as detector. The spectral sampling is done at 1.06 nm interval. The optics used is an eight element f/2 telecentric lens system with 80 mm effective focal length. The detector is aligned with respect to the LVF such that its 512 pixel dimension covers the spectral range. The radiometric sensitivity of the imager is about 20 Rayleigh at noise floor through the signal integration for 10 s at wavelength 630 nm. The imager is being operated during the eclipsed portion of satellite orbits. The integration in the time/spatial domain could be chosen depending upon the season, solar and geomagnetic activity and/or specific target area. This paper primarily aims at describing LiVHySI, its in-orbit operations, quality, potential of the data and its first observations. The images reveal the thermospheric airglow at 630 nm to be the most prominent. These first LiVHySI observations carried out on the night of 21st April, 2011 are presented here, while the variability exhibited by the thermospheric nightglow at O(1D) 630 nm has been described in detail.

Slitless Solar Spectroscopy

NASA Technical Reports Server (NTRS)

Davila, Joseph M.; Jones, Sahela

2011-01-01

Spectrographs have traditionally suffered from the inability to obtain line intensities, widths, and Doppler shifts over large spatial regions of the Sun quickly because of the narrow instantaneous field of view. This has limited the spectroscopic analysis of rapidly varying solar features like, flares, CME eruptions, coronal jets, and reconnection regions. Imagers have provided high time resolution images of the full Sun with limited spectral resolution. In this paper we present recent advances in deconvolving spectrally dispersed images obtained through broad slits. We use this new theoretical formulation to examine the effectiveness of various potential observing scenarios, spatial and spectral resolutions, signal to noise ratio, and other instrument characteristics. This information will lay the foundation for a new generation of spectral imagers optimized for slitless spectral operation, while retaining the ability to obtain spectral information in transient solar events.

Applications of LANCE Data at SPoRT

NASA Technical Reports Server (NTRS)

Molthan, Andrew

2014-01-01

Short term Prediction Research and Transition (SPoRT) Center: Mission: Apply NASA and NOAA measurement systems and unique Earth science research to improve the accuracy of short term weather prediction at the regional/local scale. Goals: Evaluate and assess the utility of NASA and NOAA Earth science data and products and unique research capabilities to address operational weather forecast problems; Provide an environment which enables the development and testing of new capabilities to improve short term weather forecasts on a regional scale; Help ensure successful transition of new capabilities to operational weather entities for the benefit of society

Infrared upconversion for astronomical applications. [laser applications to astronomical spectroscopy of infrared spectra

NASA Technical Reports Server (NTRS)

Abbas, M. M.; Kostiuk, T.; Ogilvie, K. W.

1975-01-01

The performance of an upconversion system is examined for observation of astronomical sources in the low to middle infrared spectral range. Theoretical values for the performance parameters of an upconversion system for astronomical observations are evaluated in view of the conversion efficiencies, spectral resolution, field of view, minimum detectable source brightness and source flux. Experimental results of blackbody measurements and molecular absorption spectrum measurements using a lithium niobate upconverter with an argon-ion laser as the pump are presented. Estimates of the expected optimum sensitivity of an upconversion device which may be built with the presently available components are given.

Enhanced 630nm equatorial airglow emission observed by Limb Viewing Hyper Spectral Imager (LiVHySI) onboard YOUTHSAT-1

NASA Astrophysics Data System (ADS)

Bisht, R. S.; Thapa, N.; Babu, P. N.

2016-04-01

The Earth's airglow layer, when observed in the limb view mode, appears to be a double layer. LiVHySI onboard YOUTHSAT (inclination 98.730, apogee 817 km, launched by Indian Space Research Organization in April, 2011) is an Earth's limb viewing camera measuring airglow emissions in the spectral window of 550-900 nm. Total altitude coverage is about 500 km with command selectable lowest altitude. During few of the orbits we have observed the double layer structure and obtained absolute spectral intensity and altitude profile for 630 nm airglow emission. Our night time observations of upper atmosphere above dip equator carried out on 3rd May, 2011 show a prominent 630 nm double layer structure. The upper airglow layer consists of the 630 nm atomic oxygen O(1D) emission line and lower layer consists of OH(9-3) meinel band emission at 630 nm. The volume emission rate as a function of altitude is simulated for our observational epoch and the modeled limb intensity distribution is compared with the observations. The observations are in good agreement with the simulated intensity distribution.

Measurement of the Spatial Distribution of the Spectral Response Variation in the Field of View of the ASD Spectrometer Input Optics

DTIC Science & Technology

2014-12-01

development. It will be used for the measurement of the spectro-polarimetric BRDF (Bidirectional Reflectance Distribution function). For practical reasons...goniomètre est en développement. Il sera utilisé pour les mesures de BRDF (fonction de distribution de réflectance bidirectionnelle) spectrales et...by the independent measurements of the spectral and Bidirectional Reflectance Distribution Function ( BRDF ). The BRDF is the measurement of the

The Multi-Spectral Imaging Diagnostic on Alcator C-MOD and TCV

NASA Astrophysics Data System (ADS)

Linehan, B. L.; Mumgaard, R. T.; Duval, B. P.; Theiler, C. G.; TCV Team

2017-10-01

The Multi-Spectral Imaging (MSI) diagnostic is a new instrument that captures simultaneous spectrally filtered images from a common sight view while maintaining a large tendue and high spatial resolution. The system uses a polychromator layout where each image is sequentially filtered. This procedure yields a high transmission for each spectral channel with minimal vignetting and aberrations. A four-wavelength system was installed on Alcator C-Mod and then moved to TCV. The system uses industrial cameras to simultaneously image the divertor region at 95 frames per second at f/# 2.8 via a coherent fiber bundle (C-Mod) or a lens-based relay optic (TCV). The images are absolutely calibrated and spatially registered enabling accurate measurement of atomic line ratios and absolute line intensities. The images will be used to study divertor detachment by imaging impurities and Balmer series emissions. Furthermore, the large field of view and an ability to support many types of detectors opens the door for other novel approaches to optically measuring plasma with high temporal, spatial, and spectral resolution. Such measurements will allow for the study of Stark broadening and divertor turbulence. Here, we present the first measurements taken with this cavity imaging system. USDoE awards DE-FC02-99ER54512 and award DE-AC05-06OR23100, ORISE, administered by ORAU.

Airborne multidimensional integrated remote sensing system

NASA Astrophysics Data System (ADS)

Xu, Weiming; Wang, Jianyu; Shu, Rong; He, Zhiping; Ma, Yanhua

2006-12-01

In this paper, we present a kind of airborne multidimensional integrated remote sensing system that consists of an imaging spectrometer, a three-line scanner, a laser ranger, a position & orientation subsystem and a stabilizer PAV30. The imaging spectrometer is composed of two sets of identical push-broom high spectral imager with a field of view of 22°, which provides a field of view of 42°. The spectral range of the imaging spectrometer is from 420nm to 900nm, and its spectral resolution is 5nm. The three-line scanner is composed of two pieces of panchromatic CCD and a RGB CCD with 20° stereo angle and 10cm GSD(Ground Sample Distance) with 1000m flying height. The laser ranger can provide height data of three points every other four scanning lines of the spectral imager and those three points are calibrated to match the corresponding pixels of the spectral imager. The post-processing attitude accuracy of POS/AV 510 used as the position & orientation subsystem, which is the aerial special exterior parameters measuring product of Canadian Applanix Corporation, is 0.005° combined with base station data. The airborne multidimensional integrated remote sensing system was implemented successfully, performed the first flying experiment on April, 2005, and obtained satisfying data.

Spectrally resolved, broadband frequency response characterization of photodetectors using continuous-wave supercontinuum sources

NASA Astrophysics Data System (ADS)

Choudhury, Vishal; Prakash, Roopa; Nagarjun, K. P.; Supradeepa, V. R.

2018-02-01

A simple and powerful method using continuous wave supercontinuum lasers is demonstrated to perform spectrally resolved, broadband frequency response characterization of photodetectors in the NIR Band. In contrast to existing techniques, this method allows for a simple system to achieve the goal, requiring just a standard continuous wave(CW) high-power fiber laser source and an RF spectrum analyzer. From our recent work, we summarize methods to easily convert any high-power fiber laser into a CW supercontinuum. These sources in the time domain exhibit interesting properties all the way down to the femtosecond time scale. This enables measurement of broadband frequency response of photodetectors while the wide optical spectrum of the supercontinuum can be spectrally filtered to obtain this information in a spectrally resolved fashion. The method involves looking at the RF spectrum of the output of a photodetector under test when incident with the supercontinuum. By using prior knowledge of the RF spectrum of the source, the frequency response can be calculated. We utilize two techniques for calibration of the source spectrum, one using a prior measurement and the other relying on a fitted model. Here, we characterize multiple photodetectors from 150MHz bandwidth to >20GHz bandwidth at multiple bands in the NIR region. We utilize a supercontinuum source spanning over 700nm bandwidth from 1300nm to 2000nm. For spectrally resolved measurement, we utilize multiple wavelength bands such as around 1400nm and 1600nm. Interesting behavior was observed in the frequency response of the photodetectors when comparing broadband spectral excitation versus narrower band excitation.

A comparison of transfer-appropriate processing and multi-process frameworks for prospective memory performance.

PubMed

McBride, Dawn M; Abney, Drew H

2012-01-01

We examined multi-process (MP) and transfer-appropriate processing descriptions of prospective memory (PM). Three conditions were compared that varied the overlap in processing type (perceptual/conceptual) between the ongoing and PM tasks such that two conditions involved a match of perceptual processing and one condition involved a mismatch in processing (conceptual ongoing task/perceptual PM task). One of the matched processing conditions also created a focal PM task, whereas the other two conditions were considered non-focal (Einstein & McDaniel, 2005). PM task accuracy and ongoing task completion speed in baseline and PM task conditions were measured. Accuracy results indicated a higher PM task completion rate for the focal condition than the non-focal conditions, a finding that is consistent with predictions made by the MP view. However, reaction time (RT) analyses indicated that PM task cost did not differ across conditions when practice effects are considered. Thus, the PM accuracy results are consistent with a MP description of PM, but RT results did not support the MP view predictions regarding PM cost.

Riedel's thyroiditis association with IgG4-related disease.

PubMed

Stan, Marius N; Sonawane, Vikram; Sebo, Thomas J; Thapa, Prabin; Bahn, Rebecca S

2017-03-01

IgG4-positive (+) plasma cells have been reported in both Riedel's thyroiditis (RT) and Hashimoto's thyroiditis (HT). These cells are the hallmark of IgG4-related disease (IgG4-RD). We sought to determine whether RT is part of IgG4-RD spectrum. This was a case-control study performed at a tertiary medical centre. We included RT cases from the period 1958 to 2008 that had sufficient paraffin-embedded tissue for IgG4 immunostaining. Controls were patients with HT, age and gender matched, with similar pathology criteria. The main outcome measures were the intensity of the IgG4 staining and the clinical and histological correlates with IgG4-RD. Six pairs of RT and HT were analysed. The mean age was 44·7 years. In both groups, 5/6 cases had positive IgG4 staining. The mean number of IgG4 + cells/ HPF, normalized to the degree of inflammation, was 3·2 ± 3·0 SD (RT) vs 0·9 ± 0·7 (HT), P = 0·15, for fibrotic areas and 2·1 ± 2·3 SD vs 1·0 ± 0·8 (P = 0·39) for areas with lymphoid aggregates. We found the number of IgG4 +  cells in RT to be inversely correlated with the duration of disease (P = 0·046). Three RT cases had associated comorbidities from the IgG4-RD spectrum while none of the HT cases had such conditions. Riedel's thyroiditis is a component of IgG4-RD with the density of the IgG4 +  lymphocytic infiltrate being time dependent. In this small study, we did not identify differences in IgG4 infiltration between RT and HT, minimizing the utility of this marker in RT diagnosis. © 2016 John Wiley & Sons Ltd.

Evaluation of the utilization of external radiotherapy in the treatment of localized prostate cancer in Andalusia, Spain.

PubMed

Expósito, José; Linares, Isabel; Castillo, Isabel; Martínez, Miguel; Vargas, Pilar; Herruzo, Ismael; Medina, José Antonio; Palacios, Amalia; Bayo, Eloísa; Peracaula, Francisco; Jaén, Javier; Sánchez, José Antonio; Ortiz, María José

2015-12-30

Around 27,000 new cases of prostate cancer are diagnosed every year in Spain and 5400 die from this disease. Radiotherapy (RT), alone or combined, has proven to be effective as initial treatment in patients with localized disease. Our objective was to evaluate the use of external beam RT (EBRT) in our region, comparing the indication rate and irradiation rate and examining variability in its application among hospitals. We conducted a review of RT guidelines and indication studies for prostate cancer (% expected irradiation). Data were gathered from all twelve public healthcare centers in Andalusia (Spain) on RT-treated prostate cancer patients during 2013 (% actual irradiation) and from nine of the centers on RT discharge reports. Information was classified according to type of hospital, tumor risk category and RT treatment (technique, dosage, volume, toxicity). The estimated RT rate was 67 % (1289/1917), 43 % were aged > 70 years, 44.7 % had ECOG performance status of 0); 44.7 % had high-risk tumors; 57 % underwent RT associated with hormone therapy; 70 % of patients receiving RT were treated with 3D planning (30 % IGRT); and doses were 70-76 Gy in 70 % of cases and >76 Gy in 10.7 %. Acute gastrointestinal and genitourinary toxicities were < grade 2 in 79 and 89 % of patients, respectively. An irradiation rate significantly below the mean for the study was found in four provinces. There was a significant difference among provinces in the distribution of risk groups. Underutilization of EBRT was estimated to be around 30 % in prostate cancer patients, with an elevated variability in irradiation rates among hospitals related to differences in available technology and in the distribution of patients with different risk levels. These data should be a matter of concern to regional health managers, given the negative and measurable impact on the survival of patients.

Economic consequence of local control with radiotherapy: Cost analysis of internal mammary and medial supraclavicular lymph node radiotherapy in breast cancer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lievens, Yolande; Kesteloot, Katrien; Bogaert, Walter van den

2005-11-15

Purpose: To investigate the financial implications of radiotherapy (RT) to the internal mammary and medial supraclavicular lymph node chain (IM-MS) in postoperative breast cancer. Methods and Materials: A cost-effectiveness and cost-utility analysis were performed, using Markov models, comparing the early and delayed costs and effects of IM-MS during a 20-year time span from a societal viewpoint. The outcome estimates were based on Level I evidence from postoperative RT literature and the cost estimates on the standard practice of the Leuven University Hospitals, with the RT costs derived from an activity-based costing program developed in the department. Results: On the basismore » of the assumptions of the model and seen during a 20-year time span, primary treatment including IM-MS RT results in a cost savings (approximately EURO 10,000) compared with a strategy without RT. Because IM-MS RT also results in better clinical effectiveness and greater quality of life, the treatment with IM-MS dominates the approach without IM-MS. Sensitivity analyses confirmed the robustness of these results in all tested circumstances. Although threshold values were found for the cost of IM-MS, the cost at relapse, and the quality of life after treatment, these were substantially different from the baseline estimates, indicating that it is very unlikely that omitting IM-MS would become superior. Conclusion: This ex-ante cost evaluation of IM-MS RT showed that the upfront costs of locoregional RT are easily compensated for by avoiding the costs of treating locoregional and distant relapse at a later stage. The cost-sparing effect of RT should, however, be evaluated for a sufficiently long time span and is most specifically found in tumors with a rather slow natural history and a multitude of available systemic treatments at relapse, such as breast cancer.« less

Overview of Sentinel-2

NASA Astrophysics Data System (ADS)

Fernandez, Valerie; Martimort, Philippe; Spoto, Francois; Sy, Omar; Laberinti, Paolo

2013-10-01

GMES is a joint initiative of the European Commission (EC) and the European Space Agency (ESA), designed to establish a European capacity for the provision and use of operational monitoring information for environment and security applications. ESA's role in GMES is to provide the definition and the development of the space- and ground-related system elements. GMES Sentinel-2 mission provides continuity to services relying on multi-spectral highresolution optical observations over global terrestrial surfaces. The key mission objectives for Sentinel-2 are: (1) to provide systematic global acquisitions of high-resolution multi-spectral imagery with a high revisit frequency, (2) to provide enhanced continuity of multi-spectral imagery provided by the SPOT series of satellites, and (3) to provide observations for the next generation of operational products such as landcover maps, land change detection maps, and geophysical variables. Consequently, Sentinel-2 will directly contribute to the Land Monitoring, Emergency Response, and Security services. The corresponding user requirements have driven the design towards a dependable multi-spectral Earthobservation system featuring the MSI with 13 spectral bands spanning from the visible and the near infrared to the short wave infrared. The spatial resolution varies from 10 m to 60 m depending on the spectral band with a 290 km field of view. This unique combination of high spatial resolution, wide field of view and large spectral coverage will represent a major step forward compared to current multi-spectral missions. The mission foresees a series of satellites, each having a 7.25-year lifetime (extendable to 12 years) over a 20-year period starting with the launch of Sentinel-2A foreseen by mid-2014. During full operations two identical satellites will be maintained in the same sun synchronous orbit with a phase delay of 180° providing a revisit time of five days at the equator.

Adjuvant radiation therapy for pancreatic cancer: a review of the old and the new.

PubMed

Boyle, John; Czito, Brian; Willett, Christopher; Palta, Manisha

2015-08-01

Surgery represents the only potential curative treatment option for patients diagnosed with pancreatic adenocarcinoma. Despite aggressive surgical management for patients deemed to be resectable, rates of local recurrence and/or distant metastases remain high, resulting in poor long-term outcomes. In an effort to reduce recurrence rates and improve survival for patients having undergone resection, adjuvant therapies (ATs) including chemotherapy and chemoradiation therapy (CRT) have been explored. While adjuvant chemotherapy has been shown to consistently improve outcomes, the data regarding adjuvant radiation therapy (RT) is mixed. Although the ability of radiation to improve local control has been demonstrated, it has not always led to improved survival outcomes for patients. Early trials are flawed in their utilization of sub-optimal radiation techniques, limiting their generalizability. Recent and ongoing trials incorporate more optimized RT approaches and seek to clarify its role in treatment strategies. At the same time novel radiation techniques such as intensity modulated RT (IMRT) and stereotactic body RT (SBRT) are under active investigation. It is hoped that these efforts will lead to improved disease-related outcomes while reducing toxicity rates.

Adjuvant radiation therapy for pancreatic cancer: a review of the old and the new

PubMed Central

Boyle, John; Czito, Brian; Willett, Christopher

2015-01-01

Surgery represents the only potential curative treatment option for patients diagnosed with pancreatic adenocarcinoma. Despite aggressive surgical management for patients deemed to be resectable, rates of local recurrence and/or distant metastases remain high, resulting in poor long-term outcomes. In an effort to reduce recurrence rates and improve survival for patients having undergone resection, adjuvant therapies (ATs) including chemotherapy and chemoradiation therapy (CRT) have been explored. While adjuvant chemotherapy has been shown to consistently improve outcomes, the data regarding adjuvant radiation therapy (RT) is mixed. Although the ability of radiation to improve local control has been demonstrated, it has not always led to improved survival outcomes for patients. Early trials are flawed in their utilization of sub-optimal radiation techniques, limiting their generalizability. Recent and ongoing trials incorporate more optimized RT approaches and seek to clarify its role in treatment strategies. At the same time novel radiation techniques such as intensity modulated RT (IMRT) and stereotactic body RT (SBRT) are under active investigation. It is hoped that these efforts will lead to improved disease-related outcomes while reducing toxicity rates. PMID:26261730

Reverse transcriptase polymerase chain reaction on fine needle aspirates for rapid detection of translocations in synovial sarcoma.

PubMed

Nilsson, G; Wang, M; Wejde, J; Kanter, L; Karlén, J; Tani, E; Kreicbergs, A; Larsson, O

1998-01-01

To evaluate the utilization of fine needle aspiration (FNA) biopsy to obtain material for reverse-transcriptase polymerase chain reaction (RT-PCR) in the detection of the t(X;18)(p11.2;q11.2) translocation in synovial sarcomas. We applied RT-PCR to detection of synovial sarcoma fusion gene transcripts on fine needle aspirates. Five clinical samples were first analyzed: one was a tumor previously diagnosed as malignant hemangiopericytoma, one was a poorly defined tumor, and three were suspected synovial sarcomas. FNA material was transferred directly to the RT-PCR reaction tube without RNA extraction. The t(X;18) translocation could be detected on the limited amount of material that FNA provides. In each of the cases studied the representivity of the tumor samples was confirmed microscopically. Our protocol permits analysis directly on representative samples without extraction of RNA. The results imply that RT-PCR offers reliable detection of sarcoma fusion gene transcripts on fine needle aspirates. The procedure, apart from being applicable to outpatients, is rapid and sensitive.

Isolation and whole genome sequencing of a Ruminococcus-like bacterium, associated with irritable bowel syndrome.

PubMed

Hynönen, Ulla; Rasinkangas, Pia; Satokari, Reetta; Paulin, Lars; de Vos, Willem M; Pietilä, Taija E; Kant, Ravi; Palva, Airi

2016-06-01

In our previous studies on the intestinal microbiota in irritable bowel syndrome (IBS), we identified a bacterial phylotype with higher abundance in patients suffering from diarrhea than in healthy controls. In the present work, we have isolated in pure culture strain RT94, belonging to this phylotype, determined its whole genome sequence and performed an extensive genomic analysis and phenotypical testing. This revealed strain RT94 to be a strict anaerobe apparently belonging to a novel species with only 94% similarity in the 16S rRNA gene sequence to the closest relatives Ruminococcus torques and Ruminococcus lactaris. The G + C content of strain RT94 is 45.2 mol% and the major long-chain cellular fatty acids are C16:0, C18:0 and C14:0. The isolate is metabolically versatile but not a mucus or cellulose utilizer. It produces acetate, ethanol, succinate, lactate and formate, but very little butyrate, as end products of glucose metabolism. The mechanisms underlying the association of strain RT94 with diarrhea-type IBS are discussed. Copyright © 2016 Elsevier Ltd. All rights reserved.

Imaging of laboratory magnetospheric plasmas using coherence imaging technique

NASA Astrophysics Data System (ADS)

Nishiura, Masaki; Takahashi, Noriki; Yoshida, Zensho; Nakamura, Kaori; Kawazura, Yohei; Kenmochi, Naoki; Nakatsuka, Masataka; Sugata, Tetsuya; Katsura, Shotaro; Howard, John

2017-10-01

The ring trap 1 (RT-1) device creates a laboratory magnetosphere for the studies on plasma physics and advanced nuclear fusion. A levitated superconducting coil produces magnetic dipole fields that realize a high beta plasma confinement that is motivated by self-organized plasmas in planetary magnetospheres. The electron cyclotron resonance heating (ECRH) with 8.2 GHz and 50 kW produces the plasmas with hot electrons in a few ten keV range. The electrons contribute to the local electron beta that exceeded 1 in RT-1. For the ion heating, ion cyclotron range of frequencies (ICRF) heating with 2-4 MHz and 10 kW has been performed in RT-1. The radial profile of ion temperature by a spectroscopic measurement indicates the signature of ion heating. In the holistic point of view, a coherence imaging system has been implemented for imaging the entire ion dynamics in the laboratory magnetosphere. The diagnostic system and obtained results will be presented.

Head movement compensation in real-time magnetoencephalographic recordings.

PubMed

Little, Graham; Boe, Shaun; Bardouille, Timothy

2014-01-01

Neurofeedback- and brain-computer interface (BCI)-based interventions can be implemented using real-time analysis of magnetoencephalographic (MEG) recordings. Head movement during MEG recordings, however, can lead to inaccurate estimates of brain activity, reducing the efficacy of the intervention. Most real-time applications in MEG have utilized analyses that do not correct for head movement. Effective means of correcting for head movement are needed to optimize the use of MEG in such applications. Here we provide preliminary validation of a novel analysis technique, real-time source estimation (rtSE), that measures head movement and generates corrected current source time course estimates in real-time. rtSE was applied while recording a calibrated phantom to determine phantom position localization accuracy and source amplitude estimation accuracy under stationary and moving conditions. Results were compared to off-line analysis methods to assess validity of the rtSE technique. The rtSE method allowed for accurate estimation of current source activity at the source-level in real-time, and accounted for movement of the source due to changes in phantom position. The rtSE technique requires modifications and specialized analysis of the following MEG work flow steps.•Data acquisition•Head position estimation•Source localization•Real-time source estimation This work explains the technical details and validates each of these steps.

Radiotherapy before and after radical prostatectomy for high-risk and locally advanced prostate cancer.

PubMed

Perez, Bradford A; Koontz, Bridget F

2015-05-01

Men with localized high-risk prostate cancer carry significant risk of prostate cancer-specific mortality. The best treatment approach to minimize this risk is unclear. In this review, we evaluate the role of radiation before and after radical prostatectomy. A critical review of the literature was performed regarding the application of external radiation therapy (RT) in combination with prostatectomy for high-risk localized prostate cancer. Up to 70% of men with high-risk localized disease may require adjuvant therapy because of adverse pathologic features or biochemical recurrence in the absence of systemic disease. The utility of adjuvant RT among men with adverse pathologic features are well established at least regarding minimizing biochemical recurrence risk. The optimal timing of salvage radiation is the subject of ongoing studies. Neoadjuvant RT requires further study but is a potentially attractive method because of decreased radiation field sizes and potential radiobiologic benefits of delivering RT before surgery. Salvage prostatectomy is effective at treating local recurrence after radiation but is associated with significant surgical morbidity. Combining local therapies including radical prostatectomy and RT can be a reasonable approach. Care should be taken at the initial presentation of high-risk localized prostate cancer to consider and plan for the likelihood of multimodality care. Copyright © 2015 Elsevier Inc. All rights reserved.

Effects of WDRC release time and number of channels on output SNR and speech recognition

PubMed Central

Alexander, Joshua M.; Masterson, Katie

2014-01-01

Objectives The purpose of this study was to investigate the joint effects that wide dynamic range compression (WDRC) release time (RT) and number of channels have on recognition of sentences in the presence of steady and modulated maskers at different signal-to-noise ratios (SNRs). How the different combinations of WDRC parameters affect output SNR and the role this plays in the observed findings was also investigated. Design Twenty-four listeners with mild to moderate sensorineural hearing loss identified sentences mixed with steady or modulated maskers at 3 SNRs (−5, 0, +5 dB) that had been processed using a hearing aid simulator with 6 combinations of RT (40 and 640 ms) and number of channels (4, 8, and 16). Compression parameters were set using the Desired Sensation Level v5.0a prescriptive fitting method. For each condition, amplified speech and masker levels and the resultant long-term output SNR were measured. Results Speech recognition with WDRC depended on the combination of RT and number of channels, with the greatest effects observed at 0 dB input SNR, in which mean speech recognition scores varied by 10–12% across WDRC manipulations. Overall, effect sizes were generally small. Across both masker types and the three SNRs tested, the best speech recognition was obtained with 8 channels, regardless of RT. Increased speech levels, which favor audibility, were associated with the short RT and with an increase in the number of channels. These same conditions also increased masker levels by an even greater amount, for a net decrease in the long-term output SNR. Changes in long-term SNR across WDRC conditions were found to be strongly associated with changes in the temporal envelope shape as quantified by the Envelope Difference Index, however, neither of these factors fully explained the observed differences in speech recognition. Conclusions A primary finding of this study was that the number of channels had a modest effect when analyzed at each level of RT, with results suggesting that selecting 8 channels for a given RT might be the safest choice. Effects were smaller for RT, with results suggesting that short RT was slightly better when only 4 channels were used and that long RT was better when 16 channels were used. Individual differences in how listeners were influenced by audibility, output SNR, temporal distortion, and spectral distortion may have contributed to the size of the effects found in this study. Because only general suppositions could made for how each of these factors may have influenced the overall results of this study, future research would benefit from exploring the predictive value of these and other factors in selecting the processing parameters that maximize speech recognition for individuals. PMID:25470368

Retrieval of spectral aerosol optical thickness over land using ocean color sensors MERIS and SeaWiFS

NASA Astrophysics Data System (ADS)

von Hoyningen-Huene, W.; Yoon, J.; Vountas, M.; Istomina, L. G.; Rohen, G.; Dinter, T.; Kokhanovsky, A. A.; Burrows, J. P.

2010-05-01

For the determination of aerosol optical thickness (AOT) Bremen AErosol Retrieval (BAER) has been developed. Method and main influences on the aerosol retrieval are described together with validation and results. The retrieval separates the spectral aerosol reflectance from surface and Rayleigh path reflectance for the shortwave range of the measured spectrum of top-of-atmosphere reflectance less than 0.670 μm. The advantage of MERIS (Medium Resolution Imaging Spectrometer on ENVISAT) and SeaWiFS (Sea viewing Wide Fiels Sensor on OrbView-2) observations are the existence of several spectral channels in the blue and visible range enabling the spectral determination of AOT in 7 (or 6) channels (0.412-0.670 μm) and additionally channels in the NIR, which can be used to characterize the surface properties. A dynamical spectral surface reflectance model for different surface types is used to obtain the spectral surface reflectance for this separation. Normalized differential vegetation index (NDVI), taken from the satellite observations, is the model input. Further surface BRDF is considered by the Raman-Pinty-Verstraete (RPV) model. Spectral AOT is obtained from aerosol reflectance using look-up-tables, obtained from radiative transfer calculations with given aerosol phase functions and single scattering albedos either from aerosol models, given by OPAC or from experimental campaigns. Validations of the obtained AOT retrieval results with AERONET data over Europe gave a preference for experimental phase functions derived from almucantar measurements. Finally long-term observations of SeaWiFS have been investigated for trends in AOT.

Highly Sensitive Assay for Detection of Enterovirus in Clinical Specimens by Reverse Transcription-PCR with an Armored RNA Internal Control

PubMed Central

Beld, Marcel; Minnaar, René; Weel, Jan; Sol, Cees; Damen, Marjolein; van der Avoort, Harry; Wertheim-van Dillen, Pauline; Breda, Alex van; Boom, René

2004-01-01

The objective of the present study was the development of a diagnostic reverse transcription (RT)-PCR for the specific detection of enterovirus (EV) RNA in clinical specimens controlled by an internal control (IC) RNA. The IC RNA contains the same primer binding sites as EV RNA but has a different probe region. The IC RNA was packaged into an MS2 phage core particle (armored) and was added to the clinical sample to allow monitoring of both extraction efficiency and RT-PCR efficiency. Serial dilutions of the IC RNA were made, and the detection limit of the RT-PCR was tested in a background of EV RNA-negative cerebrospinal fluid. The sensitivity and specificity of the RT-PCR assay were tested by using all 64 known EV serotypes, several non-EV serotypes, and two Quality Control for Molecular Diagnostics (QCMD) Program EV proficiency panels from 2001 and 2002. In total, 322 clinical specimens were tested by RT-PCR, and to establish the clinical utility of the RT-PCR, a comparison of the results of viral culture and RT-PCR was done with 87 clinical specimens. The lower limit of sensitivity was reached at about 150 copies of IC RNA/ml. All 64 EV serotypes were positive, while all non-EV serotypes were negative. All culture-positive samples of the 2001 QCMD proficiency panel (according to the 50% tissue culture infective doses per milliliter) were positive by RT-PCR. Invalid results, i.e., negativity for both EV RNA and IC RNA, due to inhibition of RT-PCR were observed for 33.3% of the members of the 2002 QCMD proficiency panel and 3.1% of the clinical specimens. Inhibition of RT-PCR could be relieved by the addition of 400 ng of bovine α-casein per μl to both the RT reaction mixture and the PCR mixture. With this optimized protocol, the results for all samples of the 2002 QCMD proficiency panel and all clinical specimens except one fecal sample (0.3%) were valid. Evaluation of the clinical samples demonstrated that EV infection could be detected in 12 of 87 samples (13.8%) by RT-PCR, while viral culture was negative. Our data show that the RT-PCR with armored IC RNA offers a very reliable and rapid diagnostic tool for the detection of EV in clinical specimens and that the addition of bovine α-casein relieved inhibition of the RT-PCR for 99.7% of clinical specimens. PMID:15243060

Automated test-site radiometer for vicarious calibration

NASA Astrophysics Data System (ADS)

Li, Xin; Yin, Ya-peng; Liu, En-chao; Zhang, Yan-na; Xun, Li-na; Wei, Wei; Zhang, Zhi-peng; Qiu, Gang-gang; Zhang, Quan; Zheng, Xiao-bing

2014-11-01

In order to realize unmanned vicarious calibration, Automated Test-site Radiometer (ATR) was developed for surface reflectance measurements. ATR samples the spectrum from 400nm-1600 nm with 8 interference filters coupled with silicon and InGaAs detectors. The field of view each channel is 10 ° with parallel optical axis. One SWIR channel lies in the center and the other seven VNIR channels are on the circle of 4.8cm diameters which guarantee each channel to view nearly the same section of ground. The optical head as a whole is temperature controlled utilizing a TE cooler for greater stability and lower noise. ATR is powered by a solar panel and transmit its data through a BDS (China's BeiDou Navigation Satellite System) terminator for long-term measurements without personnel in site. ATR deployed in Dunhuang test site with ground field about 30-cm-diameter area for multi-spectral reflectance measurements. Other instruments at the site include a Cimel sunphotometer and a diffuser-to-globe irradiance meter for atmosphere observations. The methodology for band-averaged reflectance retrieval and hyperspectral reflectance fitting process are described. Then the hyperspectral reflectance and atmospheric parameters are put into 6s code to predict TOA radiance which compare with MODIS radiance.

Passive unmanned sky spectroscopy for remote bird classification

NASA Astrophysics Data System (ADS)

Lundin, Patrik; Brydegaard, Mikkel; Cocola, Lorenzo; Runemark, Anna; Åkesson, Susanne; Svanberg, Sune

2011-11-01

We present a method based on passive spectroscopy with aim to remotely study flying birds. A compact spectrometer is continuously recording spectra of a small section of the sky, waiting for birds to obscure part of the field-of-view when they pass the field in flight. In such situations the total light intensity received through the telescope, looking straight up, will change very rapidly as compared to the otherwise slowly varying sky light. On passage of a bird, both the total intensity and the spectral shape of the captured light changes notably. A camera aimed in the same direction as the telescope, although with a wider field-of-view, is triggered by the sudden intensity changes in the spectrometer to record additional information, which may be used for studies of migration and orientation. Example results from a trial are presented and discussed. The study is meant to explore the information that could be gathered and extracted with the help of a spectrometer connected to a telescope. Information regarding the color, size and height of flying birds is discussed. Specifically, an application for passive distance determination utilizing the atmospheric oxygen A-band absorption at around 760 nm is discussed.

Atomic vapor laser isotope separation process

DOEpatents

Wyeth, R.W.; Paisner, J.A.; Story, T.

1990-08-21

A laser spectroscopy system is utilized in an atomic vapor laser isotope separation process. The system determines spectral components of an atomic vapor utilizing a laser heterodyne technique. 23 figs.

Development of a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) system for a highly sensitive detection of enterovirus in the stool samples of acute flaccid paralysis cases

PubMed Central

2009-01-01

Background In the global eradication program for poliomyelitis, the laboratory diagnosis plays a critical role by isolating poliovirus (PV) from the stool samples of acute flaccid paralysis (AFP) cases. In this study, we developed a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) system for a rapid and highly sensitive detection of enterovirus including PV to identify stool samples positive for enterovirus including PV. Methods A primer set was designed for RT-LAMP to detect enterovirus preferably those with PV-like 5'NTRs of the viral genome. The sensitivity of RT-LAMP system was evaluated with prototype strains of enterovirus. Detection of enterovirus from stool extracts was examined by using RT-LAMP system. Results We detected at least 400 copies of the viral genomes of PV(Sabin) strains within 90 min by RT-LAMP with the primer set. This RT-LAMP system showed a preference for Human enterovirus species C (HEV-C) strains including PV, but exhibited less sensitivity to the prototype strains of HEV-A and HEV-B (detection limits of 7,400 to 28,000 copies). Stool extracts, from which PV, HEV-C, or HEV-A was isolated in the cell culture system, were mostly positive by RT-LAMP method (positive rates of 15/16 (= 94%), 13/14 (= 93%), and 4/4 (= 100%), respectively). The positive rate of this RT-LAMP system for stool extracts from which HEV-B was isolated was lower than that of HEV-C (positive rate of 11/21 (= 52%)). In the stool samples, which were negative for enterovirus isolation by the cell culture system, we found that two samples were positive for RT-LAMP (positive rates of 2/38 (= 5.3%)). In these samples, enterovirus 96 was identified by sequence analysis utilizing a seminested PCR system. Conclusions RT-LAMP system developed in this study showed a high sensitivity comparable to that of the cell culture system for the detection of PV, HEV-A, and HEV-C, but less sensitivity to HEV-B. This RT-LAMP system would be useful for the direct detection of enterovirus from the stool extracts. PMID:20015403

Application of modern radiative transfer tools to model laboratory quartz emissivity

NASA Astrophysics Data System (ADS)

Pitman, Karly M.; Wolff, Michael J.; Clayton, Geoffrey C.

2005-08-01

Planetary remote sensing of regolith surfaces requires use of theoretical models for interpretation of constituent grain physical properties. In this work, we review and critically evaluate past efforts to strengthen numerical radiative transfer (RT) models with comparison to a trusted set of nadir incidence laboratory quartz emissivity spectra. By first establishing a baseline statistical metric to rate successful model-laboratory emissivity spectral fits, we assess the efficacy of hybrid computational solutions (Mie theory + numerically exact RT algorithm) to calculate theoretical emissivity values for micron-sized α-quartz particles in the thermal infrared (2000-200 cm-1) wave number range. We show that Mie theory, a widely used but poor approximation to irregular grain shape, fails to produce the single scattering albedo and asymmetry parameter needed to arrive at the desired laboratory emissivity values. Through simple numerical experiments, we show that corrections to single scattering albedo and asymmetry parameter values generated via Mie theory become more necessary with increasing grain size. We directly compare the performance of diffraction subtraction and static structure factor corrections to the single scattering albedo, asymmetry parameter, and emissivity for dense packing of grains. Through these sensitivity studies, we provide evidence that, assuming RT methods work well given sufficiently well-quantified inputs, assumptions about the scatterer itself constitute the most crucial aspect of modeling emissivity values.

Universal dispersion model for characterization of optical thin films over wide spectral range: Application to magnesium fluoride

NASA Astrophysics Data System (ADS)

Franta, Daniel; Nečas, David; Giglia, Angelo; Franta, Pavel; Ohlídal, Ivan

2017-11-01

Optical characterization of magnesium fluoride thin films is performed in a wide spectral range from far infrared to extreme ultraviolet (0.01-45 eV) utilizing the universal dispersion model. Two film defects, i.e. random roughness of the upper boundaries and defect transition layer at lower boundary are taken into account. An extension of universal dispersion model consisting in expressing the excitonic contributions as linear combinations of Gaussian and truncated Lorentzian terms is introduced. The spectral dependencies of the optical constants are presented in a graphical form and by the complete set of dispersion parameters that allows generating tabulated optical constants with required range and step using a simple utility in the newAD2 software package.

Optimal Location of Radiation Therapy Centers With Respect to Geographic Access

DOE Office of Scientific and Technical Information (OSTI.GOV)

Santibáñez, Pablo; Gaudet, Marc; French, John

2014-07-15

Purpose: To develop a framework with which to evaluate locations of radiation therapy (RT) centers in a region based on geographic access. Methods and Materials: Patient records were obtained for all external beam radiation therapy started in 2011 for the province of British Columbia, Canada. Two metrics of geographic access were defined. The primary analysis was percentage of patients (coverage) within a 90-minute drive from an RT center (C90), and the secondary analysis was the average drive time (ADT) to an RT center. An integer programming model was developed to determine optimal center locations, catchment areas, and capacity required undermore » different scenarios. Results: Records consisted of 11,096 courses of radiation corresponding to 161,616 fractions. Baseline geographic access was estimated at 102.5 minutes ADT (each way, per fraction) and 75.9% C90. Adding 2 and 3 new centers increased C90 to 88% and 92%, respectively, and decreased ADT by between 43% and 61%, respectively. A scenario in which RT was provided in every potential location that could support at least 1 fully utilized linear accelerator resulted in 35.3 minutes' ADT and 93.6% C90. Conclusions: The proposed framework and model provide a data-driven means to quantitatively evaluate alternative configurations of a regional RT system. Results suggest that the choice of location for future centers can significantly improve geographic access to RT.« less

Direct sequencing of hepatitis A virus and norovirus RT-PCR products from environmentally contaminated oyster using M13-tailed primers.

PubMed

Williams-Woods, Jacquelina; González-Escalona, Narjol; Burkhardt, William

2011-12-01

Human norovirus (HuNoV) and hepatitis A (HAV) are recognized as leading causes of non-bacterial foodborne associated illnesses in the United States. DNA sequencing is generally considered the standard for accurate viral genotyping in support of epidemiological investigations. Due to the genetic diversity of noroviruses (NoV), degenerate primer sets are often used in conventional reverse transcription (RT) PCR and real-time RT-quantitative PCR (RT-qPCR) for the detection of these viruses and cDNA fragments are generally cloned prior to sequencing. HAV detection methods that are sensitive and specific for real-time RT-qPCR yields small fragments sizes of 89-150bp, which can be difficult to sequence. In order to overcome these obstacles, norovirus and HAV primers were tailed with M13 forward and reverse primers. This modification increases the sequenced product size and allows for direct sequencing of the amplicons utilizing complementary M13 primers. HuNoV and HAV cDNA products from environmentally contaminated oysters were analyzed using this method. Alignments of the sequenced samples revealed ≥95% nucleotide identities. Tailing NoV and HAV primers with M13 sequence increases the cDNA product size, offers an alternative to cloning, and allows for rapid, accurate and direct sequencing of cDNA products produced by conventional or real time RT-qPCR assays. Published by Elsevier B.V.

An exploration of the feasibility of radiation therapist participation in treatment reviews

DOE Office of Scientific and Technical Information (OSTI.GOV)

Monk, Clare Maree; Wrightson, Stephanie Jane; Smith, Tony Neil

2013-09-15

As radiation oncologists' (ROs') workload has increased over time, treatment review clinics have become recognized as an area of RO practice into which radiation therapist (RT) practice could extend. There has been limited utilization of RTs in this role in Australia and a paucity of data on the acceptability and opinions regarding RTs practising in this role in an Australian context. The purpose of this audit was to investigate the feasibility of RT participation in review clinics at Calvary Mater Newcastle. Feasibility was determined by two methods: an audit of 200 treatment reviews to determine medical intervention (MI) levels requiredmore » and a survey of 80 clinical staff to explore attitudes towards RT participation in clinics. Medical intervention was required in 59% (n = 118) of observed reviews, with the lowest being for breast (33%) and prostate (28%) cancers. MI peaked at 73% between fractions 16–20 and was lowest early and late in the treatment period at 48%. There were 60 responses to the staff survey. All but one respondent agreed that RTs would be willing to participate in treatment review clinics, but all five consultant ROs indicated they would not be willing to delegate reviews to RTs. Neither feasibility measure reached acceptable levels to recommend RT participation in treatment review clinics. Further investigation and RT education are required to help meet the future RO workforce shortfall. As MI rates are lowest for breast and prostate cancer RT participation could be targeted to these clinics.« less

Spectral distribution of solar radiation

NASA Technical Reports Server (NTRS)

Mecherikunnel, A. T.; Richmond, J.

1980-01-01

Available quantitative data on solar total and spectral irradiance are examined in the context of utilization of solar irradiance for terrestrial applications of solar energy. The extraterrestrial solar total and spectral irradiance values are also reviewed. Computed values of solar spectral irradiance at ground level for different air mass values and various levels of atmospheric pollution or turbidity are presented. Wavelengths are given for computation of solar, absorptance, transmittance and reflectance by the 100 selected-ordinate method and by the 50 selected-ordinate method for air mass 1.5 and 2 solar spectral irradiance for the four levels of atmospheric pollution.

Developing and Evaluating RGB Composite MODIS Imagery for Applications in National Weather Service Forecast Offices

NASA Technical Reports Server (NTRS)

Oswald, Hayden; Molthan, Andrew L.

2011-01-01

Satellite remote sensing has gained widespread use in the field of operational meteorology. Although raw satellite imagery is useful, several techniques exist which can convey multiple types of data in a more efficient way. One of these techniques is multispectral compositing. The NASA Short-term Prediction Research and Transition (SPoRT) Center has developed two multispectral satellite imagery products which utilize data from the Moderate Resolution Imaging Spectroradiometer (MODIS) aboard NASA's Terra and Aqua satellites, based upon products currently generated and used by the European Organization for the Exploitation of Meteorological Satellites (EUMETSAT). The nighttime microphysics product allows users to identify clouds occurring at different altitudes, but emphasizes fog and low cloud detection. This product improves upon current spectral difference and single channel infrared techniques. Each of the current products has its own set of advantages for nocturnal fog detection, but each also has limiting drawbacks which can hamper the analysis process. The multispectral product combines each current product with a third channel difference. Since the final image is enhanced with color, it simplifies the fog identification process. Analysis has shown that the nighttime microphysics imagery product represents a substantial improvement to conventional fog detection techniques, as well as provides a preview of future satellite capabilities to forecasters.

Complete description of the optical path difference of a novel spectral zooming imaging spectrometer

NASA Astrophysics Data System (ADS)

Li, Jie; Wu, Haiying; Qi, Chun

2018-03-01

A complete description of the optical path difference of a novel spectral zooming imaging spectrometer (SZIS) is presented. SZIS is designed based on two identical Wollaston prisms with an adjustable air gap. Thus, interferogram with arbitrary spectral resolution and great reduction of spectral image size can be conveniently formed to adapt to different application requirements. Ray tracing modeling in arbitrary incidence with a quasi-parallel-plate approximation scheme is proposed to analyze the optical path difference of SZIS. In order to know the characteristics of the apparatus, exact calculations of the corresponding spectral resolution and field of view are both derived and analyzed in detail. We also present a comparison of calculation and experiment to prove the validity of the theory.

Current and Future Applications of Multispectral (RGB) Satellite Imagery for Weather Analysis and Forecasting Applications

NASA Technical Reports Server (NTRS)

Molthan, Andrew L.; Fuell, Kevin K.; LaFontaine, Frank; McGrath, Kevin; Smith, Matt

2013-01-01

Current and future satellite sensors provide remotely sensed quantities from a variety of wavelengths ranging from the visible to the passive microwave, from both geostationary and low ]Earth orbits. The NASA Short ]term Prediction Research and Transition (SPoRT) Center has a long history of providing multispectral imagery from the Moderate Resolution Imaging Spectroradiometer (MODIS) aboard NASA fs Terra and Aqua satellites in support of NWS forecast office activities. Products from MODIS have recently been extended to include a broader suite of multispectral imagery similar to those developed by EUMETSAT, based upon the spectral channels available from the Spinning Enhanced Visible and Infrared Imager (SEVIRI) aboard METEOSAT ]9. This broader suite includes products that discriminate between air mass types associated with synoptic ]scale features, assists in the identification of dust, and improves upon paired channel difference detection of fog and low cloud events. Future instruments will continue the availability of these products and also expand upon current capabilities. The Advanced Baseline Imager (ABI) on GOES ]R will improve the spectral, spatial, and temporal resolution of our current geostationary capabilities, and the recent launch of the Suomi National Polar ]Orbiting Partnership (S ]NPP) carries instruments such as the Visible Infrared Imager Radiometer Suite (VIIRS), the Cross ]track Infrared Sounder (CrIS), and the Advanced Technology Microwave Sounder (ATMS), which have unrivaled spectral and spatial resolution, as precursors to the JPSS era (i.e., the next generation of polar orbiting satellites. New applications from VIIRS extend multispectral composites available from MODIS and SEVIRI while adding new capabilities through incorporation of additional CrIS channels or information from the Near Constant Contrast or gDay ]Night Band h, which provides moonlit reflectance from clouds and detection of fires or city lights. This presentation will present a review of SPoRT, CIRA, and NRL collaborations regarding multispectral satellite imagery and recent applications within the operational forecasting environment

Abnormal neuronal response to rectal and anal stimuli in patients treated with primary radiotherapy for anal cancer.

PubMed

Haas, Susanne; Faaborg, Pia; Gram, Mikkel; Lundby, Lilli; Brock, Christina; Drewes, Anbjørn M; Laurberg, Søren; Krogh, Klaus; Christensen, Peter

2018-04-26

Sphincter-sparing radiotherapy or chemoradiation (RT/CRT) have become the standard treatments for most patients with anal cancer. Unfortunately, long-term survivors often suffer from severe bowel symptoms indicating sensory dysfunction. The aim of the present study was to characterize the sensory pathways of the brain-gut axis after radiotherapy for anal cancer. Cortical evoked potentials (CEPs) were recorded during repeated, rapid balloon distensions of the rectum and anal canal in 13 patients with anal cancer treated with radiotherapy or chemoradiation and in 17 healthy volunteers. Latencies and amplitudes of rectal CEPs were compared between the groups. CEPs from both rectal and anal distensions were examined using single sweep spectral band analysis to determine the relative amplitude of five spectral bands as a proxy of neuronal processing. Groups were comparable by age (62.4 ± 7.8 vs 58.9 ± 8.9, p < 0.32) and gender. Patients had a mean Wexner fecal incontinence score of 5.5 (±3.8) and median LARS Score of 29 (0-39). Rectal CEP latencies were prolonged in patients (F = 11.7; p < 0.001), whereas amplitudes were similar (F = 0.003; p = 0.96). Spectral analysis of CEPs from rectal distensions showed significant differences between groups in theta (4-8 Hz), alpha (8-12 Hz), beta (12-32 Hz) and gamma (32-70 Hz) bands (all p < 0.001) and CEPs from anal distensions showed significant differences in the alpha, beta and gamma bands (all p ≤ 0.002). Patients treated with RT/CRT for anal cancer have impaired ano-rectal sensory pathways and abnormal cortical processing. This may play a central role for the pathogenesis of late proctopathy. Copyright © 2018 Elsevier B.V. All rights reserved.

Design, Synthesis and Evaluation of Ribose-modified Anilinopyrimidine Derivatives as EGFR Tyrosine Kinase Inhibitors

NASA Astrophysics Data System (ADS)

Hu, Xiuqin; Wang, Disha; Tong, Yi; Tong, Linjiang; Wang, Xia; Zhu, Lili; Xie, Hua; Li, Shiliang; Yang, You; Xu, Yufang

2017-11-01

The synthesis of a series of ribose-modified anilinopyrimidine derivatives was efficiently achieved by utilizing DBU or tBuOLi-promoted coupling of ribosyl alcohols with 2,4,5-trichloropyrimidine as key step. Preliminary biological evaluation of this type of compounds as new EGFR tyrosine kinase inhibitors for combating EGFR L858R/T790M mutant associated with drug resistance in the treatment of non-small cell lung cancer revealed that 3-N-acryloyl-5-O-anilinopyrimidine ribose derivative 1a possessed potent and specific inhibitory activity against EGFR L858R/T790M over WT EGFR. Based upon molecular docking studies of the binding mode between compound 1a and EGFR, the distance between the Michael receptor and the pyrimidine scaffold is considered as an important factor for the inhibitory potency and future design of selective EGFR tyrosine kinase inhibitors against EGFR L858R/T790M mutants.

Electronic single-molecule identification of carbohydrate isomers by recognition tunnelling

NASA Astrophysics Data System (ADS)

Im, Jongone; Biswas, Sovan; Liu, Hao; Zhao, Yanan; Sen, Suman; Biswas, Sudipta; Ashcroft, Brian; Borges, Chad; Wang, Xu; Lindsay, Stuart; Zhang, Peiming

2016-12-01

Carbohydrates are one of the four main building blocks of life, and are categorized as monosaccharides (sugars), oligosaccharides and polysaccharides. Each sugar can exist in two alternative anomers (in which a hydroxy group at C-1 takes different orientations) and each pair of sugars can form different epimers (isomers around the stereocentres connecting the sugars). This leads to a vast combinatorial complexity, intractable to mass spectrometry and requiring large amounts of sample for NMR characterization. Combining measurements of collision cross section with mass spectrometry (IM-MS) helps, but many isomers are still difficult to separate. Here, we show that recognition tunnelling (RT) can classify many anomers and epimers via the current fluctuations they produce when captured in a tunnel junction functionalized with recognition molecules. Most importantly, RT is a nanoscale technique utilizing sub-picomole quantities of analyte. If integrated into a nanopore, RT would provide a unique approach to sequencing linear polysaccharides.

Current Usage and Future Prospects of Multispectral (RGB) Satellite Imagery in Support of NWS Forecast Offices and National Centers

NASA Technical Reports Server (NTRS)

Molthan, Andrew L.; Fuell, Kevin K.; Knaff, John; Lee, Thomas

2012-01-01

Current and future satellite sensors provide remotely sensed quantities from a variety of wavelengths ranging from the visible to the passive microwave, from both geostationary and low-Earth orbits. The NASA Short-term Prediction Research and Transition (SPoRT) Center has a long history of providing multispectral imagery from the Moderate Resolution Imaging Spectroradiometer (MODIS) aboard NASA s Terra and Aqua satellites in support of NWS forecast office activities. Products from MODIS have recently been extended to include a broader suite of multispectral imagery similar to those developed by EUMETSAT, based upon the spectral channel s available from the Spinning Enhanced Visible and InfraRed Imager (SEVIRI) aboard METEOSAT-9. This broader suite includes products that discriminate between air mass types associated with synoptic-scale features, assists in the identification of dust, and improves upon paired channel difference detection of fog and low cloud events. Similarly, researchers at NOAA/NESDIS and CIRA have developed air mass discrimination capabilities using channels available from the current GOES Sounders. Other applications of multispectral composites include combinations of high and low frequency, horizontal and vertically polarized passive microwave brightness temperatures to discriminate tropical cyclone structures and other synoptic-scale features. Many of these capabilities have been transitioned for evaluation and operational use at NWS Weather Forecast Offices and National Centers through collaborations with SPoRT and CIRA. Future instruments will continue the availability of these products and also expand upon current capabilities. The Advanced Baseline Imager (ABI) on GOES-R will improve the spectral, spatial, and temporal resolution of our current geostationary capabilities, and the recent launch of the Suomi National Polar-Orbiting Partnership (S-NPP) carries instruments such as the Visible Infrared Imager Radiometer Suite (VIIRS), the Cross-track Infrared Sounder (CrIS), and the Advanced Technology Microwave Sounder (ATMS), which have unrivaled spectral and spatial resolution, as precursors to the JPSS era (i.e., the next generation of polar orbiting satellites). At the same time, new image manipulation and display capabilities are available within AWIPS II, the next generation of the NWS forecaster decision support system. This presentation will present a review of SPoRT, CIRA, and NRL collaborations regarding multispectral satellite imagery and articulate an integrated and collaborative path forward with Raytheon AWIPS II development staff for integrating current and future capabilities that support new satellite instrumentation and the AWIPS II decision support system.

Labview utilities

DOE Office of Scientific and Technical Information (OSTI.GOV)

Persaud, Arun

2011-09-30

The software package provides several utilities written in LabView. These utilities don't form independent programs, but rather can be used as a library or controls in other labview programs. The utilities include several new controls (xcontrols), VIs for input and output routines, as well as other 'helper'-functions not provided in the standard LabView environment.

Design and laboratory calibration of the compact pushbroom hyperspectral imaging system

NASA Astrophysics Data System (ADS)

Zhou, Jiankang; Ji, Yiqun; Chen, Yuheng; Chen, Xinhua; Shen, Weimin

2009-11-01

The designed hyperspectral imaging system is composed of three main parts, that is, optical subsystem, electronic subsystem and capturing subsystem. And a three-dimensional "image cube" can be obtained through push-broom. The fore-optics is commercial-off-the-shelf with high speed and three continuous zoom ratios. Since the dispersive imaging part is based on Offner relay configuration with an aberration-corrected convex grating, high power of light collection and variable view field are obtained. The holographic recording parameters of the convex grating are optimized, and the aberration of the Offner configuration dispersive system is balanced. The electronic system adopts module design, which can minimize size, mass, and power consumption. Frame transfer area-array CCD is chosen as the image sensor and the spectral line can be binned to achieve better SNR and sensitivity without any deterioration in spatial resolution. The capturing system based on the computer can set the capturing parameters, calibrate the spectrometer, process and display spectral imaging data. Laboratory calibrations are prerequisite for using precise spectral data. The spatial and spectral calibration minimize smile and keystone distortion caused by optical system, assembly and so on and fix positions of spatial and spectral line on the frame area-array CCD. Gases excitation lamp is used in smile calibration and the keystone calculation is carried out by different viewing field point source created by a series of narrow slit. The laboratory and field imaging results show that this pushbroom hyperspectral imaging system can acquire high quality spectral images.

Cost-Effectiveness Analysis of Radiation Therapy Versus Transoral Robotic Surgery for Oropharyngeal Squamous Cell Carcinoma.

PubMed

Rodin, Danielle; Caulley, Lisa; Burger, Emily; Kim, Jane; Johnson-Obaseki, Stephanie; Palma, David; Louie, Alexander V; Hansen, Aaron; O'Sullivan, Brian

2017-03-15

The objective of this study was to compare the cost-effectiveness of transoral robotic surgery (TORS) versus the standard treatment modality for oropharyngeal squamous cell carcinoma (OPSCC), radiation therapy (RT), in a subset of patients with early-stage OPSCC. We developed a microsimulation state-transition model associated with RT and TORS for patients with clinically staged T1N0M0 to T2N1M0 OPSCC. Transition probabilities, utilities, and costs for each health state were estimated from recently published data and discounted by 3% annually over a lifetime time horizon. Model outcomes included lifetime costs (in 2014 US dollars), health benefits (quality-adjusted life-years [QALYs]), and cost-effectiveness ratios from a societal perspective. Under base-case assumptions, TORS was associated with modest gains in QALYs. RT yielded 10.43 QALYs at a cost of $123,410 per patient, whereas TORS yielded 11.10 QALYs at a cost of $178,480. This resulted in an incremental cost-effectiveness ratio of $82,190/QALY gained. The incremental cost-effectiveness ratio was most sensitive to the need for adjuvant therapy, cost of late toxicity, age at diagnosis, disease state utilities, and discount rate. Accounting for joint parameter uncertainty, RT had a higher probability of demonstrating a cost-effective profile compared with TORS, at 54% compared with 46%. By use of standard benchmarks for cost-effectiveness in the United States, TORS may be a cost-effective alternative for the subset of patients with early-stage OPSCC but demonstrates considerable sensitivity to assumptions around quality of life. Copyright © 2016. Published by Elsevier Inc.

Laboratory Evaluation of Commercially Available Platforms to Detect West Nile and Zika Viruses From Honey Cards.

PubMed

Burkhalter, Kristen L; Wiggins, Keenan; Burkett-Cadena, Nathan; Alto, Barry W

2018-05-04

Commercially available assays utilizing antigen or nucleic acid detection chemistries provide options for mosquito control districts to screen their mosquito populations for arboviruses and make timely operational decisions regarding vector control. These assays may be utilized even more advantageously when combined with honey-soaked nucleic acid preservation substrate ('honey card') testing by reducing or replacing the time- and labor-intensive efforts of identifying and processing mosquito pools. We tested artificially inoculated honey cards and cards fed upon individually by West Nile virus (WNV) and Zika virus (ZIKV)-infected mosquitoes with three assays to compare detection rates and the limit of detection for each platform with respect to virus detection of a single infected mosquito and quantify the time interval of virus preservation on the cards. Assays evaluated included CDC protocols for real-time reverse transcriptase polymerase chain reaction (RT-PCR) for WNV and ZIKV, Pro-Lab Diagnostics ProAmpRT WNV loop-mediated amplification (LAMP) and ZIKV LAMP assays, and the Rapid Analyte Measurement Platform (RAMP) WNV assay. Real-time RT-PCR was the most sensitive assay and the most robust to viral RNA degradation over time. To maximize the detection of virus, honey cards should be left in the traps ≤1 d if using LAMP assays and ≤3 d if using real-time RT-PCR to detect viruses from field samples. The WNV RAMP assay, although effective for pool screening, lacks sensitivity required for honey card surveillance. Future studies may determine the minimum number of infectious mosquitoes required to feed on a honey card that would be reliably detected by the LAMP or RAMP assays.

Empirical Recommendations for Improving the Stability of the Dot-Probe Task in Clinical Research

PubMed Central

Price, Rebecca B.; Kuckertz, Jennie M.; Siegle, Greg J.; Ladouceur, Cecile D.; Silk, Jennifer S.; Ryan, Neal D.; Dahl, Ronald E.; Amir, Nader

2014-01-01

The dot-probe task has been widely used in research to produce an index of biased attention based on reaction times (RTs). Despite its popularity, very few published studies have examined psychometric properties of the task, including test-retest reliability, and no previous study has examined reliability in clinically anxious samples or systematically explored the effects of task design and analysis decisions on reliability. In the current analysis, we utilized dot-probe data from three studies where attention bias towards threat-related faces was assessed at multiple (≥5) timepoints. Two of the studies were similar (adults with Social Anxiety Disorder, similar design features) while one was much more disparate (pediatric healthy volunteers, distinct task design). We explored the effects of analysis choices (e.g., bias score calculation formula, methods for outlier handling) on reliability and searched for convergence of findings across the three studies. We found that, when considering the three studies concurrently, the most reliable RT bias index utilized data from dot-bottom trials, comparing congruent to incongruent trials, with rescaled outliers, particularly after averaging across more than one assessment point. Although reliability of RT bias indices was moderate to low under most circumstances, within-session variability in bias (attention bias variability; ABV), a recently proposed RT index, was more reliable across sessions. Several eyetracking-based indices of attention bias (available in the pediatric healthy sample only) showed reliability that matched the optimal RT index (ABV). On the basis of these findings, we make specific recommendations to researchers using the dot probe, particularly those wishing to investigate individual differences and/or single-patient applications. PMID:25419646

Utility of the General Ability Index (GAI) and Cognitive Proficiency Index (CPI) with Survivors of Pediatric Brain Tumors: Comparison to Full Scale IQ and Premorbid IQ Estimates

PubMed Central

Kahalley, Lisa S.; Winter-Greenberg, Amanda; Stancel, Heather; Ris, M. Douglas; Gragert, Marsha

2016-01-01

Introduction Pediatric brain tumor survivors are at risk for working memory and processing speed impairment. The General Ability Index (GAI) provides an estimate of intellectual functioning that is less influenced by working memory and processing speed than a Full Scale IQ (FSIQ). The Cognitive Proficiency Index (CPI) provides a measure of efficient information processing derived from working memory and processing speed tasks. We examined the utility of the GAI and CPI to quantify neurocognitive outcomes in a sample of pediatric brain tumor survivors. Methods GAI, CPI, and FSIQ scores from the Wechsler Intelligence Scale for Children-Fourth Edition (WISC-IV) were examined for 57 pediatric brain tumor survivors (ages 6–16) treated with cranial radiation therapy (RT). Results GAI scores were higher than FSIQ and CPI scores, both p < .001. Lower CPI scores were associated with history of craniospinal irradiation and time since RT. Lower FSIQ and GAI scores were associated with higher RT dose and time since RT. The rate of clinically significant GAI-FSIQ discrepancies in our sample was greater than observed in the WISC-IV standardization sample, p < .001. Estimated premorbid IQ scores were higher than GAI, p < .01, and FSIQ scores, p < .001. Conclusions Pediatric brain tumor survivors exhibit weaker cognitive proficiency than expected for age, while general reasoning ability remains relatively spared. The GAI may be useful to quantify the intellectual potential of a survivor when appropriate accommodations are in place for relative cognitive proficiency weaknesses. The CPI may be a particularly sensitive outcome measure of treatment-related cognitive change in this population. PMID:27295192

High-throughput flow injection analysis mass spectroscopy with networked delivery of color-rendered results. 2. Three-dimensional spectral mapping of 96-well combinatorial chemistry racks.

PubMed

Görlach, E; Richmond, R; Lewis, I

1998-08-01

For the last two years, the mass spectroscopy section of the Novartis Pharma Research Core Technology group has analyzed tens of thousands of multiple parallel synthesis samples from the Novartis Pharma Combinatorial Chemistry program, using an in-house developed automated high-throughput flow injection analysis electrospray ionization mass spectroscopy system. The electrospray spectra of these samples reflect the many structures present after the cleavage step from the solid support. The overall success of the sequential synthesis is mirrored in the purity of the expected end product, but the partial success of individual synthesis steps is evident in the impurities in the mass spectrum. However this latter reaction information, which is of considerable utility to the combinatorial chemist, is effectively hidden from view by the very large number of analyzed samples. This information is now revealed at the workbench of the combinatorial chemist by a novel three-dimensional display of each rack's complete mass spectral ion current using the in-house RackViewer Visual Basic application. Colorization of "forbidden loss" and "forbidden gas-adduct" zones, normalization to expected monoisotopic molecular weight, colorization of ionization intensity, and sorting by row or column were used in combination to highlight systematic patterns in the mass spectroscopy data.

Urinary adverse effects of pelvic radiotherapy

PubMed Central

Liberman, Daniel; Mehus, Brian

2014-01-01

Objective Radiation is an integral part of the treatment of many pelvic tumors. The cellular death induced by radiotherapy (RT) benefits cancer control but can also result in adverse effects (AEs) on the organ being treated or those adjacent to it. RT for cancers of the pelvis (bladder, prostate, rectum, uterus or cervix) can result in AEs in the urinary tract. While the acute urinary AEs of pelvic RT are well described, late AEs are less well characterized. The burden of treatment for late AEs may be large given the prevalence of tumors in the pelvis and the high utilization of RT to treat them. Review For prostate cancer, grade 1 and 2 urinary AEs following external beam radiation therapy (EBRT) are reported to occur in 20-43% and 7-19%, respectively, with a follow up of 10 years. Three-year cumulative risk for grade ≥2 urinary AEs is 28-30%. Following brachytherapy (BT), rates of urinary AEs at 5 years are reported to be 36%, 24%, 6.2% and 0.1% for Radiation Therapy Oncology Group (RTOG) grade 1, 2, 3, and 4, respectively. For bladder cancer, with a median follow-up of 5 years, 7-12% of patients who receive RT experience urinary AEs of grade 3 or more. For cervical cancer, there remains a 0.25% per year risk of severe AEs for at least 25 years following RT, and ureteral stricture is a well-described AE. For endometrial cancer, severe urinary AEs are rare, but at 13 years of follow up, patients report a significantly worse quality of life with respect to urinary function. In rectal cancer, preoperative RT has a lower risk of AEs than postoperative RT, and few urinary AEs are reported in the literature. Conclusions Urinary AEs can manifest long after RT, and there is a paucity of studies describing rates of these long-term AEs. It is important that the possible complications of RT are recognized by providers and properly communicated to patients so that they are able to make informed decisions about their cancer treatment. PMID:26813159

Variation in spectral response of soybeans with respect to illumination, view, and canopy geometry

NASA Technical Reports Server (NTRS)

Ranson, K. J.; Biehl, L. L.; Bauer, M. E.

1984-01-01

Comparisons of the spectral response for incomplete (well-defined row structure) and complete (overlapping row structure) canopies of soybeans indicated a greater dependence on Sun and view geometry for the incomplete canopies. Red and near-IR reflectance for the incomplete canopy decreased as solar zenith angle increased for a nadir view angle until the soil between the plant rows was completely shaded. Thereafter for increasing solar zenith angle, the red reflectance leveled off and the near-IR reflectance increased. A 'hot spot' effect was evident for the red and near-IR reflectance factors. The 'hot spot' effect was more pronounced for the red band based on relative reflectance value changes. The ratios of off-nadir to nadir acquired data reveal that off-nadir red band reflectance factors more closely approximated straightdown measurements for time periods away from solar noon. Normalized difference generally approximated straightdown measurements during the middle portion of the day.

[Application of BaSO4 diffuser plate in 250-400 nm spectral radiance calibration].

PubMed

Jia, Hui; Li, Fu-tian

2004-01-01

Sprayed BaSO4 diffuser plate is the most Lambertian surface actually used in spectral radiance calibration known by now. Its hemispheric reflectance and Bi-directional Reflectance Distribution Functions (BRDF) were measured in the experiment. Its diffuse characteristics were compared with Lambertian surface. In order to calibrate spectral radiance more accurately, the small variation of diffuser's BRDF with scattered angles and the nonuniformity of spectral irradiance on diffuser surface illuminated by the standard lamp should be considered. By integrating the radiation flux reflected by the element area and that entering the entrance slit within the viewing area of spectrometer, the measured spectral radiance can be calculated. Furthermore, the spectral radiance of Lambertian surface whose BRDF was derived from hemispheric reflectance was compared with that from the average of the measured BRDF.

The Retrieval of Aerosol Optical Thickness Using the MERIS Instrument

NASA Astrophysics Data System (ADS)

Mei, L.; Rozanov, V. V.; Vountas, M.; Burrows, J. P.; Levy, R. C.; Lotz, W.

2015-12-01

Retrieval of aerosol properties for satellite instruments without shortwave-IR spectral information, multi-viewing, polarization and/or high-temporal observation ability is a challenging problem for spaceborne aerosol remote sensing. However, space based instruments like the MEdium Resolution Imaging Spectrometer (MERIS) and the successor, Ocean and Land Colour Instrument (OLCI) with high calibration accuracy and high spatial resolution provide unique abilities for obtaining valuable aerosol information for a better understanding of the impact of aerosols on climate, which is still one of the largest uncertainties of global climate change evaluation. In this study, a new Aerosol Optical Thickness (AOT) retrieval algorithm (XBAER: eXtensible Bremen AErosol Retrieval) is presented. XBAER utilizes the global surface spectral library database for the determination of surface properties while the MODIS collection 6 aerosol type treatment is adapted for the aerosol type selection. In order to take the surface Bidirectional Reflectance Distribution Function (BRDF) effect into account for the MERIS reduce resolution (1km) retrieval, a modified Ross-Li mode is used. The AOT is determined in the algorithm using lookup tables including polarization created using Radiative Transfer Model SCIATRAN3.4, by minimizing the difference between atmospheric corrected surface reflectance with given AOT and the surface reflectance calculated from the spectral library. The global comparison with operational MODIS C6 product, Multi-angle Imaging SpectroRadiometer (MISR) product, Advanced Along-Track Scanning Radiometer (AATSR) aerosol product and the validation using AErosol RObotic NETwork (AERONET) show promising results. The current XBAER algorithm is only valid for aerosol remote sensing over land and a similar method will be extended to ocean later.

Geology team

NASA Technical Reports Server (NTRS)

1982-01-01

Evaluating of the combined utility of narrowband and multispectral imaging in both the infrared and visible for the lithologic identification of geologic materials, and of the combined utility of multispectral imaging in the visible and infrared for lithologic mapping on a global bases are near term recommendations for future imaging capabilities. Long term recommendations include laboratory research into methods of field sampling and theoretical models of microscale mixing. The utility of improved spatial and spectral resolutions and radiometric sensitivity is also suggested for the long term. Geobotanical remote sensing research should be conducted to (1) separate geological and botanical spectral signatures in individual picture elements; (2) study geobotanical correlations that more fully simulate natural conditions; and use test sites designed to test specific geobotanical hypotheses.

A wavelet and least square filter based spatial-spectral denoising approach of hyperspectral imagery

NASA Astrophysics Data System (ADS)

Li, Ting; Chen, Xiao-Mei; Chen, Gang; Xue, Bo; Ni, Guo-Qiang

2009-11-01

Noise reduction is a crucial step in hyperspectral imagery pre-processing. Based on sensor characteristics, the noise of hyperspectral imagery represents in both spatial and spectral domain. However, most prevailing denosing techniques process the imagery in only one specific domain, which have not utilized multi-domain nature of hyperspectral imagery. In this paper, a new spatial-spectral noise reduction algorithm is proposed, which is based on wavelet analysis and least squares filtering techniques. First, in the spatial domain, a new stationary wavelet shrinking algorithm with improved threshold function is utilized to adjust the noise level band-by-band. This new algorithm uses BayesShrink for threshold estimation, and amends the traditional soft-threshold function by adding shape tuning parameters. Comparing with soft or hard threshold function, the improved one, which is first-order derivable and has a smooth transitional region between noise and signal, could save more details of image edge and weaken Pseudo-Gibbs. Then, in the spectral domain, cubic Savitzky-Golay filter based on least squares method is used to remove spectral noise and artificial noise that may have been introduced in during the spatial denoising. Appropriately selecting the filter window width according to prior knowledge, this algorithm has effective performance in smoothing the spectral curve. The performance of the new algorithm is experimented on a set of Hyperion imageries acquired in 2007. The result shows that the new spatial-spectral denoising algorithm provides more significant signal-to-noise-ratio improvement than traditional spatial or spectral method, while saves the local spectral absorption features better.

Spectral methods and their implementation to solution of aerodynamic and fluid mechanic problems

NASA Technical Reports Server (NTRS)

Streett, C. L.

1987-01-01

Fundamental concepts underlying spectral collocation methods, especially pertaining to their use in the solution of partial differential equations, are outlined. Theoretical accuracy results are reviewed and compared with results from test problems. A number of practical aspects of the construction and use of spectral methods are detailed, along with several solution schemes which have found utility in applications of spectral methods to practical problems. Results from a few of the successful applications of spectral methods to problems of aerodynamic and fluid mechanic interest are then outlined, followed by a discussion of the problem areas in spectral methods and the current research under way to overcome these difficulties.

Rapid and sensitive detection of Feline immunodeficiency virus using an insulated isothermal PCR-based assay with a point-of-need PCR detection platform.

PubMed

Wilkes, Rebecca Penrose; Kania, Stephen A; Tsai, Yun-Long; Lee, Pei-Yu Alison; Chang, Hsiu-Hui; Ma, Li-Juan; Chang, Hsiao-Fen Grace; Wang, Hwa-Tang Thomas

2015-07-01

Feline immunodeficiency virus (FIV) is an important infectious agent of cats. Clinical syndromes resulting from FIV infection include immunodeficiency, opportunistic infections, and neoplasia. In our study, a 5' long terminal repeat/gag region-based reverse transcription insulated isothermal polymerase chain reaction (RT-iiPCR) was developed to amplify all known FIV strains to facilitate point-of-need FIV diagnosis. The RT-iiPCR method was applied in a point-of-need PCR detection platform--a field-deployable device capable of generating automatically interpreted RT-iiPCR results from nucleic acids within 1 hr. Limit of detection 95% of FIV RT-iiPCR was calculated to be 95 copies standard in vitro transcription RNA per reaction. Endpoint dilution studies with serial dilutions of an ATCC FIV type strain showed that the sensitivity of lyophilized FIV RT-iiPCR reagent was comparable to that of a reference nested PCR. The established reaction did not amplify any nontargeted feline pathogens, including Felid herpesvirus 1, feline coronavirus, Feline calicivirus, Feline leukemia virus, Mycoplasma haemofelis, and Chlamydophila felis. Based on analysis of 76 clinical samples (including blood and bone marrow) with the FIV RT-iiPCR, test sensitivity was 97.78% (44/45), specificity was 100.00% (31/31), and agreement was 98.65% (75/76), determined against a reference nested-PCR assay. A kappa value of 0.97 indicated excellent correlation between these 2 methods. The lyophilized FIV RT-iiPCR reagent, deployed on a user-friendly portable device, has potential utility for rapid and easy point-of-need detection of FIV in cats. © 2015 The Author(s).

Evaluation of Two Lyophilized Molecular Assays to Rapidly Detect Foot-and-Mouth Disease Virus Directly from Clinical Samples in Field Settings.

PubMed

Howson, E L A; Armson, B; Madi, M; Kasanga, C J; Kandusi, S; Sallu, R; Chepkwony, E; Siddle, A; Martin, P; Wood, J; Mioulet, V; King, D P; Lembo, T; Cleaveland, S; Fowler, V L

2017-06-01

Accurate, timely diagnosis is essential for the control, monitoring and eradication of foot-and-mouth disease (FMD). Clinical samples from suspect cases are normally tested at reference laboratories. However, transport of samples to these centralized facilities can be a lengthy process that can impose delays on critical decision making. These concerns have motivated work to evaluate simple-to-use technologies, including molecular-based diagnostic platforms, that can be deployed closer to suspect cases of FMD. In this context, FMD virus (FMDV)-specific reverse transcription loop-mediated isothermal amplification (RT-LAMP) and real-time RT-PCR (rRT-PCR) assays, compatible with simple sample preparation methods and in situ visualization, have been developed which share equivalent analytical sensitivity with laboratory-based rRT-PCR. However, the lack of robust 'ready-to-use kits' that utilize stabilized reagents limits the deployment of these tests into field settings. To address this gap, this study describes the performance of lyophilized rRT-PCR and RT-LAMP assays to detect FMDV. Both of these assays are compatible with the use of fluorescence to monitor amplification in real-time, and for the RT-LAMP assays end point detection could also be achieved using molecular lateral flow devices. Lyophilization of reagents did not adversely affect the performance of the assays. Importantly, when these assays were deployed into challenging laboratory and field settings within East Africa they proved to be reliable in their ability to detect FMDV in a range of clinical samples from acutely infected as well as convalescent cattle. These data support the use of highly sensitive molecular assays into field settings for simple and rapid detection of FMDV. © 2015 The Authors. Transboundary and Emerging Diseases Published by Blackwell Verlag GmbH.

Testosterone Production is Better Preserved After 16 than 20 Gray Irradiation Treatment Against Testicular Carcinoma In Situ Cells

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bang, Anne K.; Petersen, Jorgen H.; Department of Biostatistics, University of Copenhagen, DK-2200 Copenhagen

Purpose: To study the effect of 16 Gy radiotherapy (RT) vs. 20 Gy RT on Leydig cell function in men treated with radiotherapy against carcinoma in situ (CIS) of the testis. Methods and Materials: Fifty-one men who were treated between 1985 and 2005 were included. Fourteen men had been treated with 20 Gy and 37 with 16 Gy RT. Measurements of sex hormone-binding globulin and basic and stimulated testosterone, as well as luteinizing hormone levels were performed. Results: The follow-up periods for the patients treated without additional chemotherapy were for the 20 Gy and 16 Gy group mean/median/min-max: 9.0/10.0/1.0-20.3 yearsmore » and 4.0/3.1/0.4-14.1 years, respectively. During the follow-up period, men treated with 16 Gy RT had stable testosterone levels (-1.1%/year, p = 0.4), whereas men treated with 20 Gy had an annual decrease of 2.4% (p = 0.008). For the latter group, the testosterone decrease was most pronounced in the first 5 years, leveling off during the following 5 years. Additionally, more men treated with 20 Gy needed androgen substitution treatment. Our study showed an increased luteinizing hormone level for the men treated with 16 Gy, although this was not significant (p = 0.5). We anticipated a similar increase in the patients treated with 20 Gy but instead observed a decrease (-3.1%, p = 0.01). Conclusion: RT at 16 and 20 Gy seem to affect Leydig cell function differently, with 16 Gy RT better preserving testosterone levels and thus being preferred from an endocrinological point of view.« less

Urban Legends and Paranormal Beliefs: The Role of Reality Testing and Schizotypy

PubMed Central

Dagnall, Neil; Denovan, Andrew; Drinkwater, Kenneth; Parker, Andrew; Clough, Peter J.

2017-01-01

Recent research suggests that unconventional beliefs are locatable within a generic anomalous belief category. This notion derives from the observation that apparently dissimilar beliefs share fundamental, core characteristics (i.e., contradiction of orthodox scientific understanding of the universe and defiance of conventional understanding of reality). The present paper assessed the supposition that anomalous beliefs were conceptually similar and explicable via common psychological processes by comparing relationships between discrete beliefs [endorsement of urban legends (ULs) and belief in the paranormal] and cognitive-perceptual personality measures [proneness to reality testing (RT) and schizotypy]. A sample of 222 volunteers, recruited via convenience sampling, took part in the study. Participants completed a series of self-report measures (Urban Legends Questionnaire, Reality Testing subscale of the Inventory of Personality Organization, Revised Paranormal Belief Scale and the Schizotypal Personality Questionnaire Brief). Preliminary analysis revealed positive correlations between measures. Within schizotypy, the cognitive-perceptual factor was most strongly associated with anomalistic beliefs; disorganized and interpersonal produced only weak and negligible correlations respectively. Further investigation indicated complex relationships between RT, the cognitive-perceptual factor of schizotypy and anomalistic beliefs. Specifically, proneness to RT deficits explained a greater amount of variance in ULs, whilst schizotypy accounted for more variance in belief in the paranormal. Consideration of partial correlations supported these conclusions. The relationship between RT and ULs remained significant after controlling for the cognitive-perceptual factor. Contrastingly, the association between the cognitive-perceptual factor and ULs controlling for RT was non-significant. In the case of belief in the paranormal, controlling for proneness to RT reduced correlation size, but relationships remained significant. This study demonstrated that anomalistic beliefs vary in nature and composition. Findings indicated that generalized views of anomalistic beliefs provide only limited insight into the complex nature of belief. PMID:28642726

Urban Legends and Paranormal Beliefs: The Role of Reality Testing and Schizotypy.

PubMed

Dagnall, Neil; Denovan, Andrew; Drinkwater, Kenneth; Parker, Andrew; Clough, Peter J

2017-01-01

Recent research suggests that unconventional beliefs are locatable within a generic anomalous belief category. This notion derives from the observation that apparently dissimilar beliefs share fundamental, core characteristics (i.e., contradiction of orthodox scientific understanding of the universe and defiance of conventional understanding of reality). The present paper assessed the supposition that anomalous beliefs were conceptually similar and explicable via common psychological processes by comparing relationships between discrete beliefs [endorsement of urban legends (ULs) and belief in the paranormal] and cognitive-perceptual personality measures [proneness to reality testing (RT) and schizotypy]. A sample of 222 volunteers, recruited via convenience sampling, took part in the study. Participants completed a series of self-report measures (Urban Legends Questionnaire, Reality Testing subscale of the Inventory of Personality Organization, Revised Paranormal Belief Scale and the Schizotypal Personality Questionnaire Brief). Preliminary analysis revealed positive correlations between measures. Within schizotypy, the cognitive-perceptual factor was most strongly associated with anomalistic beliefs; disorganized and interpersonal produced only weak and negligible correlations respectively. Further investigation indicated complex relationships between RT, the cognitive-perceptual factor of schizotypy and anomalistic beliefs. Specifically, proneness to RT deficits explained a greater amount of variance in ULs, whilst schizotypy accounted for more variance in belief in the paranormal. Consideration of partial correlations supported these conclusions. The relationship between RT and ULs remained significant after controlling for the cognitive-perceptual factor. Contrastingly, the association between the cognitive-perceptual factor and ULs controlling for RT was non-significant. In the case of belief in the paranormal, controlling for proneness to RT reduced correlation size, but relationships remained significant. This study demonstrated that anomalistic beliefs vary in nature and composition. Findings indicated that generalized views of anomalistic beliefs provide only limited insight into the complex nature of belief.

A prognostic role for Nm23-H1 in laryngeal carcinoma treated with postoperative radiotherapy: an introductory investigation.

PubMed

Lionello, Marco; Blandamura, Stella; Agostini, Marco; Staffieri, Claudia; Lovato, Andrea; Tealdo, Giulia; Favaretto, Niccolò; Giacomelli, Luciano; Loreggian, Lucio; Staffieri, Alberto; Marioni, Gino

2013-01-01

Postoperative RT is generally recommended for laryngeal carcinomas (LSCCs) at high risk of recurrence after surgery. There are currently no clinicopathological parameters available to predict response to such adjuvant RT in LSCC, and only a few potentially predictive biomarkers have been investigated. Nm23-H1 protein is reportedly related to the tumor cells' metastatic potential, and low Nm23-H1 expression levels in human carcinomas often correlate with a poor prognosis. The novel aim of the present preliminary study was to investigate the prognostic value of Nm23-H1 expression and subcellular localization in a series of patients given postoperative RT for LSCC. A retrospective clinicopathological investigation was conducted at an academic tertiary referral center of 28 consecutive patients given postoperative RT for LSCC. Image analysis of immunohistochemical reactions was performed to measure Nm23-H1 total and nuclear expression levels. Disease-free survival (DFS) was significantly shorter among LSCC patients with total Nm23-H1 levels <50.0 % (p = 0.03); the mean total Nm23-H1 expression was lower in patients with recurrent disease than in patients without it (statistical trend, p = 0.07). The disease recurrence rate was significantly higher (p = 0.021) and the DFS shorter (statistical trend, p = 0.052) among LSCC patients with nuclear Nm23-H1 levels <5.0 %. The locoregional recurrence-risk ratio in LSCC patients with nuclear Nm23-H1 levels <5.0 % was 9.16. Nm23-H1 warrants further investigation of its potential role as a predictive biomarker with a view to providing tailored treatments after surgery, such as combinations of chemotherapy and RT instead of RT alone, in patients whose LSCCs have low or no Nm23-H1 expression.

Spectral Entropy Can Predict Changes of Working Memory Performance Reduced by Short-Time Training in the Delayed-Match-to-Sample Task

PubMed Central

Tian, Yin; Zhang, Huiling; Xu, Wei; Zhang, Haiyong; Yang, Li; Zheng, Shuxing; Shi, Yupan

2017-01-01

Spectral entropy, which was generated by applying the Shannon entropy concept to the power distribution of the Fourier-transformed electroencephalograph (EEG), was utilized to measure the uniformity of power spectral density underlying EEG when subjects performed the working memory tasks twice, i.e., before and after training. According to Signed Residual Time (SRT) scores based on response speed and accuracy trade-off, 20 subjects were divided into two groups, namely high-performance and low-performance groups, to undertake working memory (WM) tasks. We found that spectral entropy derived from the retention period of WM on channel FC4 exhibited a high correlation with SRT scores. To this end, spectral entropy was used in support vector machine classifier with linear kernel to differentiate these two groups. Receiver operating characteristics analysis and leave-one out cross-validation (LOOCV) demonstrated that the averaged classification accuracy (CA) was 90.0 and 92.5% for intra-session and inter-session, respectively, indicating that spectral entropy could be used to distinguish these two different WM performance groups successfully. Furthermore, the support vector regression prediction model with radial basis function kernel and the root-mean-square error of prediction revealed that spectral entropy could be utilized to predict SRT scores on individual WM performance. After testing the changes in SRT scores and spectral entropy for each subject by short-time training, we found that 16 in 20 subjects’ SRT scores were clearly promoted after training and 15 in 20 subjects’ SRT scores showed consistent changes with spectral entropy before and after training. The findings revealed that spectral entropy could be a promising indicator to predict individual’s WM changes by training and further provide a novel application about WM for brain–computer interfaces. PMID:28912701

IN SITU RT-PCR DETECTION OF CYP1A MRNA IN PHARYNGEAL EPITHELIUM AND CHONDROID CELLS OF CHEMICALLY UNTREATED FISH: INVOLVEMENT IN CRANIOFACIAL SKELETAL DEVELOPMENT? (R827102)

EPA Science Inventory

The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

Development of an automated scanning monochromator for sensitivity calibration of the MUSTANG instrument

NASA Astrophysics Data System (ADS)

Rivers, Thane D.

1992-06-01

An Automated Scanning Monochromator was developed using: an Acton Research Corporation (ARC) Monochromator, Ealing Photomultiplier Tube and a Macintosh PC in conjunction with LabVIEW software. The LabVIEW Virtual Instrument written to operate the ARC Monochromator is a mouse driven user friendly program developed for automated spectral data measurements. Resolution and sensitivity of the Automated Scanning Monochromator System were determined experimentally. The Automated monochromator was then used for spectral measurements of a Platinum Lamp. Additionally, the reflectivity curve for a BaSO4 coated screen has been measured. Reflectivity measurements indicate a large discrepancy with expected results. Further analysis of the reflectivity experiment is required for conclusive results.

Improving the power efficiency of SOA-based UWB over fiber systems via pulse shape randomization

NASA Astrophysics Data System (ADS)

Taki, H.; Azou, S.; Hamie, A.; Al Housseini, A.; Alaeddine, A.; Sharaiha, A.

2016-09-01

A simple pulse shape randomization scheme is considered in this paper for improving the performance of ultra wide band (UWB) communication systems using On Off Keying (OOK) or pulse position modulation (PPM) formats. The advantage of the proposed scheme, which can be either employed for impulse radio (IR) or for carrier-based systems, is first theoretically studied based on closed-form derivations of power spectral densities. Then, we investigate an application to an IR-UWB over optical fiber system, by utilizing the 4th and 5th orders of Gaussian derivatives. Our approach proves to be effective for 1 Gbps-PPM and 2 Gbps-OOK transmissions, with an advantage in terms of power efficiency for short distances. We also examine the performance for a system employing an in-line Semiconductor Optical Amplifier (SOA) with the view to achieve a reach extension, while limiting the cost and system complexity.

The utilization of orbital images as an adequate form of control of preserved areas. [Araguaia National Park, Brazil

NASA Technical Reports Server (NTRS)

Dejesusparada, N. (Principal Investigator); Dossantos, J. R.

1981-01-01

The synoptic view and the repetitive acquisition of LANDSAT imagery provide precise information, in real-time, for monitoring preserved areas based on spectral, temporal and spatial properties. The purpose of this study was to monitor, with the use of multispectral imagery, the systematic annual burning, which causes the degradation of ecosystems in the National Park of Araguaia. LANDSAT imagery of channel 5 (0.6 a 0.7 microns) and 7 (0.8 a 1.1 microns), at the scale of 1:250.000, were used to identify and delimit vegetation units and burned area, based on photointerpretation parameter of tonality. The results show that the gallery forest can be discriminated from the seasonally flooded 'campo cerrado', and that 4,14% of the study area was burned. Conclusions point out that the LANDSAT images can be used for the implementation of environmental protection in national parks.

Change Detection of High-Resolution Remote Sensing Images Based on Adaptive Fusion of Multiple Features

NASA Astrophysics Data System (ADS)

Wang, G. H.; Wang, H. B.; Fan, W. F.; Liu, Y.; Chen, C.

2018-04-01

In view of the traditional change detection algorithm mainly depends on the spectral information image spot, failed to effectively mining and fusion of multi-image feature detection advantage, the article borrows the ideas of object oriented analysis proposed a multi feature fusion of remote sensing image change detection algorithm. First by the multi-scale segmentation of image objects based; then calculate the various objects of color histogram and linear gradient histogram; utilizes the color distance and edge line feature distance between EMD statistical operator in different periods of the object, using the adaptive weighted method, the color feature distance and edge in a straight line distance of combination is constructed object heterogeneity. Finally, the curvature histogram analysis image spot change detection results. The experimental results show that the method can fully fuse the color and edge line features, thus improving the accuracy of the change detection.

Schematic for efficient computation of GC, GC3, and AT3 bias spectra of genome

PubMed Central

Rizvi, Ahsan Z; Venu Gopal, T; Bhattacharya, C

2012-01-01

Selection of synonymous codons for an amino acid is biased in protein translation process. This biased selection causes repetition of synonymous codons in structural parts of genome that stands for high N/3 peaks in DNA spectrum. Period-3 spectral property is utilized here to produce a 3-phase network model based on polyphase filterbank concepts for derivation of codon bias spectra (CBS). Modification of parameters in this model can produce GC, GC3, and AT3 bias spectra. Complete schematic in LabVIEW platform is presented here for efficient and parallel computation of GC, GC3, and AT3 bias spectra of genomes alongwith results of CBS patterns. We have performed the correlation coefficient analysis of GC, GC3, and AT3 bias spectra with codon bias patterns of CBS for biological and statistical significance of this model. PMID:22368390

Schematic for efficient computation of GC, GC3, and AT3 bias spectra of genome.

PubMed

Rizvi, Ahsan Z; Venu Gopal, T; Bhattacharya, C

2012-01-01

Selection of synonymous codons for an amino acid is biased in protein translation process. This biased selection causes repetition of synonymous codons in structural parts of genome that stands for high N/3 peaks in DNA spectrum. Period-3 spectral property is utilized here to produce a 3-phase network model based on polyphase filterbank concepts for derivation of codon bias spectra (CBS). Modification of parameters in this model can produce GC, GC3, and AT3 bias spectra. Complete schematic in LabVIEW platform is presented here for efficient and parallel computation of GC, GC3, and AT3 bias spectra of genomes alongwith results of CBS patterns. We have performed the correlation coefficient analysis of GC, GC3, and AT3 bias spectra with codon bias patterns of CBS for biological and statistical significance of this model.

Calibration and flight qualification of FORTIS

NASA Astrophysics Data System (ADS)

Fleming, Brian T.; McCandliss, Stephan R.; Redwine, Keith; Kaiser, Mary Elizabeth; Kruk, Jeffery; Feldman, Paul D.; Kutyrev, Alexander S.; Li, Mary J.; Moseley, S. H.; Siegmund, Oswald; Vallerga, John; Martin, Adrian

2013-09-01

The Johns Hopkins University sounding rocket group has completed the assembly and calibration of the Far-ultraviolet Off Rowland-circle Telescope for Imaging and Spectroscopy (FORTIS); a sounding rocket borne multi-object spectro-telescope designed to provide spectral coverage of up to 43 separate targets in the 900 - 1800 Angstrom bandpass over a 30' x 30' field-of-view. FORTIS is capable of selecting the far-UV brightest regions of the target area by utilizing an autonomous targeting system. Medium resolution (R ~ 400) spectra are recorded in redundant dual-order spectroscopic channels with ~40 cm2 of effective area at 1216 Å. The maiden launch of FORTIS occurred on May 10, 2013 out of the White Sands Missile Range, targeting the extended spiral galaxy M61 and nearby companion NGC 4301. We report on the final flight calibrations of the instrument, as well as the flight results.

Evaluation of FTA cards as a laboratory and field sampling device for the detection of foot-and-mouth disease virus and serotyping by RT-PCR and real-time RT-PCR.

PubMed

Muthukrishnan, Madhanmohan; Singanallur, Nagendrakumar B; Ralla, Kumar; Villuppanoor, Srinivasan A

2008-08-01

Foot-and-mouth disease virus (FMDV) samples transported to the laboratory from far and inaccessible areas for serodiagnosis pose a major problem in a tropical country like India, where there is maximum temperature fluctuation. Inadequate storage methods lead to spoilage of FMDV samples collected from clinically positive animals in the field. Such samples are declared as non-typeable by the typing laboratories with the consequent loss of valuable epidemiological data. The present study evaluated the usefulness of FTA Classic Cards for the collection, shipment, storage and identification of the FMDV genome by RT-PCR and real-time RT-PCR. The stability of the viral RNA, the absence of infectivity and ease of processing the sample for molecular methods make the FTA cards a useful option for transport of FMDV genome for identification and serotyping. The method can be used routinely for FMDV research as it is economical and the cards can be transported easily in envelopes by regular document transport methods. Live virus cannot be isolated from samples collected in FTA cards, which is a limitation. This property can be viewed as an advantage as it limits the risk of transmission of live virus.

PUMA: the first results of a nebular spectrograph for the study of the kinematics of interstellar medium

NASA Astrophysics Data System (ADS)

Langarica, Rosalia; Bernal, Abel; Rosado, Margarita; Cobos Duenas, Francisco J.; Garfias, Fernando; Gutierrez, Leonel; Le Coarer, Etienne; Tejada, Carlos; Tinoco, Silvio J.

1998-07-01

The kinematics of the interstellar medium may be studied by means of a scanning Fabry-Perot interferometer (SFPI). This allows the coverage of a wider field of view with higher spatial and spectral resolution than when a high-dispersion classical spectrograph is used. The system called PUMA consists of a focal reducer and a SFPI installed in the 2.1 m telescope of the San Pedro Martir National Astronomical Observatory (SPM), Mexico, in its f/7.5 configuration. It covers a field of view of 10 arcmin providing direct images as well as interferograms which are focused on a 1024 X 1024 Tektronix CCD, covering a wide spectral range. It is considered the integration of other optical elements for further developments. The optomechanical system and the developed software allow exact, remote positioning of all movable parts and control the FPI scanning and data acquisition. The parallelism of the interferometer plates is automatically achieved by a custom method. The PUMA provides spectral resolutions of 0.414 Angstrom and a free spectral range of 19.8 Angstrom. Results of high quality that compete with those obtained by similar systems in bigger telescopes, are presented.

Wide field of view spectroscopy using solid Fabry-Perot interferometers

NASA Astrophysics Data System (ADS)

Nikoleyczik, Jonathan; Kutyrev, Alexander; Moseley, Harvey; Veilleux, Sylvain

2016-08-01

We present a high resolution spectrometer consisting of dual solid Fabry-Perot Interferometers (FPI). Each FPI is made of a single piece of L-BBH2 glass which has a high index of refraction n 2.07. Each is then coated with partially reflective mirrors to achieve a spectral resolution of R 30,000. Running the FPIs in tandem reduces the overlapping orders and allows for a much wider free spectral range and higher contrast. Tuning of the FPIs is achieved by adjusting the temperature and thus changing the FPI gap and the refractive index of the material. The spectrometer then moves spatially in order to get spectral information at every point in the field of view. We select spectral lines for further analysis and create maps of the line depths across the field. Using this technique we are able to measure the fluorescence of chlorophyll in plants and observe zodiacal light. In the chlorophyll analysis we are able to detect chlorophyll fluorescence using the line depth in a plant using the sky as a reference solar spectrum. This instrument has possible applications in either a cubesat or aerial observations to measure bulk plant activity over large areas.

The Effect of a Pulsed Interference Signal on an Adaptive Array.

DTIC Science & Technology

1981-04-01

eigenvectors exist.) Using a spectral decomp- osition formula [10,11], we may write e-kM in the form -kM -k(T- )-kpo 3 -kg i (e -k = e a : .iZ e eie i , (28...N 0 (No/T b) In addition, for this analysis we shall assume the interference power at the array output has the same effect on detector performance... Sensitive Adaptive Array," to appear in IEEE Trans. Antennas and Propagation. 7. R.T. Compton, Jr., "The Tripole Antenna - An Adaptive Array with Full

Terrestrial solar spectral modeling. [SOLTRAN, BRITE, and FLASH codes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bird, R.E.

The utility of accurate computer codes for calculating the solar spectral irradiance under various atmospheric conditions was recognized. New absorption and extraterrestrial spectral data are introduced. Progress is made in radiative transfer modeling outside of the solar community, especially for space and military applications. Three rigorous radiative transfer codes SOLTRAN, BRITE, and FLASH are employed. The SOLTRAN and BRITE codes are described and results from their use are presented.

3D Cloud Tomography, Followed by Mean Optical and Microphysical Properties, with Multi-Angle/Multi-Pixel Data

NASA Astrophysics Data System (ADS)

Davis, A. B.; von Allmen, P. A.; Marshak, A.; Bal, G.

2010-12-01

The geometrical assumption in all operational cloud remote sensing algorithms is that clouds are plane-parallel slabs, which applies relatively well to the most uniform stratus layers. Its benefit is to justify using classic 1D radiative transfer (RT) theory, where angular details (solar, viewing, azimuthal) are fully accounted for and precise phase functions can be used, to generate the look-up tables used in the retrievals. Unsurprisingly, these algorithms catastrophically fail when applied to cumulus-type clouds, which are highly 3D. This is unfortunate for the cloud-process modeling community that may thrive on in situ airborne data, but would very much like to use satellite data for more than illustrations in their presentations and publications. So, how can we obtain quantitative information from space-based observations of finite aspect ratio clouds? Cloud base/top heights, vertically projected area, mean liquid water content (LWC), and volume-averaged droplet size would be a good start. Motivated by this science need, we present a new approach suitable for sparse cumulus fields where we turn the tables on the standard procedure in cloud remote sensing. We make no a priori assumption about cloud shape, save an approximately flat base, but use brutal approximations about the RT that is necessarily 3D. Indeed, the first order of business is to roughly determine the cloud's outer shape in one of two ways, which we will frame as competing initial guesses for the next phase of shape refinement and volume-averaged microphysical parameter estimation. Both steps use multi-pixel/multi-angle techniques amenable to MISR data, the latter adding a bi-spectral dimension using collocated MODIS data. One approach to rough cloud shape determination is to fit the multi-pixel/multi-angle data with a geometric primitive such as a scalene hemi-ellipsoid with 7 parameters (translation in 3D space, 3 semi-axes, 1 azimuthal orientation); for the radiometry, a simple radiosity-type model is used where the cloud surface "emits" either reflected (sunny-side) or transmitted (shady-side) light at different levels. As it turns out, the reflected/transmitted light ratio yields an approximate cloud optical thickness. Another approach is to invoke tomography techniques to define the volume occupied by the cloud using, as it were, cloud masks for each direction of observation. In the shape and opacity refinement phase, initial guesses along with solar and viewing geometry information are used to predict radiance in each pixel using a fast diffusion model for the 3D RT in MISR's non-absorbing red channel (275 m resolution). Refinement is constrained and stopped when optimal resolution is reached. Finally, multi-pixel/mono-angle MODIS data for the same cloud (at comparable 250 m resolution) reveals the desired droplet size information, hence the volume-averaged LWC. This is an ambitious remote sensing science project drawing on cross-disciplinary expertise gained in medical imaging using both X-ray and near-IR sources and detectors. It is high risk but with potentially high returns not only for the cloud modeling community but also aerosol and surface characterization in the presence of broken 3D clouds.

AIS radiometry and the problem of contamination from mixed spectral orders

NASA Technical Reports Server (NTRS)

Conel, J. E.; Adams, S.; Alley, R. E.; Hoover, G.; Schultz, S.

1988-01-01

The spectral radiance of test areas under solar illumination is ascertained in view of Airborne Imaging Spectrometer (AIS) data from Mono Lake, CA, establishing an atmospheric correction method for major absorbers on the basis of the spectrometric data themselves. The apparent low contrast of all atmospheric absorption bands leads to a study of contamination from overlapping spectral orders in the AIS data; this contamination is found unambiguously above 1500 nm with a magnitude that is a factor of 1.5-2.0 greater than the expected uncontaminated signal alone.

Solid state linear dichroic infrared spectral analysis of benzimidazoles and their N 1-protonated salts

NASA Astrophysics Data System (ADS)

Ivanova, B. B.

2005-11-01

A stereo structural characterization of 2,5,6-thrimethylbenzimidazole (MBIZ) and 2-amino-benzimidaziole (2-NH 2-BI) and their N 1 protonation salts was carried out using a polarized solid state linear dichroic infrared spectral (IR-LD) analysis in nematic liquid crystal suspension. All experimental predicted structures were compared with the theoretical ones, obtained by ab initio calculations. The Cs to C2v* symmetry transformation as a result of protonation processes, with a view of its reflection on the infrared spectral characteristics was described.

Spectral statistics of the uni-modular ensemble

NASA Astrophysics Data System (ADS)

Joyner, Christopher H.; Smilansky, Uzy; Weidenmüller, Hans A.

2017-09-01

We investigate the spectral statistics of Hermitian matrices in which the elements are chosen uniformly from U(1) , called the uni-modular ensemble (UME), in the limit of large matrix size. Using three complimentary methods; a supersymmetric integration method, a combinatorial graph-theoretical analysis and a Brownian motion approach, we are able to derive expressions for 1 / N corrections to the mean spectral moments and also analyse the fluctuations about this mean. By addressing the same ensemble from three different point of view, we can critically compare their relative advantages and derive some new results.

Image science team

NASA Technical Reports Server (NTRS)

Ando, K.

1982-01-01

A substantial technology base of solid state pushbroom sensors exists and is in the process of further evolution at both GSFC and JPL. Technologies being developed relate to short wave infrared (SWIR) detector arrays; HgCdTe hybrid detector arrays; InSb linear and area arrays; passive coolers; spectral beam splitters; the deposition of spectral filters on detector arrays; and the functional design of the shuttle/space platform imaging spectrometer (SIS) system. Spatial and spectral characteristics of field, aircraft and space multispectral sensors are summaried. The status, field of view, and resolution of foreign land observing systems are included.

CHOROIDAL THICKNESS CHANGES IN PROLIFERATIVE DIABETIC RETINOPATHY TREATED WITH PANRETINAL PHOTOCOAGULATION VERSUS PANRETINAL PHOTOCOAGULATION WITH INTRAVITREAL BEVACIZUMAB.

PubMed

Roohipoor, Ramak; Sharifian, Elaheh; Ghassemi, Fariba; Riazi-Esfahani, Mohammad; Karkhaneh, Reza; Fard, Masoud Aghsaei; Zarei, Mohammad; Modjtahedi, Bobeck S; Moghimi, Sasan

2016-10-01

To compare choroidal thickness (CT) and retinal thickness (RT) between eyes with proliferative diabetic retinopathy treated with panretinal photocoagulation (PRP) or PRP with intravitreal bevacizumab (PRP + IVB). Thirty-three patients with proliferative diabetic retinopathy were randomized to have one eye treated with PRP and the other with PRP + IVB. Change in CT was compared with baseline using enhanced depth imaging-optical coherence tomography at baseline and Months 1, 3, 6, and 10 after treatment. Change in RT was similarly assessed using spectral domain optical coherence tomography. Changes in both CT and RT were assessed in all nine macular areas as defined by Early Treatment Diabetic Retinopathy Study subfields. The PRP + IVB group had a significant decrease in subfoveal CT at 3 and 10 months (323.9 ± 62 μm at baseline vs. 320.7 ± 64.8 μm at Month 3 [P = 0.024] and 304.7 ± 65.6 μm at Month 10 [P = 0.003]). Subfoveal CT significantly decreased at 10 months compared with baseline in the PRP group (320.8 ± 57.7 at baseline to 297 ± 66.3 μm at 10 months, P = 0.01). Subfoveal CT was not significantly different between the 2 groups at 10 months. The best-corrected visual acuity did not change after treatment in the two groups, and there was no correlation between BCVA and CT changes (r = 0.222, P = 0.37 in the PRP group and r = 0.387, P = 0.12 in the PRP + IVB group). Significant increases in RT were seen in the PRP + IVB group at 6 months and in the PRP group at Months 1, 3, 6, and 10. A correlation between changes in CT and RT was only seen in the PRP group at 10 months after treatment. Eyes with proliferative diabetic retinopathy treated with PRP + IVB and PRP both had significant reduction in CT at 10 months; however, the eyes that were also treated with IVB also underwent an earlier but transient reduction at 3 months. Patients treated with IVB underwent less increase in RT.

DISTANT VIEW, UTILITY BUILDING "B" (EAST SIDE) ON LEFT AND ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

DISTANT VIEW, UTILITY BUILDING "B" (EAST SIDE) ON LEFT AND AUTOMOTIVE REPAIR SHOP (EAST AND SOUTH SIDES) ON RIGHT, GASOLINE AND OIL HOUSE VISIBLE IN FAR DISTANCE. VIEW TO NORTHWEST. - Cedar City Automotive Repair Shop, 820 North Main Street, Cedar City, Iron County, UT

A semi-automatic method for left ventricle volume estimate: an in vivo validation study

NASA Technical Reports Server (NTRS)

Corsi, C.; Lamberti, C.; Sarti, A.; Saracino, G.; Shiota, T.; Thomas, J. D.

2001-01-01

This study aims to the validation of the left ventricular (LV) volume estimates obtained by processing volumetric data utilizing a segmentation model based on level set technique. The validation has been performed by comparing real-time volumetric echo data (RT3DE) and magnetic resonance (MRI) data. A validation protocol has been defined. The validation protocol was applied to twenty-four estimates (range 61-467 ml) obtained from normal and pathologic subjects, which underwent both RT3DE and MRI. A statistical analysis was performed on each estimate and on clinical parameters as stroke volume (SV) and ejection fraction (EF). Assuming MRI estimates (x) as a reference, an excellent correlation was found with volume measured by utilizing the segmentation procedure (y) (y=0.89x + 13.78, r=0.98). The mean error on SV was 8 ml and the mean error on EF was 2%. This study demonstrated that the segmentation technique is reliably applicable on human hearts in clinical practice.

Tumour and normal tissue radiobiology in mouse models: how close are mice to mini-humans?

PubMed

Koontz, Bridget F; Verhaegen, Frank; De Ruysscher, Dirk

2017-01-01

Animal modelling is essential to the study of radiobiology and the advancement of clinical radiation oncology by providing preclinical data. Mouse models in particular have been highly utilized in the study of both tumour and normal tissue radiobiology because of their cost effectiveness and versatility. Technology has significantly advanced in preclinical radiation techniques to allow highly conformal image-guided irradiation of small animals in an effort to mimic human treatment capabilities. However, the biological and physical limitations of animal modelling should be recognized and considered when interpreting preclinical radiotherapy (RT) studies. Murine tumour and normal tissue radioresponse has been shown to vary from human cellular and molecular pathways. Small animal irradiation techniques utilize different anatomical boundaries and may have different physical properties than human RT. This review addresses the difference between the human condition and mouse models and discusses possible strategies for future refinement of murine models of cancer and radiation for the benefit of both basic radiobiology and clinical translation.

Tumour and normal tissue radiobiology in mouse models: how close are mice to mini-humans?

PubMed Central

Verhaegen, Frank; De Ruysscher, Dirk

2017-01-01

Animal modelling is essential to the study of radiobiology and the advancement of clinical radiation oncology by providing preclinical data. Mouse models in particular have been highly utilized in the study of both tumour and normal tissue radiobiology because of their cost effectiveness and versatility. Technology has significantly advanced in preclinical radiation techniques to allow highly conformal image-guided irradiation of small animals in an effort to mimic human treatment capabilities. However, the biological and physical limitations of animal modelling should be recognized and considered when interpreting preclinical radiotherapy (RT) studies. Murine tumour and normal tissue radioresponse has been shown to vary from human cellular and molecular pathways. Small animal irradiation techniques utilize different anatomical boundaries and may have different physical properties than human RT. This review addresses the difference between the human condition and mouse models and discusses possible strategies for future refinement of murine models of cancer and radiation for the benefit of both basic radiobiology and clinical translation. PMID:27612010

IFLA General Conference, 1991. Workshops' Papers: Section of Geography and Map Libraries; Section of Art Libraries; Section of Children's Libraries joint with RT of Research in Reading; Children's Literature Documentation Centres (RT); Section of Libraries for the Blind joint with Section of Interlending and Document Delivery; Section of Government Information and Official Publications; Section of Information Technology; Professional Board Working Group on Management. Booklet 9.

ERIC Educational Resources Information Center

International Federation of Library Associations and Institutions, The Hague (Netherlands).

The 29 papers in this collection were presented at 9 conference workshops: "Inset Maps and Proposals for Their Description" (V. Kusov); "The Utilization of the Old Maps in Modern Researches" (H. Melnikova); (3) "New Series of Maps for Higher Schools: Their Role in the Cartographic Provision for the Higher Education"…

Spectral diffraction efficiency characterization of broadband diffractive optical elements.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Choi, Junoh; Cruz-Cabrera, Alvaro Augusto; Tanbakuchi, Anthony

Diffractive optical elements, with their thin profile and unique dispersion properties, have been studied and utilized in a number of optical systems, often yielding smaller and lighter systems. Despite the interest in and study of diffractive elements, the application has been limited to narrow spectral bands. This is due to the etch depths, which are optimized for optical path differences of only a single wavelength, consequently leading to rapid decline in efficiency as the working wavelength shifts away from the design wavelength. Various broadband diffractive design methodologies have recently been developed that improve spectral diffraction efficiency and expand the workingmore » bandwidth of diffractive elements. We have developed diffraction efficiency models and utilized the models to design, fabricate, and test two such extended bandwidth diffractive designs.« less

Terabit optical OFDM superchannel transmission via coherent carriers of a hybrid chip-scale soliton frequency comb

NASA Astrophysics Data System (ADS)

Geng, Yong; Huang, Xiatao; Cui, Wenwen; Ling, Yun; Xu, Bo; Zhang, Jin; Yi, Xingwen; Wu, Baojian; Huang, Shu-Wei; Qiu, Kun; Wong, Chee Wei; Zhou, Heng

2018-05-01

We demonstrate seamless channel multiplexing and high bitrate superchannel transmission of coherent optical orthogonal-frequency-division-multiplexing (CO-OFDM) data signals utilizing a dissipative Kerr soliton (DKS) frequency comb generated in an on-chip microcavity. Aided by comb line multiplication through Nyquist pulse modulation, the high stability and mutual coherence among mode-locked Kerr comb lines are exploited for the first time to eliminate the guard intervals between communication channels and achieve full spectral density bandwidth utilization. Spectral efficiency as high as 2.625 bit/Hz/s is obtained for 180 CO-OFDM bands encoded with 12.75 Gbaud 8-QAM data, adding up to total bitrate of 6.885 Tb/s within 2.295 THz frequency comb bandwidth. Our study confirms that high coherence is the key superiority of Kerr soliton frequency combs over independent laser diodes, as a multi-spectral coherent laser source for high-bandwidth high-spectral-density transmission networks.

MO-E-BRC-01: Online Adaptive MR-Guided RT: Workflow and Clinical Implementation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kashani, R.

Online adaptive radiation therapy has the potential to ensure delivery of optimal treatment to the patient by accounting for anatomical and potentially functional changes that occur from one fraction to the next and over the course of treatment. While on-line adaptive RT (ART) has been a topic of many publications, discussions, and research, it has until very recently remained largely a concept and not a practical implementation. However, recent advances in on-table imaging, use of deformable image registration for contour generation and dose tracking, faster and more efficient plan optimization, as well as fast quality assurance method has enabled themore » implementation of ART in the clinic in the past couple of years. The introduction of these tools into routine clinical use requires many considerations and progressive knowledge to understand how processes that have historically taken hours/days to complete can now be done in less than 30 minutes. This session will discuss considerations to perform real time contouring, planning and patient specific QA, as well as a practical workflow and the required resources. Learning Objectives: To understand the difficulties, challenges and available technologies for online adaptive RT. To understand how to implement online adaptive therapy in a clinical environment and to understand the workflow and resources required. To understand the limitations and sources of uncertainty in the online adaptive process I have research funding from ViewRay Inc. and Philips Medical Systems.; R. Kashani, I have research funding from ViewRay Inc. and Philips Medical Systems.; X. Li, Research supported by Elekta Inc.« less

Doppler imaging using spectrally-encoded endoscopy

PubMed Central

Yelin, Dvir; Bouma, B. E.; Rosowsky, J. J.; Tearney, G. J.

2009-01-01

The capability to image tissue motion such as blood flow through an endoscope could have many applications in medicine. Spectrally encoded endoscopy (SEE) is a recently introduced technique that utilizes a single optical fiber and miniature diffractive optics to obtain endoscopic images through small diameter probes. Using spectral-domain interferometry, SEE is furthermore capable of three-dimensional volume imaging at video rates. Here we show that by measuring relative spectral phases, this technology can additionally measure Doppler shifts. Doppler SEE is demonstrated in flowing Intralipid phantoms and vibrating middle ear ossicles. PMID:18795020

Bloodstain detection and discrimination impacted by spectral shift when using an interference filter-based visible and near-infrared multispectral crime scene imaging system

NASA Astrophysics Data System (ADS)

Yang, Jie; Messinger, David W.; Dube, Roger R.

2018-03-01

Bloodstain detection and discrimination from nonblood substances on various substrates are critical in forensic science as bloodstains are a critical source for confirmatory DNA tests. Conventional bloodstain detection methods often involve time-consuming sample preparation, a chance of harm to investigators, the possibility of destruction of blood samples, and acquisition of too little data at crime scenes either in the field or in the laboratory. An imaging method has the advantages of being nondestructive, noncontact, real-time, and covering a large field-of-view. The abundant spectral information provided by multispectral imaging makes it a potential presumptive bloodstain detection and discrimination method. This article proposes an interference filter (IF) based area scanning three-spectral-band crime scene imaging system used for forensic bloodstain detection and discrimination. The impact of large angle of views on the spectral shift of calibrated IFs is determined, for both detecting and discriminating bloodstains from visually similar substances on multiple substrates. Spectral features in the visible and near-infrared portion employed by the relative band depth method are used. This study shows that 1 ml bloodstain on black felt, gray felt, red felt, white cotton, white polyester, and raw wood can be detected. Bloodstains on the above substrates can be discriminated from cola, coffee, ketchup, orange juice, red wine, and green tea.

Multispectral Resampling of Seagrass Species Spectra: WorldView-2, Quickbird, Sentinel-2A, ASTER VNIR, and Landsat 8 OLI

NASA Astrophysics Data System (ADS)

Wicaksono, Pramaditya; Salivian Wisnu Kumara, Ignatius; Kamal, Muhammad; Afif Fauzan, Muhammad; Zhafarina, Zhafirah; Agus Nurswantoro, Dwi; Noviaris Yogyantoro, Rifka

2017-12-01

Although spectrally different, seagrass species may not be able to be mapped from multispectral remote sensing images due to the limitation of their spectral resolution. Therefore, it is important to quantitatively assess the possibility of mapping seagrass species using multispectral images by resampling seagrass species spectra to multispectral bands. Seagrass species spectra were measured on harvested seagrass leaves. Spectral resolution of multispectral images used in this research was adopted from WorldView-2, Quickbird, Sentinel-2A, ASTER VNIR, and Landsat 8 OLI. These images are widely available and can be a good representative and baseline for previous or future remote sensing images. Seagrass species considered in this research are Enhalus acoroides (Ea), Thalassodendron ciliatum (Tc), Thalassia hemprichii (Th), Cymodocea rotundata (Cr), Cymodocea serrulata (Cs), Halodule uninervis (Hu), Halodule pinifolia (Hp), Syringodum isoetifolium (Si), Halophila ovalis (Ho), and Halophila minor (Hm). Multispectral resampling analysis indicate that the resampled spectra exhibit similar shape and pattern with the original spectra but less precise, and they lose the unique absorption feature of seagrass species. Relying on spectral bands alone, multispectral image is not effective in mapping these seagrass species individually, which is shown by the poor and inconsistent result of Spectral Angle Mapper (SAM) classification technique in classifying seagrass species using seagrass species spectra as pure endmember. Only Sentinel-2A produced acceptable classification result using SAM.

AirMSPI Level 1B2 V005 New Data for NASA’s SEAC4RS Campaign

Atmospheric Science Data Center

2018-05-07

AirMSPI Level 1B2 V005 New Data for NASA’s SEAC4RS Campaign Wednesday, February 14, 2018 ... 865, and 935 nm. The data products include radiance, time, solar zenith, solar azimuth, view zenith, and view azimuth for all spectral ...

Rehabilitation technology services and employment outcomes among consumers using division of rehabilitation services.

PubMed

Sprong, Matthew Evan; Dallas, Bryan; Paul, Erina; Xia, Michelle

2018-05-03

The primary goal of the study was to evaluate how the use of rehabilitation technology impacted closure status for consumers receiving services in fiscal year (FY) 2014. Rehabilitation Service Administration (RSA-911) Case Service Report FY 2014 archival dataset was obtained from the U.S. Department of Education (2014) and secondary analyses was performed for this study. RSA-911 archival data is updated on an annual basis and consists of all state-federal rehabilitation consumers who were served in the specific fiscal year. The dataset contains information related to each consumer's demographic information (e.g. age, gender, race) and other supplemental information (e.g. weekly earnings at closure, cause of disability, services provided). A multiple logistic regression analysis was utilized and revealed that white consumers receiving rehabilitation technology (RT) services have significantly higher closure rate than consumers of other races, RT services differ by the employment status at application, RT services differ by the type of disability, educational level at application for people receiving RT services did predict closure status (i.e. exiting with an employment outcome), IEP status did not predict closure status, weekly earnings at application did predict closure status and the interaction effect between IEP and RT services is statistically significant. The odds ratio (ORs) were presented at the 95% confidence interval (CI). Vocational rehabilitation counselors needs training to correctly identify appropriate RT services for consumers, so that the likelihood of exiting with an employment outcome is obtained. Implications for Rehabilitation RT services significantly improved their chances of successful employment compared to those who did not receive RT services. Education at closure would also have some significant impact on employment outcomes. Training in Assistive Technology (AT) for Vocational Rehabilitation counselors will assist in the proper identification of AT requirements, which may lead to a higher likelihood of consumers exiting with an employment outcome.

Moving from Batch to Field Using the RT3D Reactive Transport Modeling System

NASA Astrophysics Data System (ADS)

Clement, T. P.; Gautam, T. R.

2002-12-01

The public domain reactive transport code RT3D (Clement, 1997) is a general-purpose numerical code for solving coupled, multi-species reactive transport in saturated groundwater systems. The code uses MODFLOW to simulate flow and several modules of MT3DMS to simulate the advection and dispersion processes. RT3D employs the operator-split strategy which allows the code solve the coupled reactive transport problem in a modular fashion. The coupling between reaction and transport is defined through a separate module where the reaction equations are specified. The code supports a versatile user-defined reaction option that allows users to define their own reaction system through a Fortran-90 subroutine, known as the RT3D-reaction package. Further a utility code, known as BATCHRXN, allows the users to independently test and debug their reaction package. To analyze a new reaction system at a batch scale, users should first run BATCHRXN to test the ability of their reaction package to model the batch data. After testing, the reaction package can simply be ported to the RT3D environment to study the model response under 1-, 2-, or 3-dimensional transport conditions. This paper presents example problems that demonstrate the methods for moving from batch to field-scale simulations using BATCHRXN and RT3D codes. The first example describes a simple first-order reaction system for simulating the sequential degradation of Tetrachloroethene (PCE) and its daughter products. The second example uses a relatively complex reaction system for describing the multiple degradation pathways of Tetrachloroethane (PCA) and its daughter products. References 1) Clement, T.P, RT3D - A modular computer code for simulating reactive multi-species transport in 3-Dimensional groundwater aquifers, Battelle Pacific Northwest National Laboratory Research Report, PNNL-SA-28967, September, 1997. Available at: http://bioprocess.pnl.gov/rt3d.htm.

Three-dimensional echocardiography in various types of heart disease: a comparison study of magnetic resonance imaging and 64-slice computed tomography in a real-world population.

PubMed

Squeri, Angelo; Censi, Stefano; Reverberi, Claudio; Gaibazzi, Nicola; Baldelli, Marco; Binno, Simone Maurizio; Properzi, Enrico; Bosi, Stefano

2017-03-01

Accurate quantification of left ventricular (LV) volumes [end-diastolic volume (EDV) and end-systolic volume (ESV)] and ejection fraction (EF) is of critical importance. The development of real-time three-dimensional echocardiography (RT3DE) has shown better correlation than two-dimensional (2D) echocardiography with magnetic resonance imaging (MRI) measurements. The aim of our study was to assess the accuracy of RT3DE and 64-slice computed tomography (CT) in the evaluation of LV volumes and function using MRI as the reference standard in a real-world population with various types of heart disease with different chamber geometry. The study population consisted of 66 patients referred for cardiac MRI for various pathologies. All patients underwent cardiac MRI, and RT3DE and 64 slices CT were then performed on a subsequent day. The study population was then divided into 5 clinical groups depending on the underlying heart disease. RT3DE volumes correlated well with MRI values (R 2 values: 0.90 for EDV and 0.94 for ESV). RT3DE measurements of EF correlated well with MRI values (R 2  = 0.86). RT3DE measurements resulted in slightly underestimated values of both EDV and ESV, as reflected by biases of -9.18 and -4.50 mL, respectively. Comparison of RT3DE and MRI in various types of cardiomyopathies showed no statistical difference between different LV geometrical patterns. These results confirm that RT3DE has good accuracy in everyday clinical practice and can be of clinical utility in all types of cardiomyopathy independently of LV geometric pattern, LV diameter or wall thickness, taking into account a slight underestimation of LV volumes and EF compared to MRI.

A multispectral, high-speed, low-cost device in the UV-MWIR spectral range

NASA Astrophysics Data System (ADS)

Svensson, Thomas; Lindell, Roland; Carlsson, Leif

2011-10-01

This paper presents the design and performance of a multispectral, high-speed, low-cost device. It is composed of six separate single element detectors covering the spectral range from UV to MWIR. Due to the wide spectral ranges of the detectors, these are used in conjunction with spectral filters. The device is a tool to spectrally and temporally resolve large field of view angularly integrated signatures from very fast events and get a total amplitude measure. One application has been to determine the maximal amplitude signal in muzzle flashes. Since the pulse width of a muzzle flash is on the order of 1 ms, a sensor with a bandwidth significantly higher than 1000 Hz is needed to resolve the flash. Examples from experimental trials are given.

The LOFT Mission Concept - A Status Update

NASA Technical Reports Server (NTRS)

Feroci, M.; Bozzo, E.; Brandt, S.; Hernanz, M.; van Der Klis, M.; Liu , L. -P.; Orleanski, P.; Pohl, M.; Santangelo, A.; Schanne, S.;

Spectral Radiance of a Large-Area Integrating Sphere Source

PubMed Central

Walker, James H.; Thompson, Ambler

1995-01-01

The radiance and irradiance calibration of large field-of-view scanning and imaging radiometers for remote sensing and surveillance applications has resulted in the development of novel calibration techniques. One of these techniques is the employment of large-area integrating sphere sources as radiance or irradiance secondary standards. To assist the National Aeronautical and Space Administration’s space based ozone measurement program, a commercially available large-area internally illuminated integrating sphere source’s spectral radiance was characterized in the wavelength region from 230 nm to 400 nm at the National Institute of Standards and Technology. Spectral radiance determinations and spatial mappings of the source indicate that carefully designed large-area integrating sphere sources can be measured with a 1 % to 2 % expanded uncertainty (two standard deviation estimate) in the near ultraviolet with spatial nonuniformities of 0.6 % or smaller across a 20 cm diameter exit aperture. A method is proposed for the calculation of the final radiance uncertainties of the source which includes the field of view of the instrument being calibrated. PMID:29151725

Dome Degradation Characterization of Wide-Field-of-View Nonscanner Aboard ERBE and Its Reprocessing

NASA Technical Reports Server (NTRS)

Shrestha, Alok K.; Kato, Seiji; Wong, Takmeng; Su, Wenying; Stackhouse, Paul W., Jr.; Rose, Fred; Miller, Walter F.; Bush, Kathryn; Rutan, David A.; Minnis, Patrick;

Saturn ring spokes: an overview of their near-infrared spectral properties from Cassini/VIMS data

NASA Astrophysics Data System (ADS)

D'Aversa, E.; Bellucci, G.; Nicholson, P. D.; Brown, R. H.; Altieri, F.; Carrozzo, F. G.

2013-09-01

The B ring of Saturn is known to periodically host weak elongated features called spokes. They have been clearly detected by the Voyagers, by the Hubble Space Telescope and by Cassini instruments ISS and VIMS. These observations were conducted during three different Saturn equinoxes in 1980, 1995, and 2009 respectively, bringing to the current view of the spoke's physical nature: thin clouds of fine electrically-charged grains levitating over the larger ring boulders. In respect to the previous available datasets, the VIMS one has widened our view of spokes outside the visible spectral range for the first time (longward of 1 micron). On the other hand, the VIMS spatial resolution is often comparable with the typical sizes of spokes, and considerable image processing is needed in order to enhance the spoke images and for the spectra extraction. Here we will report about advances in the spoke spectral analysis with VIMS data and will discuss the possible physical interpretations under the assumption of low spoke optical thickness.

Software development for the analysis of heartbeat sounds with LabVIEW in diagnosis of cardiovascular disease.

PubMed

Topal, Taner; Polat, Hüseyin; Güler, Inan

2008-10-01

In this paper, a time-frequency spectral analysis software (Heart Sound Analyzer) for the computer-aided analysis of cardiac sounds has been developed with LabVIEW. Software modules reveal important information for cardiovascular disorders, it can also assist to general physicians to come up with more accurate and reliable diagnosis at early stages. Heart sound analyzer (HSA) software can overcome the deficiency of expert doctors and help them in rural as well as urban clinics and hospitals. HSA has two main blocks: data acquisition and preprocessing, time-frequency spectral analyses. The heart sounds are first acquired using a modified stethoscope which has an electret microphone in it. Then, the signals are analysed using the time-frequency/scale spectral analysis techniques such as STFT, Wigner-Ville distribution and wavelet transforms. HSA modules have been tested with real heart sounds from 35 volunteers and proved to be quite efficient and robust while dealing with a large variety of pathological conditions.

The Athena X-ray Integral Field Unit (X-IFU)

NASA Technical Reports Server (NTRS)

Barret, Didier; Trong, Thein Lam; Den Herder, Jan-Willem; Piro, Luigi; Barcons, Xavier; Huovelin, Juhani; Kelley, Richard; Mas-Hesse, J. Miquel; Mitsuda, Kazuhisa; Paltani, Stephane;

Design of a grazing incidence EUV imaging spectrometer for the solar orbiter ESA mission

NASA Astrophysics Data System (ADS)

Da Deppo, Vania; Poletto, Luca

2017-11-01

The paper describes the optical design and performance of an extreme-ultraviolet (EUV) spectrometer for imaging spectroscopy to be part of the scientific payload of the Solar Orbiter (SOLO) mission. The main scientific objectives are to study the solar polar region and observe in detail the evolution of corona structures from a favourable point of view at only 45 solar radii from the Sun (0.2 AU). The instrument concept is based on a grazing incidence telescope, (1200 m focal length, 18 arcmin x 18 arcmin FoV), in Wolter configuration couple to a normalincidence VLS grating spectrometer, which preserve the stigmaticity in an extended spectral region and in the whole field-of-view. The spectral range covered by the instrument is the 116-126 nm region at the first order and the 57-63 nm region at the second order. The spectral resolving element is 65 mÅ (I order), corresponding to a velocity resolution of 16 km/s.

VIEW OF UTILITY ROOM, SHOWING ORIGINAL REAR DOOR WITH GLASS ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

VIEW OF UTILITY ROOM, SHOWING ORIGINAL REAR DOOR WITH GLASS JALOUSIES. VIEW FACING SOUTHWEST - Camp H.M. Smith and Navy Public Works Center Manana Title VII (Capehart) Housing, Three-Bedroom Single-Family Type 9, Birch Circle, Elm Drive, Elm Circle, and Date Drive, Pearl City, Honolulu County, HI

Optical properties of β-BBO and potential for THz applications

NASA Astrophysics Data System (ADS)

Nikolaev, N. A.; Andreev, Yu. M.; Antsygin, V. D.; Bekker, T. B.; Ezhov, D. M.; Kokh, A. E.; Kokh, K. A.; Lanskii, G. V.; Mamrashev, A. A.; Svetlichnyi, V. A.

2018-01-01

The anisotropy of optical properties of high quality beta barium borate crystal (β-BaB2O4, β-BBO) was studied in the main transparency window by using classic spectroscopic methods and in the range of 0.2 - 2 THz by using THz time-domain spectroscopy. β-BBO crystals were grown by the top-seeded solution technique in a highly resistive furnace with a heat field of 3-fold axis symmetry. At room temperature (RT), absorption coefficient in the maximal transparency window in grown crystals did not exceed 0.05 cm-1. Strong absorption anisotropy was observed in 3 - 5 μm and the THz range. At 1 THz absorption coefficients for e and o wave were, respectively, 7 cm-1 and 21 cm-1 at RT; 2 cm-1 and 10 cm-1 at 81 K. At the most attractive for out-of-door applications range < 0.4 THz the absorption coefficient is found to be very low: below 0.2 cm-1 at RT and 1 cm-1 at 81 K. Refractive indices dispersions measured by THz-TDS were approximated in the form of Sellmeier equations. Birefringence is found quite large for phase matched difference frequency generation (DFG) or down-conversion into the THz range (THz-DFG) under near IR pump at RT and 81 K. Type II (oe-o and eo-o), and type I (ee-e) three wave interactions can be realized at RT. THz-DFG of Nd:YAG laser and KTP OPO can be realized by type II (oe-o) three-wave interaction. For selected spectral ranges of femtosecond Ti:Sapphire laser efficient phase matched and group velocity matched optical rectification can be realized by another two types of three wave interactions. Accounting other well-known attractive physical properties of β-BBO crystal, wide application in THz technique can be forecasted.

Clinical utility of RT-PCR in assessing HER 2 gene expression versus traditional IHC and FISH in breast cancer patients.

PubMed

Suryavanshi, Moushumi; Mehta, Anurag; Jaipuria, Jiten; Kumar, Dushyant; Vishwakarma, Gayatri; Panigrahi, Manoj Kumar; Verma, Haristuti; Saifi, Mumtaz; Sharma, Sanjeev; Tandon, Simran; Doval, D C; Das, Bhudev C

2018-02-09

IHC and FISH are used for categorizing HER 2 status in breast cancer at the protein and DNA level, respectively. HER 2 expression at the RNA level is quantitative, cheaper, easier to standardize and free from interobserver variation. 115 consecutive patients were tested by IHC, FISH and RT-PCR (test cohort). Assuming FISH result to be the response variable, ROC curves for RT-PCR ratio were analyzed to label HER 2 negative, equivocal and positive cases as RT-PCR score 1, 2 and 3, respectively. Inter-relationships between RT-PCR, IHC and FISH were defined. 'Clinical benefit' of a test was defined as proportion of patients labeled unequivocally as HER 2 positive or negative. Population for 1 year was simulated constraint to previous reports of HER 2 positivity and IHC category distribution by a meta-analysis of previous studies that evaluated concordance between IHC and FISH to determine HER 2 status (simulation cohort). Four diagnostic pathways in the simulation cohort were defined-(1) initial IHC, followed by FISH (conventional pathway); (2) initial RT-PCR, followed by FISH; (3) initial IHC, followed by RT-PCR and then by FISH; (4) initial RT-PCR, followed by IHC and then by FISH. The clinical benefit of IHC and RT-PCR in the four pathways was analyzed and sensitivity analysis for incremental cost-effectiveness ratio and cost-benefit comapring RT-PCR against IHC, both as first-line tests and among those with IHC score 2 as a reflex second-line test was performed by the Monte Carlo technique. 115 patients comprised the study population. While none with IHC score of 0 or 1 was FISH positive for HER 2, all cases with IHC score of 3 were FISH positive. 43 cases were assigned IHC score of 2. Thus, 72 patients benefited from the initial IHC testing [clinical benefit 62.6%], with the overall concordance between IHC and FISH being 100% for those with IHC score of 0, 1 and 3 (conclusive IHC categories). For RT-PCR with 100% concordance, 15.7% (115-97 = 18) patients would have benefited from RT-PCR testing if it was used as a first-line test. If RT-PCR would have been used as a second-line test among those with IHC score 2 (n = 43), then only 6 patients would have been assigned a conclusive RT-PCR category (category 1 or 3) translating to a clinical benefit of 14% (6/43) as a second-line test. As a second-line test it had 51% probability to prove more cost-effective than the conventional pathway, provided the cost of RT-PCR was 0.4 times the cost of IHC. Also in a three-step pathway, RT-PCR upfront would have 56% probability of higher cost-benefit provided the cost of RT-PCR was 0.1 times the cost of IHC. RT-PCR results were found to be suboptimal to IHC in terms of discriminative ability and clinical benefit; thus, it is unlikely to replace IHC as a first-line test in the near future.

Development of a SYBR green I based RT-PCR assay for yellow fever virus: application in assessment of YFV infection in Aedes aegypti.

PubMed

Dash, Paban Kumar; Boutonnier, Alain; Prina, Eric; Sharma, Shashi; Reiter, Paul

2012-01-22

Yellow Fever virus (YFV) is an important arboviral pathogen in much of sub-Saharan Africa and the tropical Americas. It is the prototype member of the genus Flavivirus and is transmitted primarily by Aedes (Stegomyia) mosquitoes. The incidence of human infections in endemic areas has risen in recent years. Prompt and dependable identification of YFV is a critical component of response to suspect cases. We developed a one-step SYBR Green I-based real-time quantitative RT-PCR (qRT-PCR) assay targeting the 5'NTR and capsid-gene junction--for rapid detection and quantification of YFV. The detection limit was 1 PFU/mL, 10-fold more sensitive than conventional RT-PCR, and there was no cross-reactivity with closely related flaviviruses or with alphaviruses. Viral load in samples was determined by standard curve plotted from cycle threshold (Ct) values and virus concentration. The efficacy of the assay in mosquitoes was assessed with spiked samples. The utility of the assay for screening of pooled mosquitoes was also confirmed. Replication of a Cameroon isolate of YFV in Ae. aegypti revealed a marked variation in susceptibility among different colonies at different days post infection (pi). The SYBR Green-1 based qRT-PCR assay is a faster, simpler, more sensitive and less expensive procedure for detection and quantification of YFV than other currently used methods.

Evaluation of clinical utility of BTC-2000 for measuring soft tissue fibrosis.

PubMed

Davis, Aileen M; Gerrand, Craig; Griffin, Anthony; O'Sullivan, Brian; Hill, Richard P; Wunder, Jay S; Abudu, Adesegun; Bell, Robert S

2004-09-01

To evaluate whether mechanical tissue parameters, specifically laxity (in millimeters) and energy absorption (millimeters of mercury multiplied by millimeters) as measured by the BTC-2000, could discriminate levels of fibrosis severity among patients treated for extremity soft tissue sarcoma by surgery alone; preoperative radiotherapy (RT) and surgery; and surgery followed by postoperative RT. A total of 41 patients were treated for extremity soft tissue sarcoma by surgery alone (n = 11); preoperative RT (50 Gy in 2-Gy daily fractions) and surgery (n = 15); and surgery followed by postoperative RT (66 Gy in 2-Gy daily fractions; n = 15). Serial fibrosis measurements were evaluated at equal intervals from the midpoint of the surgical incision along the length of the incision. On the basis of the average of these measurements, differences among the three groups were analyzed using analysis of variance. Pair-wise statistically significant differences were found among the three treatment groups for both laxity and energy absorption as determined by the average of all measurements. The treatment difference remained statistically significant even after adjusting for differences based on the untreated contralateral limb and anatomic site (p <0.001 and p = 0.002 for laxity and energy absorption, respectively). The biomechanical tissue parameters of laxity and energy absorption discriminated fibrosis severity in patients treated with different RT doses. The BTC-2000 may provide a useful quantitative measure of soft tissue fibrosis.

Revived STIS. II. Properties of Stars in the Next Generation Spectral Library

NASA Technical Reports Server (NTRS)

Heap, Sara R.; Lindler, D.

2010-01-01

Spectroscopic surveys of galaxies at high redshift will bring the rest-frame ultraviolet into view of large, ground-based telescopes. The UV-blue spectral region is rich in diagnostics, but these diagnostics have not yet been calibrated in terms of the properties of the responsible stellar population(s). Such calibrations are now possible with Hubble's Next Generation Spectral Library (NGSL). The NGSL contains UV-optical spectra (0.2 - 1.0 microns) of 374 stars having a wide range in temperature, luminosity, and metallicity. We will describe our work to derive basic stellar parameters from NGSL spectra using modern model spectra and to use these stellar parameters to develop UV-blue spectral diagnostics.

Dust Spectra from Above and Below

NASA Technical Reports Server (NTRS)

2004-01-01

Spectra of martian dust taken by the Mars Exploration Rover Spirit's mini-thermal emission spectrometer are compared to that of the orbital Mars Global Surveyor's thermal emission spectrometer. The graph shows that the two instruments are in excellent agreement.

Rover Senses Carbon Dioxide [figure removed for brevity, see original site] Click on image for larger view

This graph, consisting of data acquired on Mars from the Mars Exploration Rover Spirit's mini-thermal emission spectrometer, shows the light, or spectral, signature of carbon dioxide. Carbon dioxide makes up the bulk of the thin martian atmosphere.

Rover Senses Silicates [figure removed for brevity, see original site] Click on image for larger view

This graph, consisting of data acquired on Mars by the Mars Exploration Rover Spirit's mini-thermal emission spectrometer, shows the light, or spectral, signature of silicates - a group of minerals that form the majority of Earth's crust. Minerals called feldspars and zeolites are likely candidates responsible for this feature.

Rover Senses Bound Water [figure removed for brevity, see original site] Click on image for larger view

This graph, consisting of data acquired on Mars from the Mars Exploration Rover Spirit's mini-thermal emission spectrometer, shows the light, or spectral, signature of an as-of-yet unidentified mineral that contains bound water in its crystal structure. Minerals such as gypsum and zeolites are possible candidates.

Rover Senses Carbonates [figure removed for brevity, see original site] Click on image for larger view

This graph, consisting of data from the Mars Exploration Rover Spirit's mini-thermal emission spectrometer, shows the light, or spectral, signatures of carbonates - minerals common to Earth that form only in water. The detection of trace amounts of carbonates on Mars may be due to an interaction between the water vapor in the atmosphere and minerals on the surface.

Spectral Analysis of the Effects of Daylight Saving Time on Motor Vehicle Fatal Traffic Accidents

DOT National Transportation Integrated Search

1977-04-01

This report shows that Daylight Saving Time (DST) reduces the number of persons killed in motor vehicle fatal traffic accidents by about one percent. This estimate is based on a spectral (Fourier) analysis of these fatalities which utilizes a filteri...

CDF-XL: computing cumulative distribution functions of reaction time data in Excel.

PubMed

Houghton, George; Grange, James A

2011-12-01

In experimental psychology, central tendencies of reaction time (RT) distributions are used to compare different experimental conditions. This emphasis on the central tendency ignores additional information that may be derived from the RT distribution itself. One method for analysing RT distributions is to construct cumulative distribution frequency plots (CDFs; Ratcliff, Psychological Bulletin 86:446-461, 1979). However, this method is difficult to implement in widely available software, severely restricting its use. In this report, we present an Excel-based program, CDF-XL, for constructing and analysing CDFs, with the aim of making such techniques more readily accessible to researchers, including students (CDF-XL can be downloaded free of charge from the Psychonomic Society's online archive). CDF-XL functions as an Excel workbook and starts from the raw experimental data, organised into three columns (Subject, Condition, and RT) on an Input Data worksheet (a point-and-click utility is provided for achieving this format from a broader data set). No further preprocessing or sorting of the data is required. With one click of a button, CDF-XL will generate two forms of cumulative analysis: (1) "standard" CDFs, based on percentiles of participant RT distributions (by condition), and (2) a related analysis employing the participant means of rank-ordered RT bins. Both analyses involve partitioning the data in similar ways, but the first uses a "median"-type measure at the participant level, while the latter uses the mean. The results are presented in three formats: (i) by participants, suitable for entry into further statistical analysis; (ii) grand means by condition; and (iii) completed CDF plots in Excel charts.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Edwards-Bennett, Sophia M., E-mail: edwards2@mskcc.org; Jacks, Lindsay M.; McCormick, Beryl

Purpose: Population-based studies have reported that as many of 35% of black women do not undergo radiotherapy (RT) after breast conservation surgery (BCS). The objective of the present study was to determine whether this trend persisted at a large multidisciplinary cancer center, and to identify the factors that predict for noncompliance with RT and determine the outcomes for this subset of patients. Methods and Materials: Between January 2002 and December 2007, 83 black women underwent BCS at Memorial Sloan-Kettering Cancer Center and were therefore eligible for the present study. Of the 83 women, 38 (46%) had Stage I, 38 (46%)more » Stage II, and 7 (8%) Stage III disease. Of the study cohort, 31 (37%) had triple hormone receptor-negative tumors. RT was recommended for 81 (98%) of the 83 patients (median dose, 60 Gy). Results: Of the 81 women, 12 (15%) did not receive the recommended adjuvant breast RT. Nonreceipt of chemotherapy (p = .003) and older age (p = .009) were associated with nonreceipt of RT. With a median follow-up of 70 months, the 3-year local control, locoregional control, recurrence-free survival, disease-free survival, and overall survival rate was 99% (actuarial 5-year rate, 97%), 96% (actuarial 5-year rate, 93%), 95% (actuarial 5-year rate, 92%), 92% (actuarial 5-year rate, 89%), and 95% (actuarial 5-year rate, 91%), respectively. Conclusion: We found a greater rate of utilization adjuvant breast RT (85%) among black women after BCS than has been reported in recent studies, indicating that excellent outcomes are attainable for black women after BCS when care is administered in a multidisciplinary cancer center.« less

Comparing individual differences in inconsistency and plasticity as predictors of cognitive function in older adults.

PubMed

Grand, Jacob H G; Stawski, Robert S; MacDonald, Stuart W S

2016-01-01

Recent theorizing differentiates key constraints on cognition, including one's current range of processing efficiency (i.e., flexibility or inconsistency) as well as the capacity to expand flexibility over time (i.e., plasticity). The present study uses intensive assessment of response time data to examine the interplay between markers of intraindividual variability (inconsistency) and gains across biweekly retest sessions (plasticity) in relation to age-related cognitive function. Participants included 304 adults (aged 64 to 92 years: M = 74.02, SD = 5.95) from Project MIND, a longitudinal burst design study assessing performance across micro and macro intervals (response latency trials, weekly bursts, annual retests). For two reaction time (RT) measures (choice RT and one-back choice RT), baseline measures of RT inconsistency (intraindividual standard deviation, ISD, across trials at the first testing session) and plasticity (within-person performance gains in average RT across the 5 biweekly burst sessions) were computed and were then employed in linear mixed models as predictors of individual differences in cognitive function and longitudinal (6-year) rates of cognitive change. Independent of chronological age and years of education, higher RT inconsistency was associated uniformly with poorer cognitive function at baseline and with increased cognitive decline for measures of episodic memory and crystallized verbal ability. In contrast, predictive associations for plasticity were more modest for baseline cognitive function and were absent for 6-year cognitive change. These findings underscore the potential utility of response times for articulating inconsistency and plasticity as dynamic predictors of cognitive function in older adults.

Increasing use of radical prostatectomy for locally advanced prostate cancer in the USA and Germany: a comparative population-based study.

PubMed

Hager, B; Kraywinkel, K; Keck, B; Katalinic, A; Meyer, M; Zeissig, S R; Scheufele, R; Wirth, M P; Huber, J

2017-03-01

Current guidelines do not recommend a preferred treatment modality for locally advanced prostate cancer. The aim of the study was to compare treatment patterns found in the USA and Germany and to analyze possible trends over time. We compared 'Surveillance Epidemiology and End Results' (SEER) data (USA) with reports from four German federal epidemiological cancer registries (Eastern Germany, Bavaria, Rhineland-Palatinate, Schleswig-Holstein), both from 2004 to 2012. We defined locally advanced prostate cancer as clinical stage T3 or T4. Exclusion criteria were metastatic disease and age over 79 years. We identified 9127 (USA) and 11 051 (Germany) patients with locally advanced prostate cancer. The share was 2.1% in the USA compared with 6.0% in Germany (P<0.001). In the United States, the utilization of radiotherapy (RT) and radical prostatectomy (RP) was comparably high with 42.0% (RT) and 42.8% (RP). In Germany, the major treatment option was RP with 36.7% followed by RT with 22.1%. During the study period, the use of RP increased in both countries (USA P=0.001 and Germany P=0.003), whereas RT numbers declined (USA P=0.003 and Germany P=0.002). The share of adjuvant RT (aRT) was similar in both countries (USA 21.7% vs Germany 20.7%). We found distinctive differences in treating locally advanced prostate cancer between USA and Germany, but similar trends over time. In the last decade, a growing number of patients underwent RP as a possible first step within a multimodal concept.

Shading correction for cone-beam CT in radiotherapy: validation of dose calculation accuracy using clinical images

NASA Astrophysics Data System (ADS)

Marchant, T. E.; Joshi, K. D.; Moore, C. J.

2017-03-01

Cone-beam CT (CBCT) images are routinely acquired to verify patient position in radiotherapy (RT), but are typically not calibrated in Hounsfield Units (HU) and feature non-uniformity due to X-ray scatter and detector persistence effects. This prevents direct use of CBCT for re-calculation of RT delivered dose. We previously developed a prior-image based correction method to restore HU values and improve uniformity of CBCT images. Here we validate the accuracy with which corrected CBCT can be used for dosimetric assessment of RT delivery, using CBCT images and RT plans for 45 patients including pelvis, lung and head sites. Dose distributions were calculated based on each patient's original RT plan and using CBCT image values for tissue heterogeneity correction. Clinically relevant dose metrics were calculated (e.g. median and minimum target dose, maximum organ at risk dose). Accuracy of CBCT based dose metrics was determined using an "override ratio" method where the ratio of the dose metric to that calculated on a bulk-density assigned version of the image is assumed to be constant for each patient, allowing comparison to "gold standard" CT. For pelvis and head images the proportion of dose errors >2% was reduced from 40% to 1.3% after applying shading correction. For lung images the proportion of dose errors >3% was reduced from 66% to 2.2%. Application of shading correction to CBCT images greatly improves their utility for dosimetric assessment of RT delivery, allowing high confidence that CBCT dose calculations are accurate within 2-3%.

Using multimedia information and communication technology (ICT) to provide added value to reminiscence therapy for people with dementia : Lessons learned from three field studies.

PubMed

Bejan, Alexander; Gündogdu, Ramazan; Butz, Katherina; Müller, Nadine; Kunze, Christophe; König, Peter

2018-01-01

In the care of people with dementia (PwD), occupational therapies and activities aiming at maintaining the quality of life of PwD, such as reminiscence therapy (RT), are taking on a more and more important role. Information and communication technology (ICT) has the potential to improve and to facilitate RT by facilitating access to and selection of biographical information and related contents or by providing novel multimodal interaction forms to trigger memories; however, interactive multimedia technology is barely used in practice. This article presents three exploratory field studies that evaluated different aspects of RT technology use for PwD in care homes, including the utilization of online movie databases, interactive surface touch computers as well as natural user interfaces allowing gestures and haptic interaction. In these studies, the usage of prototype systems was observed in occupational sessions by 5, 12 and 16 PwD. The results indicate positive effects of technology use, e. g. in the form of verbally elicited reminiscence statements, expressed joy and playful interaction. Lessons learned for the design of technology-based RT interventions are presented and discussed.

High power infrared QCLs: advances and applications

NASA Astrophysics Data System (ADS)

Patel, C. Kumar N.

2012-01-01

QCLs are becoming the most important sources of laser radiation in the midwave infrared (MWIR) and longwave infrared (LWIR) regions because of their size, weight, power and reliability advantages over other laser sources in the same spectral regions. The availability of multiwatt RT operation QCLs from 3.5 μm to >16 μm with wall plug efficiency of 10% or higher is hastening the replacement of traditional sources such as OPOs and OPSELs in many applications. QCLs can replace CO2 lasers in many low power applications. Of the two leading groups in improvements in QCL performance, Pranalytica is the commercial organization that has been supplying the highest performance QCLs to various customers for over four year. Using a new QCL design concept, the non-resonant extraction [1], we have achieved CW/RT power of >4.7 W and WPE of >17% in the 4.4 μm - 5.0 μm region. In the LWIR region, we have recently demonstrated QCLs with CW/RT power exceeding 1 W with WPE of nearly 10 % in the 7.0 μm-10.0 μm region. In general, the high power CW/RT operation requires use of TECs to maintain QCLs at appropriate operating temperatures. However, TECs consume additional electrical power, which is not desirable for handheld, battery-operated applications, where system power conversion efficiency is more important than just the QCL chip level power conversion efficiency. In high duty cycle pulsed (quasi-CW) mode, the QCLs can be operated without TECs and have produced nearly the same average power as that available in CW mode with TECs. Multiwatt average powers are obtained even in ambient T>70°C, with true efficiency of electrical power-to-optical power conversion being above 10%. Because of the availability of QCLs with multiwatt power outputs and wavelength range covering a spectral region from ~3.5 μm to >16 μm, the QCLs have found instantaneous acceptance for insertion into multitude of defense and homeland security applications, including laser sources for infrared countermeasures for protecting aircraft from MANPADS, testing of infrared countermeasures, MWIR and LWIR lasers for identify-friend-or-foe (IFF) personnel beacons, infrared target illuminators and designators and tunable QCL applications including in-situ and standoff detection of chemical warfare agents (CWAs) and explosives. The last of these applications addresses a very important and timely need for detection of improvised explosive devices (IEDs) in combat environments like Iraq and Afghanistan.

Resolution-enhanced Mapping Spectrometer

NASA Technical Reports Server (NTRS)

Kumer, J. B.; Aubrun, J. N.; Rosenberg, W. J.; Roche, A. E.

1993-01-01

A familiar mapping spectrometer implementation utilizes two dimensional detector arrays with spectral dispersion along one direction and spatial along the other. Spectral images are formed by spatially scanning across the scene (i.e., push-broom scanning). For imaging grating and prism spectrometers, the slit is perpendicular to the spatial scan direction. For spectrometers utilizing linearly variable focal-plane-mounted filters the spatial scan direction is perpendicular to the direction of spectral variation. These spectrometers share the common limitation that the number of spectral resolution elements is given by the number of pixels along the spectral (or dispersive) direction. Resolution enhancement by first passing the light input to the spectrometer through a scanned etalon or Michelson is discussed. Thus, while a detector element is scanned through a spatial resolution element of the scene, it is also temporally sampled. The analysis for all the pixels in the dispersive direction is addressed. Several specific examples are discussed. The alternate use of a Michelson for the same enhancement purpose is also discussed. Suitable for weight constrained deep space missions, hardware systems were developed including actuators, sensor, and electronics such that low-resolution etalons with performance required for implementation would weigh less than one pound.

Photographic films as remote sensors for measuring albedos of terrestrial surfaces

NASA Technical Reports Server (NTRS)

Pease, S. R.; Pease, R. W.

1972-01-01

To test the feasibility of remotely measuring the albedos of terrestrial surfaces from photographic images, an inquiry was carried out at ground level using several representative common surface targets. Problems of making such measurements with a spectrally selective sensor, such as photographic film, have been compared to previous work utilizing silicon cells. Two photographic approaches have been developed: a multispectral method which utilizes two or three photographic images made through conventional multispectral filters and a single shot method which utilizes the broad spectral sensitivity of black and white infrared film. Sensitometry related to the methods substitutes a Log Albedo scale for the conventional Log Exposure for creating characteristic curves. Certain constraints caused by illumination goemetry are discussed.

Topological anomaly detection performance with multispectral polarimetric imagery

NASA Astrophysics Data System (ADS)

Gartley, M. G.; Basener, W.,

2009-05-01

Polarimetric imaging has demonstrated utility for increasing contrast of manmade targets above natural background clutter. Manual detection of manmade targets in multispectral polarimetric imagery can be challenging and a subjective process for large datasets. Analyst exploitation may be improved utilizing conventional anomaly detection algorithms such as RX. In this paper we examine the performance of a relatively new approach to anomaly detection, which leverages topology theory, applied to spectral polarimetric imagery. Detection results for manmade targets embedded in a complex natural background will be presented for both the RX and Topological Anomaly Detection (TAD) approaches. We will also present detailed results examining detection sensitivities relative to: (1) the number of spectral bands, (2) utilization of Stoke's images versus intensity images, and (3) airborne versus spaceborne measurements.

Solid State Research

DTIC Science & Technology

1991-02-15

imaging in the 3- to 5-/im spectral band [2], Extension of the photoresponse into the long-wavelength infrared ( LWIR ) spectral band, ranging from 8 to 14...jUm, has been demonstrated for IrSi arrays [3]. Recently, a new type of Si-based LWIR detector, utilizing internal photoemission over the hetero...quality thermal images in the LWIR spectral band without uniformity correction. The Geo.44Sio.56 composition was chosen in order to permit low-dark

TH-E-BRF-04: Characterizing the Response of Texture-Based CT Image Features for Quantification of Radiation-Induced Normal Lung Damage

DOE Office of Scientific and Technical Information (OSTI.GOV)

Krafft, S; Court, L; Briere, T

2014-06-15

Purpose: Radiation induced lung damage (RILD) is an important dose-limiting toxicity for patients treated with radiation therapy. Scoring systems for RILD are subjective and limit our ability to find robust predictors of toxicity. We investigate the dose and time-related response for texture-based lung CT image features that serve as potential quantitative measures of RILD. Methods: Pre- and post-RT diagnostic imaging studies were collected for retrospective analysis of 21 patients treated with photon or proton radiotherapy for NSCLC. Total lung and selected isodose contours (0–5, 5–15, 15–25Gy, etc.) were deformably registered from the treatment planning scan to the pre-RT and availablemore » follow-up CT studies for each patient. A CT image analysis framework was utilized to extract 3698 unique texture-based features (including co-occurrence and run length matrices) for each region of interest defined by the isodose contours and the total lung volume. Linear mixed models were fit to determine the relationship between feature change (relative to pre-RT), planned dose and time post-RT. Results: Seventy-three follow-up CT scans from 21 patients (median: 3 scans/patient) were analyzed to describe CT image feature change. At the p=0.05 level, dose affected feature change in 2706 (73.1%) of the available features. Similarly, time affected feature change in 408 (11.0%) of the available features. Both dose and time were significant predictors of feature change in a total of 231 (6.2%) of the extracted image features. Conclusion: Characterizing the dose and time-related response of a large number of texture-based CT image features is the first step toward identifying objective measures of lung toxicity necessary for assessment and prediction of RILD. There is evidence that numerous features are sensitive to both the radiation dose and time after RT. Beyond characterizing feature response, further investigation is warranted to determine the utility of these features as surrogates of clinically significant lung injury.« less

Novel use of the Nintendo Wii board as a measure of reaction time: a study of reproducibility in older and younger adults.

PubMed

Jorgensen, Martin Gronbech; Paramanathan, Sentha; Ryg, Jesper; Masud, Tahir; Andersen, Stig

2015-07-10

Reaction time (RT) has been associated with falls in older adults, but is not routinely tested in clinical practice. A simple, portable, inexpensive and reliable method for measuring RT is desirable for clinical settings. We therefore developed a custom software, which utilizes the portable and low-cost standard Nintendo Wii board (NWB) to record RT. The aims in the study were to (1) explore if the test could differentiate old and young adults, and (2) to study learning effects between test-sessions, and (3) to examine reproducibility. A young (n = 25, age 20-35 years, mean BMI of 22.6) and an old (n = 25, age ≥65 years, mean BMI of 26.3) study-population were enrolled in this within- and between-day reproducibility study. A standard NWB was used along with the custom software to obtain RT from participants in milliseconds. A mixed effect model was initially used to explore systematic differences associated with age, and test-session. Reproducibility was then expressed by Intraclass Correlation Coefficients (ICC), Coefficient of Variance (CV), and Typical Error (TE). The RT tests was able to differentiate the old group from the young group in both the upper extremity test (p < 0.001; -170.7 ms (95%CI -209.4; -132.0)) and the lower extremity test (p < 0.001; -224.3 ms (95%CI -274.6; -173.9)). Moreover, the mixed effect model showed no significant learning effect between sessions with exception of the lower extremity test between session one and three for the young group (-35,5 ms; 4.6%; p = 0.02). A good within- and between-day reproducibility (ICC: 0.76-0.87; CV: 8.5-12.9; TE: 45.7-95.1 ms) was achieved for both the upper and lower extremity test with the fastest of three trials in both groups. A low-cost and portable reaction test utilizing a standard Nintendo wii board showed good reproducibility, no or little systematic learning effects across test-sessions, and could differentiate between young and older adults in both upper and lower extremity tests.

Empirical test of the spectral invariants theory using imaging spectroscopy data from a coniferous forest

NASA Astrophysics Data System (ADS)

Lukeš, Petr; Rautiainen, Miina; Stenberg, Pauline; Malenovský, Zbyněk

2011-08-01

The spectral invariants theory presents an alternative approach for modeling canopy scattering in remote sensing applications. The theory is particularly appealing in the case of coniferous forests, which typically display grouped structures and require computationally intensive calculation to account for the geometric arrangement of their canopies. However, the validity of the spectral invariants theory should be tested with empirical data sets from different vegetation types. In this paper, we evaluate a method to retrieve two canopy spectral invariants, the recollision probability and the escape factor, for a coniferous forest using imaging spectroscopy data from multiangular CHRIS PROBA and NADIR-view AISA Eagle sensors. Our results indicated that in coniferous canopies the spectral invariants theory performs well in the near infrared spectral range. In the visible range, on the other hand, the spectral invariants theory may not be useful. Secondly, our study suggested that retrieval of the escape factor could be used as a new method to describe the BRDF of a canopy.

Physical Interpretation of the Correlation Between Multi-Angle Spectral Data and Canopy Height

NASA Technical Reports Server (NTRS)

Schull, M. A.; Ganguly, S.; Samanta, A.; Huang, D.; Shabanov, N. V.; Jenkins, J. P.; Chiu, J. C.; Marshak, A.; Blair, J. B.; Myneni, R. B.;

Spectral reflectance properties of major objects in desert oasis: a case study of the Weigan-Kuqa river delta oasis in Xinjiang, China.

PubMed

Zhang, Fei; Tiyip, Tashpolat; Ding, Jianli; Sawut, Mamat; Tashpolat, Nigara; Kung, Hsiangte; Han, Guihong; Gui, Dongwei

2012-08-01

Aiming at the remote sensing application has been increasingly relying on ground object spectral characteristics. In order to further research the spectral reflectance characteristics in arid area, this study was performed in the typical delta oasis of Weigan and Kuqa rivers located north of Tarim Basin. Data were collected from geo-targets at multiple sites in various field conditions. The spectra data were collected for different soil types including saline-alkaline soil, silt sandy soil, cotton field, and others; vegetations of Alhagi sparsifolia, Phragmites australis, Tamarix, Halostachys caspica, etc., and water bodies. Next, the data were processed to remove high-frequency noise, and the spectral curves were smoothed with the moving average method. The derivative spectrum was generated after eliminating environmental background noise so that to distinguish the original overlap spectra. After continuum removal of the undesirable absorbance, the spectrum curves were able to highlight features for both optical absorbance and reflectance. The spectrum information of each ground object is essential for fully utilizing the multispectrum data generated by remote sensing, which will need a representative spectral library. In this study using ENVI 4.5 software, a preliminary spectral library of surface features was constructed using the data surveyed in the study area. This library can support remote sensing activities such as feature investigation, vegetation classification, and environmental monitoring in the delta oasis region. Future plan will focus on sharing and standardizing the criteria of professional spectral library and to expand and promote the utilization of the spectral databases.

Cardiac Mortality in Patients With Stage I and II Diffuse Large B-Cell Lymphoma Treated With and Without Radiation: A Surveillance, Epidemiology, and End-Results Analysis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pugh, Thomas J., E-mail: thomas.pugh@ucdenver.ed; Ballonoff, Ari; Rusthoven, Kyle E.

2010-03-01

Purpose: Standard therapy for stage I and II diffuse large B-cell lymphoma consists of combined modality therapy with anthracycline-based chemotherapy, anti-CD20 antibody, and radiation therapy (RT). Curative approaches without RT typically utilize more intensive and/or protracted chemotherapy schedules. Anthracycline-based chemotherapy regimens are associated with a dose-dependent risk of left ventricular systolic dysfunction. We hypothesize that patients treated without RT, i.e., those who are treated with greater total chemotherapy cycles and hence cumulative anthracycline exposure, are at increased risk of cardiac mortality. Methods and Materials: The rate of cardiac-specific mortality (CSM) was analyzed in patients with stage I and II diffusemore » large B-cell lymphoma diagnosed between 1988 and 2004 by querying the National Cancer Institute Surveillance, Epidemiology, and End-Results database. Analyzable data included gender, age, race, stage, presence of extranodal disease, and RT administration. Results: A total of 15,454 patients met selection criteria; 6,021 (39%) patients received RT. The median follow-up was 36 months (range, 6-180 months). The median age was 64 years. The actuarial incidence rates of CSM at 5, 10, and 15 years were 4.3%, 9.0%, and 13.8%, respectively, in patients treated with RT vs. 5.9%, 10.8% and 16.1%, respectively, in patients treated without RT (p < 0.0001; hazard ratio, 1.35; 95% confidence interval [CI]: 1.16-1.56). The increase in cardiac deaths for patients treated without RT persisted throughout the follow-up period. On multivariate analysis, treatment without RT remained independently associated with an increased risk of CSM (Cox hazard ratio, 1.32; 95% CI: 1.13-1.54; p = 0.0005). Conclusions: Increased anthracycline exposure in patients treated only with chemotherapy regimens may result in an increase in cardiac deaths, detectable only through analysis of large sample sizes. Confirmatory evaluation through meta-analysis of randomized data and design of large prospective trials is warranted.« less

Single-pair fluorescence resonance energy transfer analysis of mRNA transcripts for highly sensitive gene expression profiling in near real time.

PubMed

Peng, Zhiyong; Young, Brandon; Baird, Alison E; Soper, Steven A

2013-08-20

Expression analysis of mRNAs transcribed from certain genes can be used as important sources of biomarkers for in vitro diagnostics. While the use of reverse transcription quantitative PCR (RT-qPCR) can provide excellent analytical sensitivity for monitoring transcript numbers, more sensitive approaches for expression analysis that can report results in near real-time are needed for many critical applications. We report a novel assay that can provide exquisite limits-of-quantitation and consists of reverse transcription (RT) followed by a ligase detection reaction (LDR) with single-pair fluorescence resonance energy transfer (spFRET) to provide digital readout through molecular counting. For this assay, no PCR was employed, which enabled short assay turnaround times. To facilitate implementation of the assay, a cyclic olefin copolymer (COC) microchip, which was fabricated using hot embossing, was employed to carry out the LDR in a continuous flow format with online single-molecule detection following the LDR. As demonstrators of the assay's utility, MMP-7 mRNA was expression profiled from several colorectal cancer cell lines. It was found that the RT-LDR/spFRET assay produced highly linear calibration plots even in the low copy number regime. Comparison to RT-qPCR indicated a better linearity over the low copy number range investigated (10-10,000 copies) with an R(2) = 0.9995 for RT-LDR/spFRET and R(2) = 0.98 for RT-qPCR. In addition, differentiating between copy numbers of 10 and 50 could be performed with higher confidence using RT-LDR/spFRET. To demonstrate the short assay turnaround times obtainable using the RT-LDR/spFRET assay, a two thermal cycle LDR was carried out on amphiphysin gene transcripts that can serve as important diagnostic markers for ischemic stroke. The ability to supply diagnostic information on possible stroke events in short turnaround times using RT-LDR/spFRET will enable clinicians to treat patients effectively with appropriate time-sensitive therapeutics.

Single-Pair Fret Analysis of mRNA Transcripts for Highly Sensitive Gene Expression Profiling in Near Real Time

PubMed Central

Peng, Zhiyong; Young, Brandon; Baird, Alison E.; Soper, Steven A.

2013-01-01

Expression analysis of mRNAs transcribed from certain genes can be used as important sources of biomarkers for in vitro diagnostics. While the use of reverse transcription quantitative PCR (RT-qPCR) can provide excellent analytical sensitivity for monitoring transcript numbers, more sensitive approaches for expression analysis that can report results in near real-time are needed for many critical applications. We report a novel assay that can provide exquisite limits-of-quantitation and consists of reverse transcription (RT) followed by a ligase detection reaction (LDR) with single-pair fluorescence resonance energy transfer (spFRET) to provide digital readout through molecular counting. For this assay, no PCR was employed, which enabled short assay turnaround times. To facilitate implementation of the assay, a cyclic olefin copolymer (COC) microchip, which was fabricated using hot embossing, was employed to carry out the LDR in a continuous flow format with on-line single-molecule detection following the LDR. As demonstrators of the assay's utility, MMP-7 mRNA was expression profiled from several colorectal cancer cell lines. It was found that the RT-LDR/spFRET assay produced highly linear calibration plots even in the low copy number regime. Comparison to RT-qPCR indicated a better linearity over the low copy number range investigated (10 − 10,000 copies) with an R2 = 0.9995 for RT-LDR/spFRET and R2 = 0.98 for RT-qPCR. In addition, differentiating between copy numbers of 10 and 50 could be performed with higher confidence using RT-LDR/spFRET. To demonstrate the short assay turnaround times obtainable using the RT-LDR/spFRET assay, a 2 thermal cycle LDR was carried out on amphiphysin gene transcripts that can serve as important diagnostic markers for ischemic stroke. The ability to supply diagnostic information on possible stroke events in short turnaround times using RT-LDR/spFRET will enable clinicians to treat patients effectively with appropriate time-sensitive therapeutics. PMID:23869556

Assessment of Satellite-Derived Surface Reflectances by NASA's CAR Airborne Radiometer over Railroad Valley, Nevada

NASA Technical Reports Server (NTRS)

Kharbouche, Said; Muller, Jan-Peter; Gatebe, Charles K.; Scanlon, Tracy; Banks, Andrew C.

2017-01-01

CAR (Cloud Absorption Radiometer) is a multi-angular and multi-spectral airborne radiometer instrument, whose radiometric and geometric characteristics are well calibrated and adjusted before and after each flight campaign. CAR was built by NASA (National Aeronautics and Space Administration) in 1984. On 16 May 2008, a CAR flight campaign took place over the well-known calibration and validation site of Railroad Valley in Nevada (38.504 deg N, 115.692 deg W).The campaign coincided with the overpasses of several key EO (Earth Observation) satellites such as Landsat-7, Envisat and Terra. Thus, there are nearly simultaneous measurements from these satellites and the CAR airborne sensor over the same calibration site. The CAR spectral bands are close to those of most EO satellites. CAR has the ability to cover the whole range of azimuth view angles and a variety of zenith angles depending on altitude and, as a consequence, the biases seen between satellite and CAR measurements due to both unmatched spectral bands and unmatched angles can be significantly reduced. A comparison is presented here between CARs land surface reflectance (BRF or Bidirectional Reflectance Factor) with those derived from Terra/MODIS (MOD09 and MAIAC), Terra/MISR, Envisat/MERIS and Landsat-7. In this study, we utilized CAR data from low altitude flights (approx. 180 m above the surface) in order to minimize the effects of the atmosphere on these measurements and then obtain a valuable ground-truth data set of surface reflectance. Furthermore, this study shows that differences between measurements caused by surface heterogeneity can be tolerated, thanks to the high homogeneity of the study site on the one hand, and on the other hand, to the spatial sampling and the large number of CAR samples. These results demonstrate that satellite BRF measurements over this site are in good agreement with CAR with variable biases across different spectral bands. This is most likely due to residual aerosol effects in the EO derived reflectances.

Chromotomosynthesis for high speed hyperspectral imagery

NASA Astrophysics Data System (ADS)

Bostick, Randall L.; Perram, Glen P.

2012-09-01

A rotating direct vision prism, chromotomosynthetic imaging (CTI) system operating in the visible creates hyperspectral imagery by collecting a set of 2D images with each spectrally projected at a different rotation angle of the prism. Mathematical reconstruction techniques that have been well tested in the field of medical physics are used to reconstruct the data to produce the 3D hyperspectral image. The instrument operates with a 100 mm focusing lens in the spectral range of 400-900 nm with a field of view of 71.6 mrad and angular resolution of 0.8-1.6 μrad. The spectral resolution is 0.6 nm at the shortest wavelengths, degrading to over 10 nm at the longest wavelengths. Measurements using a pointlike target show that performance is limited by chromatic aberration. The accuracy and utility of the instrument is assessed by comparing the CTI results to spatial data collected by a wideband image and hyperspectral data collected using a liquid crystal tunable filter (LCTF). The wide-band spatial content of the scene reconstructed from the CTI data is of same or better quality as a single frame collected by the undispersed imaging system with projections taken at every 1°. Performance is dependent on the number of projections used, with projections at 5° producing adequate results in terms of target characterization. The data collected by the CTI system can provide spatial information of equal quality as a comparable imaging system, provide high-frame rate slitless 1-D spectra, and generate 3-D hyperspectral imagery which can be exploited to provide the same results as a traditional multi-band spectral imaging system. While this prototype does not operate at high speeds, components exist which will allow for CTI systems to generate hyperspectral video imagery at rates greater than 100 Hz. The instrument has considerable potential for characterizing bomb detonations, muzzle flashes, and other battlefield combustion events.

Miniature Compressive Ultra-spectral Imaging System Utilizing a Single Liquid Crystal Phase Retarder

NASA Astrophysics Data System (ADS)

August, Isaac; Oiknine, Yaniv; Abuleil, Marwan; Abdulhalim, Ibrahim; Stern, Adrian

2016-03-01

Spectroscopic imaging has been proved to be an effective tool for many applications in a variety of fields, such as biology, medicine, agriculture, remote sensing and industrial process inspection. However, due to the demand for high spectral and spatial resolution it became extremely challenging to design and implement such systems in a miniaturized and cost effective manner. Using a Compressive Sensing (CS) setup based on a single variable Liquid Crystal (LC) retarder and a sensor array, we present an innovative Miniature Ultra-Spectral Imaging (MUSI) system. The LC retarder acts as a compact wide band spectral modulator. Within the framework of CS, a sequence of spectrally modulated images is used to recover ultra-spectral image cubes. Using the presented compressive MUSI system, we demonstrate the reconstruction of gigapixel spatio-spectral image cubes from spectral scanning shots numbering an order of magnitude less than would be required using conventional systems.

Miniature Compressive Ultra-spectral Imaging System Utilizing a Single Liquid Crystal Phase Retarder.

PubMed

August, Isaac; Oiknine, Yaniv; AbuLeil, Marwan; Abdulhalim, Ibrahim; Stern, Adrian

2016-03-23

Spectroscopic imaging has been proved to be an effective tool for many applications in a variety of fields, such as biology, medicine, agriculture, remote sensing and industrial process inspection. However, due to the demand for high spectral and spatial resolution it became extremely challenging to design and implement such systems in a miniaturized and cost effective manner. Using a Compressive Sensing (CS) setup based on a single variable Liquid Crystal (LC) retarder and a sensor array, we present an innovative Miniature Ultra-Spectral Imaging (MUSI) system. The LC retarder acts as a compact wide band spectral modulator. Within the framework of CS, a sequence of spectrally modulated images is used to recover ultra-spectral image cubes. Using the presented compressive MUSI system, we demonstrate the reconstruction of gigapixel spatio-spectral image cubes from spectral scanning shots numbering an order of magnitude less than would be required using conventional systems.

Spectral-Spatial Scale Invariant Feature Transform for Hyperspectral Images.

PubMed

Al-Khafaji, Suhad Lateef; Jun Zhou; Zia, Ali; Liew, Alan Wee-Chung

2018-02-01

Spectral-spatial feature extraction is an important task in hyperspectral image processing. In this paper we propose a novel method to extract distinctive invariant features from hyperspectral images for registration of hyperspectral images with different spectral conditions. Spectral condition means images are captured with different incident lights, viewing angles, or using different hyperspectral cameras. In addition, spectral condition includes images of objects with the same shape but different materials. This method, which is named spectral-spatial scale invariant feature transform (SS-SIFT), explores both spectral and spatial dimensions simultaneously to extract spectral and geometric transformation invariant features. Similar to the classic SIFT algorithm, SS-SIFT consists of keypoint detection and descriptor construction steps. Keypoints are extracted from spectral-spatial scale space and are detected from extrema after 3D difference of Gaussian is applied to the data cube. Two descriptors are proposed for each keypoint by exploring the distribution of spectral-spatial gradient magnitude in its local 3D neighborhood. The effectiveness of the SS-SIFT approach is validated on images collected in different light conditions, different geometric projections, and using two hyperspectral cameras with different spectral wavelength ranges and resolutions. The experimental results show that our method generates robust invariant features for spectral-spatial image matching.

Coupled retrieval of water cloud and above-cloud aerosol properties using the Airborne Multiangle SpectroPolarimetric Imager (AirMSPI)

NASA Astrophysics Data System (ADS)

Xu, F.; van Harten, G.; Diner, D. J.; Rheingans, B. E.; Tosca, M.; Seidel, F. C.; Bull, M. A.; Tkatcheva, I. N.; McDuffie, J. L.; Garay, M. J.; Davis, A. B.; Jovanovic, V. M.; Brian, C.; Alexandrov, M. D.; Hostetler, C. A.; Ferrare, R. A.; Burton, S. P.

2017-12-01

The Airborne Multiangle SpectroPolarimetric Imager (AirMSPI) has been flying aboard the NASA ER-2 high altitude aircraft since October 2010. AirMSPI acquires radiance and polarization data in bands centered at 355, 380, 445, 470*, 555, 660*, 865*, and 935 nm (*denotes polarimetric bands). In sweep mode, georectified images cover an area of 80-100 km (along track) by 10-25 km (across track) between ±66° off nadir, with a map-projected spatial resolution of 25 meters. An efficient and flexible retrieval algorithm has been developed using AirMSPI polarimetric bands for simultaneous retrieval of cloud and above-cloud aerosol microphysical properties. We design a three-step retrieval approach, namely 1) estimating effective droplet size distribution using polarimetric cloudbow observations and using it as initial guess for Step 2; 2) combining water cloud and aerosol above cloud retrieval by fitting polarimetric signals at all scattering angles (e.g. from 80° to 180°); and 3) constructing a lookup table of radiance for a set of cloud optical depth grids using aerosol and cloud information retrieved from Step 2 and then estimating pixel-scale cloud optical depth based on 1D radiative transfer (RT) theory by fitting the AirMSPI radiance. Retrieval uncertainty is formulated by accounting for instrumental errors and constraints imposed on spectral variations of aerosol and cloud droplet optical properties. As the forward RT model, a hybrid approach is developed to combine the computational strengths of Markov-chain and adding-doubling methods to model polarized RT in a coupled aerosol, Rayleigh and cloud system. Our retrieval approach is tested using 134 AirMSPI datasets acquired during NASA ORACLES field campaign in 09/2016, with low to high aerosol loadings. For validation, the retrieved aerosol optical depths and cloud-top heights are compared to coincident High Spectral Resolution Lidar-2 (HSRL-2) data, and the droplet size parameters including effective radius and effective variance and cloud optical thickness are compared to coincident Research Scanning Polarimeter (RSP) data.