MsZEP, a novel zeaxanthin epoxidase gene from alfalfa (Medicago sativa), confers drought and salt tolerance in transgenic tobacco.

PubMed

Zhang, Zhiqiang; Wang, Yafang; Chang, Leqin; Zhang, Tong; An, Jie; Liu, Yushi; Cao, Yuman; Zhao, Xia; Sha, Xuyang; Hu, Tianming; Yang, Peizhi

2016-02-01

The zeaxanthin epoxidase gene ( MsZEP ) was cloned and characterized from alfalfa and validated for its function of tolerance toward drought and salt stresses by heterologous expression in Nicotiana tabacum. Zeaxanthin epoxidase (ZEP) plays important roles in plant response to various environment stresses due to its functions in ABA biosynthetic and the xanthophyll cycle. To understand the expression characteristics and the biological functions of ZEP in alfalfa (Medicago sativa), a novel gene, designated as MsZEP (KM044311), was cloned, characterized and overexpressed in Nicotiana tabacum. The open reading frame of MsZEP contains 1992 bp nucleotides and encodes a 663-amino acid polypeptide. Amino acid sequence alignment indicated that deduced MsZEP protein was highly homologous to other plant ZEP sequences. Phylogenetic analysis showed that MsZEP was grouped into a branch with other legume plants. Real-time quantitative PCR revealed that MsZEP gene expression was clearly tissue-specific, and the expression levels were higher in green tissues (leaves and stems) than in roots. MsZEP expression decreased in shoots under drought, cold, heat and ABA treatment, while the expression levels in roots showed different trends. Besides, the results showed that nodules could up-regulate the MsZEP expression under non-stressful conditions and in the earlier stage of different abiotic stress. Heterologous expression of the MsZEP gene in N. tabacum could confer tolerance to drought and salt stress by affecting various physiological pathways, ABA levels and stress-responsive genes expression. Taken together, these results suggested that the MsZEP gene may be involved in alfalfa responses to different abiotic stresses and nodules, and could enhance drought and salt tolerance of transgenic tobacco by heterologous expression.

Approaches in modulating proline metabolism in plants for salt and drought stress tolerance: Phytohormones, mineral nutrients and transgenics.

PubMed

Per, Tasir S; Khan, Nafees A; Reddy, Palakolanu Sudhakar; Masood, Asim; Hasanuzzaman, Mirza; Khan, M Iqbal R; Anjum, Naser A

2017-06-01

Major abiotic stress factors such as salt and drought adversely affect important physiological processes and biochemical mechanisms and cause severe loss in crop productivity worldwide. Plants develop various strategies to stand healthy against these stress factors. The accumulation of proline (Pro) is one of the striking metabolic responses of plants to salt and drought stress. Pro biosynthesis and signalling contribute to the redox balance of cell under normal and stressful conditions. However, literature is meager on the sustainable strategies potentially fit for modulating Pro biosynthesis and production in stressed plants. Considering the recent literature, this paper in its first part overviews Pro biosynthesis and transport in plants and also briefly highlights the significance of Pro in plant responses to salt and drought stress. Secondly, this paper discusses mechanisms underlying the regulation of Pro metabolism in salt and drought-exposed plant via phytohormones, mineral nutrients and transgenic approaches. The outcome of the studies may give new opportunities in modulating Pro metabolism for improving plant tolerance to salt and drought stress and benefit sustainable agriculture. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

Overexpression of a maize plasma membrane intrinsic protein ZmPIP1;1 confers drought and salt tolerance in Arabidopsis.

PubMed

Zhou, Lian; Zhou, Jing; Xiong, Yuhan; Liu, Chaoxian; Wang, Jiuguang; Wang, Guoqiang; Cai, Yilin

2018-01-01

Drought and salt stress are major abiotic stress that inhibit plants growth and development, here we report a plasma membrane intrinsic protein ZmPIP1;1 from maize and identified its function in drought and salt tolerance in Arabidopsis. ZmPIP1;1 was localized to the plasma membrane and endoplasmic reticulum in maize protoplasts. Treatment with PEG or NaCl resulted in induced expression of ZmPIP1;1 in root and leaves. Constitutive overexpression of ZmPIP1;1 in transgenic Arabidopsis plants resulted in enhanced drought and salt stress tolerance compared to wild type. A number of stress responsive genes involved in cellular osmoprotection in ZmPIP1;1 overexpression plants were up-regulated under drought or salt condition. ZmPIP1;1 overexpression plants showed higher activities of reactive oxygen species (ROS) scavenging enzymes such as catalase and superoxide dismutase, lower contents of stress-induced ROS such as superoxide, hydrogen peroxide and malondialdehyde, and higher levels of proline under drought and salt stress than did wild type. ZmPIP1;1 may play a role in drought and salt stress tolerance by inducing of stress responsive genes and increasing of ROS scavenging enzymes activities, and could provide a valuable gene for further plant breeding.

A new Em-like protein from Lactuca sativa, LsEm1, enhances drought and salt stress tolerance in Escherichia coli and rice.

PubMed

Xiang, Dian-Jun; Man, Li-Li; Zhang, Chun-Lan; Peng-Liu; Li, Zhi-Gang; Zheng, Gen-Chang

2018-02-07

Late embryogenesis abundant (LEA) proteins are closely related to abiotic stress tolerance of plants. In the present study, we identified a novel Em-like gene from lettuce, termed LsEm1, which could be classified into group 1 LEA proteins, and shared high homology with Cynara cardunculus Em protein. The LsEm1 protein contained three different 20-mer conserved elements (C-element, N-element, and M-element) in the C-termini, N-termini, and middle-region, respectively. The LsEm1 mRNAs were accumulated in all examined tissues during the flowering and mature stages, with a little accumulation in the roots and leaves during the seedling stage. Furthermore, the LsEm1 gene was also expressed in response to salt, dehydration, abscisic acid (ABA), and cold stresses in young seedlings. The LsEm1 protein could effectively reduce damage to the lactate dehydrogenase (LDH) and protect LDH activity under desiccation and salt treatments. The Escherichia coli cells overexpressing the LsEm1 gene showed a growth advantage over the control under drought and salt stresses. Moreover, LsEm1-overexpressing rice seeds were relatively sensitive to exogenously applied ABA, suggesting that the LsEm1 gene might depend on an ABA signaling pathway in response to environmental stresses. The transgenic rice plants overexpressing the LsEm1 gene showed higher tolerance to drought and salt stresses than did wild-type (WT) plants on the basis of the germination performances, higher survival rates, higher chlorophyll content, more accumulation of soluble sugar, lower relative electrolyte leakage, and higher superoxide dismutase activity under stress conditions. The LsEm1-overexpressing rice lines also showed less yield loss compared with WT rice under stress conditions. Furthermore, the LsEm1 gene had a positive effect on the expression of the OsCDPK9, OsCDPK13, OsCDPK15, OsCDPK25, and rab21 (rab16a) genes in transgenic rice under drought and salt stress conditions, implying that overexpression of these

Stress cross-response of the antioxidative system promoted by superimposed drought and cold conditions in Coffea spp.

PubMed

Ramalho, José C; Rodrigues, Ana P; Lidon, Fernando C; Marques, Luís M C; Leitão, A Eduardo; Fortunato, Ana S; Pais, Isabel P; Silva, Maria J; Scotti-Campos, Paula; Lopes, António; Reboredo, F H; Ribeiro-Barros, Ana I

2018-01-01

The understanding of acclimation strategies to low temperature and water availability is decisive to ensure coffee crop sustainability, since these environmental conditions determine the suitability of cultivation areas. In this context, the impacts of single and combined exposure to drought and cold were evaluated in three genotypes of the two major cropped species, Coffea arabica cv. Icatu, Coffea canephora cv. Apoatã, and the hybrid Obatã. Crucial traits of plant resilience to environmental stresses have been examined: photosynthesis, lipoperoxidation and the antioxidant response. Drought and/or cold promoted leaf dehydration, which was accompanied by stomatal and mesophyll limitations that impaired leaf C-assimilation in all genotypes. However, Icatu showed a lower impact upon stress exposure and a faster and complete photosynthetic recovery. Although lipoperoxidation was increased by drought (Icatu) and cold (all genotypes), it was greatly reduced by stress interaction, especially in Icatu. In fact, although the antioxidative system was reinforced under single drought and cold exposure (e.g., activity of enzymes as Cu,Zn-superoxide dismutase, ascorbate peroxidase, APX, glutathione reductase and catalase, CAT), the stronger increases were observed upon the simultaneous exposure to both stresses, which was accompanied with a transcriptional response of some genes, namely related to APX. Complementary, non-enzyme antioxidant molecules were promoted mostly by cold and the stress interaction, including α-tocopherol (in C. arabica plants), ascorbate (ASC), zeaxanthin, and phenolic compounds (all genotypes). In general, drought promoted antioxidant enzymes activity, whereas cold enhanced the synthesis of both enzyme and non-enzyme antioxidants, the latter likely related to a higher need of antioxidative capability when enzyme reactions were probably quite repressed by low temperature. Icatu showed the wider antioxidative capability, with the triggering of all

RNA-seq Analysis of Cold and Drought Responsive Transcriptomes of Zea mays ssp. mexicana L.

PubMed

Lu, Xiang; Zhou, Xuan; Cao, Yu; Zhou, Meixue; McNeil, David; Liang, Shan; Yang, Chengwei

2017-01-01

The annual Zea mays ssp. mexicana L. is a member of teosinte, a wild relative of the Zea mays spp. mays L. This subspecies has strong growth and regeneration ability, high tiller numbers, high protein and lysine content as well as resistance to many fungal diseases, and it can be effectively used in maize improvement. In this study, we reported a Zea mays ssp. mexicana L. transcriptome by merging data from untreated control (CK), cold (4°C) and drought (PEG2000, 20%) treated plant samples. A total of 251,145 transcripts (N50 = 1,269 bp) and 184,280 unigenes (N50 = 923 bp) were predicted, which code for homologs of near 47% of the published maize proteome. Under cold conditions, 2,232 and 817 genes were up-regulated and down-regulated, respectively, while fewer genes were up-regulated (532) and down-regulated (82) under drought stress, indicating that Zea mays ssp. mexicana L. is more sensitive to the applied cold rather than to the applied drought stresses. Functional enrichment analyses identified many common or specific biological processes and gene sets in response to drought and cold stresses. The ABA dependent pathway, trehalose synthetic pathway and the ICE1-CBF pathway were up-regulated by both stresses. GA associated genes have been shown to differentially regulate the responses to cold in close subspecies in Zea mays . These findings and the identified functional genes can provide useful clues for improving abiotic stress tolerance of maize.

RNA-seq Analysis of Cold and Drought Responsive Transcriptomes of Zea mays ssp. mexicana L.

PubMed Central

Lu, Xiang; Zhou, Xuan; Cao, Yu; Zhou, Meixue; McNeil, David; Liang, Shan; Yang, Chengwei

2017-01-01

The annual Zea mays ssp. mexicana L. is a member of teosinte, a wild relative of the Zea mays spp. mays L. This subspecies has strong growth and regeneration ability, high tiller numbers, high protein and lysine content as well as resistance to many fungal diseases, and it can be effectively used in maize improvement. In this study, we reported a Zea mays ssp. mexicana L. transcriptome by merging data from untreated control (CK), cold (4°C) and drought (PEG2000, 20%) treated plant samples. A total of 251,145 transcripts (N50 = 1,269 bp) and 184,280 unigenes (N50 = 923 bp) were predicted, which code for homologs of near 47% of the published maize proteome. Under cold conditions, 2,232 and 817 genes were up-regulated and down-regulated, respectively, while fewer genes were up-regulated (532) and down-regulated (82) under drought stress, indicating that Zea mays ssp. mexicana L. is more sensitive to the applied cold rather than to the applied drought stresses. Functional enrichment analyses identified many common or specific biological processes and gene sets in response to drought and cold stresses. The ABA dependent pathway, trehalose synthetic pathway and the ICE1-CBF pathway were up-regulated by both stresses. GA associated genes have been shown to differentially regulate the responses to cold in close subspecies in Zea mays. These findings and the identified functional genes can provide useful clues for improving abiotic stress tolerance of maize. PMID:28223998

Stress cross-response of the antioxidative system promoted by superimposed drought and cold conditions in Coffea spp.

PubMed Central

Rodrigues, Ana P.; Lidon, Fernando C.; Marques, Luís M. C.; Leitão, A. Eduardo; Fortunato, Ana S.; Pais, Isabel P.; Silva, Maria J.; Scotti-Campos, Paula; Lopes, António; Reboredo, F. H.; Ribeiro-Barros, Ana I.

2018-01-01

The understanding of acclimation strategies to low temperature and water availability is decisive to ensure coffee crop sustainability, since these environmental conditions determine the suitability of cultivation areas. In this context, the impacts of single and combined exposure to drought and cold were evaluated in three genotypes of the two major cropped species, Coffea arabica cv. Icatu, Coffea canephora cv. Apoatã, and the hybrid Obatã. Crucial traits of plant resilience to environmental stresses have been examined: photosynthesis, lipoperoxidation and the antioxidant response. Drought and/or cold promoted leaf dehydration, which was accompanied by stomatal and mesophyll limitations that impaired leaf C-assimilation in all genotypes. However, Icatu showed a lower impact upon stress exposure and a faster and complete photosynthetic recovery. Although lipoperoxidation was increased by drought (Icatu) and cold (all genotypes), it was greatly reduced by stress interaction, especially in Icatu. In fact, although the antioxidative system was reinforced under single drought and cold exposure (e.g., activity of enzymes as Cu,Zn-superoxide dismutase, ascorbate peroxidase, APX, glutathione reductase and catalase, CAT), the stronger increases were observed upon the simultaneous exposure to both stresses, which was accompanied with a transcriptional response of some genes, namely related to APX. Complementary, non-enzyme antioxidant molecules were promoted mostly by cold and the stress interaction, including α-tocopherol (in C. arabica plants), ascorbate (ASC), zeaxanthin, and phenolic compounds (all genotypes). In general, drought promoted antioxidant enzymes activity, whereas cold enhanced the synthesis of both enzyme and non-enzyme antioxidants, the latter likely related to a higher need of antioxidative capability when enzyme reactions were probably quite repressed by low temperature. Icatu showed the wider antioxidative capability, with the triggering of all

A banana aquaporin gene, MaPIP1;1, is involved in tolerance to drought and salt stresses

PubMed Central

2014-01-01

Background Aquaporin (AQP) proteins function in transporting water and other small molecules through the biological membranes, which is crucial for plants to survive in drought or salt stress conditions. However, the precise role of AQPs in drought and salt stresses is not completely understood in plants. Results In this study, we have identified a PIP1 subfamily AQP (MaPIP1;1) gene from banana and characterized it by overexpression in transgenic Arabidopsis plants. Transient expression of MaPIP1;1-GFP fusion protein indicated its localization at plasma membrane. The expression of MaPIP1;1 was induced by NaCl and water deficient treatment. Overexpression of MaPIP1;1 in Arabidopsis resulted in an increased primary root elongation, root hair numbers and survival rates compared to WT under salt or drought conditions. Physiological indices demonstrated that the increased salt tolerance conferred by MaPIP1;1 is related to reduced membrane injury and high cytosolic K+/Na+ ratio. Additionally, the improved drought tolerance conferred by MaPIP1;1 is associated with decreased membrane injury and improved osmotic adjustment. Finally, reduced expression of ABA-responsive genes in MaPIP1;1-overexpressing plants reflects their improved physiological status. Conclusions Our results demonstrated that heterologous expression of banana MaPIP1;1 in Arabidopsis confers salt and drought stress tolerances by reducing membrane injury, improving ion distribution and maintaining osmotic balance. PMID:24606771

Plasticity and stress tolerance override local adaptation in the responses of Mediterranean holm oak seedlings to drought and cold.

PubMed

Gimeno, Teresa E; Pías, Beatriz; Lemos-Filho, José P; Valladares, Fernando

2009-01-01

Plant populations of widely distributed species experience a broad range of environmental conditions that can be faced by phenotypic plasticity or ecotypic differentiation and local adaptation. The strategy chosen will determine a population's ability to respond to climate change. To explore this, we grew Quercus ilex (L.) seedlings from acorns collected at six selected populations from climatically contrasting localities and evaluated their response to drought and late season cold events. Maximum photosynthetic rate (A(max)), instantaneous water use efficiency (iWUE), and thermal tolerance to freeze and heat (estimated from chlorophyll fluorescence versus temperature curves) were measured in 5-month-old seedlings in control (no stress), drought (water-stressed), and cold (low suboptimal temperature) conditions. The observed responses were similar for the six populations: drought decreased A(max) and increased iWUE, and cold reduced A(max) and iWUE. All the seedlings maintained photosynthetic activity under adverse conditions (drought and cold), and rapidly increased their iWUE by closing stomata when exposed to drought. Heat and freeze tolerances were similarly high for seedlings from all the populations, and they were significantly increased by drought and cold, respectively; and were positively related to each other. Differences in seedling performance across populations were primarily induced by maternal effects mediated by seed size and to a lesser extent by idiosyncratic physiologic responses to drought and low temperatures. Tolerance to multiple stresses together with the capacity to physiologically acclimate to heat waves and cold snaps may allow Q. ilex to cope with the increasingly stressful conditions imposed by climate change. Lack of evidence of physiologic seedling adaptation to local climate may reflect opposing selection pressures to complex, multidimensional environmental conditions operating within the distribution range of this species.

Suppression of Arabidopsis RING E3 ubiquitin ligase AtATL78 increases tolerance to cold stress and decreases tolerance to drought stress.

PubMed

Kim, Soo Jin; Kim, Woo Taek

2013-08-19

AtATL78 is an Arabidopsis RING E3 ubiquitin ligase. RT-PCR and promoter-GUS assays revealed that AtATL78 was up-regulated by cold stress and down-regulated by drought. AtATL78 was localized at the plasma-membrane. Suppression of AtATL78 increased tolerance to cold stress but decreased tolerance to drought. Our data suggests that AtATL78 is a negative regulator of cold stress response and a positive regulator of drought stress response in Arabidopsis. These results further suggest that AtATL78 plays opposing roles in cold and drought stress responses. Copyright © 2013 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Numerical study of cold filling and tube deformation in the molten salt receiver

NASA Astrophysics Data System (ADS)

Xu, Tingting; Zhang, Gongchen; Peniguel, Christophe; Liao, Zhirong; Li, Xin; Lu, Jiahui; Wang, Zhifeng

2017-06-01

Molten salt tube cold filling is one way to accelerate the startup of molten salt Concentrated Solar Power (CSP) plant. This practical operation may induce salt solidification and large thermal stress due to tube's large temperature difference. This paper presents the cold filling study and the induced thermal stress quantitatively through simulation approaches. Physical mechanisms and safe working criteria are identified under certain conditions.

Basic leucine zipper transcription factor SlbZIP1 mediates salt and drought stress tolerance in tomato.

PubMed

Zhu, Mingku; Meng, Xiaoqing; Cai, Jing; Li, Ge; Dong, Tingting; Li, Zongyun

2018-05-08

Basic region/leucine zipper (bZIP) transcription factors perform as crucial regulators in ABA-mediated stress response in plants. Nevertheless, the functions for most bZIP family members in tomato remain to be deciphered. Here we examined the functional characterization of SlbZIP1 under salt and drought stresses in tomato. Silencing of SlbZIP1 in tomato resulted in reduced expression of multiple ABA biosynthesis- and signal transduction-related genes in transgenic plants. In stress assays, SlbZIP1-RNAi transgenic plants exhibited reduced tolerance to salt and drought stresses compared with WT plants, as are evaluated by multiple physiological parameters associated with stress responses, such as decreased ABA, chlorophyll contents and CAT activity, and increased MDA content. In addition, RNA-seq analysis of transgenic plants revealed that the transcription levels of multiple genes encoding defense proteins related to responses to abiotic stress (e.g. endochitinase, peroxidases, and lipid transfer proteins) and biotic stress (e.g. pathogenesis-related proteins) were downregulated in SlbZIP1-RNAi plants, suggesting that SlbZIP1 plays a role in regulating the genes related to biotic and abiotic stress response. Collectively, the data suggest that SlbZIP1 exerts an essential role in salt and drought stress tolerance through modulating an ABA-mediated pathway, and SlbZIP1 may hold potential applications in the engineering of salt- and drought-tolerant tomato cultivars.

Overexpression of GmFDL19 enhances tolerance to drought and salt stresses in soybean

PubMed Central

Li, Xiaoming; Lu, Sijia; Zhao, Xiaohui; Liu, Baohui; Guo, Changhong; Kong, Fanjiang

2017-01-01

The basic leucine zipper (bZIP) family of transcription factors plays an important role in the growth and developmental process as well as responds to various abiotic stresses, such as drought and high salinity. Our previous work identified GmFDL19, a bZIP transcription factor, as a flowering promoter in soybean, and the overexpression of GmFDL19 caused early flowering in transgenic soybean plants. Here, we report that GmFDL19 also enhances tolerance to drought and salt stress in soybean. GmFDL19 was determined to be a group A member, and its transcription expression was highly induced by abscisic acid (ABA), polyethylene glycol (PEG 6000) and high salt stresses. Overexpression of GmFDL19 in soybean enhanced drought and salt tolerance at the seedling stage. The relative plant height (RPH) and relative shoot dry weight (RSDW) of transgenic plants were significantly higher than those of the WT after PEG and salt treatments. In addition, the germination rate and plant height of the transgenic soybean were also significantly higher than that of WT plants after various salt treatments. Furthermore, we also found that GmFDL19 could reduce the accumulation of Na+ ion content and up-regulate the expression of several ABA/stress-responsive genes in transgenic soybean. We also found that GmFDL19 overexpression increased the activities of several antioxidative enzyme and chlorophyll content but reduced malondialdehyde content. These results suggested that GmFDL19 is involved in soybean abiotic stress responses and has potential utilization to improve multiple stress tolerance in transgenic soybean. PMID:28640834

Transcriptional Modulation of Ethylene Response Factor Protein JERF3 in the Oxidative Stress Response Enhances Tolerance of Tobacco Seedlings to Salt, Drought, and Freezing1[C][W][OA

PubMed Central

Wu, Lijun; Zhang, Zhijin; Zhang, Haiwen; Wang, Xue-Chen; Huang, Rongfeng

2008-01-01

Abiotic stresses such as drought, cold, and salinity affect normal growth and development in plants. The production and accumulation of reactive oxygen species (ROS) cause oxidative stress under these abiotic conditions. Recent research has elucidated the significant role of ethylene response factor (ERF) proteins in plant adaptation to abiotic stresses. Our earlier functional analysis of an ERF protein, JERF3, indicated that JERF3-expressing tobacco (Nicotiana tabacum) adapts better to salinity in vitro. This article extends that study by showing that transcriptional regulation of JERF3 in the oxidative stress response modulates the increased tolerance to abiotic stresses. First, we confirm that JERF3-expressing tobacco enhances adaptation to drought, freezing, and osmotic stress during germination and seedling development. Then we demonstrate that JERF3-expressing tobacco imparts not only higher expression of osmotic stress genes compared to wild-type tobacco, but also the activation of photosynthetic carbon assimilation/metabolism and oxidative genes. More importantly, this regulation of the expression of oxidative genes subsequently enhances the activities of superoxide dismutase but reduces the content of ROS in tobacco under drought, cold, salt, and abscisic acid treatments. This indicates that JERF3 also modulates the abiotic stress response via the regulation of the oxidative stress response. Further assays indicate that JERF3 activates the expression of reporter genes driven by the osmotic-responsive GCC box, DRE, and CE1 and by oxidative-responsive as-1 in transient assays, suggesting the transcriptional activation of JERF3 in the expression of genes involved in response to oxidative and osmotic stress. Our results therefore establish that JERF3 activates the expression of such genes through transcription, resulting in decreased accumulation of ROS and, in turn, enhanced adaptation to drought, freezing, and salt in tobacco. PMID:18945933

Salt and drought stress and ABA responses related to bZIP genes from V. radiata and V. angularis.

PubMed

Wang, Lanfen; Zhu, Jifeng; Li, Xiaoming; Wang, Shumin; Wu, Jing

2018-04-20

Mung bean and adzuki bean are warm-season legumes widely cultivated in China. However, bean production in major producing regions is limited by biotic and abiotic stress, such as drought and salt stress. Basic leucine zipper (bZIP) genes play key roles in responses to various biotic and abiotic stresses. However, only several bZIP genes involved in drought and salt stress in legumes, especially Vigna radiata and Vigna angularis, have been identified. In this study, we identified 54 and 50 bZIP proteins from whole-genome sequences of V. radiata and V. angularis, respectively. First, we comprehensively surveyed the characteristics of all bZIP genes, including their gene structure, chromosome distribution and motif composition. Phylogenetic trees showed that VrbZIP and VabZIP proteins were divided into ten clades comprising nine known and one unknown subgroup. The results of the nucleotide substitution rate of the orthologous gene pairs showed that bZIP proteins have undergone strong purifying selection: V. radiata and V. angularis diverged 1.25 million years ago (mya) to 9.20 mya (average of 4.95 mya). We also found that many cis-acting regulatory elements (CAREs) involved in abiotic stress and plant hormone responses were detected in the putative promoter regions of the bZIP genes. Finally, using the quantitative real-time PCR (qRT-PCR) method, we performed expression profiling of the bZIP genes in response to drought, salt and abscisic acid (ABA). We identified several bZIP genes that may be involved in drought and salt responses. Generally, our results provided useful and rich resources of VrbZIP and VabZIP genes for the functional characterization and understanding of bZIP transcription factors (TFs) in warm-season legumes. In addition, our results revealed important and interesting data - a subset of VrbZIP and VabZIP gene expression profiles in response to drought, salt and ABA stress. These results provide gene expression evidence for the selection of

Identification of Rapeseed MicroRNAs Involved in Early Stage Seed Germination under Salt and Drought Stresses

PubMed Central

Jian, Hongju; Wang, Jia; Wang, Tengyue; Wei, Lijuan; Li, Jiana; Liu, Liezhao

2016-01-01

Drought and salinity are severe and wide-ranging abiotic stresses that substantially affect crop germination, development and productivity, and seed germination is the first critical step in plant growth and development. To comprehensively investigate small-RNA targets and improve our understanding of miRNA-mediated post-transcriptional regulation networks during Brassica napus seed imbibition under drought and salt stresses, we constructed three small-RNA libraries from B. napus variety ZS11 embryos exposed to salt (200 mM NaCl, denoted “S”), drought (200 g L−1 PEG-6000, denoted “D”), and distilled water (denoted “CK”) during imbibition and sequenced them using an Illumina Genome Analyzer. A total of 11,528,557, 12,080,081, and 12,315,608 raw reads were obtained from the CK, D, and S libraries, respectively. Further analysis identified 85 known miRNAs belonging to 31 miRNA families and 882 novel miRNAs among the three libraries. Comparison of the D and CK libraries revealed significant down-regulation of six miRNA families, miR156, miR169, miR860, miR399, miR171, and miR395, whereas only miR172 was significantly up-regulated. In contrast, comparison of the S library with the CK library showed significant down-regulation of only two miRNA families: miRNA393 and miRNA399. Putative targets for 336, 376, and 340 novel miRNAs were successfully predicted in the CK, D, and S libraries, respectively, and 271 miRNA families and 20 target gene families [including disease resistance protein (DIRP), drought-responsive family protein (DRRP), early responsive to dehydration stress protein (ERD), stress-responsive alpha-beta barrel domain protein (SRAP), and salt tolerance homolog2 (STH2)] were confirmed as being core miRNAs and genes involved in the seed imbibition response to salt and drought stresses. The sequencing results were partially validated by quantitative RT-PCR for both conserved and novel miRNAs as well as the predicted target genes. Our data suggest

Large-eddy simulations of a Salt Lake Valley cold-air pool

NASA Astrophysics Data System (ADS)

Crosman, Erik T.; Horel, John D.

2017-09-01

Persistent cold-air pools are often poorly forecast by mesoscale numerical weather prediction models, in part due to inadequate parameterization of planetary boundary-layer physics in stable atmospheric conditions, and also because of errors in the initialization and treatment of the model surface state. In this study, an improved numerical simulation of the 27-30 January 2011 cold-air pool in Utah's Great Salt Lake Basin is obtained using a large-eddy simulation with more realistic surface state characterization. Compared to a Weather Research and Forecasting model configuration run as a mesoscale model with a planetary boundary-layer scheme where turbulence is highly parameterized, the large-eddy simulation more accurately captured turbulent interactions between the stable boundary-layer and flow aloft. The simulations were also found to be sensitive to variations in the Great Salt Lake temperature and Salt Lake Valley snow cover, illustrating the importance of land surface state in modelling cold-air pools.

Arbuscular mycorrhizal fungi alleviate boron toxicity in Puccinellia tenuiflora under the combined stresses of salt and drought.

PubMed

Liu, Chunguang; Dai, Zheng; Cui, Mengying; Lu, Wenkai; Sun, Hongwen

2018-05-11

To investigate the effect of arbuscular mycorrhizal fungi (AMF) on boron (B) toxicity in plants under the combined stresses of salt and drought, Puccinellia tenuiflora was grown in the soil with the inoculation of Funneliformis mosseae and Claroideoglomus etunicatum. After three weeks of treatment, the plants were harvested to determine mycorrhizal colonization rates, plant biomass, as well as tissue B, phosphorus, sodium, and potassium concentrations. The results show that the combined stresses reduced mycorrhizal colonization. Mycorrhizal inoculation significantly increased plant biomass while reduced shoot B concentrations. Mycorrhizal inoculation also slightly increased shoot phosphorus and potassium concentrations, and reduced shoot sodium concentrations. F. mosseae and C. etunicatum were able to alleviate the combined stresses of B, salt, and drought. The two fungal species and their combination showed no significant difference in the alleviation of B toxicity. It is inferred that AMF is able to alleviate B toxicity in P. tenuiflora by increasing biomass and reducing tissue B concentrations. The increase in plant phosphorus and potassium, as well as the decrease in sodium accumulation that induced by AMF, can help plant tolerate the combined stresses of salt and drought. Our findings suggest that F. mosseae and C. etunicatum are potential candidates for facilitating the phytoremediation of B-contaminated soils with salt and drought stress. Copyright © 2018 Elsevier Ltd. All rights reserved.

The ERF transcription factor TaERF3 promotes tolerance to salt and drought stresses in wheat.

PubMed

Rong, Wei; Qi, Lin; Wang, Aiyun; Ye, Xingguo; Du, Lipu; Liang, Hongxia; Xin, Zhiyong; Zhang, Zengyan

2014-05-01

Salinity and drought are major limiting factors of wheat (Triticum aestivum) productivity worldwide. Here, we report the function of a wheat ERF transcription factor TaERF3 in salt and drought responses and the underlying mechanism of TaERF3 function. Upon treatment with 250 mM NaCl or 20% polyethylene glycol (PEG), transcript levels of TaERF3 were rapidly induced in wheat. Using wheat cultivar Yangmai 12 as the transformation recipient, four TaERF3-overexpressing transgenic lines were generated and functionally characterized. The seedlings of the TaERF3-overexpressing transgenic lines exhibited significantly enhanced tolerance to both salt and drought stresses as compared to untransformed wheat. In the leaves of TaERF3-overexpressing lines, accumulation levels of both proline and chlorophyll were significantly increased, whereas H₂O₂ content and stomatal conductance were significantly reduced. Conversely, TaERF3-silencing wheat plants that were generated through virus-induced gene silencing method displayed more sensitivity to salt and drought stresses compared with the control plants. Real-time quantitative RT-PCR analyses showed that transcript levels of ten stress-related genes were increased in TaERF3-overexpressing lines, but compromised in TaERF3-silencing wheat plants. Electrophoretic mobility shift assays showed that the TaERF3 protein could interact with the GCC-box cis-element present in the promoters of seven TaERF3-activated stress-related genes. These results indicate that TaERF3 positively regulates wheat adaptation responses to salt and drought stresses through the activation of stress-related genes and that TaERF3 is an attractive engineering target in applied efforts to improve abiotic stress tolerances in wheat and other cereals. © 2014 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Co-transforming bar and CsLEA enhanced tolerance to drought and salt stress in transgenic alfalfa (Medicago sativa L.).

PubMed

Zhang, Jiyu; Duan, Zhen; Zhang, Daiyu; Zhang, Jianquan; Di, Hongyan; Wu, Fan; Wang, Yanrong

2016-03-25

Drought and high salinity are two major abiotic factors that restrict alfalfa productivity. A dehydrin protein, CsLEA, from the desert grass Cleistogenes songorica was transformed into alfalfa (Medicago sativa L.) via Agrobacterium-mediated transformation using the bar gene as a selectable marker, and the drought and salt stress tolerances of the transgenic plants were assessed. Thirty-nine of 119 transformants were positive, as screened by Basta, and further molecularly authenticated using PCR and RT-PCR. Phenotype observations revealed that the transgenic plants grew better than the wild-type (WT) plants after 15d of drought stress and 10d of salt stress: the leaves of WT alfalfa turned yellow, whereas the transgenic alfalfa leaves only wilted; after rewatering, the transgenic plants returned to a normal state, though the WT plants could not be restored. Evaluation of physiologic and biochemical indices during drought and salt stresses showed a relatively lower Na(+) content in the leaves of the transgenic plants, which would reduce toxic ion effects. In addition, the transgenic plants were able to maintain a higher relative water content (RWC), higher shoot biomass, fewer photosystem changes, decreased membrane injury, and a lower level of osmotic stress injury. These results demonstrate that overexpression of the CsLEA gene can enhance the drought and salt tolerance of transgenic alfalfa; in addition, carrying the bar gene in the genome may increase herbicide resistance. Copyright © 2016 Elsevier Inc. All rights reserved.

Further evidence that a terminal drought tolerance QTL of pearl millet is associated with reduced salt uptake

PubMed Central

Sharma, Parbodh C.; Singh, Dhananjay; Sehgal, Deepmala; Singh, Gurbachan; Hash, C.T.; Yadav, Rattan S.

2014-01-01

Earlier, we established that a major drought tolerance QTL on linkage group 2 of pearl millet is also associated with reduced salt uptake and enhanced growth under salt stress. Present study was undertaken to re-assess the performance of drought tolerant (PRLT 2/89-33) and drought sensitive (H 77/833-2) parents along with two QTL-NILs (ICMR 01029 and ICMR 01040), under salinity stress specifically imposed during post-flowering growth stages when plants had developed their ion sinks in full. Time course changes in ionic accumulation and their compartmentalization in different plant parts was studied, specifically to monitor and capture changes conferred by the two alleles at this QTL, at small intervals. Amongst different plant parts, higher accumulation of toxic ion Na+ was recorded in roots. Further, the Na+ concentration in roots of the testcross hybrid of the drought-sensitive parent (H 77/833-2) reached its maximum at ECiw 15 dS m−1 within 24 h after salinity imposition, whereas it continued to increase with time in the testcross hybrids of the drought tolerant parent PRLT 2/89-33 as well as those of its QTL-NILs (ICMR 01029 and ICMR 01004) and reached at its maximum at 120 h stage. Comparison of differential distribution of toxic ions in individual leaves revealed that Na+ ions were not uniformly distributed in the leaves of the drought-tolerant parent and drought-tolerant QTL-NILs; but accumulated preferentially in the older leaves, whereas the hybrid of the drought-sensitive parent showed significantly higher Na+ concentration in all main stem leaves irrespective of their age. Dynamics of chlorophyll and proline concentration variation studied under salt stress at late flowering stages revealed a greater reduction, almost twice, in both leaf chlorophyll and proline concentrations in younger leaves in the hybrids of the sensitive parent as compared to the tolerant parent and QTL NILs. Imposition of salinity stress even at flowering stage affected the

SlCOR413IM1: A novel cold-regulation gene from tomato, enhances drought stress tolerance in tobacco.

PubMed

Ma, Xiaocui; Wang, Guodong; Zhao, Weiyang; Yang, Minmin; Ma, Nana; Kong, Fanying; Dong, Xinchun; Meng, Qingwei

2017-09-01

Drought stress adversely affects plant growth, development, and productivity. Genes functioning in plant response to drought stress are essential for drought tolerance. In this study, SlCOR413IM1, a cold-regulated gene isolated from Solanum lycopersium, was transferred to Nicotiana tabacum to investigate its function under drought stress. The subcellular localisation of SlCOR413IM1-GFP fusion protein in Arabidopsis protoplasts suggested that SlCOR413IM1 is a chloroplast protein. Expression analyses revealed that SlCOR413IM1 responded to drought and cold stresses. Under drought stress, transgenic plants maintained the high maximum photochemical efficiency, net photosynthetic rate (Pn) and D1 protein content of photosystem II (PSII). Compared with wild-type (WT) plants, transgenic plants showed higher superoxide dismutase (SOD) and ascorbate peroxidase (APX) activities and proline and soluble sugar content, which reduced reactive oxygen species (ROS) generation. However, the high SOD and APX activities in transgenic plants were independent of their transcription levels. Moreover, the transgenic plants exhibited better seed germination, water status and survival, as well as lower malondialdehyde (MDA) content and relative electrical conductivity (REC) than WT plants under drought stress. Taken together, these data demonstrated that overexpression of SlCOR413IM1 enhanced drought stress tolerance in transgenic tobacco. Copyright © 2017. Published by Elsevier GmbH.

Elucidation of Cross-Talk and Specificity of Early Response Mechanisms to Salt and PEG-Simulated Drought Stresses in Brassica napus Using Comparative Proteomic Analysis

PubMed Central

Luo, Junling; Tang, Shaohua; Peng, Xiaojue; Yan, Xiaohong; Zeng, Xinhua; Li, Jun; Li, Xiaofei; Wu, Gang

2015-01-01

To understand the cross-talk and specificity of the early responses of plants to salt and drought, we performed physiological and proteome analyses of Brassica napus seedlings pretreated with 245 mM NaCl or 25% polyethylene glycol (PEG) 6000 under identical osmotic pressure (-1.0 MPa). Significant decreases in water content and photosynthetic rate and excessive accumulation of compatible osmolytes and oxidative damage were observed in response to both stresses. Unexpectedly, the drought response was more severe than the salt response. We further identified 45 common differentially expressed proteins (DEPs), 143 salt-specific DEPs and 160 drought-specific DEPs by isobaric tags for relative and absolute quantitation (iTRAQ) analysis. The proteome quantitative data were then confirmed by multiple reaction monitoring (MRM). The differences in the proteomic profiles between drought-treated and salt-treated seedlings exceeded the similarities in the early stress responses. Signal perception and transduction, transport and membrane trafficking, and photosynthesis-related proteins were enriched as part of the molecular cross-talk and specificity mechanism in the early responses to the two abiotic stresses. The Ca2+ signaling, G protein-related signaling, 14-3-3 signaling pathway and phosphorylation cascades were the common signal transduction pathways shared by both salt and drought stress responses; however, the proteins with executive functions varied. These results indicate functional specialization of family proteins in response to different stresses, i.e., CDPK21, TPR, and CTR1 specific to phosphorylation cascades under early salt stress, whereas STN7 and BSL were specific to phosphorylation cascades under early drought stress. Only the calcium-binding EF-hand family protein and ZKT were clearly identified as signaling proteins that acted as cross-talk nodes for salt and drought signaling pathways. Our study provides new clues and insights for developing strategies to

Comparative proteomic analysis of alfalfa revealed new salt and drought stress-related factors involved in seed germination.

PubMed

Ma, Qiaoli; Kang, Junmei; Long, Ruicai; Zhang, Tiejun; Xiong, Junbo; Zhang, Kun; Wang, Tenghua; Yang, Qingchuan; Sun, Yan

2017-07-01

Salinity and drought are two major environmental factors that limit the growth and yield of many forage crops in semi-arid and arid regions. Alfalfa (Medicago sativa L.) is one of the most important forage crops in many countries. We aim to investigate the molecular mechanisms of alfalfa in response to salt and drought stresses in this study. Physiological and proteomic analyses were applied to examine the Zhongmu NO.3 alfalfa seed germination stage with 200 mM NaCl and 180 g·L -1 polyethylene glycol (PEG) treatments. The germination ability of the seed and the accumulation of osmotic solutes were quite different between the NaCl and PEG treatments. More than 800 protein spots were detected by proteomics technology on two-dimensional electrophoresis (2-DE) gels. The abundance of twenty-eight proteins were decreased or increased after salt and drought stress. Seventeen of these proteins were identified and classified into six functional categories through mass spectrometry (MS). The six groups involved in salt- and PEG-mediated stress included defense response, energy metabolism, protein synthesis and degradation, oxidative stress, carbohydrate metabolism-associated proteins, and unknown proteins. We discovered that some proteins related to carbohydrate metabolism and energy production increased in abundance under salt- and PEG-mediated drought stress. This demonstrates a common mechanism of energy consumption during abiotic stresses. Further study of these proteins with unknown function will provide insights into the molecular mechanisms of abiotic stress and the discovery of new candidate markers.

Effects of cold plasma treatment on alfalfa seed growth under simulated drought stress

NASA Astrophysics Data System (ADS)

Jinkui, FENG; Decheng, WANG; Changyong, SHAO; Lili, ZHANG; Xin, TANG

2018-03-01

The effect of different cold plasma treatments on the germination and seedling growth of alfalfa (Medicago sativa L.) seeds under simulated drought stress conditions was investigated. Polyethyleneglycol-6000 (PEG 6000)with the mass fraction of 0% (purified water), 5%, 10%, and 15% were applied to simulate the drought environment. The alfalfa seeds were treated with 15 different power levels ranged between 0-280 W for 15 s. The germination potential, germination rate, germination index, seedling root length, seedling height, and vigor index were investigated. Results indicated significant differences between treated with proper power and untreated alfalfa seeds. With the increase of treatment power, these indexes mentioned above almost presented bimodal curves. Under the different mass fractions of PEG 6000, results showed that the lower power led to increased germination, and the seedlings presented good adaptability to different drought conditions. Meanwhile, higher power levels resulted in a decreased germination rate. Seeds treated with 40 W resulted in higher germination potential, germination rate, seedling height, root length, and vigor index. Vigor indexes of the treated seeds under different PEG 6000 stresses increased by 38.68%, 43.91%, 74.34%, and 39.20% respectively compared to CK0-0, CK5-0, CK10-0, and CK15-0 (the control sample under 0%, 5%, 10%, and 15% PEG 6000). Therefore, 40 W was regarded as the best treatment in this research. Although the trend indexes of alfalfa seeds treated with the same power were statistically the same under different PEG 6000 stresses, the cold plasma treatment had a significant effect on the adaptability of alfalfa seeds in different drought environments. Thus, this kind of treatment is worth implementing to promote seed growth under drought situations.

Global Transcriptional Analysis Reveals the Complex Relationship between Tea Quality, Leaf Senescence and the Responses to Cold-Drought Combined Stress in Camellia sinensis

PubMed Central

Zheng, Chao; Wang, Yu; Ding, Zhaotang; Zhao, Lei

2016-01-01

In field conditions, especially in arid and semi-arid areas, tea plants are often simultaneously exposed to various abiotic stresses such as cold and drought, which have profound effects on leaf senescence process and tea quality. However, most studies of gene expression in stress responses focus on a single inciting agent, and the confounding effect of multiple stresses on crop quality and leaf senescence remain unearthed. Here, global transcriptome profiles of tea leaves under separately cold and drought stress were compared with their combination using RNA-Seq technology. This revealed that tea plants shared a large overlap in unigenes displayed “similar” (26%) expression pattern and avoid antagonistic responses (lowest level of “prioritized” mode: 0%) to exhibit very congruent responses to co-occurring cold and drought stress; 31.5% differential expressed genes and 38% of the transcriptome changes in response to combined stresses were unpredictable from cold or drought single-case studies. We also identified 319 candidate genes for enhancing plant resistance to combined stress. We then investigated the combined effect of cold and drought on tea quality and leaf senescence. Our results showed that drought-induced leaf senescence were severely delayed by (i) modulation of a number of senescence-associated genes and cold responsive genes, (ii) enhancement of antioxidant capacity, (iii) attenuation of lipid degradation, (iv) maintenance of cell wall and photosynthetic system, (v) alteration of senescence-induced sugar effect/sensitivity, as well as (vi) regulation of secondary metabolism pathways that significantly influence the quality of tea during combined stress. Therefore, care should be taken when utilizing a set of stresses to try and maximize leaf longevity and tea quality. PMID:28018394

The SlNAC8 gene of the halophyte Suaeda liaotungensis enhances drought and salt stress tolerance in transgenic Arabidopsis thaliana.

PubMed

Wu, Dandan; Sun, Yinghao; Wang, Hongfei; Shi, He; Su, Mingxing; Shan, Hongyan; Li, Tongtong; Li, Qiuli

2018-07-01

NAC (NAM, ATAF1/2 and CUC) transcription factors play an important role in resisting abiotic stress in plants. In this study, a novel NAC gene, designated SlNAC8 from Suaeda liaotungensis K. was characterized. SlNAC8 protein is localized in the nucleus, and the yeast one-hybrid screening showed that it contains an activation domain in its C-terminus and functions as a transcriptional activator. Gene expression analysis revealed that it is induced by drought and salt stress. Arabidopsis plants overexpressing SlNAC8 demonstrated enhanced tolerance to drought and salt stress, showing significant advantages in seed germination, root growth, shoot growth, and survival rate compared with controls. Moreover, transgenic plants had a significantly higher proline concentration, antioxidant enzyme activity (superoxide dismutase, peroxidase, and catalase), and level of chlorophyll fluorescence than wild-type, and a significantly lower malondialdehyde concentration and electrolyte leakage under drought and salt stress. The overexpression of SlNAC8 in transgenic plants also enhanced the expression of stress-responsive genes such as RD20, GSTF6, COR47, RD29A, RD29B, and NYC1. In summary, SlNAC8, as a transcription factor, may change the physiological-biochemical characteristic of plants by regulating the expression of stress-responsive genes and enhance the drought and salt stress tolerance of plants. SlNAC8 can be utilized for developing drought and salinity tolerance in crop plants through genetic engineering. Copyright © 2018 Elsevier B.V. All rights reserved.

Stress inducible overexpression of AtHDG11 leads to improved drought and salt stress tolerance in peanut (Arachis hypogaea L.)

NASA Astrophysics Data System (ADS)

Banavath, Jayanna N.; Chakradhar, Thammineni; Pandit, Varakumar; Konduru, Sravani; Guduru, Krishna K.; Akila, Chandra S.; Podha, Sudhakar; Puli, Chandra O. R.

2018-03-01

Peanut is an important oilseed and food legume cultivated as a rain-fed crop in semi-arid tropics. Drought and high salinity are the major abiotic stresses limiting the peanut productivity in this region. Development of drought and salt tolerant peanut varieties with improved yield potential using biotechnological approach is highly desirable to improve the peanut productivity in marginal geographies. As abiotic stress tolerance and yield represent complex traits, engineering of regulatory genes to produce abiotic stress-resilient transgenic crops appears to be a viable approach. In the present study, we developed transgenic peanut plants expressing an Arabidopsis homeodomain-leucine zipper transcription factor (AtHDG11) under stress inducible rd29Apromoter. A stress-inducible expression of AtHDG11 in three independent homozygous transgenic peanut lines resulted in improved drought and salt tolerance through up-regulation of known stress responsive genes(LEA, HSP70, Cu/Zn SOD, APX, P5CS, NCED1, RRS5, ERF1, NAC4, MIPS, Aquaporin, TIP, ELIP ) in the stress gene network , antioxidative enzymes, free proline along with improved water use efficiency traits such as longer root system, reduced stomatal density, higher chlorophyll content, increased specific leaf area, improved photosynthetic rates and increased intrinsic instantaneous WUE. Transgenic peanut plants displayed high yield compared to non-transgenic plants under both drought and salt stress conditions. Holistically, our study demonstrates the potentiality of stress-induced expression of AtHDG11 to improve the drought, salt tolerance in peanut.

Soybean DREB1/CBF-type transcription factors function in heat and drought as well as cold stress-responsive gene expression.

PubMed

Kidokoro, Satoshi; Watanabe, Keitaro; Ohori, Teppei; Moriwaki, Takashi; Maruyama, Kyonoshin; Mizoi, Junya; Myint Phyu Sin Htwe, Nang; Fujita, Yasunari; Sekita, Sachiko; Shinozaki, Kazuo; Yamaguchi-Shinozaki, Kazuko

2015-02-01

Soybean (Glycine max) is a globally important crop, and its growth and yield are severely reduced by abiotic stresses, such as drought, heat, and cold. The cis-acting element DRE (dehydration-responsive element)/CRT plays an important role in activating gene expression in response to these stresses. The Arabidopsis DREB1/CBF genes that encode DRE-binding proteins function as transcriptional activators in the cold stress responsive gene expression. In this study, we identified 14 DREB1-type transcription factors (GmDREB1s) from a soybean genome database. The expression of most GmDREB1 genes in soybean was strongly induced by a variety of abiotic stresses, such as cold, drought, high salt, and heat. The GmDREB1 proteins activated transcription via DREs (dehydration-responsive element) in Arabidopsis and soybean protoplasts. Transcriptome analyses using transgenic Arabidopsis plants overexpressing GmDREB1s indicated that many of the downstream genes are cold-inducible and overlap with those of Arabidopsis DREB1A. We then comprehensively analyzed the downstream genes of GmDREB1B;1, which is closely related to DREB1A, using a transient expression system in soybean protoplasts. The expression of numerous genes induced by various abiotic stresses were increased by overexpressing GmDREB1B;1 in soybean, and DREs were the most conserved element in the promoters of these genes. The downstream genes of GmDREB1B;1 included numerous soybean-specific stress-inducible genes that encode an ABA receptor family protein, GmPYL21, and translation-related genes, such as ribosomal proteins. We confirmed that GmDREB1B;1 directly activates GmPYL21 expression and enhances ABRE-mediated gene expression in an ABA-independent manner. These results suggest that GmDREB1 proteins activate the expression of numerous soybean-specific stress-responsive genes under diverse abiotic stress conditions. © 2014 The Authors The Plant Journal © 2014 John Wiley & Sons Ltd.

TaUBA, a UBA domain-containing protein in wheat (Triticum aestivum L.), is a negative regulator of salt and drought stress response in transgenic Arabidopsis.

PubMed

Li, Xiao; Zhang, Shuang-shuang; Ma, Jun-xia; Guo, Guang-yan; Zhang, Xue-yong; Liu, Xu; Bi, Cai-li

2015-05-01

TaUBA functions as a negative regulator of salt and drought stress response in transgenic Arabidopsis, either the UBA domain or the zinc finger domain is crucial for TaUBA's function. TaUBA (DQ211935), which is a UBA domain-containing protein in wheat, was cloned and functionally characterized. Southern blot suggested that TaUBA is a low copy gene in common wheat. qRT-PCR assay showed that the expression of TaUBA was strongly induced by salt and drought stress. When suffering from drought and salt stresses, lower proline content and much higher MDA content in the TaUBA overexpressors were observed than those of the wild-type control, suggesting TaUBA may function as a negative regulator of salt and drought stress response in plants. To study whether the UBA domain or the zinc finger domain affects the function of TaUBA, TaUBAΔUBA (deletion of UBA domain) and TaUBA-M (Cys464Gly and Cys467Gly) overexpression vectors were constructed and transformed into Arabidopsis. Upon drought and salt stresses, the TaUBAΔUBA-and TaUBA-M-overexpressed plants accumulated much more proline and lower MDA than the wild-type control, the TaUBA-overexpressors lost water more quickly than TaUBAΔUBA-and TaUBA-M-overexpressed plants as well as the wild-type control, suggesting that overexpression of TaUBAΔUBA or TaUBA-M improved the drought and salt tolerance of transgenic Arabidopsis plants and the possibility of ubiquitination role in the regulation of osmolyte synthesis and oxidative stress responses in mediating stress tolerance. qRT-PCR assay of stress-related genes in transgenic plants upon drought and salt stresses suggested that TaUBA may function through down-regulating some stress related-transcription factors and by regulating P5CSs to cope with osmotic stress.

SlDEAD31, a Putative DEAD-Box RNA Helicase Gene, Regulates Salt and Drought Tolerance and Stress-Related Genes in Tomato.

PubMed

Zhu, Mingku; Chen, Guoping; Dong, Tingting; Wang, Lingling; Zhang, Jianling; Zhao, Zhiping; Hu, Zongli

2015-01-01

The DEAD-box RNA helicases are involved in almost every aspect of RNA metabolism, associated with diverse cellular functions including plant growth and development, and their importance in response to biotic and abiotic stresses is only beginning to emerge. However, none of DEAD-box genes was well characterized in tomato so far. In this study, we reported on the identification and characterization of two putative DEAD-box RNA helicase genes, SlDEAD30 and SlDEAD31 from tomato, which were classified into stress-related DEAD-box proteins by phylogenetic analysis. Expression analysis indicated that SlDEAD30 was highly expressed in roots and mature leaves, while SlDEAD31 was constantly expressed in various tissues. Furthermore, the expression of both genes was induced mainly in roots under NaCl stress, and SlDEAD31 mRNA was also increased by heat, cold, and dehydration. In stress assays, transgenic tomato plants overexpressing SlDEAD31 exhibited dramatically enhanced salt tolerance and slightly improved drought resistance, which were simultaneously demonstrated by significantly enhanced expression of multiple biotic and abiotic stress-related genes, higher survival rate, relative water content (RWC) and chlorophyll content, and lower water loss rate and malondialdehyde (MDA) production compared to wild-type plants. Collectively, these results provide a preliminary characterization of SlDEAD30 and SlDEAD31 genes in tomato, and suggest that stress-responsive SlDEAD31 is essential for salt and drought tolerance and stress-related gene regulation in plants.

SlbZIP38, a Tomato bZIP Family Gene Downregulated by Abscisic Acid, Is a Negative Regulator of Drought and Salt Stress Tolerance

PubMed Central

Pan, Yanglu; Hu, Xin; Li, Chunyan; Xu, Xing; Su, Chenggang; Li, Jinhua; Song, Hongyuan; Zhang, Xingguo; Pan, Yu

2017-01-01

The basic leucine zipper (bZIP) transcription factors have crucial roles in plant stress responses. In this study, the bZIP family gene SlbZIP38 (GenBank accession No: XM004239373) was isolated from a tomato (Solanum lycopersicum cv. Ailsa Craig) mature leaf cDNA library. The DNA sequence of SlbZIP38 encodes a protein of 484 amino acids, including a highly conserved bZIP DNA-binding domain in the C-terminal region. We found that SlbZIP38 was differentially expressed in various organs of the tomato plant and was downregulated by drought, salt stress, and abscisic acid (ABA). However, overexpression of SlbZIP38 significantly decreased drought and salt stress tolerance in tomatoes (Ailsa Craig). The findings that SlbZIP38 overexpression reduced the chlorophyll and free proline content in leaves but increased the malondialdehyde content may explain the reduced drought and salt tolerance observed in these lines. These results suggest that SlbZIP38 is a negative regulator of drought and salt resistance that acts by modulating ABA signaling. PMID:29261143

NtLTP4, a lipid transfer protein that enhances salt and drought stresses tolerance in Nicotiana tabacum.

PubMed

Xu, Yang; Zheng, Xinxin; Song, Yunzhi; Zhu, Lifei; Yu, Zipeng; Gan, Liming; Zhou, Shumei; Liu, Hongmei; Wen, Fujiang; Zhu, Changxiang

2018-06-11

Lipid transfer proteins (LTPs), a class of small, ubiquitous proteins, play critical roles in various environmental stresses. However, their precise biological functions remain unknown. Here we isolated an extracellular matrix-localised LTP, NtLTP4, from Nicotiana tabacum. The overexpression of NtLTP4 in N. tabacum enhanced resistance to salt and drought stresses. Upon exposure to high salinity, NtLTP4-overexpressing lines (OE lines) accumulated low Na + levels. Salt-responsive genes, including Na + /H + exchangers (NHX1) and high-affinity K + transporter1 (HKT1), were dramatically higher in OE lines than in wild-type lines. NtLTP4 might regulate transcription levels of NHX1 and HKT1 to alleviate the toxicity of Na + . Interestingly, OE lines enhanced the tolerance of N. tabacum to drought stress by reducing the transpiration rate. Moreover, NtLTP4 could increase reactive oxygen species (ROS)-scavenging enzyme activity and expression levels to scavenge excess ROS under drought and high salinity conditions. We used a two-hybrid yeast system and screened seven putative proteins that interact with NtLTP4 in tobacco. An MAPK member, wound-induced protein kinase, was confirmed to interact with NtLTP4 via co-immunoprecipitation and a firefly luciferase complementation imaging assay. Taken together, this is the first functional analysis of NtLTP4, and proves that NtLTP4 positively regulates salt and drought stresses in N. tabacum.

The transcriptional regulatory network in the drought response and its crosstalk in abiotic stress responses including drought, cold, and heat.

PubMed

Nakashima, Kazuo; Yamaguchi-Shinozaki, Kazuko; Shinozaki, Kazuo

2014-01-01

Drought negatively impacts plant growth and the productivity of crops around the world. Understanding the molecular mechanisms in the drought response is important for improvement of drought tolerance using molecular techniques. In plants, abscisic acid (ABA) is accumulated under osmotic stress conditions caused by drought, and has a key role in stress responses and tolerance. Comprehensive molecular analyses have shown that ABA regulates the expression of many genes under osmotic stress conditions, and the ABA-responsive element (ABRE) is the major cis-element for ABA-responsive gene expression. Transcription factors (TFs) are master regulators of gene expression. ABRE-binding protein and ABRE-binding factor TFs control gene expression in an ABA-dependent manner. SNF1-related protein kinases 2, group A 2C-type protein phosphatases, and ABA receptors were shown to control the ABA signaling pathway. ABA-independent signaling pathways such as dehydration-responsive element-binding protein TFs and NAC TFs are also involved in stress responses including drought, heat, and cold. Recent studies have suggested that there are interactions between the major ABA signaling pathway and other signaling factors in stress responses. The important roles of these TFs in crosstalk among abiotic stress responses will be discussed. Control of ABA or stress signaling factor expression can improve tolerance to environmental stresses. Recent studies using crops have shown that stress-specific overexpression of TFs improves drought tolerance and grain yield compared with controls in the field.

Quantitative trait locus mapping of drought and salt tolerance in as introgressed recombinant inbred line population of upland cotton under the greenhouse and feild conditions

USDA-ARS?s Scientific Manuscript database

Drought and salt tolerances are complex traits and controlled by multiple genes, environmental factors and their interactions. Drought and salt stresses can result in more than 50% yield loss in Upland cotton (Gossypium hirsutum L.). G. barbadense L. (the source of Pima cotton) carries desirable tra...

De novo Transcriptome Assembly of a Chinese Locoweed (Oxytropis ochrocephala) Species Provides Insights into Genes Associated with Drought, Salinity, and Cold Tolerance

PubMed Central

He, Wei; Zhuang, Huihui; Fu, Yanping; Guo, Linwei; Guo, Bin; Guo, Lizhu; Zhang, Xiuhong; Wei, Yahui

2015-01-01

Background: Locoweeds (toxic Oxytropis and Astraglus species), containing the toxic agent swainsonine, pose serious threats to animal husbandry on grasslands in both China and the US. Some locoweeds have evolved adaptations in order to resist various stress conditions such as drought, salt and cold. As a result they replace other plants in their communities and become an ecological problem. Currently very limited genetic information of locoweeds is available and this hinders our understanding in the molecular basis of their environmental plasticity, and the interaction between locoweeds and their symbiotic swainsonine producing endophytes. Next-generation sequencing provides a means of obtaining transcriptomic sequences in a timely manner, which is particularly useful for non-model plants. In this study, we performed transcriptome sequencing of Oxytropis ochrocephala plants followed by a de nove assembly. Our primary aim was to provide an enriched pool of genetic sequences of an Oxytropis sp. for further locoweed research. Results: Transcriptomes of four different O. ochrocephala samples, from control (CK) plants, and those that had experienced either drought (20% PEG), salt (150 mM NaCl) or cold (4°C) stress were sequenced using an Illumina Hiseq 2000 platform. From 232,209,506 clean reads 23,220,950,600 (~23 G nucleotides), 182,430 transcripts and 88,942 unigenes were retrieved, with an N50 value of 1237. Differential expression analysis revealed putative genes encoding heat shock proteins (HSPs) and late embryogenesis abundant (LEA) proteins, enzymes in secondary metabolite and plant hormone biosyntheses, and transcription factors which are involved in stress tolerance in O. ochrocephala. In order to validate our sequencing results, we further analyzed the expression profiles of nine genes by quantitative real-time PCR. Finally, we discuss the possible mechanism of O. ochrocephala's adaptations to stress environment. Conclusion: Our transcriptome sequencing

TaNAC29, a NAC transcription factor from wheat, enhances salt and drought tolerance in transgenic Arabidopsis.

PubMed

Huang, Quanjun; Wang, Yan; Li, Bin; Chang, Junli; Chen, Mingjie; Li, Kexiu; Yang, Guangxiao; He, Guangyuan

2015-11-04

NAC (NAM, ATAF, and CUC) transcription factors play important roles in plant biological processes, including phytohormone homeostasis, plant development, and in responses to various environmental stresses. TaNAC29 was introduced into Arabidopsis using the Agrobacterium tumefaciens-mediated floral dipping method. TaNAC29-overexpression plants were subjected to salt and drought stresses for examining gene functions. To investigate tolerant mechanisms involved in the salt and drought responses, expression of related marker genes analyses were conducted, and related physiological indices were also measured. Expressions of genes were analyzed by quantitative real-time polymerase chain reaction (qRT-PCR). A novel NAC transcription factor gene, designated TaNAC29, was isolated from bread wheat (Triticum aestivum). Sequence alignment suggested that TaNAC29 might be located on chromosome 2BS. TaNAC29 was localized to the nucleus in wheat protoplasts, and proved to have transcriptional activation activities in yeast. TaNAC29 was expressed at a higher level in the leaves, and expression levels were much higher in senescent leaves, indicating that TaNAC29 might be involved in the senescence process. TaNAC29 transcripts were increased following treatments with salt, PEG6000, H2O2, and abscisic acid (ABA). To examine TaNAC29 function, transgenic Arabidopsis plants overexpressing TaNAC29 were generated. Germination and root length assays of transgenic plants demonstrated that TaNAC29 overexpression plants had enhanced tolerances to high salinity and dehydration, and exhibited an ABA-hypersensitive response. When grown in the greenhouse, TaNAC29-overexpression plants showed the same tolerance response to salt and drought stresses at both the vegetative and reproductive period, and had delayed bolting and flowering in the reproductive period. Moreover, TaNAC29 overexpression plants accumulated lesser malondialdehyde (MDA), H2O2, while had higher superoxide dismutase (SOD) and

Co-transforming bar and CsALDH Genes Enhanced Resistance to Herbicide and Drought and Salt Stress in Transgenic Alfalfa (Medicago sativa L.)

PubMed Central

Duan, Zhen; Zhang, Daiyu; Zhang, Jianquan; Di, Hongyan; Wu, Fan; Hu, Xiaowen; Meng, Xuanchen; Luo, Kai; Zhang, Jiyu; Wang, Yanrong

2015-01-01

Drought and high salinity are two major abiotic factors that restrict the productivity of alfalfa. By application of the Agrobacterium-mediated transformation method, an oxidative responsive gene, CsALDH12A1, from the desert grass Cleistogenes songorica together with the bar gene associated with herbicide resistance, were co-transformed into alfalfa (Medicago sativa L.). From the all 90 transformants, 16 were positive as screened by spraying 1 mL L-1 10% Basta solution and molecularly diagnosis using PCR. Real-time PCR analysis indicated that drought and salt stress induced high CsALDH expression in the leaves of the transgenic plants. The CsALDH expression levels under drought (15 d) and salt stress (200 mM NaCl) were 6.11 and 6.87 times higher than in the control plants, respectively. In comparison to the WT plants, no abnormal phenotypes were observed among the transgenic plants, which showed significant enhancement of tolerance to 15 d of drought and 10 d of salinity treatment. Evaluation of the physiological and biochemical indices during drought and salt stress of the transgenic plants revealed relatively lower Na+ content and higher K+ content in the leaves relative to the WT plants, a reduction of toxic on effects and maintenance of osmotic adjustment. In addition, the transgenic plants could maintain a higher relative water content level, higher shoot biomass, fewer changes in the photosystem, decreased membrane injury, and a lower level of osmotic stress. These results indicate that the co-expression of the introduced bar and CsALDH genes enhanced the herbicide, drought and salt tolerance of alfalfa and therefore can potentially be used as a novel genetic resource for the future breeding programs to develop new cultivars. PMID:26734025

Monitoring and understanding changes in heat waves, cold waves, floods, and droughts in the United States: State of knowledge

USGS Publications Warehouse

Peterson, Thomas C.; Heim, Richard R.; Hirsch, Robert M.; Kaiser, Dale P.; Brooks, Harold; Diffenbaugh, Noah S.; Dole, Randall M.; Giovannettone, Jason P.; Guirguis, Kristen; Karl, Thomas R.; Katz, Richard W.; Kunkel, Kenneth E.; Lettenmaier, Dennis P.; McCabe, Gregory J.; Paciorek, Christopher J.; Ryberg, Karen R.; K Wolter, BS Silva; Schubert, Siegfried; Silva, Viviane B. S.; Stewart, Brooke C.; Vecchia, Aldo V.; Villarini, Gabriele; Vose, Russell S.; Walsh, John; Wehner, Michael; Wolock, David; Wolter, Klaus; Woodhouse, Connie A.; Wuebbles, Donald

2013-01-01

Weather and climate extremes have been varying and changing on many different time scales. In recent decades, heat waves have generally become more frequent across the United States, while cold waves have been decreasing. While this is in keeping with expectations in a warming climate, it turns out that decadal variations in the number of U.S. heat and cold waves do not correlate well with the observed U.S. warming during the last century. Annual peak flow data reveal that river flooding trends on the century scale do not show uniform changes across the country. While flood magnitudes in the Southwest have been decreasing, flood magnitudes in the Northeast and north-central United States have been increasing. Confounding the analysis of trends in river flooding is multiyear and even multidecadal variability likely caused by both large-scale atmospheric circulation changes and basin-scale “memory” in the form of soil moisture. Droughts also have long-term trends as well as multiyear and decadal variability. Instrumental data indicate that the Dust Bowl of the 1930s and the drought in the 1950s were the most significant twentieth-century droughts in the United States, while tree ring data indicate that the megadroughts over the twelfth century exceeded anything in the twentieth century in both spatial extent and duration. The state of knowledge of the factors that cause heat waves, cold waves, floods, and drought to change is fairly good with heat waves being the best understood.

Transcriptome Sequencing of Dianthus spiculifolius and Analysis of the Genes Involved in Responses to Combined Cold and Drought Stress.

PubMed

Zhou, Aimin; Ma, Hongping; Liu, Enhui; Jiang, Tongtong; Feng, Shuang; Gong, Shufang; Wang, Jingang

2017-04-17

Dianthus spiculifolius , a perennial herbaceous flower and a member of the Caryophyllaceae family, has strong resistance to cold and drought stresses. To explore the transcriptional responses of D. spiculifolius to individual and combined stresses, we performed transcriptome sequencing of seedlings under normal conditions or subjected to cold treatment (CT), simulated drought treatment (DT), or their combination (CTDT). After de novo assembly of the obtained reads, 112,015 unigenes were generated. Analysis of differentially expressed genes (DEGs) showed that 2026, 940, and 2346 genes were up-regulated and 1468, 707, and 1759 were down-regulated in CT, DT, and CTDT samples, respectively. Among all the DEGs, 182 up-regulated and 116 down-regulated genes were identified in all the treatment groups. Analysis of metabolic pathways and regulatory networks associated with the DEGs revealed overlaps and cross-talk between cold and drought stress response pathways. The expression profiles of the selected DEGs in CT, DT, and CTDT samples were characterized and confirmed by quantitative RT-PCR. These DEGs and metabolic pathways may play important roles in the response of D. spiculifolius to the combined stress. Functional characterization of these genes and pathways will provide new targets for enhancement of plant stress tolerance through genetic manipulation.

Transcriptome Sequencing of Dianthus spiculifolius and Analysis of the Genes Involved in Responses to Combined Cold and Drought Stress

PubMed Central

Zhou, Aimin; Ma, Hongping; Liu, Enhui; Jiang, Tongtong; Feng, Shuang; Gong, Shufang; Wang, Jingang

2017-01-01

Dianthus spiculifolius, a perennial herbaceous flower and a member of the Caryophyllaceae family, has strong resistance to cold and drought stresses. To explore the transcriptional responses of D. spiculifolius to individual and combined stresses, we performed transcriptome sequencing of seedlings under normal conditions or subjected to cold treatment (CT), simulated drought treatment (DT), or their combination (CTDT). After de novo assembly of the obtained reads, 112,015 unigenes were generated. Analysis of differentially expressed genes (DEGs) showed that 2026, 940, and 2346 genes were up-regulated and 1468, 707, and 1759 were down-regulated in CT, DT, and CTDT samples, respectively. Among all the DEGs, 182 up-regulated and 116 down-regulated genes were identified in all the treatment groups. Analysis of metabolic pathways and regulatory networks associated with the DEGs revealed overlaps and cross-talk between cold and drought stress response pathways. The expression profiles of the selected DEGs in CT, DT, and CTDT samples were characterized and confirmed by quantitative RT-PCR. These DEGs and metabolic pathways may play important roles in the response of D. spiculifolius to the combined stress. Functional characterization of these genes and pathways will provide new targets for enhancement of plant stress tolerance through genetic manipulation. PMID:28420173

Genetic Analysis of Ca 2+ Priming in Arabidopsis Guard Cell Stomatal Closure in Response to the Drought Hormone Abscisic Acid

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stephan, Aaron B.

2014-11-01

A primary objective of modern agriculture and biofuel production is to utilize arable land to its fullest potential. However, sub-optimal growing conditions—arising from abiotic stresses such as drought, soil salinity, low humidity, cold, and heat—reduce crop yield and quality. Optimal yield under both stressed and non-stressed conditions requires the plant to activate coping mechanisms at a level commensurate with the severity of the drought stress. The osmotic sensors and associated regulatory mechanisms that initiate drought- and salt-tolerance responses in plants are largely unknown. This research aimed to identify and characterize these initial sensory components.

The Art of Being Flexible: How to Escape from Shade, Salt, and Drought1

PubMed Central

Pierik, Ronald; Testerink, Christa

2014-01-01

Environmental stresses, such as shading of the shoot, drought, and soil salinity, threaten plant growth, yield, and survival. Plants can alleviate the impact of these stresses through various modes of phenotypic plasticity, such as shade avoidance and halotropism. Here, we review the current state of knowledge regarding the mechanisms that control plant developmental responses to shade, salt, and drought stress. We discuss plant hormones and cellular signaling pathways that control shoot branching and elongation responses to shade and root architecture modulation in response to drought and salinity. Because belowground stresses also result in aboveground changes and vice versa, we then outline how a wider palette of plant phenotypic traits is affected by the individual stresses. Consequently, we argue for a research agenda that integrates multiple plant organs, responses, and stresses. This will generate the scientific understanding needed for future crop improvement programs aiming at crops that can maintain yields under variable and suboptimal conditions. PMID:24972713

The U-box family genes in Medicago truncatula: Key elements in response to salt, cold, and drought stresses.

PubMed

Song, Jianbo; Mo, Xiaowei; Yang, Haiqi; Yue, Luming; Song, Jun; Mo, Beixin

2017-01-01

The ubiquitination pathway regulates growth, development, and stress responses in plants, and the U-box protein family of ubiquitin ligases has important roles in this pathway. Here, 64 putative U-box proteins were identified in the Medicago truncatula genome. In addition to the conserved U-box motif, other functional domains, such as the ARM, kinase, KAP, and WD40 domains, were also detected. Phylogenetic analysis of the M. truncatula U-box proteins grouped them into six subfamilies, and chromosomal mapping and synteny analyses indicated that tandem and segmental duplications may have contributed to the expansion and evolution of the U-box gene family in this species. Using RNA-seq data from M. truncatula seedlings subjected to three different abiotic stresses, we identified 33 stress-inducible plant U-box genes (MtPUBs). Specifically, 25 salinity-, 15 drought-, and 16 cold-regulated MtPUBs were detected. Among them, MtPUB10, MtPUB17, MtPUB18, MtPUB35, MtPUB42, and MtPUB44 responded to all three stress conditions. Expression profiling by qRT-PCR was consistent with the RNA-seq data, and stress-related elements were identified in the promoter regions. The present findings strongly indicate that U-box proteins play critical roles in abiotic stress response in M. truncatula.

The U-box family genes in Medicago truncatula: Key elements in response to salt, cold, and drought stresses

PubMed Central

Yang, Haiqi; Yue, Luming; Song, Jun

2017-01-01

The ubiquitination pathway regulates growth, development, and stress responses in plants, and the U-box protein family of ubiquitin ligases has important roles in this pathway. Here, 64 putative U-box proteins were identified in the Medicago truncatula genome. In addition to the conserved U-box motif, other functional domains, such as the ARM, kinase, KAP, and WD40 domains, were also detected. Phylogenetic analysis of the M. truncatula U-box proteins grouped them into six subfamilies, and chromosomal mapping and synteny analyses indicated that tandem and segmental duplications may have contributed to the expansion and evolution of the U-box gene family in this species. Using RNA-seq data from M. truncatula seedlings subjected to three different abiotic stresses, we identified 33 stress-inducible plant U-box genes (MtPUBs). Specifically, 25 salinity-, 15 drought-, and 16 cold-regulated MtPUBs were detected. Among them, MtPUB10, MtPUB17, MtPUB18, MtPUB35, MtPUB42, and MtPUB44 responded to all three stress conditions. Expression profiling by qRT-PCR was consistent with the RNA-seq data, and stress-related elements were identified in the promoter regions. The present findings strongly indicate that U-box proteins play critical roles in abiotic stress response in M. truncatula. PMID:28771553

Cold-season patterns of reserve and soluble carbohydrates in sugar maple and ice-damaged trees of two age classes following drought

Treesearch

B. L. Wong; K. L. Baggett; A. H. Rye

2009-01-01

This study examines the effects of summer drought on the composition and profiles of cold-season reserve and soluble carbohydrates in sugar maple (Acer saccharum Marsh.) trees (50-100 years old or ~200 years old) in which the crowns were nondamaged or damaged by the 1998 ice storm. The overall cold season reserve...

Overexpression of a Common Wheat Gene TaSnRK2.8 Enhances Tolerance to Drought, Salt and Low Temperature in Arabidopsis

PubMed Central

Zhang, Hongying; Mao, Xinguo; Wang, Chengshe; Jing, Ruilian

2010-01-01

Drought, salinity and low temperatures are major factors limiting crop productivity and quality. Sucrose non-fermenting1-related protein kinase 2 (SnRK2) plays a key role in abiotic stress signaling in plants. In this study, TaSnRK2.8, a SnRK2 member in wheat, was cloned and its functions under multi-stress conditions were characterized. Subcellular localization showed the presence of TaSnRK2.8 in the cell membrane, cytoplasm and nucleus. Expression pattern analyses in wheat revealed that TaSnRK2.8 was involved in response to PEG, NaCl and cold stresses, and possibly participates in ABA-dependent signal transduction pathways. To investigate its role under various environmental stresses, TaSnRK2.8 was transferred to Arabidopsis under control of the CaMV-35S promoter. Overexpression of TaSnRK2.8 resulted in enhanced tolerance to drought, salt and cold stresses, further confirmed by longer primary roots and various physiological characteristics, including higher relative water content, strengthened cell membrane stability, significantly lower osmotic potential, more chlorophyll content, and enhanced PSII activity. Meanwhile, TaSnRK2.8 plants had significantly lower total soluble sugar levels under normal growing conditions, suggesting that TaSnRK2.8 might be involved in carbohydrate metabolism. Moreover, the transcript levels of ABA biosynthesis (ABA1, ABA2), ABA signaling (ABI3, ABI4, ABI5), stress-responsive genes, including two ABA-dependent genes (RD20A, RD29B) and three ABA-independent genes (CBF1, CBF2, CBF3), were generally higher in TaSnRK2.8 plants than in WT/GFP controls under normal/stress conditions. Our results suggest that TaSnRK2.8 may act as a regulatory factor involved in a multiple stress response pathways. PMID:21209856

Morpho-physiological characterization of cold-and pre-flowering drought tolerance in grain Sorghum (Sorghum bicolor L. Moench) inbreds

USDA-ARS?s Scientific Manuscript database

Aim: The relationships between early-season cold temperature germination and preflowering drought stress in eight grain sorghum inbreds were assessed using morphophysiological traits. Study Design: Field was laid out in a randomized complete block design. Place and Duration: The experiment was condu...

Cold and drought stress in combination with pyrene exposure: studies with Protaphorura armata (Collembola: Onychiuridae).

PubMed

Sjursen, Heidi; Holmstrup, Martin

2004-02-01

Adult survival of the springtail Protaphorura armata exposed to pyrene, a common soil pollutant, was investigated in combination with cold and drought stress, in three separate experiments. (1) A drought stress imposed subsequent to pyrene exposure in soil resulted in a significant decrease in springtail survival, when compared with controls exposed to pyrene and subsequently to 100% relative humidity. (2) A previous exposure to drought stress resulted in slightly improved survival of pyrene exposure at a concentration of 10mg/kg, but not at higher pyrene concentrations. When comparing tests 1 and 2, better survival was found in the latter test. When comparing the drought survival of springtails that had been previously exposed to pyrene with drought survival of springtails with no previous history of pyrene exposure, survival was significantly lower in the former. (3) Springtail survival of pyrene exposure was investigated at several temperatures. Springtails showed a significant improvement in survival at temperatures fluctuating between +1 degrees C and -1 degrees C in 12:12-h cycles, and at a constant -3 degrees C, at the highest pyrene concentration (300 mg/kg), while survival remained the same at all temperatures when springtails were exposed to lower pyrene concentrations. It is concluded that temperature and water availability are important factors when assessing the springtails' susceptibility to pyrene exposure.

The cotton WRKY transcription factor GhWRKY17 functions in drought and salt stress in transgenic Nicotiana benthamiana through ABA signaling and the modulation of reactive oxygen species production.

PubMed

Yan, Huiru; Jia, Haihong; Chen, Xiaobo; Hao, Lili; An, Hailong; Guo, Xingqi

2014-12-01

Drought and high salinity are two major environmental factors that significantly limit the productivity of agricultural crops worldwide. WRKY transcription factors play essential roles in the adaptation of plants to abiotic stresses. However, WRKY genes involved in drought and salt tolerance in cotton (Gossypium hirsutum) are largely unknown. Here, a group IId WRKY gene, GhWRKY17, was isolated and characterized. GhWRKY17 was found to be induced after exposure to drought, salt, H2O2 and ABA. The constitutive expression of GhWRKY17 in Nicotiana benthamiana remarkably reduced plant tolerance to drought and salt stress, as determined through physiological analyses of the germination rate, root growth, survival rate, leaf water loss and Chl content. GhWRKY17 transgenic plants were observed to be more sensitive to ABA-mediated seed germination and root growth. However, overexpressing GhWRKY17 in N. benthamiana impaired ABA-induced stomatal closure. Furthermore, we found that GhWRKY17 modulated the increased sensitivity of plants to drought by reducing the level of ABA, and transcript levels of ABA-inducible genes, including AREB, DREB, NCED, ERD and LEA, were clearly repressed under drought and salt stress conditions. Consistent with the accumulation of reactive oxygen species (ROS), reduced proline contents and enzyme activities, elevated electrolyte leakage and malondialdehyde, and lower expression of ROS-scavenging genes, including APX, CAT and SOD, the GhWRKY17 transgenic plants exhibited reduced tolerance to oxidative stress compared with wild-type plants. These results therefore indicate that GhWRKY17 responds to drought and salt stress through ABA signaling and the regulation of cellular ROS production in plants. © The Author 2014. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

CaPUB1, a Hot Pepper U-box E3 Ubiquitin Ligase, Confers Enhanced Cold Stress Tolerance and Decreased Drought Stress Tolerance in Transgenic Rice (Oryza sativa L.).

PubMed

Min, Hye Jo; Jung, Ye Jin; Kang, Bin Goo; Kim, Woo Taek

2016-03-01

Abiotic stresses such as drought and low temperature critically restrict plant growth, reproduction, and productivity. Higher plants have developed various defense strategies against these unfavorable conditions. CaPUB1 (Capsicum annuum Putative U-box protein 1) is a hot pepper U-box E3 Ub ligase. Transgenic Arabidopsis plants that constitutively expressed CaPUB1 exhibited drought-sensitive phenotypes, suggesting that it functions as a negative regulator of the drought stress response. In this study, CaPUB1 was over-expressed in rice (Oryza sativa L.), and the phenotypic properties of transgenic rice plants were examined in terms of their drought and cold stress tolerance. Ubi:CaPUB1 T3 transgenic rice plants displayed phenotypes hypersensitive to dehydration, suggesting that its role in the negative regulation of drought stress response is conserved in dicot Arabidopsis and monocot rice plants. In contrast, Ubi:CaPUB1 progeny exhibited phenotypes markedly tolerant to prolonged low temperature (4°C) treatment, compared to those of wild-type plants, as determined by survival rates, electrolyte leakage, and total chlorophyll content. Cold stress-induced marker genes, including DREB1A, DREB1B, DREB1C, and Cytochrome P450, were more up-regulated by cold treatment in Ubi:CaPUB1 plants than in wild-type plants. These results suggest that CaPUB1 serves as both a negative regulator of the drought stress response and a positive regulator of the cold stress response in transgenic rice plants. This raises the possibility that CaPUB1 participates in the cross-talk between drought and low-temperature signaling pathways.

GsLRPK, a novel cold-activated leucine-rich repeat receptor-like protein kinase from Glycine soja, is a positive regulator to cold stress tolerance.

PubMed

Yang, Liang; Wu, Kangcheng; Gao, Peng; Liu, Xiaojuan; Li, Guangpu; Wu, Zujian

2014-02-01

Plant LRR-RLKs serve as protein interaction platforms, and as regulatory modules of protein activation. Here, we report the isolation of a novel plant-specific LRR-RLK from Glycine soja (termed GsLRPK) by differential screening. GsLRPK expression was cold-inducible and shows Ser/Thr protein kinase activity. Subcellular localization studies using GFP fusion protein indicated that GsLRPK is localized in the plasma membrane. Real-time PCR analysis indicated that temperature, salt, drought, and ABA treatment can alter GsLRPK gene transcription in G. soja. However, just protein induced by cold stress not by salinity and ABA treatment in tobacco was found to possess kinase activity. Furthermore, we found that overexpression of GsLRPK in yeast and Arabidopsis can enhance resistance to cold stress and increase the expression of a number of cold responsive gene markers. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

Overexpression of a Calcium-Dependent Protein Kinase Confers Salt and Drought Tolerance in Rice by Preventing Membrane Lipid Peroxidation1[C][W

PubMed Central

Campo, Sonia; Baldrich, Patricia; Messeguer, Joaquima; Lalanne, Eric; Coca, María; San Segundo, Blanca

2014-01-01

The OsCPK4 gene is a member of the complex gene family of calcium-dependent protein kinases in rice (Oryza sativa). Here, we report that OsCPK4 expression is induced by high salinity, drought, and the phytohormone abscisic acid. Moreover, a plasma membrane localization of OsCPK4 was observed by transient expression assays of green fluorescent protein-tagged OsCPK4 in onion (Allium cepa) epidermal cells. Overexpression of OsCPK4 in rice plants significantly enhances tolerance to salt and drought stress. Knockdown rice plants, however, are severely impaired in growth and development. Compared with control plants, OsCPK4 overexpressor plants exhibit stronger water-holding capability and reduced levels of membrane lipid peroxidation and electrolyte leakage under drought or salt stress conditions. Also, salt-treated OsCPK4 seedlings accumulate less Na+ in their roots. We carried out microarray analysis of transgenic rice overexpressing OsCPK4 and found that overexpression of OsCPK4 has a low impact on the rice transcriptome. Moreover, no genes were found to be commonly regulated by OsCPK4 in roots and leaves of rice plants. A significant number of genes involved in lipid metabolism and protection against oxidative stress appear to be up-regulated by OsCPK4 in roots of overexpressor plants. Meanwhile, OsCPK4 overexpression has no effect on the expression of well-characterized abiotic stress-associated transcriptional regulatory networks (i.e. ORYZA SATIVA DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN1 and ORYZA SATIVA No Apical Meristem, Arabidopsis Transcription Activation Factor1-2, Cup-Shaped Cotyledon6 genes) and LATE EMBRYOGENESIS ABUNDANT genes in their roots. Taken together, our data show that OsCPK4 functions as a positive regulator of the salt and drought stress responses in rice via the protection of cellular membranes from stress-induced oxidative damage. PMID:24784760

Characteristics of two novel cold- and salt-tolerant ammonia-oxidizing bacteria from Liaohe Estuarine Wetland.

PubMed

Huang, Xiao; Bai, Jie; Li, Kui-Ran; Zhao, Yang-Guo; Tian, Wei-Jun; Dang, Jia-Jia

2017-01-15

To achieve a better contaminant removal efficiency in a low-temperature and high-salt environment, two novel strains of cold- and salt-tolerant ammonia-oxidizing bacteria (AOB), i.e., Ochrobactrum sp. (HXN-1) and Aquamicrobium sp. (HXN-2), were isolated from the surface sediment of Liaohe Estuarine Wetland (LEW), China. The optimization of initial ammonia nitrogen concentration, pH, carbon-nitrogen ratio, and petroleum hydrocarbons (PHCs) to improve the ammonia-oxidation capacity of the two bacterial strains was studied. Both bacterial strains showed a high ammonia nitrogen removal rate of over 80% under a high salinity of 10‰. Even at a temperature as low as 15°C, HXN-1 and HXN-2 could achieve an ammonia nitrogen removal rate of 53% and 62%, respectively. The cold- and salt-tolerant AOB in this study demonstrated a high potential for ammonia nitrogen removal from LEW. Copyright © 2016 Elsevier Ltd. All rights reserved.

Osmotic and elastic adjustments in cold desert shrubs differing in rooting depth: coping with drought and subzero temperatures

Treesearch

Fabian G. Scholz; Sandra J. Bucci; Nadia Arias; Frederick C. Meinzer; Guillermo Goldstein

2012-01-01

Physiological adjustments to enhance tolerance or avoidance of summer drought and winter freezing were studied in shallow- to deep-rooted Patagonian cold desert shrubs. We measured leaf water potential, osmotic potential, tissue elasticity, stem hydraulic characteristics, and stomatal conductance across species throughout the year, and assessed tissue damage by subzero...

Antioxidant capacity of polyphenolic extracts from leaves of Crataegus laevigata and Crataegus monogyna (Hawthorn) subjected to drought and cold stress.

PubMed

Kirakosyan, Ara; Seymour, Elisabeth; Kaufman, Peter B; Warber, Sara; Bolling, Steven; Chang, Soo Chul

2003-07-02

Crataegus laevigata and Crataegus monogyna (hawthorn) were subjected to drought and cold stress treatments, and polyphenolic extracts from control and stress-treated plants were assayed for antioxidant capacities using a modified version of the Total Antioxidant Status Assay (Randox, San Francisco, CA). In addition, these plants were analyzed for levels of flavanol-type substance [(-)-epicatechin] and flavonoid (vitexin 2' '-O-rhamnoside, acetylvitexin 2' '-O-rhamnoside, and hyperoside) constituents that are important metabolites in hawthorn herbal preparations used to treat patients with heart disease. Drought and cold stress treatments caused increases in levels of (-)-epicatechin and hyperoside in both Crataegus species. Such treatments also enhanced the antioxidant capacity of the extracts. The results from this study thus indicate that these kinds of stress treatments can enhance the levels of important secondary metabolites and their total antioxidant capacities in leaves of Crataegus.

Genome-Wide Identification of AP2/ERF Transcription Factors in Cauliflower and Expression Profiling of the ERF Family under Salt and Drought Stresses

PubMed Central

Li, Hui; Wang, Yu; Wu, Mei; Li, Lihong; Li, Cong; Han, Zhanpin; Yuan, Jiye; Chen, Chengbin; Song, Wenqin; Wang, Chunguo

2017-01-01

The AP2/ERF transcription factors (TFs) comprise one of the largest gene superfamilies in plants. These TFs perform vital roles in plant growth, development, and responses to biotic and abiotic stresses. In this study, 171 AP2/ERF TFs were identified in cauliflower (Brassica oleracea L. var. botrytis), one of the most important horticultural crops in Brassica. Among these TFs, 15, 9, and 1 TFs were classified into the AP2, RAV, and Soloist family, respectively. The other 146 TFs belong to ERF family, which were further divided into the ERF and DREB subfamilies. The ERF subfamily contained 91 TFs, while the DREB subfamily contained 55 TFs. Phylogenetic analysis results indicated that the AP2/ERF TFs can be classified into 13 groups, in which 25 conserved motifs were confirmed. Some motifs were group- or subgroup- specific, implying that they are significant to the functions of the AP2/ERF TFs of these clades. In addition, 35 AP2/ERF TFs from the 13 groups were selected randomly and then used for expression pattern analysis under salt and drought stresses. The majority of these AP2/ERF TFs exhibited positive responses to these stress conditions. In specific, Bra-botrytis-ERF054a, Bra-botrytis-ERF056, and Bra-botrytis-CRF2a demonstrated rapid responses. By contrast, six AP2/ERF TFs were showed to delay responses to both stresses. The AP2/ERF TFs exhibiting specific expression patterns under salt or drought stresses were also confirmed. Further functional analysis indicated that ectopic overexpression of Bra-botrytis-ERF056 could increase tolerance to both salt and drought treatments. These findings provide new insights into the AP2/ERF TFs present in cauliflower, and offer candidate AP2/ERF TFs for further studies on their roles in salt and drought stress tolerance. PMID:28642765

Over-expression of TaMYB33 encoding a novel wheat MYB transcription factor increases salt and drought tolerance in Arabidopsis.

PubMed

Qin, Yuxiang; Wang, Mengcheng; Tian, Yanchen; He, Wenxing; Han, Lu; Xia, Guangmin

2012-06-01

Salt and drought stresses often adversely affect plant growth and productivity, MYB transcription factors have been shown to participate in the response to these stresses. Here we identified a new R2R3-type MYB transcription factor gene TaMYB33 from wheat (Triticum aestivum). TaMYB33 was induced by NaCl, PEG and ABA treatments, and its promoter sequence contains putative ABRE, MYB and other abiotic stress related cis-elements. Ectopic over-expression of TaMYB33 in Arabidopsis thaliana remarkably enhanced its tolerance to drought and NaCl stresses, but not to LiCl and KCl treatments. The expressions of AtP5CS and AtZAT12 which mirror the activities of proline and ascorbate peroxidase synthesis respectively were induced in TaMYB33 over-expression lines, indicating TaMYB33 promotes the ability for osmotic pressure balance-reconstruction and reactive oxidative species (ROS) scavenging. The up-regulation of AtAAO3 along with down-regulation of AtABF3, AtABI1 in TaMYB33 over-expression lines indicated that ABA synthesis was elevated while its signaling was restricted. These results suggest that TaMYB33 enhances salt and drought tolerance partially through superior ability for osmotic balance reconstruction and ROS detoxification.

Overexpression of HARDY, an AP2/ERF gene from Arabidopsis, improves drought and salt tolerance by reducing transpiration and sodium uptake in transgenic Trifolium alexandrinum L.

PubMed

Abogadallah, Gaber M; Nada, Reham M; Malinowski, Robert; Quick, Paul

2011-06-01

Trifolium alexandrinum L. was transformed with the Arabidopsis HARDY gene that belongs to the stress-related AP2/ERF (APETALA2/ethylene responsive element binding factors) superfamily of transcription factors. The fresh weights of the transgenic lines L2 and L3 were improved by 42 and 55% under drought stress and by 38 and 95% under salt stress compared to the wild type, respectively. The dry weights were similarly improved. Overexpression of HARDY improved the instantaneous water use efficiency (WUE) under drought stress by reducing transpiration (E) and under salt stress by improving photosynthesis (A), through reducing Na+ accumulation in leaves, and reducing E. However, HARDY improved the growth of drought-stressed transgenic plants as compared to the wild type by delaying water depletion from soil and preventing rapid decline in A. L2 and L3 had thicker stems and in case of L3, more xylem rows per vascular bundle, which may have made L3 more resistant to lodging in the field. Field performance of L2 and L3 under combined drought and salt stress was significantly better than that of the wild type in terms of fresh and dry weights (40%, 46% and 31%, 40%, respectively). The results provide further evidence for the efficiency of overexpression of a single gene in improving tolerance to abiotic stress under field conditions.

Accumulation of acidic SK₃ dehydrins in phloem cells of cold- and drought-stressed plants of the Solanaceae.

PubMed

Szabala, Bartosz Mieczyslaw; Fudali, Sylwia; Rorat, Tadeusz

2014-04-01

The role of acidic SK(n) dehydrins in stress tolerance of important crop and model species of the Solanaceae remains unknown. We have previously shown that the acidic SK₃ dehydrin DHN24 from Solanum sogarandinum is constitutively expressed and its expression is associated with cold acclimation. Here we found that DHN24 is specifically localized to phloem cells of vegetative organs of non-acclimated plants. More precise localization of DHN24 revealed that it is primarily found in sieve elements (SEs) and companion cells (CCs) of roots and stems. In cold-acclimated plants, DHN24 is mainly present in all cell types of the phloem. Dhn24 transcripts are also predominantly localized to phloem cells of cold-acclimated stems. Immunoelectron microscopy localized DHN24 to the cytosol and close to organelle membranes of phloem cells, the lumen with phloem protein filaments, parietal cytoplasm of SEs and the nucleoplasm of some nuclei. Cell fractionation experiments revealed that DHN24 was detected in the cytosolic, nuclear and microsomal fractions. We also determined whether homologous members of the acidic subclass dehydrins from Capsicum annuum and Lycopersicon chilense share the characteristics of DHN24. We showed that they are also constitutively expressed, but their protein level is upregulated preferentially by drought stress. Immunofluorescent localization revealed that they are detected in SEs and CCs of unstressed plants and throughout the phloem in drought-stressed plants. These results suggest that one of the primary roles of DHN24 and its homologs may be the protection of the phloem region from adverse effects of abiotic stresses.

GhABF2, a bZIP transcription factor, confers drought and salinity tolerance in cotton (Gossypium hirsutum L.).

PubMed

Liang, Chengzhen; Meng, Zhaohong; Meng, Zhigang; Malik, Waqas; Yan, Rong; Lwin, Khin Myat; Lin, Fazhuang; Wang, Yuan; Sun, Guoqing; Zhou, Tao; Zhu, Tao; Li, Jianying; Jin, Shuangxia; Guo, Sandui; Zhang, Rui

2016-10-07

The bZIP transcription factor (TF) act as an important regulator for the abscisic acid (ABA) mediated abiotic stresses signaling pathways in plants. Here, we reported the cloning and characterization of GhABF2, encoding for typical cotton bZIP TF. Overexpression of GhABF2 significantly improved drought and salt stress tolerance both in Arabidopsis and cotton. However, silencing of GhABF2 made transgenic cotton sensitive to PEG osmotic and salt stress. Expression of GhABF2 was induced by drought and ABA treatments but repressed by high salinity. Transcriptome analysis indicated that GhABF2 increases drought and salt tolerance by regulating genes related to ABA, drought and salt response. The proline contents, activity of superoxide dismutase (SOD) and catalase (CAT) were also significantly increased in GhABF2-overexpression cottons in comparison to wild type after drought and salt treatment. Further, an increase in fiber yield under drought and saline-alkali wetland exhibited the important role of GhABF2 in enhancing the drought and salt tolerance in transgenic lines. In conclusion, manipulation of GhABF2 by biotechnological tools could be a sustainable strategy to deploy drought and salt tolerance in cotton.

Overexpression of an Arabidopsis heterogeneous nuclear ribonucleoprotein gene, AtRNP1, affects plant growth and reduces plant tolerance to drought and salt stresses

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Zhenyu, E-mail: wzy72609@163.com; Zhao, Xiuyang, E-mail: xiuzh@psb.vib-ugent.be; Wang, Bing, E-mail: wangbing@ibcas.ac.cn

Heterogeneous nuclear ribonucleoproteins (hnRNPs) participate in diverse regulations of plant growth and environmental stress responses. In this work, an Arabidopsis hnRNP of unknown function, AtRNP1, was investigated. We found that AtRNP1 gene is highly expressed in rosette and cauline leaves, and slightly induced under drought, salt, osmotic and ABA stresses. AtRNP1 protein is localized to both the nucleus and cytoplasm. We performed homologous overexpression of AtRNP1 and found that the transgenic plants showed shortened root length and plant height, and accelerated flowering. In addition, the transgenic plants also showed reduced tolerance to drought, salt, osmotic and ABA stresses. Further studiesmore » revealed that under both normal and stress conditions, the proline contents in the transgenic plants are markedly decreased, associated with reduced expression levels of a proline synthase gene and several stress-responsive genes. These results suggested that the overexpression of AtRNP1 negatively affects plant growth and abiotic stress tolerance. - Highlights: • AtRNP1 is a widely expressed gene and its expression is slightly induced under abiotic stresses. • AtRNP1 protein is localized to both the nucleus and cytoplasm. • Overexpression of AtRNP1 affects plant growth. • Overexpression of AtRNP1 reduces plant tolerance to drought and salt stresses. • AtRNP1 overexpression plants show decreased proline accumulation and stress-responsive gene expressions.« less

Water potential in soil and Atriplex nummularia (phytoremediator halophyte) under drought and salt stresses.

PubMed

de Melo, Hidelblandi Farias; de Souza, Edivan Rodrigues; de Almeida, Brivaldo Gomes; Mulas, Maurizio

2018-02-23

Atriplex nummularia is a halophyte widely employed to recover saline soils and was used as a model to evaluate the water potentials in the soil-plant system under drought and salt stresses. Potted plants grown under 70 and 37% of field capacity irrigated with solutions of NaCl and of a mixture of NaCl, KCl, MgCl 2 and CaCl 2 reproducing six electrical conductivity (EC): 0, 5, 10, 20, 30, and 40 dS m -1 . After 100 days, total water (Ψ w, plant ) and osmotic (Ψ o, plant ) potentials at predawn and midday and Ψ o, soil , matric potential (Ψ m, soil ) and Ψ w, soil were determined. The type of ion in the irrigation water did not influence the soil potential, but was altered by EC. The soil Ψ o component was the largest contributor to Ψ w, soil . Atriplex is surviving ECs close to 40 dS m -1 due to the decrease in the Ψ w . The plants reached a Ψ w of approximately -8 MPa. The water potentials determined for different moisture levels, EC levels and salt types showed huge importance for the management of this species in semiarid regions and can be used to recover salt affected soils.

A cold-induced pectin methyl-esterase inhibitor gene contributes negatively to freezing tolerance but positively to salt tolerance in Arabidopsis.

PubMed

Chen, Jian; Chen, Xuehui; Zhang, Qingfeng; Zhang, Yidan; Ou, Xiangli; An, Lizhe; Feng, Huyuan; Zhao, Zhiguang

2018-03-01

Plant pectin methyl-esterase (PME) and PME inhibitor (PMEI) belong to large gene families whose members are proposed to be widely involved in growth, development, and stress responses; however, the biological functions of most PMEs and PMEIs have not been characterized. In this study, we studied the roles of CbPMEI1, a cold-induced pectin methyl-esterase inhibitor (PMEI) gene from Chorispora bungeana, under freezing and salt stress. The putative CbPMEI1 peptide shares highest similarity (83%) with AT5G62360 (PMEI13) of Arabidopsis. Overexpression of either CbPMEI1 or PMEI13 in Arabidopsis decreased tissue PME activity and enhanced the degree of methoxylation of cell wall pectins, indicating that both genes encode functional PMEIs. CbPMEI1 and PMEI13 were induced by cold but repressed by salt stress and abscisic acid, suggesting distinct roles of the genes in freezing and salt stress tolerance. Interestingly, transgenic Arabidopsis plants overexpressing CbPMEI1 or PMEI13 showed decreased freezing tolerance, as indicated by survival and electrolyte leakage assays. On the other hand, the salt tolerance of transgenic plants was increased, showing higher rates of germination, root growth, and survival under salinity conditions as compared with non-transgenic wild-type plants. Although the transgenic plants were freezing-sensitive, they showed longer roots than wild-type plants under cold conditions, suggesting a role of PMEs in balancing the trade-off between freezing tolerance and growth. Thus, our study indicates that CbPMEI1 and PMEI13 are involved in root growth regulation under cold and salt stresses, and suggests that PMEIs may be potential targets for genetic engineering aimed to improve fitness of plants under stress conditions. Copyright © 2018 Elsevier GmbH. All rights reserved.

Overexpression of an alfalfa GDP-mannose 3, 5-epimerase gene enhances acid, drought and salt tolerance in transgenic Arabidopsis by increasing ascorbate accumulation.

PubMed

Ma, Lichao; Wang, Yanrong; Liu, Wenxian; Liu, Zhipeng

2014-11-01

GDP-mannose 3', 5'-epimerase (GME) catalyses the conversion of GDP-D-mannose to GDP-L-galactose, an important step in the ascorbic acid (ascorbic acid) biosynthetic pathway in higher plants. In this study, a novel cDNA fragment (MsGME) encoding a GME protein was isolated and characterised from alfalfa (Medicago sativa). An expression analysis confirmed that MsGME expression was induced by salinity, PEG and acidity stresses. MsGME overexpression in Arabidopsis enhanced tolerance of the transgenic plants to salt, drought and acid. Real-time PCR analysis revealed that the transcript levels of GDP-D-mannose pyrophosphorylase (GMP), L-galactose-phosphate 1-P phosphatase (GP) and GDP-L-galactose phosphorylase (GGP) were increased in transgenic Arabidopsis (T3 generation). Moreover, the ascorbate content was increased in transgenic Arabidopsis. Our results suggest that MsGME can effectively enhance tolerance of transgenic Arabidopsis to acid, drought and salt by increasing ascorbate accumulation.

RiceMetaSys for salt and drought stress responsive genes in rice: a web interface for crop improvement.

PubMed

Sandhu, Maninder; Sureshkumar, V; Prakash, Chandra; Dixit, Rekha; Solanke, Amolkumar U; Sharma, Tilak Raj; Mohapatra, Trilochan; S V, Amitha Mithra

2017-09-30

Genome-wide microarray has enabled development of robust databases for functional genomics studies in rice. However, such databases do not directly cater to the needs of breeders. Here, we have attempted to develop a web interface which combines the information from functional genomic studies across different genetic backgrounds with DNA markers so that they can be readily deployed in crop improvement. In the current version of the database, we have included drought and salinity stress studies since these two are the major abiotic stresses in rice. RiceMetaSys, a user-friendly and freely available web interface provides comprehensive information on salt responsive genes (SRGs) and drought responsive genes (DRGs) across genotypes, crop development stages and tissues, identified from multiple microarray datasets. 'Physical position search' is an attractive tool for those using QTL based approach for dissecting tolerance to salt and drought stress since it can provide the list of SRGs and DRGs in any physical interval. To identify robust candidate genes for use in crop improvement, the 'common genes across varieties' search tool is useful. Graphical visualization of expression profiles across genes and rice genotypes has been enabled to facilitate the user and to make the comparisons more impactful. Simple Sequence Repeat (SSR) search in the SRGs and DRGs is a valuable tool for fine mapping and marker assisted selection since it provides primers for survey of polymorphism. An external link to intron specific markers is also provided for this purpose. Bulk retrieval of data without any limit has been enabled in case of locus and SSR search. The aim of this database is to facilitate users with a simple and straight-forward search options for identification of robust candidate genes from among thousands of SRGs and DRGs so as to facilitate linking variation in expression profiles to variation in phenotype. Database URL: http://14.139.229.201.

A myo-inositol-1-phosphate synthase gene, IbMIPS1, enhances salt and drought tolerance and stem nematode resistance in transgenic sweet potato.

PubMed

Zhai, Hong; Wang, Feibing; Si, Zengzhi; Huo, Jinxi; Xing, Lei; An, Yanyan; He, Shaozhen; Liu, Qingchang

2016-02-01

Myo-inositol-1-phosphate synthase (MIPS) is a key rate limiting enzyme in myo-inositol biosynthesis. The MIPS gene has been shown to improve tolerance to abiotic stresses in several plant species. However, its role in resistance to biotic stresses has not been reported. In this study, we found that expression of the sweet potato IbMIPS1 gene was induced by NaCl, polyethylene glycol (PEG), abscisic acid (ABA) and stem nematodes. Its overexpression significantly enhanced stem nematode resistance as well as salt and drought tolerance in transgenic sweet potato under field conditions. Transcriptome and real-time quantitative PCR analyses showed that overexpression of IbMIPS1 up-regulated the genes involved in inositol biosynthesis, phosphatidylinositol (PI) and ABA signalling pathways, stress responses, photosynthesis and ROS-scavenging system under salt, drought and stem nematode stresses. Inositol, inositol-1,4,5-trisphosphate (IP3 ), phosphatidic acid (PA), Ca(2+) , ABA, K(+) , proline and trehalose content was significantly increased, whereas malonaldehyde (MDA), Na(+) and H2 O2 content was significantly decreased in the transgenic plants under salt and drought stresses. After stem nematode infection, the significant increase of inositol, IP3 , PA, Ca(2+) , ABA, callose and lignin content and significant reduction of MDA content were found, and a rapid increase of H2 O2 levels was observed, peaked at 1 to 2 days and thereafter declined in the transgenic plants. This study indicates that the IbMIPS1 gene has the potential to be used to improve the resistance to biotic and abiotic stresses in plants. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Natural enemies govern ecosystem resilience in the face of extreme droughts.

PubMed

He, Qiang; Silliman, Brian R; Liu, Zezheng; Cui, Baoshan

2017-02-01

Severe droughts are on the rise in many regions. But thus far, attempts to predict when drought will cause a major regime shift or when ecosystems are resilient, often using plant drought tolerance models, have been frustrated. Here, we show that pressure from natural enemies regulates an ecosystem's resilience to severe droughts. Field experiments revealed that in protected salt marshes experiencing a severe drought, plant-eating grazers eliminated drought-stressed vegetation that could otherwise survive and recover from the climate extreme, transforming once lush marshes into persistent salt barrens. These results provide an explicit experimental demonstration for the obligatory role of natural enemies across the initiation, expansion and recovery stages of a natural ecosystem's collapse. Our study highlights that natural enemies can hasten an ecosystem's resilience to drought to much lower levels than currently predicted, calling for integration into climate change predictions and conservation strategies. © 2017 John Wiley & Sons Ltd/CNRS.

Transcription Factor CBF4 Is a Regulator of Drought Adaptation in Arabidopsis1

PubMed Central

Haake, Volker; Cook, Daniel; Riechmann, José Luis; Pineda, Omaira; Thomashow, Michael F.; Zhang, James Z.

2002-01-01

In plants, low temperature and dehydration activate a set of genes containing C-repeat/dehydration-responsive elements in their promoter. It has been shown previously that the Arabidopsis CBF/DREB1 transcription activators are critical regulators of gene expression in the signal transduction of cold acclimation. Here, we report the isolation of an apparent homolog of the CBF/DREB1 proteins (CBF4) that plays the equivalent role during drought adaptation. In contrast to the three already identified CBF/DREB1 homologs, which are induced under cold stress, CBF4 gene expression is up-regulated by drought stress, but not by low temperature. Overexpression of CBF4 in transgenic Arabidopsis plants results in the activation of C-repeat/dehydration-responsive element containing downstream genes that are involved in cold acclimation and drought adaptation. As a result, the transgenic plants are more tolerant to freezing and drought stress. Because of the physiological similarity between freezing and drought stress, and the sequence and structural similarity of the CBF/DREB1 and the CBF4 proteins, we propose that the plant's response to cold and drought evolved from a common CBF-like transcription factor, first through gene duplication and then through promoter evolution. PMID:12376631

The Arabidopsis 14-3-3 Protein RARE COLD INDUCIBLE 1A Links Low-Temperature Response and Ethylene Biosynthesis to Regulate Freezing Tolerance and Cold Acclimation[C][W

PubMed Central

Catalá, Rafael; López-Cobollo, Rosa; Mar Castellano, M.; Angosto, Trinidad; Alonso, José M.; Ecker, Joseph R.; Salinas, Julio

2014-01-01

In plants, the expression of 14-3-3 genes reacts to various adverse environmental conditions, including cold, high salt, and drought. Although these results suggest that 14-3-3 proteins have the potential to regulate plant responses to abiotic stresses, their role in such responses remains poorly understood. Previously, we showed that the RARE COLD INDUCIBLE 1A (RCI1A) gene encodes the 14-3-3 psi isoform. Here, we present genetic and molecular evidence implicating RCI1A in the response to low temperature. Our results demonstrate that RCI1A functions as a negative regulator of constitutive freezing tolerance and cold acclimation in Arabidopsis thaliana by controlling cold-induced gene expression. Interestingly, this control is partially performed through an ethylene (ET)-dependent pathway involving physical interaction with different ACC SYNTHASE (ACS) isoforms and a decreased ACS stability. We show that, consequently, RCI1A restrains ET biosynthesis, contributing to establish adequate levels of this hormone in Arabidopsis under both standard and low-temperature conditions. We further show that these levels are required to promote proper cold-induced gene expression and freezing tolerance before and after cold acclimation. All these data indicate that RCI1A connects the low-temperature response with ET biosynthesis to modulate constitutive freezing tolerance and cold acclimation in Arabidopsis. PMID:25122152

Effect of temperature, water-phase salt and phenolic contents on Listeria monocytogenes growth rates on cold-smoked salmon and evaluation of secondary models.

PubMed

Cornu, M; Beaufort, A; Rudelle, S; Laloux, L; Bergis, H; Miconnet, N; Serot, T; Delignette-Muller, M L

2006-02-01

Salting and smoking are ancient processes for fish preservation. The effects of salt and phenolic smoke compounds on the growth rate of L. monocytogenes in cold-smoked salmon were investigated through physico-chemical analyses, challenge tests on surface of cold-smoked salmon at 4 degrees C and 8 degrees C, and a survey of the literature. Estimated growth rates were compared to predictions of existing secondary models, taking into account the effects of temperature, water phase salt content, phenolic content, and additional factors (e.g. pH, lactate, dissolved CO2). The secondary model proposed by Devlieghere et al. [Devlieghere, F., Geeraerd, A.H., Versyck, K.J., Vandewaetere, B., van Impe, J., Debevere, J., 2001. Growth of Listeria monocytogenes in modified atmosphere packed cooked meat products: a predictive model. Food Microbiology 18, 53-66.] and modified by Giménez and Dalgaard [Giménez, B., Dalgaard, P., 2004. Modelling and predicting the simultaneous growth of Listeria monocytogenes and spoilage micro-organisms in cold-smoked salmon. Journal of Applied Microbiology 96, 96-109.] appears appropriate. However, further research is needed to understand all effects affecting growth of L. monocytogenes in cold-smoked salmon and to obtain fully validated predictive models for use in quantitative risk assessment.

Salt and smoke simultaneously affect chemical and sensory quality of cold-smoked salmon during 5 degrees C storage predicted using factorial design.

PubMed

Leroi, F; Joffraud, J J

2000-09-01

Simultaneous effect of salt and smoke on chemical indices of cold-smoked salmon and on its shelf life, estimated by sensory analysis, was investigated during vacuum-packed storage at 5 degrees C. Salting salmon immediately decreased the pH in the flesh, probably due to the increase of the ionic force, then pH remained constant during storage. Total volatile base nitrogen and trimethylamine productions were mainly inhibited by the salt concentration in the flesh, whereas phenol had no effect. A highly synergistic effect between the two factors was observed on the shelf life response. When a high level of salt (5% wt/wt) or phenol (1 mg 100 g(-1)) was added separately, shelf life did not exceed 1 week, whereas it could reach more than 10 weeks when salt and smoke were added simultaneously. Different combinations were examined for shelf life characteristics of the product. For instance, 2 and 3% (wt/wt) of salt with, respectively, 0.80 and 0.45 mg 100 g(-1) of phenol were sufficient for a 4-week shelf life, satisfying most of French cold-smoked salmon producers and consumers. Correlation between microbiological responses measured in a previous study and chemical and sensory data were also established.

Proteome Analysis for Understanding Abiotic Stress (Salinity and Drought) Tolerance in Date Palm (Phoenix dactylifera L.).

PubMed

El Rabey, Haddad A; Al-Malki, Abdulrahman L; Abulnaja, Khalid O; Rohde, Wolfgang

2015-01-01

This study was carried out to study the proteome of date palm under salinity and drought stress conditions to possibly identify proteins involved in stress tolerance. For this purpose, three-month-old seedlings of date palm cultivar "Sagie" were subjected to drought (27.5 g/L polyethylene glycol 6000) and salinity stress conditions (16 g/L NaCl) for one month. DIGE analysis of protein extracts identified 47 differentially expressed proteins in leaves of salt- and drought-treated palm seedlings. Mass spectrometric analysis identified 12 proteins; three out of them were significantly changed under both salt and drought stress, while the other nine were significantly changed only in salt-stressed plants. The levels of ATP synthase alpha and beta subunits, an unknown protein and some of RubisCO fragments were significantly changed under both salt and drought stress conditions. Changes in abundance of superoxide dismutase, chlorophyll A-B binding protein, light-harvesting complex1 protein Lhca1, RubisCO activase, phosphoglycerate kinase, chloroplast light-harvesting chlorophyll a/b-binding protein, phosphoribulokinase, transketolase, RubisCO, and some of RubisCO fragments were significant only for salt stress.

ABP9, a maize bZIP transcription factor, enhances tolerance to salt and drought in transgenic cotton.

PubMed

Wang, Chunling; Lu, Guoqing; Hao, Yuqiong; Guo, Huiming; Guo, Yan; Zhao, Jun; Cheng, Hongmei

2017-09-01

ABP9 , encoding a bZIP transcription factor from maize, enhances tolerance to multiple stresses and may participate in the ABA signaling pathway in transgenic cotton by altering physiological and biochemical processes and stress-related gene expression. Abiotic stresses, such as soil salinity and drought, negatively affect growth, development, and yield in cotton. Gene ABP9, which encodes a bZIP transcription factor, binds to the abscisic acid (ABA)-responsive-element (ABRE2) motif of the maize catalase1 gene. Its expression significantly improves tolerance in Arabidopsis to multiple abiotic stresses, but little is known about its role in cotton. In the present study, the ABP9 gene was introduced into upland cotton (Gossypium hirsutum L.) cultivar R15 by Agrobacterium tumefaciens-mediated transformation, and 12 independent transgenic cotton lines were obtained. Cotton plants over-expressing ABP9 have enhanced tolerance to salt and osmotic stress. Under stress, they developed better root systems in a greenhouse and higher germination, reduced stomatal aperture, and stomatal density in a growth chamber. Under drought conditions, survival rate and relative water content (RWC) of transgenic cotton were higher than those of R15 plants. Under salt and osmotic stresses, chlorophyll, proline, and soluble sugar contents significantly increased in transgenic cotton leaves and the malondialdehyde (MDA) content was lower than in R15. Overexpression of ABP9 also enhanced oxidative stress tolerance, reduced cellular levels of reactive oxygen species (ROS) through increased activities of antioxidative enzymes, and alleviated oxidative damage to cell. Interestingly, ABP9 over-expressing cotton was more sensitive to exogenous ABA than R15 at seed germination, root growth, stomatal aperture, and stomatal density. Moreover, ABP9 overexpression upregulated significantly the transcription levels of stress-related genes such as GhDBP2, GhNCED2, GhZFP1, GhERF1, GhHB1, and GhSAP1 under

The MAPKKK gene family in cassava: Genome-wide identification and expression analysis against drought stress.

PubMed

Ye, Jianqiu; Yang, Hai; Shi, Haitao; Wei, Yunxie; Tie, Weiwei; Ding, Zehong; Yan, Yan; Luo, Ying; Xia, Zhiqiang; Wang, Wenquan; Peng, Ming; Li, Kaimian; Zhang, He; Hu, Wei

2017-11-02

Mitogen-activated protein kinase kinase kinases (MAPKKKs), an important unit of MAPK cascade, play crucial roles in plant development and response to various stresses. However, little is known concerning the MAPKKK family in the important subtropical and tropical crop cassava. In this study, 62 MAPKKK genes were identified in the cassava genome, and were classified into 3 subfamilies based on phylogenetic analysis. Most of MAPKKKs in the same subfamily shared similar gene structures and conserved motifs. The comprehensive transcriptome analysis showed that MAPKKK genes participated in tissue development and response to drought stress. Comparative expression profiles revealed that many MAPKKK genes were activated in cultivated varieties SC124 and Arg7 and the function of MeMAPKKKs in drought resistance may be different between SC124/Arg7 and W14. Expression analyses of the 7 selected MeMAPKKK genes showed that most of them were significantly upregulated by osmotic, salt and ABA treatments, whereas slightly induced by H 2 O 2 and cold stresses. Taken together, this study identified candidate MeMAPKKK genes for genetic improvement of abiotic stress resistance and provided new insights into MAPKKK -mediated cassava resistance to drought stress.

[Characteristics and adaptation of seasonal drought in southern China under the background of climate change. V. Seasonal drought characteristics division and assessment in southern China].

PubMed

Huang, Wan-Hua; Sui, Yue; Yang, Xiao-Guang; Dai, Shu-Wei; Li, Mao-Song

2013-10-01

Zoning seasonal drought based on the study of drought characteristics can provide theoretical basis for formulating drought mitigation plans and improving disaster reduction technologies in different arid zones under global climate change. Based on the National standard of meteorological drought indices and agricultural drought indices and the 1959-2008 meteorological data from 268 meteorological stations in southern China, this paper analyzed the climatic background and distribution characteristics of seasonal drought in southern China, and made a three-level division of seasonal drought in this region by the methods of combining comprehensive factors and main factors, stepwise screening indices, comprehensive disaster analysis, and clustering analysis. The first-level division was with the annual aridity index and seasonal aridity index as the main indices and with the precipitation during entire year and main crop growing season as the auxiliary indices, dividing the southern China into four primary zones, including semi-arid zone, sub-humid zone, humid zone, and super-humid zone. On this basis, the four primary zones were subdivided into nine second-level zones, including one semi-arid area-temperate-cold semi-arid hilly area in Sichuan-Yunnan Plateau, three sub-humid areas of warm sub-humid area in the north of the Yangtze River, warm-tropical sub-humid area in South China, and temperate-cold sub-humid plateau area in Southwest China, three humid areas of temperate-tropical humid area in the Yangtze River Basin, warm-tropical humid area in South China, and warm humid hilly area in Southwest China, and two super-humid areas of warm-tropical super-humid area in South China and temperate-cold super-humid hilly area in the south of the Yangtze River and Southwest China. According to the frequency and intensity of multiple drought indices, the second-level zones were further divided into 29 third-level zones. The distribution of each seasonal drought zone was

Expression of an arabidopsis vacuolar H+-pyrophosphatase gene (AVP1) in cotton improves drought- and salt tolerance and increases fibre yield in the field conditions

USDA-ARS?s Scientific Manuscript database

The Arabidopsis gene AVP1 encodes a vacuolar pyrophosphatase that functions as a proton pump on the vacuolar membrane. Overexpression of AVP1 in Arabidopsis, tomato and rice enhances plant performance under salt and drought stress conditions, because up-regulation of the type I H+-PPase from Arabid...

Expression of an Arabidopsis Vacuolar H+-pyrophosphatase Gene (AVP1) in Cotton Improves Drought- and Salt Tolerance and Increases Fibre Yield in the Field Conditions.

USDA-ARS?s Scientific Manuscript database

The Arabidopsis gene AVP1 encodes a vacuolar pyrophosphatase that functions as a proton pump on the vacuolar membrane. Overexpression of AVP1 in Arabidopsis, tomato and rice enhances plant performance under salt and drought stress conditions, because up-regulation of the type I H+PPase from Arabido...

Rubber Trees Demonstrate a Clear Retranslocation Under Seasonal Drought and Cold Stresses

PubMed Central

Li, Yuwu; Lan, Guoyu; Xia, Yujie

2016-01-01

Having been introduced to the northern edge of Asian tropics, the rubber tree (Hevea brasiliensis) has become deciduous in this climate with seasonal drought and cold stresses. To determine its internal nutrient strategy during leaf senescence and deciduous periods, we investigated mature leaf and senescent leaf nutrients, water-soluble soil nutrients and characteristics of soil microbiota in nine different ages of monoculture rubber plantations. Rubber trees demonstrate complicated retranslocation of N, P, and K during foliar turnover. Approximately 50.26% of leaf nutrients and 21.47% of soil nutrients were redistributed to the rubber tree body during the leaf senescence and withering stages. However, no significant changes in the structure- or function-related properties of soil microbes were detected. These nutrient retranslocation strategy may be important stress responses. In the nutrient retranslocation process, soil plays a dual role as nutrient supplier and nutrient “bank.” Soil received the nutrients from abscised leaves, and also supplied nutrients to trees in the non-growth stage. Nutrient absorption and accumulation began before the leaves started to wither and fall. PMID:28066467

Common Cold

MedlinePlus

... cure for the common cold. But there are treatments that can make you feel better while you wait for the cold to go away on its own: Getting plenty of rest Drinking fluids Gargling with warm salt water Using cough drops or throat sprays Taking over-the-counter pain ...

OsMIOX, a myo-inositol oxygenase gene, improves drought tolerance through scavenging of reactive oxygen species in rice (Oryza sativa L.).

PubMed

Duan, Junzhi; Zhang, Minghui; Zhang, Hongliang; Xiong, Haiyan; Liu, Pengli; Ali, Jauhar; Li, Jinjie; Li, Zichao

2012-11-01

Myo-inositol oxygenase (MIOX), a unique monooxygenase, catalyzes the oxidation of myo-inositol to d-glucuronic acid. However, the protective role of MIOX in plants against oxidative stress or drought stress remains unknown. In this study, the functional characterization of MIOX obtained from the cDNA library of upland rice (Oryza sativa L. cv. IRAT109), was performed. OsMIOX was expressed predominantly in the roots and induced by drought, H₂O₂, salt, cold and abscisic acid. The transgenic rice lines overexpressing OsMIOX showed obviously improved growth performance in the medium containing 200 mM mannitol. Further, the survival rate of leaves from the transgenic rice lines was significantly higher than that of the wild type plants under polyethylene glycol treatment. It was discovered that the activity of ROS-scavenging enzymes and proline content, as well as the transcript levels of many ROS scavenging genes were significantly increased in transgenic plants compared to the wild type plants under drought stress conditions. Together, these data suggest that OsMIOX has a specific function in drought stress tolerance by decreasing oxidative damage. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

Overexpression of the alfalfa WRKY11 gene enhances salt tolerance in soybean

PubMed Central

Wang, Youjing; Jiang, Lin; Chen, Jiaqi; Tao, Lei; An, Yimin; Cai, Hongsheng

2018-01-01

The WRKY transcription factors play an important role in the regulation of transcriptional reprogramming associated with plant abiotic stress responses. In this study, the WRKY transcription factor MsWRKY11, containing the plant-specific WRKY zinc finger DNA–binding motif, was isolated from alfalfa. The MsWRKY11 gene was detected in all plant tissues (root, stem, leaf, flower, and fruit), with high expression in root and leaf tissues. MsWRKY11 was upregulated in response to a variety of abiotic stresses, including salinity, alkalinity, cold, abscisic acid, and drought. Overexpression of MsWRKY11 in soybean enhanced the salt tolerance at the seedling stage. Transgenic soybean had a better salt-tolerant phenotype, and the hypocotyls were significantly longer than those of wild-type seeds after salt treatment. Furthermore, MsWRKY11 overexpression increased the contents of chlorophyll, proline, soluble sugar, superoxide dismutase, and catalase, but reduced the relative electrical conductivity and the contents of malonaldehyde, H2O2, and O2-. Plant height, pods per plant, seeds per plant, and 100-seed weight of transgenic MsWRKY11 soybean were higher than those of wild-type soybean, especially OX2. Results of the salt experiment showed that MsWRKY11 is involved in salt stress responses, and its overexpression improves salt tolerance in soybean. PMID:29466387

Carbon, water, and energy fluxes in a semiarid cold desert grassland during and following multiyear drought

USGS Publications Warehouse

Bowling, David R.; Bethers-Marchetti, S.; Lunch, C.K.; Grote, E.E.; Belnap, J.

2010-01-01

The net exchanges of carbon dioxide, water vapor, and energy were examined in a perennial Colorado Plateau grassland for 5 years. The study began within a multiyear drought and continued as the drought ended. The grassland is located near the northern boundary of the influence of the North American monsoon, a major climatic feature bringing summer rain. Following rain, evapotranspiration peaked above 8 mm d-1 but was usually much smaller (2-4 mm d-1). Net productivity of the grassland was low compared to other ecosystems, with peak hourly net CO2 uptake in the spring of 4 (mu or u)mol m-2 s-1 and springtime carbon gain in the range of 42 + or - 11 g C m-2 (based on fluxes) to 72 + or - 55 g C m-2 (based on carbon stocks; annual carbon gain was not quantified). Drought decreased gross ecosystem productivity (GEP) and total ecosystem respiration, with a much larger GEP decrease. Monsoon rains led to respiratory pulses, lasting a few days at most, and only rarely resulted in net CO2 gain, despite the fact that C4 grasses dominated plant cover. Minor CO2 uptake was observed in fall following rain. Spring CO2 uptake was regulated by deep soil moisture, which depended on precipitation in the prior fall and winter. The lack of CO2 uptake during the monsoon and the dependence of GEP on deep soil moisture are in contrast with arid grasslands of the warm deserts. Cold desert grasslands are most likely to be impacted by future changes in winter and not summer precipitation.

Transcriptome Analysis Reveals Genes Commonly Induced by Botrytis cinerea Infection, Cold, Drought and Oxidative Stresses in Arabidopsis

PubMed Central

Al-Ameri, Salma; Al-Mahmoud, Bassam; Awwad, Falah; Al-Rawashdeh, Ahmed; Iratni, Rabah; AbuQamar, Synan

2014-01-01

Signaling pathways controlling biotic and abiotic stress responses may interact synergistically or antagonistically. To identify the similarities and differences among responses to diverse stresses, we analyzed previously published microarray data on the transcriptomic responses of Arabidopsis to infection with Botrytis cinerea (a biotic stress), and to cold, drought, and oxidative stresses (abiotic stresses). Our analyses showed that at early stages after B. cinerea inoculation, 1498 genes were up-regulated (B. cinerea up-regulated genes; BUGs) and 1138 genes were down-regulated (B. cinerea down-regulated genes; BDGs). We showed a unique program of gene expression was activated in response each biotic and abiotic stress, but that some genes were similarly induced or repressed by all of the tested stresses. Of the identified BUGs, 25%, 6% and 12% were also induced by cold, drought and oxidative stress, respectively; whereas 33%, 7% and 5.5% of the BDGs were also down-regulated by the same abiotic stresses. Coexpression and protein-protein interaction network analyses revealed a dynamic range in the expression levels of genes encoding regulatory proteins. Analysis of gene expression in response to electrophilic oxylipins suggested that these compounds are involved in mediating responses to B. cinerea infection and abiotic stress through TGA transcription factors. Our results suggest an overlap among genes involved in the responses to biotic and abiotic stresses in Arabidopsis. Changes in the transcript levels of genes encoding components of the cyclopentenone signaling pathway in response to biotic and abiotic stresses suggest that the oxylipin signal transduction pathway plays a role in plant defense. Identifying genes that are commonly expressed in response to environmental stresses, and further analyzing the functions of their encoded products, will increase our understanding of the plant stress response. This information could identify targets for genetic

Meteorological Modeling of Wintertime Cold Air Pool Stagnation Episodes in the Uintah and Salt Lake Basins

NASA Astrophysics Data System (ADS)

Crosman, E.; Horel, J.; Blaylock, B. K.; Foster, C.

2014-12-01

High wintertime ozone concentrations in rural areas associated with oil and gas development and high particulate concentrations in urban areas have become topics of increasing concern in the Western United States, as both primary and secondary pollutants become trapped within stable wintertime boundary layers. While persistent cold air pools that enable such poor wintertime air quality are typically associated with high pressure aloft and light winds, the complex physical processes that contribute to the formation, maintenance, and decay of persistent wintertime temperature inversions are only partially understood. In addition, obtaining sufficiently accurate numerical weather forecasts and meteorological simulations of cold air pools for input into chemical models remains a challenge. This study examines the meteorological processes associated with several wintertime pollution episodes in Utah's Uintah and Salt Lake Basins using numerical Weather Research and Forecasting model simulations and observations collected from the Persistent Cold Air Pool and Uintah Basin Ozone Studies. The temperature, vertical structure, and winds within these cold air pools was found to vary as a function of snow cover, snow albedo, land use, cloud cover, large-scale synoptic flow, and episode duration. We evaluate the sensitivity of key atmospheric features such as stability, planetary boundary layer depth, local wind flow patterns and transport mechanisms to variations in surface forcing, clouds, and synoptic flow. Finally, noted deficiencies in the meteorological models of cold air pools and modifications to the model snow and microphysics treatment that have resulted in improved cold pool simulations will be presented.

A SNARE-Like Superfamily Protein SbSLSP from the Halophyte Salicornia brachiata Confers Salt and Drought Tolerance by Maintaining Membrane Stability, K+/Na+ Ratio, and Antioxidant Machinery

PubMed Central

Singh, Dinkar; Yadav, Narendra Singh; Tiwari, Vivekanand; Agarwal, Pradeep K.; Jha, Bhavanath

2016-01-01

About 1000 salt-responsive ESTs were identified from an extreme halophyte Salicornia brachiata. Among these, a novel salt-inducible gene SbSLSP (Salicornia brachiata SNARE-like superfamily protein), showed up-regulation upon salinity and dehydration stress. The presence of cis-regulatory motifs related to abiotic stress in the putative promoter region supports our finding that SbSLSP gene is inducible by abiotic stress. The SbSLSP protein showed a high sequence identity to hypothetical/uncharacterized proteins from Beta vulgaris, Spinacia oleracea, Eucalyptus grandis, and Prunus persica and with SNARE-like superfamily proteins from Zostera marina and Arabidopsis thaliana. Bioinformatics analysis predicted a clathrin adaptor complex small-chain domain and N-myristoylation site in the SbSLSP protein. Subcellular localization studies indicated that the SbSLSP protein is mainly localized in the plasma membrane. Using transgenic tobacco lines, we establish that overexpression of SbSLSP resulted in elevated tolerance to salt and drought stress. The improved tolerance was confirmed by alterations in a range of physiological parameters, including high germination and survival rate, higher leaf chlorophyll contents, and reduced accumulation of Na+ ion and reactive oxygen species (ROS). Furthermore, overexpressing lines also showed lower water loss, higher cell membrane stability, and increased accumulation of proline and ROS-scavenging enzymes. Overexpression of SbSLSP also enhanced the transcript levels of ROS-scavenging and signaling enzyme genes. This study is the first investigation of the function of the SbSLSP gene as a novel determinant of salinity/drought tolerance. The results suggest that SbSLSP could be a potential candidate to increase salinity and drought tolerance in crop plants for sustainable agriculture in semi-arid saline soil. PMID:27313584

Analysis of petunia hybrida in response to salt stress using high throughput RNA sequencing

USDA-ARS?s Scientific Manuscript database

Salt and drought are among the greatest challenges to crop and native plants in meeting their yield and reproductive potentials. DNA sequencing-enabled transcriptome profiling provides a means of assessing what genes are responding to salt or drought stress so as to better understand the molecular ...

Comparative metabolomics of drought acclimation in model and forage legumes.

PubMed

Sanchez, Diego H; Schwabe, Franziska; Erban, Alexander; Udvardi, Michael K; Kopka, Joachim

2012-01-01

Water limitation has become a major concern for agriculture. Such constraints reinforce the urgent need to understand mechanisms by which plants cope with water deprivation. We used a non-targeted metabolomic approach to explore plastic systems responses to non-lethal drought in model and forage legume species of the Lotus genus. In the model legume Lotus. japonicus, increased water stress caused gradual increases of most of the soluble small molecules profiled, reflecting a global and progressive reprogramming of metabolic pathways. The comparative metabolomic approach between Lotus species revealed conserved and unique metabolic responses to drought stress. Importantly, only few drought-responsive metabolites were conserved among all species. Thus we highlight a potential impediment to translational approaches that aim to engineer traits linked to the accumulation of compatible solutes. Finally, a broad comparison of the metabolic changes elicited by drought and salt acclimation revealed partial conservation of these metabolic stress responses within each of the Lotus species, but only few salt- and drought-responsive metabolites were shared between all. The implications of these results are discussed with regard to the current insights into legume water stress physiology. © 2011 Blackwell Publishing Ltd.

The disruption of two salt bridges of the cold-active xylanase XynGR40 results in an increase in activity, but a decrease in thermostability.

PubMed

Wang, Guozeng; Wu, Jingjing; Lin, Juan; Ye, Xiuyun; Yao, Bin

2016-12-02

Cold-active xylanases are of great interest due to their large potential for application in the food industry. In this study, salt bridges of the eight glycoside hydrolase (GH) family 10 cold-active xylanases reported to date were predicted and the salt bridges specific to the cold-active xylanase XynGR40 were identified. Seven mutants were constructed to disrupt salt bridges specific to XynGR40. The results suggested that five mutants lost their xylanase activity, while the other two mutants, D30N and D83N, displayed different properties when compared with the wild-type XynGR40. First, both mutations showed an obvious decrease in thermostability, with the T 1/2 of D30N and D83N at 50 °C being about one half and one sixth of the wild-type, respectively. Second, both D30N and D83N had a higher specific activity than the wild-type, with activities about 13 and 163% higher, respectively. Third, both D30N and D83N had high k cat and K m values, which resulted in a higher catalytic efficiency of the mutant D83N, but a lower catalytic efficiency of the mutant D30N compared to the wild-type. Our results suggested that salt bridges play important roles in both the activity and thermostability of the cold-active xylanase XynGR40. The mutant D83N had a higher k cat and higher relative activity at low temperatures than the wild-type, and is a good candidate for application in the food industry. Copyright © 2016 Elsevier Inc. All rights reserved.

The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes.

PubMed

Tchigvintsev, Anatoli; Tran, Hai; Popovic, Ana; Kovacic, Filip; Brown, Greg; Flick, Robert; Hajighasemi, Mahbod; Egorova, Olga; Somody, Joseph C; Tchigvintsev, Dmitri; Khusnutdinova, Anna; Chernikova, Tatyana N; Golyshina, Olga V; Yakimov, Michail M; Savchenko, Alexei; Golyshin, Peter N; Jaeger, Karl-Erich; Yakunin, Alexander F

2015-03-01

Most of the Earth's biosphere is cold and is populated by cold-adapted microorganisms. To explore the natural enzyme diversity of these environments and identify new carboxylesterases, we have screened three marine metagenome gene libraries for esterase activity. The screens identified 23 unique active clones, from which five highly active esterases were selected for biochemical characterization. The purified metagenomic esterases exhibited high activity against α-naphthyl and p-nitrophenyl esters with different chain lengths. All five esterases retained high activity at 5 °C indicating that they are cold-adapted enzymes. The activity of MGS0010 increased more than two times in the presence of up to 3.5 M NaCl or KCl, whereas the other four metagenomic esterases were inhibited to various degrees by these salts. The purified enzymes showed different sensitivities to inhibition by solvents and detergents, and the activities of MGS0010, MGS0105 and MGS0109 were stimulated three to five times by the addition of glycerol. Screening of purified esterases against 89 monoester substrates revealed broad substrate profiles with a preference for different esters. The metagenomic esterases also hydrolyzed several polyester substrates including polylactic acid suggesting that they can be used for polyester depolymerization. Thus, esterases from marine metagenomes are cold-adapted enzymes exhibiting broad biochemical diversity reflecting the environmental conditions where they evolved.

Comparative proteomic and physiological analyses reveal the protective effect of exogenous polyamines in the bermudagrass (Cynodon dactylon) response to salt and drought stresses.

PubMed

Shi, Haitao; Ye, Tiantian; Chan, Zhulong

2013-11-01

Polyamines conferred enhanced abiotic stress tolerance in multiple plant species. However, the effect of polyamines on abiotic stress and physiological change in bermudagrass, the most widely used warm-season turfgrasses, are unknown. In this study, pretreatment of exogenous polyamine conferred increased salt and drought tolerances in bermudagrass. Comparative proteomic analysis was performed to further investigate polyamines mediated responses, and 36 commonly regulated proteins by at least two types of polyamines in bermudagrass were successfully identified, including 12 proteins with increased level, 20 proteins with decreased level and other 4 specifically expressed proteins. Among them, proteins involved in electron transport and energy pathways were largely enriched, and nucleoside diphosphate kinase (NDPK) and three antioxidant enzymes were extensively regulated by polyamines. Dissection of reactive oxygen species (ROS) levels indicated that polyamine-derived H2O2 production might play dual roles under abiotic stress conditions. Moreover, accumulation of osmolytes was also observed after application of exogenous polyamines, which is consistent with proteomics results that several proteins involved in carbon fixation pathway were mediated commonly by polyamines pretreatment. Taken together, we proposed that polyamines could activate multiple pathways that enhance bermudagrass adaption to salt and drought stresses. These findings might be applicable for genetically engineering of grasses and crops to improve stress tolerance.

Expression of CdDHN4, a Novel YSK2-Type Dehydrin Gene from Bermudagrass, Responses to Drought Stress through the ABA-Dependent Signal Pathway

PubMed Central

Lv, Aimin; Fan, Nana; Xie, Jianping; Yuan, Shili; An, Yuan; Zhou, Peng

2017-01-01

Dehydrin improves plant resistance to many abiotic stresses. In this study, the expression profiles of a dehydrin gene, CdDHN4, were estimated under various stresses and abscisic acid (ABA) treatments in two bermudagrasses (Cynodon dactylon L.): Tifway (drought-tolerant) and C299 (drought-sensitive). The expression of CdDHN4 was up-regulated by high temperatures, low temperatures, drought, salt and ABA. The sensitivity of CdDHN4 to ABA and the expression of CdDHN4 under drought conditions were higher in Tifway than in C299. A 1239-bp fragment, CdDHN4-P, the partial upstream sequence of the CdDHN4 gene, was cloned by genomic walking from Tifway. Bioinformatic analysis showed that the CdDHN4-P sequence possessed features typical of a plant promoter and contained many typical cis elements, including a transcription initiation site, a TATA-box, an ABRE, an MBS, a MYC, an LTRE, a TATC-box and a GT1-motif. Transient expression in tobacco leaves demonstrated that the promoter CdDHN4-P can be activated by ABA, drought and cold. These results indicate that CdDHN4 is regulated by an ABA-dependent signal pathway and that the high sensitivity of CdDHN4 to ABA might be an important mechanism enhancing the drought tolerance of bermudagrass. PMID:28559903

Expression of CdDHN4, a Novel YSK2-Type Dehydrin Gene from Bermudagrass, Responses to Drought Stress through the ABA-Dependent Signal Pathway.

PubMed

Lv, Aimin; Fan, Nana; Xie, Jianping; Yuan, Shili; An, Yuan; Zhou, Peng

2017-01-01

Dehydrin improves plant resistance to many abiotic stresses. In this study, the expression profiles of a dehydrin gene, CdDHN4 , were estimated under various stresses and abscisic acid (ABA) treatments in two bermudagrasses ( Cynodon dactylon L.): Tifway (drought-tolerant) and C299 (drought-sensitive). The expression of CdDHN4 was up-regulated by high temperatures, low temperatures, drought, salt and ABA. The sensitivity of CdDHN4 to ABA and the expression of CdDHN4 under drought conditions were higher in Tifway than in C299. A 1239-bp fragment, CdDHN4-P, the partial upstream sequence of the CdDHN4 gene, was cloned by genomic walking from Tifway. Bioinformatic analysis showed that the CdDHN4-P sequence possessed features typical of a plant promoter and contained many typical cis elements, including a transcription initiation site, a TATA-box, an ABRE, an MBS, a MYC, an LTRE, a TATC-box and a GT1-motif. Transient expression in tobacco leaves demonstrated that the promoter CdDHN4-P can be activated by ABA, drought and cold. These results indicate that CdDHN4 is regulated by an ABA-dependent signal pathway and that the high sensitivity of CdDHN4 to ABA might be an important mechanism enhancing the drought tolerance of bermudagrass.

In vitro selection of salinity tolerant variants from triploid bermudagrass (Cynodon transvaalensis x C. dactylon) and their physiological responses to salt and drought stress.

PubMed

Lu, Shaoyun; Peng, Xinxiang; Guo, Zhenfei; Zhang, Gengyun; Wang, Zhongcheng; Wang, Congying; Pang, Chaoshu; Fan, Zhen; Wang, Jihua

2007-08-01

A protocol was established for in vitro selection of salinity tolerant somaclonal variations from suspension cultured calli of triploid bermudagrass cv. TifEagle. To induce somaclonal variations the calli were subcultured for 18 months and were then subject to three-round selections for salt-tolerant calli by placing on solid medium containing 0.3 M NaCl for 10 days followed by a recovery for 2 weeks. The surviving calli were regenerated on regeneration medium containing 0.1 M NaCl. Three somaclonal variant lines (2, 71, and 77) were obtained and analyzed. The selected somaclonal lines showed higher relative growth and less injury than TifEagle under salt stress, indicating that they increased salt tolerance. In addition, they had higher relative water content and lower electrolyte leakage than TifEagle after withholding irrigation, indicating that they also increased drought tolerance. The three somaclonal variant lines had higher proline content than TifEagle under normal growth condition. The line 71 had a higher K(+)/Na(+) ratio, whereas the lines 2 and 77 had higher CAT activity under control and salt stress conditions, indicating that different mechanisms for salt tolerance might exist in these three lines.

Transcriptome Analysis of Salt Stress Responsiveness in the Seedlings of Dongxiang Wild Rice (Oryza rufipogon Griff.).

PubMed

Zhou, Yi; Yang, Ping; Cui, Fenglei; Zhang, Fantao; Luo, Xiangdong; Xie, Jiankun

2016-01-01

Dongxiang wild rice (Oryza rufipogon Griff.) is the progenitor of cultivated rice (Oryza sativa L.), and is well known for its superior level of tolerance against cold, drought and diseases. To date, however, little is known about the salt-tolerant character of Dongxiang wild rice. To elucidate the molecular genetic mechanisms of salt-stress tolerance in Dongxiang wild rice, the Illumina HiSeq 2000 platform was used to analyze the transcriptome profiles of the leaves and roots at the seedling stage under salt stress compared with those under normal conditions. The analysis results for the sequencing data showed that 6,867 transcripts were differentially expressed in the leaves (2,216 up-regulated and 4,651 down-regulated) and 4,988 transcripts in the roots (3,105 up-regulated and 1,883 down-regulated). Among these differentially expressed genes, the detection of many transcription factor genes demonstrated that multiple regulatory pathways were involved in salt stress tolerance. In addition, the differentially expressed genes were compared with the previous RNA-Seq analysis of salt-stress responses in cultivated rice Nipponbare, indicating the possible specific molecular mechanisms of salt-stress responses for Dongxiang wild rice. A large number of the salt-inducible genes identified in this study were co-localized onto fine-mapped salt-tolerance-related quantitative trait loci, providing candidates for gene cloning and elucidation of molecular mechanisms responsible for salt-stress tolerance in rice.

Transcriptome Analysis of Salt Stress Responsiveness in the Seedlings of Dongxiang Wild Rice (Oryza rufipogon Griff.)

PubMed Central

Zhou, Yi; Yang, Ping; Cui, Fenglei; Zhang, Fantao; Luo, Xiangdong; Xie, Jiankun

2016-01-01

Dongxiang wild rice (Oryza rufipogon Griff.) is the progenitor of cultivated rice (Oryza sativa L.), and is well known for its superior level of tolerance against cold, drought and diseases. To date, however, little is known about the salt-tolerant character of Dongxiang wild rice. To elucidate the molecular genetic mechanisms of salt-stress tolerance in Dongxiang wild rice, the Illumina HiSeq 2000 platform was used to analyze the transcriptome profiles of the leaves and roots at the seedling stage under salt stress compared with those under normal conditions. The analysis results for the sequencing data showed that 6,867 transcripts were differentially expressed in the leaves (2,216 up-regulated and 4,651 down-regulated) and 4,988 transcripts in the roots (3,105 up-regulated and 1,883 down-regulated). Among these differentially expressed genes, the detection of many transcription factor genes demonstrated that multiple regulatory pathways were involved in salt stress tolerance. In addition, the differentially expressed genes were compared with the previous RNA-Seq analysis of salt-stress responses in cultivated rice Nipponbare, indicating the possible specific molecular mechanisms of salt-stress responses for Dongxiang wild rice. A large number of the salt-inducible genes identified in this study were co-localized onto fine-mapped salt-tolerance-related quantitative trait loci, providing candidates for gene cloning and elucidation of molecular mechanisms responsible for salt-stress tolerance in rice. PMID:26752408

A novel cold-adapted and highly salt-tolerant esterase from Alkalibacterium sp. SL3 from the sediment of a soda lake

PubMed Central

Wang, Guozeng; Wang, Qiaohuang; Lin, Xianju; Bun Ng, Tzi; Yan, Renxiang; Lin, Juan; Ye, Xiuyun

2016-01-01

A novel esterase gene (estSL3) was cloned from the Alkalibacterium sp. SL3, which was isolated from the sediment of soda lake Dabusu. The 636-bp full-length gene encodes a polypeptide of 211 amino acid residues that is closely related with putative GDSL family lipases from Alkalibacterium and Enterococcus. The gene was successfully expressed in E. coli, and the recombinant protein (rEstSL3) was purified to electrophoretic homogeneity and characterized. rEstSL3 exhibited the highest activity towards pNP-acetate and had no activity towards pNP-esters with acyl chains longer than C8. The enzyme was highly cold-adapted, showing an apparent temperature optimum of 30 °C and remaining approximately 70% of the activity at 0 °C. It was active and stable over the pH range from 7 to 10, and highly salt-tolerant up to 5 M NaCl. Moreover, rEstSL3 was strongly resistant to most tested metal ions, chemical reagents, detergents and organic solvents. Amino acid composition analysis indicated that EstSL3 had fewer proline residues, hydrogen bonds and salt bridges than mesophilic and thermophilic counterparts, but more acidic amino acids and less hydrophobic amino acids when compared with other salt-tolerant esterases. The cold active, salt-tolerant and chemical-resistant properties make it a promising enzyme for basic research and industrial applications. PMID:26915906

Groundwater quality surrounding Lake Texoma during short-term drought conditions

USGS Publications Warehouse

Kampbell, D.H.; An, Y.-J.; Jewell, K.P.; Masoner, J.R.

2003-01-01

Water quality data from 55 monitoring wells during drought conditions surrounding Lake Texoma, located on the border of Oklahoma and Texas, was compared to assess the influence of drought on groundwater quality. During the drought month of October, water table levels were three feet (0.9 m) lower compared with several months earlier under predrought climate conditions. Detection frequencies of nitrate (> 0.1 mg/l), orthophosphates (> 0.1 mg/l), chlorides (> MCL), and sulfates (> MCL) all increased during drought. Orthophosphate level was higher during drought. Largest increases in concentration were nitrate under both agriculture lands and in septic tank areas. An increase in ammonium-nitrogen was only detected in the septic tank area. The study showed that stressors such as nitrate and total salts could potentially become a health or environmental problem during drought.

Transgenic Arabidopsis Plants Expressing the Type 1 Inositol 5-Phosphatase Exhibit Increased Drought Tolerance and Altered Abscisic Acid Signaling[W

PubMed Central

Perera, Imara Y.; Hung, Chiu-Yueh; Moore, Candace D.; Stevenson-Paulik, Jill; Boss, Wendy F.

2008-01-01

The phosphoinositide pathway and inositol-1,4,5-trisphosphate (InsP3) are implicated in plant responses to stress. To determine the downstream consequences of altered InsP3-mediated signaling, we generated transgenic Arabidopsis thaliana plants expressing the mammalian type I inositol polyphosphate 5-phosphatase (InsP 5-ptase), which specifically hydrolyzes soluble inositol phosphates and terminates the signal. Rapid transient Ca2+ responses to a cold or salt stimulus were reduced by ∼30% in these transgenic plants. Drought stress studies revealed, surprisingly, that the InsP 5-ptase plants lost less water and exhibited increased drought tolerance. The onset of the drought stress was delayed in the transgenic plants, and abscisic acid (ABA) levels increased less than in the wild-type plants. Stomatal bioassays showed that transgenic guard cells were less responsive to the inhibition of opening by ABA but showed an increased sensitivity to ABA-induced closure. Transcript profiling revealed that the drought-inducible ABA-independent transcription factor DREB2A and a subset of DREB2A-regulated genes were basally upregulated in the InsP 5-ptase plants, suggesting that InsP3 is a negative regulator of these DREB2A-regulated genes. These results indicate that the drought tolerance of the InsP 5-ptase plants is mediated in part via a DREB2A-dependent pathway and that constitutive dampening of the InsP3 signal reveals unanticipated interconnections between signaling pathways. PMID:18849493

Effects of heat, cold, acid and bile salt adaptations on the stress tolerance and protein expression of kefir-isolated probiotic Lactobacillus kefiranofaciens M1.

PubMed

Chen, Ming-Ju; Tang, Hsin-Yu; Chiang, Ming-Lun

2017-09-01

Lactobacillus kefiranofaciens M1 is a probiotic strain isolated from Taiwanese kefir grains. The present study evaluated the effects of heat, cold, acid and bile salt adaptations on the stress tolerance of L. kefiranofaciens M1. The regulation of protein expression of L. kefiranofaciens M1 under these adaptation conditions was also investigated. The results showed that adaptation of L. kefiranofaciens M1 to heat, cold, acid and bile salts induced homologous tolerance and cross-protection against heterologous challenge. The extent of induced tolerance varied depending on the type and condition of stress. Proteomic analysis revealed that 27 proteins exhibited differences in expression between non-adapted and stress-adapted L. kefiranofaciens M1 cells. Among these proteins, three proteins involved in carbohydrate metabolism (triosephosphate isomerase, enolase and NAD-dependent glycerol-3-phosphate dehydrogenase), two proteins involved in pH homeostasis (ATP synthase subunits AtpA and AtpB), two stress response proteins (chaperones DnaK and GroEL) and one translation-related protein (30S ribosomal protein S2) were up-regulated by three of the four adaptation treatments examined. The increased synthesis of these stress proteins might play a critical protective role in the cellular defense against heat, cold, acid and bile salt stresses. Copyright © 2017 Elsevier Ltd. All rights reserved.

Impact of drought and salt stress on the biosynthesis of alkaloids in Chelidonium majus L.

PubMed

Yahyazadeh, Mahdi; Meinen, Rieke; Hänsch, Robert; Abouzeid, Sara; Selmar, Dirk

2018-05-18

When plants are exposed to various stress situations, their alkaloid concentration frequently is enhanced. This well-known phenomenon is presumably due to a passively enhanced rate of biosynthesis, caused by greatly elevated concentrations of NADPH in stressed plants. Here, we used Chelidonium majus L. plants, which accumulate high concentrations of dihydrocoptisine in their leaves, to study the impact of drought and salt stress on the biosynthesis and accumulation of alkaloids. In comparison to well-watered controls, in the transcriptome of the gene encoding the key enzyme in alkaloid biosynthesis, stylopine synthase, is enhanced in stressed C. majus plants. If we presuppose that increased transcript levels correlate with increased enzymatic activity of the gene products, these data indicate, for the first time, that stress-related increases in alkaloid concentration might not only be caused by the well-known stress-related passive shift, but may also be due to an enhancement of enzymatic capacity. Copyright © 2018 Elsevier Ltd. All rights reserved.

New Insights on Drought Stress Response by Global Investigation of Gene Expression Changes in Sheepgrass (Leymus chinensis)

PubMed Central

Zhao, Pincang; Liu, Panpan; Yuan, Guangxiao; Jia, Junting; Li, Xiaoxia; Qi, Dongmei; Chen, Shuangyan; Ma, Tian; Liu, Gongshe; Cheng, Liqin

2016-01-01

Water is a critical environmental factor that restricts the geographic distribution of plants. Sheepgrass [Leymus chinensis, (Trin.) Tzvel] is an important forage grass in the Eurasia Steppe and a close germplasm for wheat and barley. This native grass adapts well to adverse environments such as cold, salinity, alkalinity and drought, and it can survive when the soil moisture may be less than 6% in dry seasons. However, little is known about how sheepgrass tolerates water stress at the molecular level. Here, drought stress experiment and RNA-sequencing (RNA-seq) was performed in three pools of RNA samples (control, drought stress, and rewatering). We found that sheepgrass seedlings could still survive when the soil water content (SWC) was reduced to 14.09%. Differentially expressed genes (DEGs) analysis showed that 7320 genes exhibited significant responses to drought stress. Of these DEGs, 2671 presented opposite expression trends before and after rewatering. Furthermore, ~680 putative sheepgrass-specific water responsive genes were revealed that can be studied deeply. Gene ontology (GO) annotation revealed that stress-associated genes were activated extensively by drought treatment. Interestingly, cold stress-related genes were up-regulated greatly after drought stress. The DEGs of MAPK and calcium signal pathways, plant hormone ABA, jasmonate, ethylene, brassinosteroid signal pathways, cold response CBF pathway participated coordinatively in sheepgrass drought stress response. In addition, we identified 288 putative transcription factors (TFs) involved in drought response, among them, the WRKY, NAC, AP2/ERF, bHLH, bZIP, and MYB families were enriched, and might play crucial and significant roles in drought stress response of sheepgrass. Our research provided new and valuable information for understanding the mechanism of drought tolerance in sheepgrass. Moreover, the identification of genes involved in drought response can facilitate the genetic improvement of

Separating Drought Effects from Roof Artifacts on Ecosystem Processes in a Grassland Drought Experiment

PubMed Central

Vogel, Anja; Fester, Thomas; Eisenhauer, Nico; Scherer-Lorenzen, Michael; Schmid, Bernhard; Weisser, Wolfgang W.; Weigelt, Alexandra

2013-01-01

1 Given the predictions of increased drought probabilities under various climate change scenarios, there have been numerous experimental field studies simulating drought using transparent roofs in different ecosystems and regions. Such roofs may, however, have unknown side effects, called artifacts, on the measured variables potentially confounding the experimental results. A roofed control allows the quantification of potential artifacts, which is lacking in most experiments. 2 We conducted a drought experiment in experimental grasslands to study artifacts of transparent roofs and the resulting effects of artifacts on ecosystems relative to drought on three response variables (aboveground biomass, litter decomposition and plant metabolite profiles). We established three drought treatments, using (1) transparent roofs to exclude rainfall, (2) an unroofed control treatment receiving natural rainfall and (3) a roofed control, nested in the drought treatment but with rain water reapplied according to ambient conditions. 3 Roofs had a slight impact on air (+0.14°C during night) and soil temperatures (−0.45°C on warm days, +0.25°C on cold nights), while photosynthetically active radiation was decreased significantly (−16%). Aboveground plant community biomass was reduced in the drought treatment (−41%), but there was no significant difference between the roofed and unroofed control, i.e., there were no measurable roof artifact effects. 4 Compared to the unroofed control, litter decomposition was decreased significantly both in the drought treatment (−26%) and in the roofed control treatment (−18%), suggesting artifact effects of the transparent roofs. Moreover, aboveground metabolite profiles in the model plant species Medicago x varia were different from the unroofed control in both the drought and roofed control treatments, and roof artifact effects were of comparable magnitude as drought effects. 5 Our results stress the need for roofed control

Characterizing the exceptional 2014 drought event in São Paulo by drought period length

NASA Astrophysics Data System (ADS)

Zou, Yong; Macau, Elbert E. N.; Sampaio, Gilvan; Ramos, Antônio M. T.; Kurths, Jürgen

2017-09-01

In the last decade, the southeast region of Brazil has been suffering severe water shortages. Here, we propose to compute the expected drought period length to characterize the drought events in the region of São Paulo. We report the unique properties of the exceptional drought event during the austral summer 2014 by showing the differences and similarities to the very dry season in 2001 and the mild dry seasons in 2006 and 2015. Furthermore, we investigate the correlations of the abnormal precipitation deficit with the ocean and atmospheric patterns. In comparison to other drought events, we validate the hypothetical mechanism that underlies the exceptional drought 2014: (1) The existence of an anomalous high pressure center in the area acts as a blocking mechanism that prevents moisture transport from the Amazon and passage of cold front systems from south Brazil. This blocking high has been observed in all dry seasons considered, with much larger magnitude in 2014. (2) The much faster increasing trend of the anomalous sea surface temperature acts as a strong feedback which intensified the extreme climate conditions. The unprecedented increasing trend of the SST in 2014 was not observed in other climate variables representing a high pressure center. Therefore, we conclude that the exceptional drought 2014 was enhanced by the feedback mechanism of anomalous warming of SST in the South Atlantic Oceans, which was resulted from the anomalous high pressure.

Constitutive expression of DaCBF7, an Antarctic vascular plant Deschampsia antarctica CBF homolog, resulted in improved cold tolerance in transgenic rice plants.

PubMed

Byun, Mi Young; Lee, Jungeun; Cui, Li Hua; Kang, Yoonjee; Oh, Tae Kyung; Park, Hyun; Lee, Hyoungseok; Kim, Woo Taek

2015-07-01

Deschampsia antarctica is an Antarctic hairgrass that grows on the west coast of the Antarctic peninsula. In this report, we have identified and characterized a transcription factor, D. antarctica C-repeat binding factor 7 (DaCBF7), that is a member of the monocot group V CBF homologs. The protein contains a single AP2 domain, a putative nuclear localization signal, and the typical CBF signature. DaCBF7, like other monocot group V homologs, contains a distinct polypeptide stretch composed of 43 amino acids in front of the AP2 motif. DaCBF7 was predominantly localized to nuclei and interacted with the C-repeat/dehydration responsive element (CRT/DRE) core sequence (ACCGAC) in vitro. DaCBF7 was induced by abiotic stresses, including drought, cold, and salinity. To investigate its possible cellular role in cold tolerance, a transgenic rice system was employed. DaCBF7-overexpressing transgenic rice plants (Ubi:DaCBF7) exhibited markedly increased tolerance to cold stress compared to wild-type plants without growth defects; however, overexpression of DaCBF7 exerted little effect on tolerance to drought or salt stress. Transcriptome analysis of a Ubi:DaCBF7 transgenic line revealed 13 genes that were up-regulated in DaCBF7-overexpressing plants compared to wild-type plants in the absence of cold stress and in short- or long-term cold stress. Five of these genes, dehydrin, remorin, Os03g63870, Os11g34790, and Os10g22630, contained putative CRT/DRE or low-temperature responsive elements in their promoter regions. These results suggest that overexpression of DaCBF7 directly and indirectly induces diverse genes in transgenic rice plants and confers enhanced tolerance to cold stress. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

A novel cold-inducible gene from Pak-choi (Brassica campestris ssp. chinensis), BcWRKY46, enhances the cold, salt and dehydration stress tolerance in transgenic tobacco.

PubMed

Wang, Feng; Hou, Xilin; Tang, Jun; Wang, Zhen; Wang, Shuming; Jiang, Fangling; Li, Ying

2012-04-01

WRKY TFs belong to one of the largest families of transcriptional regulators in plants and form integral parts of signaling webs that modulate many plant processes. BcWRKY46, a cDNA clone encoding a polypeptide of 284 amino acids and exhibited the structural features of group III of WRKY protein family, was isolated from the cold-treated leaves of Pak-choi (Brassica campestris ssp. chinensis Makino, syn. B. rapa ssp. chinensis) using the cDNA-AFLP technique. Expression of this gene was induced quickly and strongly in response to various environmental stresses, including low temperatures, ABA, salt and dehydration. Constitutive expression of BcWRKY46 in tobacco under the control of the CaMV35S promoter reduced the susceptibility of transgenic tobacco to freezing, ABA, salt and dehydration stresses. Our studies suggest that BcWRKY46 plays an important role in responding to ABA and abiotic stress.

Transcriptional profiling of Medicago truncatula under salt stress identified a novel CBF transcription factor MtCBF4 that plays an important role in abiotic stress responses

PubMed Central

2011-01-01

Background Salt stress hinders the growth of plants and reduces crop production worldwide. However, different plant species might possess different adaptive mechanisms to mitigate salt stress. We conducted a detailed pathway analysis of transcriptional dynamics in the roots of Medicago truncatula seedlings under salt stress and selected a transcription factor gene, MtCBF4, for experimental validation. Results A microarray experiment was conducted using root samples collected 6, 24, and 48 h after application of 180 mM NaCl. Analysis of 11 statistically significant expression profiles revealed different behaviors between primary and secondary metabolism pathways in response to external stress. Secondary metabolism that helps to maintain osmotic balance was induced. One of the highly induced transcription factor genes was successfully cloned, and was named MtCBF4. Phylogenetic analysis revealed that MtCBF4, which belongs to the AP2-EREBP transcription factor family, is a novel member of the CBF transcription factor in M. truncatula. MtCBF4 is shown to be a nuclear-localized protein. Expression of MtCBF4 in M. truncatula was induced by most of the abiotic stresses, including salt, drought, cold, and abscisic acid, suggesting crosstalk between these abiotic stresses. Transgenic Arabidopsis over-expressing MtCBF4 enhanced tolerance to drought and salt stress, and activated expression of downstream genes that contain DRE elements. Over-expression of MtCBF4 in M. truncatula also enhanced salt tolerance and induced expression level of corresponding downstream genes. Conclusion Comprehensive transcriptomic analysis revealed complex mechanisms exist in plants in response to salt stress. The novel transcription factor gene MtCBF4 identified here played an important role in response to abiotic stresses, indicating that it might be a good candidate gene for genetic improvement to produce stress-tolerant plants. PMID:21718548

A Ramie bZIP Transcription Factor BnbZIP2 Is Involved in Drought, Salt, and Heavy Metal Stress Response.

PubMed

Huang, Chengjian; Zhou, Jinghua; Jie, Yucheng; Xing, Hucheng; Zhong, Yingli; Yu, Weilin; She, Wei; Ma, Yushen; Liu, Zehang; Zhang, Ying

2016-12-01

bZIP transcription factors play key roles in plant growth, development, and stress signaling. A bZIP gene BnbZIP2 (GenBank accession number: KP642148) was cloned from ramie. BnbZIP2 has a 1416 base pair open reading frame, encoding a 471 amino acid protein containing a characteristic bZIP domain and a leucine zipper. BnbZIP2 shares high sequence similarity with bZIP factors from other plants. The BnbZIP2 protein is localized to both nuclei and cytoplasm. Transcripts of BnbZIP2 were found in various tissues in ramie, with significantly higher levels in female and male flowers. Its expression was induced by drought, high salinity, and abscisic acid treatments. Analysis of the cis-elements in promoters of BnbZIP2 identified cis-acting elements involved in growth, developmental processes, and a variety of stress responses. Transgenic Arabidopsis plants' overexpression of BnbZIP2 exhibited more sensitivity to drought and heavy metal Cd stress during seed germination, whereas more tolerance to high-salinity stress than the wild type during both seed germination and plant development. Thus, BnbZIP2 may act as a positive regulator in plants' response to high-salinity stress and be an important candidate gene for molecular breeding of salt-tolerant plants.

PpCBF3 from Cold-Tolerant Kentucky Bluegrass Involved in Freezing Tolerance Associated with Up-Regulation of Cold-Related Genes in Transgenic Arabidopsis thaliana

PubMed Central

Chen, Yu; Xu, Bin; Yang, Zhimin; Huang, Bingru

2015-01-01

Dehydration-Responsive Element Binding proteins (DREB)/C-repeat (CRT) Binding Factors (CBF) have been identified as transcriptional activators during plant responses to cold stress. The objective of this study was to determine the physiological roles of a CBF gene isolated from a cold-tolerant perennial grass species, Kentucky bluegrass (Poa pratensis L.), which designated as PpCBF3, in regulating plant tolerance to freezing stress. Transient transformation of Arabidopsis thaliana mesophyll protoplast with PpCBF3-eGFP fused protein showed that PpCBF3 was localized to the nucleus. RT-PCR analysis showed that PpCBF3 was specifically induced by cold stress (4°C) but not by drought stress [induced by 20% polyethylene glycol 6000 solution (PEG-6000)] or salt stress (150 mM NaCl). Transgenic Arabidopsis overexpressing PpCBF3 showed significant improvement in freezing (-20°C) tolerance demonstrated by a lower percentage of chlorotic leaves, lower cellular electrolyte leakage (EL) and H2O2 and O2 .- content, and higher chlorophyll content and photochemical efficiency compared to the wild type. Relative mRNA expression level analysis by qRT-PCR indicated that the improved freezing tolerance of transgenic Arabidopsis plants overexpressing PpCBF3 was conferred by sustained activation of downstream cold responsive (COR) genes. Other interesting phenotypic changes in the PpCBF3-transgenic Arabidopsis plants included late flowering and slow growth or ‘dwarfism’, both of which are desirable phenotypic traits for perennial turfgrasses. Therefore, PpCBF3 has potential to be used in genetic engineering for improvement of turfgrass freezing tolerance and other desirable traits. PMID:26177510

Leaf water relations and net gas exchange responses of salinized Carrizo citrange seedlings during drought stress and recovery.

PubMed

Pérez-Pérez, J G; Syvertsen, J P; Botía, P; García-Sánchez, F

2007-08-01

Since salinity and drought stress can occur together, an assessment was made of their interacting effects on leaf water relations, osmotic adjustment and net gas exchange in seedlings of the relatively chloride-sensitive Carrizo citrange, Citrus sinensis x Poncirus trifoliata. Plants were fertilized with nutrient solution with or without additional 100 mm NaCl (salt and no-salt treatments). After 7 d, half of the plants were drought stressed by withholding irrigation water for 10 d. Thus, there were four treatments: salinized and non-salinized plants under drought-stress or well-watered conditions. After the drought period, plants from all stressed treatments were re-watered with nutrient solution without salt for 8 d to study recovery. Leaf water relations, gas exchange parameters, chlorophyll fluorescence, proline, quaternary ammonium compounds and leaf and root concentrations of Cl(-) and Na(+) were measured. Salinity increased leaf Cl(-) and Na(+) concentrations and decreased osmotic potential (Psi(pi)) such that leaf relative water content (RWC) was maintained during drought stress. However, in non-salinized drought-stressed plants, osmotic adjustment did not occur and RWC decreased. The salinity-induced osmotic adjustment was not related to any accumulation of proline, quaternary ammonium compounds or soluble sugars. Net CO(2) assimilation rate (A(CO2)) was reduced in leaves from all stressed treatments but the mechanisms were different. In non-salinized drought-stressed plants, lower A(CO2) was related to low RWC, whereas in salinized plants decreased A(CO2) was related to high levels of leaf Cl(-) and Na(+). A(CO2) recovered after irrigation in all the treatments except in previously salinized drought-stressed leaves which had lower RWC and less chlorophyll but maintained high levels of Cl(-), Na(+) and quaternary ammonium compounds after recovery. High leaf levels of Cl(-) and Na(+) after recovery apparently came from the roots. Plants preconditioned by

cDNA-AFLP analysis reveals differential gene expression in response to salt stress in foxtail millet (Setaria italica L.).

PubMed

Jayaraman, Ananthi; Puranik, Swati; Rai, Neeraj Kumar; Vidapu, Sudhakar; Sahu, Pranav Pankaj; Lata, Charu; Prasad, Manoj

2008-11-01

Plant growth and productivity are affected by various abiotic stresses such as heat, drought, cold, salinity, etc. The mechanism of salt tolerance is one of the most important subjects in plant science as salt stress decreases worldwide agricultural production. In our present study we used cDNA-AFLP technique to compare gene expression profiles of a salt tolerant and a salt-sensitive cultivar of foxtail millet (Seteria italica) in response to salt stress to identify early responsive differentially expressed transcripts accumulated upon salt stress and validate the obtained result through quantitative real-time PCR (qRT-PCR). The expression profile was compared between a salt tolerant (Prasad) and susceptible variety (Lepakshi) of foxtail millet in both control condition (L0 and P0) and after 1 h (L1 and P1) of salt stress. We identified 90 transcript-derived fragments (TDFs) that are differentially expressed, out of which 86 TDFs were classified on the basis of their either complete presence or absence (qualitative variants) and 4 on differential expression pattern levels (quantitative variants) in the two varieties. Finally, we identified 27 non-redundant differentially expressed cDNAs that are unique to salt tolerant variety which represent different groups of genes involved in metabolism, cellular transport, cell signaling, transcriptional regulation, mRNA splicing, seed development and storage, etc. The expression patterns of seven out of nine such genes showed a significant increase of differential expression in tolerant variety after 1 h of salt stress in comparison to salt-sensitive variety as analyzed by qRT-PCR. The direct and indirect relationship of identified TDFs with salinity tolerance mechanism is discussed.

Global Expressions Landscape of NAC Transcription Factor Family and Their Responses to Abiotic Stresses in Citrullus lanatus

PubMed Central

Lv, Xiaolong; Lan, Shanrong; Guy, Kateta Malangisha; Yang, Jinghua; Zhang, Mingfang; Hu, Zhongyuan

2016-01-01

Watermelon (Citrullus lanatus) is one xerophyte that has relative higher tolerance to drought and salt stresses as well as more sensitivity to cold stress, compared with most model plants. These characteristics facilitate it a potential model crop for researches on salt, drought or cold tolerance. In this study, a genome-wide comprehensive analysis of the ClNAC transcription factor (TF) family was carried out for the first time, to investigate their transcriptional profiles and potential functions in response to these abiotic stresses. The expression profiling analysis reveals that several NAC TFs are highly responsive to abiotic stresses and development, for instance, subfamily IV NACs may play roles in maintaining water status under drought or salt conditions, as well as water and metabolites conduction and translocation toward fruit. In contrast, rapid and negative responses of most of the ClNACs to low-temperature adversity may be related to the sensitivity to cold stress. Crosstalks among these abiotic stresses and hormone (abscisic acid and jasmonic acid) pathways were also discussed based on the expression of ClNAC genes. Our results will provide useful insights for the functional mining of NAC family in watermelon, as well as into the mechanisms underlying abiotic tolerance in other cash crops. PMID:27491393

Global Expressions Landscape of NAC Transcription Factor Family and Their Responses to Abiotic Stresses in Citrullus lanatus.

PubMed

Lv, Xiaolong; Lan, Shanrong; Guy, Kateta Malangisha; Yang, Jinghua; Zhang, Mingfang; Hu, Zhongyuan

2016-08-05

Watermelon (Citrullus lanatus) is one xerophyte that has relative higher tolerance to drought and salt stresses as well as more sensitivity to cold stress, compared with most model plants. These characteristics facilitate it a potential model crop for researches on salt, drought or cold tolerance. In this study, a genome-wide comprehensive analysis of the ClNAC transcription factor (TF) family was carried out for the first time, to investigate their transcriptional profiles and potential functions in response to these abiotic stresses. The expression profiling analysis reveals that several NAC TFs are highly responsive to abiotic stresses and development, for instance, subfamily IV NACs may play roles in maintaining water status under drought or salt conditions, as well as water and metabolites conduction and translocation toward fruit. In contrast, rapid and negative responses of most of the ClNACs to low-temperature adversity may be related to the sensitivity to cold stress. Crosstalks among these abiotic stresses and hormone (abscisic acid and jasmonic acid) pathways were also discussed based on the expression of ClNAC genes. Our results will provide useful insights for the functional mining of NAC family in watermelon, as well as into the mechanisms underlying abiotic tolerance in other cash crops.

Overexpression of WsSGTL1 Gene of Withania somnifera Enhances Salt Tolerance, Heat Tolerance and Cold Acclimation Ability in Transgenic Arabidopsis Plants

PubMed Central

Mishra, Manoj K.; Chaturvedi, Pankaj; Singh, Ruchi; Singh, Gaurav; Sharma, Lokendra K.; Pandey, Vibha; Kumari, Nishi; Misra, Pratibha

2013-01-01

Background Sterol glycosyltrnasferases (SGT) are enzymes that glycosylate sterols which play important role in plant adaptation to stress and are medicinally important in plants like Withania somnifera. The present study aims to find the role of WsSGTL1 which is a sterol glycosyltransferase from W. somnifera, in plant’s adaptation to abiotic stress. Methodology The WsSGTL1 gene was transformed in Arabidopsis thaliana through Agrobacterium mediated transformation, using the binary vector pBI121, by floral dip method. The phenotypic and physiological parameters like germination, root length, shoot weight, relative electrolyte conductivity, MDA content, SOD levels, relative electrolyte leakage and chlorophyll measurements were compared between transgenic and wild type Arabidopsis plants under different abiotic stresses - salt, heat and cold. Biochemical analysis was done by HPLC-TLC and radiolabelled enzyme assay. The promoter of the WsSGTL1 gene was cloned by using Genome Walker kit (Clontech, USA) and the 3D structures were predicted by using Discovery Studio Ver. 2.5. Results The WsSGTL1 transgenic plants were confirmed to be single copy by Southern and homozygous by segregation analysis. As compared to WT, the transgenic plants showed better germination, salt tolerance, heat and cold tolerance. The level of the transgene WsSGTL1 was elevated in heat, cold and salt stress along with other marker genes such as HSP70, HSP90, RD29, SOS3 and LEA4-5. Biochemical analysis showed the formation of sterol glycosides and increase in enzyme activity. When the promoter of WsSGTL1 gene was cloned from W. somnifera and sequenced, it contained stress responsive elements. Bioinformatics analysis of the 3D structure of the WsSGTL1 protein showed functional similarity with sterol glycosyltransferase AtSGT of A. thaliana. Conclusions Transformation of WsSGTL1 gene in A. thaliana conferred abiotic stress tolerance. The promoter of the gene in W.somnifera was found to have stress

Acclimation to short-term low temperatures in two Eucalyptus globulus clones with contrasting drought resistance.

PubMed

Costa E Silva, F; Shvaleva, A; Broetto, F; Ortuño, M F; Rodrigues, M L; Almeida, M H; Chaves, M M; Pereira, J S

2009-01-01

We tested the hypothesis that Eucalyptus globulus Labill. genotypes that are more resistant to dry environments might also exhibit higher cold tolerances than drought-sensitive plants. The effect of low temperatures was evaluated in acclimated and unacclimated ramets of a drought-resistant clone (CN5) and a drought-sensitive clone (ST51) of E. globulus. We studied the plants' response via leaf gas exchanges, leaf water and osmotic potentials, concentrations of soluble sugars, several antioxidant enzymes and leaf electrolyte leakage. Progressively lowering air temperatures (from 24/16 to 10/-2 degrees C, day/night) led to acclimation of both clones. Acclimated ramets exhibited higher photosynthetic rates, stomatal conductances and lower membrane relative injuries when compared to unacclimated ramets. Moreover, low temperatures led to significant increases of soluble sugars and antioxidant enzymes activity (glutathione reductase, ascorbate peroxidase and superoxide dismutases) of both clones in comparison to plants grown at control temperature (24/16 degrees C). On the other hand, none of the clones, either acclimated or not, exhibited signs of photoinhibition under low temperatures and moderate light. The main differences in the responses to low temperatures between the two clones resulted mainly from differences in carbon metabolism, including a higher accumulation of soluble sugars in the drought-resistant clone CN5 as well as a higher capacity for osmotic regulation, as compared to the drought-sensitive clone ST51. Although membrane injury data suggested that both clones had the same inherent freezing tolerance before and after cold acclimation, the results also support the hypothesis that the drought-resistant clone had a greater cold tolerance at intermediate levels of acclimation than the drought-sensitive clone. A higher capacity to acclimate in a short period can allow a clone to maintain an undamaged leaf surface area along sudden frost events, increasing

Cloning of Gossypium hirsutum Sucrose Non-Fermenting 1-Related Protein Kinase 2 Gene (GhSnRK2) and Its Overexpression in Transgenic Arabidopsis Escalates Drought and Low Temperature Tolerance

PubMed Central

Bello, Babatunde; Zhang, Xueyan; Liu, Chuanliang; Yang, Zhaoen; Yang, Zuoren; Wang, Qianhua; Zhao, Ge; Li, Fuguang

2014-01-01

The molecular mechanisms of stress tolerance and the use of modern genetics approaches for the improvement of drought stress tolerance have been major focuses of plant molecular biologists. In the present study, we cloned the Gossypium hirsutum sucrose non-fermenting 1-related protein kinase 2 (GhSnRK2) gene and investigated its functions in transgenic Arabidopsis. We further elucidated the function of this gene in transgenic cotton using virus-induced gene silencing (VIGS) techniques. We hypothesized that GhSnRK2 participates in the stress signaling pathway and elucidated its role in enhancing stress tolerance in plants via various stress-related pathways and stress-responsive genes. We determined that the subcellular localization of the GhSnRK2-green fluorescent protein (GFP) was localized in the nuclei and cytoplasm. In contrast to wild-type plants, transgenic plants overexpressing GhSnRK2 exhibited increased tolerance to drought, cold, abscisic acid and salt stresses, suggesting that GhSnRK2 acts as a positive regulator in response to cold and drought stresses. Plants overexpressing GhSnRK2 displayed evidence of reduced water loss, turgor regulation, elevated relative water content, biomass, and proline accumulation. qRT-PCR analysis of GhSnRK2 expression suggested that this gene may function in diverse tissues. Under normal and stress conditions, the expression levels of stress-inducible genes, such as AtRD29A, AtRD29B, AtP5CS1, AtABI3, AtCBF1, and AtABI5, were increased in the GhSnRK2-overexpressing plants compared to the wild-type plants. GhSnRK2 gene silencing alleviated drought tolerance in cotton plants, indicating that VIGS technique can certainly be used as an effective means to examine gene function by knocking down the expression of distinctly expressed genes. The results of this study suggested that the GhSnRK2 gene, when incorporated into Arabidopsis, functions in positive responses to drought stress and in low temperature tolerance. PMID:25393623

A discrete stage-structured model of California newt population dynamics during a period of drought.

PubMed

Jones, Marjorie T; Milligan, William R; Kats, Lee B; Vandergon, Thomas L; Honeycutt, Rodney L; Fisher, Robert N; Davis, Courtney L; Lucas, Timothy A

2017-02-07

We introduce a mathematical model for studying the population dynamics under drought of the California newt (Taricha torosa), a species of special concern in the state of California. Since 2012, California has experienced a record-setting drought, and multiple studies predict drought conditions currently underway will persist and even increase in severity. Recent declines and local extinctions of California newt populations in Santa Monica Mountain streams motivate our study of the impact of drought on newt population sizes. Although newts are terrestrial salamanders, they migrate to streams each spring to breed and lay eggs. Since egg and larval stages occur in water, a precipitation deficit due to drought conditions reduces the space for newt egg-laying and the necessary habitat for larval development. To mathematically forecast newt population dynamics, we develop a nonlinear system of discrete equations that includes demographic parameters such as survival rates for newt life stages and egg production, which depend on habitat availability and rainfall. We estimate these demographic parameters using 15 years of stream survey data collected from Cold Creek in Los Angeles County, California, and our model captures the observed decline of the parameterized Cold Creek newt population. Based upon data analysis, we predict how the number of available newt egg-laying sites varies with annual precipitation. Our model allows us to make predictions about how the length and severity of drought can affect the likelihood of persistence and the time to critical endangerment of a local newt population. We predict that sustained severe drought will critically endanger the newt population but that the newt population can rebound if a drought is sufficiently short. Copyright © 2016 Elsevier Ltd. All rights reserved.

A discrete stage-structured model of California newt population dynamics during a period of drought

USGS Publications Warehouse

Jones, Marjorie T.; Milligan, William R.; Kats, Lee B.; Vandergon, Thomas L.; Honeycutt, Rodney L.; Fisher, Robert N.; Davis, Courtney L.; Lucas, Timothy A.

2017-01-01

We introduce a mathematical model for studying the population dynamics under drought of the California newt (Taricha torosa), a species of special concern in the state of California. Since 2012, California has experienced a record-setting drought, and multiple studies predict drought conditions currently underway will persist and even increase in severity. Recent declines and local extinctions of California newt populations in Santa Monica Mountain streams motivate our study of the impact of drought on newt population sizes. Although newts are terrestrial salamanders, they migrate to streams each spring to breed and lay eggs. Since egg and larval stages occur in water, a precipitation deficit due to drought conditions reduces the space for newt egg-laying and the necessary habitat for larval development. To mathematically forecast newt population dynamics, we develop a nonlinear system of discrete equations that includes demographic parameters such as survival rates for newt life stages and egg production, which depend on habitat availability and rainfall. We estimate these demographic parameters using 15 years of stream survey data collected from Cold Creek in Los Angeles County, California, and our model captures the observed decline of the parameterized Cold Creek newt population. Based upon data analysis, we predict how the number of available newt egg-laying sites varies with annual precipitation. Our model allows us to make predictions about how the length and severity of drought can affect the likelihood of persistence and the time to critical endangerment of a local newt population. We predict that sustained severe drought will critically endanger the newt population but that the newt population can rebound if a drought is sufficiently short.

Trichostatin A Selectively Suppresses the Cold-Induced Transcription of the ZmDREB1 Gene in Maize

PubMed Central

Hu, Yong; Zhang, Lu; Zhao, Lin; Li, Jun; He, Shibin; Zhou, Kun; Yang, Fei; Huang, Min; Jiang, Li; Li, Lijia

2011-01-01

Post-translational modifications of histone proteins play a crucial role in responding to environmental stresses. Histone deacetylases (HDACs) catalyze the removal of an acetyl group from histones and are generally believed to be a transcriptional repressor. In this paper, we report that cold treatment highly induces the up-regulation of HDACs, leading to global deacetylation of histones H3 and H4. Treatment of maize with the HDAC inhibitor trichostatin A (TSA) under cold stress conditions strongly inhibits induction of the maize cold-responsive genes ZmDREB1 and ZmCOR413. However, up-regulation of the ZmICE1 gene in response to cold stress is less affected. The expression of drought and salt induced genes, ZmDBF1 and rab17, is almost unaffected by TSA treatment. Thus, these observations show that HDACs may selectively activate transcription. The time course of TSA effects on the expression of ZmDREB1 and ZmCOR413 genes indicates that HDACs appear to directly activate the ZmDREB1 gene, which in turn modulates ZmCOR413 expression. After cold treatment, histone hyperacetylation and DNA demethylation occurs in the ICE1 binding region, accompanied by an increase in accessibility to micrococcal nuclease (MNase). The two regions adjacent to the ICE1 binding site remain hypoacetylated and methylated. However, during cold acclimation, TSA treatment increases the acetylation status and accessibility of MNase and decreases DNA methylation at these two regions. However, TSA treatment does not affect histone hyperacetylation and DNA methylation levels at the ICE1 binding regions of the ZmDREB1 gene. Altogether, our findings indicate that HDACs positively regulate the expression of the cold-induced ZmDREB1 gene through histone modification and chromatin conformational changes and that this activation is both gene and site selective. PMID:21811564

16-year Climatology of Cold-Season Extreme Precipitation-Drought Statistics derived from NLDAS Precipitation Data Over the Conterminous U.S.

NASA Astrophysics Data System (ADS)

Matsui, T.; Mocko, D. M.

2015-12-01

We examine radar-gauge merged 1/8-degree hourly precipitation data from the North American Land Data Assimilation System (NLDAS) Phase-II datasets from 1997 to 2013. For each 1/8 grid, we derived statistics of single-event storm duration, total accumulated precipitation, and dry period between each storm events during cold (Oct-Mar) seasons, and histogram of event-by-event statistics are used to estimate the thresholds for extreme (below-1%) and very extreme (below-0.1%) events. In this way, we constructed unique climatology maps of the extreme precipitation-drought frequencies and probability density functions. This climatology map depicted that cold-season extremely heavy precipitation events are populated over West Coast, Deep South, and coastal zone of North East, suggesting impacts of land-falling maritime storm systems. Simultaneously, datasets depicts that long-extended precipitation events are mostly populated over North West, and lower Mississippi Basin up to North East centered at Appalachian Mountains, resembling east Pacific storm tracks and nor'easter storm tracks, respectively. Furthermore, season-by-season statistics of these extreme events were examined for each National Climate Assessment (NCA) regimes in comparison with a number of major atmospheric oscillations and teleconnection patterns as well as Arctic Amplifications. Index of Arctic Amplification includes variability of 500mb zonal wind speed and pole-to-midlatitude differences in atmospheric thickness, linking to the phase speed of the Rossby wave. Finally, we present ensemble correlations scores, and discuss the physical processes and underlying mechanisms for their key characteristics as well as the predictive skill and predictability of the extreme events from sub-seasonal to interannual scales during cold seasons.

miR394 and LCR are involved in Arabidopsis salt and drought stress responses in an abscisic acid-dependent manner

PubMed Central

2013-01-01

Background MicroRNAs (miRNAs) are a class of short, endogenous non-coding small RNAs that have ability to base pair with their target mRNAs to induce their degradation in plants. miR394a/b are conserved small RNAs and its target gene LCR (LEAF CURLING RESPONSIVENESS) encodes an F-box protein (SKP1-Cullin/CDC53-F-box) but whether miR394a/b and its target gene LCR are involved in regulation of plant response to abscisic acid (ABA) and abiotic stresses is unknown. Results Mature miR394 and precursor miR394a/b are shown to be slightly induced by ABA. By contrast, LCR expression is depressed by ABA. Analysis of LCR and its promoter (pLCR::GUS) revealed that LCR is expressed at all development stages. MIR394a/b over-expression (35S::MIR394a/b) and lcr (LCR loss of function) mutant plants are hypersensitive to salt stress, but LCR over-expressing (35S::m5LCR) plants display the salt-tolerant phenotype. Both 35S::MIR394a/b and lcr plants are highly tolerant to severe drought stress compared with wild-type, but 35S::m5LCR plants are susceptible to water deficiency. Over-expression of MIR394a/b led to ABA hypersensitivity and ABA-associated phenotypes, whereas 35S::m5LCR plants show ABA resistance phenotypes. Moreover, 35S::MIR394a/b plants accumulated higher levels of ABA-induced hydrogen peroxide and superoxide anion radicals than wild-type and 35S::m5LCR plants. Expressions of ABA- and stress-responsive genes, ABI3, ABI4, ABI5, ABF3, and ABF4 are up-regulated in MIR394a/b over-expressing plants but down-regulated in 35S::m5LCR plants. Over-expression of MIR394a in abi4-1 or abi5-1 background resulted in loss of ABA-sensitivity in 35S::MIR394a plants. Conclusions The silencing of LCR mRNA by miR394 is essential to maintain a certain phenotype favorable for the adaptive response to abiotic stresses. The contrasting phenotypes of salt and drought responses may be mediated by a functional balance between miR394 and LCR. If the balance is perturbed in case of the abiotic

miR394 and LCR are involved in Arabidopsis salt and drought stress responses in an abscisic acid-dependent manner.

PubMed

Song, Jian Bo; Gao, Shuai; Sun, Di; Li, Hua; Shu, Xia Xia; Yang, Zhi Min

2013-12-11

MicroRNAs (miRNAs) are a class of short, endogenous non-coding small RNAs that have ability to base pair with their target mRNAs to induce their degradation in plants. miR394a/b are conserved small RNAs and its target gene LCR (LEAF CURLING RESPONSIVENESS) encodes an F-box protein (SKP1-Cullin/CDC53-F-box) but whether miR394a/b and its target gene LCR are involved in regulation of plant response to abscisic acid (ABA) and abiotic stresses is unknown. Mature miR394 and precursor miR394a/b are shown to be slightly induced by ABA. By contrast, LCR expression is depressed by ABA. Analysis of LCR and its promoter (pLCR::GUS) revealed that LCR is expressed at all development stages. MIR394a/b over-expression (35S::MIR394a/b) and lcr (LCR loss of function) mutant plants are hypersensitive to salt stress, but LCR over-expressing (35S::m5LCR) plants display the salt-tolerant phenotype. Both 35S::MIR394a/b and lcr plants are highly tolerant to severe drought stress compared with wild-type, but 35S::m5LCR plants are susceptible to water deficiency. Over-expression of MIR394a/b led to ABA hypersensitivity and ABA-associated phenotypes, whereas 35S::m5LCR plants show ABA resistance phenotypes. Moreover, 35S::MIR394a/b plants accumulated higher levels of ABA-induced hydrogen peroxide and superoxide anion radicals than wild-type and 35S::m5LCR plants. Expressions of ABA- and stress-responsive genes, ABI3, ABI4, ABI5, ABF3, and ABF4 are up-regulated in MIR394a/b over-expressing plants but down-regulated in 35S::m5LCR plants. Over-expression of MIR394a in abi4-1 or abi5-1 background resulted in loss of ABA-sensitivity in 35S::MIR394a plants. The silencing of LCR mRNA by miR394 is essential to maintain a certain phenotype favorable for the adaptive response to abiotic stresses. The contrasting phenotypes of salt and drought responses may be mediated by a functional balance between miR394 and LCR. If the balance is perturbed in case of the abiotic stress, an identical phenotype

Drought-induced gene expression in Atriplex canescens (salt bush): Transcriptional and post transcriptional response

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cairney, J.; Hays, D.; Stockand, J.D.

1991-05-01

The rangeland shrub Atriplex canescens (saltbush) is extremely drought-tolerant and is capable of growing at water potentials below {minus}40 bar. To discover the molecular basis of this tolerance, the authors have isolated a number of cDNA clones of drought-stress induced genes. Analysis of the nucleotide sequence and expression of these genes in different tissues and in response to different stresses reveals the diversity of the stress response. Members of a drought-induced, multi-gene family, have been sequenced. Although 95% homologous, non-conservative substitutions result in proteins of different tertiary structure. Additionally, the genes are expressed through a number of mature forms ofmore » mRNA which may arise by alternative RNA processing.« less

Early growth interactions between a mangrove and an herbaceous salt marsh species are not affected by elevated CO2 or drought

NASA Astrophysics Data System (ADS)

Howard, Rebecca J.; Stagg, Camille L.; Utomo, Herry S.

2018-07-01

Increasing atmospheric carbon dioxide (CO2) concentrations are likely to influence future distributions of plants and plant community structure in many regions of the world through effects on photosynthetic rates. In recent decades the encroachment of woody mangrove species into herbaceous marshes has been documented along the U.S. northern Gulf of Mexico coast. These species shifts have been attributed primarily to rising sea levels and warming winter temperatures, but the role of elevated CO2 and water availability may become more prominent drivers of species interactions under future climate conditions. Drought has been implicated as a major factor contributing to salt marsh vegetation dieback in this region. In this greenhouse study we examined the effects of CO2 concentration (∼380 ppm, ∼700 ppm) and water regime (drought, saturated, flooded) on early growth of Avicennia germinans, a C3 mangrove species, and Spartina alterniflora, a C4 grass. Plants were grown in monocultures and in a mixed-species assemblage. We found that neither species responded to elevated CO2 over the 10-month duration of the experiment, and there were few interactions between experimental factors. Two effects of water regime were documented: lower A. germinans pneumatophore biomass under drought conditions, and lower belowground biomass under flooded conditions regardless of planting assemblage. Evidence of interspecific interactions was noted. Competition for aboveground resources (e.g., light) was indicated by lower S. alterniflora stem biomass in mixed-species assemblage compared to biomass in S. alterniflora monocultures. Pneumatophore biomass of A. germinans was reduced when grown in monoculture compared to the mixed-species assemblage, indicating competition for belowground resources. These interactions provide insight into how these species may respond following major disturbance events that lead to vegetation dieback. Site variation in propagule availability and physico

Anatomical regulation of ice nucleation and cavitation helps trees to survive freezing and drought stress

PubMed Central

Lintunen, A.; Hölttä, T.; Kulmala, M.

2013-01-01

Water in the xylem, the water transport system of plants, is vulnerable to freezing and cavitation, i.e. to phase change from liquid to ice or gaseous phase. The former is a threat in cold and the latter in dry environmental conditions. Here we show that a small xylem conduit diameter, which has previously been shown to be associated with lower cavitation pressure thus making a plant more drought resistant, is also associated with a decrease in the temperature required for ice nucleation in the xylem. Thus the susceptibility of freezing and cavitation are linked together in the xylem of plants. We explain this linkage by the regulation of the sizes of the nuclei catalysing freezing and drought cavitation. Our results offer better understanding of the similarities of adaption of plants to cold and drought stress, and offer new insights into the ability of plants to adapt to the changing environment. PMID:23778457

Tree ring-based seven-century drought records for the Western Himalaya, India

NASA Astrophysics Data System (ADS)

Yadav, Ram R.

2013-05-01

The paucity of available instrumental climate records in cold and arid regions of the western Himalaya, India, hampers our understanding of the long-term variability of regional droughts, which seriously affect the agrarian economy of the region. Using ring width chronologies of Cedrus deodara and Pinus gerardiana together from a network of moisture-stressed sites, Palmer Drought Severity Index values for October-May back to 1310 A.D. were developed. The twentieth century features dominant decadal-scale pluvial phases (1981-1995, 1952-1968, and 1918-1934) as compared to the severe droughts in the early seventeenth century (1617-1640) as well as late fifteenth to early sixteenth (1491-1526) centuries. The drought anomalies are positively (negatively) associated with central Pacific (Indo-Pacific Warm Pool) sea surface temperature anomalies. However, non-stationarity in such relationships appears to be the major riddle in the predictability of long-term droughts much needed for the sustainable development of the ecologically sensitive region of the Himalayas.

Soybean Salt Tolerance 1 (GmST1) Reduces ROS Production, Enhances ABA Sensitivity, and Abiotic Stress Tolerance in Arabidopsis thaliana.

PubMed

Ren, Shuxin; Lyle, Chimera; Jiang, Guo-Liang; Penumala, Abhishek

2016-01-01

Abiotic stresses, including high soil salinity, significantly reduce crop production worldwide. Salt tolerance in plants is a complex trait and is regulated by multiple mechanisms. Understanding the mechanisms and dissecting the components on their regulatory pathways will provide new insights, leading to novel strategies for the improvement of salt tolerance in agricultural and economic crops of importance. Here we report that soybean salt tolerance 1, named GmST1, exhibited strong tolerance to salt stress in the Arabidopsis transgenic lines. The GmST1-overexpressed Arabidopsis also increased sensitivity to ABA and decreased production of reactive oxygen species under salt stress. In addition, GmST1 significantly improved drought tolerance in Arabidopsis transgenic lines. GmST1 belongs to a 3-prime part of Glyma.03g171600 gene in the current version of soybean genome sequence annotation. However, comparative reverse transcription-polymerase chain reaction analysis around Glyma.03g171600 genomic region confirmed that GmST1 might serve as an intact gene in soybean leaf tissues. Unlike Glyma.03g171600 which was not expressed in leaves, GmST1 was strongly induced by salt treatment in the leaf tissues. By promoter analysis, a TATA box was detected to be positioned close to GmST1 start codon and a putative ABRE and a DRE cis-acting elements were identified at about 1 kb upstream of GmST1 gene. The data also indicated that GmST1-transgenic lines survived under drought stress and showed a significantly lower water loss than non-transgenic lines. In summary, our results suggest that overexpression of GmST1 significantly improves Arabidopsis tolerance to both salt and drought stresses and the gene may be a potential candidate for genetic engineering of salt- and drought-tolerant crops.

High-resolution near real-time drought monitoring in South Asia

NASA Astrophysics Data System (ADS)

Aadhar, Saran; Mishra, Vimal

2017-10-01

Drought in South Asia affect food and water security and pose challenges for millions of people. For policy-making, planning, and management of water resources at sub-basin or administrative levels, high-resolution datasets of precipitation and air temperature are required in near-real time. We develop a high-resolution (0.05°) bias-corrected precipitation and temperature data that can be used to monitor near real-time drought conditions over South Asia. Moreover, the dataset can be used to monitor climatic extremes (heat and cold waves, dry and wet anomalies) in South Asia. A distribution mapping method was applied to correct bias in precipitation and air temperature, which performed well compared to the other bias correction method based on linear scaling. Bias-corrected precipitation and temperature data were used to estimate Standardized precipitation index (SPI) and Standardized Precipitation Evapotranspiration Index (SPEI) to assess the historical and current drought conditions in South Asia. We evaluated drought severity and extent against the satellite-based Normalized Difference Vegetation Index (NDVI) anomalies and satellite-driven Drought Severity Index (DSI) at 0.05°. The bias-corrected high-resolution data can effectively capture observed drought conditions as shown by the satellite-based drought estimates. High resolution near real-time dataset can provide valuable information for decision-making at district and sub-basin levels.

High-Resolution Near Real-Time Drought Monitoring in South Asia

NASA Astrophysics Data System (ADS)

Aadhar, S.; Mishra, V.

2017-12-01

Drought in South Asia affect food and water security and pose challenges for millions of people. For policy-making, planning and management of water resources at the sub-basin or administrative levels, high-resolution datasets of precipitation and air temperature are required in near-real time. Here we develop a high resolution (0.05 degree) bias-corrected precipitation and temperature data that can be used to monitor near real-time drought conditions over South Asia. Moreover, the dataset can be used to monitor climatic extremes (heat waves, cold waves, dry and wet anomalies) in South Asia. A distribution mapping method was applied to correct bias in precipitation and air temperature (maximum and minimum), which performed well compared to the other bias correction method based on linear scaling. Bias-corrected precipitation and temperature data were used to estimate Standardized precipitation index (SPI) and Standardized Precipitation Evapotranspiration Index (SPEI) to assess the historical and current drought conditions in South Asia. We evaluated drought severity and extent against the satellite-based Normalized Difference Vegetation Index (NDVI) anomalies and satellite-driven Drought Severity Index (DSI) at 0.05˚. We find that the bias-corrected high-resolution data can effectively capture observed drought conditions as shown by the satellite-based drought estimates. High resolution near real-time dataset can provide valuable information for decision-making at district and sub- basin levels.

RdreB1BI enhances drought tolerance by activating AQP-related genes in transgenic strawberry.

PubMed

Gu, Xianbin; Gao, Zhihong; Yan, Yichao; Wang, Xiuyun; Qiao, Yushan; Chen, Yahua

2017-10-01

The dehydration-responsive element binding protein (DREB) family of transcription factors is associated with abiotic stress responses during plant growth and development. This study focussed on the subfamily member DREB1B, which was initially described as highly and specifically responsive to low temperature. However, here it is shown that DREB1B is not only involved in cold tolerance but also other abiotic stress tolerances, such as that of drought. To further understand the genetic improvement effects of the drought tolerance provided by RdreB1BI in transgenic strawberry, drought stress responses of transgenic plants were evaluated at the morphological, physiological, and transcriptional levels. Transactivation assays revealed that RdreB1BI could activate the FvPIP2;1 like 1 promoter. RdreB1BI transgenic plants showed enhanced drought tolerance on the basis of lower rates of electrolyte leakage (EL), higher relative water content (RWC), and less stomatal aperture as well as increased peroxidase (POD) and superoxide dismutase (SOD) activities and less malondialdehyde (MDA) accumulation. The transgenic plants also accumulated higher levels of drought-related regulatory genes and functional gene transcripts, including those of PIP, NAC, RD22, ABI, and NCED. Together, these results demonstrate that RdreB1BI plays an essential role in the regulation of the drought stress response. DREB1B transcription constitutes a useful strategy to exploit in transgenic plants for coping with abiotic stresses, at least cold and drought stresses. The approach may be helpful for genetic engineering horticultural plants to have increased environmental adaptations. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

Simulation of a Severe Autumn/Winter Drought in Eastern China by Regional Atmospheric Modeling System(RAMS)

NASA Astrophysics Data System (ADS)

Meng, Chunchun; Ma, Yaoming

2016-04-01

Compared with European Centre for Medium-Range Weather Forecasts (ERA-interim) Reanalysis data and Global Summary Of Day (GSOD) observation data, the outcomes from RAMS of the 2008/2009 severe autumn/winter drought in eastern china are analyzed in this study. The reanalysis data showed that most parts of north China are controlled by northwest wind which was accompanied by cold air, the warm and moist air from South Sea is so weak to meet with cold air, therefore forming a circulation which is unfavorable for the formation of precipitation over Eastern China. RAMS performs very well over the simulation of this atmospheric circulation, so do the rainfall and air temperature over China and where the drought occurred. Meanwhile, the simulation of the time series of precipitation and temperature behaves excellent, the square of correlation coefficient between simulations and observations reached above 0.8. Although the performance of RAMS on this drought simulation is fairly accurate, there is amount of research work to be continued to complete a more realistic simulation. KEY WORDS RAMS; severe drought; numerical simulation; atmospheric circulation; precipitation and air temperature

Five novel transcription factors as potential regulators of OsNHX1 gene expression in a salt tolerant rice genotype.

PubMed

Almeida, Diego M; Gregorio, Glenn B; Oliveira, M Margarida; Saibo, Nelson J M

2017-01-01

This manuscript reports the identification and characterization of five transcription factors binding to the promoter of OsNHX1 in a salt stress tolerant rice genotype (Hasawi). Although NHX1 encoding genes are known to be highly regulated at the transcription level by different abiotic stresses, namely salt and drought stress, until now only one transcription factor (TF) binding to its promoter has been reported. In order to unveil the TFs regulating NHX1 gene expression, which is known to be highly induced under salt stress, we have used a Y1H system to screen a salt induced rice cDNA expression library from Hasawi. This approach allowed us to identify five TFs belonging to three distinct TF families: one TCP (OsPCF2), one CPP (OsCPP5) and three NIN-like (OsNIN-like2, OsNIN-like3 and OsNIN-like4) binding to the OsNHX1 gene promoter. We have also shown that these TFs act either as transcriptional activators (OsPCF2, OsNIN-like4) or repressors (OsCPP5, OsNIN-like2) and their encoding genes are differentially regulated by salt and PEG-induced drought stress in two rice genotypes, Nipponbare (salt-sensitive) and Hasawi (salt-tolerant). The transactivation activity of OsNIN-like3 was not possible to determine. Increased soil salinity has a direct impact on the reduction of plant growth and crop yield and it is therefore fundamental to understand the molecular mechanisms underlying gene expression regulation under adverse environmental conditions. OsNHX1 is the most abundant K + -Na + /H + antiporter localized in the tonoplast and its gene expression is induced by salt, drought and ABA. To investigate how OsNHX1 is transcriptionally regulated in response to salt stress in a salt-tolerant rice genotype (Hasawi), a salt-stress-induced cDNA expression library was constructed and subsequently screened using the yeast one-hybrid system and the OsNHX1 promoter as bait. Five transcription factors (TFs) belonging to three distinct TF families: one TCP (OsPCF2), one CPP (Os

Transcription Factors and Plants Response to Drought Stress: Current Understanding and Future Directions

PubMed Central

Joshi, Rohit; Wani, Shabir H.; Singh, Balwant; Bohra, Abhishek; Dar, Zahoor A.; Lone, Ajaz A.; Pareek, Ashwani; Singla-Pareek, Sneh L.

2016-01-01

Increasing vulnerability of plants to a variety of stresses such as drought, salt and extreme temperatures poses a global threat to sustained growth and productivity of major crops. Of these stresses, drought represents a considerable threat to plant growth and development. In view of this, developing staple food cultivars with improved drought tolerance emerges as the most sustainable solution toward improving crop productivity in a scenario of climate change. In parallel, unraveling the genetic architecture and the targeted identification of molecular networks using modern “OMICS” analyses, that can underpin drought tolerance mechanisms, is urgently required. Importantly, integrated studies intending to elucidate complex mechanisms can bridge the gap existing in our current knowledge about drought stress tolerance in plants. It is now well established that drought tolerance is regulated by several genes, including transcription factors (TFs) that enable plants to withstand unfavorable conditions, and these remain potential genomic candidates for their wide application in crop breeding. These TFs represent the key molecular switches orchestrating the regulation of plant developmental processes in response to a variety of stresses. The current review aims to offer a deeper understanding of TFs engaged in regulating plant’s response under drought stress and to devise potential strategies to improve plant tolerance against drought. PMID:27471513

Stress Corrosion Cracking of Annealed and Cold Worked Titanium Grade 7 and Alloy 22 in 110 C Concentrated Salt Environments

DOE Office of Scientific and Technical Information (OSTI.GOV)

P. Andresen

2000-11-08

Stress corrosion crack growth studies have been performed on annealed and cold worked Titanium Grade 7 and Alloy 22 in 110 C, aerated, concentrated, high pH salt environments characteristic of concentrated ground water. Following a very careful transition from fatigue precracking conditions to SCC conditions, the long term behavior under very stable conditions was monitored using reversing dc potential drop. Titanium Grade 7 exhibited continuous crack growth under both near-static and complete static loading conditions. Alloy 22 exhibited similar growth rates, but was less prone to maintain stable crack growth as conditions approached fully static loading.

Drought

Treesearch

John W. Coulston

2009-01-01

Drought occurrence is a function of temperature, moisture, and soil characteristics. In some regions, such as much of the Western United States, drought is a regular occurrence, while in others, such as the Northeastern United States, drought occurs on an irregular basis. Moderate drought stress tends to slow plant growth while severe drought stress also reduces...

Particulate pollutants are capable to 'degrade' epicuticular waxes and to decrease the drought tolerance of Scots pine (Pinus sylvestris L.).

PubMed

Burkhardt, Juergen; Pariyar, Shyam

2014-01-01

Air pollution causes the amorphous appearance of epicuticular waxes in conifers, usually called wax 'degradation' or 'erosion', which is often correlated with tree damage symptoms, e.g., winter desiccation. Previous investigations concentrated on wax chemistry, with little success. Here, we address the hypothesis that both 'wax degradation' and decreasing drought tolerance of trees may result from physical factors following the deposition of salt particles onto the needles. Pine seedlings were sprayed with dry aerosols or 50 mM solutions of different salts. The needles underwent humidity changes within an environmental scanning electron microscope, causing salt expansion on the surface and into the epistomatal chambers. The development of amorphous wax appearance by deliquescent salts covering tubular wax fibrils was demonstrated. The minimum epidermal conductance of the sprayed pine seedlings increased. Aerosol deposition potentially 'degrades' waxes and decreases tree drought tolerance. These effects have not been adequately considered thus far in air pollution research. Copyright © 2013 Elsevier Ltd. All rights reserved.

On the Effect of Sodium Chloride and Sodium Sulfate on Cold Denaturation

PubMed Central

Pica, Andrea; Graziano, Giuseppe

2015-01-01

Both sodium chloride and sodium sulfate are able to stabilize yeast frataxin, causing an overall increase of its thermodynamic stability curve, with a decrease in the cold denaturation temperature and an increase in the hot denaturation one. The influence of low concentrations of these two salts on yeast frataxin stability can be assessed by the application of a theoretical model based on scaled particle theory. First developed to figure out the mechanism underlying cold denaturation in water, this model is able to predict the stabilization of globular proteins provided by these two salts. The densities of the salt solutions and their temperature dependence play a fundamental role. PMID:26197394

Empirical analysis of farmers' drought risk perception: objective factors, personal circumstances, and social influence.

PubMed

Duinen, Rianne van; Filatova, Tatiana; Geurts, Peter; Veen, Anne van der

2015-04-01

Drought-induced water shortage and salinization are a global threat to agricultural production. With climate change, drought risk is expected to increase as drought events are assumed to occur more frequently and to become more severe. The agricultural sector's adaptive capacity largely depends on farmers' drought risk perceptions. Understanding the formation of farmers' drought risk perceptions is a prerequisite to designing effective and efficient public drought risk management strategies. Various strands of literature point at different factors shaping individual risk perceptions. Economic theory points at objective risk variables, whereas psychology and sociology identify subjective risk variables. This study investigates and compares the contribution of objective and subjective factors in explaining farmers' drought risk perception by means of survey data analysis. Data on risk perceptions, farm characteristics, and various other personality traits were collected from farmers located in the southwest Netherlands. From comparing the explanatory power of objective and subjective risk factors in separate models and a full model of risk perception, it can be concluded that farmers' risk perceptions are shaped by both rational and emotional factors. In a full risk perception model, being located in an area with external water supply, owning fields with salinization issues, cultivating drought-/salt-sensitive crops, farm revenue, drought risk experience, and perceived control are significant explanatory variables of farmers' drought risk perceptions. © 2014 Society for Risk Analysis.

The combined effects of a long-term experimental drought and an extreme drought on the use of plant-water sources in a Mediterranean forest.

PubMed

Barbeta, Adrià; Mejía-Chang, Monica; Ogaya, Romà; Voltas, Jordi; Dawson, Todd E; Peñuelas, Josep

2015-03-01

Vegetation in water-limited ecosystems relies strongly on access to deep water reserves to withstand dry periods. Most of these ecosystems have shallow soils over deep groundwater reserves. Understanding the functioning and functional plasticity of species-specific root systems and the patterns of or differences in the use of water sources under more frequent or intense droughts is therefore necessary to properly predict the responses of seasonally dry ecosystems to future climate. We used stable isotopes to investigate the seasonal patterns of water uptake by a sclerophyll forest on sloped terrain with shallow soils. We assessed the effect of a long-term experimental drought (12 years) and the added impact of an extreme natural drought that produced widespread tree mortality and crown defoliation. The dominant species, Quercus ilex, Arbutus unedo and Phillyrea latifolia, all have dimorphic root systems enabling them to access different water sources in space and time. The plants extracted water mainly from the soil in the cold and wet seasons but increased their use of groundwater during the summer drought. Interestingly, the plants subjected to the long-term experimental drought shifted water uptake toward deeper (10-35 cm) soil layers during the wet season and reduced groundwater uptake in summer, indicating plasticity in the functional distribution of fine roots that dampened the effect of our experimental drought over the long term. An extreme drought in 2011, however, further reduced the contribution of deep soil layers and groundwater to transpiration, which resulted in greater crown defoliation in the drought-affected plants. This study suggests that extreme droughts aggravate moderate but persistent drier conditions (simulated by our manipulation) and may lead to the depletion of water from groundwater reservoirs and weathered bedrock, threatening the preservation of these Mediterranean ecosystems in their current structures and compositions. © 2014

Early growth interactions between a mangrove and an herbaceous salt marsh species are not affected by elevated CO2 or drought

USGS Publications Warehouse

Howard, Rebecca J.; Stagg, Camille L.; Utomo, Herry S.

2018-01-01

Increasing atmospheric carbon dioxide (CO2) concentrations are likely to influence future distributions of plants and plant community structure in many regions of the world through effects on photosynthetic rates. In recent decades the encroachment of woody mangrove species into herbaceous marshes has been documented along the U.S. northern Gulf of Mexico coast. These species shifts have been attributed primarily to rising sea levels and warming winter temperatures, but the role of elevated CO2 and water availability may become more prominent drivers of species interactions under future climate conditions. Drought has been implicated as a major factor contributing to salt marsh vegetation dieback in this region. In this greenhouse study we examined the effects of CO2 concentration (∼380 ppm, ∼700 ppm) and water regime (drought, saturated, flooded) on early growth of Avicennia germinans, a C3 mangrove species, and Spartina alterniflora, a C4 grass. Plants were grown in monocultures and in a mixed-species assemblage. We found that neither species responded to elevated CO2 over the 10-month duration of the experiment, and there were few interactions between experimental factors. Two effects of water regime were documented: lower A. germinanspneumatophore biomass under drought conditions, and lower belowground biomass under flooded conditions regardless of planting assemblage. Evidence of interspecific interactions was noted. Competition for aboveground resources (e.g., light) was indicated by lower S. alterniflora stem biomass in mixed-species assemblage compared to biomass in S. alterniflora monocultures. Pneumatophore biomass of A. germinans was reduced when grown in monoculture compared to the mixed-species assemblage, indicating competition for belowground resources. These interactions provide insight into how these species may respond following major disturbance events that lead to vegetation dieback. Site variation in propagule availability

Identification and sequencing of members of a drought-induced multigene family in Atriplex canescens (salt bush)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jing Chen; Cairney, J.; Newton, R.J.

1991-05-01

Atriplex canescens (Pursh.) Nutt. is known to have a high degree of morphological and physiological drought-tolerance, which appears to be related to molecular responses. A cDNA library, constructed from drought-induced messenger RNA, was differentially screened with radioactively labelled cDNA probes synthesized from mRNA extracted from stressed and non-stressed Atriplex. Two clones named 19-3 and 27-3, whose expression is induced by drought-stress, have been characterized. Sequence analysis shows that they are more than 96% homologous. Each clone has an open reading frame which specifies a protein of 95 amino acids (12.77 kDa and 12.74 kDa respectively.) In vitro transcription and translationmore » of each clone results in a single protein of apparent molecular weight 8.6 kDa. The disparity in size may be due to secondary structure, dictated, at least in part, by a highly charged carboxy terminus which may be important for the function of these proteins in drought tolerance.« less

A probabilistic assessment of the likelihood of vegetation drought under varying climate conditions across China.

PubMed

Liu, Zhiyong; Li, Chao; Zhou, Ping; Chen, Xiuzhi

2016-10-07

Climate change significantly impacts the vegetation growth and terrestrial ecosystems. Using satellite remote sensing observations, here we focus on investigating vegetation dynamics and the likelihood of vegetation-related drought under varying climate conditions across China. We first compare temporal trends of Normalized Difference Vegetation Index (NDVI) and climatic variables over China. We find that in fact there is no significant change in vegetation over the cold regions where warming is significant. Then, we propose a joint probability model to estimate the likelihood of vegetation-related drought conditioned on different precipitation/temperature scenarios in growing season across China. To the best of our knowledge, this study is the first to examine the vegetation-related drought risk over China from a perspective based on joint probability. Our results demonstrate risk patterns of vegetation-related drought under both low and high precipitation/temperature conditions. We further identify the variations in vegetation-related drought risk under different climate conditions and the sensitivity of drought risk to climate variability. These findings provide insights for decision makers to evaluate drought risk and vegetation-related develop drought mitigation strategies over China in a warming world. The proposed methodology also has a great potential to be applied for vegetation-related drought risk assessment in other regions worldwide.

A probabilistic assessment of the likelihood of vegetation drought under varying climate conditions across China

PubMed Central

Liu, Zhiyong; Li, Chao; Zhou, Ping; Chen, Xiuzhi

2016-01-01

Climate change significantly impacts the vegetation growth and terrestrial ecosystems. Using satellite remote sensing observations, here we focus on investigating vegetation dynamics and the likelihood of vegetation-related drought under varying climate conditions across China. We first compare temporal trends of Normalized Difference Vegetation Index (NDVI) and climatic variables over China. We find that in fact there is no significant change in vegetation over the cold regions where warming is significant. Then, we propose a joint probability model to estimate the likelihood of vegetation-related drought conditioned on different precipitation/temperature scenarios in growing season across China. To the best of our knowledge, this study is the first to examine the vegetation-related drought risk over China from a perspective based on joint probability. Our results demonstrate risk patterns of vegetation-related drought under both low and high precipitation/temperature conditions. We further identify the variations in vegetation-related drought risk under different climate conditions and the sensitivity of drought risk to climate variability. These findings provide insights for decision makers to evaluate drought risk and vegetation-related develop drought mitigation strategies over China in a warming world. The proposed methodology also has a great potential to be applied for vegetation-related drought risk assessment in other regions worldwide. PMID:27713530

Drought vulnerability assessment for prioritising drought warning implementation

NASA Astrophysics Data System (ADS)

Naumann, Gustavo; Faneca Sànchez, Marta; Mwangi, Emmah; Barbosa, Paulo; Iglesias, Ana; Garrote, Luis; Werner, Micha

2014-05-01

Drought warning provides a potentially efficient approach to mitigation of drought impacts, and should be targeted at areas most vulnerable to being adversely impacted. Assessing drought vulnerability is, however, complex and needs to consider susceptibility to drought impact as well as the capacity to cope with drought. In this paper a Drought Vulnerability Index (DVI) is proposed that considers four primary components that reflect the capacity of society to adapt to drought; the renewable natural capital, the economic capacity, the human and civic resources, and the available infrastructure and technology. The DVI is established as a weighted combination of these four components, each a composite of selected indicators. Constituent indicators are calculated based on national and/or regional census data and statistics, and while the resulting DVI should not be considered an absolute measure of drought vulnerability it does provide for a prioritisation of areas that can be used to target drought warning efforts. Sensitivity analysis of weights applied show the established DVI to be robust. Through the DVI the development of drought forecasting and warning can be targeted at the most vulnerable areas. The proposed DVI is applied at both the continental scale in Africa to assess drought vulnerability of the different nations across Africa, and at the national level in Kenya, allowing for prioritisation of the counties within Kenya to drought vulnerability. Results show the relative vulnerability of countries and counties vulnerable to drought. At the continental scale, Somalia, Burundi, Niger, Ethiopia, Mali and Chad are found to be the countries most vulnerable to drought. At the national level, the relative vulnerability of the counties across Kenya is found, with counties in the North-East of Kenya having the highest values of DVI. At the country level results were compared with drought disaster information from the EM-DAT disaster database, showing a good

System robustness analysis for drought risk management in South Florida

NASA Astrophysics Data System (ADS)

Eilander, D.; Bouwer, L.; Barnes, J.; Mens, M.; Obeysekera, J.

2015-12-01

Drought is a frequently returning natural hazard in Florida, with at least one severe drought to be expected every decade. These droughts have had many impacts such as loss of agricultural products, inadequate public water supply and salt water intrusion into freshwater aquifers. Furthermore, climate change projections for South Florida suggest that dry spells are likely to be more frequent and prolonged, with negative impacts on water supply management for all users. In this study a System Robustness Analysis was conducted in order to analyse the effectiveness of strategies to limit the socio-economic impact of droughts under climate change. System Robustness Analysis (SRA) aims to support decision making by quantifying how well a system, with and without additional measures, can remain functioning under a range of external disturbances. Two system characteristics add up to system robustness: Resistance is the ability to withstand disturbances without responding (zero impact), and resilience is the ability to recover from the response to a disturbance. SRA can help to provide insight into the sensitivity of a system to changing magnitudes of extreme weather events. A regional-scale hydrologic and water management model is used to simulate the effect of changing precipitation and evaporation forcing on agricultural and urban water supply and demand in South Florida. The complex water management operational rules including water use restrictions are simulated in the model. Based on model runs with a various climate scenarios, drought events with a wide range of severity are identified and for each event the socio-economic impacts are determined. Here, a drought is defined as a reduced streamflow in the upstream Kissimmee basin, which contributes most to Lake Okeechobee, the major surface water storage in the system. The drought severity is characterized by the maximum drought deficit volume. Drought impacts are analyzed for several users in Miami Dade County. From

Moisture variations in brine-salted pasta filata cheese.

PubMed

Kindstedt, P S

2001-01-01

A study was made of the moisture distribution in brine-salted pasta filata cheese. Brine-salted cheeses usually develop reasonably smooth and predictable gradients of decreasing moisture from center to surface, resulting from outward diffusion of moisture in response to inward diffusion of salt. However, patterns of moisture variation within brine-salted pasta filata cheeses, notably pizza cheese, are more variable and less predictable because of the peculiar conditions that occur when warm cheese is immersed in cold brine. In this study, cold brining resulted in less moisture loss from the cheese surface to the brine. Also it created substantial temperature gradients within the cheese, which persisted after brining and influenced the movement of moisture within the cheese independently of that caused by the inward diffusion of salt. Depending on brining conditions and age, pizza cheese may contain decreasing, increasing, or irregular gradients of moisture from center to surface, which may vary considerably at different locations within a single block. This complicates efforts to obtain representative samples for moisture and composition testing. Dicing the entire block into small (e.g., 1.5 cm) cubes and collecting a composite sample after thorough mixing may serve as a practical sampling approach for manufacturers and users of pizza cheese that have ready access to dicing equipment.

Estimating drought risk across Europe from reported drought impacts, drought indices, and vulnerability factors

NASA Astrophysics Data System (ADS)

Blauhut, Veit; Stahl, Kerstin; Stagge, James Howard; Tallaksen, Lena M.; De Stefano, Lucia; Vogt, Jürgen

2016-07-01

Drought is one of the most costly natural hazards in Europe. Due to its complexity, drought risk, meant as the combination of the natural hazard and societal vulnerability, is difficult to define and challenging to detect and predict, as the impacts of drought are very diverse, covering the breadth of socioeconomic and environmental systems. Pan-European maps of drought risk could inform the elaboration of guidelines and policies to address its documented severity and impact across borders. This work tests the capability of commonly applied drought indices and vulnerability factors to predict annual drought impact occurrence for different sectors and macro regions in Europe and combines information on past drought impacts, drought indices, and vulnerability factors into estimates of drought risk at the pan-European scale. This hybrid approach bridges the gap between traditional vulnerability assessment and probabilistic impact prediction in a statistical modelling framework. Multivariable logistic regression was applied to predict the likelihood of impact occurrence on an annual basis for particular impact categories and European macro regions. The results indicate sector- and macro-region-specific sensitivities of drought indices, with the Standardized Precipitation Evapotranspiration Index (SPEI) for a 12-month accumulation period as the overall best hazard predictor. Vulnerability factors have only limited ability to predict drought impacts as single predictors, with information about land use and water resources being the best vulnerability-based predictors. The application of the hybrid approach revealed strong regional and sector-specific differences in drought risk across Europe. The majority of the best predictor combinations rely on a combination of SPEI for shorter and longer accumulation periods, and a combination of information on land use and water resources. The added value of integrating regional vulnerability information with drought risk prediction

Iris reconstruction using autologous iris preserved in cold balanced salt solution for 8 hours in iatrogenic total iridodialysis during cataract surgery: a case report.

PubMed

Bang, Seung Pil; Jun, Jong Hwa

2017-04-04

A large iris defect or extensive iridodialysis can be an intractable cause of visual disturbance, photophobia, glare, monocular diplopia, or cosmetic deformity. The implantation of an artificial iris substitute could be an effective option, but this can cause a reduction in endothelial cell density. We succeeded in the anatomical restoration of iris tissue that was totally dialyzed out of the eye, and was preserved in cold balanced salt solution for 8 h. Engrafted iris tissue was maintained within the aqueous humor. A 71-year-old man was referred to our clinic for management of an iatrogenic total iridodialysis. The totally dialyzed iris tissue was immediately preserved in sterile cold balanced salt solution and packed in a sterile biopsy bottle that was surrounded with ice cubes. Under general anesthesia, a pars plana vitrectomy was performed to remove the remaining lens cortex and vitreous fiber anterior to the equator. A sulcus-positioned intraocular lens (IOL) was repositioned and fixed by ab externo scleral sutures. Preserved iris tissue was inserted and ironed using both iris spatula and ocular viscoelastic devices. Five-point ab interno scleral sutures were made 1.0 mm posterior to the limbus. The engrafted iris was successfully maintained for 6 months and did not undergo any atrophic change or depigmentation, which may be caused by primary implantation failure due to a blocked blood supply.

Investigation of wintertime cold-air pools and aerosol layers in the Salt Lake Valley using a lidar ceilometer

NASA Astrophysics Data System (ADS)

Young, Joseph Swyler

This thesis investigates the utility of lidar ceilometers, a type of aerosol lidar, in improving the understanding of meteorology and air quality in persistent wintertime stable boundary layers, or cold-air pools, that form in urbanized valley and basin topography. This thesis reviews the scientific literature to survey the present knowledge of persistent cold-air pools, the operating principles of lidar ceilometers, and their demonstrated utility in meteorological investigations. Lidar ceilometer data from the Persistent Cold-Air Pool Study (PCAPS) are then used with meteorological and air quality data from other in situ and remote sensing equipment to investigate cold-air pools that formed in Utah's Salt Lake Valley during the winter of 2010-2011. The lidar ceilometer is shown to accurately measure aerosol layer depth and aerosol loading, when compared to visual observations. A linear relationship is found between low-level lidar backscatter and surface particulate measurements. Convective boundary layer lidar analysis techniques applied to cold-air pool ceilometer profiles can detect useful layer characteristics. Fine-scale waves are observed and analyzed within the aerosol layer, with emphasis on Kelvin-Helmholz waves. Ceilometer aerosol backscatter profiles are analyzed to quantify and describe mixing processes in persistent cold-air pools. Overlays of other remote and in-situ observations are combined with ceilometer particle backscatter to describe specific events during PCAPS. This analysis describes the relationship between the aerosol layer and the valley inversion as well as interactions with large-scale meteorology. The ceilometer observations of hydrometers are used to quantify cloudiness and precipitation during the project, observing that 50% of hours when a PCAP was present had clouds or precipitation below 5 km above ground level (AGL). Then, combining an objective technique for determining hourly aerosol layer depths and correcting this

The relative influence of climate and catchment properties on hydrological drought

NASA Astrophysics Data System (ADS)

Van Loon, Anne; Laaha, Gregor; Koffler, Daniel

2014-05-01

Studying hydrological drought (a below-normal water availability in groundwater, lakes and streams) is important to society and the ecosystem, but can also reveal interesting information about catchment functioning. This information can later be used for predicting drought in ungauged basins and to inform water management decisions. In this study, we used an extensive Austrian dataset of discharge measurements in clusters of catchments and combine this dataset with thematic information on climate and catchment properties. Our aim was to study the relative effects of climate and catchment characteristics on drought duration and deficit and on hydrological drought typology. Because the climate of the region is roughly uniform, our hypothesis was that the effect of differences of catchment properties would stand out. From time series of precipitation and discharge we identified droughts with the widely-used threshold level approach, defining a drought when a variable falls below a pre-defined threshold representing the regime. Drought characteristics that were analysed are drought duration and deficit. We also applied the typology of Van Loon & Van Lanen (2012). To explain differences in drought characteristics between catchments we did a correlation analysis with climate and catchment characteristics, based on Pearson correlation. We found very interesting patterns in the correlations of drought characteristics with climate and catchment properties: 1) Droughts with long duration (mean and maximum) and composite droughts are related to catchments with a high BFI (high baseflow) and a high percentage of shallow groundwater tables. 2) The deficit (mean and maximum) of both meteorological droughts and hydrological droughts is strongly related to catchment humidity, in this case quantified by average annual precipitation. 3) The hydrological drought types that are related to snow, i.e. cold snow season drought and snow melt drought, occur in catchments that are have a

Drought: A comprehensive R package for drought monitoring, prediction and analysis

NASA Astrophysics Data System (ADS)

Hao, Zengchao; Hao, Fanghua; Singh, Vijay P.; Cheng, Hongguang

2015-04-01

Drought may impose serious challenges to human societies and ecosystems. Due to complicated causing effects and wide impacts, a universally accepted definition of drought does not exist. The drought indicator is commonly used to characterize drought properties such as duration or severity. Various drought indicators have been developed in the past few decades for the monitoring of a certain aspect of drought condition along with the development of multivariate drought indices for drought characterizations from multiple sources or hydro-climatic variables. Reliable drought prediction with suitable drought indicators is critical to the drought preparedness plan to reduce potential drought impacts. In addition, drought analysis to quantify the risk of drought properties would provide useful information for operation drought managements. The drought monitoring, prediction and risk analysis are important components in drought modeling and assessments. In this study, a comprehensive R package "drought" is developed to aid the drought monitoring, prediction and risk analysis (available from R-Forge and CRAN soon). The computation of a suite of univariate and multivariate drought indices that integrate drought information from various sources such as precipitation, temperature, soil moisture, and runoff is available in the drought monitoring component in the package. The drought prediction/forecasting component consists of statistical drought predictions to enhance the drought early warning for decision makings. Analysis of drought properties such as duration and severity is also provided in this package for drought risk assessments. Based on this package, a drought monitoring and prediction/forecasting system is under development as a decision supporting tool. The package will be provided freely to the public to aid the drought modeling and assessment for researchers and practitioners.

Subsurface Salts in Antarctic Dry Valley Soils

NASA Technical Reports Server (NTRS)

Englert, P.; Bishop, J. L.; Gibson, E. K.; Koeberl, C.

2013-01-01

The distribution of water-soluble ions, major and minor elements, and other parameters were examined to determine the extent and effects of chemical weathering on cold desert soils. Patterns at the study sites support theories of multiple salt forming processes, including marine aerosols and chemical weathering of mafic minerals. Periodic solar-mediated ionization of atmospheric nitrogen might also produce high nitrate concentrations found in older sediments. Chemical weathering, however, was the major contributor of salts in Antarctic Dry Valleys. The Antarctic Dry Valleys represent a unique analog for Mars, as they are extremely cold and dry desert environments. Similarities in the climate, surface geology, and chemical properties of the Dry Valleys to that of Mars imply the possible presence of these soil formation mechanisms on Mars, other planets and icy satellites.

BrRZFP1 a Brassica rapa C3HC4-type RING zinc finger protein involved in cold, salt and dehydration stress.

PubMed

Jung, Y J; Lee, I H; Nou, I S; Lee, K D; Rashotte, A M; Kang, K K

2013-03-01

C3HC4-type RING zinc finger proteins are known to be essential in the regulation of plant processes, including responses to abiotic stress. Here, we identify, clone and examine the first C3HC4-type RING zinc finger protein (BrRZFP1) from Brassica rapa under stress conditions. Phylogenetic analysis of BrRZFP1 revealed strong sequence similarity to C3HC4-type zinc finger proteins from Arabidopsis that are induced by abiotic stresses. Diverse environmental stresses, including salt and cold, were found to induce BrRZFP1 transcripts greater than eightfold in B. rapa. Additional strong induction was shown of the stress hormone abscisic acid, together suggesting that BrRZFP1 could play a role as a general stress modulator. Similar profiles of induction for each of these stresses was found in both root and shoot tissues, although at much higher levels in roots. Constitutive expression of BrRZFP1 in Nicotiana tabacum was conducted to further analyse how changes in gene expression levels would affect plant stress responses. BrRZFP1 overexpression conferred increased tolerance to cold, salt and dehydration stresses. This was observed in several assays examining growth status throughout development, including increased germination, fresh weight and length of shoots and roots, as well as enhanced chlorophyll retention. These results suggest that the transcription factor BrRZFP1 is an important determinant of stress response in plants and that changes in its expression level in plants could increase stress tolerance. © 2012 German Botanical Society and The Royal Botanical Society of the Netherlands.

Revisiting the leading drivers of Pacific coastal drought variability in the Contiguous United States

NASA Astrophysics Data System (ADS)

Cook, B.; Williams, P.; Mankin, J. S.; Seager, R.; Smerdon, J. E.; Singh, D.

2017-12-01

Coastal droughts simultaneously affecting California, Oregon, and Washington are rare, but have extensive and severe impacts (e.g., wildfire, agriculture). To better understand these events, we use historical observations to investigate: (1) drought variability along the Pacific Coast of the Contiguous United States and (2) years when extreme drought affects the entire coast. The leading pattern of cold-season (October-March) precipitation variability along the Pacific Coast favors spatially coherent moisture anomalies, accounts for >40% of the underlying variance, and is forced primarily by internal atmospheric dynamics. This contrasts with a much weaker dipole mode ( 20% of precipitation variability) characterized by anti-phased moisture anomalies across 40N and strong correlations with tropical Pacific sea surface temperatures (SSTs). Sixteen coastal-wide summer droughts occurred from 1895-2016 (clustering in the 1920s-1930s and post-2000), events most strongly linked with the leading precipitation mode and internal atmospheric variability. The frequency of landfalling atmospheric rivers south of 40N is sharply reduced during coastal droughts, but not north of this boundary where their frequency is more strongly influenced by the dipole. The lack of a consistent pattern of SST forcing during coastal droughts suggests little potential for skillful predictions of these events at the seasonal scale. However, their tendency to cluster in time and the impact of warming during recent droughts may help inform decadal and longer-term drought risks.

Physiological and Proteomic Adaptation of the Alpine Grass Stipa purpurea to a Drought Gradient

PubMed Central

Yang, Yunqiang; Dong, Chao; Yang, Shihai; Li, Xiong; Sun, Xudong; Yang, Yongping

2015-01-01

Stipa purpurea, an endemic forage species on the Tibetan Plateau, is highly resistant to cold and drought, but the mechanisms underlying its responses to drought stress remain elusive. An understanding of such mechanisms may be useful for developing cultivars that are adaptable to water deficit. In this study, we analyzed the physiological and proteomic responses of S. purpurea under increasing drought stress. Seedlings of S. purpurea were subjected to a drought gradient in a controlled experiment, and proteins showing changes in abundance under these conditions were identified by two-dimensional electrophoresis followed by mass spectrometry analysis. A western blotting analysis was conducted to confirm the increased abundance of a heat-shock protein, NCED2, and a dehydrin in S. purpurea seedlings under drought conditions. We detected carbonylated proteins to identify oxidation-sensitive proteins in S. purpurea seedlings, and found that ribulose-1, 5-bisphosphate carboxylase oxygenase (RuBisCO) was one of the oxidation-sensitive proteins under drought. Together, these results indicated drought stress might inhibit photosynthesis in S. purpurea by oxidizing RuBisCO, but the plants were able to maintain photosynthetic efficiency by a compensatory upregulation of unoxidized RuBisCO and other photosynthesis-related proteins. Further analyses confirmed that increased abundance of antioxidant enzymes could balance the redox status of the plants to mitigate drought-induced oxidative damage. PMID:25646623

Genome-Wide Association Study Identifies Loci for Salt Tolerance during Germination in Autotetraploid Alfalfa (Medicago sativa L.) Using Genotyping-by-Sequencing

PubMed Central

Yu, Long-Xi; Liu, Xinchun; Boge, William; Liu, Xiang-Ping

2016-01-01

Salinity is one of major abiotic stresses limiting alfalfa (Medicago sativa L.) production in the arid and semi-arid regions in US and other counties. In this study, we used a diverse panel of alfalfa accessions previously described by Zhang et al. (2015) to identify molecular markers associated with salt tolerance during germination using genome-wide association study (GWAS) and genotyping-by-sequencing (GBS). Phenotyping was done by germinating alfalfa seeds under different levels of salt stress. Phenotypic data of adjusted germination rates and SNP markers generated by GBS were used for marker-trait association. Thirty six markers were significantly associated with salt tolerance in at least one level of salt treatments. Alignment of sequence tags to the Medicago truncatula genome revealed genetic locations of the markers on all chromosomes except chromosome 3. Most significant markers were found on chromosomes 1, 2, and 4. BLAST search using the flanking sequences of significant markers identified 14 putative candidate genes linked to 23 significant markers. Most of them were repeatedly identified in two or three salt treatments. Several loci identified in the present study had similar genetic locations to the reported QTL associated with salt tolerance in M. truncatula. A locus identified on chromosome 6 by this study overlapped with that by drought in our previous study. To our knowledge, this is the first report on mapping loci associated with salt tolerance during germination in autotetraploid alfalfa. Further investigation on these loci and their linked genes would provide insight into understanding molecular mechanisms by which salt and drought stresses affect alfalfa growth. Functional markers closely linked to the resistance loci would be useful for MAS to improve alfalfa cultivars with enhanced resistance to drought and salt stresses. PMID:27446182

Genome-Wide Association Study Identifies Loci for Salt Tolerance during Germination in Autotetraploid Alfalfa (Medicago sativa L.) Using Genotyping-by-Sequencing.

PubMed

Yu, Long-Xi; Liu, Xinchun; Boge, William; Liu, Xiang-Ping

2016-01-01

Salinity is one of major abiotic stresses limiting alfalfa (Medicago sativa L.) production in the arid and semi-arid regions in US and other counties. In this study, we used a diverse panel of alfalfa accessions previously described by Zhang et al. (2015) to identify molecular markers associated with salt tolerance during germination using genome-wide association study (GWAS) and genotyping-by-sequencing (GBS). Phenotyping was done by germinating alfalfa seeds under different levels of salt stress. Phenotypic data of adjusted germination rates and SNP markers generated by GBS were used for marker-trait association. Thirty six markers were significantly associated with salt tolerance in at least one level of salt treatments. Alignment of sequence tags to the Medicago truncatula genome revealed genetic locations of the markers on all chromosomes except chromosome 3. Most significant markers were found on chromosomes 1, 2, and 4. BLAST search using the flanking sequences of significant markers identified 14 putative candidate genes linked to 23 significant markers. Most of them were repeatedly identified in two or three salt treatments. Several loci identified in the present study had similar genetic locations to the reported QTL associated with salt tolerance in M. truncatula. A locus identified on chromosome 6 by this study overlapped with that by drought in our previous study. To our knowledge, this is the first report on mapping loci associated with salt tolerance during germination in autotetraploid alfalfa. Further investigation on these loci and their linked genes would provide insight into understanding molecular mechanisms by which salt and drought stresses affect alfalfa growth. Functional markers closely linked to the resistance loci would be useful for MAS to improve alfalfa cultivars with enhanced resistance to drought and salt stresses.

Genetic Modification in Dedicated Bioenergy Crops and Strategies for Gene Confinement

USDA-ARS?s Scientific Manuscript database

Genetic modification of dedicated bioenergy crops is in its infancy; however, there are numerous advantages to the use of these tools to improve crops used for biofuels. Potential improved traits through genetic engineering (GE) include herbicide resistance, pest, drought, cold and salt tolerance, l...

Injection-salting and cold-smoking of farmed atlantic cod (Gadus morhua L.) and Atlantic salmon (Salmo salar L.) at different stages of Rigor Mortis: effect on physical properties.

PubMed

Akse, L; Birkeland, S; Tobiassen, T; Joensen, S; Larsen, R

2008-10-01

Processing of fish is generally conducted postrigor, but prerigor processing is associated with some potential advantages. The aim of this study was to study how 5 processing regimes of cold-smoked cod and salmon conducted at different stages of rigor influenced yield, fillet shrinkage, and gaping. Farmed cod and salmon was filleted, salted by brine injection of 25% NaCl, and smoked for 2 h at different stages of rigor. Filleting and salting prerigor resulted in increased fillet shrinkage and less increase in weight during brine injection, which in turn was correlated to the salt content of the fillet. These effects were more pronounced in cod fillets when compared to salmon. Early processing reduced fillet gaping and fillets were evaluated as having a firmer texture. In a follow-up trial with cod, shrinkage and weight gain during injection was studied as an effect of processing time postmortem. No changes in weight gain were observed for fillets salted the first 24 h postmortem; however, by delaying the processing 12 h postmortem, the high and rapid shrinking of cod fillets during brine injection was halved.

Breeding and Domesticating Crops Adapted to Drought and Salinity: A New Paradigm for Increasing Food Production

PubMed Central

Fita, Ana; Rodríguez-Burruezo, Adrián; Boscaiu, Monica; Prohens, Jaime; Vicente, Oscar

2015-01-01

World population is expected to reach 9.2 × 109 people by 2050. Feeding them will require a boost in crop productivity using innovative approaches. Current agricultural production is very dependent on large amounts of inputs and water availability is a major limiting factor. In addition, the loss of genetic diversity and the threat of climate change make a change of paradigm in plant breeding and agricultural practices necessary. Average yields in all major crops are only a small fraction of record yields, and drought and soil salinity are the main factors responsible for yield reduction. Therefore there is the need to enhance crop productivity by improving crop adaptation. Here we review the present situation and propose the development of crops tolerant to drought and salt stress for addressing the challenge of dramatically increasing food production in the near future. The success in the development of crops adapted to drought and salt depends on the efficient and combined use of genetic engineering and traditional breeding tools. Moreover, we propose the domestication of new halophilic crops to create a ‘saline agriculture’ which will not compete in terms of resources with conventional agriculture. PMID:26617620

A consortium of rhizobacterial strains and biochemical growth elicitors improve cold and drought stress tolerance in rice (Oryza sativa L.).

PubMed

Kakar, K U; Ren, X-L; Nawaz, Z; Cui, Z-Q; Li, B; Xie, G-L; Hassan, M A; Ali, E; Sun, G-C

2016-05-01

In the present study, a consortium of two rhizobacteria Bacillus amyloliquefaciens Bk7 and Brevibacillus laterosporus B4, termed 'BB', biochemical elicitors salicylic acid and β-aminobutyric acid (SB) and their mixture (BBSB) were investigated for cold and drought stress tolerance in rice plants. After withholding water for 16 days, rice plants treated with BBSB showed 100% survival, improved seedling height (35.4 cm), shoot number (6.12), and showed minimum symptoms of chlorosis (19%), wilting (4%), necrosis (6%) and rolling of leaves. Similarly, BB inoculation enhanced plant growth and reduced overall symptoms in rice seedlings subjected to 0 ± 5 °C for 24 h. Our results imply several mechanisms underlying BB- and BBSB-elicited stress tolerance. In contrast to the control, both treatments significantly decreased leaf monodehydroascorbate (MDA) content and electrolyte leakage, and increased leaf proline and cholorophyll content. Moreover, activities of antioxidant enzymes, superoxide dismutase (SOD) and catalase (CAT) increased 3.0- and 3.6-fold, respectively. Moreover, expression of OsMYB3R-2, OsDIL, OsDREB1A and OsCDPK13 genes was significantly up-regulated, suggesting that these genes play important roles in abiotic stress tolerance of rice. In addition, bacterial strains Bk7 and B4 were able to produce high amounts of IAA and siderophores, and colonise the plant roots, while only strain Bk7 exhibited the capability to form biofilms and solubilise inorganic phosphate. This study indicates that the BB and BBSB bio-formulations can be used to confer induced systematic tolerance and improve the health of rice plants subject to chilling and drought stress. © 2016 German Botanical Society and The Royal Botanical Society of the Netherlands.

Past and future hydro-climatic change and the 2015 drought in the interior of western Canada

NASA Astrophysics Data System (ADS)

DeBeer, C. M.; Wheater, H. S.; Pomeroy, J. W.; Stewart, R. E.; Szeto, K.; Brimelow, J.; Chun, K. P.; Masud, M. B.; Bonsal, B. R.

2015-12-01

The interior of western Canada has experienced rapid and severe hydro-climatic change in recent decades. This is projected to continue in future. Since 1950, mean annual air temperature has increased by 2 °C (4 °C increase in winter daily means) with associated changes in cryospheric regime. Changes in precipitation have varied regionally; in the Prairies there has been a decrease in winter precipitation, shift from snowfall to rainfall, and increased clustering of summer rainfall events into multiple day storms. Regionally, river discharge indicates an earlier spring freshet and increased incidence of rain-on-snow peak flow events, but otherwise mixed responses due to multiple process interactions. In winter/spring 2015, persistent anomalous ridging conditions developed over western North America causing widespread drought. This produced abnormally warm and dry conditions over the Rocky Mountain headwaters of the Mackenzie and Saskatchewan Rivers, resulting in low spring snowpacks that melted earlier than normal and were followed by an atypical lack of spring rainfall. By summer 2015, most of western Canada was subject to extreme drought conditions leading to record dry soil moisture conditions in parts of the Prairies during a key crop growth time, streamflows that were greatly diminished, and extensive wildfires across the Boreal Forest. The importance of the warmer winter to this drought and the contextual trend for increasing winter warmth provide new insight into the impact of climate warming on droughts in cold regions. This talk will discuss efforts by the Changing Cold Regions Network (CCRN; www.ccrnetwork.ca) to understand and diagnose the 2015 drought, its potential linkages with the concurrent California drought and other continental events, and its relevance in the context of historical and predicted future climate change.

Poaceae vs. Abiotic Stress: Focus on Drought and Salt Stress, Recent Insights and Perspectives

PubMed Central

Landi, Simone; Hausman, Jean-Francois; Guerriero, Gea; Esposito, Sergio

2017-01-01

Poaceae represent the most important group of crops susceptible to abiotic stress. This large family of monocotyledonous plants, commonly known as grasses, counts several important cultivated species, namely wheat (Triticum aestivum), rice (Oryza sativa), maize (Zea mays), and barley (Hordeum vulgare). These crops, notably, show different behaviors under abiotic stress conditions: wheat and rice are considered sensitive, showing serious yield reduction upon water scarcity and soil salinity, while barley presents a natural drought and salt tolerance. During the green revolution (1940–1960), cereal breeding was very successful in developing high-yield crops varieties; however, these cultivars were maximized for highest yield under optimal conditions, and did not present suitable traits for tolerance under unfavorable conditions. The improvement of crop abiotic stress tolerance requires a deep knowledge of the phenomena underlying tolerance, to devise novel approaches and decipher the key components of agricultural production systems. Approaches to improve food production combining both enhanced water use efficiency (WUE) and acceptable yields are critical to create a sustainable agriculture in the future. This paper analyzes the latest results on abiotic stress tolerance in Poaceae. In particular, the focus will be directed toward various aspects of water deprivation and salinity response efficiency in Poaceae. Aspects related to cell wall metabolism will be covered, given the importance of the plant cell wall in sensing environmental constraints and in mediating a response; the role of silicon (Si), an important element for monocots' normal growth and development, will also be discussed, since it activates a broad-spectrum response to different exogenous stresses. Perspectives valorizing studies on landraces conclude the survey, as they help identify key traits for breeding purposes. PMID:28744298

Improvement of Arabidopsis Biomass and Cold, Drought and Salinity Stress Tolerance by Modified Circadian Clock-Associated PSEUDO-RESPONSE REGULATORs.

PubMed

Nakamichi, Norihito; Takao, Saori; Kudo, Toru; Kiba, Takatoshi; Wang, Yin; Kinoshita, Toshinori; Sakakibara, Hitoshi

2016-05-01

Plant circadian clocks control the timing of a variety of genetic, metabolic and physiological processes. Recent studies revealed a possible molecular mechanism for circadian clock regulation. Arabidopsis thaliana (Arabidopsis) PSEUDO-RESPONSE REGULATOR (PRR) genes, including TIMING OF CAB EXPRESSION 1 (TOC1), encode clock-associated transcriptional repressors that act redundantly. Disruption of multiple PRR genes results in drastic phenotypes, including increased biomass and abiotic stress tolerance, whereas PRR single mutants show subtle phenotypic differences due to genetic redundancy. In this study, we demonstrate that constitutive expression of engineered PRR5 (PRR5-VP), which functions as a transcriptional activator, can increase biomass and abiotic stress tolerance, similar to prr multiple mutants. Concomitant analyses of relative growth rate, flowering time and photosynthetic activity suggested that increased biomass of PRR5-VP plants is mostly due to late flowering, rather than to alterations in photosynthetic activity or growth rate. In addition, genome-wide gene expression profiling revealed that genes related to cold stress and water deprivation responses were up-regulated in PRR5-VP plants. PRR5-VP plants were more resistant to cold, drought and salinity stress than the wild type, whereas ft tsf and gi, well-known late flowering and increased biomass mutants, were not. These findings suggest that attenuation of PRR function by a single transformation of PRR-VP is a valuable method for increasing biomass as well as abiotic stress tolerance in Arabidopsis. Because the PRR gene family is conserved in vascular plants, PRR-VP may regulate biomass and stress responses in many plants, but especially in long-day annual plants. © The Author 2016. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Carbon and Water Fluxes of Crops Exposed to the Sequence of Naturally Occurring Heat Stress, Drought and Freezing

NASA Astrophysics Data System (ADS)

Joo, E.; Miller, J. N.; Bernacchi, C.

2015-12-01

As a consequence of global climate change the occurrence of extreme weather events (heat waves, cold spells, drought, etc) are predicted to become more frequent and/or intense, which will likely have a large impact on crop production. In the winter of 2013/2014 several polar vortexes were experienced in Illinois, US, resulting in periods of extreme low temperatures between -20°C and -35°C. Prior to the extreme cold winter of 2013/2014 the region experienced drought over a hot summer in 2012. Four established fields of three perennial biofuel crops (Miscanthus x giganteus, Panicum virgatum L., and a mixture of native prairie species) and Zea mays/Glycine max agroecosystem have been studied since 2009 in order to investigate the effect of climate change and land-use change on carbon and water fluxes using the eddy covariance technique, as well as biomass production of these species. The combined effect of the heat and drought stress in 2012 resulted in severe water deficit of all species (up to -360 mm for miscanthus), which resulted in reduced net ecosystem exchange (NEE) during the drought for all species other than miscanthus. In the following year, during the recovery of these species from drought, miscanthus showed decreased NEE but the other species did not appear to be negatively influenced. As a consequence of the environmental stresses (heat and drought stress followed by extreme freezing), the water and carbon exchanges (such as ET, NEE, GPP, Reco) as well as growth parameters (LAI, biomass production) are shown to vary based on the stress tolerance of these species.

Analysis of a long drought in Piedmont, Italy - Autumn 2001

NASA Astrophysics Data System (ADS)

Gandini, D.; Marchisio, C.; Paesano, G.; Pelosini, P.

2003-04-01

A long period of drought and cold temperatures has characterised the seasons of Autumn 2001 and Winter 2001-2002 on the regions of the southern Alpine chain. The analysis of precipitation's data, collected by the Regional Monitoring network of Piedmont Region (on the south-west side of Alps), shows that they are far below the mean values and very close to the historical minimum of the last century. The six months accumulated precipitation in Turin (Piedmont chief town), from June to December 2001, has reached the historical minimum value of 206 mm in comparison with a mean value of 540 mm. The drought has been remarkable also in the mountain areas with the lack of snowfalls and critical consequences for water reservoirs. At the same time, the number of days with daily averaged temperature below or close to 0°C in December 2001 has been the greatest value of the last 50 years, much higher than the 50 years average, for the whole Piedmont region. This study contains a detailed analysis of observed data to characterise the drought episode, associated with a climatological analysis of meteorological parameters in order to detect the typical large scale pattern of the drought periods and their persistency's features.

DFR1-Mediated Inhibition of Proline Degradation Pathway Regulates Drought and Freezing Tolerance in Arabidopsis.

PubMed

Ren, Yongbing; Miao, Min; Meng, Yun; Cao, Jiasheng; Fan, Tingting; Yue, Junyang; Xiao, Fangming; Liu, Yongsheng; Cao, Shuqing

2018-06-26

Proline accumulation is one of the most important adaptation mechanisms for plants to cope with environmental stresses, such as drought and freezing. However, the molecular mechanism of proline homeostasis under these stresses is largely unknown. Here, we identified a mitochondrial protein, DFR1, involved in the inhibition of proline degradation in Arabidopsis. DFR1 was strongly induced by drought and cold stresses. The dfr1 knockdown mutants showed hypersensitivity to drought and freezing stresses, whereas the DFR1 overexpression plants exhibited enhanced tolerance, which was positively correlated with proline levels. DFR1 interacts with proline degradation enzymes PDH1/2 and P5CDH and compromises their activities. Genetic analysis showed that DFR1 acts upstream of PDH1/2 and P5CDH to positively regulate proline accumulation. Our results demonstrate a regulatory mechanism by which, under drought and freezing stresses, DFR1 interacts with PDH1/2 and P5CDH to abrogate their activities to maintain proline homeostasis, thereby conferring drought and freezing tolerance. Copyright © 2018 The Author(s). Published by Elsevier Inc. All rights reserved.

[Italian cold cuts evolution. New opportunities for diet in athletes].

PubMed

Driussi, Caterina; Vriz, Olga; Mos, Lucio

2012-10-01

Italian cold cuts were not recommended for cardiac patients, healthy people, and athletes because of their high content in salt, fat, calories, and cholesterol. Recent studies from INRAN (National Institute of Research for Food and Nutrition) have provided new insights into Italian cold cuts, showing that they are more digestible, with less sodium, fat, cholesterol and calories, than previous products. Thanks to these new chemical-physical characteristics, Italian cold cuts can now be indicated for nutrition in the general population and athletes.

Proteomic analysis of drought resistance in crabapple seedlings primed by the xenobiotic Beta-aminobutyric acid

USDA-ARS?s Scientific Manuscript database

In a variety of annual crops and model plants, the xenobiotic DL-Beta-aminobutyric acid (BABA) has been shown to enhance disease resistance and increase salt, drought and thermotolerance. BABA does not activate stress genes directly, but sensitizes plants to respond more quickly and strongly to biot...

Temperature as a potent driver of regional forest drought stress and tree mortality

USGS Publications Warehouse

Williams, A. Park; Allen, Craig D.; Macalady, Alison K.; Griffin, Daniel; Woodhouse, Connie A.; Meko, David M.; Swetnam, Thomas W.; Rauscher, Sara A.; Seager, Richard; Grissino-Mayer, Henri D.; Dean, Jeffrey S.; Cook, Edward R.; Gangodagamage, Chandana; Cai, Michael; McDowell, Nathan G.

2012-01-01

s the climate changes, drought may reduce tree productivity and survival across many forest ecosystems; however, the relative influence of specific climate parameters on forest decline is poorly understood. We derive a forest drought-stress index (FDSI) for the southwestern United States using a comprehensive tree-ring data set representing AD 1000-2007. The FDSI is approximately equally influenced by the warm-season vapour-pressure deficit (largely controlled by temperature) and cold-season precipitation, together explaining 82% of the FDSI variability. Correspondence between the FDSI and measures of forest productivity, mortality, bark-beetle outbreak and wildfire validate the FDSI as a holistic forest-vigour indicator. If the vapour-pressure deficit continues increasing as projected by climate models, the mean forest drought-stress by the 2050s will exceed that of the most severe droughts in the past 1,000 years. Collectively, the results foreshadow twenty-first-century changes in forest structures and compositions, with transition of forests in the southwestern United States, and perhaps water-limited forests globally, towards distributions unfamiliar to modern civilization.

Assessment of MODIS-derived indices (2001-2013) to drought across Taiwan's forests

NASA Astrophysics Data System (ADS)

Chang, Chung-Te; Wang, Hsueh-Ching; Huang, Cho-ying

2018-05-01

Tropical and subtropical ecosystems, the largest terrestrial carbon pools, are very susceptible to the variability of seasonal precipitation. However, the assessment of drought conditions in these regions is often overlooked due to the preconceived notion of the presence of high humidity. Drought indices derived from remotely sensed imagery have been commonly used for large-scale monitoring, but feasibility of drought assessment may vary across regions due to climate regimes and local biophysical conditions. Therefore, this study aims to evaluate the feasibility of 11 commonly used MODIS-derived vegetation/drought index in the forest regions of Taiwan through comparison with the station-based standardized precipitation index with a 3-month time scale (SPI3). The drought indices were further transformed (standardized anomaly, SA) to make them better delineate the spatiotemporal variations of drought conditions. The results showed that the Normalized Difference Infrared Index utilizing the near-infrared and shortwave infrared bands (NDII6) may be more superior to other indices in delineating drought patterns. Overall, the NDII6 SA-SPI3 pair yielded the highest correlation (mean r ± standard deviation = 0.31 ± 0.13) and was most significant in central and south Taiwan ( r = 0.50-0.90) during the cold, dry season (January and April). This study illustrated that the NDII6 is suitable to delineate drought conditions in a relatively humid region. The results suggested the better performance of the NDII6 SA-SPI3 across the high climate gradient, especially in the regions with dramatic interannual amplifications of rainfall. This synthesis was conducted across a wide bioclimatic gradient, and the findings could be further generalized to a much broader geographical extent.

Assessment of MODIS-derived indices (2001-2013) to drought across Taiwan's forests

NASA Astrophysics Data System (ADS)

Chang, Chung-Te; Wang, Hsueh-Ching; Huang, Cho-ying

2017-12-01

Tropical and subtropical ecosystems, the largest terrestrial carbon pools, are very susceptible to the variability of seasonal precipitation. However, the assessment of drought conditions in these regions is often overlooked due to the preconceived notion of the presence of high humidity. Drought indices derived from remotely sensed imagery have been commonly used for large-scale monitoring, but feasibility of drought assessment may vary across regions due to climate regimes and local biophysical conditions. Therefore, this study aims to evaluate the feasibility of 11 commonly used MODIS-derived vegetation/drought index in the forest regions of Taiwan through comparison with the station-based standardized precipitation index with a 3-month time scale (SPI3). The drought indices were further transformed (standardized anomaly, SA) to make them better delineate the spatiotemporal variations of drought conditions. The results showed that the Normalized Difference Infrared Index utilizing the near-infrared and shortwave infrared bands (NDII6) may be more superior to other indices in delineating drought patterns. Overall, the NDII6 SA-SPI3 pair yielded the highest correlation (mean r ± standard deviation = 0.31 ± 0.13) and was most significant in central and south Taiwan (r = 0.50-0.90) during the cold, dry season (January and April). This study illustrated that the NDII6 is suitable to delineate drought conditions in a relatively humid region. The results suggested the better performance of the NDII6 SA-SPI3 across the high climate gradient, especially in the regions with dramatic interannual amplifications of rainfall. This synthesis was conducted across a wide bioclimatic gradient, and the findings could be further generalized to a much broader geographical extent.

Drought impact functions as intermediate step towards drought damage assessment

NASA Astrophysics Data System (ADS)

Bachmair, Sophie; Svensson, Cecilia; Prosdocimi, Ilaria; Hannaford, Jamie; Helm Smith, Kelly; Svoboda, Mark; Stahl, Kerstin

2016-04-01

While damage or vulnerability functions for floods and seismic hazards have gained considerable attention, there is comparably little knowledge on drought damage or loss. On the one hand this is due to the complexity of the drought hazard affecting different domains of the hydrological cycle and different sectors of human activity. Hence, a single hazard indicator is likely not able to fully capture this multifaceted hazard. On the other hand, drought impacts are often non-structural and hard to quantify or monetize. Examples are impaired navigability of streams, restrictions on domestic water use, reduced hydropower production, reduced tree growth, and irreversible deterioration/loss of wetlands. Apart from reduced crop yield, data about drought damage or loss with adequate spatial and temporal resolution is scarce, making the development of drought damage functions difficult. As an intermediate step towards drought damage functions we exploit text-based reports on drought impacts from the European Drought Impact report Inventory and the US Drought Impact Reporter to derive surrogate information for drought damage or loss. First, text-based information on drought impacts is converted into timeseries of absence versus presence of impacts, or number of impact occurrences. Second, meaningful hydro-meteorological indicators characterizing drought intensity are identified. Third, different statistical models are tested as link functions relating drought hazard indicators with drought impacts: 1) logistic regression for drought impacts coded as binary response variable; and 2) mixture/hurdle models (zero-inflated/zero-altered negative binomial regression) and an ensemble regression tree approach for modeling the number of drought impact occurrences. Testing the predictability of (number of) drought impact occurrences based on cross-validation revealed a good agreement between observed and modeled (number of) impacts for regions at the scale of federal states or

Drought, Agriculture, and Labor: Understanding Drought Impacts and Vulnerability in California

NASA Astrophysics Data System (ADS)

Greene, C.

2015-12-01

Hazardous drought impacts are a product of not only the physical intensity of drought, but also the economic, social, and environmental characteristics of the region exposed to drought. Drought risk management requires understanding the complex links between the physical and human dimensions of drought. Yet, there is a research gap in identifying and explaining the socio-economic complexities of drought in the context of the first world, especially for economic and socially marginal groups who rely on seasonal and temporary jobs. This research uses the current drought in California as a case study to identify the socioeconomic impacts of drought on farmworker communities in California's San Joaquin Valley, with a specific focus on the relationship between drought and agricultural labor. Through both a narrative analysis of drought coverage in newspaper media, drought policy documents, and interviews with farmworkers, farmers, community based organizations, and government officials in the San Joaquin Valley, this research aims to highlight the different understandings and experiences of the human impacts of drought and drought vulnerability in order to better inform drought risk planning and policy.

Nuclear-localized AtHSPR links abscisic acid-dependent salt tolerance and antioxidant defense in Arabidopsis.

PubMed

Yang, Tao; Zhang, Liang; Hao, Hongyan; Zhang, Peng; Zhu, Haowei; Cheng, Wei; Wang, Yongli; Wang, Xinyu; Wang, Chongying

2015-12-01

Salt stress from soil or irrigation water limits plant growth. A T-DNA insertion mutant in C24, named athspr (Arabidopsis thaliana heat shock protein-related), showed several phenotypes, including reduced organ size and enhanced sensitivity to environmental cues. The athspr mutant is severely impaired under salinity levels at which wild-type (WT) plants grow normally. AtHSPR encodes a nuclear-localized protein with ATPase activity, and its expression was enhanced by high salinity and abscisic acid (ABA). Overexpression (OE) of AtHSPR significantly enhanced tolerance to salt stress by increasing the activities of the antioxidant system and by maintaining K(+) /Na(+) homeostasis. Quantitative RT-PCR analyses showed that OE of AtHSPR increased the expression of ABA/stress-responsive, salt overly sensitive (SOS)-related and antioxidant-related genes. In addition, ABA content was reduced in athspr plants with or without salt stress, and exogenous ABA restored WT-like salt tolerance to athspr plants. athspr exhibited increased leaf stomatal density and stomatal index, slower ABA-induced stomatal closure and reduced drought tolerance relative to the WT. AtHSPR OE enhanced drought tolerance by reducing leaf water loss and stomatal aperture. Transcript profiling in athspr showed a differential salt-stress response for genes involved in accumulation of reactive oxygen species (ROS), ABA signaling, cell death, stress response and photosynthesis. Taken together, our results suggested that AtHSPR is involved in salt tolerance in Arabidopsis through modulation of ROS levels, ABA-dependent stomatal closure, photosynthesis and K(+) /Na(+) homeostasis. © 2015 The Authors The Plant Journal © 2015 John Wiley & Sons Ltd.

Reply to Comment on 'Drought Variability in the Eastern Australia and New Zealand Summer Drought Atlas (ANZDA, CE 1500-2012) Modulated by the Interdecadal Pacific Oscillation'

NASA Technical Reports Server (NTRS)

Palmer, Jonathan G.; Cook, Edward R.; Turney, Chris S. M.; Allen, Kathy; Fenwick, Pavla; Cook, Benjamin I.; O'Donnell, Alison; Lough, Janice; Grierson, Pauline; Baker, Patrick J.

2017-01-01

This reply is in response to Vance et al (2017), who expressed concern that their Law Dome summer sea salt record (LDsss; Vance et al 2013) and two Interdecadal Pacific Oscillation (IPO) reconstructions (PLF and DT-median; Vance et al 2015) were not compared properly in our recent study (Palmer et al 2015) describing the eastern Australian and New Zealand summer Drought Atlas (ANZDA) and that this omission mischaracterizes their records.

Non-linear effects of drought under shade: reconciling physiological and ecological models in plant communities.

PubMed

Holmgren, Milena; Gómez-Aparicio, Lorena; Quero, José Luis; Valladares, Fernando

2012-06-01

The combined effects of shade and drought on plant performance and the implications for species interactions are highly debated in plant ecology. Empirical evidence for positive and negative effects of shade on the performance of plants under dry conditions supports two contrasting theoretical models about the role of shade under dry conditions: the trade-off and the facilitation hypotheses. We performed a meta-analysis of field and greenhouse studies evaluating the effects of drought at two or more irradiance levels on nine response variables describing plant physiological condition, growth, and survival. We explored differences in plant response across plant functional types, ecosystem types and methodological approaches. The data were best fit using quadratic models indicating a humped-back shape response to drought along an irradiance gradient for survival, whole plant biomass, maximum photosynthetic capacity, stomatal conductance and maximal photochemical efficiency. Drought effects were ameliorated at intermediate irradiance, becoming more severe at higher or lower light levels. This general pattern was maintained when controlling for potential variations in the strength of the drought treatment among light levels. Our quantitative meta-analysis indicates that dense shade ameliorates drought especially among drought-intolerant and shade-tolerant species. Wet tropical species showed larger negative effects of drought with increasing irradiance than semiarid and cold temperate species. Non-linear responses to irradiance were stronger under field conditions than under controlled greenhouse conditions. Non-linear responses to drought along the irradiance gradient reconciliate opposing views in plant ecology, indicating that facilitation is more likely within certain range of environmental conditions, fading under deep shade, especially for drought-tolerant species.

Spatiotemporal Drought Analysis and Drought Indices Comparison in India

NASA Astrophysics Data System (ADS)

Janardhanan, A.

2017-12-01

Droughts and floods are an ever-occurring phenomenon that has been wreaking havoc on humans since the start of time. As droughts are on a very large scale, studying them within a regional context can minimize confounding factors such as climate change. Droughts and floods are extremely erratic and very difficult to predict and therefore necessitate modeling through advanced statistics. The SPI (Standard Precipitation Index) and the SPEI (Standard Precipitation Evapotranspiration Index) are two ways to temporally model drought and flood patterns across each metrological sub basin in India over a variety of different time scales. SPI only accounts for precipitation values, while the SPEI accounts for both precipitation and temperature and is commonly regarded as a more reliable drought index. Using monthly rainfall and temperature data from 1871-2016, these two indices were calculated. The results depict the drought and flood severity index, length of drought, and average SPI or SPEI value for each meteorological sub region in India. A Wilcox Ranksum test was then conducted to determine whether these two indices differed over the long term for drought analysis. The drought return periods were analyzed to determine if the population mean differed between the SPI and SPEI values. Our analysis found no statistical difference between SPI and SPEI with regards to long-term drought analysis. This indicates that temperature is not needed when modeling drought on a long-term time scale and that SPI is just as effective as SPEI, which has the potential to save a lot of time and resources on calculating drought indices.

Stress-responsive expression patterns and functional characterization of cold shock domain proteins in cabbage (Brassica rapa) under abiotic stress conditions.

PubMed

Choi, Min Ji; Park, Ye Rin; Park, Su Jung; Kang, Hunseung

2015-11-01

Although the functional roles of cold shock domain proteins (CSDPs) have been demonstrated during the growth, development, and stress adaptation of Arabidopsis (Arabidopsis thaliana), rice (Oryza sativa), and wheat (Triticum aestivum), the functions of CSDPs in other plants species, including cabbage (Brassica rapa), are largely unknown. To gain insight into the roles of CSDPs in cabbage under stress conditions, the genes encoding CSDPs in cabbage were isolated, and the functional roles of CSDPs in response to environmental stresses were analyzed. Real-time RT-PCR analysis revealed that the levels of BrCSDP transcripts increased during cold, salt, or drought stress, as well as upon ABA treatment. Among the five BrCSDP genes found in the cabbage genome, one CSDP (BRU12051), named BrCSDP3, was unique in that it is localized to the chloroplast as well as to the nucleus. Ectopic expression of BrCSDP3 in Arabidopsis resulted in accelerated seed germination and better seedling growth compared to the wild-type plants under high salt or dehydration stress conditions, and in response to ABA treatment. BrCSDP3 did not affect the splicing of intron-containing genes and processing of rRNAs in the chloroplast. BrCSDP3 had the ability to complement RNA chaperone-deficient Escherichia coli mutant cells under low temperatures as well as DNA- and RNA-melting abilities, suggesting that it possesses RNA chaperone activity. Taken together, these results suggest that BrCSDP3, harboring RNA chaperone activity, plays a role as a positive regulator in seed germination and seedling growth under stress conditions. Copyright © 2015 Elsevier Masson SAS. All rights reserved.

Impacts of droughts on carbon sequestration by China's terrestrial ecosystems from 2000 to 2011

NASA Astrophysics Data System (ADS)

Liu, Y. B.; Zhou, Y. L.; Ju, W. M.; Wang, S. Q.; Wu, X. C.; He, M. Z.

2013-11-01

In recent years, droughts have frequently hit China's terrestrial ecosystems. How these droughts affected carbon sequestration by China's terrestrial ecosystems is still unclear. In this study, the process-based Boreal Ecosystem Productivity Simulator (BEPS) model, driven by remotely sensed vegetation parameters, was employed to assess the effects of droughts on net ecosystem productivity (NEP) of terrestrial ecosystems in China for the period from 2000 to 2011. Different categories of droughts, as indicated by a standard precipitation index (SPI), extensively hit terrestrial ecosystems in China, particularly in 2001, 2006, 2009 and 2011. The national total NEP exhibited a slight decline of -11.3 Tg C yr-2 during the study period, mainly due to large reductions of NEP in typical drought-hit years 2001, 2006, 2009 and 2011, ranging from 61.1 Tg C yr-1 to 168.8 Tg C yr-1. National and regional total NEP anomalies were correlated with corresponding annual mean SPI, especially in Northwest China, North China, Central China, and Southwest China. In drought years, the reductions of NEP might be caused by a larger decrease in gross primary productivity (GPP) than in respiration (RE) (2001 and 2011), a decrease in GPP and an increase in RE (2009), or a larger increase in RE than in GPP (2006). Droughts had lagged effects of up to 3-6 months on NEP due to different reactions of GPP and RE to droughts. In east humid and warm parts of China, droughts have predominant and short-term lagged influences on NEP. In western cold and arid regions, the effects of droughts on NEP were relatively weaker and might last for a longer period of time.

Constitutive Expression of a miR319 Gene Alters Plant Development and Enhances Salt and Drought Tolerance in Transgenic Creeping Bentgrass1[W][OA

PubMed Central

Zhou, Man; Li, Dayong; Li, Zhigang; Hu, Qian; Yang, Chunhua; Zhu, Lihuang; Luo, Hong

2013-01-01

MicroRNA319 (miR319) is one of the first characterized and conserved microRNA families in plants and has been demonstrated to target TCP (for TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTORS [PCF]) genes encoding plant-specific transcription factors. MiR319 expression is regulated by environmental stimuli, suggesting its involvement in plant stress response, although experimental evidence is lacking and the underlying mechanism remains elusive. This study investigates the role that miR319 plays in the plant response to abiotic stress using transgenic creeping bentgrass (Agrostis stolonifera) overexpressing a rice (Oryza sativa) miR319 gene, Osa-miR319a. We found that transgenic plants overexpressing Osa-miR319a displayed morphological changes and exhibited enhanced drought and salt tolerance associated with increased leaf wax content and water retention but reduced sodium uptake. Gene expression analysis indicated that at least four putative miR319 target genes, AsPCF5, AsPCF6, AsPCF8, and AsTCP14, and a homolog of the rice NAC domain gene AsNAC60 were down-regulated in transgenic plants. Our results demonstrate that miR319 controls plant responses to drought and salinity stress. The enhanced abiotic stress tolerance in transgenic plants is related to significant down-regulation of miR319 target genes, implying their potential for use in the development of novel molecular strategies to genetically engineer crop species for enhanced resistance to environmental stress. PMID:23292790

Dehydrins from wheat x Thinopyrum ponticum amphiploid increase salinity and drought tolerance under their own inducible promoters without growth retardation.

PubMed

Qin, Yu-Xiang; Qin, Fangyuan

2016-02-01

Dehydrins confer abiotic stress tolerance in seedlings, but few dehydrins have been studied by transgenic analysis under their own promoters in relation to abiotic stress tolerance. Also the inducible promoters for transgenic engineering are limited. In this study, we isolated from wheat three salt-induced YSK2 dehydrin genes and their promoters. The cDNA sequences were 711, 785, and 932 bp in length, encoding proteins containing 133, 166 and 231 amino acids, respectively, and were named TaDHN1, TaDHN2, and TaDHN3. TaDHN2 doesn't contain introns, while the other two genes each contain one. Semi-quantitative reverse transcription PCR analysis revealed all three dehydrin genes are substantially induced by ABA and NaCl, but only TaDHN2 is induced in seedlings by PEG and by cold (4 °C). Regulatory sequences upstream of the first translation codon (775, 1615 and 889 bp) of the three dehydrin genes were also cloned. Cis-element prediction indicated the presence of ABRE and other abiotic-stress-related elements. Histochemical analysis using GUS expression demonstrated that all three promoters were induced by ABA, cold or NaCl. Ectopic over-expression of TaDHN1 or TaDHN3 in Arabidopsis under their own inducible promoters enhanced NaCl- and drought-stress tolerance without growth retardation. Copyright © 2015 Elsevier Masson SAS. All rights reserved.

Albedo of cold sea ice with precipitated salt on the tropical ocean of Snowball Earth: field measurements and laboratory experiments

NASA Astrophysics Data System (ADS)

Light, B.; Black, T.; Carns, R.; Brandt, R.; Dadic, R.; Warren, S.

2012-04-01

During the initial freezing of the tropical ocean on Snowball Earth, the first ice to form would be sea ice, which contains salt within liquid brine inclusions. At temperatures below -23 C, significant amounts of salt begin to crystallize within the brine inclusions. These crystals scatter light, increasing the ice albedo. The most abundant salt is hydrohalite, NaCl.2H2O. A dry tropical atmosphere promoting ice surface sublimation would cause a salt crust to be left on the surface as a lag deposit. Such a high-albedo surface could be crucial during the snowball initiation. These processes must be considered when assigning albedos to sea ice in a climate model of Snowball Earth. Precipitation of salt within brine inclusions was observed on windswept bare ice of McMurdo Sound at the coast of Antarctica (78 S) in late winter. Consequently the albedo was higher at lower temperature. The precipitation process exhibited hysteresis, with hydrohalite precipitating at about -30 C and dissolving at about -23 C. The causes of the hysteresis are being investigated in laboratory experiments; they may involve biological macromolecules. Nowhere on the modern Earth does sea ice undergo sublimation at low temperatures for long enough to develop a salt crust before the summer melt begins, so this process is being investigated in our laboratory. A 1000-liter tank is used to grow artificial sea ice, and a system has been built to measure its albedo. A diffusely reflecting hemispherical dome of diameter 1.2 m is placed on top of the tank and illuminated from within. The interior of the dome illuminates the ice surface as well as serving as a platform for detecting the incident and backscattered radiance fields. The diffusely reflecting surfaces of the ice and the dome make it straightforward to estimate incoming and reflected irradiance as angular integrals of the radiance measurements. The albedo of the bare, cold (below -23 C) ice is 0.8 at visible wavelengths, decreasing toward the

Ectopic Overexpression of SsCBF1, a CRT/DRE-Binding Factor from the Nightshade Plant Solanum lycopersicoides, Confers Freezing and Salt Tolerance in Transgenic Arabidopsis

PubMed Central

Zhang, Lili; Li, Zhenjun; Li, Jingfu; Wang, Aoxue

2013-01-01

The C-repeat (CRT)/dehydration-responsive element (DRE) binding factor (CBF/DREB1) transcription factors play a key role in cold response. However, the detailed roles of many plant CBFs are far from fully understood. A CBF gene (SsCBF1) was isolated from the cold-hardy plant Solanum lycopersicoides. A subcellular localization study using GFP fusion protein indicated that SsCBF1 is localized in the nucleus. We delimited the SsCBF1 transcriptional activation domain to the C-terminal segment comprising amino acid residues 193–228 (SsCBF1193–228). The expression of SsCBF1 could be dramatically induced by cold, drought and high salinity. Transactivation assays in tobacco leaves revealed that SsCBF1 could specifically bind to the CRT cis-elements in vivo to activate the expression of downstream reporter genes. The ectopic overexpression of SsCBF1 conferred increased freezing and high-salinity tolerance and late flowering phenotype to transgenic Arabidopsis. RNA-sequencing data exhibited that a set of cold and salt stress responsive genes were up-regulated in transgenic Arabidopsis. Our results suggest that SsCBF1 behaves as a typical CBF to contribute to plant freezing tolerance. Increased resistance to high-salinity and late flowering phenotype derived from SsCBF1 OE lines lend more credence to the hypothesis that plant CBFs participate in diverse physiological and biochemical processes related to adverse conditions. PMID:23755095

Acute salt marsh dieback in the Mississippi River deltaic plain: A drought-induced phenomenon?

USGS Publications Warehouse

McKee, K.L.; Mendelssohn, I.A.; Materne, M.D.

2004-01-01

Aims Extensive dieback of salt marsh dominated by the perennial grass Spartina alterniflora occurred throughout the Mississippi River deltaic plain during 2000. More than 100,000 ha were affected, with 43,000 ha severely damaged. The aim of this work was to determine if sudden dieback could have been caused by a coincident drought and to assess the significance of this event with respect to long-term changes in coastal vegetation. Location Multiple dieback sites and reference sites were established along 150 km of shoreline in coastal Louisiana, USA. Methods Aerial and ground surveys were conducted from June 2000 to September 2001 to assess soil conditions and plant mortality and recovery. Results Dieback areas ranged in size from???300 m2-5 km2 in area with 50-100% mortality of plant shoots and rhizomes in affected zones. Co-occurring species such as Avicennia germinans (black mangrove) and Juncus roemerianus (needlegrass rush) were unaffected. Historical records indicate that precipitation, river discharge, and mean sea level were unusually low during the previous year. Although the cause of dieback is currently unknown, plant and soil characteristics were consistent with temporary soil desiccation that may have reduced water availability, increased soil salinity, and/or caused soil acidification (via pyrite oxidation) and increased uptake of toxic metals such as Fe or Al. Plant recovery 15 months after dieback was variable (0-58% live cover), but recovering plants were vigorous and indicated no longlasting effects of the dieback agent. Main conclusions These findings have relevance for global change models of coastal ecosystems that predict vegetation responses based primarily on long-term increases in sea level and submergence of marshes. Our results suggest that large-scale changes in coastal vegetation may occur over a relatively short time span through climatic extremes acting in concert with sea-level fluctuations and pre-existing soil conditions. ?? 2004

Characterization of a novel plantain Asr gene, MpAsr, that is regulated in response to infection of Fusarium oxysporum f. sp. cubense and abiotic stresses.

PubMed

Liu, Hai-Yan; Dai, Jin-Ran; Feng, Dong-Ru; Liu, Bing; Wang, Hong-Bin; Wang, Jin-Fa

2010-03-01

Asr (abscisic acid, stress, ripening induced) genes are typically upregulated by a wide range of factors, including drought, cold, salt, abscisic acid (ABA) and injury; in addition to plant responses to developmental and environmental signals. We isolated an Asr gene, MpAsr, from a suppression subtractive hybridization (SSH) cDNA library of cold induced plantain (Musa paradisiaca) leaves. MpAsr expression was upregulated in Fusarium oxysporum f. sp. cubense infected plantain leaves, peels and roots, suggesting that MpAsr plays a role in plantain pathogen response. In addition, a 581-bp putative promoter region of MpAsr was isolated via genome walking and cis-elements involved in abiotic stress and pathogen-related responses were detected in this same region. Furthermore, the MpAsr promoter demonstrated positive activity and inducibility in tobacco under F. oxysporum f. sp. cubense infection and ABA, cold, dehydration and high salt concentration treatments. Interestingly, transgenic Arabidopsis plants overexpressing MpAsr exhibited higher drought tolerance, but showed no significant decreased sensitivity to F. oxysporum f. sp. cubense. These results suggest that MpAsr might be involved in plant responses to both abiotic stress and pathogen attack.

Drought occurence

Treesearch

John W. Coulston

2007-01-01

Why Is Drought Important? Drought is an important forest disturbance that occurs regularly in the Western United States and irregularly in the Eastern United States (Dale and others 2001). Moderate drought stress tends to slow plant growth while severedrought stress can also reduce photosynthesis (Kareiva and others 1993). Drought can also interact with...

Comprehensive drought characteristics analysis based on a nonlinear multivariate drought index

NASA Astrophysics Data System (ADS)

Yang, Jie; Chang, Jianxia; Wang, Yimin; Li, Yunyun; Hu, Hui; Chen, Yutong; Huang, Qiang; Yao, Jun

2018-02-01

It is vital to identify drought events and to evaluate multivariate drought characteristics based on a composite drought index for better drought risk assessment and sustainable development of water resources. However, most composite drought indices are constructed by the linear combination, principal component analysis and entropy weight method assuming a linear relationship among different drought indices. In this study, the multidimensional copulas function was applied to construct a nonlinear multivariate drought index (NMDI) to solve the complicated and nonlinear relationship due to its dependence structure and flexibility. The NMDI was constructed by combining meteorological, hydrological, and agricultural variables (precipitation, runoff, and soil moisture) to better reflect the multivariate variables simultaneously. Based on the constructed NMDI and runs theory, drought events for a particular area regarding three drought characteristics: duration, peak, and severity were identified. Finally, multivariate drought risk was analyzed as a tool for providing reliable support in drought decision-making. The results indicate that: (1) multidimensional copulas can effectively solve the complicated and nonlinear relationship among multivariate variables; (2) compared with single and other composite drought indices, the NMDI is slightly more sensitive in capturing recorded drought events; and (3) drought risk shows a spatial variation; out of the five partitions studied, the Jing River Basin as well as the upstream and midstream of the Wei River Basin are characterized by a higher multivariate drought risk. In general, multidimensional copulas provides a reliable way to solve the nonlinear relationship when constructing a comprehensive drought index and evaluating multivariate drought characteristics.

Drought-induced recharge promotes long-term storage of porewater salinity beneath a prairie wetland

NASA Astrophysics Data System (ADS)

Levy, Zeno F.; Rosenberry, Donald O.; Moucha, Robert; Mushet, David M.; Goldhaber, Martin B.; LaBaugh, James W.; Fiorentino, Anthony J.; Siegel, Donald I.

2018-02-01

Subsurface storage of sulfate salts allows closed-basin wetlands in the semiarid Prairie Pothole Region (PPR) of North America to maintain moderate surface water salinity (total dissolved solids [TDS] from 1 to 10 g L-1), which provides critical habitat for communities of aquatic biota. However, it is unclear how the salinity of wetland ponds will respond to a recent shift in mid-continental climate to wetter conditions. To understand better the mechanisms that control surface-subsurface salinity exchanges during regional dry-wet climate cycles, we made a detailed geoelectrical study of a closed-basin prairie wetland (P1 in the Cottonwood Lake Study Area, North Dakota) that is currently experiencing record wet conditions. We found saline lenses of sulfate-rich porewater (TDS > 10 g L-1) contained in fine-grained wetland sediments 2-4 m beneath the bathymetric low of the wetland and within the currently ponded area along the shoreline of a prior pond stand (c. 1983). During the most recent drought (1988-1993), the wetland switched from a groundwater discharge to recharge function, allowing salts dissolved in surface runoff to move into wetland sediments beneath the bathymetric low of the basin. However, groundwater levels during this time did not decline to the elevation of the saline lenses, suggesting these features formed during more extended paleo-droughts and are stable in the subsurface on at least centennial timescales. We hypothesize a "drought-induced recharge" mechanism that allows wetland ponds to maintain moderate salinity under semiarid climate. Discharge of drought-derived saline groundwater has the potential to increase the salinity of wetland ponds during wet climate.

Seasonal drought ensemble predictions based on multiple climate models in the upper Han River Basin, China

NASA Astrophysics Data System (ADS)

Ma, Feng; Ye, Aizhong; Duan, Qingyun

2017-03-01

An experimental seasonal drought forecasting system is developed based on 29-year (1982-2010) seasonal meteorological hindcasts generated by the climate models from the North American Multi-Model Ensemble (NMME) project. This system made use of a bias correction and spatial downscaling method, and a distributed time-variant gain model (DTVGM) hydrologic model. DTVGM was calibrated using observed daily hydrological data and its streamflow simulations achieved Nash-Sutcliffe efficiency values of 0.727 and 0.724 during calibration (1978-1995) and validation (1996-2005) periods, respectively, at the Danjiangkou reservoir station. The experimental seasonal drought forecasting system (known as NMME-DTVGM) is used to generate seasonal drought forecasts. The forecasts were evaluated against the reference forecasts (i.e., persistence forecast and climatological forecast). The NMME-DTVGM drought forecasts have higher detectability and accuracy and lower false alarm rate than the reference forecasts at different lead times (from 1 to 4 months) during the cold-dry season. No apparent advantage is shown in drought predictions during spring and summer seasons because of a long memory of the initial conditions in spring and a lower predictive skill for precipitation in summer. Overall, the NMME-based seasonal drought forecasting system has meaningful skill in predicting drought several months in advance, which can provide critical information for drought preparedness and response planning as well as the sustainable practice of water resource conservation over the basin.

From QTL to variety-harnessing the benefits of QTLs for drought, flood and salt tolerance in mega rice varieties of India through a multi-institutional network.

PubMed

Singh, Renu; Singh, Yashi; Xalaxo, Suchit; Verulkar, S; Yadav, Neera; Singh, Shweta; Singh, Nisha; Prasad, K S N; Kondayya, K; Rao, P V Ramana; Rani, M Girija; Anuradha, T; Suraynarayana, Y; Sharma, P C; Krishnamurthy, S L; Sharma, S K; Dwivedi, J L; Singh, A K; Singh, P K; Nilanjay; Singh, N K; Kumar, Rajesh; Chetia, S K; Ahmad, T; Rai, M; Perraju, P; Pande, Anita; Singh, D N; Mandal, N P; Reddy, J N; Singh, O N; Katara, J L; Marandi, B; Swain, P; Sarkar, R K; Singh, D P; Mohapatra, T; Padmawathi, G; Ram, T; Kathiresan, R M; Paramsivam, K; Nadarajan, S; Thirumeni, S; Nagarajan, M; Singh, A K; Vikram, Prashant; Kumar, Arvind; Septiningshih, E; Singh, U S; Ismail, A M; Mackill, D; Singh, Nagendra K

2016-01-01

Rice is a staple cereal of India cultivated in about 43.5Mha area but with relatively low average productivity. Abiotic factors like drought, flood and salinity affect rice production adversely in more than 50% of this area. Breeding rice varieties with inbuilt tolerance to these stresses offers an economically viable and sustainable option to improve rice productivity. Availability of high quality reference genome sequence of rice, knowledge of exact position of genes/QTLs governing tolerance to abiotic stresses and availability of DNA markers linked to these traits has opened up opportunities for breeders to transfer the favorable alleles into widely grown rice varieties through marker-assisted backcross breeding (MABB). A large multi-institutional project, "From QTL to variety: marker-assisted breeding of abiotic stress tolerant rice varieties with major QTLs for drought, submergence and salt tolerance" was initiated in 2010 with funding support from Department of Biotechnology, Government of India, in collaboration with International Rice Research Institute, Philippines. The main focus of this project is to improve rice productivity in the fragile ecosystems of eastern, northeastern and southern part of the country, which bear the brunt of one or the other abiotic stresses frequently. Seven consistent QTLs for grain yield under drought, namely, qDTY1.1, qDTY2.1, qDTY2.2, qDTY3.1, qDTY3.2, qDTY9.1 and qDTY12.1 are being transferred into submergence tolerant versions of three high yielding mega rice varieties, Swarna-Sub1, Samba Mahsuri-Sub1 and IR 64-Sub1. To address the problem of complete submergence due to flash floods in the major river basins, the Sub1 gene is being transferred into ten highly popular locally adapted rice varieties namely, ADT 39, ADT 46, Bahadur, HUR 105, MTU 1075, Pooja, Pratikshya, Rajendra Mahsuri, Ranjit, and Sarjoo 52. Further, to address the problem of soil salinity, Saltol, a major QTL for salt tolerance is being transferred into

High-quality permanent draft genome sequence of Ensifer meliloti strain 4H41, an effective salt- and drought-tolerant microsymbiont of Phaseolus vulgaris

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mhamdi, Ridha; Ardley, Julie; Tian, Rui

We report that Ensifer meliloti 4H41 is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of common bean (Phaseolus vulgaris). Strain 4H41 was isolated in 2002 from root nodules of P. vulgaris grown in South Tunisia from the oasis of Rjim-Maatoug. Strain 4H41 is salt- and drought-tolerant and highly effective at fixing nitrogen with P. vulgaris. Here we describe the features of E. meliloti 4H41, together with genome sequence information and its annotation. The 6,795,637 bp high-quality permanent draft genome is arranged into 47 scaffolds of 47 contigs containing 6,350more » protein-coding genes and 72 RNA-only encoding genes, and is one of the rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project proposal.« less

High-quality permanent draft genome sequence of Ensifer meliloti strain 4H41, an effective salt- and drought-tolerant microsymbiont of Phaseolus vulgaris

DOE PAGES

Mhamdi, Ridha; Ardley, Julie; Tian, Rui; ...

2015-07-02

We report that Ensifer meliloti 4H41 is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of common bean (Phaseolus vulgaris). Strain 4H41 was isolated in 2002 from root nodules of P. vulgaris grown in South Tunisia from the oasis of Rjim-Maatoug. Strain 4H41 is salt- and drought-tolerant and highly effective at fixing nitrogen with P. vulgaris. Here we describe the features of E. meliloti 4H41, together with genome sequence information and its annotation. The 6,795,637 bp high-quality permanent draft genome is arranged into 47 scaffolds of 47 contigs containing 6,350more » protein-coding genes and 72 RNA-only encoding genes, and is one of the rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project proposal.« less

Ectopic expression of PgRab7 in rice plants (Oryza sativa L.) results in differential tolerance at the vegetative and seed setting stage during salinity and drought stress.

PubMed

Tripathy, Manas Kumar; Tiwari, Budhi Sagar; Reddy, Malireddy K; Deswal, Renu; Sopory, Sudhir K

2017-01-01

In this work, we have overexpressed a vesicle trafficking protein, Rab7, from a stress-tolerant plant, Pennisetum glaucum, in a high-yielding but stress-sensitive rice variety Pusa Basmati-1 (PB-1). The transgenic rice plants were tested for tolerance against salinity and drought stress. The transgenic plants showed considerable tolerance at the vegetative stage against both salinity (200 mM NaCl) and drought stress (up to 12 days after withdrawing water). The protection against salt and drought stress may be by regulating Na + ion homeostasis, as the transgenic plants showed altered expression of multiple transporter genes, including OsNHX1, OsNHX2, OsSOS1, OsVHA, and OsGLRs. In addition, decreased generation and maintenance of lesser reactive oxygen species (ROS), with maintenance of chloroplast grana and photosynthetic machinery was observed. When evaluated for reproductive growth, 89-96 % of seed setting was maintained in transgenic plants during drought stress; however, under salt stress, a 33-53 % decrease in seed setting was observed. These results indicate that PgRab7 overexpression in rice confers differential tolerance at the seed setting stage during salinity and drought stress and could be a favored target for raising drought-tolerant crops.

DroughtView: Satellite Based Drought Monitoring and Assessment

NASA Astrophysics Data System (ADS)

Hartfield, K. A.; Van Leeuwen, W. J. D.; Crimmins, M.; Marsh, S. E.; Torrey, Y.; Rahr, M.; Orr, B. J.

2014-12-01

Drought is an ever growing concern within the United States and Mexico. Extended periods of below-average precipitation can adversely affect agricultural production and ecosystems, impact local water resources and create conditions prime for wildfire. DroughtView (www.droughtview.arizona.edu) is a new on-line resource for scientists, natural resource managers, and the public that brings a new perspective to remote-sensing based drought impact assessment that is not currently available. DroughtView allows users to monitor the impact of drought on vegetation cover for the entire continental United States and the northern regions of Mexico. As a spatially and temporally dynamic geospatial decision support tool, DroughtView is an excellent educational introduction to the relationship between remotely sensed vegetation condition and drought. The system serves up Normalized Difference Vegetation Index (NDVI) and Enhanced Vegetation Index (EVI) data generated from 250 meter 16-day composite Moderate-resolution Imaging Spectroradiometer (MODIS) imagery from 2000 to the present. Calculation of difference from average, previous period and previous year greenness products provide the user with a proxy for drought conditions and insight on the secondary impacts of drought, such as wildfire. The various image products and overlays are served up via the ArcGIS Server platform. DroughtView serves as a useful tool to introduce and teach vegetation time series analysis to those unfamiliar with the science. High spatial resolution imagery is available as a reference layer to locate points of interest, zoom in and export images for implementation in reports and presentations. Animation of vegetation time series allows users to examine ecosystem disturbances and climate data is also available to examine the relationship between precipitation, temperature and vegetation. The tool is mobile friendly allowing users to access the system while in the field. The systems capabilities and

Towards developing drought impact functions to advance drought monitoring and early warning

NASA Astrophysics Data System (ADS)

Bachmair, Sophie; Stahl, Kerstin; Hannaford, Jamie; Svoboda, Mark

2015-04-01

In natural hazard analysis, damage functions (also referred to as vulnerability or susceptibility functions) relate hazard intensity to the negative effects of the hazard event, often expressed as damage ratio or monetary loss. While damage functions for floods and seismic hazards have gained considerable attention, there is little knowledge on how drought intensity translates into ecological and socioeconomic impacts. One reason for this is the multifaceted nature of drought affecting different domains of the hydrological cycle and different sectors of human activity (for example, recognizing meteorological - agricultural - hydrological - socioeconomic drought) leading to a wide range of drought impacts. Moreover, drought impacts are often non-structural and hard to quantify or monetarize (e.g. impaired navigability of streams, bans on domestic water use, increased mortality of aquatic species). Knowledge on the relationship between drought intensity and drought impacts, i.e. negative environmental, economic or social effects experienced under drought conditions, however, is vital to identify critical thresholds for drought impact occurrence. Such information may help to improve drought monitoring and early warning (M&EW), one goal of the international DrIVER project (Drought Impacts: Vulnerability thresholds in monitoring and Early-warning Research). The aim of this study is to test the feasibility of designing "drought impact functions" for case study areas in Europe (Germany and UK) and the United States to derive thresholds meaningful for drought impact occurrence; to account for the multidimensionality of drought impacts, we use the broader term "drought impact function" over "damage function". First steps towards developing empirical drought impact functions are (1) to identify meaningful indicators characterizing the hazard intensity (e.g. indicators expressing a precipitation or streamflow deficit), (2) to identify suitable variables representing impacts

Probabilistic drought intensification forecasts using temporal patterns of satellite-derived drought indicators

NASA Astrophysics Data System (ADS)

Park, Sumin; Im, Jungho; Park, Seonyeong

2016-04-01

A drought occurs when the condition of below-average precipitation in a region continues, resulting in prolonged water deficiency. A drought can last for weeks, months or even years, so can have a great influence on various ecosystems including human society. In order to effectively reduce agricultural and economic damage caused by droughts, drought monitoring and forecasts are crucial. Drought forecast research is typically conducted using in situ observations (or derived indices such as Standardized Precipitation Index (SPI)) and physical models. Recently, satellite remote sensing has been used for short term drought forecasts in combination with physical models. In this research, drought intensification was predicted using satellite-derived drought indices such as Normalized Difference Drought Index (NDDI), Normalized Multi-band Drought Index (NMDI), and Scaled Drought Condition Index (SDCI) generated from Moderate Resolution Imaging Spectroradiometer (MODIS) and Tropical Rainfall Measuring Mission (TRMM) products over the Korean Peninsula. Time series of each drought index at the 8 day interval was investigated to identify drought intensification patterns. Drought condition at the previous time step (i.e., 8 days before) and change in drought conditions between two previous time steps (e.g., between 16 days and 8 days before the time step to forecast) Results show that among three drought indices, SDCI provided the best performance to predict drought intensification compared to NDDI and NMDI through qualitative assessment. When quantitatively compared with SPI, SDCI showed a potential to be used for forecasting short term drought intensification. Finally this research provided a SDCI-based equation to predict short term drought intensification optimized over the Korean Peninsula.

Spatio-temporal seasonal drought patterns in Europe from 1950 to 2015

NASA Astrophysics Data System (ADS)

Spinoni, Jonathan; Naumann, Gustavo; Vogt, Jürgen

2016-04-01

Drought is one of the natural disasters with severe impacts in Europe, not only in areas which frequently experience water scarcity such as the Mediterranean, but also in temperate or continental climates such as Central and Eastern Europe and even in cold regions such as Scandinavia and Iceland. In this study the spatio-temporal patterns of seasonal meteorological droughts in Europe between 1950 and 2015 are investigated using the Standardized Precipitation Index (SPI) and the Standardized Precipitation-Evapotranspiration Index (SPEI). Since the focus is on the analysis of seasonal drought trends, indicators were calculated for 3 monthly accumulation periods. The input variables of precipitation and temperature were derived from E-OBS grids (v11-v12) at a spatial resolution of 0.25°x0.25°. Seasonal trends of drought frequency and severity were analyzed for moderate (SPI or SPEI <-1.0) and extreme (SPI or SPEI <-2.0) events during the periods 1950-2015 and 1981-2015. For the moderate events, results of the SPI analysis (precipitation driven) demonstrate a significant tendency towards less frequent and severe droughts in Northern Europe and Russia, especially in winter and spring; oppositely, an increasing trend is visible in Southern Europe, mainly in spring and summer. According to the SPEI analysis (precipitation and temperature driven) Northern Europe shows wetting patterns, while Southern and Eastern Europe show a more remarkable drying tendency, especially in summer and autumn for drought frequency and in every season for drought severity. The evolution towards drier conditions is more relevant from 1981 onwards, both in terms of frequency and severity. This is especially true for Central Europe in spring, for the Mediterranean in summer, and for Eastern Europe in autumn. Extreme events follow similar patterns, but in autumn no spatially coherent trend can be found.

Citrulline and DRIP-1 protein (ArgE homologue) in drought tolerance of wild watermelon.

PubMed

Yokota, Akiho; Kawasaki, Shinji; Iwano, Megumi; Nakamura, Chie; Miyake, Chikahiro; Akashi, Kinya

2002-06-01

Drought-affected plants experience more than just desiccation of their organs due to water deficit. Plants transpire 1000 times more molecules of water than of CO2 fixed by photosynthesis in full sunlight. One effect of transpiration is to cool the leaves. Accordingly, drought brings about such multi-stresses as high temperatures, excess photoradiation and other factors that affect plant viability. Wild watermelon serves as a suitable model system to study drought responses of C3 plants, since this plant survives drought by maintaining its water content without any wilting of leaves or desiccation even under severe drought conditions. Under drought conditions in the presence of strong light, wild watermelon accumulates high concentrations of citrulline, glutamate and arginine in its leaves. The accumulation of citrulline and arginine may be related to the induction of DRIP-1, a homologue of ArgE in Escherichia coli, where it functions to incorporate the carbon skeleton of glutamate into the urea cycle. Immunogold electron microscopy reveals the enzyme to be confined exclusively to the cytosol. DRIP-1 is also induced by treating wild watermelon with 150 mM NaCl, but is not induced following treatment with 100 microM abscisic acid. The salt treatment causes the accumulation of gamma-aminobutyrate, glutamine and alanine, in addition to a smaller amount of citrulline. Citrulline may function as a potent hydroxyl radical scavenger.

Drought Risk Identification: Early Warning System of Seasonal Agrometeorological Drought

NASA Astrophysics Data System (ADS)

Dalecios, Nicolas; Spyropoulos, Nicos V.; Tarquis, Ana M.

2014-05-01

By considering drought as a hazard, drought types are classified into three categories, namely meteorological or climatological, agrometeorological or agricultural and hydrological drought and as a fourth class the socioeconomic impacts can be considered. This paper addresses agrometeorological drought affecting agriculture within the risk management framework. Risk management consists of risk assessment, as well as a feedback on the adopted risk reduction measures. And risk assessment comprises three distinct steps, namely risk identification, risk estimation and risk evaluation. This paper deals with the quantification and monitoring of agrometeorological drought, which constitute part of risk identification. For the quantitative assessment of agrometeorological or agricultural drought, as well as the computation of spatiotemporal features, one of the most reliable and widely used indices is applied, namely the Vegetation Health Index (VHI). The computation of VHI is based on satellite data of temperature and the Normalized Difference Vegetation Index (NDVI). The spatiotemporal features of drought, which are extracted from VHI are: areal extent, onset and end time, duration and severity. In this paper, a 20-year (1981-2001) time series of NOAA/AVHRR satellite data is used, where monthly images of VHI are extracted. Application is implemented in Thessaly, which is the major agricultural region of Greece characterized by vulnerable and drought-prone agriculture. The results show that every year there is a seasonal agrometeorological drought with a gradual increase in the areal extent and severity with peaks appearing usually during the summer. Drought monitoring is conducted by monthly remotely sensed VHI images. Drought early warning is developed using empirical relationships of severity and areal extent. In particular, two second-order polynomials are fitted, one for low and the other for high severity drought, respectively. The two fitted curves offer a seasonal

Influence of processing steps in cold-smoked salmon production on survival and growth of persistent and presumed non-persistent Listeria monocytogenes.

PubMed

Porsby, Cisse Hedegaard; Vogel, Birte Fonnesbech; Mohr, Mona; Gram, Lone

2008-03-20

Cold-smoked salmon is a ready-to-eat product in which Listeria monocytogenes sometimes can grow to high numbers. The bacterium can colonize the processing environment and it is believed to survive or even grow during the processing steps. The purpose of the present study was to determine if the steps in the processing of cold-smoked salmon affect survival and subsequent growth of a persistent strain of L. monocytogenes to a lesser degree than presumed non-persistent strains. We used a sequence of experiments increasing in complexity: (i) small salmon blocks salted, smoked or dried under model conditions, (ii) fillets of salmon cold-smoked in a pilot plant and finally, (iii) assessment of the bacterial levels before and after processing during commercial scale production. L. monocytogenes proliferated on salmon blocks that were brined or dipped in liquid smoke and left at 25 degrees C in a humidity chamber for 24 h. However, combining brining and liquid smoke with a drying (25 degrees C) step reduced the bacterium 10-100 fold over a 24 h period. Non-salted, brine injected or dry salted salmon fillets were surface inoculated with L. monocytogenes and cold-smoked in a pilot plant. L. monocytogenes was reduced from 10(3) to 10-10(2) CFU/cm(2) immediately after cold-smoking. The greatest reductions were observed in dry salted and brine injected fillets as compared to cold-smoking of non-salted fresh fillets. Levels of L. monocytogenes decreased further when the cold-smoked fish was vacuum-packed and stored at 5 degrees C. A similar decline was seen when inoculating brine injected fillets after cold-smoking. High phenol concentrations are a likely cause of this marked growth inhibition. In a commercial production facility, the total viable count of salmon fillets was reduced 10-1000 fold by salting, cold-smoking and process-freezing (a freezing step after smoking and before slicing). The prevalence of L. monocytogenes in the commercial production facility was too low to

Salt-induced enhancement of antifreeze protein activity: a salting-out effect.

PubMed

Kristiansen, Erlend; Pedersen, Sindre Andre; Zachariassen, Karl Erik

2008-10-01

Antifreeze proteins are a structurally diverse group of proteins characterized by their unique ability to cause a separation of the melting- and growth-temperatures of ice. These proteins have evolved independently in different kinds of cold-adapted ectothermic animals, including insects and fish, where they protect against lethal freezing of the body fluids. There is a great variability in the capacity of different kinds of antifreeze proteins to evoke the antifreeze effect, but the basis of these differences is not well understood. This study reports on salt-induced enhancement of the antifreeze activity of an antifreeze protein from the longhorn beetle Rhagium inquisitor (L.). The results imply that antifreeze activity is predetermined by a steady-state distribution of the antifreeze protein between the solution and the ice surface region. The observed salt-induced enhancement of the antifreeze activity compares qualitatively and quantitatively with salt-induced lowering of protein solubility. Thus, salts apparently enhance antifreeze activity by evoking a solubility-induced shift in the distribution pattern of the antifreeze proteins in favour of the ice. These results indicate that the solubility of antifreeze proteins in the solution surrounding the ice crystal is a fundamental physiochemical property in relation to their antifreeze potency.

Responses of High-Elevation Cold Desert Shrubs to a Wet Winter After California's Historic Drought of 2012 - 2015.

NASA Astrophysics Data System (ADS)

Loik, M. E.

2016-12-01

California experienced an historic drought between 2011 and late 2015, which caused lasting impacts on plant survival and productivity, community patterns, and ecosystem processes. The winter of 2015-2016 was relatively wet by comparison, with over twice the annual snowfall and total precipitation (479 mm) as during the drought years. This study compared soil water content, water potential, photosynthetic processes, and Net Primary Productivity (NPP) for the widespread, co-dominant shrubs Artemisia tridentata (Asteraceae) and Purshia tridentata (Rosaceae) at the ecotone with Sierra Nevada conifer forest in eastern California (2315 m). Measurements were made in June and July 2014, 2015, and 2016, during the seasonal peak of new leaf, stem, and flower production. Soil water content was twice as high in early summer 2016 compared to 2014 and 2015. Mid-morning stem water potential averaged -1.80 MPa in 2014 and increased to -1.20 MPa in 2016 for A. tridentata; water potential for P. tridentata increased from -2.20 MPa to -1.30 MPa over the same period. Stomatal conductance to water vapor (gs) averaged 0.285 mol m-2 s-1 during the drought and increased almost 3-fold by 2016 for A. tridentata. By contrast, gs for P. tridentata increased by 1.6-fold from dry to wet years. Mean photosynthetic CO2 assimilation (A) was 32 μmol m-2 s-1 in the wet year 2016 for A. tridentata, which was almost twice that during the drought. The change in A was much smaller from wet to dry years for P. tridentata. The A vs. gs response wasmore sensitive to drought for A. tridentata than for P. tridentata. For both species, stomata closed around 11:30 h local time during the drought, but stayed open for the entire daytime during June and July of 2016. NPP was about two-fold greater in 2016 than in 2015 for A. tridentata, but only about 15% greater for P. tridentata over the same time. Results indicate that A. tridentata is capable of appreciable upregulation of photosynthesis and productivity in

Droughts, dry spells, low water levels and their environmental-social consequences in late medieval Hungary (and Croatia)

NASA Astrophysics Data System (ADS)

Kiss, Andrea; Nikolic, Zrinka

2016-04-01

Based on medieval, contemporary evidence, in the presentation 14th-15th-century droughts, dry spells and documented low water-level events of large rivers (e.g. Danube, Tisza) and their detected environmental and social consequences are discussed in more detail, with special emphasis on the years of 1361-1364, 1393-1394, 1440, the early 1540s, 1474, 1479-1480 and 1494. The poster presentation is centred around the following topics: - magnitude, intensity and frequency of droughts and dry spells (in comparison with famous 18th-19th-century drought periods); - provide information (and a comparison) on Central European parallels; - other natural hazards combined with drought and dry spells (e.g. convective events); - the relationship of multiannual water-deficits and locust invasions, their intensity and documented further impacts; - the consequences of droughts, dry spells and low water levels on society, with special emphasis on food production (e.g. bad harvests, grazing permissions, high prices, threatening food shortage), transportation problems (esp. salt transportation), military defence (Ottoman Turkish attacks) and their further social effects (e.g. land-ownership debates; royal intervention and export prohibition).

Does drought legacy alter the recovery of grassland carbon dynamics from drought?

NASA Astrophysics Data System (ADS)

Bahn, M.; Hasibeder, R.; Fuchslueger, L.; Ingrisch, J.; Ladreiter-Knauss, T.; Lair, G.; Reinthaler, D.; Richter, A.; Kaufmann, R.

2016-12-01

Climate projections suggest an increase in the frequency and the severity of extreme climatic events, such as droughts, with consequences for the carbon cycle and its feedbacks to the climate system. An important implication of increasing drought frequency is that possible legacies of previous droughts may increasingly affect ecosystem responses to new drought events, though this has been rarely tested. Based on a series of severe experimental droughts performed during nine subsequent years on a mountain grassland in the Austrian Alps, we present evidence of effects of drought legacies on the recovery of grassland carbon dynamics from drought and analyse the underlying mechanisms. Both single and recurrent droughts led to increased aboveground productivity during drought recovery relative to control plots, favoring the biomass production and leaf area of grass species more strongly than of forbs. Belowground productivity was significantly increased during recovery. This led to higher total root length, even though specific root length was strongly reduced during recovery, particularly after recurrent drought events. Following rewetting, the temperature dependence of soil respiration was increasingly diminished and the Birch effect declined with progressive recurrence of droughts. This was paralleled by a change in soil aggregate stability and soil porosity in plots repeatedly exposed to drought. Pulse-labelling experiments revealed effects of drought legacy on plant carbon uptake and belowground allocation and altered microbial turnover of recent plant-derived carbon during and after a subsequent drought. Shifts in tissue nitrogen concentration indicate that drought effects on soil nitrogen turnover and availability could play an important role in the recovery of grassland carbon dynamics following both single and recurrent droughts. In conclusion, drought legacies can alter the recovery of grassland carbon dynamics from drought, the effects increasing with

Does drought legacy alter the recovery of grassland carbon dynamics from drought?

NASA Astrophysics Data System (ADS)

Bahn, Michael; Hasibeder, Roland; Fuchslueger, Lucia; Ingrisch, Johannes; Ladreiter-Knauss, Thomas; Lair, Georg; Reinthaler, David; Richter, Andreas; Kaufmann, Rüdiger

2017-04-01

Climate projections suggest an increase in the frequency and the severity of extreme climatic events, such as droughts, with consequences for the carbon cycle and its feedbacks to the climate system. An important implication of increasing drought frequency is that possible legacies of previous droughts may increasingly affect ecosystem responses to new drought events, though this has been rarely tested. Based on a series of severe experimental droughts performed during nine subsequent years on a mountain grassland in the Austrian Alps, we present evidence of effects of drought legacies on the recovery of grassland carbon dynamics from drought and analyse the underlying mechanisms. Both single and recurrent droughts led to increased aboveground productivity during drought recovery relative to control plots, favoring the biomass production and leaf area of grass species more strongly than of forbs. Belowground productivity was significantly increased during recovery. This led to higher total root length, even though specific root length was strongly reduced during recovery, particularly after recurrent drought events. Following rewetting, the temperature dependence of soil respiration was increasingly diminished and the Birch effect declined with progressive recurrence of droughts. This was paralleled by a change in soil aggregate stability and soil porosity in plots repeatedly exposed to drought. Isotopic pulse-labelling experiments revealed effects of drought legacy on plant carbon uptake and belowground allocation and altered microbial turnover of recent plant-derived carbon during and after a subsequent drought. Shifts in tissue nitrogen concentration indicate that drought effects on soil nitrogen turnover and availability could play an important role in the recovery of grassland carbon dynamics following both single and recurrent droughts. In conclusion, drought legacies can alter the recovery of grassland carbon dynamics from drought, the effects increasing

Overexpression of a novel salt stress-induced glycine-rich protein gene from alfalfa causes salt and ABA sensitivity in Arabidopsis.

PubMed

Long, Ruicai; Yang, Qingchuan; Kang, Junmei; Zhang, Tiejun; Wang, Huimin; Li, Mingna; Zhang, Ze

2013-08-01

We cloned a novel salt stress-induced glycine-rich protein gene ( MsGRP ) from alfalfa. Its overexpression retards seed germination and seedling growth of transgenic Arabidopsis after salt and ABA treatments. Since soil salinity is one of the most significant abiotic stresses, salt tolerance is required to overcome salinity-induced reductions in crop productivity. Many glycine-rich proteins (GRPs) have been implicated in plant responses to environmental stresses, but the function and importance of some GRPs in stress responses remain largely unknown. Here, we report on a novel salt stress-induced GRP gene (MsGRP) that we isolated from alfalfa. Compared with some glycine-rich RNA-binding proteins, MsGRP contains no RNA recognition motifs and localizes in the cell membrane or cell wall according to the subcellular localization result. MsGRP mRNA is induced by salt, abscisic acid (ABA), and drought stresses in alfalfa seedlings, and its overexpression driven by a constitutive cauliflower mosaic virus-35S promoter in Arabidopsis plants confers salinity and ABA sensitivity compared with WT plants. MsGRP retards seed germination and seedling growth of transgenic Arabidopsis plants after salt and ABA treatments, which implies that MsGRP may affect germination and growth through an ABA-dependent regulation pathway. These results provide indirect evidence that MsGRP plays important roles in seed germination and seedling growth of alfalfa under some abiotic stress conditions.

Analysis and test results for a molten salt thermal energy storage system

NASA Astrophysics Data System (ADS)

Sterrett, R. H.; Scott, O. L.

A system has been developed to provide low cost thermal energy storage using molten salt. It consists of a hot tank to store the 565 C (1050 F) salt and a cold tank to store the 289 C (550 F) salt. The hot tank uses internal insulation protected by a liner to enable the use of a carbon steel shell for structural support. Due to the lower salt temperature, the cold tank can be a carbon steel shell with external insulation. This paper describes an analytical method used to predict the thermal performance of such systems and presents experimental data from a Subsystem Research Experiment (SRE) conducted by Martin Marietta Aerospace, Solar Energy Systems under contract from Sandia National Laboratories, Livermore, CA. The results from three of the SRE test cases are compared with the STS model results. These are (1) steady state operation, (2) concurrent charging and discharging, and (3) transient cooldown. The temperature differences between the analytical and experimental results were less than 10%. The internally insulated hot tank performed well.

Utilizing Objective Drought Thresholds to Improve Drought Monitoring with the SPI

NASA Astrophysics Data System (ADS)

Leasor, Z. T.; Quiring, S. M.

2017-12-01

Drought is a prominent climatic hazard in the south-central United States. Droughts are frequently monitored using the severity categories determined by the U.S. Drought Monitor (USDM). This study uses the Standardized Precipitation Index (SPI) to conduct a drought frequency analysis across Texas, Oklahoma, and Kansas using PRISM precipitation data from 1900-2015. The SPI is shown to be spatiotemporally variant across the south-central United States. In particular, utilizing the default USDM severity thresholds may underestimate drought severity in arid regions. Objective drought thresholds were implemented by fitting a CDF to each location's SPI distribution. This approach results in a more homogeneous distribution of drought frequencies across each severity category. Results also indicate that it may be beneficial to develop objective drought thresholds for each season and SPI timescale. This research serves as a proof-of-concept and demonstrates how drought thresholds should be objectively developed so that they are appropriate for each climatic region.

Opposing Control by Transcription Factors MYB61 and MYB3 Increases Freezing Tolerance by Relieving C-Repeat Binding Factor Suppression1[OPEN

PubMed Central

Zhang, Yunqin; Miao, Zhenyan; Xie, Can; Meng, Xiangzhao; Deng, Jie; Mysore, Kirankumar S.; Frugier, Florian; Wang, Tao

2016-01-01

Cold acclimation is an important process by which plants respond to low temperature and enhance their winter hardiness. C-REPEAT BINDING FACTOR1 (CBF1), CBF2, and CBF3 genes were shown previously to participate in cold acclimation in Medicago truncatula. In addition, MtCBF4 is transcriptionally induced by salt, drought, and cold stresses. We show here that MtCBF4, shown previously to enhance drought and salt tolerance, also positively regulates cold acclimation and freezing tolerance. To identify molecular factors acting upstream and downstream of the MtCBF4 transcription factor (TF) in cold responses, we first identified genes that are differentially regulated upon MtCBF4 overexpression using RNAseq Digital Gene Expression Profiling. Among these, we showed that MtCBF4 directly activates the transcription of the COLD ACCLIMATION SPECIFIC15 (MtCAS15) gene. To gain insights into how MtCBF4 is transcriptionally regulated in response to cold, an R2R3-MYB TF, MtMYB3, was identified based on a yeast one-hybrid screen as binding directly to MYB cis-elements in the MtCBF4 promoter, leading to the inhibition of MtCBF4 expression. In addition, another MYB TF, MtMYB61, identified as an interactor of MtMYB3, can relieve the inhibitory effect of MtMYB3 on MtCBF4 transcription. This study, therefore, supports a model describing how MtCBF4 is regulated by antagonistic MtMYB3/MtMYB61 TFs, leading to the up-regulation of downstream targets such as MtCAS15 acting in cold acclimation in M. truncatula. PMID:27578551

Impacts of droughts on carbon sequestration by China's terrestrial ecosystems from 2000 to 2011

NASA Astrophysics Data System (ADS)

Liu, Y.; Zhou, Y.; Ju, W.; Wang, S.; Wu, X.; He, M.; Zhu, G.

2014-05-01

In recent years, China's terrestrial ecosystems have experienced frequent droughts. How these droughts have affected carbon sequestration by the terrestrial ecosystems is still unclear. In this study, the process-based Boreal Ecosystem Productivity Simulator (BEPS) model, driven by remotely sensed vegetation parameters, was employed to assess the effects of droughts on net ecosystem productivity (NEP) of terrestrial ecosystems in China from 2000 to 2011. Droughts of differing severity, as indicated by a standard precipitation index (SPI), hit terrestrial ecosystems in China extensively in 2001, 2006, 2009, and 2011. The national total annual NEP exhibited the slight decline of -11.3 Tg C yr-2 during the aforementioned years of extensive droughts. The NEP reduction ranged from 61.1 Tg C yr-1 to 168.8 Tg C yr-1. National and regional total NEP anomalies were correlated with the annual mean SPI, especially in Northwest China, North China, Central China, and Southwest China. The reductions in annual NEP in 2001 and 2011 might have been caused by a larger decrease in annual gross primary productivity (GPP) than in annual ecosystem respiration (ER). The reductions experienced in 2009 might be due to a decrease in annual GPP and an increase in annual ER, while reductions in 2006 could stem from a larger increase in ER than in GPP. The effects of droughts on NEP lagged up to 3-6 months, due to different responses of GPP and ER. In eastern China, where is humid and warm, droughts have predominant and short-term lagged influences on NEP. In western regions, cold and arid, the drought effects on NEP were relatively weaker but prone to lasting longer.

Identification of Reference Genes for Quantitative Real-Time PCR in Date Palm (Phoenix dactylifera L.) Subjected to Drought and Salinity.

PubMed

V Patankar, Himanshu; M Assaha, Dekoum V; Al-Yahyai, Rashid; Sunkar, Ramanjulu; Yaish, Mahmoud W

2016-01-01

Date palm is an important crop plant in the arid and semi-arid regions supporting human population in the Middle East and North Africa. These areas have been largely affected by drought and salinity due to insufficient rainfall and improper irrigation practices. Date palm is a relatively salt- and drought-tolerant plant and more recently efforts have been directed to identifying genes and pathways that confer stress tolerance in this species. Quantitative real-time PCR (qPCR) is a promising technique for the analysis of stress-induced differential gene expression, which involves the use of stable reference genes for normalizing gene expression. In an attempt to find the best reference genes for date palm's drought and salinity research, we evaluated the stability of 12 most commonly used reference genes using the geNorm, NormFinder, BestKeeper statistical algorithms and the comparative ΔCT method. The comprehensive results revealed that HEAT SHOCK PROTEIN (HSP), UBIQUITIN (UBQ) and YTH domain-containing family protein (YT521) were stable in drought-stressed leaves whereas GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (GAPDH), ACTIN and TUBULIN were stable in drought-stressed roots. On the other hand, SMALL SUBUNIT RIBOSOMAL RNA (25S), YT521 and 18S ribosomal RNA (18S); and UBQ, ACTIN and ELONGATION FACTOR 1-ALPHA (eEF1a) were stable in leaves and roots, respectively, under salt stress. The stability of these reference genes was verified by using the abiotic stress-responsive CYTOSOLIC Cu/Zn SUPEROXIDE DISMUTASE (Cyt-Cu/Zn SOD), an ABA RECEPTOR, and a PROLINE TRANSPORTER 2 (PRO) genes. A combination of top 2 or 3 stable reference genes were found to be suitable for normalization of the target gene expression and will facilitate gene expression analysis studies aimed at identifying functional genes associated with drought and salinity tolerance in date palm.

Drought in a human-modified world: reframing drought definitions, understanding, and analysis approaches

NASA Astrophysics Data System (ADS)

Van Loon, Anne F.; Stahl, Kerstin; Di Baldassarre, Giuliano; Clark, Julian; Rangecroft, Sally; Wanders, Niko; Gleeson, Tom; Van Dijk, Albert I. J. M.; Tallaksen, Lena M.; Hannaford, Jamie; Uijlenhoet, Remko; Teuling, Adriaan J.; Hannah, David M.; Sheffield, Justin; Svoboda, Mark; Verbeiren, Boud; Wagener, Thorsten; Van Lanen, Henny A. J.

2016-09-01

In the current human-modified world, or Anthropocene, the state of water stores and fluxes has become dependent on human as well as natural processes. Water deficits (or droughts) are the result of a complex interaction between meteorological anomalies, land surface processes, and human inflows, outflows, and storage changes. Our current inability to adequately analyse and manage drought in many places points to gaps in our understanding and to inadequate data and tools. The Anthropocene requires a new framework for drought definitions and research. Drought definitions need to be revisited to explicitly include human processes driving and modifying soil moisture drought and hydrological drought development. We give recommendations for robust drought definitions to clarify timescales of drought and prevent confusion with related terms such as water scarcity and overexploitation. Additionally, our understanding and analysis of drought need to move from single driver to multiple drivers and from uni-directional to multi-directional. We identify research gaps and propose analysis approaches on (1) drivers, (2) modifiers, (3) impacts, (4) feedbacks, and (5) changing the baseline of drought in the Anthropocene. The most pressing research questions are related to the attribution of drought to its causes, to linking drought impacts to drought characteristics, and to societal adaptation and responses to drought. Example questions include

• (i) What are the dominant drivers of drought in different parts of the world? (ii) How do human modifications of drought enhance or alleviate drought severity? (iii) How do impacts of drought depend on the physical characteristics of drought vs. the vulnerability of people or the environment? (iv) To what extent are physical and human drought processes coupled, and can feedback loops be identified and altered to lessen or mitigate drought? (v) How should we adapt our drought analysis to

• Winter drought impairs xylem phenology, anatomy and growth in Mediterranean Scots pine forests.

  PubMed

  Camarero, J J; Guada, G; Sánchez-Salguero, R; Cervantes, E

  2016-12-01

  Continental Mediterranean forests face drought but also cold spells and both climate extremes can impair the resilience capacity of these forests. Climate warming could amplify the negative effects of cold spells by inducing premature dehardening. Here we capitalize on a winter drought-induced dieback triggered by a cold spell which occurred in December 2001 affecting Scots pine forests in eastern Spain. We assessed post-dieback recovery by quantifying and comparing radial growth and xylem anatomy of non-declining (ND, crown cover >50%) and declining (D, crown cover ≤50%) trees in two sites (VP, Villarroya de los Pinares; TO, Torrijas). We also characterized xylogenesis in both sites and aboveground productivity in site VP. Dieback caused legacy effects since needle loss, a 60% reduction in litter fall and radial-growth decline characterized D-trees 3 years after dieback symptoms started appearing in spring 2002. D-trees formed collapsed tracheids in the 2002-ring, particularly in the most affected VP site where xylogenesis differences between ND and D trees were most noticeable. The lower growth rates of D-trees were caused by a shorter duration of their major xylogenesis phases. In site VP the radial-enlargement and wall-thickening of tracheids were significantly reduced in D-trees as compared to ND-trees because these xylogenesis phases tended to start earlier and end later in ND-trees. Gompertz models fitted to tracheid production predicted that maximum growth rates occurred 11-12 days earlier in ND than in D-trees. The formation of radially-enlarging tracheids was enhanced by longer days in both study sites and also by wetter conditions in the driest TO site, but xylogenesis sensitivity to climate was reduced in D-trees. Winter-drought dieback impairs xylem anatomy and phenology, aboveground productivity, xylogenesis and growth in Mediterranean Scots pine populations. Affected stands show a costly post-dieback recovery challenging their resilience ability

• Measurements and Modeling of Turbulent Fluxes during Persistent Cold Air Pool Events in Salt Lake Valley, Utah

  NASA Astrophysics Data System (ADS)

  Ivey, C. E.; Sun, X.; Holmes, H.

  2017-12-01

  Land surface processes are important in meteorology and climate research since they control the partitioning of surface energy and water exchange at the earth's surface. The surface layer is coupled to the planetary boundary layer (PBL) by surface fluxes, which serve as sinks or sources of energy, moisture, momentum, and atmospheric pollutants. Quantifying the surface heat and momentum fluxes at the land-atmosphere interface, especially for different surface land cover types, is important because they can further influence the atmospheric dynamics, vertical mixing, and transport processes that impact local, regional, and global climate. A cold air pool (CAP) forms when a topographic depression (i.e., valley) fills with cold air, where the air in the stagnant layer is colder than the air aloft. Insufficient surface heating, which is not able to sufficiently erode the temperature inversion that forms during the nighttime stable boundary layer, can lead to the formation of persistent CAPs during wintertime. These persistent CAPs can last for days, or even weeks, and are associated with increased air pollution concentrations. Thus, realistic simulations of the land-atmosphere exchange are meaningful to achieve improved predictions of the accumulation, transport, and dispersion of air pollution concentrations. The focus of this presentation is on observations and modeling results using turbulence data collected in Salt Lake Valley, Utah during the 2010-2011 wintertime Persistent Cold Air Pool Study (PCAPS). Turbulent fluxes and the surface energy balance over seven land use types are quantified. The urban site has an energy balance ratio (EBR) larger than one (1.276). Negative Bowen ratio (-0.070) is found at the cropland site. In addition to turbulence observations, half-hourly WRF simulated net radiation, latent heat, sensible heat, ground heat fluxes during one persistent CAP event are evaluated using the PCAPS observations. The results show that sensible and latent

• Mangrove expansion and salt marsh decline at mangrove poleward limits.

  PubMed

  Saintilan, Neil; Wilson, Nicholas C; Rogers, Kerrylee; Rajkaran, Anusha; Krauss, Ken W

  2014-01-01

  Mangroves are species of halophytic intertidal trees and shrubs derived from tropical genera and are likely delimited in latitudinal range by varying sensitivity to cold. There is now sufficient evidence that mangrove species have proliferated at or near their poleward limits on at least five continents over the past half century, at the expense of salt marsh. Avicennia is the most cold-tolerant genus worldwide, and is the subject of most of the observed changes. Avicennia germinans has extended in range along the USA Atlantic coast and expanded into salt marsh as a consequence of lower frost frequency and intensity in the southern USA. The genus has also expanded into salt marsh at its southern limit in Peru, and on the Pacific coast of Mexico. Mangroves of several species have expanded in extent and replaced salt marsh where protected within mangrove reserves in Guangdong Province, China. In south-eastern Australia, the expansion of Avicennia marina into salt marshes is now well documented, and Rhizophora stylosa has extended its range southward, while showing strong population growth within estuaries along its southern limits in northern New South Wales. Avicennia marina has extended its range southwards in South Africa. The changes are consistent with the poleward extension of temperature thresholds coincident with sea-level rise, although the specific mechanism of range extension might be complicated by limitations on dispersal or other factors. The shift from salt marsh to mangrove dominance on subtropical and temperate shorelines has important implications for ecological structure, function, and global change adaptation. © 2013 John Wiley & Sons Ltd.

• The Drought Task Force and Research on Understanding, Predicting, and Monitoring Drought

  NASA Astrophysics Data System (ADS)

  Barrie, D.; Mariotti, A.; Archambault, H. M.; Hoerling, M. P.; Wood, E. F.; Koster, R. D.; Svoboda, M.

  2016-12-01

  Drought has caused serious social and economic impacts throughout the history of the United States. All Americans are susceptible to the direct and indirect threats drought poses to the Nation. Drought challenges agricultural productivity and reduces the quantity and quality of drinking water supplies upon which communities and industries depend. Drought jeopardizes the integrity of critical infrastructure, causes extensive economic and health impacts, harms ecosystems, and increases energy costs. Ensuring the availability of clean, sufficient, and reliable water resources is a top national and NOAA priority. The Climate Program Office's Modeling, Analysis, Predictions, and Projections (MAPP) program, in partnership with the NOAA-led National Integrated Drought Information System (NIDIS), is focused on improving our understanding of drought causes, evolution, amelioration, and impacts as well as improving our capability to monitor and predict drought. These capabilities and knowledge are critical to providing communities with actionable, reliable information to increase drought preparedness and resilience. This poster will present information on the MAPP-organized Drought Task Force, a consortium of investigators funded by the MAPP program in partnership with NIDIS to advance drought understanding, monitoring, and prediction. Information on Task Force activities, products, and MAPP drought initiatives will be described in the poster, including the Task Force's ongoing focus on the California drought, its predictability, and its causes.

• Potassium Retention under Salt Stress Is Associated with Natural Variation in Salinity Tolerance among Arabidopsis Accessions

  PubMed Central

  Sun, Yanling; Kong, Xiangpei; Li, Cuiling; Liu, Yongxiu; Ding, Zhaojun

  2015-01-01

  Plants are exposed to various environmental stresses during their life cycle such as salt, drought and cold. Natural variation mediated plant growth adaptation has been employed as an effective approach in response to the diverse environmental cues such as salt stress. However, the molecular mechanism underlying this process is not well understood. In the present study, a collection of 82 Arabidopsis thaliana accessions (ecotypes) was screened with a view to identify variation for salinity tolerance. Seven accessions showed a higher level of tolerance than Col-0. The young seedlings of the tolerant accessions demonstrated a higher K+ content and a lower Na+/K+ ratio when exposed to salinity stress, but its Na+ content was the same as that of Col-0. The K+ transporter genes AtHAK5, AtCHX17 and AtKUP1 were up-regulated significantly in almost all the tolerant accessions, even in the absence of salinity stress. There was little genetic variation or positive transcriptional variation between the selections and Col-0 with respect to Na+-related transporter genes, as AtSOS genes, AtNHX1 and AtHKT1;1. In addition, under salinity stress, these selections accumulated higher compatible solutes and lower reactive oxygen species than did Col-0. Taken together, our results showed that natural variation in salinity tolerance of Arabidopsis seems to have been achieved by the strong capacity of K+ retention. PMID:25993093

• Divergent Regulation of CBF Regulon on Cold Tolerance and Plant Phenotype in Cassava Overexpressing Arabidopsis CBF3 Gene.

  PubMed

  An, Dong; Ma, Qiuxiang; Yan, Wei; Zhou, Wenzhi; Liu, Guanghua; Zhang, Peng

  2016-01-01

  Cassava is a tropical origin plant that is sensitive to chilling stress. In order to understand the CBF cold response pathway, a well-recognized regulatory mechanism in temperate plants, in cassava, overexpression of an Arabidopsis CBF3 gene is studied. This gene renders cassava increasingly tolerant to cold and drought stresses but is associated with retarded plant growth, leaf curling, reduced storage root yield, and reduced anthocyanin accumulation in a transcript abundance-dependent manner. Physiological analysis revealed that the transgenic cassava increased proline accumulation, reduced malondialdehyde production, and electrolyte leakage under cold stress. These transgenic lines also showed high relative water content when faced with drought. The expression of partial CBF-targeted genes in response to cold displayed temporal and spatial variations in the wild-type and transgenic plants: highly inducible in leaves and less altered in apical buds. In addition, anthocyanin accumulation was inhibited by downregulating the expression of genes involved in its biosynthesis and by interplaying between the CBF3 and the endogenous transcription factors. Thus, the heterologous CBF3 modulates the expression of stress-related genes and carries out a series of physiological adjustments under stressful conditions, showing a varied regulation pattern of CBF regulon from that of cassava CBFs.

Droughts in Georgia

USGS Publications Warehouse

Barber, Nancy L.; Stamey, Timothy C.

2000-01-01

Droughts do not have the immediate effects of floods, but sustained droughts can cause economic stress throughout the State. The word 'drought' has various meanings, depending on a person's perspective. To a farmer, a drought is a period of moisture deficiency that affects the crops under cultivation - even two weeks without rainfall can stress many crops during certain periods of the growing cycle. To a meteorologist, a drought is a prolonged period when precipitation is less than normal. To a water manager, a drought is a deficiency in water supply that affects water availability and water quality. To a hydrologist, a drought is an extended period of decreased precipitation and streamflow. Droughts in Georgia have severely affected municipal and industrial water supplies, agriculture, stream water quality, recreation at major reservoirs, hydropower generation, navigation, and forest resources. In Georgia, droughts have been documented at U.S. Geological Survey (USGS) streamflow gaging stations since the 1890's. From 1910 to 1940, about 20 streamflow gaging stations were in operation. Since the early 1950's through the late 1980's, about 100 streamflow gaging stations were in operation. Currently (2000), the USGS streamflow gaging network consists of more than 135 continuous-recording gages. Ground-water levels are currently monitored at 165 wells equipped with continuous recorders.

The RING Finger E3 Ligase SpRing is a Positive Regulator of Salt Stress Signaling in Salt-Tolerant Wild Tomato Species.

PubMed

Qi, Shilian; Lin, Qingfang; Zhu, Huishan; Gao, Fenghua; Zhang, Wenhao; Hua, Xuejun

2016-03-01

Protein ubiquitination in plants plays critical roles in many biological processes, including adaptation to abiotic stresses. Previously, RING finger E3 ligase has been characterized during salt stress response in several plant species, but little is known about its function in tomato. Here, we report that SpRing, a stress-inducible gene, is involved in salt stress signaling in wild tomato species Solanum pimpinellifolium 'PI365967'. In vitro ubiquitination assay revealed that SpRing is an E3 ubiquitin ligase and the RING finger conserved region is required for its activity. SpRing is expressed in all tissues of wild tomato and up-regulated by salt, drought and osmotic stresses, but repressed by low temperature. Green fluorescent protein (GFP) fusion analysis showed that SpRing is localized at the endoplasmic reticulum. Silencing of SpRing through a virus-induced gene silencing approach led to increased sensitivity to salt stress in wild tomato. Overexpression of SpRing in Arabidopsis thaliana resulted in enhanced salt tolerance during seed germination and early seedling development. The expression levels of certain key stress-related genes are altered both in SpRing-overexpressing Arabidopsis plants and virus-induced gene silenced tomato seedlings. Taken together, our results indicate that SpRing is involved in salt stress and functions as a positive regulator of salt tolerance. © The Author 2016. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Comparative proteome analysis of drought-sensitive and drought-tolerant rapeseed roots and their hybrid F1 line under drought stress.

PubMed

Mohammadi, Payam Pour; Moieni, Ahmad; Komatsu, Setsuko

2012-11-01

Rapeseed (Brassica napus L.), which is the third leading source of vegetable oil, is sensitive to drought stress during the early vegetative growth stage. To investigate the initial response of rapeseed to drought stress, changes in the protein expression profiles of drought-sensitive (RGS-003) and drought-tolerant lines (SLM-003), and their F1 hybrid, were analyzed using a proteomics approach. Seven-day-old rapeseed seedlings were treated with drought stress by restricting water for 7 days, and proteins were extracted from roots and separated by two-dimensional polyacrylamide gel electrophoresis. In the sensitive rapeseed line, 35 protein spots were differentially expressed under drought stress, and proteins related to metabolism, energy, disease/defense, and transport were decreased. In the tolerant line, 32 protein spots were differentially expressed under drought stress, and proteins involved in metabolism, disease/defense, and transport were increased, while energy-related proteins were decreased. Six protein spots in F1 hybrid were common among expressed proteins in the drought-sensitive and -tolerant lines. Notably, tubulin beta-2 and heat shock protein 70 were decreased in the drought-sensitive line and hybrid F1 plants, while jasmonate-inducible protein and 20S proteasome subunit PAF1 were increased in the F1 hybrids and drought-tolerant line. These results indicate that (1) V-type H(+) ATPase, plasma-membrane associated cation-binding protein, HSP 90, and elongation factor EF-2 have a role in the drought tolerance of rapeseed; (2) The decreased levels of heat shock protein 70 and tubulin beta-2 in the drought-sensitive and hybrid F1 lines might explain the reduced growth of these lines in drought conditions.

Insertion of a specific fungal 3'-phosphoadenosine-5'-phosphatase motif into a plant homologue improves halotolerance and drought tolerance of plants.

PubMed

Gašparič, Meti Buh; Lenassi, Metka; Gostinčar, Cene; Rotter, Ana; Plemenitaš, Ana; Gunde-Cimerman, Nina; Gruden, Kristina; Zel, Jana

2013-01-01

Soil salinity and drought are among the most serious agricultural and environmental problems of today. Therefore, investigations of plant resistance to abiotic stress have received a lot of attention in recent years. In this study, we identified the complete coding sequence of a 3'-phosphoadenosine-5'-phosphatase protein, ApHal2, from the halotolerant yeast Aureobasidium pullulans. Expression of the ApHAL2 gene in a Saccharomyces cerevisiae hal2 mutant complemented the mutant auxotrophy for methionine, and rescued the growth of the hal2 mutant in media with high NaCl concentrations. A 21-amino-acids-long region of the ApHal2 enzyme was inserted into the Arabidopsis thaliana homologue of Hal2, the SAL1 phosphatase. The inserted sequence included the META motif, which has previously been implicated in increased sodium tolerance of the Hal2 homologue from a related fungal species. Transgenic Arabidopsis plants overexpressing this modified SAL1 (mSAL1) showed improved halotolerance and drought tolerance. In a medium with an elevated salt concentration, mSAL1-expressing plants were twice as likely to have roots in a higher length category in comparison with the wild-type Arabidopsis and with plants overexpressing the native SAL1, and had 5% to 10% larger leaf surface area under moderate and severe salt stress, respectively. Similarly, after moderate drought exposure, the mSAL1-expressing plants showed 14% increased dry weight after revitalisation, with no increase in dry weight of the wild-type plants. With severe drought, plants overexpressing native SAL1 had the worst rehydration success, consistent with the recently proposed role of SAL1 in severe drought. This was not observed for plants expressing mSAL1. Therefore, the presence of this fungal META motif sequence is beneficial under conditions of increased salinity and moderate drought, and shows no drawbacks for plant survival under severe drought. This demonstrates that adaptations of extremotolerant fungi should

Linking meteorological drivers of spring-summer drought regimes to agricultural drought risk in China

NASA Astrophysics Data System (ADS)

Dai, L.; Wright, J. S.; Yu, C.; Huang, W. Y.

2017-12-01

As a drought prone country, China has experienced frequent severe droughts in recent decades. Drought frequency and severity are projected to increase in China under climate change. An understanding of the physical processes that contribute to extreme droughts is essential for seasonal forecasting, but the dominant physical mechanisms responsible for droughts in most parts of China are still unclear. Moreover, despite numerous studies on droughts in China, there are few clear connections between the meteorological and climatological drivers of extreme droughts and the associated agricultural consequences. This knowledge gap limits the capacity for decision-making support in drought management. The objectives of this study are (1) to identify robust spring-summer drought regimes over China, (2) to investigate the physical mechanisms associated with each regime, and (3) to better clarify connections between meteorological drought regimes and agricultural drought risk. First, we identify six drought regimes over China by applying an area-weighted k-means clustering technique to spatial patterns of spring-summer Standardized Precipitation Index (SPI) obtained from the ten-member ERA-20CM ensemble for 1900-2010. Second, we project these drought regimes onto agricultural drought risk maps for the three major cereal crops (rice, maize, and wheat) in China. Taking into account historical harvest areas for these crops, we then evaluate the potential impact of each drought regime on agricultural production. Third, the physical mechanisms and meteorological context behind each drought regimes are investigated based on monthly outputs from ERA20CM. We analyze the preceding and concurrent atmospheric circulation anomalies associated with each regime, and propose mechanistic explanations for drought development. This work provides a new perspective on diagnosing the physical mechanisms behind seasonal droughts, and lays a foundation for improving seasonal drought prediction and

Pulse-drought atop press-drought: unexpected plant responses and implications for dryland ecosystems.

PubMed

Hoover, David L; Duniway, Michael C; Belnap, Jayne

2015-12-01

In drylands, climate change is predicted to cause chronic reductions in water availability (press-droughts) through reduced precipitation and increased temperatures as well as increase the frequency and intensity of short-term extreme droughts (pulse-droughts). These changes in precipitation patterns may have profound ecosystem effects, depending on the sensitivities of the dominant plant functional types (PFTs). Here we present the responses of four Colorado Plateau PFTs to an experimentally imposed, 4-year, press-drought during which a natural pulse-drought occurred. Our objectives were to (1) identify the drought sensitivities of the PFTs, (2) assess the additive effects of the press- and pulse-drought, and (3) examine the interactive effects of soils and drought. Our results revealed that the C3 grasses were the most sensitive PFT to drought, the C3 shrubs were the most resistant, and the C4 grasses and shrubs had intermediate drought sensitivities. Although we expected the C3 grasses would have the greatest response to drought, the higher resistance of C3 shrubs relative to the C4 shrubs was contrary to our predictions based on the higher water use efficiency of C4 photosynthesis. Also, the additive effects of press- and pulse-droughts caused high morality in C3 grasses, which has large ecological and economic ramifications for this region. Furthermore, despite predictions based on the inverse texture hypothesis, we observed no interactive effects of soils with the drought treatment on cover or mortality. These results suggest that plant responses to droughts in drylands may differ from expectations and have large ecological effects if press- and pulse-droughts push species beyond physiological and mortality thresholds.

GRACE-Assimilated Drought Indicators for the U.S. Drought Monitor

NASA Technical Reports Server (NTRS)

Rui, Hualan; Vollmer, Bruce; Teng, Bill; Loeser, Carlee; Beaudoing, Hiroko; Rodell, Matt

2018-01-01

The Gravity Recovery and Climate Experiment (GRACE) mission detects changes in Earth's gravity field by precisely monitoring the changes in distance between two satellites orbiting the Earth in tandem. Scientists at NASA's Goddard Space Flight Center generate GRACE-assimilated groundwater and soil moisture drought indicators each week, for drought monitor-related studies and applications. The GRACE-assimilated Drought Indicator Version 2.0 data product (GRACE-DA-DM V2.0) is archived at, and distributed by, the NASA GES DISC (Goddard Earth Sciences Data and Information Services Center). More information about the data and data access is available on the data product landing page at https://disc.gsfc.nasa.gov/datasets /GRACEDADM_CLSM0125US_7D_2.0/summary. The GRACE-DA-DM V2.0 data product contains three drought indicators: Groundwater Percentile, Root Zone Soil Moisture Percentile, and Surface Soil Moisture Percentile. The drought indicators are of wet or dry conditions, expressed as a percentile, indicating the probability of occurrence within the period of record from 1948 to 2012. These GRACE-assimilated drought indicators, with improved spatial and temporal resolutions, should provide a more comprehensive and objective identification of drought conditions. This presentation describes the basic characteristics of the data and data services at NASA GES DISC and collaborative organizations, and uses a few examples to demonstrate the simple ways to explore the GRACE-assimilated drought indicator data.

Improved tolerance to post-anthesis drought stress by pre-drought priming at vegetative stages in drought-tolerant and -sensitive wheat cultivars.

PubMed

Abid, Muhammad; Tian, Zhongwei; Ata-Ul-Karim, Syed Tahir; Liu, Yang; Cui, Yakun; Zahoor, Rizwan; Jiang, Dong; Dai, Tingbo

2016-09-01

Wheat crop endures a considerable penalty of yield reduction to escape the drought events during post-anthesis period. Drought priming under a pre-drought stress can enhance the crop potential to tolerate the subsequent drought stress by triggering a faster and stronger defense mechanism. Towards these understandings, a set of controlled moderate drought stress at 55-60% field capacity (FC) was developed to prime the plants of two wheat cultivars namely Luhan-7 (drought tolerant) and Yangmai-16 (drought sensitive) during tillering (Feekes 2 stage) and jointing (Feekes 6 stage), respectively. The comparative response of primed and non-primed plants, cultivars and priming stages was evaluated by applying a subsequent severe drought stress at 7 days after anthesis. The results showed that primed plants of both cultivars showed higher potential to tolerate the post-anthesis drought stress through improved leaf water potential, more chlorophyll, and ribulose-1, 5-bisphosphate carboxylase/oxygenase contents, enhanced photosynthesis, better photoprotection and efficient enzymatic antioxidant system leading to less yield reductions. The primed plants of Luhan-7 showed higher capability to adapt the drought stress events than Yangmai-16. The positive effects of drought priming to sustain higher grain yield were pronounced in plants primed at tillering than those primed at jointing. In consequence, upregulated functioning of photosynthetic apparatus and efficient enzymatic antioxidant activities in primed plants indicated their superior potential to alleviate a subsequently occurring drought stress, which contributed to lower yield reductions than non-primed plants. However, genotypic and priming stages differences in response to drought stress also contributed to affect the capability of primed plants to tolerate the post-anthesis drought stress conditions in wheat. Copyright © 2016. Published by Elsevier Masson SAS.

Co-expression of NCED and ALO improves vitamin C level and tolerance to drought and chilling in transgenic tobacco and stylo plants.

PubMed

Bao, Gegen; Zhuo, Chunliu; Qian, Chunmei; Xiao, Ting; Guo, Zhenfei; Lu, Shaoyun

2016-01-01

Abscisic acid (ABA) regulates plant adaptive responses to various environmental stresses, while L-ascorbic acid (AsA) that is also named vitamin C is an important antioxidant and involves in plant stress tolerance and the immune system in domestic animals. Transgenic tobacco (Nicotiana tabacum L.) and stylo [Stylosanthes guianensis (Aublet) Swartz], a forage legume, plants co-expressing stylo 9-cis-epoxycarotenoid dioxygenase (SgNCED1) and yeast D-arabinono-1,4-lactone oxidase (ALO) genes were generated in this study, and tolerance to drought and chilling was analysed in comparison with transgenic tobacco overexpressing SgNCED1 or ALO and the wild-type plants. Compared to the SgNCED1 or ALO transgenic plants, in which only ABA or AsA levels were increased, both ABA and AsA levels were increased in transgenic tobacco and stylo plants co-expressing SgNCED1 and ALO genes. Compared to the wild type, an enhanced drought tolerance was observed in SgNCED1 transgenic tobacco plants with induced expression of drought-responsive genes, but not in ALO plants, while an enhanced chilling tolerance was observed in ALO transgenic tobaccos with induced expression of cold-responsive genes, but not in SgNCED1 plants. Co-expression of SgNCED1 and ALO genes resulted in elevated tolerance to both drought and chilling in transgenic tobacco and stylo plants with induced expression of both drought and cold-responsive genes. Our result suggests that co-expression of SgNCED1 and ALO genes is an effective way for use in forage plant improvement for increased tolerance to drought and chilling and nutrition quality. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Contrasting responses of shrubland carbon gain and soil carbon efflux to drought and warming across a European climate gradient

NASA Astrophysics Data System (ADS)

Reinsch, Sabine; Koller, Eva; Sowerby, Alwyn; de Dato, Giovanbattista; Estiarte, Marc; Guidolotti, Gabriele; Kovács-Láng, Edit; Kröel-Dulay, György; Lellei-Kovács, Eszter; Larsen, Klaus S.; Liberati, Dario; Penuelas, Josep; Ransijn, Johannes; Schmidt, Inger K.; Smith, Andrew R.; Tietema, Albert; Dukes, Jeffrey S.; Emmett, Bridget A.

2016-04-01

Understanding the relationship between above- and belowground processes is crucial if we are to forecast feedbacks between terrestrial carbon (C) dynamics and future climate. To test if climate-induced changes in annual aboveground net primary productivity (aNPP) will drive changes in C loss by soil respiration (Rs), we integrated data across a European temperature and precipitation gradient. For over a decade, six European shrublands were exposed to repeated drought (-30 % annual rain) during the plants' growth season or year-round night-time warming (+1.5 oC), using an identical experimental approach. As a result, drought reduced ecosystem C gain via aNPP by 0-25 % (compared to an untreated control) with the lowest C gain in warm-dry sites and highest in wet-cold sites (R2=0.078, p-value = 0.544, slope = 14.35 %). In contrast, drought induced C loss via Rs was of a lower magnitude (10-20 %) and was most pronounced in warm-dry sites compared to wet-cold sites (R2=0.687, p-value = 0.131, slope = 7.86 %). This suggests that belowground activity (microbes and roots) is stabilizing ecosystem processes and functions in terms of C storage. However, when the drought treatment permanently altered the soil structure at our hydric site, indicating we had exceeded the resilience of the system, the ecosystem C gain was no longer predictable from current (linear) relationships. Results from the warming treatment were generally of lower magnitude and of opposing direction compared to the drought treatment, indicating different mechanisms were driving ecosystem responses. Overall, our results suggest that aNPP is less sensitive than Rs to climate stresses and soil respiration C fluxes are not predictable from changes in plant productivity. Drought and warming effects on aNPP and Rs did not weaken over decadal timescales at larger, continental scales if no catastrophic threshold is passed. However, indirect effects of climate change on soil properties and/or microbial communities

Pulse-drought atop press-drought: unexpected plant responses and implications for dryland ecosystems

USGS Publications Warehouse

Hoover, David L.; Duniway, Michael C.; Belnap, Jayne

2015-01-01

In drylands, climate change is predicted to cause chronic reductions in water availability (press-droughts) through reduced precipitation and increased temperatures as well as increase the frequency and intensity of short-term extreme droughts (pulse-droughts). These changes in precipitation patterns may have profound ecosystem effects, depending on the sensitivities of the dominant plant functional types (PFTs). Here we present the responses of four Colorado Plateau PFTs to an experimentally imposed, 4-year, press-drought during which a natural pulse-drought occurred. Our objectives were to (1) identify the drought sensitivities of the PFTs, (2) assess the additive effects of the press- and pulse-drought, and (3) examine the interactive effects of soils and drought. Our results revealed that the C3 grasses were the most sensitive PFT to drought, the C3shrubs were the most resistant, and the C4 grasses and shrubs had intermediate drought sensitivities. Although we expected the C3 grasses would have the greatest response to drought, the higher resistance of C3 shrubs relative to the C4 shrubs was contrary to our predictions based on the higher water use efficiency of C4 photosynthesis. Also, the additive effects of press- and pulse-droughts caused high morality in C3 grasses, which has large ecological and economic ramifications for this region. Furthermore, despite predictions based on the inverse texture hypothesis, we observed no interactive effects of soils with the drought treatment on cover or mortality. These results suggest that plant responses to droughts in drylands may differ from expectations and have large ecological effects if press- and pulse-droughts push species beyond physiological and mortality thresholds.

CreativeDrought: An interdisciplinary approach to building resilience to drought

NASA Astrophysics Data System (ADS)

Rangecroft, Sally; Van Loon, Anne; Rohse, Melanie; Day, Rosie; Birkinshaw, Stephen; Makaya, Eugine

2017-04-01

Drought events cause severe water and food insecurities in many developing countries where resilience to natural hazards and change is low due to a number of reasons (including poverty, social and political inequality, and limited access to information). Furthermore, with climate change and increasing pressures from population and societal change, populations are expected to experience future droughts outside of their historic range. Integrated water resources management is an established tool combining natural science, engineering and management to help address drought and associated impacts. However, it often lacks a strong social and cultural aspect, leading to poor implementation on the ground. For a more holistic approach to building resilience to future drought, a stronger interdisciplinary approach is required which can incorporate the local cultural context and perspectives into drought and water management, and communicate information effectively to communities. In this pilot project 'CreativeDrought', we use a novel interdisciplinary approach aimed at building resilience to future drought in rural Africa by combining hydrological modelling with rich local information and engaging communicative approaches from social sciences. The work is conducted through a series of steps in which we i) engage with local rural communities to collect narratives on drought experiences; ii) generate hydrological modelling scenarios based on IPCC projections, existing data and the collected narratives; iii) feed these back to the local community to gather their responses to these scenarios; iv) iteratively adapt them to obtain hypothetical future drought scenarios; v) engage the community with the scenarios to formulate new future drought narratives; and vi) use this new data to enhance local water resource management. Here we present some of the indigenous knowledge gathered through narratives and the hydrological modelling scenarios for a rural community in Southern Africa

Genotypes Associated with Listeria monocytogenes Isolates Displaying Impaired or Enhanced Tolerances to Cold, Salt, Acid, or Desiccation Stress

PubMed Central

Hingston, Patricia; Chen, Jessica; Dhillon, Bhavjinder K.; Laing, Chad; Bertelli, Claire; Gannon, Victor; Tasara, Taurai; Allen, Kevin; Brinkman, Fiona S. L.; Truelstrup Hansen, Lisbeth; Wang, Siyun

2017-01-01

The human pathogen Listeria monocytogenes is a large concern in the food industry where its continuous detection in food products has caused a string of recalls in North America and Europe. Most recognized for its ability to grow in foods during refrigerated storage, L. monocytogenes can also tolerate several other food-related stresses with some strains possessing higher levels of tolerances than others. The objective of this study was to use a combination of phenotypic analyses and whole genome sequencing to elucidate potential relationships between L. monocytogenes genotypes and food-related stress tolerance phenotypes. To accomplish this, 166 L. monocytogenes isolates were sequenced and evaluated for their ability to grow in cold (4°C), salt (6% NaCl, 25°C), and acid (pH 5, 25°C) stress conditions as well as survive desiccation (33% RH, 20°C). The results revealed that the stress tolerance of L. monocytogenes is associated with serotype, clonal complex (CC), full length inlA profiles, and the presence of a plasmid which was identified in 55% of isolates. Isolates with full length inlA exhibited significantly (p < 0.001) enhanced cold tolerance relative to those harboring a premature stop codon (PMSC) in this gene. Similarly, isolates possessing a plasmid demonstrated significantly (p = 0.013) enhanced acid tolerance. We also identified nine new L. monocytogenes sequence types, a new inlA PMSC, and several connections between CCs and the presence/absence or variations of specific genetic elements. A whole genome single-nucleotide-variants phylogeny revealed sporadic distribution of tolerant isolates and closely related sensitive and tolerant isolates, highlighting that minor genetic differences can influence the stress tolerance of L. monocytogenes. Specifically, a number of cold and desiccation sensitive isolates contained PMSCs in σB regulator genes (rsbS, rsbU, rsbV). Collectively, the results suggest that knowing the sequence type of an isolate in

Excreting and non-excreting grasses exhibit different salt resistance strategies

PubMed Central

Moinuddin, Muhammad; Gulzar, Salman; Ahmed, Muhammad Zaheer; Gul, Bilquees; Koyro, Hans-Werner; Khan, Muhammad Ajmal

2014-01-01

The combination of traits that makes a plant successful under saline conditions varies with the type of plant and its interaction with the environmental conditions. Knowledge about the contribution of these traits towards salt resistance in grasses has great potential for improving the salt resistance of conventional crops. We attempted to identify differential adaptive response patterns of salt-excreting versus non-excreting grasses. More specifically, we studied the growth, osmotic, ionic and nutrient (carbon/nitrogen) relations of two salt-excreting (Aeluropus lagopoides and Sporobolus tremulus) and two non-excreting (Paspalum paspalodes and Paspalidium geminatum) perennial C4 grasses under non-saline and saline (0, 200 and 400 mM NaCl) conditions. Growth and relative growth rate decreased under saline conditions in the order P. geminatum > S. tremulus = A. lagopoides > P. paspalodes. The root-to-shoot biomass allocation was unaffected in salt-excreting grasses, increased in P. paspalodes but decreased in P. geminatum. Salt-excreting grasses had a higher shoot/root Na+ ratio than non-excreting grasses. K+, Ca2+ and Mg2+ homoeostasis remained undisturbed among test grasses possibly through improved ion selectivity with rising substrate salinity. Salt-excreting grasses increased leaf succulence, decreased ψs and xylem pressure potential, and accumulated proline and glycinebetaine with increasing salinity. Higher salt resistance of P. paspalodes could be attributed to lower Na+ uptake, higher nitrogen-use efficiency and higher water-use efficiency among the test species. However, P. geminatum was unable to cope with salt-induced physiological drought. More information is required to adequately document the differential strategies of salt resistance in salt-excreting and non-excreting grasses. PMID:24996428

Drought stress obliterates the preference for ammonium as an N source in the C4 plant Spartina alterniflora.

PubMed

Hessini, Kamel; Kronzucker, Herbert J; Abdelly, Chedly; Cruz, Cristina

2017-06-01

The C 4 grass Spartina alterniflora is known for its unique salt tolerance and strong preference for ammonium (NH 4 + ) as a nitrogen (N) source. We here examined whether Spartina's unique preference for NH 4 + results in improved performance under drought stress. Manipulative greenhouse experiments were carried out to measure the effects of variable water availability and inorganic N sources on plant performance (growth, photosynthesis, antioxidant, and N metabolism). Drought strongly reduced leaf number and area, plant fresh and dry weight, and photosynthetic activity on all N sources, but the reduction was most pronounced on NH 4 + . Indeed, the growth advantage seen on NH 4 + in the absence of drought, producing nearly double the biomass compared to growth on NO 3 - , was entirely obliterated under both intermediate and severe drought conditions (50 and 25% field capacity, respectively). Both fresh and dry weight became indistinguishable among N sources under drought. Major markers of the antioxidant capacity of the plant, the activities of the enzymes superoxide dismutase, catalase, ascorbate peroxidase, and glutathione reductase, showed higher constitutive levels on NH 4 + . Catalase and glutathione reductase were specifically upregulated in NH 4 + -fed plants with increasing drought stress. This upregulation, however, failed to protect the plants from drought stress. Nitrogen metabolism was characterized by lower constitutive levels of glutamine synthetase in NH 4 + -fed plants, and a rise in glutamate dehydrogenase (GDH) activity under drought, accompanied by elevated proline levels in leaves. Our results support postulates on the important role of GDH induction, and its involvement in the synthesis of compatible solutes, under abiotic stress. We show that, despite this metabolic shift, S. alterniflora's sensitivity to drought does not benefit from growth on NH 4 + and that the imposition of drought stress equalizes all N-source-related growth differences

The current California drought through EDDI's eyes: early warning and monitoring of agricultural and hydrologic drought with the new Evaporative Demand Drought Index.

NASA Astrophysics Data System (ADS)

Hobbins, M.; McEvoy, D.; Huntington, J. L.; Wood, A. W.; Morton, C.; Verdin, J. P.

2015-12-01

We have developed a physically based, multi-scalar drought index—the Evaporative Demand Drought Index (EDDI)—to improve treatment of evaporative dynamics in drought monitoring. Existing popular drought indices—such as the Palmer Drought Severity Index that informs much of the US Drought Monitor (USDM)—have primarily relyied on precipitation and temperature (T) to represent hydroclimatic anomalies, leaving evaporative demand (E0) most often derived from poorly performing T-based parameterizations then used to derive actual evapotranspiration (ET) from LSMs. Instead, EDDI leverages the inter-relations of E0 and ET, measuring E0's physical response to surface drying anomalies due to two distinct land surface/atmosphere interactions: (i) in sustained drought, limited moisture availability forces E0 and ET into a complementary relation, whereby ET declines as E0 increases; and (ii) in "flash" droughts, E0 increases due to increasing advection or radiation. E0's rise in response to both drought types suggests EDDI's robustness as a monitor and leading indicator of drought. To drive EDDI, we use for E0 daily reference ET from the ASCE Standardized Reference ET equation forced by North American Land Data Assimilation System drivers. EDDI is derived by aggregating E0 anomalies from its long-term mean across a period of interest and normalizing them to a Z-score. Positive EDDI indicates drier than normal conditions (and so drought). We use the current historic California drought as a test-case in which to examine EDDI's performance in monitoring agricultural and hydrologic drought. We observe drought development and decompose the behavior of drought's evaporative drivers during in-drought intensification periods and wetting events. EDDI's performance as a drought leading indicator with respect to the USDM is tested in important agricultural regions. Comparing streamflow from several USGS gauges in the Sierra Nevada to EDDI, we find that EDDI tracks most major

Massive mortality of aspen following severe drought along the southern edge of the Canadian boreal forest

PubMed Central

Michaelian, Michael; Hogg, Edward H; Hall, Ronald J; Arsenault, Eric

2011-01-01

Drought-induced, regional-scale dieback of forests has emerged as a global concern that is expected to escalate under model projections of climate change. Since 2000, drought of unusual severity, extent, and duration has affected large areas of western North America, leading to regional-scale dieback of forests in the southwestern US. We report on drought impacts on forests in a region farther north, encompassing the transition between boreal forest and prairie in western Canada. A central question is the significance of drought as an agent of large-scale tree mortality and its potential future impact on carbon cycling in this cold region. We used a combination of plot-based, meteorological, and remote sensing measures to map and quantify aboveground, dead biomass of trembling aspen (Populus tremuloides Michx.) across an 11.5 Mha survey area where drought was exceptionally severe during 2001–2002. Within this area, a satellite-based land cover map showed that aspen-dominated broadleaf forests occupied 2.3 Mha. Aerial surveys revealed extensive patches of severe mortality (>55%) resembling the impacts of fire. Dead aboveground biomass was estimated at 45 Mt, representing 20% of the total aboveground biomass, based on a spatial interpolation of plot-based measurements. Spatial variation in percentage dead biomass showed a moderately strong correlation with drought severity. In the prairie-like, southern half of the study area where the drought was most severe, 35% of aspen biomass was dead, compared with an estimated 7% dead biomass in the absence of drought. Drought led to an estimated 29 Mt increase in dead biomass across the survey area, corresponding to 14 Mt of potential future carbon emissions following decomposition. Many recent, comparable episodes of drought-induced forest dieback have been reported from around the world, which points to an emerging need for multiscale monitoring approaches to quantify drought effects on woody biomass and carbon cycling

Modeling drought impact occurrence based on climatological drought indices for four European countries

NASA Astrophysics Data System (ADS)

Stagge, James H.; Kohn, Irene; Tallaksen, Lena M.; Stahl, Kerstin

2014-05-01

The relationship between atmospheric conditions and the likelihood of a significant drought impact has, in the past, been difficult to quantify, particularly in Europe where political boundaries and language have made acquiring comprehensive drought impact information difficult. As such, the majority of studies linking meteorological drought with the occurrence or severity of drought impacts have previously focused on specific regions, very detailed impact types, or both. This study describes a new methodology to link the likelihood of drought impact occurrence with climatological drought indices across different European climatic regions and impact sectors using the newly developed European Drought Impact report Inventory (EDII), a collaborative database of drought impact information (www.geo.uio.no/edc/droughtdb/). The Standardized Precipitation Index (SPI) and Standardized Precipitation-Evapotranspiration Index (SPEI) are used as predictor variables to quantify meteorological drought severity over prior time periods (here 1, 2, 3, 6, 9, 12, and 24 months are used). The indices are derived using the gridded WATCH Forcing Datasets, covering the period 1958-2012. Analysis was performed using logistic regression to identify the climatological drought index and accumulation period, or linear combination of drought indices, that best predicts the likelihood of a documented drought impact, defined by monthly presence/absence. The analysis was carried out for a subset of four European countries (Germany, UK, Norway, Slovenia) and four of the best documented impact sectors: Public Water Supply, Agriculture and Livestock Farming, Energy and Industry, and Environmental Quality. Preliminary results show that drought impacts in these countries occur most frequently due to a combination of short-term (2-6 month) precipitation deficits and long-term (12-24 month) potential evapotranspiration anomaly, likely associated with increased temperatures. Agricultural drought impacts

Induced over-expression of AtDREB2A CA improves drought tolerance in sugarcane.

PubMed

Reis, Rafaela Ribeiro; da Cunha, Bárbara Andrade Dias Brito; Martins, Polyana Kelly; Martins, Maria Thereza Bazzo; Alekcevetch, Jean Carlos; Chalfun, Antônio; Andrade, Alan Carvalho; Ribeiro, Ana Paula; Qin, Feng; Mizoi, Junya; Yamaguchi-Shinozaki, Kazuko; Nakashima, Kazuo; Carvalho, Josirley de Fátima Corrêa; de Sousa, Carlos Antônio Ferreira; Nepomuceno, Alexandre Lima; Kobayashi, Adilson Kenji; Molinari, Hugo Bruno Correa

2014-05-01

Drought is one of the most challenging agricultural issues limiting sustainable sugarcane production and, in some cases, yield losses caused by drought are nearly 50%. DREB proteins play vital regulatory roles in abiotic stress responses in plants. The transcription factor DREB2A interacts with a cis-acting DRE sequence to activate the expression of downstream genes that are involved in drought-, salt- and heat-stress response in Arabidopsis thaliana. In the present study, we evaluated the effects of stress-inducible over-expression of AtDREB2A CA on gene expression, leaf water potential (ΨL), relative water content (RWC), sucrose content and gas exchanges of sugarcane plants submitted to a four-days water deficit treatment in a rhizotron-grown root system. The plants were also phenotyped by scanning the roots and measuring morphological parameters of the shoot. The stress-inducible expression of AtDREB2A CA in transgenic sugarcane led to the up-regulation of genes involved in plant response to drought stress. The transgenic plants maintained higher RWC and ΨL over 4 days after withholding water and had higher photosynthetic rates until the 3rd day of water-deficit. Induced expression of AtDREB2A CA in sugarcane increased sucrose levels and improved bud sprouting of the transgenic plants. Our results indicate that induced expression of AtDREB2A CA in sugarcane enhanced its drought tolerance without biomass penalty. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

Tolerance to multiple climate stressors: a case study of Douglas-fir drought and cold hardiness

Treesearch

Sheel Bansal; Connie Harrington; Brad St. Clair

2016-01-01

1. Drought and freeze events are two of the most common forms of climate extremes which result in tree damage or death, and the frequency and intensity of both stressors may increase with climate change. Few studies have examined natural covariation in stress tolerance traits to cope with multiple stressors among wild plant populations. 2. We assessed the...

Modeling Drought Impact Occurrence Based on Climatological Drought Indices for Europe

NASA Astrophysics Data System (ADS)

Stagge, J. H.; Kohn, I.; Tallaksen, L. M.; Stahl, K.

2014-12-01

Meteorological drought indices are often assumed to accurately characterize the severity of a drought event; however, these indices do not necessarily reflect the likelihood or severity of a particular type of drought impact experienced on the ground. In previous research, this link between index and impact was often estimated based on thresholds found by experience, measured using composite indices with assumed weighting schemes, or defined based on very narrow impact measures, using either a narrow spatial extent or very specific impacts. This study expands on earlier work by demonstrating the feasibility of relating user-provided impact reports to the climatological drought indices SPI and SPEI by logistic regression. The user-provided drought impact reports are based on the European Drought Impact Inventory (EDII, www.geo.uio.no/edc/droughtdb/), a newly developed online database that allows both public report submission and querying the more than 4,000 reported impacts spanning 33 European countries. This new tool is used to quantify the link between meteorological drought indices and impacts focusing on four primary impact types, spanning agriculture, energy and industry, public water supply, and freshwater ecosystem across five European countries. Statistically significant climate indices are retained as predictors using step-wise regression and used to compare the most relevant drought indices and accumulation periods for different impact types and regions. Agricultural impacts are explained best by 2-12 month anomalies, with 2-3 month anomalies found in predominantly rain-fed agricultural regions, and anomalies greater than 3 months related to agricultural management practices. Energy and industry impacts, related to hydropower and energy cooling water in these countries, respond to longer accumulated precipitation anomalies (6-12 months). Public water supply and freshwater ecosystem impacts are explained by a more complex combination of short (1-3 month

Wheat TaSP gene improves salt tolerance in transgenic Arabidopsis thaliana.

PubMed

Ma, Xiaoli; Cui, Weina; Liang, Wenji; Huang, Zhanjing

2015-12-01

A novel salt-induced gene with unknown functions was cloned through analysis of gene expression profile of a salt-tolerant wheat mutant RH8706-49 under salt stress. The gene was named Triticum aestivum salt-related protein (TaSP) and deposited in GenBank (Accession No. KF307326). Quantitative polymerase chain reaction (qPCR) results showed that TaSP expression was induced under salt, abscisic acid (ABA), and polyethylene glycol (PEG) stresses. Subcellular localization revealed that TaSP was mainly localized in cell membrane. Overexpression of TaSP in Arabidopsis could improve salt tolerance of 35S::TaSP transgenic Arabidopsis. 35S::TaSP transgenic Arabidopsis lines after salt stress presented better physiological indexes than the control group. In the non-invasive micro-test (NMT), an evident Na(+) excretion was observed at the root tip of salt-stressed 35S::TaSP transgenic Arabidopsis. TaSP promoter was cloned, and its beta-glucuronidase (GUS) activities before and after ABA, salt, cold, heat, and salicylic acid (SA) stresses were determined. Full-length TaSP promoter contained ABA and salt response elements. Copyright © 2015 Elsevier Masson SAS. All rights reserved.

Genome-wide gene phylogeny of CIPK family in cassava and expression analysis of partial drought-induced genes

PubMed Central

Hu, Wei; Xia, Zhiqiang; Yan, Yan; Ding, Zehong; Tie, Weiwei; Wang, Lianzhe; Zou, Meiling; Wei, Yunxie; Lu, Cheng; Hou, Xiaowan; Wang, Wenquan; Peng, Ming

2015-01-01

Cassava is an important food and potential biofuel crop that is tolerant to multiple abiotic stressors. The mechanisms underlying these tolerances are currently less known. CBL-interacting protein kinases (CIPKs) have been shown to play crucial roles in plant developmental processes, hormone signaling transduction, and in the response to abiotic stress. However, no data is currently available about the CPK family in cassava. In this study, a total of 25 CIPK genes were identified from cassava genome based on our previous genome sequencing data. Phylogenetic analysis suggested that 25 MeCIPKs could be classified into four subfamilies, which was supported by exon-intron organizations and the architectures of conserved protein motifs. Transcriptomic analysis of a wild subspecies and two cultivated varieties showed that most MeCIPKs had different expression patterns between wild subspecies and cultivatars in different tissues or in response to drought stress. Some orthologous genes involved in CIPK interaction networks were identified between Arabidopsis and cassava. The interaction networks and co-expression patterns of these orthologous genes revealed that the crucial pathways controlled by CIPK networks may be involved in the differential response to drought stress in different accessions of cassava. Nine MeCIPK genes were selected to investigate their transcriptional response to various stimuli and the results showed the comprehensive response of the tested MeCIPK genes to osmotic, salt, cold, oxidative stressors, and ABA signaling. The identification and expression analysis of CIPK family suggested that CIPK genes are important components of development and multiple signal transduction pathways in cassava. The findings of this study will help lay a foundation for the functional characterization of the CIPK gene family and provide an improved understanding of abiotic stress responses and signaling transduction in cassava. PMID:26579161

GmWRKY53, a water- and salt-inducible soybean gene for rapid dissection of regulatory elements in BY-2 cell culture

PubMed Central

Tripathi, Prateek; Rabara, Roel C.; Lin, Jun; Rushton, Paul J.

2013-01-01

Drought is the major cause of crop losses worldwide. Water stress-inducible promoters are important for understanding the mechanisms of water stress responses in crop plants. Here we utilized tobacco (Nicotiana tabacum L.) Bright Yellow 2 (BY-2) cell system in presence of polyethylene glycol, salt and phytohormones. Extension of the system to 85 mM NaCl led to inducibility of up to 10-fold with the water stress and salt responsive soybean GmWRKY53 promoter. Upon ABA and JA treatment fold inducibility was up to 5-fold and 14-fold, respectively. Thus, we hypothesize that GmWRKY53 could be used as potential model candidate for dissecting drought regulatory elements as well as understanding crosstalk utilizing a rapid heterologous system of BY-2 culture. PMID:23511199

Remote Sensing of Drought: Progress and Opportunities for Improving Drought Monitoring and Prediction

NASA Astrophysics Data System (ADS)

AghaKouchak, A.; Huning, L. S.; Love, C. A.; Farahmand, A.

2017-12-01

This presentation surveys current and emerging drought monitoring approaches using satellite remote sensing observations from climatological and ecosystem perspectives. Satellite observations that are not currently used for operational drought monitoring, such as near-surface air relative humidity and water vapor, provide opportunities to improve early drought warning. Current and future satellite missions offer opportunities to develop composite and multi-indicator drought models. This presentation describes how different satellite observations can be combined for overall drought development and impact assessment. Finally, we provide an overview of the research gaps and challenges that are facing us ahead in the remote sensing of drought.

Global patterns of drought recovery

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schwalm, Christopher R.; Anderegg, William R. L.; Michalak, Anna M.

Drought is a recurring multi-factor phenomenon with major impacts on natural and human systems1-3. Drought is especially important for land carbon sink variability, influencing climate regulation of the terrestrial biosphere4. While 20th Century trends in drought regime are ambiguous, “more extreme extremes” as well as more frequent and severe droughts3,7 are expected in the 21st Century. Recovery time, the length of time an ecosystem requires to revert to its pre-drought functional state, is a critical metric of drought impact. Yet the spatiotemporal patterning and controls of drought recovery are largely unknown. Here we use three distinct global datasets of grossmore » primary productivity to show that across diverse terrestrial ecosystems drought recovery times are driven by biological productivity and biodiversity, with drought length and severity of secondary importance. Recovery time, especially for extreme droughts, and the areal extent of ecosystems in recovery from drought generally increase over the 20th Century, supporting an increase globally in drought impact8. Our results indicate that if future Anthropocene droughts become more widespread as expected, that droughts will become more frequent relative to recovery time. This increases the risk of entering a new regime where vegetation never recovers to its original state and widespread degradation of the land carbon sink ensues.« less

Leaf conductance and carbon gain under salt-stressed conditions

NASA Astrophysics Data System (ADS)

Volpe, V.; Manzoni, S.; Marani, M.; Katul, G.

2011-12-01

Exposure of plants to salt stress is often accompanied by reductions in leaf photosynthesis and in stomatal and mesophyll conductances. To separate the effects of salt stress on these quantities, a model based on the hypothesis that carbon gain is maximized subject to a water loss cost is proposed. The optimization problem of adjusting stomatal aperture for maximizing carbon gain at a given water loss is solved for both a non-linear and a linear biochemical demand function. A key novel theoretical outcome of the optimality hypothesis is an explicit relationship between the stomatal and mesophyll conductances that can be evaluated against published measurements. The approaches here successfully describe gas-exchange measurements reported for olive trees (Olea europea L.) and spinach (Spinacia oleraceaL.) in fresh water and in salt-stressed conditions. Salt stress affected both stomatal and mesophyll conductances and photosynthetic efficiency of both species. The fresh water/salt water comparisons show that the photosynthetic capacity is directly reduced by 30%-40%, indicating that reductions in photosynthetic rates under increased salt stress are not due only to a limitation of CO2diffusion. An increase in salt stress causes an increase in the cost of water parameter (or marginal water use efficiency) exceeding 100%, analogous in magnitude to findings from extreme drought stress studies. The proposed leaf-level approach can be incorporated into physically based models of the soil-plant-atmosphere system to assess how saline conditions and elevated atmospheric CO2 jointly impact transpiration and photosynthesis.

Future Drought Projections over the Iberian Peninsula using Drought Indices

NASA Astrophysics Data System (ADS)

Garcia-Valdecasas Ojeda, M.; Yeste Donaire, P.; Góngora García, T. M.; Gámiz-Fortis, S. R.; Castro-Diez, Y.; Esteban-Parra, M. J.

2017-12-01

Currently, drought events are the cause of numerous annual economic losses. In a context of climate change, it is expected an increase in the severity and the frequency of drought occurrences, especially in areas such as the Mediterranean region. This study makes use of two drought indices in order to analyze the potential changes on future drought events and their effects at different time scales over a vulnerable region, the Iberian Peninsula. The indices selected were the Standardized Precipitation Evapotranspiration Index (SPEI), which takes into account the global warming through the temperature, and the Standardized Precipitation Index (SPI), based solely on precipitation data, at a spatial resolution of 0.088º ( 10 km). For their computation, current (1980-2014) and future (2021-2050 and 2071-2100) high resolution simulations were carried out using the Weather Research and Forecasting (WRF) model over a domain centered in the Iberian Peninsula, and nested in the 0.44 EUROCORDEX region. WRF simulations were driven by two different global bias-corrected climate models: the version 1 of NCAR's Community Earth System Model (CESM1) and the Max Planck Institute's Earth System Model (MPI-ESM-LR), and under two different Representative Concentration Pathway (RCP) scenarios: RCP 4.5 and RCP 8.5. Future projections were analyzed regarding to changes in mean, median and variance of drought indices with respect to the historical distribution, as well as changes in the frequency and duration of moderate and severe drought events. In general, results suggest an increase in frequency and severity of drought, especially for 2071-2100 period in the RCP 8.5 scenario. Results also shown an increase of drought phenomena more evident using the SPEI. Conclusions from this study could provide a valuable contribution to the understanding of how the increase of the temperature would affect the drought variability in the Mediterranean regions which is necessary for a suitable

Application of effective drought index for quantification of meteorological drought events: a case study in Australia

NASA Astrophysics Data System (ADS)

Deo, Ravinesh C.; Byun, Hi-Ryong; Adamowski, Jan F.; Begum, Khaleda

2017-04-01

Drought indices (DIs) that quantify drought events by their onset, termination, and subsequent properties such as the severity, duration, and peak intensity are practical stratagems for monitoring and evaluating the impacts of drought. In this study, the effective drought index (EDI) calculated over daily timescales was utilized to quantify short-term (dry spells) and ongoing drought events using drought monitoring data in Australia. EDI was an intensive DI that considered daily water accumulation with a weighting function applied to daily rainfall data with the passage of time. A statistical analysis of the distribution of water deficit period relative to the base period was performed where a run-sum method was adopted to identify drought onset for any day ( i) with EDI i < 0 (rainfall below normal). Drought properties were enumerated in terms of (1) severity (AEDI ≡ accumulated sum of EDIi < 0), (2) duration (DS ≡ cumulative number of days with EDIi < 0), (3) peak intensity (EDImin ≡ minimum EDI of a drought event), (4) annual drought severity (YAEDI ≡ yearly accumulated negative EDI), and (5) accumulated severity of ongoing drought using event-accumulated EDI (EAEDI). The analysis of EDI signal enabled the detection and quantification of a number of drought events in Australia: Federation Drought (1897-1903), 1911-1916 Drought, 1925-1929 Drought, World War II Drought (1937-1945), and Millennium Drought (2002-2010). In comparison with the other droughts, Millennium Drought was exemplified as an unprecedented dry period especially in Victoria (EAEDI ≈ -4243, DS = 1946 days, EDImin = -4.05, and YAEDI = -4903). For the weather station tested in Northern Territory, the worst drought was recorded during 1925-1929 period. The results justified the suitability of effective drought index as a useful scientific tool for monitoring of drought progression, onset and termination, and ranking of drought based on severity, duration, and peak intensity, which allows

Toward a categorical drought prediction system based on U.S. Drought Monitor (USDM) and climate forecast

NASA Astrophysics Data System (ADS)

Hao, Zengchao; Xia, Youlong; Luo, Lifeng; Singh, Vijay P.; Ouyang, Wei; Hao, Fanghua

2017-08-01

Disastrous impacts of recent drought events around the world have led to extensive efforts in drought monitoring and prediction. Various drought information systems have been developed with different indicators to provide early drought warning. The climate forecast from North American Multimodel Ensemble (NMME) has been among the most salient progress in climate prediction and its application for drought prediction has been considerably growing. Since its development in 1999, the U.S. Drought Monitor (USDM) has played a critical role in drought monitoring with different drought categories to characterize drought severity, which has been employed to aid decision making by a wealth of users such as natural resource managers and authorities. Due to wide applications of USDM, the development of drought prediction with USDM drought categories would greatly aid decision making. This study presented a categorical drought prediction system for predicting USDM drought categories in the U.S., based on the initial conditions from USDM and seasonal climate forecasts from NMME. Results of USDM drought categories predictions in the U.S. demonstrate the potential of the prediction system, which is expected to contribute to operational early drought warning in the U.S.

Temperature is a potent driver of regional forest drought stress, disturbance, and tree mortality (Invited)

NASA Astrophysics Data System (ADS)

Williams, P.; Allen, C. D.; Macalady, A.; Griffin, D.; Woodhouse, C. A.; Meko, D. M.; Swetnam, T. W.; Rauscher, S.; Seager, R.; Grissino-Mayer, H.; Dean, J.; Cook, E. R.; Gangodagamage, C.; Cai, M.; McDowell, N. G.

2013-12-01

I present a forest drought-stress index (FDSI) for the Southwestern United States using a comprehensive set of regional tree-ring records for AD 1000-2007. Comparing the last century of FDSI data to observed climate records, regional FDSI appears approximately equally influenced by warm-season atmospheric moisture demand (mostly controlled by temperature) and cold-season precipitation, together explaining an astounding 82% of southwestern FDSI variability. When atmospheric moisture demand intensifies, so does forest drought stress. Importantly, intensified moisture demand is not only associated with decreased tree growth; it is also associated with increased mortality. In particular, among a suite of drought-related climate variables, warm-season moisture demand has been the best predictor of annual forest area burned by stand-replacing wildfires since at least 1984. Further, the relationship between moisture demand and burned area is exponential, where incremental increases in moisture demand correspond to increasingly large influences on area burned. Using climate observations to update FDSI through 2013, I show that the current Southwestern drought-stress event, which began in 2000, is the most severe in over 400 years, but not as severe as those that occurred during the infamous 'Megadroughts' of AD 1000-1600. Like the Megadroughts of the past, the current drought will come to an end, but unlike the Megadroughts of the past, the current drought and those that will follow will be superimposed upon a warming-induced trend toward increased moisture demand and intensified forest drought stress, disturbance, and mortality. If atmospheric moisture demand continues increasing as projected by climate models, then mean annual Southwestern US climate by the 2050s will be less suitable for forest growth and survival than it was during the worst years of last millennium's Megadroughts. An intense La-Niña driven drought anomaly superimposed upon mean conditions in the 2050

Future discharge drought across climate regions around the world modelled with a synthetic hydrological modelling approach forced by three general circulation models

NASA Astrophysics Data System (ADS)

Wanders, N.; Van Lanen, H. A. J.

2015-03-01

Hydrological drought characteristics (drought in groundwater and streamflow) likely will change in the 21st century as a result of climate change. The magnitude and directionality of these changes and their dependency on climatology and catchment characteristics, however, is uncertain. In this study a conceptual hydrological model was forced by downscaled and bias-corrected outcome from three general circulation models for the SRES A2 emission scenario (GCM forced models), and the WATCH Forcing Data set (reference model). The threshold level method was applied to investigate drought occurrence, duration and severity. Results for the control period (1971-2000) show that the drought characteristics of each GCM forced model reasonably agree with the reference model for most of the climate types, suggesting that the climate models' results after post-processing produce realistic outcomes for global drought analyses. For the near future (2021-2050) and far future (2071-2100) the GCM forced models show a decrease in drought occurrence for all major climates around the world and increase of both average drought duration and deficit volume of the remaining drought events. The largest decrease in hydrological drought occurrence is expected in cold (D) climates where global warming results in a decreased length of the snow season and an increased precipitation. In the dry (B) climates the smallest decrease in drought occurrence is expected to occur, which probably will lead to even more severe water scarcity. However, in the extreme climate regions (desert and polar), the drought analysis for the control period showed that projections of hydrological drought characteristics are most uncertain. On a global scale the increase in hydrological drought duration and severity in multiple regions will lead to a higher impact of drought events, which should motivate water resource managers to timely anticipate the increased risk of more severe drought in groundwater and streamflow

How useful are meteorological drought indicators to assess agricultural drought impacts across Europe?

NASA Astrophysics Data System (ADS)

Bachmair, Sophie; Tanguy, Maliko; Hannaford, Jamie; Stahl, Kerstin

2016-04-01

Drought monitoring and early warning (M&EW) is an important component of agricultural and silvicultural risk management. Meteorological indicators such as the Standardized Precipitation Index (SPI) are widely used in operational M&EW systems and for drought hazard assessment. Meteorological drought yet does not necessarily equate to agricultural drought given differences in drought susceptibility, e.g. crop-specific vulnerability, soil water holding capacity, irrigation and other management practices. How useful are meteorological indicators such as SPI to assess agricultural drought? Would the inclusion of vegetation indicators into drought M&EW systems add value for the agricultural sector? To answer these questions, it is necessary to investigate the link between meteorological indicators and agricultural impacts of drought. Crop yield or loss data is one source of information for drought impacts, yet mostly available as aggregated data at the annual scale. Remotely sensed vegetation stress data offer another possibility to directly assess agricultural impacts with high spatial and temporal resolution and are already used by some M&EW systems. At the same time, reduced crop yield and satellite-based vegetation stress potentially suffer from multi-causality. The aim of this study is therefore to investigate the relation between meteorological drought indicators and agricultural drought impacts for Europe, and to intercompare different agricultural impact variables. As drought indicators we used SPI and the Standardized Precipitation Evaporation Index (SPEI) for different accumulation periods. The focus regarding drought impact variables was on remotely sensed vegetation stress derived from MODIS NDVI (Normalized Difference Vegetation Index) and LST (Land Surface Temperature) data, but the analysis was complemented with crop yield data and text-based information from the European Drought Impact report Inventory (EDII) for selected countries. A correlation analysis

Overexpression of gene encoding the key enzyme involved in proline-biosynthesis (PuP5CS) to improve salt tolerance in switchgrass (Panicum virgatum L.).

PubMed

Guan, Cong; Huang, Yan-Hua; Cui, Xin; Liu, Si-Jia; Zhou, Yun-Zhuan; Zhang, Yun-Wei

2018-05-25

Genetic improvement through overexpressing PuP5CS in switchgrass is feasible for enhancing plant salt stress tolerance. Switchgrass (Panicum virgatum L.) has developed into a dedicated bioenergy crop. To improve the biomass production of switchgrass grown on different types of soil, abiotic stress tolerance traits are considered for its genetic improvement. Proline accumulation is a widespread response when plants are subjected to abiotic stresses such as drought, cold and salinity. In plants, P5CS gene encodes the key regulatory enzyme that plays a crucial role in proline biosynthesis. Here, we introduced the PuP5CS gene (from Puccinellia chinampoensis) into switchgrass by Agrobacterium-mediated transformation. Transgenic lines overexpressing the PuP5CS gene showed phenotypic advantages, in leaf width, internode diameter, internode length, tiller numbers and precocious flowering under normal conditions, and the transgenic lines displayed better regenerative capacity in forming more tillers after harvest. Moreover, the PuP5CS gene enhanced the salt tolerance of transgenic switchgrass by altering a wide range of physiological responses. In accordance with the physiological results, histological analysis of cross sections through the leaf blade showed that the areas of bulliform cells and bundle sheath cells were significantly increased in PuP5CS-overexpressing leaves. The expression levels of ROS scavenging-associated genes in transgenic plants were higher than in control plants under salt stress. The results show that genetic improvement through overexpressing PuP5CS in switchgrass is feasible for enhancing plant stress tolerance.

Laboratory performance of pervious concrete subjected to deicing salts and freeze-thaw.

DOT National Transportation Integrated Search

2015-06-01

Significant research and development have occurred for pervious concrete, but its acceptance in : cold climates is still limited. Vulnerability to freeze-thaw and salt exposure has led to uncertainty : about its long-term performance. Additionally, t...

The U.S./Canadian GEO Bilateral Drought Indices and Definitions Study: Implications for the Canadian Drought Monitor and a Global Drought Early Warning System

NASA Astrophysics Data System (ADS)

Hadwen, T.; Heim, R. R.; Howard, A.

2011-12-01

Drought is a difficult phenomenon to define; the way in which it is monitored, measured, assessed and even the very definition of drought vary from location to location based on the regional climate and the potential impacts. Drought is not an absolute condition but an evolving state brought on by relatively dry weather, growing more severe over time. There are many factors that define a drought and many more that define its impacts. Many definitions and indices are based solely on meteorological characteristics. Although this approach has merit, it is often necessary to go further to define those meteorological conditions in a way that is relevant to the land and water use in a region. A Drought Indices and Definitions Study was initiated in 2010 as part of a GEO Bilateral effort to examine drought across the U.S. and Canada. The Study's deliverables will include a survey of the drought indices used to monitor drought, and a bibliography of research addressing the nature of drought, across the diverse climates of the continent. With an increasing pressure to utilize drought monitoring as a primary indicator of need for disaster assistance, the reliability of drought indices must be validated and utilized in appropriate in various regions. In 2009, following over five years of participation in the North American Drought Monitor (NA-DM), the National Agroclimate Information Service of Agriculture and Agri-Food Canada initiated a project to develop a Canadian Drought Monitor (Can-DM), based on primary principles used in the NA-DM and the US Drought Monitor (US-DM). The process of developing an operational monitoring tool and using drought indices in a vast and environmentally diverse country has been challenging. in Canada, many of the commonly used indices are not appropriate in certain regions or data densities do not allow for proper use. This paper will discuss the experiences that the Can-DM team has had dealing with these challenges, how these experiences

Disturbance and rehabilitation of cold to warm desert transitional shrublands in southwestern Utah

Treesearch

Chad Reid; James Bowns

2008-01-01

Extensive drought during the years of 2002, 2003, and 2004 removed most plant cover. On May 10, 2004, a cold front to the north resulted in weather stations in the area recording 600+ miles of wind travel (comparable to 60 mile hour winds for 10 hours). The effect of these two climatic events was to bury the Mile Square subdivision in wind-blown sand. Sand filled homes...

Global patterns of drought recovery

DOE PAGES

Schwalm, Christopher R.; Anderegg, William R. L.; Michalak, Anna M.; ...

2017-08-09

Drought has major impacts on natural and human systems, and is especially important for land carbon sink variability due to its influence on terrestrial biosphere climate regulation. While 20th Century trends in drought regimes have been varied, “more extreme extremes”, including more frequent and severe droughts, are expected in the 21st Century. Recovery time, the length of time an ecosystem requires to revert to its pre-drought functional state, is a critical metric of drought impact. Yet the factors influencing drought recovery and its spatiotemporal patterns are largely unknown. Here we use three independent global data products of gross primary productivitymore » to show that, across diverse terrestrial ecosystems, drought recovery times are strongly associated with climate and carbon cycle dynamics, with biodiversity and CO 2 fertilization as secondary factors. Our analysis also provides two key insights into the spatiotemporal patterns of drought recovery time: (1) Across the globe, recovery is longest in the tropics and high northern latitudes—critical tipping elements in Earth’s climate system. (2) Drought impacts, the area of ecosystems under active recovery and recovery times, have increased over the 20th century. If future droughts become more frequent, time between droughts may become shorter than drought recovery time, leading to chronically impacted ecosystems.« less

Global patterns of drought recovery

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schwalm, Christopher R.; Anderegg, William R. L.; Michalak, Anna M.

Drought has major impacts on natural and human systems, and is especially important for land carbon sink variability due to its influence on terrestrial biosphere climate regulation. While 20th Century trends in drought regimes have been varied, “more extreme extremes”, including more frequent and severe droughts, are expected in the 21st Century. Recovery time, the length of time an ecosystem requires to revert to its pre-drought functional state, is a critical metric of drought impact. Yet the factors influencing drought recovery and its spatiotemporal patterns are largely unknown. Here we use three independent global data products of gross primary productivitymore » to show that, across diverse terrestrial ecosystems, drought recovery times are strongly associated with climate and carbon cycle dynamics, with biodiversity and CO 2 fertilization as secondary factors. Our analysis also provides two key insights into the spatiotemporal patterns of drought recovery time: (1) Across the globe, recovery is longest in the tropics and high northern latitudes—critical tipping elements in Earth’s climate system. (2) Drought impacts, the area of ecosystems under active recovery and recovery times, have increased over the 20th century. If future droughts become more frequent, time between droughts may become shorter than drought recovery time, leading to chronically impacted ecosystems.« less

Global patterns of drought recovery.

PubMed

Schwalm, Christopher R; Anderegg, William R L; Michalak, Anna M; Fisher, Joshua B; Biondi, Franco; Koch, George; Litvak, Marcy; Ogle, Kiona; Shaw, John D; Wolf, Adam; Huntzinger, Deborah N; Schaefer, Kevin; Cook, Robert; Wei, Yaxing; Fang, Yuanyuan; Hayes, Daniel; Huang, Maoyi; Jain, Atul; Tian, Hanqin

2017-08-09

Drought, a recurring phenomenon with major impacts on both human and natural systems, is the most widespread climatic extreme that negatively affects the land carbon sink. Although twentieth-century trends in drought regimes are ambiguous, across many regions more frequent and severe droughts are expected in the twenty-first century. Recovery time-how long an ecosystem requires to revert to its pre-drought functional state-is a critical metric of drought impact. Yet the factors influencing drought recovery and its spatiotemporal patterns at the global scale are largely unknown. Here we analyse three independent datasets of gross primary productivity and show that, across diverse ecosystems, drought recovery times are strongly associated with climate and carbon cycle dynamics, with biodiversity and CO 2 fertilization as secondary factors. Our analysis also provides two key insights into the spatiotemporal patterns of drought recovery time: first, that recovery is longest in the tropics and high northern latitudes (both vulnerable areas of Earth's climate system) and second, that drought impacts (assessed using the area of ecosystems actively recovering and time to recovery) have increased over the twentieth century. If droughts become more frequent, as expected, the time between droughts may become shorter than drought recovery time, leading to permanently damaged ecosystems and widespread degradation of the land carbon sink.

Global patterns of drought recovery

NASA Astrophysics Data System (ADS)

Schwalm, Christopher R.; Anderegg, William R. L.; Michalak, Anna M.; Fisher, Joshua B.; Biondi, Franco; Koch, George; Litvak, Marcy; Ogle, Kiona; Shaw, John D.; Wolf, Adam; Huntzinger, Deborah N.; Schaefer, Kevin; Cook, Robert; Wei, Yaxing; Fang, Yuanyuan; Hayes, Daniel; Huang, Maoyi; Jain, Atul; Tian, Hanqin

2017-08-01

Drought, a recurring phenomenon with major impacts on both human and natural systems, is the most widespread climatic extreme that negatively affects the land carbon sink. Although twentieth-century trends in drought regimes are ambiguous, across many regions more frequent and severe droughts are expected in the twenty-first century. Recovery time—how long an ecosystem requires to revert to its pre-drought functional state—is a critical metric of drought impact. Yet the factors influencing drought recovery and its spatiotemporal patterns at the global scale are largely unknown. Here we analyse three independent datasets of gross primary productivity and show that, across diverse ecosystems, drought recovery times are strongly associated with climate and carbon cycle dynamics, with biodiversity and CO2 fertilization as secondary factors. Our analysis also provides two key insights into the spatiotemporal patterns of drought recovery time: first, that recovery is longest in the tropics and high northern latitudes (both vulnerable areas of Earth’s climate system) and second, that drought impacts (assessed using the area of ecosystems actively recovering and time to recovery) have increased over the twentieth century. If droughts become more frequent, as expected, the time between droughts may become shorter than drought recovery time, leading to permanently damaged ecosystems and widespread degradation of the land carbon sink.

Drought Monitoring with VegDRI

USGS Publications Warehouse

Brown, Jesslyn F.

2010-01-01

Drought strikes somewhere in the United States every year, turning green landscapes brown as precipitation falls below normal levels and water supplies dwindle. Drought is typically a temporary climatic aberration, but it is also an insidious natural hazard. It might last for weeks, months, or years and may have many negative effects. Drought can threaten crops, livestock, and livelihoods, stress wildlife and habitats, and increase wildfire risks and threats to human health. Drought conditions can vary tremendously from place to place and week to week. Accurate drought monitoring is essential to understand a drought's progression and potential effects, and to provide information necessary to support drought mitigation decisions. It is also crucial in light of climate change where droughts could become more frequent, severe, and persistent.

Genome-Wide Analysis of the RAV Family in Soybean and Functional Identification of GmRAV-03 Involvement in Salt and Drought Stresses and Exogenous ABA Treatment

PubMed Central

Zhao, Shu-Ping; Xu, Zhao-Shi; Zheng, Wei-Jun; Zhao, Wan; Wang, Yan-Xia; Yu, Tai-Fei; Chen, Ming; Zhou, Yong-Bin; Min, Dong-Hong; Ma, You-Zhi; Chai, Shou-Cheng; Zhang, Xiao-Hong

2017-01-01

Transcription factors play vital roles in plant growth and in plant responses to abiotic stresses. The RAV transcription factors contain a B3 DNA binding domain and/or an APETALA2 (AP2) DNA binding domain. Although genome-wide analyses of RAV family genes have been performed in several species, little is known about the family in soybean (Glycine max L.). In this study, a total of 13 RAV genes, named as GmRAVs, were identified in the soybean genome. We predicted and analyzed the amino acid compositions, phylogenetic relationships, and folding states of conserved domain sequences of soybean RAV transcription factors. These soybean RAV transcription factors were phylogenetically clustered into three classes based on their amino acid sequences. Subcellular localization analysis revealed that the soybean RAV proteins were located in the nucleus. The expression patterns of 13 RAV genes were analyzed by quantitative real-time PCR. Under drought stresses, the RAV genes expressed diversely, up- or down-regulated. Following NaCl treatments, all RAV genes were down-regulated excepting GmRAV-03 which was up-regulated. Under abscisic acid (ABA) treatment, the expression of all of the soybean RAV genes increased dramatically. These results suggested that the soybean RAV genes may be involved in diverse signaling pathways and may be responsive to abiotic stresses and exogenous ABA. Further analysis indicated that GmRAV-03 could increase the transgenic lines resistance to high salt and drought and result in the transgenic plants insensitive to exogenous ABA. This present study provides valuable information for understanding the classification and putative functions of the RAV transcription factors in soybean. PMID:28634481

Drought impacts on phloem transport

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sevanto, Sanna Annika

We report drought impacts on phloem transport have attracted attention only recently, despite the well-established, and empirically verified theories on drought impacts on water transport in plants in general. This is because studying phloem transport is challenging. Phloem tissue is relatively small and delicate, and it has often been assumed not to be impacted by drought, or having insignificant impact on plant function or survival compared to the xylem. New evidence, however, suggests that drought responses of the phloem might hold the key for predicting plant survival time during drought or revival capacity after drought. Lastly, this review summarizes currentmore » theories and empirical evidence on how drought might impact phloem transport, and evaluates these findings in relation to plant survival during drought.« less

Drought impacts on phloem transport

DOE PAGES

Sevanto, Sanna Annika

2018-02-12

We report drought impacts on phloem transport have attracted attention only recently, despite the well-established, and empirically verified theories on drought impacts on water transport in plants in general. This is because studying phloem transport is challenging. Phloem tissue is relatively small and delicate, and it has often been assumed not to be impacted by drought, or having insignificant impact on plant function or survival compared to the xylem. New evidence, however, suggests that drought responses of the phloem might hold the key for predicting plant survival time during drought or revival capacity after drought. Lastly, this review summarizes currentmore » theories and empirical evidence on how drought might impact phloem transport, and evaluates these findings in relation to plant survival during drought.« less

Estimating drought risk across Europe from reported drought impacts, hazard indicators and vulnerability factors

NASA Astrophysics Data System (ADS)

Blauhut, V.; Stahl, K.; Stagge, J. H.; Tallaksen, L. M.; De Stefano, L.; Vogt, J.

2015-12-01

Drought is one of the most costly natural hazards in Europe. Due to its complexity, drought risk, the combination of the natural hazard and societal vulnerability, is difficult to define and challenging to detect and predict, as the impacts of drought are very diverse, covering the breadth of socioeconomic and environmental systems. Pan-European maps of drought risk could inform the elaboration of guidelines and policies to address its documented severity and impact across borders. This work (1) tests the capability of commonly applied hazard indicators and vulnerability factors to predict annual drought impact occurrence for different sectors and macro regions in Europe and (2) combines information on past drought impacts, drought hazard indicators, and vulnerability factors into estimates of drought risk at the pan-European scale. This "hybrid approach" bridges the gap between traditional vulnerability assessment and probabilistic impact forecast in a statistical modelling framework. Multivariable logistic regression was applied to predict the likelihood of impact occurrence on an annual basis for particular impact categories and European macro regions. The results indicate sector- and macro region specific sensitivities of hazard indicators, with the Standardised Precipitation Evapotranspiration Index for a twelve month aggregation period (SPEI-12) as the overall best hazard predictor. Vulnerability factors have only limited ability to predict drought impacts as single predictor, with information about landuse and water resources as best vulnerability-based predictors. (3) The application of the "hybrid approach" revealed strong regional (NUTS combo level) and sector specific differences in drought risk across Europe. The majority of best predictor combinations rely on a combination of SPEI for shorter and longer aggregation periods, and a combination of information on landuse and water resources. The added value of integrating regional vulnerability information

Protection of Pyruvate,Pi Dikinase from Maize against Cold Lability by Compatible Solutes 1

PubMed Central

Krall, John P.; Edwards, Gerald E.; Andreo, Carlos S.

1989-01-01

Most C4 species are chilling sensitive and certain enzymes like pyruvate,Pi dikinase of the C4 pathway are also cold labile. The ability of cations and compatible solutes to protect maize (Zea mays) dikinase against cold lability was examined. The enzyme in desalted extracts at pH 8 from preilluminated leaves could be protected against cold lability (at 0°C) by the divalent cations Mn2+, Mg2+, and Ca2+. There was substantial protection by sulfate based salts but little protection by chloride based salts of potassium or ammonium (concentration 250 millimolar). The degree of protection against cold lability under limiting MgCl2 (5 millimolar) was pH sensitive (maximum protection at pH 8), but independent of ionic strength (up to 250 millimolar by addition of KCl). In catalysis Mg2+ is required and Mn2+ could not substitute as a cofactor. Several compatible solutes reduced or prevented the cold inactivation of dikinase (in desalted extracts and the partially purified enzyme), including glycerol, proline, glycinebetaine and trimethylamine-N-oxide (TMAO). TMAO and Mg2+ had an additive effect in protecting dikinase against cold inactivation. TMAO could largely substitute for the divalent cation and addition of TMAO during cold treatment prevented further inactivation. Cold inactivation was partially reversed by incubation at room temperature; with addition of TMAO reversal was complete. The temperature dependence of inactivation at pH 8 and 3 millimolar MgCl2 was evaluated by incubation at 2 to 17°C for 45 minutes, followed by assay at room temperature. At preincubation temperatures below 11°C there was a progressive inactivation which could be prevented by TMAO (450 millimolar). The results are discussed relative to possible effects of the solutes on the quaternary structure of this enzyme, which is known to dissociate at low temperatures. PMID:16666527

The ambiguity of drought events, a bottleneck for Amazon forest drought response modelling

NASA Astrophysics Data System (ADS)

De Deurwaerder, Hannes; Verbeeck, Hans; Baker, Timothy; Christoffersen, Bradley; Ciais, Philippe; Galbraith, David; Guimberteau, Matthieu; Kruijt, Bart; Langerwisch, Fanny; Meir, Patrick; Rammig, Anja; Thonicke, Kirsten; Von Randow, Celso; Zhang, Ke

2016-04-01

Considering the important role of the Amazon forest in the global water and carbon cycle, the prognosis of altered hydrological patterns resulting from climate change provides strong incentive for apprehending the direct implications of drought on the vegetation of this ecosystem. Dynamic global vegetation models have the potential of providing a useful tool to study drought impacts on various spatial and temporal scales. This however assumes the models being able to properly represent drought impact mechanisms. But how well do the models succeed in meeting this assumption? Within this study meteorological driver data and model output data of 4 different DGVMs, i.e. ORCHIDEE, JULES, INLAND and LPGmL, are studied. Using the palmer drought severity index (PDSI) and the mean cumulative water deficit (MWD), temporal and spatial representation of drought events are studied in the driver data and are referenced to historical extreme drought events in the Amazon. Subsequently, within the resulting temporal and spatial frame, we studied the drought impact on the above ground biomass (AGB) and gross primary production (GPP) fluxes. Flux tower data, field inventory data and the JUNG data-driven GPP product for the Amazon region are used for validation. Our findings not only suggest that the current state of the studied DGVMs is inadequate in representing Amazon droughts in general, but also highlights strong inter-model differences in drought responses. Using scatterplot-studies and input-output correlations, we provide insight in the origin of these encountered inter-model differences. In addition, we present directives of model development and improvement in scope of Amazon forest drought response modelling.

The German drought monitor

NASA Astrophysics Data System (ADS)

Zink, Matthias; Samaniego, Luis; Kumar, Rohini; Thober, Stephan; Mai, Juliane; Schäfer, David; Marx, Andreas

2016-07-01

The 2003 drought event in Europe had major implications on many societal sectors, including energy production, health, forestry and agriculture. The reduced availability of water accompanied by high temperatures led to substantial economic losses on the order of 1.5 Billion Euros, in agriculture alone. Furthermore, soil droughts have considerable impacts on ecosystems, forest fires and water management. Monitoring soil water availability in near real-time and at high-resolution, i.e., 4 × 4 km2, enables water managers to mitigate the impact of these extreme events. The German drought monitor was established in 2014 as an online platform. It uses an operational modeling system that consists of four steps: (1) a daily update of observed meteorological data by the German Weather Service, with consistency checks and interpolation; (2) an estimation of current soil moisture using the mesoscale hydrological model; (3) calculation of a quantile-based soil moisture index (SMI) based on a 60 year data record; and (4) classification of the SMI into five drought classes ranging from abnormally dry to exceptional drought. Finally, an easy to understand map is produced and published on a daily basis on www.ufz.de/droughtmonitor. Analysis of the ongoing 2015 drought event, which garnered broad media attention, shows that 75% of the German territory underwent drought conditions in July 2015. Regions such as Northern Bavaria and Eastern Saxony, however, have been particularly prone to drought conditions since autumn 2014. Comparisons with historical droughts show that the 2015 event is amongst the ten most severe drought events observed in Germany since 1954 in terms of its spatial extent, magnitude and duration.

Quantifying agricultural drought impacts using soil moisture model and drought indices in South Korea

NASA Astrophysics Data System (ADS)

Nam, W. H.; Bang, N.; Hong, E. M.; Pachepsky, Y. A.; Han, K. H.; Cho, H.; Ok, J.; Hong, S. Y.

2017-12-01

Agricultural drought is defined as a combination of abnormal deficiency of precipitation, increased crop evapotranspiration demands from high-temperature anomalies, and soil moisture deficits during the crop growth period. Soil moisture variability and their spatio-temporal trends is a key component of the hydrological balance, which determines the crop production and drought stresses in the context of agriculture. In 2017, South Korea has identified the extreme drought event, the worst in one hundred years according to the South Korean government. The objective of this study is to quantify agricultural drought impacts using observed and simulated soil moisture, and various drought indices. A soil water balance model is used to simulate the soil water content in the crop root zone under rain-fed (no irrigation) conditions. The model used includes physical process using estimated effective rainfall, infiltration, redistribution in soil water zone, and plant water uptake in the form of actual crop evapotranspiration. Three widely used drought indices, including the Standardized Precipitation Index (SPI), the Standardized Precipitation Evapotranspiration Index (SPEI), and the Self-Calibrated Palmer Drought Severity Index (SC-PDSI) are compared with the observed and simulated soil moisture in the context of agricultural drought impacts. These results demonstrated that the soil moisture model could be an effective tool to provide improved spatial and temporal drought monitoring for drought policy.

An Update on Genetic Modification of Chickpea for Increased Yield and Stress Tolerance.

PubMed

Kumar, Manoj; Yusuf, Mohd Aslam; Nigam, Manisha; Kumar, Manoj

2018-06-26

Chickpea is a highly nutritious grain legume crop, widely appreciated as a health food, especially in the Indian subcontinent. The major constraints on chickpea production are biotic (Helicoverpa, bruchid, aphid, ascochyta) and abiotic (drought, heat, salt, cold) stresses, which reduce the yield by up to 90%. Various strategies like conventional breeding, molecular breeding, and modern plant breeding have been used to overcome these problems. Conventionally, breeding programs aim at development of varieties that combine maximum number of traits through inter-specific hybridization, wide hybridization, and hybridization involving more than two parents. Breeding is difficult in this crop because of its self-pollinating nature and limited genetic variation. Recent advances in in vitro culture and gene technologies offer unique opportunities to realize the full potential of chickpea production. However, as of date, no transgenic chickpea variety has been approved for cultivation in the world. In this review, we provide an update on the development of genetically modified chickpea plants, including those resistant to Helicoverpa armigera, Callosobruchus maculatus, Aphis craccivora, as well as to drought and salt stress. The genes utilized for development of resistance against pod borer, bruchid, aphid, drought, and salt tolerance, namely, Bt, alpha amylase inhibitor, ASAL, P5CSF129A, and P5CS, respectively, are discussed.

The F-box family genes as key elements in response to salt, heavy mental, and drought stresses in Medicago truncatula.

PubMed

Song, Jian Bo; Wang, Yan Xiang; Li, Hai Bo; Li, Bo Wen; Zhou, Zhao Sheng; Gao, Shuai; Yang, Zhi Min

2015-07-01

F-box protein is a subunit of Skp1-Rbx1-Cul1-F-box protein (SCF) complex with typically conserved F-box motifs of approximately 40 amino acids and is one of the largest protein families in eukaryotes. F-box proteins play critical roles in selective and specific protein degradation through the 26S proteasome. In this study, we bioinformatically identified 972 putative F-box proteins from Medicago truncatula genome. Our analysis showed that in addition to the conserved motif, the F-box proteins have several other functional domains in their C-terminal regions (e.g., LRRs, Kelch, FBA, and PP2), some of which were found to be M. truncatula species-specific. By phylogenetic analysis of the F-box motifs, these proteins can be classified into three major families, and each family can be further grouped into more subgroups. Analysis of the genomic distribution of F-box genes on M. truncatula chromosomes revealed that the evolutional expansion of F-box genes in M. truncatula was probably due to localized gene duplications. To investigate the possible response of the F-box genes to abiotic stresses, both publicly available and customer-prepared microarrays were analyzed. Most of the F-box protein genes can be responding to salt and heavy metal stresses. Real-time PCR analysis confirmed that some of the F-box protein genes containing heat, drought, salicylic acid, and abscisic acid responsive cis-elements were able to respond to the abiotic stresses.

Drought and Snow: Analysis of Drivers, Processes and Impacts of Streamflow Droughts in Snow-Dominated Regions

NASA Astrophysics Data System (ADS)

Van Loon, Anne; Laaha, Gregor; Van Lanen, Henny; Parajka, Juraj; Fleig, Anne; Ploum, Stefan

2016-04-01

Around the world, drought events with severe socio-economic impacts seem to have a link with winter snowpack. That is the case for the current California drought, but analysing historical archives and drought impact databases for the US and Europe we found many impacts that can be attributed to snowpack anomalies. Agriculture and electricity production (hydropower) were found to be the sectors that are most affected by drought related to snow. In this study, we investigated the processes underlying hydrological drought in snow-dominated regions. We found that drought drivers are different in different regions. In Norway, more than 90% of spring streamflow droughts were preceded by below-average winter precipitation, while both winter air temperature and spring weather were indifferent. In Austria, however, spring streamflow droughts could only be explained by a combination of factors. For most events, winter and spring air temperatures were above average (70% and 65% of events, respectively), and winter and spring precipitation was below average (75% and 80%). Because snow storage results from complex interactions between precipitation and temperature and these variables vary strongly with altitude, snow-related drought drivers have a large spatial variability. The weather input is subsequently modified by land properties. Multiple linear regression between drought severity variables and a large number of catchment characteristics for 44 catchments in Austria showed that storage influences both drought duration and deficit volume. The seasonal storage of water in snow and glaciers was found to be a statistically important variable explaining streamflow drought deficit. Our drought impact analysis in Europe also showed that 40% of the selected drought impacts was caused by a combination of snow-related and other drought types. For example, the combination of a winter drought with a preceding or subsequent summer drought was reported to have a large effect on

Drought and Snow: Analysis of Drivers, Processes and Impacts of Streamflow Droughts in Snow-Dominated Regions

NASA Astrophysics Data System (ADS)

Van Loon, A.; Laaha, G.; Van Lanen, H.; Parajka, J.; Fleig, A. K.; Ploum, S.

2015-12-01

Around the world, drought events with severe socio-economic impacts seem to have a link with winter snowpack. That is the case for the current California drought, but analysing historical archives and drought impact databases for the US and Europe we found many impacts that can be attributed to snowpack anomalies. Agriculture and electricity production (hydropower) were found to be the sectors that are most affected by drought related to snow. In this study, we investigated the processes underlying hydrological drought in snow-dominated regions. We found that drought drivers are different in different regions. In Norway, more than 90% of spring streamflow droughts were preceded by below-average winter precipitation, while both winter air temperature and spring weather were indifferent. In Austria, however, spring streamflow droughts could only be explained by a combination of factors. For most events, winter and spring air temperatures were above average (70% and 65% of events, respectively), and winter and spring precipitation was below average (75% and 80%). Because snow storage results from complex interactions between precipitation and temperature and these variables vary strongly with altitude, snow-related drought drivers have a large spatial variability. The weather input is subsequently modified by land properties. Multiple linear regression between drought severity variables and a large number of catchment characteristics for 44 catchments in Austria showed that storage influences both drought duration and deficit volume. The seasonal storage of water in snow and glaciers was found to be a statistically important variable explaining streamflow drought deficit. Our drought impact analysis in Europe also showed that 40% of the selected drought impacts was caused by a combination of snow-related and other drought types. For example, the combination of a winter drought with a preceding or subsequent summer drought was reported to have a large effect on

Genome-assisted Breeding For Drought Resistance

PubMed Central

Khan, Awais; Sovero, Valpuri; Gemenet, Dorcus

2016-01-01

Drought stress caused by unpredictable precipitation poses a major threat to food production worldwide, and its impact is only expected to increase with the further onset of climate change. Understanding the effect of drought stress on crops and plants' response is critical for developing improved varieties with stable high yield to fill a growing food gap from an increasing population depending on decreasing land and water resources. When a plant encounters drought stress, it may use multiple response types, depending on environmental conditions, drought stress intensity and duration, and the physiological stage of the plant. Drought stress responses can be divided into four broad types: drought escape, drought avoidance, drought tolerance, and drought recovery, each characterized by interacting mechanisms, which may together be referred to as drought resistance mechanisms. The complex nature of drought resistance requires a multi-pronged approach to breed new varieties with stable and enhanced yield under drought stress conditions. High throughput genomics and phenomics allow marker-assisted selection (MAS) and genomic selection (GS), which offer rapid and targeted improvement of populations and identification of parents for rapid genetic gains and improved drought-resistant varieties. Using these approaches together with appropriate genetic diversity, databases, analytical tools, and well-characterized drought stress scenarios, weather and soil data, new varieties with improved drought resistance corresponding to grower preferences can be introduced into target regions rapidly. PMID:27499682

Cloning and characterization of a SnRK2 gene from Jatropha curcas L.

PubMed

Chun, J; Li, F-S; Ma, Y; Wang, S-H; Chen, F

2014-12-19

Although the SnRK2 class of Ser/Thr protein kinases is critical for signal transduction and abiotic stress resistance in plants, there have been no studies to examine SnRK2 in Jatropha curcas L. In the present study, JcSnRK2 was cloned from J. curcas using the rapid amplification of cDNA end technique and characterized. The JcSnRK2 genomic sequence is 2578 base pairs (bp), includes 10 exons and 9 introns, and the 1017-bp open reading frame encodes 338 amino acids. JcSnRK2 was transcribed in all examined tissues, with the highest transcription rate observed in the roots, followed by the leaves and stalks; the lowest rate was observed in flowers and seeds. JcSnRK2 expression increased following abscisic acid treatment, salinity, and drought stress. During a 48-h stress period, the expression of JcSnRK2 showed 2 peaks and periodic up- and downregulation. JcSnRK2 was rapidly activated within 1 h under salt and drought stress, but not under cold stress. Because of the gene sequence and expression similarity of JcSnRK2 to AtSnRK2.8, primarily in the roots, an eukaryotic expression vector containing the JcSnRK2 gene (pBI121-JcSnRK2) was constructed and introduced to the Arabidopsis AtSnRK2.8 mutant snf2.8. JcSnRK2-overexpressing plants exhibited higher salt and drought tolerance, further demonstrating the function of JcSnRK2 in the osmotic stress response. J. curcas is highly resistant to extreme salt and drought conditions and JcSnRK2 was found to be activated under these conditions. Thus, JcSnRK2 is potential candidate for improving crop tolerance to salt and drought stress.

Data Assimilation to Improve CMAQ Model Estimates of Particulate Matter Pollution during Wintertime Persistent Cold Air Pool Events in Salt Lake City, Utah

NASA Astrophysics Data System (ADS)

Ivey, C. E.; Balachandran, S.; Russell, A. G.; Hu, Y.; Holmes, H.

2017-12-01

More than one million people live in Salt Lake Valley, Utah, where wintertime pollution reaches unhealthy levels due to the unique meteorology and orography of the region. Persistent cold air pool (PCAP) events occur when high pressure ridges create stagnant conditions over a valley, which hampers large-scale advection and reduces surface wind speeds. During PCAP periods the fraction of incoming solar radiation that reaches the valley floor is also reduced, leading to temperature inversions that allow pollution to build. Pollution levels continue to climb until a washout event removes the pollutants from the valley. Washout events include high winds or precipitation events with advection or wet deposition related removal processes, respectively. In this work, novel data assimilation and source apportionment techniques are applied for January and February 2007 to analyze CMAQ-modeled source composition and source impacts for the Salt Lake Valley during PCAP events. First, a hybrid source-oriented apportionment model is applied over continental U.S. to determine observation and model-based impacts from 20 sources, including agricultural activities, fossil fuel combustion, dust, and metals processing. Then, a secondary bias correction method is applied to better quantify the source impacts on secondary PM2.5, which constitutes the majority of the PM2.5 mass. Revised concentrations reflect what was previously reported in studies of PCAP pollution in the Salt Lake Valley, where the dominant aerosol was found to be ammonium nitrate. Further, gasoline and natural gas combustion were found to be the greatest contributing sources to aerosol concentrations during the PCAP events. The benefit of the data assimilation methods is the availability of spatially and temporally resolved model estimates of source impacts that better reflect observed concentrations.

Experimental droughts: Are precipitation variability and methodological trends hindering our understanding of ecological sensitivities to drought?

NASA Astrophysics Data System (ADS)

Hoover, D. L.; Wilcox, K.; Young, K. E.

2017-12-01

Droughts are projected to increase in frequency and intensity with climate change, which may have dramatic and prolonged effects on ecosystem structure and function. There are currently hundreds of published, ongoing, and new drought experiments worldwide aimed to assess ecosystem sensitivities to drought and identify the mechanisms governing ecological resistance and resilience. However, to date, the results from these experiments have varied widely, and thus patterns of drought sensitivities have been difficult to discern. This lack of consensus at the field scale, limits the abilities of experiments to help improve land surface models, which often fail to realistically simulate ecological responses to extreme events. This is unfortunate because models offer an alternative, yet complementary approach to increase the spatial and temporal assessment of ecological sensitivities to drought that are not possible in the field due to logistical and financial constraints. Here we examined 89 published drought experiments, along with their associated historical precipitation records to (1) identify where and how drought experiments have been imposed, (2) determine the extremity of drought treatments in the context of historical climate, and (3) assess the influence of precipitation variability on drought experiments. We found an overall bias in drought experiments towards short-term, extreme experiments in water-limited ecosystems. When placed in the context of local historical precipitation, most experimental droughts were extreme, with 61% below the 5th, and 43% below the 1st percentile. Furthermore, we found that interannual precipitation variability had a large and potentially underappreciated effect on drought experiments due to the co-varying nature of control and drought treatments. Thus detecting ecological effects in experimental droughts is strongly influenced by the interaction between drought treatment magnitude, precipitation variability, and key

Performance evaluation of molten salt thermal storage systems

NASA Astrophysics Data System (ADS)

Kolb, G. J.; Nikolai, U.

1987-09-01

The molton salt thermal storage system located at the Central Receiver Test Facility (CRTF) was recently subjected to thermal performance tests. The system is composed of a hot storage tank containing molten nitrate salt at a temperature of 1050 F and a cold tank containing 550 F salt with associated valves and controls. It is rated at 7 MWht and was designed and installed by Martin Marietta Corporation in 1982. The results of these tests were used to accomplish four objectives: (1) to compare the current thermal performance of the system with the performance of the system soon after it was installed, (2) to validate a dynamic computer model of the system, (3) to obtain an estimate of an annual system efficiency for a hypothetical commercial scale 1200 MWht system and (4) to compare the performance of the CRTF system with thermal storage systems developed by the European solar community.

USGS integrated drought science

USGS Publications Warehouse

Ostroff, Andrea C.; Muhlfeld, Clint C.; Lambert, Patrick M.; Booth, Nathaniel L.; Carter, Shawn L.; Stoker, Jason M.; Focazio, Michael J.

2017-06-05

Project Need and OverviewDrought poses a serious threat to the resilience of human communities and ecosystems in the United States (Easterling and others, 2000). Over the past several years, many regions have experienced extreme drought conditions, fueled by prolonged periods of reduced precipitation and exceptionally warm temperatures. Extreme drought has far-reaching impacts on water supplies, ecosystems, agricultural production, critical infrastructure, energy costs, human health, and local economies (Milly and others, 2005; Wihlite, 2005; Vörösmarty and others, 2010; Choat and others, 2012; Ledger and others, 2013). As global temperatures continue to increase, the frequency, severity, extent, and duration of droughts are expected to increase across North America, affecting both humans and natural ecosystems (Parry and others, 2007).The U.S. Geological Survey (USGS) has a long, proven history of delivering science and tools to help decision-makers manage and mitigate effects of drought. That said, there is substantial capacity for improved integration and coordination in the ways that the USGS provides drought science. A USGS Drought Team was formed in August 2016 to work across USGS Mission Areas to identify current USGS drought-related research and core capabilities. This information has been used to initiate the development of an integrated science effort that will bring the full USGS capacity to bear on this national crisis.

Spring Soil Temperature Anomalies over Tibetan Plateau and Summer Droughts/Floods in East Asia

NASA Astrophysics Data System (ADS)

Xue, Y.; Li, W.; LI, Q.; Diallo, I.; Chu, P. C.; Guo, W.; Fu, C.

2017-12-01

Recurrent extreme climate events, such as droughts and floods, are important features of the climate of East Asia, especially over the Yangtze River basin. Many studies have attributed these episodes to variability and anomaly of global sea surface temperatures (SST) anomaly. In addition, snow in the Tibetan Plateau has also been considered as one of the factors affecting the Asian monsoon variability. However, studies have consistently shown that SST along is unable to explain the extreme climate events fully and snow has difficulty to use as a predictor. Remote effects of observed large-scale land surface temperature (LST) and subsurface temperature variability in Tibetan Plateau (TP) on East Asian regional droughts/floods, however, have been largely ignored. We conjecture that a temporally filtered response to snow anomalies may be preserved in the LST anomaly. In this study, evidence from climate observations and model simulations addresses the LST/SUBT effects. The Maximum Covariance Analysis (MCA) of observational data identifies that a pronounce spring LST anomaly pattern over TP is closely associated with precipitation anomalies in East Asia with a dipole pattern, i.e., negative/positive TP spring LST anomaly is associated with the summer drought/flood over the region south of the Yangtze River and wet/dry conditions to the north of the Yangtze River. Climate models were used to demonstrate a causal relationship between spring cold LST anomaly in the TP and the severe 2003 drought over the southern part of the Yangtze River in eastern Asia. This severe drought resulted in 100 x 106 kg crop yield losses and an economic loss of 5.8 billion Chinese Yuan. The modeling study suggests that the LST effect produced about 58% of observed precipitation deficit; while the SST effect produced about 32% of the drought conditions. Meanwhile, the LST and SST effects also simulated the observed flood over to the north of the Yangtze River. This suggests that inclusion of

Risk to Drought in Mexico

NASA Astrophysics Data System (ADS)

Magana, V.

2016-12-01

Drought is one of the major meteorological hazards in Mexico given the semiarid and arid conditions in most of its territory. The recent drought event between 2011 and 2013 led to one of the major socioeconomic and environmental crisis in recent years in relation to water deficit mainly in northern Mexico. But the impacts of meteorological droughts are not only related to precipitation deficit, but to the water crisis context in which the climatic anomaly occurs. In other words, the drought hazard occurs in a vulnerability context that results in risks at levels that translate into hydrological, agricultural and socioeconomic droughts. The dynamics of prolonged droughts in Mexico has been studied in relation to low frequency oscillations in the Pacific and Atlantic oceans (Méndez and Magaña 2010). On the other hand, the vulnerability to drought has been characterized by means of socioeconomic and physical indicators that reflect the dynamical and multifactorial characteristics of this element (Neri and Magaña 2016). The combination of hazard and vulnerability led to an estimate of risk to drought that explains the drought impacts in recent years. The Mexican government has developed a national strategy to prevent or at least ameliorate the impacts of droughts by establishing the National Program against Drought (PRONACOSE) for each one of the thirteen hydrologic administrative regions that compose the Mexican territory. The main idea behind PRONACOSE is to respond to drought as it reaches a higher level of intensity. Some of the protocols in PRONACOSE are based on a risk analysis and proposals by water stakeholders. It is found that PRONACOSE could better work if a risk management preventive scheme is implemented making use of the knowledge on the predictability of drought in Mexico on various time scales. The examples of potential risk to drought management schemes in Mexico for some of the hydrologic administrative regions are presented.

A Look into the National Drought Mitigation Center: Providing 15 Years of Drought Services (Invited)

NASA Astrophysics Data System (ADS)

Svoboda, M. D.; Hayes, M. J.; Knutson, C. L.; Wardlow, B. D.

2009-12-01

The National Drought Mitigation Center (NDMC) was formed in 1995 at the University of Nebraska-Lincoln. Over the past 15 years, the NDMC has made it a priority to work with various local, state, tribal and federal entities to provide a suite of drought/climate services, with a goal of bringing research to fruition through applications and operations. Through our research and outreach projects, the NDMC has worked to reduce risk to drought by developing several mitigation strategies, monitoring and decision making tools and other services aimed at enhancing our nation’s capacity to cope with drought. Two of the earliest NDMC activities were the creation of a website and assessing drought conditions around the United States. An electronic drought clearinghouse was built in 1995 at drought.unl.edu. The site was designed, and still concentrates, on the concepts of drought monitoring, planning, and mitigation and also serves as a repository of information from around the world. The NDMC’s electronic quarterly newsletter, DroughtScape, disseminates information about all things drought to people across the country. In addition, the NDMC has developed and is home to websites for the U.S. Drought Monitor (USDM), Drought Impact Reporter (DIR), and the Vegetation Drought Response Index (VegDRI). In an effort to inform decision makers, the NDMC continually pursues ways to raise the awareness and visibility of drought as one of the most costly hazards we face. This began in the mid-1990s with the creation of a state-based drought impact assessment map that would help lead to the formation of the USDM in 1999 and the DIR in 2005. The NDMC plays a key role in producing the weekly USDM and the monthly North American Drought Monitor (NADM). The USDM was created out of collaborations between the NDMC, United States Department of Agriculture (USDA) and National Oceanic and Atmospheric Administration (NOAA) and has quickly become one of the most widely used products in assessing

Drought timing and local climate determine the sensitivity of eastern temperate forests to drought.

PubMed

D'Orangeville, Loïc; Maxwell, Justin; Kneeshaw, Daniel; Pederson, Neil; Duchesne, Louis; Logan, Travis; Houle, Daniel; Arseneault, Dominique; Beier, Colin M; Bishop, Daniel A; Druckenbrod, Daniel; Fraver, Shawn; Girard, François; Halman, Joshua; Hansen, Chris; Hart, Justin L; Hartmann, Henrik; Kaye, Margot; Leblanc, David; Manzoni, Stefano; Ouimet, Rock; Rayback, Shelly; Rollinson, Christine R; Phillips, Richard P

2018-06-01

Projected changes in temperature and drought regime are likely to reduce carbon (C) storage in forests, thereby amplifying rates of climate change. While such reductions are often presumed to be greatest in semi-arid forests that experience widespread tree mortality, the consequences of drought may also be important in temperate mesic forests of Eastern North America (ENA) if tree growth is significantly curtailed by drought. Investigations of the environmental conditions that determine drought sensitivity are critically needed to accurately predict ecosystem feedbacks to climate change. We matched site factors with the growth responses to drought of 10,753 trees across mesic forests of ENA, representing 24 species and 346 stands, to determine the broad-scale drivers of drought sensitivity for the dominant trees in ENA. Here we show that two factors-the timing of drought, and the atmospheric demand for water (i.e., local potential evapotranspiration; PET)-are stronger drivers of drought sensitivity than soil and stand characteristics. Drought-induced reductions in tree growth were greatest when the droughts occurred during early-season peaks in radial growth, especially for trees growing in the warmest, driest regions (i.e., highest PET). Further, mean species trait values (rooting depth and ψ 50 ) were poor predictors of drought sensitivity, as intraspecific variation in sensitivity was equal to or greater than interspecific variation in 17 of 24 species. From a general circulation model ensemble, we find that future increases in early-season PET may exacerbate these effects, and potentially offset gains in C uptake and storage in ENA owing to other global change factors. © 2018 John Wiley & Sons Ltd.

Towards Improved Understanding of Drought and Drought Impacts from Long Term Earth Observation Records

NASA Astrophysics Data System (ADS)

Champagne, C.; Wang, S.; Liu, J.; Hadwen, T. A.

2017-12-01

Drought is a complex natural disaster, which often emerges slowly, but can occur at various time scales and have impacts that are not well understood. Long term observations of drought intensity and frequency are often quantified from precipitation and temperature based indices or modelled estimates of soil water storage. The maturity of satellite based observations has created the potential to enhance the understanding of drought and drought impacts, particularly in regions where traditional data sets are limited by remoteness or inaccessibility, and where drought processes are not well-quantified by models. Long term global satellite data records now provide observations of key hydrological variables, including evaporation modelled from thermal sensors, soil moisture from microwave sensors, ground water from gravity sensors and vegetation condition that can be modelled from optical sensors. This study examined trends in drought frequency, intensity and duration over diverse ecoregions in Canada, including agricultural, grassland, forested and wetland areas. Trends in drought were obtained from the Canadian Drought Monitor as well as meteorological based indices from weather stations, and evaluated against satellite derived information on evaporative stress (Anderson et al. 2011), soil moisture (Champagne et al. 2015), terrestrial water storage (Wang and Li 2016) and vegetation condition (Davidson et al. 2009). Data sets were evaluated to determine differences in how different sensors characterize the hydrology and impacts of drought events from 2003 to 2016. Preliminary results show how different hydrological observations can provide unique information that can tie causes of drought (water shortages resulting from precipitation, lack of moisture storage or evaporative stress) to impacts (vegetation condition) that hold the potential to improve the understanding and classification of drought events.

TaABC1, a member of the activity of bc1 complex protein kinase family from common wheat, confers enhanced tolerance to abiotic stresses in Arabidopsis

PubMed Central

Wang, Caixiang; Jing, Ruilian; Mao, Xinguo; Chang, Xiaoping; Li, Ang

2011-01-01

Abiotic stresses such as drought, salinity, and low temperature have drastic effects on plant growth and development. However, the molecular mechanisms regulating biochemical and physiological changes in response to stresses are not well understood. Protein kinases are major signal transduction factors among the reported molecular mechanisms mediating acclimation to environmental changes. Protein kinase ABC1 (activity of bc1 complex) is involved in regulating coenzyme Q biosynthesis in mitochondria in yeast (Saccharomyces cersvisiae), and in balancing oxidative stress in chloroplasts in Arabidopsis thaliana. In the current study, TaABC1 (Triticum aestivum L. activity of bc1 complex) protein kinase was localized to the cell membrane, cytoplasm, and nucleus. The effects of overexpressing TaABC1 in transgenic Arabidopsis plants on responses to drought, salt, and cold stress were further investigated. Transgenic Arabidopsis overexpressing the TaABC1 protein showed lower water loss and higher osmotic potential, photochemistry efficiency, and chlorophyll content, while cell membrane stability and controlled reactive oxygen species homeostasis were maintained. In addition, overexpression of TaABC1 increased the expression of stress-responsive genes, such as DREB1A, DREB2A, RD29A, ABF3, KIN1, CBF1, LEA, and P5CS, detected by real-time PCR analysis. The results suggest that TaABC1 overexpression enhances drought, salt, and cold stress tolerance in Arabidopsis, and imply that TaABC1 may act as a regulatory factor involved in a multiple stress response pathways. PMID:21115661

Drought and resprouting plants

DOE PAGES

Zeppel, Melanie J. B.; Harrison, Sandy P.; Adams, Henry D.; ...

2014-12-17

Many species have the ability to resprout vegetatively after a substantial loss of biomass induced by environmental stress, including drought. Many of the regions characterised by ecosystems where resprouting is common are projected to experience more frequent and intense drought during the 21 st century. However, in assessments of ecosystem response to drought disturbance there has been scant consideration of the resilience and post-drought recovery of resprouting species. Systematic differences in hydraulic and allocation traits suggest that resprouting species are more resilient to drought-stress than nonresprouting species. Evidence suggests that ecosystems dominated by resprouters recover from disturbance more quickly thanmore » ecosystems dominated by nonresprouters. The ability of resprouters to avoid mortality and withstand drought, coupled with their ability to recover rapidly, suggests that the impact of increased drought stress in ecosystems dominated by these species may be small. Furthermore, the strategy of resprouting needs to be modelled explicitly to improve estimates of future climate-change impacts on the carbon cycle, but this will require several important knowledge gaps to be filled before resprouting can be properly implemented.« less

Drought and resprouting plants.

PubMed

Zeppel, Melanie J B; Harrison, Sandy P; Adams, Henry D; Kelley, Douglas I; Li, Guangqi; Tissue, David T; Dawson, Todd E; Fensham, Rod; Medlyn, Belinda E; Palmer, Anthony; West, Adam G; McDowell, Nate G

2015-04-01

Many species have the ability to resprout vegetatively after a substantial loss of biomass induced by environmental stress, including drought. Many of the regions characterised by ecosystems where resprouting is common are projected to experience more frequent and intense drought during the 21st Century. However, in assessments of ecosystem response to drought disturbance there has been scant consideration of the resilience and post-drought recovery of resprouting species. Systematic differences in hydraulic and allocation traits suggest that resprouting species are more resilient to drought-stress than nonresprouting species. Evidence suggests that ecosystems dominated by resprouters recover from disturbance more quickly than ecosystems dominated by nonresprouters. The ability of resprouters to avoid mortality and withstand drought, coupled with their ability to recover rapidly, suggests that the impact of increased drought stress in ecosystems dominated by these species may be small. The strategy of resprouting needs to be modelled explicitly to improve estimates of future climate-change impacts on the carbon cycle, but this will require several important knowledge gaps to be filled before resprouting can be properly implemented. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

Drought-responsive protein profiles reveal diverse defense pathways in corn kernels under field drought atress

USDA-ARS?s Scientific Manuscript database

Drought stress is a major factor which contributes to disease susceptibility and yield loss in agricultural crops. To identify drought responsive proteins and explore metabolic pathways involved in maize tolerance to drought stress, two lines (B73 and Lo964) with contrasting drought sensitivity were...

Building Gateway Tools for Informed Decision Making: The Drought Risk Atlas and U.S. Drought Monitor

NASA Astrophysics Data System (ADS)

Svoboda, M.; Fuchs, B.; Poulsen, C.; Nothwehr, J.; Owen, S.

2014-12-01

The National Drought Mitigation Center (NDMC) (http://drought.unl.edu) has been working with the National Integrated Drought Information System (NIDIS) (http://drought.gov;) and other partners with a goal of developing tools to enhance drought risk management activities in the U.S. and around the world. The NDMC is a national center founded in 1995 and located at the University of Nebraska-Lincoln. The NDMC conducts basic and applied research, provides a variety of services and produces decision support applications. In addition, the NDMC is involved heavily in education, outreach and planning activities and maintains a number of operational drought-related tools and products including the U.S. Drought Monitor (USDM), Drought Impact Reporter (DIR), Vegetation Drought Response Index (VegDRI) and the Drought Risk Atlas (DRA). The NDMC's recently launched Drought Risk Atlas (DRA) (http://droughtatlas.unl.edu) and the continually evolving U.S. Drought Monitor (http://droughtmonitor.unl.edu;) will be the focus of this presentation. The DRA was launched in 2014 in order to help better answer the common questions of "How does this drought compare to the Dust Bowl years or some other regional drought of record?", or "How often do we see a drought as severe as this?", and "Are we seeing trends in drought frequency?". Access to new digital data sources, geospatial tools and analyses, and dissemination through a web-based interface has allowed us to triple the original National Drought Atlas station sample size and roughly double the period of record in standing up the new DRA. Building off of feedback from the user community, the SPI, SPEI, PDSI, self-calibrated PDSI, Deciles and other climatology (to also include hydrology) products are included. It is anticipated that this tool will heighten awareness and enhance decision support activities with regards to drought risk for policy makers, resource managers, producers, planners, media and the public. Examples of the DRA

Mutational Evidence for the Critical Role of CBF Transcription Factors in Cold Acclimation in Arabidopsis1

PubMed Central

Zhang, Zhengjing; Li, Yuanya

2016-01-01

The three tandemly arranged CBF genes, CBF1, CBF2, and CBF3, are involved in cold acclimation. Due to the lack of stable loss-of-function Arabidopsis (Arabidopsis thaliana) mutants deficient in all three CBF genes, it is still unclear whether the CBF genes are essential for freezing tolerance and whether they may have other functions besides cold acclimation. In this study, we used the CRISPR/Cas9 system to generate cbf single, double, and triple mutants. Compared to the wild type, the cbf triple mutants are extremely sensitive to freezing after cold acclimation, demonstrating that the three CBF genes are essential for cold acclimation. Our results show that the three CBF genes also contribute to basal freezing tolerance. Unexpectedly, we found that the cbf triple mutants are defective in seedling development and salt stress tolerance. Transcript profiling revealed that the CBF genes regulate 414 cold-responsive (COR) genes, of which 346 are CBF-activated genes and 68 are CBF-repressed genes. The analysis suggested that CBF proteins are extensively involved in the regulation of carbohydrate and lipid metabolism, cell wall modification, and gene transcription. Interestingly, like the triple mutants, cbf2 cbf3 double mutants are more sensitive to freezing after cold acclimation compared to the wild type, but cbf1 cbf3 double mutants are more resistant, suggesting that CBF2 is more important than CBF1 and CBF3 in cold acclimation-dependent freezing tolerance. Our results not only demonstrate that the three CBF genes together are required for cold acclimation and freezing tolerance, but also reveal that they are important for salt tolerance and seedling development. PMID:27252305

Salt Tolerance and Polyphyly in the Cyanobacterium Chroococcidiopsis (Pleurocapsales)1

NASA Technical Reports Server (NTRS)

Cumbers, John Robert; Rothschild, Lynn J.

2014-01-01

Chroococcidiopsis Geitler (Geitler 1933) is a genus of cyanobacteria containing desiccation and radiation resistant species. Members of the genus live in habitats ranging from hot and cold deserts to fresh and saltwater environments. Morphology and cell division pattern have historically been used to define the genus. To better understand the genetic and phenotypic diversity of the genus, 15 species were selected that had been previously isolated from different locations, including salt and freshwater environments. Four markers were sequenced from these 15 species, the 16S rRNA, rbcL, desC1 and gltX genes. Phylogenetic trees were generated which identified two distinct clades, a salt-tolerant clade and a freshwater clade. This study demonstrates that the genus is polyphyletic based on saltwater and freshwater phenotypes. To understand the resistance to salt in more details, species were grown on a range of sea salt concentrations which demonstrated that the freshwater species were salt-intolerant whilst the saltwater species required salt for growth. This study shows an increased resolution of the phylogeny of Chroococcidiopsis and provides further evidence that the genus is polyphyletic and should be reclassified to improve clarity in the literature.

Late Holocene Drought Variability in Eastern North America: Evidence From the Peatland Archive

NASA Astrophysics Data System (ADS)

Booth, R. K.; Jackson, S. T.

2006-12-01

conditions throughout the western Great Lakes region. These include a large drought event during the late 16th century and a series of widespread drought events between 1900-1600 BP and 1100- 700 BP. The highest magnitude droughts of the last 2000 years occurred during an interval roughly consistent with the Medieval Warm Period (MWP), with individual drought events centered on 1000 BP, 800 BP, and 700 BP. These droughts were associated with major ecological changes, including abrupt changes in vegetation and fire regime. Tree-ring records from the western United States also document a series of extensive and high-magnitude drought events during this time period, suggesting these droughts affected a large portion of mid-latitude North America. Similarly widespread drought during the last 100 years has been linked to sea surface temperature (SST) anomalies in the adjacent ocean basins, particularly an anomalously warm North Atlantic and mid-latitude Pacific, and an anomalously cold Tropical Pacific. We hypothesize that the widespread droughts apparent in our bog records were related to amplification of a similar spatial mode of moisture variability. Comparison with available proxy SST records provides some support for this hypothesis, although a more extensive network of terrestrial hydroclimate records, derived using consistent methods and proxies, needs to be used in conjunction with the developing network of proxy SST records to fully test this hypothesis.

[Physiological responses of mycorrhizal Pinus massoniana seedlings to drought stress and drought resistance evaluation].

PubMed

Wang, Yi; Ding, Gui-jie

2013-03-01

A greenhouse pot experiment was conducted to study the effects of inoculating Pisolithus tinctorius, Cenococcum geophilum, Cantharellus cibarius, and Suillus luteus on the physiological characteristics of Pinus massoniana seedlings under the conditions of drought stress and re-watering, with the drought resistance of the mycorrhizal seedlings evaluated. Under drought stress, the MDA content and membrane' s relative permeability of P. massoniana seedlings increased, but these two indices in the inoculated (mycorrhizal) seedlings were significantly lower than these in the un-inoculated (control) seedlings. After re-watering, the MDA content and membrane's relative permeability of mycorrhizal seedlings had a rapid decrease, as compared with the control. In the first 21 days of drought stress, the production rate of superoxide radical of the seedlings increased, and the SOD, POD and NR activities of mycorrhizal seedlings increased significantly. With the extending of drought stress, the seedlings after re-watering had different recovery ability. Under the re-watering after 14 days drought stress, the SOD, POD and NR activities recovered. The drought resistance of the mycorrhizal seedlings was in the order of Suillus luteus 1 > Suillus luteus 7 > Cantharellus cibarius > Cenococcum geophilum > Pisolithus tinctorius. The SOD and MDA activities had a greater correlation with the mycorrhizal seedlings drought resistance, being able to be used as the indicators to evaluate the drought resistance of mycorrhizal seedlings.

Performing drought indices to identify the relationship between agricultural losses and drought events in Spain.

NASA Astrophysics Data System (ADS)

Peña Gallardo, Marina; Serrano, Sergio Martín Vicente; Portugués Santiago, Beguería; Burguera Miquel, Tomás

2017-04-01

Drought leads to crop failures reducing the productivity. For this reason, the need of appropriate tool for recognize dry periods and evaluate the impact of drought on crop production is important. In this study, we provide an assessment of the relationship between drought episodes and crop failures in Spain as one of the direct consequences of drought is the diminishing of crop yields. First, different drought indices [the Standardized Precipitation and Evapotranspiration Index (SPEI); the Standardized Precipitation Index (SPI); the self-calibrated Palmer Moisture Anomaly Index (Z-Index), the self-calibrated Crop Moisture Index (CMI) and the Standardized Palmer Drought Index (SPDI)] have been calculated at different time scales in order to identify the dry events occurred in Spain and determine the duration and intensity of each event. Second, the drought episodes have been correlated with crop production estimated and final crop production data provided by the Spanish Crop Insurance System for the available period from 1995 to 2014 at the municipal spatial scale, with the purpose of knowing if the characteristics of the drought episodes are reflected on the agricultural losses. The analysis has been carried out in particular for two types of crop, wheat and barley. The results indicate the existence of an agreement between the most important drought events in Spain and the response of the crop productions and the proportion of hectare insurance. Nevertheless, this agreement vary depending on the drought index applied. Authors found a higher competence of the drought indices calculated at different time scales (SPEI, SPI and SPDI) identifying the begging and end of the drought events and the correspondence with the crop failures.

A quantitative analysis to objectively appraise drought indicators and model drought impacts

NASA Astrophysics Data System (ADS)

Bachmair, S.; Svensson, C.; Hannaford, J.; Barker, L. J.; Stahl, K.

2016-07-01

Drought monitoring and early warning is an important measure to enhance resilience towards drought. While there are numerous operational systems using different drought indicators, there is no consensus on which indicator best represents drought impact occurrence for any given sector. Furthermore, thresholds are widely applied in these indicators but, to date, little empirical evidence exists as to which indicator thresholds trigger impacts on society, the economy, and ecosystems. The main obstacle for evaluating commonly used drought indicators is a lack of information on drought impacts. Our aim was therefore to exploit text-based data from the European Drought Impact report Inventory (EDII) to identify indicators that are meaningful for region-, sector-, and season-specific impact occurrence, and to empirically determine indicator thresholds. In addition, we tested the predictability of impact occurrence based on the best-performing indicators. To achieve these aims we applied a correlation analysis and an ensemble regression tree approach, using Germany and the UK (the most data-rich countries in the EDII) as test beds. As candidate indicators we chose two meteorological indicators (Standardized Precipitation Index, SPI, and Standardized Precipitation Evaporation Index, SPEI) and two hydrological indicators (streamflow and groundwater level percentiles). The analysis revealed that accumulation periods of SPI and SPEI best linked to impact occurrence are longer for the UK compared with Germany, but there is variability within each country, among impact categories and, to some degree, seasons. The median of regression tree splitting values, which we regard as estimates of thresholds of impact occurrence, was around -1 for SPI and SPEI in the UK; distinct differences between northern/northeastern vs. southern/central regions were found for Germany. Predictions with the ensemble regression tree approach yielded reasonable results for regions with good impact data

The Drought Monitor.

NASA Astrophysics Data System (ADS)

Svoboda, Mark; Lecomte, Doug; Hayes, Mike; Heim, Richard; Gleason, Karin; Angel, Jim; Rippey, Brad; Tinker, Rich; Palecki, Mike; Stooksbury, David; Miskus, David; Stephens, Scott

2002-08-01

information about drought and to receive regional and local input that is in turn incorporated into the product. This paper describes the Drought Monitor and the interactive process through which it is created.

Not all droughts are created equal: the impacts of interannual drought pattern and magnitude on grassland carbon cycling.

PubMed

Hoover, David L; Rogers, Brendan M

2016-05-01

Climate extremes, such as drought, may have immediate and potentially prolonged effects on carbon cycling. Grasslands store approximately one-third of all terrestrial carbon and may become carbon sources during droughts. However, the magnitude and duration of drought-induced disruptions to the carbon cycle, as well as the mechanisms responsible, remain poorly understood. Over the next century, global climate models predict an increase in two types of drought: chronic but subtle 'press-droughts', and shorter term but extreme 'pulse-droughts'. Much of our current understanding of the ecological impacts of drought comes from experimental rainfall manipulations. These studies have been highly valuable, but are often short term and rarely quantify carbon feedbacks. To address this knowledge gap, we used the Community Land Model 4.0 to examine the individual and interactive effects of pulse- and press-droughts on carbon cycling in a mesic grassland of the US Great Plains. A series of modeling experiments were imposed by varying drought magnitude (precipitation amount) and interannual pattern (press- vs. pulse-droughts) to examine the effects on carbon storage and cycling at annual to century timescales. We present three main findings. First, a single-year pulse-drought had immediate and prolonged effects on carbon storage due to differential sensitivities of ecosystem respiration and gross primary production. Second, short-term pulse-droughts caused greater carbon loss than chronic press-droughts when total precipitation reductions over a 20-year period were equivalent. Third, combining pulse- and press-droughts had intermediate effects on carbon loss compared to the independent drought types, except at high drought levels. Overall, these results suggest that interannual drought pattern may be as important for carbon dynamics as drought magnitude and that extreme droughts may have long-lasting carbon feedbacks in grassland ecosystems. Published 2015. This article is a U

An ABA-mimicking ligand that reduces water loss and promotes drought resistance in plants

PubMed Central

Cao, Minjie; Liu, Xue; Zhang, Yan; Xue, Xiaoqian; Zhou, X Edward; Melcher, Karsten; Gao, Pan; Wang, Fuxing; Zeng, Liang; Zhao, Yang; Zhao, Yang; Deng, Pan; Zhong, Dafang; Zhu, Jian-Kang; Xu, H Eric; Xu, Yong

2013-01-01

Abscisic acid (ABA) is the most important hormone for plants to resist drought and other abiotic stresses. ABA binds directly to the PYR/PYL family of ABA receptors, resulting in inhibition of type 2C phosphatases (PP2C) and activation of downstream ABA signaling. It is envisioned that intervention of ABA signaling by small molecules could help plants to overcome abiotic stresses such as drought, cold and soil salinity. However, chemical instability and rapid catabolism by plant enzymes limit the practical application of ABA itself. Here we report the identification of a small molecule ABA mimic (AM1) that acts as a potent activator of multiple members of the family of ABA receptors. In Arabidopsis, AM1 activates a gene network that is highly similar to that induced by ABA. Treatments with AM1 inhibit seed germination, prevent leaf water loss, and promote drought resistance. We solved the crystal structure of AM1 in complex with the PYL2 ABA receptor and the HAB1 PP2C, which revealed that AM1 mediates a gate-latch-lock interacting network, a structural feature that is conserved in the ABA-bound receptor/PP2C complex. Together, these results demonstrate that a single small molecule ABA mimic can activate multiple ABA receptors and protect plants from water loss and drought stress. Moreover, the AM1 complex crystal structure provides a structural basis for designing the next generation of ABA-mimicking small molecules. PMID:23835477

The characteristics of drought occurrence in North Korea and its comparison with drought in South Korea

NASA Astrophysics Data System (ADS)

Lee, Bo-Ra; Oh, Su-Bin; Byun, Hi-Ryong

2015-07-01

The characteristics of the drought occurrence in North Korea over a period of 56 years (1952-2007) were analyzed by region, compared with those of South Korea, and graphed as a drought map for easy detection of the drought's history. To assess them, the Effective Drought Index (EDI), which was calculated from the daily precipitation data for 109 grids of the Korean Peninsula, was used. The daily precipitation data were extracted from the Asian Precipitation Highly Resolved Observational Data Integration towards Evaluation of Water Resources (APHRODITE). The characteristics of the drought occurrence in North Korea were summed up in the following five points. First, North Korea was divided into four drought sub-regions: the Northeastern region (G1), the Northern region (G2), the Central region (G3), and the Southern region (G4). Second, droughts occurred most frequently in G1 (28) and G4 (28 events) and least frequently in G3 (15 events). Third, in all sub-regions, short-term droughts lasting less than 100 days were the most frequent (53 % or higher) and the longest drought lasted 2,911 days (June 30, 1973 to June 20, 1981), which occurred in G3. Fourth, short-term droughts occurred mainly in spring, mid-term droughts (100-500 days) in spring and summer, and long-term droughts (over 500 days) in summer. Fifth, a dry period (monthly mean EDI <0) appeared in all sub-regions between 1973 and 1981 and between 1990 and 1993, and a strong negative precipitation anomaly appeared during each of these periods. When compared to the droughts in South Korea, those in North Korea were less frequent, but the mean duration was longer. Until 1979, droughts occurred almost at the same time in North Korea as South Korea, but beginning in 1980, the time differences between two regions became larger. Thus, the characteristics of the drought occurrence in North and South Korea differ.

Transcriptomic Changes of Drought-Tolerant and Sensitive Banana Cultivars Exposed to Drought Stress

PubMed Central

Muthusamy, Muthusamy; Uma, Subbaraya; Backiyarani, Suthanthiram; Saraswathi, Marimuthu Somasundaram; Chandrasekar, Arumugam

2016-01-01

In banana, drought responsive gene expression profiles of drought-tolerant and sensitive genotypes remain largely unexplored. In this research, the transcriptome of drought-tolerant banana cultivar (Saba, ABB genome) and sensitive cultivar (Grand Naine, AAA genome) was monitored using mRNA-Seq under control and drought stress condition. A total of 162.36 million reads from tolerant and 126.58 million reads from sensitive libraries were produced and mapped onto the Musa acuminata genome sequence and assembled into 23,096 and 23,079 unigenes. Differential gene expression between two conditions (control and drought) showed that at least 2268 and 2963 statistically significant, functionally known, non-redundant differentially expressed genes (DEGs) from tolerant and sensitive libraries. Drought has up-regulated 991 and 1378 DEGs and down-regulated 1104 and 1585 DEGs respectively in tolerant and sensitive libraries. Among DEGs, 15.9% are coding for transcription factors (TFs) comprising 46 families and 9.5% of DEGs are constituted by protein kinases from 82 families. Most enriched DEGs are mainly involved in protein modifications, lipid metabolism, alkaloid biosynthesis, carbohydrate degradation, glycan metabolism, and biosynthesis of amino acid, cofactor, nucleotide-sugar, hormone, terpenoids and other secondary metabolites. Several, specific genotype-dependent gene expression pattern was observed for drought stress in both cultivars. A subset of 9 DEGs was confirmed using quantitative reverse transcription-PCR. These results will provide necessary information for developing drought-resilient banana plants. PMID:27867388

Drought assessment in the Dongliao River basin: traditional approaches vs. generalized drought assessment index based on water resources systems

NASA Astrophysics Data System (ADS)

Weng, B. S.; Yan, D. H.; Wang, H.; Liu, J. H.; Yang, Z. Y.; Qin, T. L.; Yin, J.

2015-08-01

Drought is firstly a resource issue, and with its development it evolves into a disaster issue. Drought events usually occur in a determinate but a random manner. Drought has become one of the major factors to affect sustainable socioeconomic development. In this paper, we propose the generalized drought assessment index (GDAI) based on water resources systems for assessing drought events. The GDAI considers water supply and water demand using a distributed hydrological model. We demonstrate the use of the proposed index in the Dongliao River basin in northeastern China. The results simulated by the GDAI are compared to observed drought disaster records in the Dongliao River basin. In addition, the temporal distribution of drought events and the spatial distribution of drought frequency from the GDAI are compared with the traditional approaches in general (i.e., standard precipitation index, Palmer drought severity index and rate of water deficit index). Then, generalized drought times, generalized drought duration, and generalized drought severity were calculated by theory of runs. Application of said runs at various drought levels (i.e., mild drought, moderate drought, severe drought, and extreme drought) during the period 1960-2010 shows that the centers of gravity of them all distribute in the middle reaches of Dongliao River basin, and change with time. The proposed methodology may help water managers in water-stressed regions to quantify the impact of drought, and consequently, to make decisions for coping with drought.

Drought susceptibility of modern rice varieties: an effect of linkage of drought tolerance with undesirable traits

PubMed Central

Vikram, Prashant; Swamy, B. P. Mallikarjuna; Dixit, Shalabh; Singh, Renu; Singh, Bikram P.; Miro, Berta; Kohli, Ajay; Henry, Amelia; Singh, N. K.; Kumar, Arvind

2015-01-01

Green Revolution (GR) rice varieties are high yielding but typically drought sensitive. This is partly due to the tight linkage between the loci governing plant height and drought tolerance. This linkage is illustrated here through characterization of qDTY1.1, a QTL for grain yield under drought that co-segregates with the GR gene sd1 for semi-dwarf plant height. We report that the loss of the qDTY1.1 allele during the GR was due to its tight linkage in repulsion with the sd1 allele. Other drought-yield QTLs (qDTY) also showed tight linkage with traits rejected in GR varieties. Genetic diversity analysis for 11 different qDTY regions grouped GR varieties separately from traditional drought-tolerant varieties, and showed lower frequency of drought tolerance alleles. The increased understanding and breaking of the linkage between drought tolerance and undesirable traits has led to the development of high-yielding drought-tolerant dwarf lines with positive qDTY alleles and provides new hope for extending the benefits of the GR to drought-prone rice-growing regions. PMID:26458744

Operationalising resilience to drought: Multi-layered safety for flooding applied to droughts

NASA Astrophysics Data System (ADS)

Rijke, Jeroen; Smith, Jennifer Vessels; Gersonius, Berry; van Herk, Sebastiaan; Pathirana, Assela; Ashley, Richard; Wong, Tony; Zevenbergen, Chris

2014-11-01

This paper sets out a way of thinking about how to prepare for and respond to droughts in a holistic way using a framework developed for managing floods. It shows how the multi-layered safety (MLS) approach for flood resilience can be utilised in the context of drought in a way that three layers of intervention can be distinguished for operationalising drought resilience: (1) protection against water shortage through augmentation and diversification of water supplies; (2) prevention of damage in case of water shortage through increased efficiency of water use and timely asset maintenance; (3) preparedness for future water shortages through mechanisms to reduce the use of water and adopt innovative water technologies. Application of MLS to the cities of Adelaide, Melbourne and Sydney shows that recent water reforms in these cities were primarily focused on protection measures that aim to reduce the hazard source or exposure to insufficient water supplies. Prevention and preparedness measures could be considered in defining interventions that aim to further increase the drought resilience of these cities. Although further research is needed, the application suggests that MLS can be applied to the context of drought risk management. The MLS framework can be used to classify the suite of plans deployed by a city to manage future drought risks and can be considered a planning tool to identify opportunities for increasing the level of redundancy and hence resilience of the drought risk management system.

Overexpression of a Chimeric Gene, OsDST-SRDX, Improved Salt Tolerance of Perennial Ryegrass

PubMed Central

Cen, Huifang; Ye, Wenxing; Liu, Yanrong; Li, Dayong; Wang, Kexin; Zhang, Wanjun

2016-01-01

The Drought and Salt Tolerance gene (DST) encodes a C2H2 zinc finger transcription factor, which negatively regulates salt tolerance in rice (Oryza sativa). Phylogenetic analysis of six homologues of DST genes in different plant species revealed that DST genes were conserved evolutionarily. Here, the rice DST gene was linked to an SRDX domain for gene expression repression based on the Chimeric REpressor gene-Silencing Technology (CRES-T) to make a chimeric gene (OsDST-SRDX) construct and introduced into perennial ryegrass by Agrobacterium-mediated transformation. Integration and expression of the OsDST-SRDX in transgenic plants were tested by PCR and RT-PCR, respectively. Transgenic lines overexpressing the OsDST-SRDX fusion gene showed obvious phenotypic differences and clear resistance to salt-shock and to continuous salt stresses compared to non-transgenic plants. Physiological analyses including relative leaf water content, electrolyte leakage, proline content, malondialdehyde (MDA) content, H2O2 content and sodium and potassium accumulation indicated that the OsDST-SRDX fusion gene enhanced salt tolerance in transgenic perennial ryegrass by altering a wide range of physiological responses. To our best knowledge this study is the first report of utilizing Chimeric Repressor gene-Silencing Technology (CRES-T) in turfgrass and forage species for salt-tolerance improvement. PMID:27251327

Loss of ecosystem productivity with repeated drought: a multi-year experiment to assess the role of drought legacy effects

NASA Astrophysics Data System (ADS)

Smith, M. D.; Knapp, A.; Hoover, D. L.; Avolio, M. L.; Felton, A. J.; Slette, I.; Wilcox, K.

2017-12-01

Climate extremes, such as drought, are increasing in frequency and intensity, and the ecological consequences of these extreme events can be substantial and widespread. Yet, little is known about the factors that determine recovery of ecosystem function post-drought. Such knowledge is particularly important because post-drought recovery periods can be protracted depending on drought legacy effects (e.g., loss key plant populations, altered community structure and/or biogeochemical processes). These drought legacies may alter ecosystem function for many years post-drought and may impact future sensitivity to climate extremes. With forecasts of more frequent drought, there is an imperative to understand whether and how post-drought legacies will affect ecosystem response to future drought events. To address this knowledge gap, we experimentally imposed over an eight year period two extreme growing season droughts, each two years in duration followed by a two-year recovery period, in a central US grassland. We found that aboveground net primary productivity (ANPP) declined dramatically with the first drought and was accompanied by a large shift in plant species composition (loss of C3 forb and increase in C4 grasses). This drought legacy - shift in plant composition - persisted two years post-drought. Yet, despite this legacy, ANPP recovered fully. However, we expected that previously-droughted grassland would be less sensitive to a second extreme drought due to the shift in plant composition. Contrary to this expectation, previously droughted grassland experienced a greater loss in ANPP than grassland that had not experienced drought. Furthermore, previously droughted grassland did not fully recover after the second drought. Thus, the legacy of drought - a shift in plant community composition - increased ecosystem sensitivity to a future extreme drought event.

Drought Persistence in Models and Observations

NASA Astrophysics Data System (ADS)

Moon, Heewon; Gudmundsson, Lukas; Seneviratne, Sonia

2017-04-01

Many regions of the world have experienced drought events that persisted several years and caused substantial economic and ecological impacts in the 20th century. However, it remains unclear whether there are significant trends in the frequency or severity of these prolonged drought events. In particular, an important issue is linked to systematic biases in the representation of persistent drought events in climate models, which impedes analysis related to the detection and attribution of drought trends. This study assesses drought persistence errors in global climate model (GCM) simulations from the 5th phase of Coupled Model Intercomparison Project (CMIP5), in the period of 1901-2010. The model simulations are compared with five gridded observational data products. The analysis focuses on two aspects: the identification of systematic biases in the models and the partitioning of the spread of drought-persistence-error into four possible sources of uncertainty: model uncertainty, observation uncertainty, internal climate variability and the estimation error of drought persistence. We use monthly and yearly dry-to-dry transition probabilities as estimates for drought persistence with drought conditions defined as negative precipitation anomalies. For both time scales we find that most model simulations consistently underestimated drought persistence except in a few regions such as India and Eastern South America. Partitioning the spread of the drought-persistence-error shows that at the monthly time scale model uncertainty and observation uncertainty are dominant, while the contribution from internal variability does play a minor role in most cases. At the yearly scale, the spread of the drought-persistence-error is dominated by the estimation error, indicating that the partitioning is not statistically significant, due to a limited number of considered time steps. These findings reveal systematic errors in the representation of drought persistence in current

Influence of mathematical and physical background of drought indices on their complementarity and drought recognition ability

NASA Astrophysics Data System (ADS)

Frank, Anna; Armenski, Tanja; Gocic, Milan; Popov, Srdjan; Popovic, Ljiljana; Trajkovic, Slavisa

2017-09-01

The aim of this study is to test how effective and physically correct are the mathematical approaches of operational indices used by relevant National Agencies across the globe. To do so, the following indices were analysed Standardized Precipitation Index (SPI) -1, 3, 6, 12 and 24, Standardized Precipitation - Evapotranspiration Index (SPEI) - 1, 3, 6, 12 and 24, Effective Drought Index (EDI) and Index of Drying Efficiency of Air (IDEA). To make regions more comparable to each other and follow the spatial development of drought SPI index was advised by World Meteorological Organisation to be used widely by official meteorological services. The SPI and SPEI are used for Drought Early Warning in the USA, National Drought Mitigation Center and NASA, and in the EU by the European Drought Centre (EDC) and in the Balkan Region by National Meteorological Agencies. The EDI Index has wide application in Asia. In this paper four different issues were investigated: 1) how the mathematical method used in a drought indicator's computation influence drought indices' (DI) comparative analyses; 2) the sensitivity of the DIs on any change of the length of observational period; 3) similarities between the DIs time series; 4) and how accurate DIs are when compared to historical drought records. Results suggest that it is necessary to apply a few crucial changes in the Drought Monitoring and Early Warning Systems: 1) reconsider use of SPI and SPEI family indices as a measure of quality of other indices; and for Drought Early Recognition Programs 2) switch to DIs with a solid physical background, such as EDI; 3) Adopt solid physics for modelling drought processes and define the physical measure of drought, e.g. EDI and IDEA indices; 4) investigate further the IDEA index, which, supported by our study as well, is valuable for simulation of a drought process.

Salt stress induces differential regulation of the phenylpropanoid pathway in Olea europaea cultivars Frantoio (salt-tolerant) and Leccino (salt-sensitive).

PubMed

Rossi, Lorenzo; Borghi, Monica; Francini, Alessandra; Lin, Xiuli; Xie, De-Yu; Sebastiani, Luca

2016-10-01

Olive tree (Olea europaea L.) is an important crop in the Mediterranean Basin where drought and salinity are two of the main factors affecting plant productivity. Despite several studies have reported different responses of various olive tree cultivars to salt stress, the mechanisms that convey tolerance and sensitivity remain largely unknown. To investigate this issue, potted olive plants of Leccino (salt-sensitive) and Frantoio (salt-tolerant) cultivars were grown in a phytotron chamber and treated with 0, 60 and 120mM NaCl. After forty days of treatment, growth analysis was performed and the concentration of sodium in root, stem and leaves was measured by atomic absorption spectroscopy. Phenolic compounds were extracted using methanol, hydrolyzed with butanol-HCl, and quercetin and kaempferol quantified via high performance liquid-chromatography-electrospray-mass spectrometry (HPLC-ESI-MS) and HPLC-q-Time of Flight-MS analyses. In addition, the transcripts levels of five key genes of the phenylpropanoid pathway were measured by quantitative Real-Time PCR. The results of this study corroborate the previous observations, which showed that Frantoio and Leccino differ in allocating sodium in root and leaves. This study also revealed that phenolic compounds remain stable or are strongly depleted under long-time treatment with sodium in Leccino, despite a strong up-regulation of key genes of the phenylpropanoid pathway was observed. Frantoio instead, showed a less intense up-regulation of the phenylpropanoid genes but overall higher content of phenolic compounds. These data suggest that Frantoio copes with the toxicity imposed by elevated sodium not only with mechanisms of Na + exclusion, but also promptly allocating effective and adequate antioxidant compounds to more sensitive organs. Copyright © 2016 Elsevier GmbH. All rights reserved.

Results of Large Area Crop Inventory Experiment (LACIE) drought analysis (South Dakota drought 1976)

NASA Technical Reports Server (NTRS)

Thompson, D. R.

1976-01-01

LACIE using techniques developed from the southern Great Plains drought analysis indicated the potential for drought damage in South Dakota. This potential was monitored and as it became apparent that a drought was developing, LACIE implemented some of the procedures used in the southern Great Plains drought. The technical approach used in South Dakota involved the normal use of LACIE sample segments (5 x 6 nm) every 18 days. Full frame color transparencies (100 x 100 nm) were used on 9 day intervals to identify the drought area and to track overtime. The green index number (GIN) developed using the Kauth transformation was computed for all South Dakota segments and selected North Dakota segments. A scheme for classifying segments as drought affected or not affected was devised and tested on all available 1976 South Dakota data. Yield model simulations were run for all CRD's Crop Reporting District) in South Dakota.

Drought - A Global Assessment

NASA Astrophysics Data System (ADS)

Lackner, S.; Barnwal, P.; von der Goltz, J.

2013-12-01

We investigate the lasting effects of early childhood exposure to drought on economic and health outcomes in a large multi-country dataset. By pooling all Demographic and Health Survey rounds for which household geocodes are available, we obtain an individual-level dataset covering 47 developing countries. Among other impact measures, we collect infant and child mortality data from 3.3m live births and data on stunting and wasting for 1.2m individuals, along with data on education, employment, wealth, marriage and childbearing later in life for similarly large numbers of respondents. Birth years vary from 1893 to 2012. We seek to improve upon existing work on the socio-economic impact of drought in a number of ways. First, we introduce from the hydrological literature a drought measure, the Standardized Precipitation Index (SPI), that has been shown to closely proxy the Palmer drought index, but has far less demanding data requirements, and can be obtained globally and for long time periods. We estimate the SPI for 110 years on a global 0.5° grid, which allows us to assign drought histories to the geocoded individual data. Additionally, we leverage our large sample size to explicitly investigate both how drought impacts have changed over time as adaptation occurred at a varying pace in different locations, and the role of the regional extent of drought in determining impacts.

Not all droughts are created equal: The impacts of interannual drought pattern and magnitude on grassland carbon cycling

USGS Publications Warehouse

Hoover, David L.; Rogers, Brendan M.

2016-01-01

Climate extremes, such as drought, may have immediate and potentially prolonged effects on carbon cycling. Grasslands store approximately one-third of all terrestrial carbon and may become carbon sources during droughts. However, the magnitude and duration of drought-induced disruptions to the carbon cycle, as well as the mechanisms responsible, remain poorly understood. Over the next century, global climate models predict an increase in two types of drought: chronic but subtle ‘press-droughts’, and shorter term but extreme ‘pulse-droughts’. Much of our current understanding of the ecological impacts of drought comes from experimental rainfall manipulations. These studies have been highly valuable, but are often short term and rarely quantify carbon feedbacks. To address this knowledge gap, we used the Community Land Model 4.0 to examine the individual and interactive effects of pulse- and press-droughts on carbon cycling in a mesic grassland of the US Great Plains. A series of modeling experiments were imposed by varying drought magnitude (precipitation amount) and interannual pattern (press- vs. pulse-droughts) to examine the effects on carbon storage and cycling at annual to century timescales. We present three main findings. First, a single-year pulse-drought had immediate and prolonged effects on carbon storage due to differential sensitivities of ecosystem respiration and gross primary production. Second, short-term pulse-droughts caused greater carbon loss than chronic press-droughts when total precipitation reductions over a 20-year period were equivalent. Third, combining pulse- and press-droughts had intermediate effects on carbon loss compared to the independent drought types, except at high drought levels. Overall, these results suggest that interannual drought pattern may be as important for carbon dynamics as drought magnitude and that extreme droughts may have long-lasting carbon feedbacks in grassland ecosystems.

The extreme drought episode of August 2011-May 2012: A scenario for future droughts in Central Europe?

NASA Astrophysics Data System (ADS)

Zahradníček, P.; Trnka, M.; Brázdil, R.; Mozny, M.; Stepanek, P.; Hlavinka, P.; Malý, A.; Dubrovsky, M.

2014-12-01

The weather conditions from August 2011 to May 2012 produced an extreme drought in the eastern Czech Republic (Moravia), whereas the patterns were nearly normal in its western region (Bohemia). The Southern and Central Moravia regions, which represent the most important agricultural areas, were most affected by the drought. The precipitation totals for the studied period were 50% to 70% of the long-term mean, which was calculated for 1961-2000. In autumn 2011, the total precipitation accounted for 10% to 30% of the long-term mean for most of Moravia, increasing to 30% to 50% in spring 2012. Moreover, 7.5% of the Czech Republic experienced a 100-year drought; 20% of the country experienced a 20-year drought. According to the Palmer Drought Severity Index, the 2012 drought was classified as the worst in the past 130 years. The drought patterns were related to the prevailing high-pressure systems over Central Europe and the occurrence of weather types with different precipitation amounts in Bohemia and Moravia. The most substantial drought effects occurred in the agricultural sector. A decrease in cereal yields was observed in the analyzed production areas in Moravia, which was unprecedented in the past 52 years. Moreover, winter crops were affected more than spring crops. An increased risk of fire occurred due to the drought conditions; the largest forest fire in the past 15 years was recorded during this period. Furthermore, signs of hydrological drought were also reported in rivers. The 2011-2012 drought was compared with the significant droughts in 2000, 2003 and 2007. Austria and Slovakia, which neighbor the Czech Republic, experienced a similar drought. This drought analysis can be used as a scenario for future droughts and their impacts in Central Europe due to the global warming projected by GCMs.Acknowledgements:This study was made possible by the generous support of the "Establishment of International Scientific Team Focused on Drought Research" project (no

Restoring Ecological Function to a Submerged Salt Marsh

USGS Publications Warehouse

Stagg, C.L.; Mendelssohn, I.A.

2010-01-01

Impacts of global climate change, such as sea level rise and severe drought, have altered the hydrology of coastal salt marshes resulting in submergence and subsequent degradation of ecosystem function. A potential method of rehabilitating these systems is the addition of sediment-slurries to increase marsh surface elevation, thus ameliorating effects of excessive inundation. Although this technique is growing in popularity, the restoration of ecological function after sediment addition has received little attention. To determine if sediment subsidized salt marshes are functionally equivalent to natural marshes, we examined above- and belowground primary production in replicated restored marshes receiving four levels of sediment addition (29-42 cm North American Vertical Datum of 1988 [NAVD 88]) and in degraded and natural ambient marshes (4-22 cm NAVD 88). Moderate intensities of sediment-slurry addition, resulting in elevations at the mid to high intertidal zone (29-36 cm NAVD 88), restored ecological function to degraded salt marshes. Sediment additions significantly decreased flood duration and frequency and increased bulk density, resulting in greater soil drainage and redox potential and significantly lower phytotoxic sulfide concentrations. However, ecological function in the restored salt marsh showed a sediment addition threshold that was characterized by a decline in primary productivity in areas of excessive sediment addition and high elevation (>36 cm NAVD 88). Hence, the addition of intermediate levels of sediment to submerging salt marshes increased marsh surface elevation, ameliorated impacts of prolonged inundation, and increased primary productivity. However, too much sediment resulted in diminished ecological function that was equivalent to the submerged or degraded system. ?? 2010 Society for Ecological Restoration International.

Advancing Drought Understanding, Monitoring and Prediction

NASA Technical Reports Server (NTRS)

Mariotti, Annarita; Schubert, Siegfried D.; Mo, Kingtse; Peters-Lidard, Christa; Wood, Andy; Pulwarty, Roger; Huang, Jin; Barrie, Dan

2013-01-01

Having the capacity to monitor droughts in near-real time and providing accurate drought prediction from weeks to seasons in advance can greatly reduce the severity of social and economic damage caused by drought, a leading natural hazard for North America. The congressional mandate to establish the National Integrated Drought Information System (NIDIS; Public Law 109-430) in 2006 was a major impulse to develop, integrate, and provide drought information to meet the challenges posed by this hazard. Significant progress has been made on many fronts. On the research front, efforts by the broad scientific community have resulted in improved understanding of North American droughts and improved monitoring and forecasting tools. We now have a better understanding of the droughts of the twentieth century including the 1930s "Dust Bowl"; we have developed a broader array of tools and datasets that enhance the official North American Drought Monitor based on different methodologies such as state-of-the-art land surface modeling (e.g., the North American Land Data Assimilation System) and remote sensing (e.g., the evaporative stress index) to better characterize the occurrence and severity of drought in its multiple manifestations. In addition, we have new tools for drought prediction [including the new National Centers for Environmental Prediction (NCEP) Climate Forecast System, version 2, for operational prediction and an experimental National Multimodel Ensemble] and have explored diverse methodologies including ensemble hydrologic prediction approaches. Broad NIDIS-inspired progress is influencing the development of a Global Drought Information System (GDIS) under the auspices of the World Climate Research Program. Despite these advances, current drought monitoring and forecasting capabilities still fall short of users' needs, especially the need for skillful and reliable drought forecasts at regional and local scales. To tackle this outstanding challenging problem

Two types of flash drought over China and their connections with sub-seasonal to seasonal soil moisture drought

NASA Astrophysics Data System (ADS)

Wang, L.; Yuan, X.; Xie, Z.

2017-12-01

Flash drought has been receiving attention recently due to its rapid development and vast damage on crops in the growing season. Accompanied with heatwave and rainfall deficit, the soil moisture decreased rapidly in a short time and may lead to the failure of root water uptake and large-scale crops wither. There are two types of flash droughts according to the causes (Mo and Lettenmaier, 2016), i.e., heat wave flash drought and rainfall deficit flash drought. Here, based on pentad-mean surface air temperature and precipitation observations from over two thousand meteorological stations as well as soil moisture and ET estimations from three global reanalysis products, the characteristics and evolution of the two types of flash droughts over China are being explored. Heat wave flash drought is more likely to occur in humid and semi-humid areas, such as southern China, while rainfall deficit flash drought is more likely to occur in northern China. Unlike the traditional drought that persists for a few months to decades, the mean durations of both types of flash droughts are very short. We use monthly mean soil moisture to calculate sub-seasonal to seasonal (S2S) soil moisture drought, and compare its characteristics and preferred conditions such as the large-scale atmospheric circulation and oceanic anomaly for both types of flash droughts. The percentages of flash drought in different periods of S2S drought are also being explored to see the potential relationship between flash drought and S2S drought over different regions.

Flooding During Drought: Learning from Stakeholder Engagement & Partner Coordination in the California-Nevada Drought Early Warning System (DEWS)

NASA Astrophysics Data System (ADS)

Sheffield, A. M.

2017-12-01

After more than 5 years of drought, extreme precipitation brought drought relief in California and Nevada and presents an opportunity to reflect upon lessons learned while planning for the future. NOAA's National Integrated Drought Information System (NIDIS) California-Nevada Drought Early Warning System (DEWS) in June 2017 convened a regional coordination workshop to provide a forum to discuss and build upon past drought efforts in the region and increase coordination, collaboration and information sharing across the region as a whole. Participants included federal, tribal, state, academic, and local partners who provided a post-mortem on the recent drought and impacts as well as recent innovations in drought monitoring, forecasts, and decision support tools in response to the historic drought. This presentation will highlight lessons learned from stakeholder outreach and engagement around flooding during drought, and pathways for moving forward coordination and collaboration in the region. Additional focus will be on the potential opportunities from examining California decision making calendars from this drought. Identified gaps and challenges will also be shared, such as the need to connect observations with social impacts, capacity building around available tools and resources, and future drought monitoring needs. Drought will continue to impact California and Nevada, and the CA-NV DEWS works to make climate and drought science readily available, easily understandable and usable for decision makers; and to improve the capacity of stakeholders to better monitor, forecast, plan for and cope with the impacts of drought.

The defensive role of silicon in wheat against stress conditions induced by drought, salinity or cadmium.

PubMed

Alzahrani, Yahya; Kuşvuran, Alpaslan; Alharby, Hesham F; Kuşvuran, Sebnem; Rady, Mostafa M

2018-06-15

In the crust of earth, silicon (Si) is one of the two major elements. For plant growth and development, importance of Si remains controversial due to the widely differences in ability of plants to take up this element. In this paper, pot experiments were done to study Si roles in improving salt, drought or cadmium (Cd) stress tolerance in wheat. Up to full emergence, all pots were watered at 100% field capacity (FC) every other day with nutrient solution without any treatments. Fifteen days after sowing, pots were divided into four plots, each with 40 pots for no stress (control) and three stress treatments; drought (50% FC), salinity (200 mM NaCl) and cadmium (2 mM Cd). For all plots, Si was applied at four levels (0, 2, 4 and 6 mM). Under no stress condition, Si applications increased Si content and improved growth as a result of reduced electrolyte leakage (EL), malondialdehyde (MDA) and Na + contents. Under stress conditions, Si supplementation conferred higher growth, gas exchange, tissue water and membranes stabilities, and K + content, and had limited MDA and Na + contents and EL compared to those obtained without Si. Compared to those without Si, enzyme (e.g., superoxide dismutase, catalase and peroxidase) activity was improved by Si applications, which were linked with elevated antioxidants and osmoprotectants (e.g., free proline, soluble sugars, ascorbic acid and glutathione) contents, might providing antioxidant defense against abiotic stress in wheat. The level of 4 mM Si was most effective for mitigating the salt and drought stress conditions, while 6 mM Si level was most influentially for alleviating the Cd stress condition. These results suggest that Si is beneficial in remarkably affecting physiological phenomena and improving wheat growth under abiotic stress. Copyright © 2018 Elsevier Inc. All rights reserved.

Climate and drought

NASA Astrophysics Data System (ADS)

McNab, Alan L.

Drought is a complex phenomenon that can be defined from several perspectives [Wilhite and Glantz, 1987]. The common characteristic and central idea of these perspectives is the straightforward notion of a water deficit. Complexity arises because of the need to specify the part of the hydrologic cycle experiencing the deficit and the associated time period. For example, a long-term deficit in deep groundwater storage can occur simultaneously with a short-term surplus of root zone soil water.Figure 1 [Changnon, 1987] illustrates how the definitions of drought are related to specific components of the hydrologic cycle. The dashed lines indicate the delayed translation of two hypothetical precipitation deficits with respect to runoff, soil moisture, streamflow and groundwater. From this perspective, precipitation can be considered as the carrier of the drought signal, and hydrological processes are among the final indicators that reveal the presence of drought [Hare, 1987; Klemes, 1987].

Climate, Tree Growth, Forest Drought Stress, and Tree Mortality in Forests of Western North America: Long-Term Patterns and Recent Trends

NASA Astrophysics Data System (ADS)

Allen, C. D.; Williams, P.

2012-12-01

Ongoing climate changes are increasingly affecting the world's forests, particularly including high latitude and high elevation coniferous forests. Although forest growth has improved in some regions due to greater growing season length and warmth (perhaps along with increased atmospheric CO2 or N), large growth declines or increased mortality from droughts or hotter temperatures also are being observed. We present and interpret information on regional variation in climate-tree growth relationships and trends, and on patterns and trends of climate-related forest disturbances, from western North America. From 235 tree-ring chronologies in the Southwest US we show that tree-ring growth records from warmer southwestern sites are more sensitive to temperature than tree-ring growth records from cooler southwestern sites. Assessment of 59 tree-ring records from 11 species in the Cascade Mountains of the Pacific Northwest shows that trees growing in cool places respond positively to increased temperature and trees in warm places respond negatively, implying that trees historically not sensitive to temperature may become sensitive as mean temperatures warm. An analysis of 59 white spruce populations in Alaska supports the hypothesis that warming has caused tree growth to lose sensitivity to cold temperatures. Comparing ring widths to temperature during just the coldest 50% of years during the 20th century, tree growth was sensitive to cold temperatures, and this effect was strongest at the coldest sites; whereas during the warmest 50% of years, trees were not at all sensitive to cold temperatures, even at the cold sites. Drought and vapor pressure deficit are among the variables that emerge as being increasingly important to these Alaska boreal forests as mean temperatures rise. Most recently, from 346 tree-ring chronologies in the Southwest US we establish a tree-ring-based Forest Drought Stress Index (FDSI) for the three most widespread conifer species (Pinus edulis

Drought in the southeast

Treesearch

Stacy Clark; Martin Spetich; Zander Evans

2008-01-01

A historic drought gripped the Southeast region in 2007. It was the second driest year on record for the region, and rainfall in some areas including Alabama and North Carolina was the lowest on record for the last century. By the end of 2007, over a third of the region was classified in "exceptional" drought (the worst drought designation used by the U.S....

Land-atmosphere interaction and disaster-causing process of drought in northern China: observation and experiment (DroughtPEX_China)

NASA Astrophysics Data System (ADS)

Li, Yaohui

2017-04-01

Drought is one of the most common and frequent nature disasters in the world, particularly in China under the continental monsoonal climate with great variation. About thirty percent of economic loss caused by natural disasters is contributed by droughts in China, which is by far the most damaging weather disasters because of its long duration and extensive hazard areas. Droughts not only have a serious impact on the agriculture, water resources, ecology, natural environment, but also seriously affect the socio-economic such as human health, energy and transportation. Worsely, under the background of climate change, droughts in show increases in frequency, duration and scope in many places around the world, particularly northern China. Nowadays, droughts have aroused extensive concern of the scientists, governments and international community, and became one of the important scientific issues in geoscience research. However, most of researches on droughts in China so far were focused on the causes or regulars of one type of droughts (the atmosphere, agriculture or hydrological) from the perspective of the atmospheric circulation anomalies. Few of them considered a whole cycle of the drought-forming process from atmosphere-land interaction to agricultural/ecological one in terms of the land-atmosphere interaction; meanwhile, the feedback mechanism with the drought and land-atmosphere interaction is still unclear as well. All of them is because of lack of the relevant comprehensive observation experiment. "Land-atmosphere interaction and disaster-causing process of drought in northern China: observation and experiment" (DroughtPEX_China)is just launched in this requirement and background. DroughtPEX_China is supported by Special Scientific Research Fund of Public Welfare Industry (Meteorological) of China (Grant No.GYHY201506001)—"Drought Meteorology Scientific Research Project—the disaster-causing process and mechanism of drought in northern China". This project

Selection for Improved Energy Use Efficiency and Drought Tolerance in Canola Results in Distinct Transcriptome and Epigenome Changes.

PubMed

Verkest, Aurine; Byzova, Marina; Martens, Cindy; Willems, Patrick; Verwulgen, Tom; Slabbinck, Bram; Rombaut, Debbie; Van de Velde, Jan; Vandepoele, Klaas; Standaert, Evi; Peeters, Marrit; Van Lijsebettens, Mieke; Van Breusegem, Frank; De Block, Marc

2015-08-01

To increase both the yield potential and stability of crops, integrated breeding strategies are used that have mostly a direct genetic basis, but the utility of epigenetics to improve complex traits is unclear. A better understanding of the status of the epigenome and its contribution to agronomic performance would help in developing approaches to incorporate the epigenetic component of complex traits into breeding programs. Starting from isogenic canola (Brassica napus) lines, epilines were generated by selecting, repeatedly for three generations, for increased energy use efficiency and drought tolerance. These epilines had an enhanced energy use efficiency, drought tolerance, and nitrogen use efficiency. Transcriptome analysis of the epilines and a line selected for its energy use efficiency solely revealed common differentially expressed genes related to the onset of stress tolerance-regulating signaling events. Genes related to responses to salt, osmotic, abscisic acid, and drought treatments were specifically differentially expressed in the drought-tolerant epilines. The status of the epigenome, scored as differential trimethylation of lysine-4 of histone 3, further supported the phenotype by targeting drought-responsive genes and facilitating the transcription of the differentially expressed genes. From these results, we conclude that the canola epigenome can be shaped by selection to increase energy use efficiency and stress tolerance. Hence, these findings warrant the further development of strategies to incorporate epigenetics into breeding. © 2015 American Society of Plant Biologists. All Rights Reserved.

Monitoring of Drought Events in Gorontalo Regency

NASA Astrophysics Data System (ADS)

Koem, S.; Rusiyah

2017-12-01

Gorontalo Regency is a region vulnerable to drought. Drought is one of meteorological disaster because it tends to bring negative impact on various sectors. This study used rainfall data from 1981 to 2016 (35 years). The research employed Standardized Precipitation Index (SPI) to monitor and calculate the level of drought from the duration, intensity, and frequency in different time scales. The SPI value was calculated using the DrinC and ArcGIS software is used to create drought spatial distribution maps. The mean intensity of drought simultaneously followed the drought magnitude in Bilato station. The peak of drought in SPI-3 occurs in 1982, 2009 and 2016. In 1982, about 76.5% of the stations showed that the peak of drought events for SPI-3 in October to December. Moreover, 94% of the stations reveals that the peak of drought events for SPI-6 occur in July to December 1982. This shows that drought in 1982 was more severe than other years in the last three decades. Linear trends of drought for the period of 1981 to 2016 in most stations show an increasing trend, hence, it can be concluded that Gorontalo Regency experienced an increase in the wet period. Changes in time-scale caused the tendency for a high number of dry period frequencies. Drought spatial distribution could be used to determine the priority plans in finding the solutions due to droughts that occur in drought-vulnerable areas. Drought analysis using SPI could contribute to the decision-making in the future as an effort to minimize the impact of drought.

Assessment of Drought Scenario in Western Nepal

NASA Astrophysics Data System (ADS)

Pandey, V. P.; Khatiwada, K. R.

2017-12-01

Drought is a frequent phenomenon in relatively drier western Nepal. Lack of hydro-climatic information with wider spatial coverage is hindering effective assessment of the drought events. Furthermore, drought assessment is not getting adequate attention in Nepal. This study aims to develop drought scenario for Western Nepal by evaluating various types of drought indices in Karnali River Basin (area = 4,6150 km2) and recommend the most suited set of indices for data-poor regions. On the climatic data at ten stations, drought indices were calculated from following seven selected indices: Standardized Precipitation Index (SPI), Standardized Precipitation Evapotranspiration Index (SPEI), Palmer Drought Severity Index (PDSI), (self-calibrating) Palmer Drought Severity Index (scPDSI), Reconnaissance Drought Index (RDI), Standardized Streamflow Index (SSFI), and Palmer Hydrological Drought Index (PHDI). Initial results reflect that the basin is affected by severe meteorological drought. Most of the indices show the extreme dryness scenario during the years 1984-85, 1992-93, 1995, 2000, 20002, 2008-09, and 2012. The results from the stations with long-term temperature and precipitation data sets showed a higher (up to 0.9) correlation between SPI and RDI than for SPEI and other Palmer Drought Indices, which ranged from 0.6 to 0.8 only. This suggests ability of SPI to represent magnitude and duration of the drought events fairly well in the study basin, and therefore, has potential to represent drought dynamics in data-poor regions. Keywords: Drought; Karnali River Basin; Nepal Himalaya

Dzuds, droughts, and livestock mortality in Mongolia

NASA Astrophysics Data System (ADS)

Palat Rao, Mukund; Davi, Nicole K.; D'Arrigo, Rosanne D.; Skees, Jerry; Nachin, Baatarbileg; Leland, Caroline; Lyon, Bradfield; Wang, Shih-Yu; Byambasuren, Oyunsanaa

2015-07-01

Recent incidences of mass livestock mortality, known as dzud, have called into question the sustainability of pastoral nomadic herding, the cornerstone of Mongolian culture. A total of 20 million head of livestock perished in the mortality events of 2000-2002, and 2009-2010. To mitigate the effects of such events on the lives of herders, international agencies such as the World Bank are taking increasing interest in developing tailored market-based solutions like index-insurance. Their ultimate success depends on understanding the historical context and underlying causes of mortality. In this paper we examine mortality in 21 Mongolian aimags (provinces) between 1955 and 2013 in order to explain its density independent cause(s) related to climate variability. We show that livestock mortality is most strongly linked to winter (November-February) temperatures, with incidences of mass mortality being most likely to occur because of an anomalously cold winter. Additionally, we find prior summer (July-September) drought and precipitation deficit to be important triggers for mortality that intensifies the effect of upcoming winter temperatures on livestock. Our density independent mortality model based on winter temperature, summer drought, summer precipitation, and summer potential evaporanspiration explains 48.4% of the total variability in the mortality dataset. The Mongolian index based livestock insurance program uses a threshold of 6% mortality to trigger payouts. We find that on average for Mongolia, the probability of exceedance of 6% mortality in any given year is 26% over the 59 year period between 1955 and 2013.

Evaluation of drought using SPEI drought class transitions and log-linear models for different agro-ecological regions of India

NASA Astrophysics Data System (ADS)

Alam, N. M.; Sharma, G. C.; Moreira, Elsa; Jana, C.; Mishra, P. K.; Sharma, N. K.; Mandal, D.

2017-08-01

Markov chain and 3-dimensional log-linear models were attempted to model drought class transitions derived from the newly developed drought index the Standardized Precipitation Evapotranspiration Index (SPEI) at a 12 month time scale for six major drought prone areas of India. Log-linear modelling approach has been used to investigate differences relative to drought class transitions using SPEI-12 time series derived form 48 yeas monthly rainfall and temperature data. In this study, the probabilities of drought class transition, the mean residence time, the 1, 2 or 3 months ahead prediction of average transition time between drought classes and the drought severity class have been derived. Seasonality of precipitation has been derived for non-homogeneous Markov chains which could be used to explain the effect of the potential retreat of drought. Quasi-association and Quasi-symmetry log-linear models have been fitted to the drought class transitions derived from SPEI-12 time series. The estimates of odds along with their confidence intervals were obtained to explain the progression of drought and estimation of drought class transition probabilities. For initial months as the drought severity increases the calculated odds shows lower value and the odds decreases for the succeeding months. This indicates that the ratio of expected frequencies of occurrence of transition from drought class to the non-drought class decreases as compared to transition to any drought class when the drought severity of the present class increases. From 3-dimensional log-linear model it is clear that during the last 24 years the drought probability has increased for almost all the six regions. The findings from the present study will immensely help to assess the impact of drought on the gross primary production and to develop future contingent planning in similar regions worldwide.

A Comparison of Satellite Data-Based Drought Indicators in Detecting the 2012 Drought in the Southeastern US

NASA Technical Reports Server (NTRS)

Yagci, Ali Levent; Santanello, Joseph A.; Rodell, Matthew; Deng, Meixia; Di, Liping

2018-01-01

The drought of 2012 in the North America devastated agricultural crops and pastures, further damaging agriculture and livestock industries and leading to great losses in the economy. The drought maps of the United States Drought Monitor (USDM) and various drought monitoring techniques based on the data collected by the satellites orbiting in space such as the Gravity Recovery and Climate Experiment (GRACE) and the Moderate Resolution Imaging Spectroradiometer (MODIS) are inter-compared during the 2012 drought conditions in the southeastern United States. The results indicated that spatial extent of drought reported by USDM were in general agreement with those reported by the MODIS-based drought maps. GRACE-based drought maps suggested that the southeastern US experienced widespread decline in surface and root-zone soil moisture and groundwater resources. Disagreements among all drought indicators were observed over irrigated areas, especially in Lower Mississippi region where agriculture is mainly irrigated. Besides, we demonstrated that time lag of vegetation response to changes in soil moisture and groundwater partly contributed to these disagreements, as well.

Forest biogeochemistry in response to drought.

PubMed

Schlesinger, William H; Dietze, Michael C; Jackson, Robert B; Phillips, Richard P; Rhoades, Charles C; Rustad, Lindsey E; Vose, James M

2016-07-01

Trees alter their use and allocation of nutrients in response to drought, and changes in soil nutrient cycling and trace gas flux (N2 O and CH4 ) are observed when experimental drought is imposed on forests. In extreme droughts, trees are increasingly susceptible to attack by pests and pathogens, which can lead to major changes in nutrient flux to the soil. Extreme droughts often lead to more common and more intense forest fires, causing dramatic changes in the nutrient storage and loss from forest ecosystems. Changes in the future manifestation of drought will affect carbon uptake and storage in forests, leading to feedbacks to the Earth's climate system. We must improve the recognition of drought in nature, our ability to manage our forests in the face of drought, and the parameterization of drought in earth system models for improved predictions of carbon uptake and storage in the world's forests. © 2015 John Wiley & Sons Ltd.

Drought and Fire in the Western United States: Contrasting the Causes, Distributions, and Effects of Drought in the 20th and 21st Centuries with a Multiyear Moisture Deficit Drought Index

NASA Astrophysics Data System (ADS)

Crockett, J.; Westerling, A. L.

2016-12-01

The current drought in California is considered to be most severe drought event of the 20th and 21st century. Climate models forecast increasing temperatures in the Western United States but are less certain regarding precipitation patterns. Here we impose a novel index based on sustained, multiyear moisture deficit anomalies onto a 1/8° grid of the Western United States to investigate 1) whether California's drought is irregular in the recent history of the Western States; 2) how temperature and precipitation affected the development of large drought events; and 3) what impact did drought events have on burn area and severity of fires. Fire records were compiled from the Monitoring Trends in Burn Severity database and compared to drought events since 1984. Results indicate that drought events similar in size and duration to the current drought have occurred in the West since 1918, though previous drought events were not as severe nor centered on California. Six drought events of similar size to the 2012 - 2014 drought were compared: while they were characterized by negative precipitation anomalies, only the 2012 - 2014 event exhibited temperature anomalies that increased over the drought's duration. In addition, we found that large fires ( > 1000 acres) within drought areas had greater total area burned as well as area burned at medium and high severities compared to fires in non-drought areas. Our results suggest that though uncertainty of future precipitation patterns exists, increasing temperatures will exacerbate drought severity when events do occur. In addition, understanding the relationships between droughts and fire can guide land managers to more effective fire management during drought events.

Arbuscular Mycorrhizal Symbiosis Modulates Antioxidant Response and Ion Distribution in Salt-Stressed Elaeagnus angustifolia Seedlings.

PubMed

Chang, Wei; Sui, Xin; Fan, Xiao-Xu; Jia, Ting-Ting; Song, Fu-Qiang

2018-01-01

Elaeagnus angustifolia L. is a drought-resistant species. Arbuscular mycorrhizal symbiosis is considered to be a bio-ameliorator of saline soils that can improve salinity tolerance in plants. The present study investigated the effects of inoculation with the arbuscular mycorrhizal fungus Rhizophagus irregularis on the biomass, antioxidant enzyme activities, and root, stem, and leaf ion accumulation of E. angustifolia seedlings grown during salt stress conditions. Salt-stressed mycorrhizal seedlings produced greater root, stem, and leaf biomass than the uninoculated stressed seedlings. In addition, the seedlings colonized by R. irregularis showed notably higher activities of superoxide dismutase (SOD), catalase (CAT), and ascorbate peroxidase (APX) in the leaves of the mycorrhizal seedlings in response to salinity compared to those of the non-mycorrhizal seedlings. Mycorrhizal seedlings not only significantly increased their ability to acquire K + , Ca 2+ , and Mg 2+ , but also maintained higher K + :Na + ratios in the leaves and lower Ca 2+ :Mg 2+ ratios than non-mycorrhizal seedlings during salt stress. These results suggest that the salt tolerance of E. angustifolia seedlings could be enhanced by R. irregularis. The arbuscular mycorrhizal symbiosis could be a promising method to restore and utilize salt-alkaline land in northern China.

A Framework for Drought Risk Management

NASA Astrophysics Data System (ADS)

Apurv, T.; Cai, X.

2016-12-01

Drought is one of the most expensive natural disasters as it affects many sectors of the economy. The threat posed by droughts is expected to further increase due to increasing water demands fuelled by increasing population and also due to climate change in many regions. Management of the increasing drought risk requires shift from traditional crisis management approaches to long term strategic planning for reduction of drought risk. This study proposes a framework for management of long term drought risk. The framework uses the system based approach proposed by Tsakiris et al. (2013), in which a watershed is considered as a system and different water sources in the watershed (like groundwater, reservoirs, streams etc.) are considered as subsystems associated with certain water requirements of different sectors. Droughts are defined separately for each subsystem considering water availability and requirement. The percentile based drought indicator framework proposed by Steinemann et al. (2015) is used for defining drought for each subsystem, allowing the selection of thresholds, variables of interest, and time scale which are most relevant for stakeholders dependent on a particular subsystem. Future drought risk under different drought management strategies are assessed using hydrologic models that model both hydrologic and human components of a watershed. The robustness of a management strategy is assessed by simulating system response across a wide range of stochastically generated future climate scenarios. The framework is useful for operational drought management as it allows direct management of drought risks with consideration of different water sources and water users. Steinemann, A., Iacobellis, S.F., Cayan, D.R., (2015) "Developing and evaluating drought indicators for decision-making" J. Hydrometeor. 16 (4), 1793-1803 Tsakiris, G, Nalbantis, I, Vangelis, H, Verbeiren, B, Huysmans, M, Tychon, B, Jacquemin, I, Canters, F, Vanderhaegen, S, Engelen, G

33 CFR 203.62 - Drought assistance.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 3 2011-07-01 2011-07-01 false Drought assistance. 203.62... Supplies: Contaminated Water Sources and Drought Assistance § 203.62 Drought assistance. (a) Authority. The... political subdivisions, within areas determined to be drought-distressed. (b) General policy. (1) It is a...

33 CFR 203.62 - Drought assistance.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 3 2013-07-01 2013-07-01 false Drought assistance. 203.62... Supplies: Contaminated Water Sources and Drought Assistance § 203.62 Drought assistance. (a) Authority. The... political subdivisions, within areas determined to be drought-distressed. (b) General policy. (1) It is a...

33 CFR 203.62 - Drought assistance.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 3 2012-07-01 2012-07-01 false Drought assistance. 203.62... Supplies: Contaminated Water Sources and Drought Assistance § 203.62 Drought assistance. (a) Authority. The... political subdivisions, within areas determined to be drought-distressed. (b) General policy. (1) It is a...

33 CFR 203.62 - Drought assistance.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 3 2014-07-01 2014-07-01 false Drought assistance. 203.62... Supplies: Contaminated Water Sources and Drought Assistance § 203.62 Drought assistance. (a) Authority. The... political subdivisions, within areas determined to be drought-distressed. (b) General policy. (1) It is a...

Novel NAC Transcription Factor TaNAC67 Confers Enhanced Multi-Abiotic Stress Tolerances in Arabidopsis

PubMed Central

Mao, Xinguo; Chen, Shuangshuang; Li, Ang; Zhai, Chaochao; Jing, Ruilian

2014-01-01

Abiotic stresses are major environmental factors that affect agricultural productivity worldwide. NAC transcription factors play pivotal roles in abiotic stress signaling in plants. As a staple crop, wheat production is severely constrained by abiotic stresses whereas only a few NAC transcription factors have been characterized functionally. To promote the application of NAC genes in wheat improvement by biotechnology, a novel NAC gene designated TaNAC67 was characterized in common wheat. To determine its role, transgenic Arabidopsis overexpressing TaNAC67-GFP controlled by the CaMV-35S promoter was generated and subjected to various abiotic stresses for morphological and physiological assays. Gene expression showed that TaNAC67 was involved in response to drought, salt, cold and ABA treatments. Localization assays revealed that TaNAC67 localized in the nucleus. Morphological analysis indicated the transgenics had enhanced tolerances to drought, salt and freezing stresses, simultaneously supported by enhanced expression of multiple abiotic stress responsive genes and improved physiological traits, including strengthened cell membrane stability, retention of higher chlorophyll contents and Na+ efflux rates, improved photosynthetic potential, and enhanced water retention capability. Overexpression of TaNAC67 resulted in pronounced enhanced tolerances to drought, salt and freezing stresses, therefore it has potential for utilization in transgenic breeding to improve abiotic stress tolerance in crops. PMID:24427285

Phenotyping bananas for drought resistance

PubMed Central

Ravi, Iyyakkutty; Uma, Subbaraya; Vaganan, Muthu Mayil; Mustaffa, Mohamed M.

2012-01-01

Drought has emerged as one of the major constraints in banana production. Its effects are pronounced substantially in the tropics and sub-tropics of the world due to climate change. Bananas are quite sensitive to drought; however, genotypes with “B” genome are more tolerant to abiotic stresses than those solely based on “A” genome. In particular, bananas with “ABB” genomes are more tolerant to drought and other abiotic stresses than other genotypes. A good phenotyping plan is a prerequisite for any improvement program for targeted traits. In the present article, known drought tolerant traits of other crop plants are validated in bananas with different genomic backgrounds and presented. Since, banana is recalcitrant to breeding, strategies for making hybrids between different genomic backgrounds are also discussed. Stomatal conductance, cell membrane stability (CMS), leaf emergence rate, rate of leaf senescence, RWC, and bunch yield under soil moisture deficit stress are some of the traits associated with drought tolerance. Among these stress bunch yield under drought should be given top priority for phenotyping. In the light of recently released Musa genome draft sequence, the molecular breeders may have interest in developing molecular markers for drought resistance. PMID:23443573

Drought-tolerant QTL qVDT11 leads to stable tiller formation under drought stress conditions in rice.

PubMed

Kim, Tae-Heon; Hur, Yeon-Jae; Han, Sang-Ik; Cho, Jun-Hyun; Kim, Kyung-Min; Lee, Jong-Hee; Song, You-Chun; Kwon, Yeong-Up; Shin, Dongjin

2017-03-01

Drought is an important limiting factor for rice production, but the genetic mechanisms of drought tolerance is poorly understood. Here, we screened 218 rice varieties to identify 32 drought-tolerant varieties. The variety Samgang exhibited strong drought tolerance and stable yield in rain-fed conditions and was selected for further study. To identify QTLs for drought tolerance, we examined visual drought tolerance (VDT) and relative water content (RWC) phenotypes in a doubled haploid (DH) population of 101 individuals derived from a cross between Samgang and Nagdong (a drought-sensitive variety). Three QTLs from Samgang were identified for VDT and explained 41.8% of the phenotypic variance. In particular, qVDT11 contributed 20.3% of the phenotypic variance for RWC. To determine QTL effects on drought tolerance in rain-fed paddy conditions, seven DH lines were selected according to the number of QTLs they contained. Of the drought-tolerance-associated QTLs, qVDT2 and qVDT6 did not affect tiller formation, but qVDT11 increased tiller number. Tiller formation was most stable when qVDT2 and qVDT11 were combined. DH lines with both of these drought-tolerance-associated QTLs exhibited the most stable tiller formation. Together, these results suggest that qVDT11 is important for drought tolerance and stable tiller formation in rain-fed paddy fields. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Pathways Into and Out of the 2012-2016 California-Nevada Drought—Lessons for Future Drought and Drought Termination

NASA Astrophysics Data System (ADS)

Dettinger, M. D.

2017-12-01

Droughts in California have historically been a function of prolonged deficits of precipitation from the largest storms (much more so than from medium to weak storms), and drought endings typically reflect the return of those same large storms and more. The recent 2012-2016 drought in California followed this pattern, being bracketed by the extremely wet 2011 and 2017 water years, both brought about by the arrival of multiple major atmospheric river storms, and was marked by one of the episodic multi-year periods when these storms are diverted from the State by anomalous atmospheric circulations over the northeastern Pacific Ocean. The 2012-2016 episode was also marked by conditions that have been much less "normal" for California droughts, with record warm temperatures adding significantly to the drought and its impacts. Except in the highest mountains, these temperatures contributed as much to the drought potential as did precipitation deficits. The temperatures also led to record snow droughts that focused most in the low to middle altitude snowfields. Together the persistent precipitation deficits and high temperatures of this drought are a prescient example of a major drought with precipitation deficits emphasized at higher altitudes and temperature effects at lower altitudes. This drought ended with the remarkably wet 2017 water year, due to the arrival of a record number of large atmospheric river storms and associated precipitation. But this termination of precipitation drought was marked by its own flirtation with record-breaking "warm" snow drought conditions in late 2016 as well as by an eventual springtime snowpack that was very large but nowhere near as large as in other historical years with correspondingly large precipitation totals, especially at low to middle altitudes. These patterns of temperature-accentuated drought emphasized at lower altitudes and precipitation-driven droughts and drought endings emphasized at higher altitudes, both delineated

Examining the extreme 2017 spring drought event in South Korea using a suite of drought indices (SPI, SC-PDSI, SPEI, EDI)

NASA Astrophysics Data System (ADS)

Nam, W. H.; Hayes, M. J.; Svoboda, M. D.; Fuchs, B.; Tadesse, T.; Wilhite, D. A.; Hong, E. M.; Kim, T.

2017-12-01

South Korea has experienced extreme droughts in 1994-1995, 2000-2001, 2012, 2015, and 2016-2017. The 2017 spring drought (with especially low winter precipitation recorded in winter 2016) affected a large portion of central and western South Korea, and was one of the most severe droughts in the region since the 2000-2001 drought. The spring drought of 2017 was characterized by exceptionally low precipitation with total precipitation from January to June being 50% lower than the mean normal precipitation record (1981-2010) over most of western South Korea. It was the climatologically driest spring over the 1961-2016 record period. Effective drought monitoring and management depends on which drought indices are selected because each drought index has different drought criteria or levels of drought severity, associated with drought responses. In this study, for the quantitative analysis of the spring 2017 drought event in South Korea, four widely-used drought indices, including the Standardized Precipitation Index (SPI), the Standardized Precipitation Evapotranspiration Index (SPEI), the Self-Calibrated Palmer Drought Severity Index (SC-PDSI), and the Effective Drought Index (EDI) are compared with observed drought damaged areas in the context of agricultural drought impacts. The South Korean government (Ministry of Agriculture, Food and Rural Affairs (MAFRA) and Korea Rural Community Corporation (KRC)) has been operating a government-level drought monitoring system since 2016. Results from this study can be used to improve the drought monitoring applications, as well as drought planning and preparedness in South Korea.

Developing Drought Outlook Forums in Support of a Regional Drought Early Warning Information System

NASA Astrophysics Data System (ADS)

Mcnutt, C. A.; Pulwarty, R. S.; Darby, L. S.; Verdin, J. P.; Webb, R. S.

2011-12-01

The National Integrated Drought Information System (NIDIS) Act of 2006 (P.L. 109-430) charged NIDIS with developing the leadership and partnerships necessary to implement an integrated national drought monitoring and forecasting system that creates a drought "early warning system". The drought early warning information system should be capable of providing accurate, timely and integrated information on drought conditions at the relevant spatial scale to facilitate proactive decisions aimed at minimizing the economic, social and ecosystem losses associated with drought. As part of this effort, NIDIS has held Regional Drought Outlook Forums in several regions of the U.S. The purpose of the Forums is to inform practices that reduce vulnerability to drought through an interactive and collaborative process that includes the users of the information. The Forums have focused on providing detailed assessments of present conditions and impacts, comparisons with past drought events, and seasonal predictions including discussion of the state and expected evolution of the El Niño Southern Oscillation phenomena. Regional Climate Outlook Forums (RCOFs) that include close interaction between information providers and users are not a new concept, however. RCOFs started in Africa in the 1990s in response to the 1997-98 El Niño and have since expanded to South America, Asia, the Pacific islands, and the Caribbean. As a result of feedback from the RCOFs a large body of research has gone into improving seasonal forecasts and the capacity of the users to apply the information in a way that improves their decision-making. Over time, it has become clear that more is involved than just improving the interaction between the climate forecasters and decision-makers. NIDIS is using the RCOF approach as one component in a larger effort to develop Regional Drought Early Warning Information Systems (RDEWS) around the U.S. Using what has been learned over the past decade in the RCOF process

Assessing the utility of meteorological drought indices in monitoring summer drought based on soil moisture in Chongqing, China

NASA Astrophysics Data System (ADS)

Chen, Hui; Wu, Wei; Liu, Hong-Bin

2018-04-01

Numerous drought indices have been developed to analyze and monitor drought condition, but they are region specific and limited by various climatic conditions. In southwest China, summer drought mainly occurs from June to September, causing destructive and profound impact on agriculture, society, and ecosystems. The current study assesses the availability of meteorological drought indices in monitoring summer drought in this area at 5-day scale. The drought indices include the relative moisture index ( M), the standardized precipitation index (SPI), the standardized precipitation evapotranspiration index (SPEI), the composite index of meteorological drought (CIspi), and the improved composite index of meteorological drought (CIwap). Long-term daily precipitation and temperature from 1970 to 2014 are used to calculate 30-day M ( M 30), SPI (SPI30), SPEI (SPEI30), 90-day SPEI (SPEI90), CIspi, and CIwap. The 5-day soil moisture observations from 2010 to 2013 are applied to assess the performance of these drought indices. Correlation analysis, overall accuracy, and kappa coefficient are utilized to investigate the relationships between soil moisture and drought indices. Correlation analysis indicates that soil moisture is well correlated with CIwap, SPEI30, M 30, SPI30, and CIspi except SPEI90. Moreover, drought classifications identified by M 30 are in agreement with that of the observed soil moisture. The results show that M 30 based on precipitation and potential evapotranspiration is an appropriate indicator for monitoring drought condition at a finer scale in the study area. According to M 30, summer drought during 1970-2014 happened in each year and showed a slightly upward tendency in recent years.

Economics and societal considerations of drought

Treesearch

Jeff Prestemon; Linda Kruger; Karen L. Abt; Michael Bowker; Consuelo Brandeis; Dave Calkin; Geoffrey H. Donovan; Charlotte Ham; Thomas P. Holmes; Jeffrey Kline; Travis Warziniack

2016-01-01

The economic and social effects of drought are diverse and related to physical characteristics of drought, including spatial extent, severity, duration, and frequency that combine to determine drought’s overall effects on society. Most of the attention given to economic and social impacts of drought focuses on adverse consequences, but technology, public...

Fire and drought [Chapter 7

Treesearch

Jeremy S. Littell; David L. Peterson; Karin L. Riley; Yongqiang Liu; Charles H. Luce

2016-01-01

Historical and presettlement relationships between drought and wildfire have been well documented in much of North America, with forest fire occurrence and area burned clearly increasing in response to drought. Drought interacts with other controls (forest productivity, topography, and fire weather) to affect fire intensity and severity. Fire regime characteristics (...

Disentangling the role of Natural Variability and Climate Change in the aggravation of Droughts in central Chile

NASA Astrophysics Data System (ADS)

Garreaud, R. D.; Boisier, J. P.; Rondanelli, R. F.

2016-12-01

Among other climate extreme events, droughts (annual rainfall deficit larger than 25%) have punctuated the hydro-climate history of central Chile (30-40°S) with profoundly negative effects on physical (e.g., water storage depletion), ecological (e.g., increase in forest fires) and human systems (e.g., major distress in rural communities). In this presentation we show that intense but short-lived (1 or 2 years long) droughts are associated with anticyclonic (cyclonic) anomalies over the subtropical south Pacific (Amudsen sea), reduced synoptic-scale variability in that area and weakening of the westerly winds impinging the west coast of South America. These large-scale anomalies often occurs in connection with the cold phase of ENSO (La Niña events). Of particular interest is an uninterrupted rainfall deficit since 2010 to date, referred to as the central Chile mega-drought (MD) in virtue of its unprecedented character in term of duration, spatial extent and coincidence with warm air temperatures. The protracted MD shares some of the climate features of the historical events but for the prevalence of near-neutral ENSO years with the exception of 2010 (La Niña) and 2015 (intense El Niño). Thus, we use a suite of fully-coupled and SST-forced climate simulations to disentangle natural and anthropogenic contributions to current mega drought as well as to shed light in the physical link between global climate change and rainfall deficit in central Chile drought. It turns out that anthropogenic climate change accounts for about a third of the drought as it forces SAM towards its positive polarity. The later enhances a dipole of geopotential height over the South Pacific that is conducive to dry conditions in central Chile.

Proteomic analysis of B-aminobutyric acid priming and aba-induction of drought resistance in crabapple (Malus pumila): effect on general metabolism, the phenylpropanoid pathway and cell wall enzymes

USDA-ARS?s Scientific Manuscript database

In a variety of annual crops and model plants, the xenobiotic compound, DL-beta-aminobutyric acid (BABA), has been shown to enhance disease resistance and increase salt, drought, and thermotolerance. BABA does not activate stress genes directly but rather sensitizes plants to respond more quickly a...

Droughts and water scarcity: facing challenges

NASA Astrophysics Data System (ADS)

Pereira, Luis S.

2014-05-01

Water scarcity characterizes large portions of the world, particularly the Mediterranean area. It is due to natural causes - climate aridity, which is permanent, and droughts, that are temporary - and to human causes - long term desertification and short term water shortages. Droughts aggravate water scarcity. Knowledge has well developed relative to all processes but management tools still are insufficient as well as the tools required to support appropriate planning and management. Particularly, new approaches on tools for assessing related impacts in agriculture and other economic and social activities are required. Droughts occur in all climates but their characteristics largely differ among regions both in terms frequency, duration and intensity. Research has already produced a large number of tools that allow appropriate monitoring of droughts occurrence and intensity, including dynamics of drought occurrence and time evolution. Advances in drought prediction already are available but we still are far from knowing when a drought will start, how it will evolve and when it dissipates. New developments using teleconnections and GCM are being considered. Climate change is a fact. Are droughts occurrence and severity changing with global change? Opinions are divided about this subject since driving factors and processes are varied and tools for the corresponding analysis are also various. Particularly, weather data series are often too short for obtaining appropriate answers. In a domain where research is producing improved knowledge and innovative approaches, research faces however a variety of challenges. The main ones, dealt in this keynote, refer to concepts and definitions, use of monitoring indices, prediction of drought initiation and evolution, improved assessment of drought impacts, and possible influence of climate change on drought occurrence and severity.

Drought, Mortality and Social Structure.

ERIC Educational Resources Information Center

Sharma, Sanjay

1995-01-01

Examines the relationship between the human population explosion, resource depletion, drought, malnutrition, and disease. As a sample study, mortality trends in Rajasthan State in India in the 1980s were analyzed to correlate the increased death rate with the drought of 1987. It is demonstrated that drought-induced malnutrition was the root cause…

Assessment of Drought Severity Techniques - A Historical Perspective

NASA Astrophysics Data System (ADS)

Panu, U. S.; Crinklaw, T.

2011-12-01

Droughts are natural phenomenon experienced by all nations across the globe. Drought inherently means a scarcity of water, which adversely affects various sectors of human socio-economic spectrum, e.g. agriculture, hydropower generation, water supply, industry, recreation, navigation, fish production etc. The prime cause of droughts is the occurrence of less than optimal (below normal) precipitation, which has its origin to various natural reasons, the most important being the global climatic forcing. Droughts are also referred to as sustained and regionally extensive occurrences of below average water availability which invariably cultivate into environmental disasters. The evolution of a drought event is defined into four types; meteorological, agricultural, hydrological, and socio-economic. Drought affects all aspects of societal systems irrespective of how it is defined. This has led to a wide range of studies conducted by meteorologists, ecologists, environmentalists, hydrologists, geologists and agricultural scientists in attempts to understand drought processes as required to analyze and predict the impacts of droughts. A conceptual definition, such as a shortage of water relied on by human activity, avoids quantification of a drought event. On the other hand, the purpose of an operational definition is to determine the beginning, termination, and severity of a drought event. The severity assessment of droughts is of primary importance for allocation and management of available water resources. The progression and impact of historical droughts in a region is helpful for developing relationships and techniques to investigate relevant characteristics of droughts. For optimum drought preparedness and mitigative responses, professional bodies need to provide information to private and government agencies in a manner that may also be understood by their employers, stakeholders and the general public. Drought indicators bridge this communication gap between all

a Process-Based Drought Early Warning Indicator for Supporting State Drought Mitigation Decision

NASA Astrophysics Data System (ADS)

Fu, R.; Fernando, D. N.; Pu, B.

2014-12-01

Drought prone states such as Texas requires creditable and actionable drought early warning ranging from seasonal to multi-decadal scales. Such information cannot be simply extracted from the available climate prediction and projections because of their large uncertainties at regional scales and unclear connections to the needs of the decision makers. In particular, current dynamic seasonal predictions and climate projections, such as those produced by the NOAA national multi-models ensemble experiment (NMME) and the IPCC AR5 (CMIP5) models, are much more reliable for winter and spring than for the summer season for the US Southern Plains. They also show little connection between the droughts in winter/spring and those in summer, in contrast to the observed dry memory from spring to summer over that region. To mitigate the weakness of dynamic prediction/projections, we have identified three key processes behind the spring-to-summer dry memory through observational studies. Based on these key processes and related fields, we have developed a multivariate principle component statistical model to provide a probabilistic summer drought early warning indicator, using the observed or predicted climate conditions in winter and spring on seasonal scale and climate projection for the mid-21stcentury. The summer drought early warning indicator is constructed in a similar way to the NOAA probabilistic predictions that are familiar to water resource managers. The indicator skill is assessed using the standard NOAA climate prediction assessment tools, i.e., the two alternative forced choice (2AFC) and the Receiver Operating Characteristic (ROC). Comparison with long-term observations suggest that this summer drought early warning indicator is able to capture nearly all the strong summer droughts and outperform the dynamic prediction in this regard over the US Southern Plains. This early warning indicator has been used by the state water agency in May 2014 in briefing the state

Drought tolerance in potato (S. tuberosum L.): Can we learn from drought tolerance research in cereals?

PubMed

Monneveux, Philippe; Ramírez, David A; Pino, María-Teresa

2013-05-01

Drought tolerance is a complex trait of increasing importance in potato. Our knowledge is summarized concerning drought tolerance and water use efficiency in this crop. We describe the effects of water restriction on physiological characteristics, examine the main traits involved, report the attempts to improve drought tolerance through in vitro screening and marker assisted selection, list the main genes involved and analyze the potential interest of native and wild potatoes to improve drought tolerance. Drought tolerance has received more attention in cereals than in potato. The review compares these crops for indirect selection methods available for assessment of drought tolerance related traits, use of genetic resources, progress in genomics, application of water saving techniques and availability of models to anticipate the effects of climate change on yield. It is concluded that drought tolerance improvement in potato could greatly benefit from the transfer of research achievements in cereals. Several promising research directions are presented, such as the use of fluorescence, reflectance, color and thermal imaging and stable isotope techniques to assess drought tolerance related traits, the application of the partial root-zone drying technique to improve efficiency of water supply and the exploitation of stressful memory to enhance hardiness. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

Decadal climate variability and the spatial organization of deep hydrological drought

NASA Astrophysics Data System (ADS)

Barros, Ana P.; Hodes, Jared L.; Arulraj, Malarvizhi

2017-10-01

Empirical Orthogonal Function (EOF), wavelet, and wavelet coherence analysis of baseflow time-series from 126 streamgauges (record-length > 50 years; small and mid-size watersheds) in the US South Atlantic (USSA) region reveal three principal modes of space-time variability: (1) a region-wide dominant mode tied to annual precipitation that exhibits non-stationary decadal variability after the mid 1990s concurrent with the warming of the AMO (Atlantic Multidecadal Oscillation); (2) two spatial modes, east and west of the Blue Ridge, exhibiting nonstationary seasonal to sub-decadal variability before and after 1990 attributed to complex nonlinear interactions between ENSO and AMO impacting precipitation and recharge; and (3) deep (decadal) and shallow (< 6 years) space-time modes of groundwater variability separating basins with high and low annual mean baseflow fraction (MBF) by physiographic region. The results explain the propagation of multiscale climate variability into the regional groundwater system through recharge modulated by topography, geomorphology, and geology to determine the spatial organization of baseflow variability at decadal (and longer) time-scales, that is, deep hydrologic drought. Further, these findings suggest potential for long-range predictability of hydrological drought in small and mid-size watersheds, where baseflow is a robust indicator of nonstationary yield capacity of the underlying groundwater basins. Predictive associations between climate mode indices and deep baseflow (e.g. persistent decreases of the decadal-scale components of baseflow during the cold phase of the AMO in the USSA) can be instrumental toward improving forecast lead-times and long-range mitigation of severe drought.

Nature and causes of protracted droughts in southeast Australia: Comparison between the Federation, WWII, and Big Dry droughts

NASA Astrophysics Data System (ADS)

Verdon-Kidd, Danielle C.; Kiem, Anthony S.

2009-11-01

Three protracted droughts have occurred during the instrumental history of Southeast Australia (SEA) - the “Federation” (˜1895-1902), “World War II” (˜1937-1945) and the “Big Dry” (˜1997-present). This paper compares the nature and causes of these droughts in order to better inform drought management strategies in SEA. It is shown that the three droughts differ in terms of severity, spatial footprint, seasonality and seasonal rainfall make-up. This diversity arises due to the fact that the droughts are driven by different climatic teleconnections with the Pacific, Indian and Southern Oceans. Importantly, this study highlights potential flaws with drought forecasting and management in SEA and emphasises the need for further research into understanding and representing hydroclimatic drivers of drought.

Global patterns of drought recovery

Treesearch

Christopher R. Schwalm; William R. L. Anderegg; Anna M. Michalak; Joshua B. Fisher; Franco Biondi; George Koch; Marcy Litvak; Kiona Ogle; John D. Shaw; Adam Wolf; Deborah N. Huntzinger; Kevin Schaefer; Robert Cook; Yaxing Wei; Yuanyuan Fang; Daniel Hayes; Maoyi Huang; Atul Jain; Hanqin Tian

2017-01-01

Drought, a recurring phenomenon with major impacts on both human and natural systems is the most widespread climatic extreme that negatively affects the land carbon sink. Although twentieth-century trends in drought regimes are ambiguous, across many regions more frequent and severe droughts are expected in the twenty-first century. Recovery time - how long an...

Hydrologic Drought in the Colorado River Basin

NASA Astrophysics Data System (ADS)

Timilsena, J.; Piechota, T.; Hidalgo, H.; Tootle, G.

2004-12-01

This paper focuses on drought scenarios of the Upper Colorado River Basin (UCRB) for the last five hundred years and evaluates the magnitude, severity and frequency of the current five-year drought. Hydrologic drought characteristics have been developed using the historical streamflow data and tree ring chronologies in the UCRB. Historical data include the Colorado River at Cisco and Lees Ferry, Green River, Palmer Hydrologic Drought Index (PHDI), and the Z index. Three ring chronologies were used from 17 spatially representative sites in the UCRB from NOAA's International Tree Ring Data. A PCA based regression model procedures was used to reconstruct drought indices and streamflow in the UCRB. Hydrologic drought is characterized by its duration (duration in year in which cumulative deficit is continuously below thresholds), deficit magnitude (the cumulative deficit below the thresholds for consecutive years), severity (magnitude divided by the duration) and frequency. Results indicate that the current drought ranks anywhere from the 5th to 20th worst drought during the period 1493-2004, depending on the drought indicator and magnitude. From a short term perspective (using annual data), the current drought is more severe than if longer term average (i.e., 5 or 10 year averages) are used to define the drought.

Drought Tolerance in Modern and Wild Wheat

PubMed Central

Budak, Hikmet; Kantar, Melda; Yucebilgili Kurtoglu, Kuaybe

2013-01-01

The genus Triticum includes bread (Triticum aestivum) and durum wheat (Triticum durum) and constitutes a major source for human food consumption. Drought is currently the leading threat on world's food supply, limiting crop yield, and is complicated since drought tolerance is a quantitative trait with a complex phenotype affected by the plant's developmental stage. Drought tolerance is crucial to stabilize and increase food production since domestication has limited the genetic diversity of crops including wild wheat, leading to cultivated species, adapted to artificial environments, and lost tolerance to drought stress. Improvement for drought tolerance can be achieved by the introduction of drought-grelated genes and QTLs to modern wheat cultivars. Therefore, identification of candidate molecules or loci involved in drought tolerance is necessary, which is undertaken by “omics” studies and QTL mapping. In this sense, wild counterparts of modern varieties, specifically wild emmer wheat (T. dicoccoides), which are highly tolerant to drought, hold a great potential. Prior to their introgression to modern wheat cultivars, drought related candidate genes are first characterized at the molecular level, and their function is confirmed via transgenic studies. After integration of the tolerance loci, specific environment targeted field trials are performed coupled with extensive analysis of morphological and physiological characteristics of developed cultivars, to assess their performance under drought conditions and their possible contributions to yield in certain regions. This paper focuses on recent advances on drought related gene/QTL identification, studies on drought related molecular pathways, and current efforts on improvement of wheat cultivars for drought tolerance. PMID:23766697

A novel salt-inducible gene SbSI-1 from Salicornia brachiata confers salt and desiccation tolerance in E. coli.

PubMed

Yadav, Narendra Singh; Rashmi, Deo; Singh, Dinkar; Agarwal, Pradeep K; Jha, Bhavanath

2012-02-01

Salicornia brachiata is one of the extreme salt tolerant plants and grows luxuriantly in coastal areas. Previously we have reported isolation and characterization of ESTs from S. brachiata with large number of unknown gene sequences. Reverse Northern analysis showed upregulation and downregulation of few unknown genes in response to salinity. Some of these unknown genes were made full length and their functional analysis is being tested. In this study, we have selected a novel unknown salt inducible gene SbSI-1 (Salicornia brachiata salt inducible-1) for the functional validation. The SbSI-1 (Gen-Bank accession number JF 965339) was made full length and characterized in detail for its functional validation under desiccation and salinity. The SbSI-1 gene is 917 bp long, and contained 437 bp 3' UTR, and 480 bp ORF region encoding 159 amino acids protein with estimated molecular mass of 18.39 kDa and pI 8.58. The real time PCR analysis revealed high transcript expression in salt, desiccation, cold and heat stresses. However, the maximum expression was obtained by desiccation. The ORF region of SbSI-1 was cloned in pET28a vector and transformed in BL21 (DE3) E. coli cells. The SbSI-1 recombinant E. coli cells showed tolerance to desiccation and salinity stress compared to only vector in the presence of stress.

Building the vegetation drought response index for Canada (VegDRI-Canada) to monitor agricultural drought: first results

USGS Publications Warehouse

Tadesse, Tsegaye; Champagne, Catherine; Wardlow, Brian D.; Hadwen, Trevor A.; Brown, Jesslyn; Demisse, Getachew B.; Bayissa, Yared A.; Davidson, Andrew M.

2017-01-01