INNOVATIVE TECHNOLOGY EVALUATION REPORT ...

EPA Pesticide Factsheets

The Split Core Sampler for Submerged Sediments (Split Core Sampler) designed and fabricated by Arts Manufacturing & Supply, Inc., was demonstrated under the U.S. Environmental Protection Agency (EPA) Superfund Innovative Technology Evaluation Program in April and May 1999 at sites in EPA Regions 1 and 5, respectively. In addition to assessing ease of sampler operation, key objectives of the demonstration included evaluating the samplers ability to (1) consistently collect a given volume of sediment, (2) consistently collect sediment in a given depth interval, (3) collect samples with consistent characteristics from a homogenous layer of sediment, and (4) collect samples under a variety of site conditions. This report describes the demonstration results for the Split Core Sampler and two conventional samplers (the Hand Corer and Vibrocorer) used as reference samplers. During the demonstration, the Split Core Sampler performed as well as or better than the reference samplers. Based on visual observations, both the Split Core Sampler and reference samplers collected partially compressed samples of consolidated and unconsolidated sediments from the sediment surface downward; sample representativeness may be questionable because of core shortening and core compression. Sediment stratification was preserved for both consolidated and unconsolidated sediment samples collected by the Split Core Sampler and reference samplers. No sampler was able to collect samples

Molecular Detection of Avian Influenza Virus from Sediment Samples in Waterfowl Habitats on the Delmarva Peninsula, United States.

PubMed

Densmore, C L; Iwanowicz, D D; Ottinger, C A; Hindman, L J; Bessler, A M; Iwanowicz, L R; Prosser, D J; Whitbeck, M; Driscoll, C P

2017-12-01

Avian influenza viruses (AIV) affect many species of birds including waterfowl and may persist in sediment in aquatic habitats. Sediment samples were collected from two areas representative of prime migration and overwintering waterfowl habitat in Dorchester County, Maryland in the fall and winter of 2013-2014. Samples were screened for the presence of AIV via reverse transcriptase-quantitative PCR targeting the matrix gene. Although 13.6% of sediment samples were positive for the AIV matrix gene across all collection dates and locations, differences in detection were noted with location and collection season. Percentage of AIV-positive sediment samples recovered corresponded to trends in waterfowl abundance at collection sites both temporally and spatially. These findings provide further support for the assertion that the presence of AIV in the aquatic environment is likely affected by the total number, site-specific density, and array of waterfowl species.

Data compilation for assessing sediment and toxic chemical loads from the Green River to the lower Duwamish Waterway, Washington

USGS Publications Warehouse

Conn, Kathleen E.; Black, Robert W.

2014-01-01

Between February and June 2013, the U.S. Geological Survey collected representative samples of whole water, suspended sediment, and (or) bed sediment from a single strategically located site on the Duwamish River, Washington, during seven periods of different flow conditions. Samples were analyzed by Washington-State-accredited laboratories for a large suite of compounds, including polycyclic aromatic hydrocarbons and other semivolatile compounds, polychlorinated biphenyl Aroclors and the 209 congeners, metals, dioxins/furans, volatile organic compounds, pesticides, butyltins, hexavalent chromium, and total organic carbon. Chemical concentrations associated with bulk bed sediment (<2 mm) and fine bed sediment (<62.5 μm) fractions were compared to chemical concentrations associated with suspended sediment. Bulk bed sediment concentrations generally were lower than fine bed sediment and suspended-sediment concentrations. Concurrent with the chemistry sampling, additional parameters were measured, including instantaneous river discharge, suspended-sediment concentration, sediment particle-size distribution, and general water-quality parameters. From these data, estimates of instantaneous sediment and chemical loads from the Green River to the Lower Duwamish Waterway were calculated.

Characteristic sediment and water column chlorophyll-a in the sea cucumber’s Paracaudina sp. habitat on the Kenjeran Water, Surabaya

NASA Astrophysics Data System (ADS)

Widianingsih, W.; Zaenuri, M.; Anggoro, S.; Kusumaningrum, H. P.; Hartati, R.

2018-03-01

The study of characteristic sediment and water column chlorophyll-a has an important role in the sea cucumber habitat. Sediment chlorophyll-a represents a productivity primer for the benthic community. This research has a purpose to investigate characteristic sediment and water column chlorophyll-a on the Kenjeran water, Surabaya. Sediment samples were collected by the ekman grab for analysis, grain size and nutrient. The sample for sediment chlorophyll-a was taken by core sampler. The water samples were taken with Nansen Bottles. According to the research result, the values of sediment chlorophyll-a at station 10, 11 and 12 were higher than the other stations. In contrast, the value of chlorophyll-a in the column water had almost the same value for each station. The sediment chlorophyll-a value on clay and silt sediment type was higher than the fine sand and coarse sediment type. The suitable habitat characteristic for Paracaudina sp. was clay and silt sediment with sediment chlorophyll concentration ranging from 347.82 mg·m-2 to 1135.52 mg·m-2.

137Cs as a tracer of recent sedimentary processes in Lake Michigan

USGS Publications Warehouse

Cahill, R.A.; Steele, J.D.

1986-01-01

To determine recent sediment movement, we measured the levels of 137Cs (an artificial radionuclide produced during nuclear weapons testing) of 118 southern Lake Michigan samples and 27 in Green Bay. These samples, taken from 286 grab samples of the upper 3 cm of sediment, were collected in 1975 as part of a systematic study of Lake Michigan sediment. 137Cs levels correlated well with concentrations of organic carbon, lead, and other anthropogenic trace metals in the sediment. 137Cs had a higher correlation with silt-sized than with clay-sized sediment (0.55 and 0.46, respectively). Atmospherically derived 137Cs and trace metals are being redistributed by sedimentary processes in Lake Michigan after being incorporated in suspended sediment. We determined a distribution pattern of 137Cs that represents areas of southern Lake Michigan where sediment deposition is occurring. ?? 1986 Dr W. Junk Publishers.

Hydrogeochemical and stream sediment special reconnaissance report for the Deep Creek Mountains, Nevada and Utah

DOE Office of Scientific and Technical Information (OSTI.GOV)

Qualheim, B.

1979-04-01

This report represents the results of the reconnaissance sampling of the Deep Creek Mountains of western Utah. The Deep Creek range is located in the northwest corner of the Delta NTMS 1:250,000 and the southwestern corner of the Tooele NTMS 1:250,000 sheets and covers an area of 1750 km/sup 2/. Samples collected in this study include dry and wet stream sediments and water from available streams, wells, and springs. The samples were analyzed for uranium, as well as 15 to 20 trace elements, using neutron activation techniques. In addition, field and laboratory measurements were made on the water samples. Analyticalmore » data and field measurements are presented in tabular hard copy and fiche format. Water-sample site locations, water-sample uranium concentrations, sediment-sample site locations, and sediment-sample uranium concentrations are shown on separate overlays.« less

Sediment acoustic index method for computing continuous suspended-sediment concentrations

USGS Publications Warehouse

Landers, Mark N.; Straub, Timothy D.; Wood, Molly S.; Domanski, Marian M.

2016-07-11

Once developed, sediment acoustic index ratings must be validated with additional suspended-sediment samples, beyond the period of record used in the rating development, to verify that the regression model continues to adequately represent sediment conditions within the stream. Changes in ADVM configuration or installation, or replacement with another ADVM, may require development of a new rating. The best practices described in this report can be used to develop continuous estimates of suspended-sediment concentration and load using sediment acoustic surrogates to enable more informed and accurate responses to diverse sedimentation issues.

Comparison of flume and towing methods for verifying the calibration of a suspended-sediment sampler

USGS Publications Warehouse

Beverage, J.P.; Futrell, J.C.

1986-01-01

Suspended-sediment samplers must sample isokinetically (at stream velocity) in order to collect representative water samples of rivers. Each sampler solo by the Federal Interagency Sedimentation Project or by the U.S. Geological Survey Hydrologic Instrumentation Facility has been adjusted to sample isokinetically and tested in a flume to verify the calibration. The test program for a modified U.S. P-61 sampler provided an opportunity to compare flume and towing tank tests. Although the two tests yielded statistically distinct results, the difference between them was quite small. The conclusion is that verifying the calibration of any suspended-sediment sampler by either the flume or towing method should give acceptable results.

Exploring Genomic Diversity Using Metagenomics of Deep-Sea Subsurface Microbes from the Louisville Seamount and the South Pacific Gyre

NASA Astrophysics Data System (ADS)

Tully, B. J.; Sylvan, J. B.; Heidelberg, J. F.; Huber, J. A.

2014-12-01

There are many limitations involved with sampling microbial diversity from deep-sea subsurface environments, ranging from physical sample collection, low microbial biomass, culturing at in situ conditions, and inefficient nucleic acid extractions. As such, we are continually modifying our methods to obtain better results and expanding what we know about microbes in these environments. Here we present analysis of metagenomes sequences from samples collected from 120 m within the Louisville Seamount and from the top 5-10cm of the sediment in the center of the south Pacific gyre (SPG). Both systems are low biomass with ~102 and ~104 cells per cm3 for Louisville Seamount samples analyzed and the SPG sediment, respectively. The Louisville Seamount represents the first in situ subseafloor basalt and the SPG sediments represent the first in situ low biomass sediment microbial metagenomes. Both of these environments, subseafloor basalt and sediments underlying oligotrophic ocean gyres, represent large provinces of the seafloor environment that remain understudied. Despite the low biomass and DNA generated from these samples, we have generated 16 near complete genomes (5 from Louisville and 11 from the SPG) from the two metagenomic datasets. These genomes are estimated to be between 51-100% complete and span a range of phylogenetic groups, including the Proteobacteria, Actinobacteria, Firmicutes, Chloroflexi, and unclassified bacterial groups. With these genomes, we have assessed potential functional capabilities of these organisms and performed a comparative analysis between the environmental genomes and previously sequenced relatives to determine possible adaptations that may elucidate survival mechanisms for these low energy environments. These methods illustrate a baseline analysis that can be applied to future metagenomic deep-sea subsurface datasets and will help to further our understanding of microbiology within these environments.

Assessment of Density Variations of Marine Sediments with Ocean and Sediment Depths

PubMed Central

Tenzer, R.; Gladkikh, V.

2014-01-01

We analyze the density distribution of marine sediments using density samples taken from 716 drill sites of the Deep Sea Drilling Project (DSDP). The samples taken within the upper stratigraphic layer exhibit a prevailing trend of the decreasing density with the increasing ocean depth (at a rate of −0.05 g/cm3 per 1 km). Our results confirm findings of published studies that the density nonlinearly increases with the increasing sediment depth due to compaction. We further establish a 3D density model of marine sediments and propose theoretical models of the ocean-sediment and sediment-bedrock density contrasts. The sediment density-depth equation approximates density samples with an average uncertainty of about 10% and better represents the density distribution especially at deeper sections of basin sediments than a uniform density model. The analysis of DSDP density data also reveals that the average density of marine sediments is 1.70 g/cm3 and the average density of the ocean bedrock is 2.9 g/cm3. PMID:24744686

Evaluation of dredged material proposed for ocean disposal from Gravesend Bay Anchorage, New York

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barrows, E.S.; Gruendell, B.D.

1996-09-01

The Gravesend Bay Anchorage was one of seven waterways that the US Army Corps of Engineers-New York District (USACE-NYD) requested the Battelle Marine Sciences Laboratory (MSL) to sample and evaluate for dredging and disposal in February 1994. Sediment samples were submitted for physical and chemical analyses to provide baseline sediment chemistry data on the Gravesend Bay Anchorage. Individual sediment core samples collected at the Gravesend Bay Anchorage were analyzed for grain size, moisture content, and total organic carbon (TOC). Two samples, one of composited sediment cores representing the southeast corner of the anchorage (COMP GR), and one sediment core representingmore » the northeast corner of the anchorage (Station GR-1 0), were analyzed for bulk density, specific gravity, metals, chlorinated pesticides, polychlorinated biphenyl (PCB) congeners, polynuclear aromatic hydrocarbons (PAH), and 1,4-dichlorobenzene.« less

Characterizing spatial structure of sediment E. coli populations to inform sampling design.

PubMed

Piorkowski, Gregory S; Jamieson, Rob C; Hansen, Lisbeth Truelstrup; Bezanson, Greg S; Yost, Chris K

2014-01-01

Escherichia coli can persist in streambed sediments and influence water quality monitoring programs through their resuspension into overlying waters. This study examined the spatial patterns in E. coli concentration and population structure within streambed morphological features during baseflow and following stormflow to inform sampling strategies for representative characterization of E. coli populations within a stream reach. E. coli concentrations in bed sediments were significantly different (p = 0.002) among monitoring sites during baseflow, and significant interactive effects (p = 0.002) occurred among monitoring sites and morphological features following stormflow. Least absolute shrinkage and selection operator (LASSO) regression revealed that water velocity and effective particle size (D 10) explained E. coli concentration during baseflow, whereas sediment organic carbon, water velocity and median particle diameter (D 50) were important explanatory variables following stormflow. Principle Coordinate Analysis illustrated the site-scale differences in sediment E. coli populations between disconnected stream segments. Also, E. coli populations were similar among depositional features within a reach, but differed in relation to high velocity features (e.g., riffles). Canonical correspondence analysis resolved that E. coli population structure was primarily explained by spatial (26.9–31.7 %) over environmental variables (9.2–13.1 %). Spatial autocorrelation existed among monitoring sites and morphological features for both sampling events, and gradients in mean particle diameter and water velocity influenced E. coli population structure for the baseflow and stormflow sampling events, respectively. Representative characterization of streambed E. coli requires sampling of depositional and high velocity environments to accommodate strain selectivity among these features owing to sediment and water velocity heterogeneity.

Water-quality assessment of the Rio Grande Valley, Colorado, New Mexico and Texas; organic compounds and trace elements in bed sediment and fish tissue, 1992-93

USGS Publications Warehouse

Carter, L.F.; Anderholm, S.K.

1997-01-01

The occurrence and distribution of contaminants in aquatic systems are major components of the National Water-Quality Assessment (NAWQA) Program. Bed-sediment samples were collected at 18 sites in the Rio Grande Valley study unit between September 1992 and March 1993 to characterize the geographic distribution of organic compounds, including chlorinated insecticides, polychlorinated biphenyls (PCB's), and other chlorinated hydrocarbons, and also trace elements. Two-millimeter-size- fraction sediment was analyzed for organic compounds and less than 63-micron-size-fraction sediment was analyzed for trace elements. Concentrations of p,p'-DDE were detected in 33 percent of the bed-sediment samples. With the exception of DDT-related compounds, no other organochlorine insecticides or polychlorinated biphenyls were detected in samples of bed sediment. Whole-body fish samples were collected at 11 of the bed- sediment sites and analyzed for organic compounds. Organic compounds were reported more frequently in samples of fish, and more types of organic compounds were found in whole-body fish samples than in bed-sediment samples. Concentrations of p,p'-DDE were detected in 91 percent of whole-body fish samples. Polychlorinated biphenyls, cis-chlordane, trans-chlordane, trans- nonachlor, and hexachlorobenzene were other organic compounds detected in whole-body samples of fish from at least one site. Because of the extent of mineralized areas in the Rio Grande Basin arsenic, cadmium, copper, lead, mercury, selenium, and zinc concentrations in bed-sediment samples could represent natural conditions at most sites. However, a combination of natural conditions and human activities appears to be associated with elevated trace-element concentrations in the bed-sediment sample from the site Rio Grande near Creede, Colorado, because this sample exceeded the background trace-element concentrations calculated for this study. Fish-liver samples were collected at 12 of the bed-sediment sites and analyzed for trace elements. Certain trace elements were detected at higher concentrations in fish-liver samples than in bed-sediment samples from the same site. Both bed-sediment and fish-tissue samples are necessary for a complete environmental assessment of the occurrence and distribution of trace elements.

Sediment matrix characterization as a tool for evaluating the environmental impact of heavy metals in metal mining, smelting, and ore processing areas.

PubMed

Ružičková, Silvia; Remeteiová, Dagmar; Mičková, Vladislava; Dirner, Vojtech

2018-02-21

In this work, the matrix characterization (mineralogy, total and local chemical composition, and total organic (TOC) and inorganic carbon (TIC) contents) of different types of sediments from mining- and metallurgy-influenced areas and the assessment of the impact of the matrix on the association of potentially hazardous metals with the mineral phases of these samples, which affect their mobility in the environment, are presented. For these purposes, sediment samples with different origins and from different locations in the environment were analyzed. Anthropogenic sediments from metal-rich post-flotation tailings (Lintich, Slovakia) represent waste from ore processing, natural river sediments from the Hornád River (Košice, Slovakia) represent areas influenced predominantly by the metallurgical industry, and lake sediments from a water reservoir Ružín (inflow from the Hornád and Hnilec Rivers, Slovakia) represent the impact of the metallurgical and/or mining industries. The total metal contents were determined by X-ray fluorescence (XRF) analysis, the local chemical and morphological microanalysis by scanning electron microscopy with energy-dispersive spectroscopy (SEM-EDS), and the TOC and TIC contents by infrared (IR) spectrometry. The mobility/bioavailability of Cu, Pb, and Zn in/from sediments at the studied areas was assessed by ethylenediaminetetraacetic acid (EDTA) and acetic acid (AA) extraction and is discussed in the context of the matrix composition. The contents of selected potentially hazardous elements in the extracts were determined by the high-resolution continuum source flame atomic absorption spectrometry (HR-CS FAAS).

Minor soil erosion contribution to denudation in Central Nepal Himalaya.

NASA Astrophysics Data System (ADS)

Morin, Guillaume; France-Lanord, Christian; Gallo, Florian; Lupker, Maarten; Lavé, Jérôme; Gajurel, Ananta

2013-04-01

In order to decipher river sediments provenance in terms of erosion processes, we characterized geochemical compositions of hillslope material coming from soils, glaciers and landslide, and compared them to rivers sediments. We focused our study on two South flank Himalayan catchments: (1) Khudi khola, as an example of small High Himalayan catchment (150 km2), undergoing severe precipitation, and rapid erosion ≈ 3.5 mm/yr [A] and (2) the Narayani-Gandak Transhimalayan basin (52000 km2) that drains the whole central Nepal. To assess the question, systematic samplings were conducted on hillslope material from different erosion processes in the basins. River sediment include daily sampling during the 2010 monsoon at two stations, and banks samples in different parts of the basins. Source rocks, soil and landslide samples, are compared to river sediment mobile to immobile element ratios, completed by hydration degree H2O+ analysis[2]. Data show that soils are clearly depleted in mobile elements Na, K, Ca, and highly hydrated compared to source rocks and other erosion products. In the Khudi basin, the contrast between soil and river sediment signatures allow to estimate that soil erosion represents less than 5% of the total sediment exported by the river. Most of the river sediment therefore derives from landslides inputs and to a lesser extent by barren high elevation sub-basins. This is further consistent with direct observation that, during monsoon, significant tributaries of the Khudi river do not export sediments. Considering that active landslide zones represent less than 0.5% of the total watershed area, it implies that erosion distribution is highly heterogeneous. Landslide erosion rate could reach more than 50 cm/yr in the landslide area. Sediments of the Narayani river are not significantly different from those of the Khudi in spite of more diverse geomorphology and larger area of the basin. Only H2O+ and Total Organic Carbon concentrations normalised to Al/Si ratios show distinctly higher values. This suggests that contribution of soil erosion is higher than in the Khudi basin. Nevertheless, soil erosion remains a minor source of sediments implying that more physical processes such as landslide and glaciers dominate the erosional flux. In spite of high deforestation and agricultural land-use [B], soil erosion does not represent an important source of sediments in Nepal Himalaya. [A] Gabet et al. (2008) Earth and Planetary Science Letters 267, 482-494. [B] Gardner et al. (2003) Applied Geography 23, 23-45.

Evaluation of dredged material proposed for ocean disposal from Hudson River, New York

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gardiner, W.W.; Barrows, E.S.; Antrim, L.D.

1996-09-01

The Hudson River (Federal Project No. 41) was one of seven waterways that the U.S. Army Corps of Engineers-New York District (USACE-NYD) requested the Battelle Marine Sciences Laboratory (MSL) to sample and evaluate for dredging and disposal in March 1994. Sediment samples were collected from the Hudson River. Tests and analyses were conducted on Hudson River sediment core samples. The evaluation of proposed dredged material from the Hudson River included bulk sediment chemical analyses, chemical analyses of site water and elutriate, water-column and benthic acute toxicity tests, and bioaccumulation studies. Individual sediment core samples collected from Hudson River were analyzedmore » for grain size, moisture content, and total organic carbon (TOC). A composite sediment sample, representing the entire area proposed for dredging, was analyzed for bulk density, specific gravity, metals, chlorinated pesticides, polychlorinated biphenyl (PCB) congeners, polynuclear aromatic hydrocarbons (PAH), and 1,4-dichlorobenzene. Site water and elutriate water, prepared from the suspended-particulate phase (SPP) of Hudson River sediment, were analyzed for metals, pesticides, and PCBS. Water-column or SPP toxicity tests were performed with three species. Benthic acute toxicity tests were performed. Bioaccumulation tests were also conducted.« less

Surface-water-quality assessment of the Upper Illinois River basin in Illinois, Indiana, and Wisconsin; cross-sectional and depth variation of water-quality constituents and properties in the Upper Illinois River basin, 1987-88

USGS Publications Warehouse

Marron, Donna C.; Blanchard, Stephen F.

1995-01-01

Data on water velocity, temperature, specific con- ductance, pH, dissolved oxygen concentration, chlorophyll concentration, suspended sediment con- centration, fecal-coliform counts, and the percen- tage of suspended sediment finer than 62 micrometers ranged up to 21 percent; and cross-section coefficients of variation of the concentrations of suspended sediment, fecal coliform, and chlorophyll ranged from 7 to 115 percent. Midchannel measure- ments of temperature, specific conductance, and pH were within 5 percent of mean cross-sectional values of these properties at the eight sampling sites, most of which appear well mixed because of the effect of dams and reservoirs. Measurements of the concentration of dissolved oxygen at various cross- section locations and at variable sampling depths are required to obtain a representative value of this constituent at these sites. The large varia- bility of concentrations of chlorophyll and suspended sediment, and fecal-coliform counts at the eight sampling sites indicates that composite rather than midchannel or mean values of these constituents are likely to be most representative of the channel cross section.

Fungi from Admiralty Bay (King George Island, Antarctica) Soils and Marine Sediments.

PubMed

Wentzel, Lia Costa Pinto; Inforsato, Fábio José; Montoya, Quimi Vidaurre; Rossin, Bruna Gomes; Nascimento, Nadia Regina; Rodrigues, André; Sette, Lara Durães

2018-06-19

Extreme environments such as the Antarctic can lead to the discovery of new microbial taxa, as well as to new microbial-derived natural products. Considering that little is known yet about the diversity and the genetic resources present in these habitats, the main objective of this study was to evaluate the fungal communities from extreme environments collected at Aldmiralty Bay (Antarctica). A total of 891 and 226 isolates was obtained from soil and marine sediment samples, respectively. The most abundant isolates from soil samples were representatives of the genera Leucosporidium, Pseudogymnoascus, and a non-identified Ascomycota NIA6. Metschnikowia sp. was the most abundant taxon from marine samples, followed by isolates from the genera Penicillium and Pseudogymnoascus. Many of the genera were exclusive in marine sediment or terrestrial samples. However, representatives of eight genera were found in both types of samples. Data from non-metric multidimensional scaling showed that each sampling site is unique in their physical-chemical composition and fungal community. Biotechnological potential in relation to enzymatic production at low/moderate temperatures was also investigated. Ligninolytic enzymes were produced by few isolates from root-associated soil. Among the fungi isolated from marine sediments, 16 yeasts and nine fungi showed lipase activity and three yeasts and six filamentous fungi protease activity. The present study permitted increasing our knowledge on the diversity of fungi that inhabit the Antarctic, finding genera that have never been reported in this environment before and discovering putative new species of fungi.

Organic compounds and trace elements in fish tissue and bed sediment from streams in the Yellowstone River basin, Montana and Wyoming, 1998

USGS Publications Warehouse

Peterson, David A.; Boughton, Gregory K.

2000-01-01

A comprehensive water-quality investigation of the Yellowstone River Basin began in 1997, under the National Water-Quality Assessment (NAWQA) Program. Twenty-four sampling sites were selected for sampling of fish tissue and bed sediment during 1998. Organic compounds analyzed included organochlorine insecticides and their metabolites and total polychlorinated biphenyls (PCBs) from fish-tissue and bed-sediment samples, and semivolatile organic compounds from bed-sediment samples. A broad suite of trace elements was analyzed from both fish-tissue and bed-sediment samples, and a special study related to mercury also was conducted. Of the 12 organochlorine insecticides and metabolites detected in the fish-tissue samples, the most compounds per site were detected in samples from integrator sites which represent a mixture of land uses. The presence of DDT, and its metabolites DDD and DDE, in fish collected in the Yellowstone Park area likely reflects long-term residual effects from historical DDT-spraying programs for spruce budworm. Dieldrin, chlordane, and other organic compounds also were detected in the fish-tissue samples. The compound p, p'-DDE was detected at 71 percent of the sampling sites, more than any other compound. The concentrations of total DDT in fish samples were low, however, compared to concentrations from historical data from the study area, other NAWQA studies in the Rocky Mountains, and national baseline concentrations. Only 2 of the 27 organochlorine insecticides and metabolites and total PCBs analyzed in bed sediment were detected. Given that 12 of the compounds were detected in fish-tissue samples, fish appeared to be more sensitive indicators of contamination than bed sediment.Concentrations of some trace elements in fish and bed sediment were higher at sites in mineralized areas than at other sites. Concentrations of selenium in fish tissue from some sites were above background levels. Concentrations of arsenic, chromium, copper, and lead in some of the bed-sediment samples potentially exceeded criteria for the protection of aquatic life.

A fingerprinting mixing model approach to generate uniformly representative solutions for distributed contributions of sediment sources in a Pyrenean drainage basin

NASA Astrophysics Data System (ADS)

Palazón, Leticia; Gaspar, Leticia; Latorre, Borja; Blake, Will; Navas, Ana

2014-05-01

Spanish Pyrenean reservoirs are under pressure from high sediment yields in contributing catchments. Sediment fingerprinting approaches offer potential to quantify the contribution of different sediment sources, evaluate catchment erosion dynamics and develop management plans to tackle the reservoir siltation problems. The drainage basin of the Barasona reservoir (1509 km2), located in the Central Spanish Pyrenees, is an alpine-prealpine agroforest basin supplying sediments to the reservoir at an annual rate of around 350 t km-2 with implications for reservoir longevity. The climate is mountain type, wet and cold, with both Atlantic and Mediterranean influences. Steep slopes and the presence of deep and narrow gorges favour rapid runoff and large floods. The ability of geochemical fingerprint properties to discriminate between the sediment sources was investigated by conducting the nonparametric Kruskal-Wallis H-test and a stepwise discriminant function analysis (minimization of Wilk's lambda). This standard procedure selects potential fingerprinting properties as optimum composite fingerprint to characterize and discriminate between sediment sources to the reservoir. Then the contribution of each potential sediment source was assessed by applying a Monte Carlo mixing model to obtain source proportions for the Barasona reservoir sediment samples. The Monte Carlo mixing model was written in C programming language and designed to deliver a user-defined number possible solutions. A Combinatorial Principals method was used to identify the most probable solution with associated uncertainty based on source variability. The unique solution for each sample was characterized by the mean value and the standard deviation of the generated solutions and the lower goodness of fit value applied. This method is argued to guarantee a similar set of representative solutions in all unmixing cases based on likelihood of occurrence. Soil samples for the different potential sediment sources of the drainage basin were compared with samples from the reservoir using a range of different fingerprinting properties (i.e. mass activities of environmental radionuclides, elemental composition and magnetic susceptibility) analyzed in the < 63 μm sediment fraction. In this case, the 100 best results from 106 generated iterations were selected obtaining a goodness of fit higher than 0.76. The preliminary results using this new data processing methodology for samples collected in the reservoir allowed us to identify cultivated fields and badlands as main potential sources of sediments to the reservoir. These findings support the appropriate use of the fingerprinting methodology in a Spanish Pyrenees basin, which will enable us to better understand the basin sediment production of the Barasona reservoir.

Suspended sediment transport under estuarine tidal channel conditions

USGS Publications Warehouse

Sternberg, R.W.; Kranck, K.; Cacchione, D.A.; Drake, D.E.

1988-01-01

A modified version of the GEOPROBE tripod has been used to monitor flow conditions and suspended sediment distribution in the bottom boundary layer of a tidal channel within San Francisco Bay, California. Measurements were made every 15 minutes over three successive tidal cycles. They included mean velocity profiles from four electromagnetic current meters within 1 m of the seabed; mean suspended sediment concentration profiles from seven miniature nephelometers operated within 1 m of the seabed; near-bottom pressure fluctuations; vertical temperature gradient; and bottom photographs. Additionally, suspended sediment was sampled from four levels within 1 m of the seabed three times during each successive flood and ebb cycle. While the instrument was deployed, STD-nephelometer measurements were made throughout the water column, water samples were collected each 1-2 hours, and bottom sediment was sampled at the deployment site. From these measurements, estimates were made of particle settling velocity (ws) from size distributions of the suspended sediment, friction velocity (U*) from the velocity profiles, and reference concentration (Ca) was measured at z = 20 cm. These parameters were used in the suspended sediment distribution equations to evaluate their ability to predict the observed suspended sediment profiles. Three suspended sediment particle conditions were evaluated: (1) individual particle size in the 4-11 ?? (62.5-0.5 ??m) range with the reference concentration Ca at z = 20 cm (C??), (2) individual particle size in the 4-6 ?? size range, flocs representing the 7-11 ?? size range with the reference concentration Ca at z = 20 cm (Cf), and (3) individual particle size in the 4-6 ?? size range, flocs representing the 7-11 ?? size range with the reference concentration predicted as a function of the bed sediment size distribution and the square of the excess shear stress. In addition, computations of particle flux were made in order to show vertical variations in horizontal mass flux for varying flow conditions. ?? 1988.

River Flow Impacts Bacterial and Archaeal Community Structure in Surface Sediments in the Northern Gulf of Mexico.

PubMed

Ortmann, Alice C; Brannock, Pamela M; Wang, Lei; Halanych, Kenneth M

2018-04-17

Meiobenthic community structure in the northern Gulf of Mexico has been shown to be driven by geographical differences due to inshore-offshore gradients and location relative to river discharge. Samples collected along three transects spanning Mobile Bay, Alabama, showed significant differences in meiobenthic communities east of the bay compared to those sampled from the west. In contrast, analysis of bacterial and archaeal communities from the same sediment samples shows that the inshore-offshore gradient has minimal impact on their community structure. Significant differences in community structure were observed for Bacteria and Archaea between the east and west samples, but there was no difference in richness or diversity. Grouped by sediment type, higher richness was observed in silty samples compared to sandy samples. Significant differences were also observed among sediment types for community structure with bacteria communities in silty samples having more anaerobic sulfate reducers compared to aerobic heterotrophs, which had higher abundances in sandy sediments. This is likely due to increased organic matter in the silty sediments from the overlying river leading to low oxygen habitats. Most archaeal sequences represented poorly characterized high-level taxa, limiting interpretation of their distributions. Overlap between groups based on transect and sediment characteristics made determining which factor is more important in structuring bacterial and archaeal communities difficult. However, both factors are driven by discharge from the Mobile River. Although inshore-offshore gradients do not affect Bacteria or Archaea to the same extent as the meiobenthic communities, all three groups are strongly affected by sediment characteristics.

Associations between degraded benthic communities and contaminated sediments: Sabine Lake, Lake Pontchartrain, and Choctawhatchee Bay

DOE Office of Scientific and Technical Information (OSTI.GOV)

Engle, V.D.; Summers, J.K.; Macauley, J.M.

1994-12-31

The Environmental Monitoring and Assessment Program for Estuaries (EMAP-E) in the Gulf of Mexico supplements its base sampling effort each year with localized, intensive spatial sampling in selected large estuarine systems. By selecting random locations within 70 km{sup 2} hexagonal areas, individual estuaries were sampled using EMAP methods but at four times the density as base sampling. In 1992, 19 sites were sampled in Lake Pontchartrain, Louisiana. In 1 993, 18 sites were sampled in Sabine Lake, Texas and 12 sites were sampled in Choctawhatchee Bay, Florida. At all sites, sediment grabs were taken and analyzed for benthic species compositionmore » and abundance, for toxicity to Ampelisca, and for organic and inorganic sediment contaminants. An indicator of biotic integrity, the benthic index, was calculated to represent the status of benthic communities. A series of statistical techniques, such as stepwise regression analysis, were employed to determine whether the variation in the benthic index could be associated with variation in sediment contaminants, sediment toxicity, or levels of dissolved oxygen. Spatial distributions of these parameters were examined to determine the geographical co-occurrence of degraded benthic communities and environmental stressors. In Lake Pontchartrain, for example, 85% of the variation in the benthic index was associated with decreased levels of dissolved oxygen, and increased concentrations of PCBs, alkanes, copper, tin, and zinc in the sediments.« less

[Distribution Characteristics and Pollution Status Evaluation of Sediments Nutrients in a Drinking Water Reservoir].

PubMed

Huang, Ting-lin; Liu, Fei; Shi, Jian-chao

2016-01-15

The main purpose of this paper is to illustrate the influence of nutrients distribution in sediments on the eutrophication of drinking water reservoir. The sediments of three representative locations were field-sampled and analyzed in laboratory in March 2015. The distribution characteristics of TOC, TN and TP were measured, and the pollution status of sediments was evaluated by the comprehensive pollution index and the manual for sediment quality assessment. The content of TOC in sediments decreased with depth, and there was an increasing trend of the nitrogen content. The TP was enriched in surface sediment, implying the nutrients load in Zhoucun Reservoir was aggravating as the result of human activities. Regression analysis indicated that the content of TOC in sediments was positively correlated with contents of TN and TP in sediments. The TOC/TN values reflected that the vascular land plants, which contain cellulose, were the main source of organic matter in sediments. The comprehensive pollution index analysis result showed that the surface sediments in all three sampling sites were heavily polluted. The contents of TN and TP of surface sediments in three sampling sites were 3273-4870 mg x kg(-1) and 653-2969 mg x kg(-1), and the content of TOC was 45.65-83.00 mg x g(-1). According to the manual for sediment quality assessment, the TN, TP and TOC contents in sediments exceed the standard values for the lowest level of ecotoxicity, so there is a risk of eutrophication in Zhoucun Reservoir.

Controlling suspended sediment samplers by programmable calculator and interface circuitry

Treesearch

Rand E. Eads; Mark R. Boolootian

1985-01-01

A programmable calculator connected to an interface circuit can control automatic samplers and record streamflow data. The circuit converts a voltage representing water stage to a digital signal. The sampling program logs streamflow data when there is a predefined deviation from a linear trend in the water elevation. The calculator estimates suspended sediment...

Assessing Biological and Stratigraphic Determinants of Fossil Abundance: A Case Example from the Late Quaternary of Po Plain, Italy

NASA Astrophysics Data System (ADS)

Kowalewski, Michal; Azzarone, Michele; Kusnerik, Kristopher; Dexter, Troy; Wittmer, Jacalyn; Scarponi, Daniele

2017-04-01

Absolute fossil abundance [AFA] can be defined as a relative concentration of identifiable fossils per unit of sediment. AFA, or "sediment shelliness", is controlled by the interplay between the rate of input of skeletal remains (biological productivity), pace of shell destruction (taphonomy), rate of sedimentation, and sediment compaction. Understanding the relative importance of those drivers can augment both stratigraphic and biological interpretations of the fossil record. Using 336 samples from a network of late Quaternary cores drilled in Po Plain (Italy), we examined the importance of those factors in controlling the stratigraphic distribution of fossils. All samples were vertically and volumetrically equivalent, each representing a 10 cm long interval of a core with a diameter of 7 cm ( 0.375 dm3 sediment per sample). Sample-level estimates of AFA (1) varied over 4 orders of magnitudes (from <4 to 44200 specimens per dm3 of sediment); (2) appeared invariant to core depth (rho=-0.04, p=0.72); (3) were statistically indistinguishable (chi-square=1.53, p=0.46) across systems tracts; and (4) did not vary substantially across facies (chi-square=6.04, p=0.20) representing a wide range of depositional and taphonomic settings. These outcomes indicate that compaction (which should increase downcore), sedimentation rates (which vary predictably across systems tracts), and pace of shell destruction (expected to differ across depositional settings) are unlikely to have played important role in controlling fossils density in the sampled cores. In contrast, samples with very high shell density (AFA > 4000 specimens per dm3) were characterized by exceedingly low evenness reflecting dominance by one super-abundant species (Berger-Parker index > 0.8 in all cases). These super-abundant species were limited to small r-selective mollusks capable of an explosive population growth: the marine corbulid bivalve Lentidium mediterraneum and the brackish hyrdobiid gastropod Ecrobia ventrosa. Moreover, despite high mollusk diversity (534 species total), >80% of samples are dominated by one of the five mollusk species, which all represent small, r-selective, deposit and suspension feeders. Trends in absolute fossil abundance within late Quaternary deposits of the Po Plain appear to have been driven primarily by biological productivity of opportunistic shelly species from lowest trophic levels. In the studied system, biodiversity and shelliness of samples is unlikely to reflect stratigraphic or taphonomic overprints, but rather records the ecological importance of r-selective species that dominated the investigated area throughout the late Quaternary. The joint consideration of sequence stratigraphy, facies architecture, and paleontological data, can provide insights regarding both stratigraphic (the origin of sedimentary biofabrics) and biological (the drivers of bio-productivity and observed biodiversity) aspects of the fossil record.

Yeast diversity associated to sediments and water from two Colombian artificial lakes

PubMed Central

Silva-Bedoya, L.M.; Ramírez-Castrillón, M.; Osorio-Cadavid, E.

2014-01-01

In Colombia, knowledge of the yeast and yeast-like fungi community is limited because most studies have focused on species with clinical importance. Sediments and water represent important habitats for the study of yeast diversity, especially for yeast species with industrial, biotechnological, and bioremediation potential. The main purpose of this study was to identify and compare the diversity of yeast species associated with sediment and water samples from two artificial lakes in Universidad del Valle (Cali-Colombia). Yeast samplings were performed from fifteen sediment samples and ten water samples. Grouping of similar isolates was initially based on colony and cell morphology, which was then complemented by micro/mini satellite primed PCR banding pattern analysis by using GTG5 as single primer. A representative isolate for each group established was chosen for D1/D2 domain sequencing and identification. In general, the following yeast species were identified: Candida albicans, Candida diversa, Candida glabrata, Candida pseudolambica, Cryptococcus podzolicus, Cryptococcus rajasthanensis, Cryptococcus laurentii, Williopsis saturnus, Hanseniaspora thailandica, Hanseniaspora uvarum, Rhodotorula mucilaginosa, Saccharomyces cerevisiae, Torulaspora delbrueckii, Torulaspora pretoriensis, Tricosporon jirovecii, Trichosporon laibachii and Yarrowia lypolitica. Two possible new species were also found, belonging to the Issatchenkia sp. and Bullera sp. genera. In conclusion, the lakes at the Universidad del Valle campus have significant differences in yeast diversity and species composition between them. PMID:24948924

Ecological evaluation of proposed dredged material from St. Andrew Bay, Florida

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mayhew, H.L.; Word, J.Q.; Kohn, N.P.

1993-10-01

The US Army Corps of Engineers (USACE), Mobile District, requested that the Battelle/Marine Sciences Laboratory (MSL) conduct field sampling and chemical and biological testing to determine the suitability of potential dredged material for open ocean disposal. Sediment from St. Andrew Bay was chemically characterized and evaluated for biological toxicity and bioaccumulation of contaminants. The Tier III guidance for ocean disposal testing requires tests of water column effects (following dredged material disposal), deposited sediment toxicity, and bioaccumulation of contaminants from deposited sediment (dredged material). To meet these requirements, the MSL conducted suspended-particulate-phase (SPP) toxicity tests, solid-phase toxicity tests, and bioaccumulation testingmore » on sediment representing potential dredged material from Panama City Harbor. Physical and chemical characterization of sediment to support toxicity and bioaccumulation results was also conducted on both the test and reference sediments. The MSL collected sediment samples from five sites in St. Andrew Bay and one reference site near Lands End Peninsula. The five test sediments and the reference sediment were analyzed for physical and chemical sediment characteristics, SPP chemical contaminants, solid-phase toxicity, SPP toxicity, and bioaccumulation of contaminants.« less

Biomonitoring for deposited sediment using benthic invertebrates: A test on 4 Missouri streams

USGS Publications Warehouse

Zweig, L.D.; Rabeni, Charles F.

2001-01-01

The response of stream benthic invertebrates to surficially deposited fine sediment was investigated in 4 Missouri streams. Twenty to 24 sampling sites in each stream were selected based on similarities of substrate particle-size distributions, depths, and current velocities but for differences in amounts of deposited sediment, which ranged from 0 to 100% surface cover. Deposited sediment was quantified 2 ways: a visual estimate of % surface cover, and a measurement of substrate embeddedness, which were highly correlated with each other and with the amount of sand. Invertebrates were collected using a kicknet for a specified time in a 1-m2 area. Five commonly used biomonitoring metrics (taxa richness, density, Ephemeroptera, Plecoptera, and Trichoptera [EPT] richness, EPT density, and EPT/Chironomidae richness) were consistently significantly correlated across streams to deposited sediment. Shannon diversity index, Chironomidae richness, Chironomidae density, a biotic index, and % dominant taxon did not relate to increasing levels of deposited sediment. Tolerance values representing taxa responses to deposited sediment were developed for 30 taxa. Deposited-sediment tolerance values were not correlated with biotic index tolerance values, indicating a different response by taxa to deposited sediment than to organic enrichment. Deposited-sediment tolerance values were used to develop the Deposited Sediment Biotic Index (DSBI). The DSBI was calculated for all samples (n = 85) to characterize sediment impairment of the sampled streams. DSBI values for each site were highly correlated with measures of deposited sediment. Model validation by a resampling procedure confirmed that the DSBI is a potentially useful tool for assessing ecological effects of deposited sediment.

Evaluation of toxicity to the amphipod, Hyalella azteca, and to the midge, Chironomus dilutus; and bioaccumulation by the oligochaete, Lumbriculus variegatus, with exposure to PCB-contaminated sediments from Anniston, Alabama

USGS Publications Warehouse

Ingersoll, Christopher G.; Steevens, Jeffery A.; MacDonald, Donald D.; Brumbaugh, William G.; Coady, Matthew R.; Farrar, J. Daniel; Lotufo, Guilherme R.; Kemble, Nile E.; Kunz, James L.; Stanley, Jacob K.; Sinclair, Jesse A.; Ingersoll, Christopher G.; Steevens, Jeffery A.; MacDonald, Donald D.

2014-01-01

The U.S. Environmental Protection Agency (USEPA) requested that as part of the remedial investigation for the Anniston, Alabama Polychlorinated Biphenyl (PCB) Site (Anniston PCB Site), that Pharmacia Corporation and Solutia Inc. (P/S) perform long-term reproduction toxicity tests with the amphipod, Hyalella azteca, and the midge, Chironomus dilutus, and bioaccumulation tests with the oligochaete, Lumbriculus variegatus, using sediment samples collected from reference locations and from Operable Unit 4 of the Anniston PCB Site. The sediment toxicity testing and sediment bioaccumulation results will be used by ARCADIS U.S., Inc. (ARCADIS) as part of a weight-of-evidence assessment to evaluate risks and establish sediment remediation goals for contaminants to sediment-dwelling organisms inhabiting the Anniston PCB Site. The goal of this study was to characterize relations between sediment chemistry and sediment toxicity and relations between sediment chemistry and sediment bioaccumulation in samples of sediments collected from the Anniston PCB Site. A total of 32 samples were evaluated from six test sites and one reference site to provide a wide range in concentrations of chemicals of potential concern (COPCs) including PCBs in samples of whole sediment. The goal of this study was not to determine the extent of sediment contamination across the Anniston PCB Site. Hence, the test sites or samples collected from within a test site were not selected to represent the spatial extent of sediment contamination across the Anniston PCB Site. Sediment chemistry, pore-water chemistry, and sediment toxicity data were generated for 26 sediment samples from the Anniston PCB Site. All of the samples were evaluated to determine if they qualified as reference sediment samples. Those samples that met the chemical selection criteria and biological selection criteria were identified as reference samples and used to develop the reference envelope for each toxicity test endpoint. Physical characterization of samples of whole sediment included analyses of grain size, TOC, and nutrients. Organic chemical characterization of samples of whole sediment included PCB homologs and select (13) PCB congeners, parent and alkylated polycyclic aromatic hydrocarbons (PAHs), organochlorine pesticides, and polychlorinated dibenzo-p-dioxins; and dibenzofurans. The PCB aroclors analyzed included 1016, 1221, 1232, 1242, 1248, 1254, 1260, 1262 and 1268. Analyses of whole sediment also included total metals, simultaneously extracted metals, and acid volatile sulfide. Chemical characterization of samples of pore water isolated from samples of whole sediment at the start of the sediment toxicity exposures or at the start of the sediment bioaccumulation exposures included metals, major cations, major anions, dissolved organic carbon, and additional water-quality characteristics. Concentrations of metals or PCBs in pore water during the sediment toxicity exposures or during sediment bioaccumulation exposures also were determined using peeper samples (for metals) or solid-phase microextraction (SPME) samplers (for PCBs). The bioavailability and bioaccumulation of PCBs in 14 sediment samples were investigated using SPME passive samplers and the 28-d L. variegatus whole-sediment bioaccumulation exposures In general the accumulation of PCBs consistently was predicted through the use of organic carbon normalization and equilibrium partitioning. In these sediments, PCB homologs were accumulated differently based on bioavailability and potential to accumulate in oligochaetes. As part of this assessment homolog specific biota sediment accumulation factor values were developed that could be applied across the larger site to predict tissue levels of PCBs. The whole-sediment toxicity tests done with H. azteca and C. dilutus met the established ASTM and USEPA test acceptability criteria. The most responsive H. azteca endpoints were day 42 survival normalized young per female and day 28 biomass and that the most responsive C. dilutus endpoints were adult biomass and percent adult emergence. Overall, between the two species, the most responsive endpoint assessed for these two species was H. azteca survival-normalized young per female (67 percent of the samples classified as toxic). Concentration-response models (CRMs) and site-specific sediment toxicity thresholds (TTs) were generated with matching sediment chemistry and sediment toxicity data. Sediment chemistry, pore-water chemistry, and sediment toxicity data were evaluated for as many as 26 sediment samples from the Anniston PCB Site. The reference-envelope approach was used to identify the sediment samples that were toxic to benthic invertebrates. This procedure involved identification of reference sediment samples, normalizing the toxicity data to reflect control responses, developing a reference envelope for each toxicity test endpoint, and designating each sediment sample as toxic or not toxic for each toxicity test endpoint, for each species, and for all species combined. These results demonstrated percent emergence of adult C. dilutus, biomass of adult C. dilutus, and reproduction of H. azteca normalized to percent survival were among the most responsive endpoints that were evaluated. Therefore, these endpoints were selected for CRM development. The site-specific TTs for whole sediment provide a reliable basis for identifying toxic and not toxic sediment samples in the Anniston PCB Site (that is, for correctly classifying the sediment samples used to derive the TTs as toxic or not toxic, for the endpoint used to derive the TTs). Among the 69 TTs for sediment, the TTLRs for total PCB homologs [499 to 1,870 micrograms per kilogram dry weight (μg/kg DW)] and for lead [(9.48 to 10.3 milligrams per kilogram (mg/kg) DW] based on reproduction of H. azteca or based on emergence or biomass of adult C. dilutus, were the most reliable. Such TTs had low rates of false negative errors (that is, only 0 to 11 percent of the samples below the TT were toxic to benthic invertebrates), low rates of false positive errors (only 0 to 6 percent of the samples greater than the TT were not toxic to benthic invertebrates), and high rates of correct classification (that is, 92 to 96 percent). The site-specific TTs for PCBs and other COPCs derived in this study also were compared to empirically based sediment quality guidelines (SQGs), to equilibrium-partitioning based SQGs, and to the results of spiked-sediment toxicity tests. The results of this evaluation indicated that the site-specific sediment TTs for PCBs were comparable to the consensus-based SQGs that were derived for PCBs. In addition, the site-specific sediment TTs for PCBs are well within the range of SQGs derived using the equilibrium partitioning approach. The site-specific sediment TTs for PCBs also are consistent with the results of chronic TTs that have been estimated for benthic invertebrates using the results of spiked-sediment toxicity tests. As the site-specific sediment TTs for PCBs are consistent with empirically based SQGs, equilibrium-partitioning based SQGs, and results of sediment-spiking studies, these site- specific sediment TTs likely represent the concentrations of PCBs that are sufficient to cause toxicity to benthic invertebrates (as opposed to simply being correlated with adverse effects on the survival, weight, or reproduction of benthic invertebrates). Importantly, such site-specific sediment TTs have been demonstrated to accurately classify sediment samples as toxic or not toxic to benthic invertebrates at the Anniston PCB Site. In contrast, the TTs for metals, PAHs, and organochlorine pesticides were generally lower than consensus-based SQGs (that is, probable effect concentrations), and LC50s (median lethal effect concentrations) generated in spiked-sediment toxicity tests, indicating that these COPCs are likely not the main contributors to the observed toxicity of the site sediments evaluated in this study. The reproduction endpoint for H. azteca provided lower TTs compared to the day 28 biomass endpoint for H. azteca and the emergence or biomass endpoints for adult C. dilutus provided lower TTs compared to the day 13 biomass endpoint for C. dilutus.

Heavy metals in red crabs, Chaceon quinquedens, from the Gulf of Mexico.

PubMed

Perry, Harriet; Isphording, Wayne; Trigg, Christine; Riedel, Ralf

2015-12-30

The red crab, Chaceon quinquedens, is distributed in deep waters of the Gulf of Mexico (GOM) and is most abundant in an area associated with sediment deposition from the Mississippi River. Sediment geochemistry and biological and ecological traits of red crabs favor accumulation of contaminants. Red crabs, sediment, and bottom water samples were taken from three distinct geographic locations representing areas with differing exposure to contaminant laden effluents from the Mississippi River. Inductively coupled plasma spectrophotometry and atomic absorption spectrophotometry were employed to determine levels of heavy metals in red crab muscle tissue. Ion site partitioning was used to determine metal speciation in sediments. Red crabs showed evidence of heavy metal bioaccumulation in all sample areas with high variability in contaminant levels in individual crabs for some metals. Bioavailability of metals in sediment did not always result in accumulation in muscle tissue. Copyright © 2015 Elsevier Ltd. All rights reserved.

Quantifying the seasonal variations in fluvial and eolian sources of terrigenous material to Cariaco Basin, Venezuela

NASA Astrophysics Data System (ADS)

Elmore, Aurora C.; Thunell, Robert C.; Styles, Richard; Black, David; Murray, Richard W.; Martinez, Nahysa; Astor, Yrene

2009-02-01

The varved sediments that accumulate in the Cariaco Basin provide a detailed archive of the region's climatic history, including a record of the quantity of fluvial and wind-transported material. In this study, we examine the sedimentological characteristics (clay mineralogy and grain size) of both surface sediments and sinking lithogenic material collected from sediment trap samples over a three-year period from 1997 to 2000. Data from biweekly sediment trap samples show a tri-modal particle size distribution, with prominent peaks at 2, 22 and 80 μm, indicating sediment contributions from both eolian and fluvial sources. The clay mineralogy of the water column samples collected from 1997 to 1999 also shows distinctive characteristics of eolian and fluvial material. An examination of surface sediment samples from the Cariaco Basin indicates that the Unare River is the main source of riverine sediments to the eastern sub-basin. By combining these sedimentological proxies, we estimate that ˜10% of the terrigenous material delivered to the Cariaco Basin is eolian, while ˜90% is fluvial. This represents an annual dust accumulation rate of ˜0.59 mg/cm 2/yr. Since aerosols are closely linked to climate variability, the ability to quantify paleo-dust fluxes using sedimentological characteristics will be a useful tool for future paleoclimate studies looking at sub-Saharan aridity and latitudinal migration of the Intertropical Convergence Zone.

Widespread Anthropogenic Nitrogen in Northwestern Pacific Ocean Sediment.

PubMed

Kim, Haryun; Lee, Kitack; Lim, Dhong-Il; Nam, Seung-Il; Kim, Tae-Wook; Yang, Jin-Yu T; Ko, Young Ho; Shin, Kyung-Hoon; Lee, Eunil

2017-06-06

Sediment samples from the East China and Yellow seas collected adjacent to continental China were found to have lower δ 15 N values (expressed as δ 15 N = [ 15 N: 14 N sample / 15 N: 14 N air - 1] × 1000‰; the sediment 15 N: 14 N ratio relative to the air nitrogen 15 N: 14 N ratio). In contrast, the Arctic sediments from the Chukchi Sea, the sampling region furthest from China, showed higher δ 15 N values (2-3‰ higher than those representing the East China and the Yellow sea sediments). Across the sites sampled, the levels of sediment δ 15 N increased with increasing distance from China, which is broadly consistent with the decreasing influence of anthropogenic nitrogen (N ANTH ) resulting from fossil fuel combustion and fertilizer use. We concluded that, of several processes, the input of N ANTH appears to be emerging as a new driver of change in the sediment δ 15 N value in marginal seas adjacent to China. The present results indicate that the effect of N ANTH has extended beyond the ocean water column into the deep sedimentary environment, presumably via biological assimilation of N ANTH followed by deposition. Further, the findings indicate that N ANTH is taking over from the conventional paradigm of nitrate flux from nitrate-rich deep water as the primary driver of biological export production in this region of the Pacific Ocean.

Organic compounds and cadmium in the tributaries to the Elizabeth River in New Jersey, October 2008 to November 2008: Phase II of the New Jersey Toxics Reduction Workplan for New York-New Jersey Harbor

USGS Publications Warehouse

Bonin, Jennifer L.

2010-01-01

Samples of surface water and suspended sediment were collected from the two branches that make up the Elizabeth River in New Jersey - the West Branch and the Main Stem - from October to November 2008 to determine the concentrations of selected chlorinated organic and inorganic constituents. The sampling and analyses were conducted as part of Phase II of the New York-New Jersey Harbor Estuary Plan-Contaminant Assessment and Reduction Program (CARP), which is overseen by the New Jersey Department of Environmental Protection. Phase II of the New Jersey Workplan was conducted by the U.S. Geological Survey to define upstream tributary and point sources of contaminants in those rivers sampled during Phase I work, with special emphasis on the Passaic and Elizabeth Rivers. This portion of the Phase II study was conducted on the two branches of the Elizabeth River, which were previously sampled during July and August of 2003 at low-flow conditions. Samples were collected during 2008 from the West Branch and Main Stem of the Elizabeth River just upstream from their confluence at Hillside, N.J. Both tributaries were sampled once during low-flow discharge conditions and once during high-flow discharge conditions using the protocols and analytical methods that were used in the initial part of Phase II of the Workplan. Grab samples of streamwater also were collected at each site and were analyzed for cadmium, suspended sediment, and particulate organic carbon. The measured concentrations, along with available historical suspended-sediment and stream-discharge data were used to estimate average annual loads of suspended sediment and organic compounds in the two branches of the Elizabeth River. Total suspended-sediment loads for 1975 to 2000 were estimated using rating curves developed from historical U.S. Geological Survey suspended-sediment and discharge data, where available. Concentrations of suspended-sediment-bound polychlorinated biphenyls (PCBs) in the Main Stem and the West Branch of the Elizabeth River during low-flow conditions were 534 ng/g (nanograms per gram) and 1,120 ng/g, respectively, representing loads of 27 g/yr (grams per year) and 416 g/yr, respectively. These loads were estimated using contaminant concentrations during low flow, and the assumed 25-year average discharge, and 25-year average suspended-sediment concentration. Concentrations of suspended-sediment-bound PCBs in the Main Stem and the West Branch of the Elizabeth River during high-flow conditions were 3,530 ng/g and 623 ng/g, respectively, representing loads of 176 g/yr and 231 g/yr, respectively. These loads were estimated using contaminant concentrations during high-flow conditions, the assumed 25-year average discharge, and 25-year average suspended-sediment concentration. Concentrations of suspended-sediment-bound polychlorinated dibenzo-p-dioxins and polychlorinated dibenzo-p-difuran compounds (PCDD/PCDFs) during low-flow conditions were 2,880 pg/g (picograms per gram) and 5,910 pg/g in the Main Stem and West Branch, respectively, representing average annual loads of 0.14 g/yr and 2.2 g/yr, respectively. Concentrations of suspended-sediment-bound PCDD/PCDFs during high-flow conditions were 40,900 pg/g and 12,400 pg/g in the Main Stem and West Branch, respectively, representing average annual loads of 2.05 g/yr and 4.6 g/yr, respectively. Total toxic equivalency (TEQ) loads (sum of PCDD/PCDF and PCB TEQs) were 3.1 mg/yr (milligrams per year) (as 2, 3, 7, 8-TCDD) in the Main Stem and 28 mg/yr in the West Branch during low-flow conditions. Total TEQ loads (sum of PCDD/PCDFs and PCBs) were 27 mg/yr (as 2, 3, 7, 8-TCDD) in the Main Stem and 32 mg/yr in the West Branch during high-flow conditions. All of these load estimates, however, are directly related to the assumed annual discharge for the two branches. Long-term measurement of stream discharge and suspended-sediment concentrations would be needed to verify these loads. On the basis of the loads cal

Community genomic analyses constrain the distribution of metabolic traits across the Chloroflexi phylum and indicate roles in sediment carbon cycling

PubMed Central

2013-01-01

Background Sediments are massive reservoirs of carbon compounds and host a large fraction of microbial life. Microorganisms within terrestrial aquifer sediments control buried organic carbon turnover, degrade organic contaminants, and impact drinking water quality. Recent 16S rRNA gene profiling indicates that members of the bacterial phylum Chloroflexi are common in sediment. Only the role of the class Dehalococcoidia, which degrade halogenated solvents, is well understood. Genomic sampling is available for only six of the approximate 30 Chloroflexi classes, so little is known about the phylogenetic distribution of reductive dehalogenation or about the broader metabolic characteristics of Chloroflexi in sediment. Results We used metagenomics to directly evaluate the metabolic potential and diversity of Chloroflexi in aquifer sediments. We sampled genomic sequence from 86 Chloroflexi representing 15 distinct lineages, including members of eight classes previously characterized only by 16S rRNA sequences. Unlike in the Dehalococcoidia, genes for organohalide respiration are rare within the Chloroflexi genomes sampled here. Near-complete genomes were reconstructed for three Chloroflexi. One, a member of an unsequenced lineage in the Anaerolinea, is an aerobe with the potential for respiring diverse carbon compounds. The others represent two genomically unsampled classes sibling to the Dehalococcoidia, and are anaerobes likely involved in sugar and plant-derived-compound degradation to acetate. Both fix CO2 via the Wood-Ljungdahl pathway, a pathway not previously documented in Chloroflexi. The genomes each encode unique traits apparently acquired from Archaea, including mechanisms of motility and ATP synthesis. Conclusions Chloroflexi in the aquifer sediments are abundant and highly diverse. Genomic analyses provide new evolutionary boundaries for obligate organohalide respiration. We expand the potential roles of Chloroflexi in sediment carbon cycling beyond organohalide respiration to include respiration of sugars, fermentation, CO2 fixation, and acetogenesis with ATP formation by substrate-level phosphorylation. PMID:24450983

Spatial distribution of pollen grains and spores in surface sediments of Guanabara Bay, Rio de Janeiro, Brazil.

PubMed

Barreto, Cintia F; Vilela, Claudia G; Baptista-Neto, José A; Barth, Ortrud M

2012-09-01

Aiming to investigate the deposition of pollen grains and spores in Guanabara Bay, Rio de Janeiro State, 61 surface sediment samples were analyzed. The results showed that the current deposition of palynomorphs in surface sediments of Guanabara Bay represents the regional vegetation of this hydrographic basin. The differential distribution of palynomorphs followed a pattern influenced by bathymetry, tidal currents speed, discharge of numerous rivers, and by human activity. The dominance of representatives of Field Vegetation reflects the changes of the original flora caused by intense human activities in the region. The continued presence and richness of pollen types of rain forest in the samples indicates that their source area might be the vegetation from riparian border of rivers in the western sector of the Bay, where the mangrove vegetation is being preserved. The large amount of damaged palynomorphs may be related to abrasion that occurs during river transport, indicating removal or reworking from their areas of origin.

Environmental assessment of creosote-treated pilings in the marine environment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Butala, J.H.; Webb, D.A.; Jop, K.M.

1995-12-31

A comprehensive ecological risk assessment was conducted to evaluate the environmental impact of creosote-treated pilings in the marine environment at Moss Landing Harbor, Moss Landing, California. Four areas of investigation comprising the risk assessment were (1) evaluation of environmental conditions around existing creosote-treated pilings (2) investigating effects related to restoration of pilings (3) assessing creosote migration into surrounding environment, one year after pile-driving and (4) confirmation of creosote toxicity in laboratory studies. Biological and chemical evaluation of the impact of creosote-treated pilings was conducted on surface sheen, water column and sediment samples collected at Moss Landing Harbor. Water samples (surfacemore » sheen, water column and sediment pore water) were evaluated using short-term chronic exposures with Mysidopsis bahia, while bulk sediment samples were evaluated with 10-day sediment toxicity tests with Ampelisca abdita. Samples of surface, column water and sediment were analyzed for the constituents of creosote by GC mass spectrometry. In addition, a sample of neat material used to preserve treated pilings represented a reference for the polyaromatic hydrocarbons. Verification of organism response and analyses of field collected samples was performed by conducting 10-day A. abdita sediment and 7-day M. bahia elutriate exposures with creosote applied to clean sediment collected at Moss Landing, Evaluations were also performed to determine the effects of photoinduced toxicity on test organisms exposed to PAHs. The biological and analytical results of the field and laboratory exposures are being used to evaluate and determine risk of creosote-treated pilings on the marine environment.« less

From picture to porosity of river bed material using Structure-from-Motion with Multi-View-Stereo

NASA Astrophysics Data System (ADS)

Seitz, Lydia; Haas, Christian; Noack, Markus; Wieprecht, Silke

2018-04-01

Common methods for in-situ determination of porosity of river bed material are time- and effort-consuming. Although mathematical predictors can be used for estimation, they do not adequately represent porosities. The objective of this study was to assess a new approach for the determination of porosity of frozen sediment samples. The method is based on volume determination by applying Structure-from-Motion with Multi View Stereo (SfM-MVS) to estimate a 3D volumetric model based on overlapping imagery. The method was applied on artificial sediment mixtures as well as field samples. In addition, the commonly used water replacement method was applied to determine porosities in comparison with the SfM-MVS method. We examined a range of porosities from 0.16 to 0.46 that are representative of the wide range of porosities found in rivers. SfM-MVS performed well in determining volumes of the sediment samples. A very good correlation (r = 0.998, p < 0.0001) was observed between the SfM-MVS and the water replacement method. Results further show that the water replacement method underestimated total sample volumes. A comparison with several mathematical predictors showed that for non-uniform samples the calculated porosity based on the standard deviation performed better than porosities based on the median grain size. None of the predictors were effective at estimating the porosity of the field samples.

Identifying water-quality trends in the Trinity River, Texas, USA, 1969-1992, using sediment cores from Lake Livingston

USGS Publications Warehouse

Van Metre, P.C.; Callender, E.

1996-01-01

Chemical analyses were done on cores of bottom sediment from three locations in Lake Livingston, a reservoir on the Trinity River in east Texas to identify trends in water quality in the Trinity River using the chemical record preserved in bottom sediments trapped by the reservoir. Sediment cores spanned the period from 1969, when the reservoir was impounded, to 1992, when the cores were collected. Chemical concentrations in reservoir sediment samples were compared to concentrations for 14 streambed sediment samples from the Trinity River Basin and to reported concentrations for soils in the eastern United States and shale. These comparisons indicate that sediments deposited in Lake Livingston are representative of the environmental setting of Lake Livingston within the Trinity River Basin. Vertical changes in concentrations within sediment cores indicate temporal trends of decreasing concentrations of lead, sodium, barium, and total DDT (DDT plus its metabolites DDD and DDE) in the Trinity River. Possible increasing temporal trends are indicated for chlordane and dieldrin. Each sediment-derived trend is related to trends in water quality in the Trinity River or known changes in environmental factors in its drainage basin or both.

Occurrences, composition profiles and source identifications of polycyclic aromatic hydrocarbons (PAHs), polybrominated diphenyl ethers (PBDEs) and polychlorinated biphenyls (PCBs) in ship ballast sediments.

PubMed

Su, Peng-Hao; Lv, Bao-Yi; Tomy, Gregg T; Xu, Jin-Xiang; Tian, Wen; Hou, Chun-Yan; Yin, Fang; Li, Yi-Fan; Feng, Dao-Lun

2017-02-01

The aim of this study was to investigate the levels of persistent organic pollutants (POPs) including polycyclic aromatic hydrocarbons (PAHs), polybrominated diphenyl ethers (PBDEs) and polychlorinated biphenyls (PCBs) in ship ballast sediments. The ballast sediment samples were collected from six merchant ships docked in 2015 in Jiangyin City, China. Ballast sediments represent a potential vector for the transport of POPs and invasive species between marine environments. An attempt was also made to determine the sources of these compounds in the ballast sediment. The results indicated ballast sediments generally contain greater amounts of BDE-209 and comparable amounts of PAHs, PBDEs (exclusive of BDE-209) and PCBs compared to those in marine surface sediments. Based on the sediment quality guidelines, PAHs and PCBs in ballast sediments were estimated to have median or high potential of posing ecological risks, respectively, to marine life if ballast sediments were disposed without specific treatment. POPs in ballast sediments were derived from multiple sources with atmospheric deposition being an important origin. Ship activities including diesel exhaust and illegal oil sewage discharge were considerable contributors of certain individual POPs to ballast sediments. Our study is important because it represents the first report on levels, health risk assessment and source apportionments of POPs in ballast sediments and is a first step in the implementation of specific ballast sediment management measures. Copyright © 2016 Elsevier Ltd. All rights reserved.

Chronostratigraphy of a salt marsh sediment core from North Cinder Island in the Town of Hempstead, Long Island, NY, using radiocarbon and pollen

NASA Astrophysics Data System (ADS)

Farmer, E. C.; Browne, J.; Peteet, D. M.; Cochran, K. K.; Heilbrun, C.; Chery, N.; LongJohn, T.; Mayo, J.; Ricigliano, V.

2016-12-01

A 122 cm long sediment core was collected from the salt marsh of North Cinder Island (73.6092W, 40.6097N), a small uninhabited island in Middle Bay between Oceanside and Point Lookout, in the Town of Hempstead, NY, on 2 July 2013, in order to investigate the age of the marsh and the history of trace metal pollution in the area. First, to determine the chronostratigraphy of the core, pollen counts were compared to radiocarbon measurements. Sediment samples at several depths in the core were analyzed for Pine, Oak, Hickory, Birch, Grass (S. alterniflora and S. patens), and Ragweed pollen. The concentration of Ragweed was below 3% in samples below 80cm, and greater than 7% in samples above 80cm. This proliferation of a disturbance species suggests that layers deeper than 81cm were deposited prior to widespread European settlement, sometime in the 1600s AD. Paired radiocarbon measurements on sieved fine sediment at 42-43 cm depth, however, match well with each other (their 1-sigma confidence intervals overlap), but suggest a calendar age between 932 and 997 years before present. Paired radiocarbon measurements from the 60-61 cm depth also match well with each other, but represent an age that is approximately 200 years younger. Additional paired radiocarbon measurements at 78-79 cm and 96-97 cm depths give older ages, as expected stratigraphically. Perhaps the reversal between 43 and 60 cm represents reworking of sediments in the marsh by tidal currents. Interestingly, root matter extracted from the sediment at the same depths gives radiocarbon ages that range from 600-1200 years younger. Perhaps the roots penetrate down through older sediment, or perhaps the fine sediment is comprised of recaptured sediment with lignin or other residual organic matter that is older because it is difficult to break down. This would explain the apparent contradiction between the radiocarbon dates on fine sediment and the younger pollen date at a deeper depth.

Trends in suspended-sediment concentration at selected stream sites in Kansas, 1970-2002

USGS Publications Warehouse

Putnam, James E.; Pope, Larry M.

2003-01-01

Knowledge of erosion, transport, and deposition of sediment relative to streams and impoundments is important to those involved directly or indirectly in the development and management of water resources. Monitoring the quantity of sediment in streams and impoundments is important because: (1) sediment may degrade the water quality of streams for such uses as municipal water supply, (2) sediment is detrimental to the health of some species of aquatic animals and plants, and (3) accumulation of sediment in water-supply impoundments decreases the amount of storage and, therefore, water available for users. One of the objectives of the Kansas Water Plan is to reduce the amount of sediment in Kansas streams by 2010. During the last 30 years, millions of dollars have been spent in Kansas watersheds to reduce sediment transport to streams. Because the last evaluation of trends in suspended-sediment concentrations in Kansas was completed in 1985, 14 sediment sampling sites that represent 10 of the 12 major river basins in Kansas were reestablished in 2000. The purpose of this report is to present the results of time-trend analyses at the reestablished sediment data-collection sites for the period of about 1970?2002 and to evaluate changes in the watersheds that may explain the trends. Time-trend tests for 13 of 14 sediment sampling sites in Kansas for the period from about 1970 to 2002 indicated that 3 of the 13 sites tested had statistically significant decreasing suspended-sediment concentrations; however, only 2 sites, Walnut River at Winfield and Elk River at Elk Falls, had trends that were statistically significant at the 0.05 probability level. Increasing suspended-sediment concentrations were indicated at three sites although none were statistically significant at the 0.05 probability level. Samples from five of the six sampling sites located upstream from reservoirs indicated decreasing suspended-sediment concentrations. Watershed impoundments located in the respective river basins may contribute to the decreasing suspended-sediment trends exhibited at most of the sampling sites because the impoundments are designed to trap sediment. Both sites that exhibited statistically significant decreasing suspended-sediment concentrations have a large number of watershed impoundments located in their respective drainage basins. The relation between percentage of the watershed affected by impoundments and trend in suspended-sediment concentration for 11 sites indicated that, as the number of impoundments in the watershed increases, suspended-sediment concentration decreases. Other conser-vation practices, such as terracing of farm fields and contour farming, also may contribute to the reduced suspended-sediment concentrations if their use has increased during the period of analysis. Regression models were developed for 13 of 14 sediment sampling sites in Kansas and can be used to estimate suspended-sediment concentration if the range in stream discharge for which they were developed is not exceeded and if time trends in suspended-sediment concentrations are not significant. For those sites that had a statistically significant trend in suspended-sediment concentration, a second regression model was developed using samples collected during 2000?02. Past and current studies by the U.S. Geological Survey have shown that regression models can be developed between in-stream measurements of turbidity and laboratory-analyzed sediment samples. Regression models were developed for the relations between discharge and suspended-sediment concentration and turbidity and suspended-sediment concentration for 10 sediment sampling sites using samples collected during 2000?02.

[Pollution characteristics and ecological risk assessment of heavy metals in surface sediments of Qingshan Reservoir in Lin' an City, Zhejiang Province of East China].

PubMed

Zhang, Fen; Yang, Chang-Ming; Pan, Rui-Jie

2013-09-01

A total of 8 representative surface sediment sampling sites were collected from the Qingshan Reservoir in Lin'an City of Zhejiang Province to investigate the differences in the total concentrations of As, Cr, Cu, Ni, Mn, Pb, and Zn among the sampling sites. The different forms of the heavy metals, i. e., acid soluble, easily reducible, easily oxidizable, and residual, were determined by BCR sequential extraction method, and the pollution degrees and potential ecological risk, of the heavy metals in the surface sediments at different sampling sites of the Reservoir were assessed by using geo-accumulation index (I(geo)) and Hakanson potential ecological risk index. There existed obvious spatial differences in the total concentrations of the heavy metals in the surface sediments of the Reservoir. The sampling sites nearby the estuaries of the tributaries flowing through downtowns and heavy industrial parks to the Reservoir had obviously higher heavy metals concentrations in surface sediments, as compared to the other sampling sites. In the sediments, Mn was mainly in acid extractable form, Cu and Pb were mainly in reducible form, and As was mainly in residual form. The surface sediments at the sampling sites nearby the estuaries of the tributaries flowing through downtowns to the Reservoir had higher proportions of acid extractable and reducibles forms of the heavy metals, which would have definite potential toxic risk to aquatic organisms. Among the 7 heavy metals in the surface sediments, As showed the highest pollution degree, followed by Cu, Ni, Mn, Pb, and Zn, which were at moderate pollution degree, while Cr was at non-pollution degree, with relatively low potential ecological risk. Through the comparison of the sampling sites, it was observed that the surface sediments at the sites nearby the estuaries of Jinxi River and Hengxi River flowing through downtowns and heavy industrial parks to the Reservoir showed obviously higher heavy metals pollution degree and potential ecological risk.

Presence and distribution of chlorinated organic compounds in streambed sediments, new jersey

USGS Publications Warehouse

Stackelberg, P.E.

1997-01-01

Concentrations of 18 hydrophobic chlorinated organic compounds in streambed sediments from 100 sites throughout New Jersey were examined to determine (1) which compounds were detected most frequently, (2) whether detection frequencies differed among selected drainage basins, and (3) whether concentrations differed significantly among selected drainage basins. Twelve drainage basins across New Jersey that contain a range of land-use patterns and population densities were selected to represent various types and degrees of development. To ensure an adequate number of samples for statistical comparison among drainage basins, the 12 selected basins were consolidated into seven drainage areas on the basis of similarities in land- use patterns and population densities. Additionally, data for three classes of chlorinated organic compounds in streambed sediments from 255 sites throughout New Jersey were examined to determine whether the presence of these compounds in streambed sediments is related to the type and degree of development within the drainage area of each sampling site. Chlorinated organic compounds detected most frequently within the seven representative drainage areas were DDT, DDE, DDD, chlordane, dieldrin, and PCBs. DDT, DDE, and DDD, which were the most widely distributed organic compounds, were detected in about 60 to 100 percent of the samples from all drainage areas hut one (where the detection rate for these compounds was about 20 to 40 percent). Chlordane and dieldrin were detected in about 80 to 100 percent of samples from highly urbanized and populated drainage areas; detection frequencies for these compounds tended to be smaller in less developed and populated areas. PCBs were detected in about 40 to 85 percent of samples from all drainage areas; detection frequencies were highest in the most heavily developed and populated areas. Analysis of variance on rank-transformed organic compound concentrations normalized to sediment organic carbon content was used to evaluate differences in concentrations among the seven representative drainage areas. Chlordane and PCBs were the chlorinated organic compounds with the most highly elevated concentrations in streambed sediments across the State. Median normalized COncentrations of all six of the most frequently detected chlorinated organic compounds were highest in the most heavily urbanized and populated drainage area and lowest in the less populated, predominantly agricultural or forested areas. Concentrations of DDT and DDE, however, did not differ significantly among most of the drainage areas. Concentrations of DDD, chlordane, dieldrin, and PCBs differed significantly among drainage areas. The highest median normalized concentrations were found in samples from the most heavily urbanized and populated areas, and the lowest were in samples from the least developed, most heavily forested area. Logistic regression was used to examine relations between the presence of hydrophobic chlorinated organic compounds in streambed sediments at specified concentrations and variables that characterize the type and degree of development within the drainage areas of 255 sites across New Jersey. The explanatory variables found most useful for predicting the presence of chlorinated organic compounds in streambed sediments include total population and amounts (in square kilometers) of various land-use categories. Logistic regression equations were developed to identify significant relations between population and amounts of specific land-use categories within drainage areas and the probability of detecting chlorinated organic contaminants in streambed sediments. These relations can be used to assist in the identification of geographic regions of primary concern for contamination of bed sediments by chlorinated organic compounds across the State.

Metal release from contaminated coastal sediments under changing pH conditions: Implications for metal mobilization in acidified oceans.

PubMed

Wang, Zaosheng; Wang, Yushao; Zhao, Peihong; Chen, Liuqin; Yan, Changzhou; Yan, Yijun; Chi, Qiaoqiao

2015-12-30

To investigate the impacts and processes of CO2-induced acidification on metal mobilization, laboratory-scale experiments were performed, simulating the scenarios where carbon dioxide was injected into sediment-seawater layers inside non-pressurized chambers. Coastal sediments were sampled from two sites with different contamination levels and subjected to pre-determined pH conditions. Sediment samples and overlying water were collected for metal analysis after 10-days. The results indicated that CO2-induced ocean acidification would provoke increased metal mobilization causing adverse side-effects on water quality. The mobility of metals from sediment to the overlying seawater was correlated with the reduction in pH. Results of sequential extractions of sediments illustrated that exchangeable metal forms were the dominant source of mobile metals. Collectively, our data revealed that high metal concentrations in overlying seawater released from contaminated sediments under acidic conditions may strengthen the existing contamination gradients in Maluan Bay and represent a potential risk to ecosystem health in coastal environments. Copyright © 2015 Elsevier Ltd. All rights reserved.

Increasing precision of turbidity-based suspended sediment concentration and load estimates.

PubMed

Jastram, John D; Zipper, Carl E; Zelazny, Lucian W; Hyer, Kenneth E

2010-01-01

Turbidity is an effective tool for estimating and monitoring suspended sediments in aquatic systems. Turbidity can be measured in situ remotely and at fine temporal scales as a surrogate for suspended sediment concentration (SSC), providing opportunity for a more complete record of SSC than is possible with physical sampling approaches. However, there is variability in turbidity-based SSC estimates and in sediment loadings calculated from those estimates. This study investigated the potential to improve turbidity-based SSC, and by extension the resulting sediment loading estimates, by incorporating hydrologic variables that can be monitored remotely and continuously (typically 15-min intervals) into the SSC estimation procedure. On the Roanoke River in southwestern Virginia, hydrologic stage, turbidity, and other water-quality parameters were monitored with in situ instrumentation; suspended sediments were sampled manually during elevated turbidity events; samples were analyzed for SSC and physical properties including particle-size distribution and organic C content; and rainfall was quantified by geologic source area. The study identified physical properties of the suspended-sediment samples that contribute to SSC estimation variance and hydrologic variables that explained variability of those physical properties. Results indicated that the inclusion of any of the measured physical properties in turbidity-based SSC estimation models reduces unexplained variance. Further, the use of hydrologic variables to represent these physical properties, along with turbidity, resulted in a model, relying solely on data collected remotely and continuously, that estimated SSC with less variance than a conventional turbidity-based univariate model, allowing a more precise estimate of sediment loading, Modeling results are consistent with known mechanisms governing sediment transport in hydrologic systems.

PCB dechlorination hotspots and reductive dehalogenase genes in sediments from a contaminated wastewater lagoon.

PubMed

Mattes, Timothy E; Ewald, Jessica M; Liang, Yi; Martinez, Andres; Awad, Andrew; Richards, Patrick; Hornbuckle, Keri C; Schnoor, Jerald L

2017-08-12

Polychlorinated biphenyls (PCBs) are a class of persistent organic pollutants that are distributed worldwide. Although industrial PCB production has stopped, legacy contamination can be traced to several different commercial mixtures (e.g., Aroclors in the USA). Despite their persistence, PCBs are subject to naturally occurring biodegradation processes, although the microbes and enzymes involved are poorly understood. The biodegradation potential of PCB-contaminated sediments in a wastewater lagoon located in Virginia (USA) was studied. Total PCB concentrations in sediments ranged from 6.34 to 12,700 mg/kg. PCB congener profiles in sediment sample were similar to Aroclor 1248; however, PCB congener profiles at several locations showed evidence of dechlorination. The sediment microbial community structure varied among samples but was dominated by Proteobacteria and Firmicutes. The relative abundance of putative dechlorinating Chloroflexi (including Dehalococcoides sp.) was 0.01-0.19% among the sediment samples, with Dehalococcoides sp. representing 0.6-14.8% of this group. Other possible PCB dechlorinators present included the Clostridia and the Geobacteraceae. A PCR survey for potential PCB reductive dehalogenase genes (RDases) yielded 11 sequences related to RDase genes in PCB-respiring Dehalococcoides mccartyi strain CG5 and PCB-dechlorinating D. mccartyi strain CBDB1. This is the first study to retrieve potential PCB RDase genes from unenriched PCB-contaminated sediments.

Comparative phosphorus sorption by marine sediments and agricultural soils in a tropical environment.

PubMed

Fox, Robert L; Fares, Ali; Wan, Y; Evensen, Carl I

2006-01-01

The influence of soil phosphorus (P) sources on P sorption characteristics of marine sediments was investigated for Pearl Harbor and off shore Molokai in Hawaii. Estuary sediments were sampled in seven locations; these represented different soils and on-shore activities. The soil samples included nine major soils that contributed sediment to the Harbor and coastal sediments near the island of Molokai. Sediment and soil samples were equilibrated for 6 days in 0.01 M CaCl(2) solution and synthetic seawater containing differing amounts of P. Phosphorus sorption curves were constructed. The equilibrated solution P, with no P added, ranged from 0.01 to 0.2 mg L(-1); P sorption by sediments at standard solution concentration 0.2 mg L(-1), ranged from 0 to 230 mg kg(-1). Sediment P sorption corresponded closely with soil sorption characteristics. Soils contributing sediments to the west reach of Pearl Harbor are highly weathered Oxisols with high standard P sorption values while those in the southeast of the Harbor were Vertisols and Mollisols which sorb little P. The influence of source materials on sediment P sorption was also observed for off-shore sediments near Molokai. Sediments serve as both source and sink for P in Pearl Harbor and in this role can be a stabilizing influence on P concentration in the water column. Phosphorus sorption curves in conjunction with water quality data can help to understand P dynamics between sediments and the water column and help evaluate concerns about P loading to a water body. For Pearl Harbor, solution P in equilibrium with sediments from the Lochs was 0.021 mg L(-1); a value unlikely to produce an algal bloom. (Measured total P in the water columns (mean) was 0.060.).

Suspended sediment transport in an estuarine tidal channel within San Francisco Bay, California

USGS Publications Warehouse

Sternberg, R.W.; Cacchione, D.A.; Drake, D.E.; Kranck, K.

1986-01-01

Size distributions of the suspended sediment samples, estimates of particle settling velocity (??s), friction velocity (U*), and reference concentration (Ca) at z = 20 cm were used in the suspended sediment distribution equations to evaluate their ability to predict the observed suspended sediment profiles. Three suspended sediment particle conditions were evaluated: (1) individual particle sizes in the 4-11 ?? (62.5-0.5 ??m) size range with the reference concentration Ca at z = 20 cm (C??); (2) individual particle sizes in the 4-6 ?? size range, flocs representing the 7-11 ?? size range with the reference concentration Ca at z = 20 cm (Cf); and (3) individual particle sizes in the 4-6 ?? size range, flocs representing the 7-11 ?? size range with the reference concentration predicted as a function of the bed sediment size distribution and the square of the excess shear stress. An analysis was also carried out on the sensitivity of the suspended sediment distribution equation to deviations in the primary variables ??s, U*, and Ca. In addition, computations of mass flux were made in order to show vertical variations in mass flux for varying flow conditions. ?? 1986.

The effects of land use on fluvial sediment chemistry for the conterminous U.S. - Results from the first cycle of the NAWQA Program: Trace and major elements, phosphorus, carbon, and sulfur

USGS Publications Warehouse

Horowitz, A.J.; Stephens, V.C.

2008-01-01

In 1991, the U.S. Geological Survey (USGS) began the first cycle of its National Water Quality Assessment (NAWQA) Program. The Program encompassed 51 river basins that collectively accounted for more than 70% of the total water use (excluding power generation), and 50% of the drinking water supply in the U.S. The basins represented a variety of hydrologic settings, rock types (geology), land-use categories, and population densities. One aspect of the first cycle included bed sediment sampling; sites were chosen to represent baseline and important land-use categories (e.g., agriculture, urban) in each basin. In total, over 1200 bed sediment samples were collected. All samples were size-limited (< 63????m) to facilitate spatial and/or temporal comparisons, and subsequently analyzed for a variety of chemical constituents including major (e.g., Fe, Al,) and trace elements (e.g., Cu, Zn, Cd), nutrients (e.g., P), and carbon. The analyses yielded total (??? 95% of the concentrations present), rather than total-recoverable chemical data. Land-use percentages, upstream underlying geology, and population density were determined for each site and evaluated to asses their relative influence on sediment chemistry. Baseline concentrations for the entire U.S. also were generated from a subset of all the samples, and are based on material collected from low population (??? 27??p km- 2) density, low percent urban (??? 5%), agricultural or undeveloped areas. The NAWQA baseline values are similar to those found in other national and global datasets. Further, it appears that upstream/underlying rock type has only a limited effect (mostly major elements) on sediment chemistry. The only land-use category that appears to substantially affect sediment chemistry is percent urban, and this result is mirrored by population density; in fact, the latter appears more consistent than the former.

Sources and relative reactivities of amino acids, neutral sugars, and lignin in an intermittently anoxic marine environment

NASA Astrophysics Data System (ADS)

Cowie, Gregory L.; Hedges, John I.; Calvert, Stephen E.

1992-05-01

A sediment-trap sample, representing an annual average particle flux at 50 m in Saanich Inlet, British Columbia, was analyzed for its elemental, amino acid, neutral sugar, and lignin composition. Amino acid analyses also were performed on underlying sediments which were analyzed previously for organic carbon, nitrogen, neutral sugars, and lignin. The results uniformly indicate primarily marine organic matter sources for all samples, although relatively higher terrigenous contributions are evident in the sediments. The δ13C values of trap materials also point to primarily autochthonous particle fluxes. Comparison of annual average water-column fluxes to sediment accumulation rates indicates under-sampling of sinking particles due to lateral sediment inputs at depth. The anoxic benthic interface appears to be an important site of diagenesis, and selective removal is observed both at compound-class and molecular levels. Cinnamyl and syringyl phenols are selectively removed relative to vanillyl phenols and loss patterns of the monosaccharides, and to a lesser degree the amino acids, strongly indicate preferential preservation of diatom cell-wall materials. Low flux ratios displayed by the nonprotein amino acids are consistent with their diagenetic origin. Preferential loss of marine organic material is indicated by the calculated δ13C value and biochemical composition of the substrate. Concentrations of all measured organic constituents decreased with depth in the uniformly varved 0-14 cm sediment interval, and suggest in situ degradation. Relative reactivities of the biochemical classes indicate a change in diagenetic substrate from that utilized above and at the benthic interface. With the exception of the amino acids, however, diagenesis is generally less selective in the sediments. The amino acid utilization pattern differs from that observed across the benthic interface, and down-core changes in protein and nonprotein amino acid compositions clearly indicate in situ degradation. The sedimentary degraded fraction also appears to be predominantly marine, but lignin yields and sugar compositions suggest a relative increase in the utilization of vascular plant remains. Protein, polysaccharide, and lignin contributions to total organic carbon decrease from 37% in the sediment-trap sample to 22% at the bottom of the 0-14 cm sediment interval. These biochemicals represent over 40 and 50-60% of the degraded carbon and nitrogen, respectively, and thus are important nutrients for the benthic and water-column communities.

Natural radioactivity of riverbank sediments of the Maritza and Tundja Rivers in Turkey.

PubMed

Aytas, Sule; Yusan, Sabriye; Aslani, Mahmoud A A; Karali, Turgay; Turkozu, D Alkim; Gok, Cem; Erenturk, Sema; Gokce, Melis; Oguz, K Firat

2012-01-01

This article represents the first results of the natural radionuclides in the Maritza and Tundja river sediments, in the vicinity of Edirne city, Turkey. The aim of the article is to describe the natural radioactivity concentrations as a baseline for further studies and to obtain the distribution patterns of radioactivity in trans-boundary river sediments of the Maritza and Tundja, which are shared by Turkey, Bulgaria and Greece. Sediment samples were collected during the period of August 2007-April 2010. The riverbank sediment samples were analyzed firstly for their pH, organic matter content and soil texture. The gross alpha/beta and (238)U, (232)Th and (40)K activity concentrations were then investigated in the collected sediment samples. The mean and standard error of mean values of gross alpha and gross beta activity concentrations were found as 91 ± 11, 410 ± 69 Bq/kg and 86 ± 11, 583 ± 109 Bq/kg for the Maritza and Tundja river sediments, respectively. Moreover, the mean and standard error of mean values of (238)U, (232)Th and (40)K activity concentrations were determined as 219 ± 68, 128 ± 55, 298 ± 13 and as 186 ± 98, 121 ± 68, 222 ± 30 Bq/kg for the Maritza and Tundja River, respectively. Absorbed dose rates (D) and annual effective dose equivalent s have been calculated for each sampling point. The average value of adsorbed dose rate and effective dose equivalent were found as 191 and 169 nGy/h; 2 and 2 mSv/y for the Maritza and the Tundja river sediments, respectively.

Radionuclides in Chesapeake Bay sediments

NASA Technical Reports Server (NTRS)

Cressy, P. J., Jr.

1976-01-01

Natural and manmade gamma-ray emitting radionuclides were measured in Chesapeake Bay sediments taken near the Calvert Cliffs Nuclear Power Plant site. Samples represented several water depths, at six locations, for five dates encompassing a complete seasonal cycle. Radionuclide contents of dry sediments ranged as follows: Tl-208, 40 to 400 pCi/kg; Bi-214, 200 to 800 pCi/kg; K, 0.04 to 2.1 percent; Cs-137 5 to 1900 pCi/kg; Ru106, 40 to 1000 pCikg Co60, 1 to 27 pCi/kg. In general, radionuclide contents were positively correlated with each other and negatively correlated with sediment grain size.

Is there a direct relationship between stress biomarkers in oysters and the amount of metals in the sediments where they inhabit?

PubMed

Rodriguez-Iruretagoiena, A; Rementeria, A; Zaldibar, B; de Vallejuelo, S Fdez-Ortiz; Gredilla, A; Arana, G; de Diego, A

2016-10-15

The effects exerted by metals in oysters are still a matter of debate and require more detailed studies. In this work we have investigated whether the health status of oysters are affected by the amount of metals present in the sediments of their habitat. Sediments and oysters were collected in the tidal part of the estuary of the Oka River (Basque Country), representative of other mesotidal, well mixed and short estuaries of the European Atlantic coast. The concentrations of 14 elements were determined in all the samples. Several biomarkers were also measured in the soft tissues of oysters. According to the concentrations found, the sediments were classified as non-toxic or slightly toxic. In good agreement, the histological alterations observed in oysters were not severe. Interestingly, in those sampling sites where the sediments showed relatively high metal concentrations, the metallic content in oysters was lower, and vice versa. Copyright © 2016 Elsevier Ltd. All rights reserved.

Sediment measurement in estuarine and coastal areas

NASA Technical Reports Server (NTRS)

Shelley, P. E.

1976-01-01

A survey of uses of estuarine and coastal areas is given. Problems associated with these uses are discussed, and data needs for intelligent management of these valuable areas are outlined. Suspended sediment measurements are seen to be one of the greatest needs. To help understand the complexity of the problem, a brief discussion of sediment mechanics is given, including sediment sources, characteristics, and transport. The impact of sediment mechanics on its direct measurement (sampling and analysis) is indicated, along with recommendations for directly obtaining representative data. Indirect measurement of suspended sediment by remote sensors is discussed both theoretically and in the light of some recent experiences. The need for an integrated, multidisciplinary program to solve the problem of quantitatively measuring suspended sediment with remote sensors is stressed, and several important considerations of such a program and benefits to be derived therefrom are briefly addressed.

Occurrence of Organic Compounds and Trace Elements in the Upper Passaic and Elizabeth Rivers and Their Tributaries in New Jersey, July 2003 to February 2004: Phase II of the New Jersey Toxics Reduction Workplan for New York-New Jersey Harbor

USGS Publications Warehouse

Wilson, Timothy P.; Bonin, Jennifer L.

2008-01-01

Samples of surface water and suspended sediment were collected from the Passaic and Elizabeth Rivers and their tributaries in New Jersey from July 2003 to February 2004 to determine the concentrations of selected chlorinated organic and inorganic constituents. This sampling and analysis was conducted as Phase II of the New York-New Jersey Harbor Estuary Workplan?Contaminant Assessment and Reduction Program (CARP), which is overseen by the New Jersey Department of Environmental Protection. Phase II of the New Jersey Workplan was conducted to define upstream tributary and point sources of contaminants in those rivers sampled during Phase I work, with special emphasis on the Passaic and Elizabeth Rivers. Samples were collected from three groups of tributaries: (1) the Second, Third, and Saddle Rivers; (2) the Pompton and upper Passaic Rivers; and (3) the West Branch and main stem of the Elizabeth River. The Second, Third, and Saddle Rivers were sampled near their confluence with the tidal Passaic River, but at locations not affected by tidal flooding. The Pompton and upper Passaic Rivers were sampled immediately upstream from their confluence at Two Bridges, N.J. The West Branch and the main stem of the Elizabeth River were sampled just upstream from their confluence at Hillside, N.J. All tributaries were sampled during low-flow discharge conditions using the protocols and analytical methods for organic constituents used in low-flow sampling in Phase I. Grab samples of streamflow also were collected at each site and were analyzed for trace elements (mercury, methylmercury, cadmium, and lead) and for suspended sediment, particulate organic carbon, and dissolved organic carbon. The measured concentrations and available historical suspended-sediment and stream-discharge data (where available) were used to estimate average annual loads of suspended sediment and organic compounds in these rivers. Total suspended-sediment loads for 1975?2000 were estimated using rating curves developed from historical U.S. Geological Survey (USGS) suspended-sediment and discharge data, where available. Average annual loads of suspended sediment, in millions of kilograms per year (Mkg/yr), were estimated to be 0.190 for the Second River, 0.23 for the Third River, 1.00 for the Saddle River, 1.76 for the Pompton River, and 7.40 for the upper Passaic River. On the basis of the available discharge records, the upper Passaic River was estimated to provide approximately 60 percent of the water and 80 percent of the total suspended-sediment load at the Passaic River head-of-tide, whereas the Pompton River provided roughly 20 percent of the total suspended-sediment load estimated at the head-of-tide. The combined suspended-sediment loads of the upper Passaic and Pompton Rivers (9.2 Mkg/yr), however, represent only 40 percent of the average annual suspended-sediment load estimated for the head-of-tide (23 Mkg/yr) at Little Falls, N.J. The difference between the combined suspended-sediment loads of the tributaries and the estimated load at Little Falls represents either sediment trapped upriver from the dam at Little Falls, additional inputs of suspended sediment downstream from the tributary confluence, or uncertainty in the suspended-sediment and discharge data that were used. The concentrations of total suspended sediment-bound polychlorinated biphenyls (PCBs) in the tributaries to the Passaic River were 194 ng/g (nanograms per gram) in the Second River, 575 ng/g in the Third River, 2,320 ng/g in the Saddle River, 200 ng/g in the Pompton River, and 87 ng/g in the upper Passic River. The dissolved PCB concentrations in the tributaries were 563 pg/L (picograms per liter) in the Second River, 2,510 pg/L in the Third River, 2,270 pg/L in the Saddle River, 887 pg/L in the Pompton River, and 1,000 pg/L in the upper Passaic River. Combined with the sediment loads and discharge, these concentrations resulted in annual loads of suspended sediment-bound PCBs, i

The role of large wood in retaining fine sediment, organic matter and plant propagules in a small, single-thread forest river

NASA Astrophysics Data System (ADS)

Osei, Nana A.; Gurnell, Angela M.; Harvey, Gemma L.

2015-04-01

This paper investigates associations among large wood accumulations, retained sediment, and organic matter and the establishment of a viable propagule bank within a forested reach of a lowland river, the Highland Water, UK. A wood survey within the 2-km study reach, illustrates that the quantity of wood retained within the channel is typical of relatively unmanaged river channels bordered by deciduous woodland and that the wood accumulations (jams) that are present are well developed, typically spanning the river channel and comprised of wood that is well decayed. Sediment samples were obtained in a stratified random design focusing on nine subreaches within which samples were aggregated from five different types of sampling location. Two of these locations were wood-associated (within and on bank faces immediately adjacent to wood jams), and the other three locations represented the broader river environment (gravel bars, bank faces, floodplain). The samples were analysed to establish their calibre, organic, and viable plant propagule content. The gravel bar sampling locations retained significantly coarser sediment containing a lower proportion of organic matter and viable propagules than the other four sampling locations. The two wood-related sampling locations retained sediment of intermediate calibre between the gravel bar and the bank-floodplain samples but they retained significantly more organic matter and viable propagules than were found in the other three sampling locations. In particular, the jam bank samples (areas of sediment accumulation against bank faces adjacent to wood jams) contained the highest number of propagules and the largest number of propagule species. These results suggest that retention of propagules, organic matter and relatively fine sediment in and around wood jams has the potential to support vegetation regeneration, further sediment retention, and as a consequence, landform development within woodland streams, although this process is arrested by grazing at the study site. These results also suggest that self-restoration using wood is a potentially cost-effective and far-reaching river restoration strategy but that its full effects develop gradually and require the establishment of a functioning wood budget coupled with grazing levels that are in balance with vegetation growth.

Improved Flotation Technique for Microscopy of In Situ Soil and Sediment Microorganisms

PubMed Central

Bone, T. L.; Balkwill, D. L.

1986-01-01

An improved flotation method for microscopy of in situ soil and sediment microorganisms was developed. Microbial cells were released into gellike flotation films that were stripped from soil and sediment aggregates as these aggregates were submerged in 0.5% solutions of polyvinylpyrrolidone. The use of polyvinylpyrrolidone solutions instead of water facilitated the release of films from saturated samples such as aquifer sediments as well as from typical surface soils. In situ microbial morphological characteristics could then be surveyed rapidly by light microscopy of films stained with acridine orange. This method effectively determined the ranges of morphological diversity in a variety of sample types. It also detected microcolonies and other spatial relationships among microbial cells. Only a small fraction (3.4 to 10.1%) of the microflora was released into the flotation films, but plating and direct evaluations by microscopy showed that this fraction was representative of the total population. Images PMID:16347005

Northern Victoria Land (western Ross Sea-Antarctica): inner shelf fine sedimentation

NASA Astrophysics Data System (ADS)

Colizza, E.; Finocchiaro, F.; Ivaldi, R.; Pittà, A.; Tolotti, R.; Brambati, A.

2003-04-01

The Holocene sedimentation conditions are represented, in the western Ross Sea, by diatomaceous ooze in the uppermost part of sedimentary sequences, while diamicton deposited during Last Glacial Maximum are the basal unit of most cores. Thick layer (> 2 m) of diatomaceous ooze were sampled in the northern Joides Basin and into Granite Harbour. In Drygalski Ice Tongue area and along the coasts of northern Victoria Land, prevails coarse sedimentation, due to seaward flowing of large outlet glacier that drain the Transantarctic Mountain. During 1998-99 and 2001-02 PNRA antarctic cruises, favourable sea ice conditions, has allowed to sample inner shelf area, both in Wood Bay and south of Drygalski ice tongue (Nordenskjold basin). In both sites fine laminated diatomaceous mud are present. Preliminary seismostratigraphy and sedimentological data are here reported. This is the first note of new sites of fine sedimentation in the Ross Sea inner shelf.

[Spatiotemporal variation characteristics of heavy metals pollution in the water, soil and sediments environment of the Lean River-Poyang Lake Wetland].

PubMed

Jian, Min-Fei; Li, Ling-Yu; Xu, Peng-Fei; Chen, Pu-Qing; Xiong, Jian-Qiu; Zhou, Xue-Ling

2014-05-01

Overlying water, sediments, surface soils in the typical wetland areas of Lean River and Poyang Lake which were rich in non-ferrous metal mineral resources on both sides of the river, were chosen for monitoring heavy metals including copper, lead and cadmium of base flow in average season, flood season, and dry season in 2012. Statistical analysis methods were coupled to characterize the spatiotemporal variation of heavy metals pollution and identify the main sources. The results indicated that the concentrations of copper were the highest in all samples of each sampling sites in the Lean River-Poyang Lake wetland. And the content values of copper, lead and cadmium in different samples of different sampling sites also showed that the content values of copper were higher than those of lead, and the content values of lead were also higher than those of cadmium. The results also showed that the heavy metals pollution of copper, lead and cadmium in flood season was the heaviest whereas the heavy metals pollution in dry season was comparatively light. The results of the contents of the three kinds of heavy metals elements in different sampling sites of the watersheds of lean River showed that the contents of copper in the samples from the upstream sampling sites of Lean River were higher than those of other samples from other sites. And the contents of lead in the samples from the downstream sampling sites of Lean River were higher than those of other samples from other sampling sites. The contents of cadmium in the samples from the midstream sampling sites of Lean River were higher than those of other samples from other sites. The first principal component representing copper pollution explained 36. 99% of the total variance of water quality. The second principal component concerning representing lead pollution explained 30. 12% of the total variance. The correlation analysis results showed that there were significant positive correlations among the contents of copper in sediments and the contents of copper in overlying water. And there was also significant positive correlation between the contents of copper in sediments and the contents of copper in the surface soils. And the correlation analysis showed that there were significant positive correlations among the contents of cadmium in sediments and the contents of cadmium in surface soils. The above results reflected that the copper pollution or cadmium sources of water, soil and sediments were consistent, which were mainly from heavy metal acidic waste of mining emissions. The correlations between other components were not very obvious, which reflected the sources of pollutants were different.

Assessment of 226Ra, 238U, 232Th, 137Cs and 40K activities from the northern coastline of Oman Sea (water and sediments).

PubMed

Darabi-Golestan, F; Hezarkhani, A; Zare, M R

2017-05-15

Water and sediment samples were collected from northern coast of Oman Sea covering from Goatr to Hormoz canyon seaport. Water and sediment quality assessment for naturally or anthropogenic radionuclides at Oman Sea as a main strategic golf for trade and transit, is an important issue. Correspondence analysis (CA) by R-mode analysis represents that sigma(T)-temperature-conductivity-O 2 parameters are well-correlated with 226 Ra, 232 Th and 40 K. Accordingly Q-mode analysis revealed an indicator samples of ST13W for different radionuclides, ST03W for O 2 , and simultaneously ST34W-ST21W-ST08W-ST04W for sigma(T) parameters. The CA results overlapped with factor and cluster analysis results that explained 85.8% of total variance of water samples. Descriptive analysis of sediments indicates more significant variation than water samples. The 232 Th and 226 Ra generally showing that ST13D to ST25D sediments that restricted to Pi Bashk coastline are concentrated from 137 Cs and 40 K. By comparison with reference-values from Iran and other parts of the world, they are acceptable with respect to environmental and radioisotope hazards. Copyright © 2017 Elsevier Ltd. All rights reserved.

Nearshore sediment monitoring for the Stormwater Action Monitoring (SAM) Program, Puget Sound, western Washington

USGS Publications Warehouse

Black, Robert W.; Barnes, Abby; Elliot, Colin; Lanksbury, Jennifer

2018-06-26

Chemicals such as metals and organics (polychlorinated biphenyl [PCBs], polybrominated diphenyl ethers [PBDEs], polycyclic aromatic hydrocarbons [PAHs], and phthalates) continue to enter Puget Sound, western Washington, from point sources (such as industrial and municipal outfalls) and combined sewer outfalls and non-point sources (such as stormwater runoff). Runoff during storm events has been identified as a major source of contamination entering Puget Sound and has been implicated in the degradation of nearshore habitats and biota. Metals, organic chemicals, and other pollutants are known to accumulate in sediments such as those present along the shoreline of Puget Sound. In addition to chemical contaminants, small plastic particles (known as microplastics), found in marine waters of Puget Sound and suspected of being in aquatic sediments, are a potential concern because they can be ingested by animals and are suspected of transporting sorbed chemicals such as PCBs and metals.The Stormwater Work Group of Puget Sound (SWG) (composed of State and municipal stormwater permittees, and other stakeholders) developed a strategy to address sediment conditions in the nearshore environment of Puget Sound. As part of this strategy, the SWG developed a regional stormwater monitoring strategy designed to inform monitoring requirements in National Pollutant Discharge Elimination System (NPDES) stormwater permits issued by the Washington State Department of Ecology (Ecology). The monitoring program is referred to as the Stormwater Action Monitoring (SAM).The overall focus of the work described in this report is to address one of the goals of SAM, which is to characterize the status, spatial extent, and quality of Puget Sound sediment chemicals in the nearshore urban areas. The nearshore urban areas are defined as areas parallel to established Urban Growth Areas (UGAs) using a spatially balanced probabilistic Generalized Random Tessellation Stratified (GRTS) sampling design. One of the benefits of the GRTS sampling design used for this study is that it allows one to efficiently extrapolate from a relatively small number of sampled nearshore sites to the entire nearshore shoreline within the 2011 defined UGA boundaries of Puget Sound. In addition to characterizing nearshore sediment chemical concentrations, this study also characterized the abundance of microplastics in the nearshore sediment.A total of 41 randomly selected sites were sampled throughout Puget Sound in summer and early autumn of 2016. All sampling sites were located at 6 feet below the Mean Lower Low Water line. The top 2–3 centimeters of sediment were collected using a boat-mounted, pre-cleaned stainless-steel box corer. All chemical samples were sieved to 2 millimeters and placed in appropriate containers for chemical analysis for PCBs, PBDEs, PAHs, phthalates, metals, total organic carbon, and grain size. Pre-sieved sediment samples were stored in glass containers for microplastic analysis. Nearshore sediment chemical concentrations were summarized using numerous statistical approaches to examine the minimum, mean, and maximum concentrations for each of the compounds analyzed and to compare the results to criteria and other nearshore and marine sediment studies. The GRTS sampling design also allowed the authors to assess the percentage of the UGA nearshore environment that did not meet established standards or criteria for each chemical analyzed. Additionally, regression and machine learning statistical analyses were used to examine relations between measured chemical concentrations, and land cover and geologic features at multiple scales within the watersheds adjacent to sampling sites. The influence of marine hydrodynamic factors on nearshore sediment chemical concentrations was statistically evaluated with nonparametric methods by assigning each sampling site to one of five nearshore drift cell types based on its location. The Puget Sound shoreline can be divided into segments, referred to as drift cells, based on the movement of sediment along the shore by waves. Each drift cell type has a unique influence on nearshore sediment transport.The nearshore sediment chemical concentrations for organics and metals generally were low, and in most cases less than Washington State criteria. The concentrations of some PAHs were greater than the criteria, but these exceedances were limited to one or two sites. The results of the probabilistic study design determined that, for the PAHs examined, 96 percent or more of the 1,344 km of shoreline represented by this study had concentrations less than any established criteria. For the remaining organics (PCBs and PBDEs), the probabilistic study design indicates that more than 98 percent of shoreline examined had concentrations less than criteria or proposed standards. For the metals, the results of the study indicate that 100 percent of the nearshore sediment had concentrations less than the criteria. The relations between sediment organic and metal concentrations, and adjacent watershed land cover and the particle size of the samples, were determined to be weakly related. Although weakly related, the particle size of the sediment in a sample typically explained more of the variation in metal concentrations than organics. While the measured watershed attributes adjacent to the sampling sites and sediment size of the samples were weakly related to chemical concentrations, they were significantly related to unique drift cells along the shoreline of Puget Sound known as drift cells. Each drift cell represents a long-term directional transport of sediment from its source to its depositional zone. Sediment chemical concentrations were significantly higher in drift cells with limited sediment movement compared to those with higher sediment transport energy.Microplastics in the nearshore sediment ranged from 0.02 to 0.65 pieces per gram of sediment, with a mean of 0.19 pieces per gram of sediment, and were dominated by small fibers (355–1,000 micrometers). Like chemical concentrations, microplastics concentrations in the nearshore sediment were poorly related to watershed land cover. Although not significantly different, microplastics concentrations generally were higher in the low energy drift cells compared to the high energy drift cells.The results of this study provide a statistically valid status assessment of current nearshore sediment chemical conditions throughout Puget Sound in those areas adjacent to defined UGAs. In addition to the study findings of relatively low concentrations of PCBs, PBDEs, PAHs, phthalates, and metals, the study design provides a statistically valid tool for evaluating changes in these compounds over time if future nearshore sediment assessments are done. Furthermore, the assessment of microplastic abundance represents the first study of its kind that can be used as a benchmark for future evaluations. The results of this study will help inform Ecology in the implementation of monitoring requirements as part of its NPDES stormwater permitting process.

Distribution of brominated flame retardants and dechloranes between sediments and benthic fish--A comparison of a freshwater and marine habitat.

PubMed

Sühring, Roxana; Busch, Friederike; Fricke, Nicolai; Kötke, Danijela; Wolschke, Hendrik; Ebinghaus, Ralf

2016-01-15

A total of 53 halogenated flame retardants (HFRs) were analysed in sediments, European eels and dabs from both freshwater and marine sampling stations in the German Bight and the river Elbe. Classic HFRs, such as polybrominated diphenylethers (PBDEs), were the highest concentrated HFRs in eels as well as in most dabs (apart from 1,2,5,6-tetrabromocyclooctane (TBCO)). In sediments, on the other hand, alternate BFRs and especially dechloranes dominated the contamination pattern. Dabs were still found to be statistically representative for the contamination patterns and relative magnitude in sediments from their respective habitats. Contamination patterns in eels seemed to be more driven by the contamination situation in the food chain or historical contamination of their habitat. Unsuspectedly the alternate flame retardant TBCO was found in comparably high concentrations (up to 12 ng g(-1) ww) in dabs from two sampling stations as well as in sediments from these stations (up to 1.2 ng g(-1) dw). It could not be detected in any other analysed fish or sediment samples, indicating a localised contamination source in the area. This study provides information on HFR contamination patterns and behaviour in both marine and freshwater sediments and their potential role as contamination source for benthic fish. Copyright © 2015 Elsevier B.V. All rights reserved.

Hudson River Paleoclimate, Sea Level, and Human Impact: A Record From Piermont Marsh, NY

NASA Technical Reports Server (NTRS)

Kurdyla; Peteet, Dorothy; Liberman, Louisa; Sugar; Wong; Hansen, James E. (Technical Monitor)

2001-01-01

A 13.77 meter sediment core from Piermont Marsh, NY (40 00 N, 73 55W) records the local and regional vegetational and foraminiferal history of the Hudson Estuary. The sediments were sampled every 4 cm, which represents a decadal to centuryscale resolution. Basal sediment dating is in progress, and the 11-m depth represents about 4000 years. Changes in plant macrofossils and charcoal appear to indicate differences in salinIty and drought, suggesting changes in climate. Scirpus, Salicornia, and high levels of charcoal seem to indicate drier/more saline conditions, while lack of these macrofossils and increases in Chara/Nitella, aquatic leaves, and very little charcoal suggests wetter conditions. Other macrofossils include Carex, Juncus, Polygonum, Zanichellia, Ruppia. High resolution AMS dating of plant macrofossils is in progress, and will be compared with changes in Hudson River sediment cores offshore. Foraminiferal assemblages from key intervals of the core will be presented. Human impact in the upper sediments is visible from the influx of grass seeds, primarily Phragmites, and the ragweed pollen rise.

Water quality, organic chemistry of sediment, and biological conditions of streams near an abandoned wood-preserving plant site at Jackson, Tennessee

USGS Publications Warehouse

Bradfield, A.D.; Flexner, N.M.; Webster, D.A.

1993-01-01

An investigation of water quality, organic sediment chemistry, and biological conditions of streams near an abandoned wood-preserving plant site at Jackson, Tennessee, was conducted during December 1990. The study was designed to assess the extent of possible contamination of water and biota in the streams from creosote-related discharge originating at this Superfund site. Central Creek, adjacent to the plant, had degraded water quality and biological conditions. Water samples from the most downstream station on Central Creek contained 30 micrograms per liter of pentachlorophenol, which exceeds the State's criterion maximum concentrations of 9 micrograms per liter for fish and aquatic life. Bottom-sediment samples from stations on Central Creek contained concentrations of acenaphthene, napthalene, and phenanthrene ranging from 1,400 to 2,500 micrograms per kilogram. Chronic or acute toxicity resulted during laboratory experiments using test organisms exposed to creosote-related contaminants. Sediment elutriate samples from Central Creek caused slightly to highly toxic effects on Ceriodaphnia dubia. Pimephales promelas, and Photobacterium phosphoreum. Fish-tissue samples from this station contained concentrations of naphthalene. dibenzofuran, fluorene, and phenanthrene ranging from 1.5 to 3.9 micrograms per kilogram Blue-green algae at this station represented about 79 percent of the organisms counted, whereas diatoms accounted for only 11 percent. Benthic invertebrate and fish samples from Central Creek had low diversity and density. Sediment samples from a station on the South Fork Forked Deer River downstream from its confluence with Central Creek contained concentrations of acenaphthene, anthracene, chrysene, fluoranthene, fluorene, pyrere, and phenanthrene ranging from 2,800 to 69,000 micrograms per kilogram. Sediment elutriate samples using water as elutriate from this station contained concentrations of extractable organic compounds ranging from an estimated 43 to 420 micrograms per liter. Sediment elutriate samples were toxic to Ceriodaphnia dubta, Pimephales promelas, Photobacterium phosphoreum, and Salenastrum capricornulum.

Identification of varying time scales in sediment transport using the Hilbert-Huang Transform method

NASA Astrophysics Data System (ADS)

Kuai, Ken Z.; Tsai, Christina W.

2012-02-01

SummarySediment transport processes vary at a variety of time scales - from seconds, hours, days to months and years. Multiple time scales exist in the system of flow, sediment transport and bed elevation change processes. As such, identification and selection of appropriate time scales for flow and sediment processes can assist in formulating a system of flow and sediment governing equations representative of the dynamic interaction of flow and particles at the desired details. Recognizing the importance of different varying time scales in the fluvial processes of sediment transport, we introduce the Hilbert-Huang Transform method (HHT) to the field of sediment transport for the time scale analysis. The HHT uses the Empirical Mode Decomposition (EMD) method to decompose a time series into a collection of the Intrinsic Mode Functions (IMFs), and uses the Hilbert Spectral Analysis (HSA) to obtain instantaneous frequency data. The EMD extracts the variability of data with different time scales, and improves the analysis of data series. The HSA can display the succession of time varying time scales, which cannot be captured by the often-used Fast Fourier Transform (FFT) method. This study is one of the earlier attempts to introduce the state-of-the-art technique for the multiple time sales analysis of sediment transport processes. Three practical applications of the HHT method for data analysis of both suspended sediment and bedload transport time series are presented. The analysis results show the strong impact of flood waves on the variations of flow and sediment time scales at a large sampling time scale, as well as the impact of flow turbulence on those time scales at a smaller sampling time scale. Our analysis reveals that the existence of multiple time scales in sediment transport processes may be attributed to the fractal nature in sediment transport. It can be demonstrated by the HHT analysis that the bedload motion time scale is better represented by the ratio of the water depth to the settling velocity, h/ w. In the final part, HHT results are compared with an available time scale formula in literature.

Trace metals and persistent organic pollutants in sediments from river-reservoir systems in Democratic Republic of Congo (DRC): Spatial distribution and potential ecotoxicological effects.

PubMed

Mwanamoki, Paola M; Devarajan, Naresh; Thevenon, Florian; Birane, Niane; de Alencastro, Luiz Felippe; Grandjean, Dominique; Mpiana, Pius T; Prabakar, Kandasamy; Mubedi, Josué I; Kabele, Christophe G; Wildi, Walter; Poté, John

2014-09-01

This paper discusses the occurrence and spatial distribution of metals and persistent organic pollutants (POPs: including organochlorine pesticides (OCPs), polychlorinated biphenyls (PCBs), Polybrominated diphenyl ethers (PBDEs), and polycyclic aromatic hydrocarbons (PAHs) in sediments from a river-reservoir system. Surface sediments were sampled from thirteen sites of the Congo River Basin and Lake Ma Vallée, both situated in the vicinity of the capital city Kinshasa (Congo Democratic Republic). Sediment qualities were evaluated using toxicity test based on exposing Ostracods to the sediment samples. The highest metal concentrations were observed in sediments subjected to anthropogenic influences, urban runoff and domestic and industrial wastewaters, discharge into the Congo River basin. Ostracods exposed to the sediments resulted in 100% mortality rates after 6d of incubation, indicating the ultimate toxicity of these sediments as well as potential environmental risks. The POPs and PAHs levels in all sediment samples were low, with maximum concentration found in the sediments (area of pool Malebo): OCP value ranged from 0.02 to 2.50 with ∑OCPs: 3.3μgkg(-1); PCB ranged from 0.07 to 0.99 with Total PCBs (∑7×4.3): 15.31μgkg(-1); PAH value ranged from 0.12 to 9.39 with ∑PAHs: 63.89μgkg(-1). Our results indicate that the deterioration of urban river-reservoir water quality result mainly from urban stormwater runoff, untreated industrial effluents which discharge into the river-reservoirs, human activities and uncontrolled urbanization. This study represents useful tools incorporated to evaluate sediment quality in river-reservoir systems which can be applied to similar aquatic environments. Copyright © 2014 Elsevier Ltd. All rights reserved.

Phenols in hydrothermal petroleums and sediment bitumen from Guaymas Basin, Gulf of California

NASA Technical Reports Server (NTRS)

Simoneit, B. R.; Leif, R. N.; Ishiwatari, R.

1996-01-01

The aliphatic, aromatic and polar (NSO) fractions of seabed petroleums and sediment bitumen extracts from the Guaymas Basin hydrothermal system have been analyzed by gas chromatography and gas chromatography-mass spectrometry (free and silylated). The oils were collected from the interiors and exteriors of high temperature hydrothermal vents and represent hydrothermal pyrolyzates that have migrated to the seafloor by hydrothermal fluid circulation. The downcore sediments are representative of both thermally unaltered and thermally altered sediments. The survey has revealed the presence of oxygenated compounds in samples with a high degree of thermal maturity. Phenols are one class of oxygenated compounds found in these samples. A group of methyl-, dimethyl- and trimethyl-isoprenoidyl phenols (C27-C29) is present in all of the seabed NSO fractions, with the methyl- and dimethyl-isoprenoidyl phenols occurring as major components, and a trimethyl-isoprenoidyl phenol as a minor component. A homologous series of n-alkylphenols (C13-C33) has also been found in the seabed petroleums. These phenols are most likely derived from the hydrothermal alteration of sedimentary organic matter. The n-alkylphenols are probably synthesized under hydrothermal conditions, but the isoprenoidyl phenols are probably hydrothermal alteration products of natural product precursors. The suites of phenols do not appear to be useful tracers of high temperature hydrothermal processes.

Preliminary results of chronostratigraphic field work, OSL-dating and morphogenetic reconstruction of an alluvial apron at Alborz southern foothill, Damghan basin, Iran

NASA Astrophysics Data System (ADS)

Büdel, Christian; Fuchs, Markus; Majid Padashi, Seyed; Baumhauer, Roland

2014-05-01

Here we present preliminary results of a chronostratigraphic study of an alluvial fan in the Damghan Basin, northern Iran. The basin sediments date back to the Mio- and Pliocene and therefore represent the starting point of alluvial fan aggradation. Today, the still active alluvial fans prograde from the Albors Mountain ranges and sit on the older sediment bodies. In this study, our focus is on the late Pleistocene to Holocene alluvial fan sedimentation history. The upper stratigraphy of the alluvial fans and intercalated lake deposits is characterized by six individual layers of gravels and fines, representing six different stratigraphic units. These units are described and classified by detailed geomorphological and stratigraphic mapping. To establish an alluvial fan chronology, six profiles were sampled for OSL dating. As expected, due to the high-energy transport system of alluvial fan aggradation in semi-desert environments, OSL dating of these sediments is challenging due to the problem of insufficient bleaching. Consequently, most of the samples are interpreted as maximum ages. However, the measurements show a consistent internal age structure and the overall OSL-based chronology is in agreement with the age model derived from our geomorphological analysis. As a first interpretation, based on surveyed geomorphological features and chronological analysis, we could identify seven morphodynamic phases, leading to a genetic model of alluvial fan aggradation. The oldest Pleistocene age estimate is derived from a former lake terrace. The following ages represent ongoing lake sediment deposition and the development of a proximal and mid-fan gravel cover. After the youngest lake deposits were accumulated within the Holocene, the lake starts to retreat and small alluvial fans are filling up the former lake bottom. This last sedimentation phase can be divided in at least two sub-phases, probably coupled to a lateral shifting of the active depositional lobe and to the abandonment and shallow incision of mid fan surfaces.

Concentrations of antifouling biocides in sediment and mussel samples collected from Otsuchi bay, Japan.

PubMed

Harino, Hiroya; Yamamoto, Yoshikazu; Eguchi, Sayaka; Kawai, Shini'chiro; Kurokawa, Yuko; Arai, Takaomi; Ohji, Madoka; Okamura, Hideo; Miyazaki, Nobuyuki

2007-02-01

Organotin compounds (OTs) and representative booster biocides were measured in sediment and mussels from Otsuchi Bay, Japan. The mean amounts of tributyltin (TBT) and triphenyltin (TPT) compounds in sediment were 13 microg kg(-1) dry and 3 microg kg(-1) dry, respectively. Representative booster biocides (Sea-Nine 211, Diuron, Dichlofluanid, Irgarol 1501, M1, which is a degradation compound of Irgarol 1051, and Copper pyrithione) were also detected in sediment from Otsuchi Bay. OT concentrations were higher than those of the measured booster biocides. Otsuchi Bay was divided into four parts by cluster analysis based on OT concentrations in sediment sampled from the bay. These areas included the vicinity of a shipyard, a small fishing port, the closed inner area of the bay, and the mouth of the bay. Higher concentrations of TBT and TPT and a higher ratio of TBT to total BTs were observed in the vicinity of the shipyard. A higher concentration of TPT in comparison with TBT was detected in a small fishing port. Furthermore, OT concentrations in the mouth of the bay were higher than those in the closed-off section. OT concentrations in mussels decreased with distance from the shipyard. Otsuchi Bay was then divided into three parts by cluster analysis based on the concentrations of representative booster biocides found in the bay's sediment. These areas included the vicinity of a shipyard, a small fishing port, and other sites. Concentrations of Diuron and Irgarol 1051 in the vicinity of a shipyard and a small fishing port were dramatically high in comparison with the other sites. Copper pyrithione and Dichlofluanid in addition to Diuron and Irgarol 1051 were also detected in the area of a small fishing port. The concentrations of antifouling biocides were highest in the water in front of the shipyard and showed a marked decrease with distance from the shipyard.

Distinct Bacterial Communities in Surficial Seafloor Sediments Following the 2010 Deepwater Horizon Blowout.

PubMed

Yang, Tingting; Speare, Kelly; McKay, Luke; MacGregor, Barbara J; Joye, Samantha B; Teske, Andreas

2016-01-01

A major fraction of the petroleum hydrocarbons discharged during the 2010 Macondo oil spill became associated with and sank to the seafloor as marine snow flocs. This sedimentation pulse induced the development of distinct bacterial communities. Between May 2010 and July 2011, full-length 16S rRNA gene clone libraries demonstrated bacterial community succession in oil-polluted sediment samples near the wellhead area. Libraries from early May 2010, before the sedimentation event, served as the baseline control. Freshly deposited oil-derived marine snow was collected on the surface of sediment cores in September 2010, and was characterized by abundantly detected members of the marine Roseobacter cluster within the Alphaproteobacteria. Samples collected in mid-October 2010 closest to the wellhead contained members of the sulfate-reducing, anaerobic bacterial families Desulfobacteraceae and Desulfobulbaceae within the Deltaproteobacteria, suggesting that the oil-derived sedimentation pulse triggered bacterial oxygen consumption and created patchy anaerobic microniches that favored sulfate-reducing bacteria. Phylotypes of the polycyclic aromatic hydrocarbon-degrading genus Cycloclasticus, previously found both in surface oil slicks and the deep hydrocarbon plume, were also found in oil-derived marine snow flocs sedimenting on the seafloor in September 2010, and in surficial sediments collected in October and November 2010, but not in any of the control samples. Due to the relative recalcitrance and stability of polycyclic aromatic compounds, Cycloclasticus represents the most persistent microbial marker of seafloor hydrocarbon deposition that we could identify in this dataset. The bacterial imprint of the DWH oil spill had diminished in late November 2010, when the bacterial communities in oil-impacted sediment samples collected near the Macondo wellhead began to resemble their pre-spill counterparts and spatial controls. Samples collected in summer of 2011 did not show a consistent bacterial community signature, suggesting that the bacterial community was no longer shaped by the DWH fallout of oil-derived marine snow, but instead by location-specific and seasonal factors.

Distinct Bacterial Communities in Surficial Seafloor Sediments Following the 2010 Deepwater Horizon Blowout

PubMed Central

Yang, Tingting; Speare, Kelly; McKay, Luke; MacGregor, Barbara J.; Joye, Samantha B.; Teske, Andreas

2016-01-01

A major fraction of the petroleum hydrocarbons discharged during the 2010 Macondo oil spill became associated with and sank to the seafloor as marine snow flocs. This sedimentation pulse induced the development of distinct bacterial communities. Between May 2010 and July 2011, full-length 16S rRNA gene clone libraries demonstrated bacterial community succession in oil-polluted sediment samples near the wellhead area. Libraries from early May 2010, before the sedimentation event, served as the baseline control. Freshly deposited oil-derived marine snow was collected on the surface of sediment cores in September 2010, and was characterized by abundantly detected members of the marine Roseobacter cluster within the Alphaproteobacteria. Samples collected in mid-October 2010 closest to the wellhead contained members of the sulfate-reducing, anaerobic bacterial families Desulfobacteraceae and Desulfobulbaceae within the Deltaproteobacteria, suggesting that the oil-derived sedimentation pulse triggered bacterial oxygen consumption and created patchy anaerobic microniches that favored sulfate-reducing bacteria. Phylotypes of the polycyclic aromatic hydrocarbon-degrading genus Cycloclasticus, previously found both in surface oil slicks and the deep hydrocarbon plume, were also found in oil-derived marine snow flocs sedimenting on the seafloor in September 2010, and in surficial sediments collected in October and November 2010, but not in any of the control samples. Due to the relative recalcitrance and stability of polycyclic aromatic compounds, Cycloclasticus represents the most persistent microbial marker of seafloor hydrocarbon deposition that we could identify in this dataset. The bacterial imprint of the DWH oil spill had diminished in late November 2010, when the bacterial communities in oil-impacted sediment samples collected near the Macondo wellhead began to resemble their pre-spill counterparts and spatial controls. Samples collected in summer of 2011 did not show a consistent bacterial community signature, suggesting that the bacterial community was no longer shaped by the DWH fallout of oil-derived marine snow, but instead by location-specific and seasonal factors. PMID:27679609

Sediment redistribution and grainsize effects on 230Th-normalized mass accumulation rates and focusing factors in the Panama Basin

NASA Astrophysics Data System (ADS)

Loveley, Matthew R.; Marcantonio, Franco; Lyle, Mitchell; Ibrahim, Rami; Hertzberg, Jennifer E.; Schmidt, Matthew W.

2017-12-01

Here, we examine how redistribution of differing grain sizes by sediment focusing processes in Panama Basin sediments affects the use of 230Th as a constant-flux proxy. We study representative sediments of Holocene and Last Glacial Maximum (LGM) time slices from four sediment cores from two different localities close to the ridges that bound the Panama Basin. Each locality contains paired sites that are seismically interpreted to have undergone extremes in sediment redistribution, i.e., focused versus winnowed sites. Both Holocene and LGM samples from sites where winnowing has occurred contain significant amounts (up to 50%) of the 230Th within the >63 μm grain size fraction, which makes up 40-70% of the bulk sediment analyzed. For sites where focusing has occurred, Holocene and LGM samples contain the greatest amounts of 230Th (up to 49%) in the finest grain-sized fraction (<4 μm), which makes up 26-40% of the bulk sediment analyzed. There are slight underestimations of 230Th-derived mass accumulation rates (MARs) and overestimations of 230Th-derived focusing factors at focused sites, while the opposite is true for winnowed sites. Corrections made using a model by Kretschmer et al. (2010) suggest a maximum change of about 30% in 230Th-derived MARs and focusing factors at focused sites, except for our most focused site which requires an approximate 70% correction in one sample. Our 230Th-corrected 232Th flux results suggest that the boundary between hemipelagically- and pelagically-derived sediments falls between 350 and 600 km from the continental margin.

No evidence of extraterrestrial noble metal and helium anomalies at Marinoan glacial termination

NASA Astrophysics Data System (ADS)

Peucker-Ehrenbrink, Bernhard; Waters, Christine A.; Kurz, Mark D.; Hoffman, Paul F.

2016-03-01

High concentrations of extraterrestrial iridium have been reported in terminal Sturtian and Marinoan glacial marine sediments and are used to argue for long (likely 3-12 Myr) durations of these Cryogenian glaciations. Reanalysis of the Marinoan sedimentary rocks used in the original study, supplemented by sedimentary rocks from additional terminal Marinoan sections, however, does not confirm the initial report. New platinum group element concentrations, and 187Os/188Os and 3He/4He signatures are consistent with crustal origin and minimal extraterrestrial contributions. The discrepancy is likely caused by different sample masses used in the two studies, with this study being based on much larger samples that better capture the stochastic distribution of extraterrestrial particles in marine sediments. Strong enrichment of redox-sensitive elements, particularly rhenium, up-section in the basal postglacial cap carbonates, may indicate a return to more fully oxygenated seawater in the aftermath of the Marinoan snowball earth. Sections dominated by hydrogenous osmium indicate increasing submarine hydrothermal sources and/or continental inputs that are increasingly dominated by young mantle-derived rocks after deglaciation. Sedimentation rate estimates for the basal cap carbonates yield surprisingly slow rates of a few centimeters per thousand years. This study highlights the importance of using sedimentary rock samples that represent sufficiently large area-time products to properly sample extraterrestrial particles representatively, and demonstrates the value of using multiple tracers of extraterrestrial matter.

Passive sampling methods for contaminated sediments: Risk assessment and management

PubMed Central

Greenberg, Marc S; Chapman, Peter M; Allan, Ian J; Anderson, Kim A; Apitz, Sabine E; Beegan, Chris; Bridges, Todd S; Brown, Steve S; Cargill, John G; McCulloch, Megan C; Menzie, Charles A; Shine, James P; Parkerton, Thomas F

2014-01-01

This paper details how activity-based passive sampling methods (PSMs), which provide information on bioavailability in terms of freely dissolved contaminant concentrations (Cfree), can be used to better inform risk management decision making at multiple points in the process of assessing and managing contaminated sediment sites. PSMs can increase certainty in site investigation and management, because Cfree is a better predictor of bioavailability than total bulk sediment concentration (Ctotal) for 4 key endpoints included in conceptual site models (benthic organism toxicity, bioaccumulation, sediment flux, and water column exposures). The use of passive sampling devices (PSDs) presents challenges with respect to representative sampling for estimating average concentrations and other metrics relevant for exposure and risk assessment. These challenges can be addressed by designing studies that account for sources of variation associated with PSMs and considering appropriate spatial scales to meet study objectives. Possible applications of PSMs include: quantifying spatial and temporal trends in bioavailable contaminants, identifying and evaluating contaminant source contributions, calibrating site-specific models, and, improving weight-of-evidence based decision frameworks. PSM data can be used to assist in delineating sediment management zones based on likelihood of exposure effects, monitor remedy effectiveness, and, evaluate risk reduction after sediment treatment, disposal, or beneficial reuse after management actions. Examples are provided illustrating why PSMs and freely dissolved contaminant concentrations (Cfree) should be incorporated into contaminated sediment investigations and study designs to better focus on and understand contaminant bioavailability, more accurately estimate exposure to sediment-associated contaminants, and better inform risk management decisions. Research and communication needs for encouraging broader use are discussed. Integr Environ Assess Manag 2014;10:224–236. © 2014 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals, Inc. on behalf of SETAC. PMID:24343931

Microbial communities in methane seep sediments along US Atlantic Margin are structured by organic matter and seepage dynamics

NASA Astrophysics Data System (ADS)

Graw, M. F.; Pohlman, J.; Treude, T.; Ruppel, C. D.; Colwell, F. S.

2016-12-01

Methane seeps are dynamic environments on continental margins where subsurface methane reaches the ocean. Microbial communities play a critical role in carbon cycling within seep sediments via organic carbon degradation, methane production, and anaerobic oxidation of methane (AOM), which consumes 20-80% of methane in seep sediments. However, biogeochemical controls on microbial community structure at seeps on a margin-wide scale remain unclear. The passive US Atlantic Margin (USAM) has been identified as a region of active methane seepage. Passive margin seeps have traditionally been understudied relative to seeps on active margins. Passive margins exhibit large cross-margin variability in organic carbon deposition and are anticipated to have divergent seep dynamics from active margins. Thus, the USAM offers a unique opportunity to investigate controls on microbial communities in seep sediments. We undertook analysis of microbial communities inhabiting seep sediments at 6 biogeochemically distinct sites along the USAM. Microbiological samples were co-located with measurements of sediment geochemistry and AOM and sulfate reduction rates. Illumina sequencing of the 16S rRNA gene, using both universal (83 samples) and archaeal-specific (64 samples) primers, and the mcrA gene (18 samples) identified 44 bacterial phyla and 7 archaeal phyla. Seeps in canyons and on open slope, likely representing high and low organic content sediments, hosted distinct communities; the former was dominated by ammonia-oxidizing Marine Group I Thaumarchaeota and the latter by mixotrophic Hadesarchaeota. Seep stability also impacted microbial community structure, and in particular the establishment of an AOM community rather than a Bathyarchaeota-dominated community. These findings contribute to understanding how microbial communities are structured within methane seep sediments and pave the way for investigating broad differences in carbon cycling between seeps on passive and active margins.

Changing sources of polychlorinated dibenzo-p-dioxins and furans in sediments and ecological risk for nekton in the lower Passaic River and Newark Bay, New Jersey, USA.

PubMed

Khairy, Mohammed; Barrett, Kirk; Lohmann, Rainer

2016-03-01

Polychlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/Fs) were measured in sediments (surface and deeper sediments) and porewater of the lower Passaic River and Newark Bay (New Jersey, USA) to apportion their sources and conduct an ecological risk assessment. Positive matrix factorization was applied to identify sources of PCDD/Fs. Five source profiles were extracted from the positive matrix factorization model applied to the sediment samples including chloranil, combustion, polychlorinated biphenyl impurities, mixed urban sources, and the historical contamination from the former Diamond Alkali plant. The ecological risk assessment was estimated using several lines of evidence depending on site-specific data (blue crab and fish samples representing different feeding habits and positions in the trophic wood web of the river). Porewater concentrations gave the best estimates of lipid concentrations especially in the blue crab samples (with an average factor difference of 3.8). Calculated hazard quotients (HQs) for the fish samples and blue crab were >1 based on the no-effect concentration and tissue screening concentration approaches. At the same time, calculated porewater toxic units were >1. Sediment concentrations exceeded the published sediment quality guidelines for the protection of fish and benthic species, indicating the existence of significant risk to the aquatic life in the Passaic River. Accordingly, further actions and control measures are needed to reduce the emission of PCDD/Fs from ongoing sources. © 2015 SETAC.

Method validation and reconnaissance of pharmaceuticals, personal care products, and alkylphenols in surface waters, sediments, and mussels in an urban estuary.

PubMed

Klosterhaus, Susan L; Grace, Richard; Hamilton, M Coreen; Yee, Donald

2013-04-01

Novel methods utilizing liquid chromatography-tandem mass spectrometry and gas chromatography-mass spectrometry were validated for low-level detection of 104 pharmaceuticals and personal care products ingredients (PPCPs) and four alkylphenols (APs) in environmental samples. The methods were applied to surface water, sediment, and mussel tissue samples collected from San Francisco Bay, CA, USA, an urban estuary that receives direct discharge from over forty municipal and industrial wastewater outfalls. Among the target PPCPs, 35% were detected in at least one sample, with 31, 10, and 17 compounds detected in water, sediment, and mussels, respectively. Maximum concentrations were 92 ng/L in water (valsartan), 33 ng/g dry weight (dw) in sediments (triclocarban), and 14 ng/g wet weight (ww) in mussels (N,N-diethyl-m-toluamide). Nonylphenol was detected in water (<2-73 ng/L), sediments (22-86 ng/g dw), and mussels (<0.04-95 ng/g ww), and nonylphenol mono- and diethoxylates were detected in sediments (<1-40 ng/g dw) and mussels (<5-192 ng/g ww). The concentrations of PPCPs and APs detected in the San Francisco Bay samples were generally at least an order of magnitude below concentrations expected to elicit toxic effects in aquatic organisms. This study represents the first reconnaissance of PPCPs in mussels living in an urban estuary and provides the first field-derived bioaccumulation factors (BAFs) for select compounds in aquatic organisms. Copyright © 2013 Elsevier Ltd. All rights reserved.

Cultivation and diversity of fungi buried in the Baltic Sea sediments

NASA Astrophysics Data System (ADS)

Xiao, N.

2015-12-01

@font-face { "ＭＳ 明朝"; }@font-face { "Century"; }@font-face { "Century"; }@font-face { "@ＭＳ 明朝"; }p.MsoNormal, li.MsoNormal, div.MsoNormal { margin: 0mm 0mm 0.0001pt; text-align: justify; font-size: 12pt; ; }.MsoChpDefault { ; }div.WordSection1 { page: WordSection1; } Studies on molecular biological and cultivation have been done for the prokaryotic microbial community in the deep biosphere. Compare to the prokaryotic community, few attempts have been done for eukaryotic microbial community. Here we report the study on fungi buried in deep-subsurface sediments by approaches of both cultivation and molecular diversity survey. Cultivation targeting fungi has been done using a sequential sediment samples obtained from the Baltic Sea, Landsort Deep site during the IODP expedition 347. 6 culture media with different nutrition and salt concentration have been tried for the fungi cultivation. 50 isolates of fungi were obtained from the sediment samples. The surface sediments showed richness of fungi strains but not for the deep sediments. Internal Transcribed Spacer (ITS) regions of RNA genes were amplified and for the identification of the isolates. The isolates were classified to 11 different genera. Pseudeurotium bakeri was the dominant strain throughout the glacial and interglacial sediments. We also found different representative fungal strains from glacial and interglacial sediments, suggesting the cultivated strains are buried from different sources. The survey of fungal diversity was done by sequencing the 18S RNA genes in the total DNA extracted from selected sediment samples. Fungi community showed different cluster in the glacial and interglacial sediments.Our results revealed the presence and activity of fungi in the deep biosphere of the Baltic sea and provided evidence of fungal community response to the climate change.

Sediment Characteristics and Transport in the Kootenai River White Sturgeon Critical Habitat near Bonners Ferry, Idaho

USGS Publications Warehouse

Fosness, Ryan L.; Williams, Marshall L.

2009-01-01

Recovery efforts for the endangered Kootenai River population of white sturgeon require an understanding of the characteristics and transport of suspended and bedload sediment in the critical habitat reach of the river. In 2007 and 2008, the U.S. Geological Survey in cooperation with the Kootenai Tribe of Idaho, conducted suspended- and bedload-sediment sampling in the federally designated critical habitat of the endangered Kootenai River white sturgeon population. Three sediment-sampling sites were selected that represent the hydraulic differences in the critical habitat. Suspended- and bedload-sediment samples along with acoustic Doppler current profiles were collected at these sites during specific river discharges. Samples were analyzed to determine suspended- and bedload-sediment characteristics and transport rates. Sediment transport data were analyzed to provide total loading estimates for suspended and bedload sediment in the critical habitat reach. Total suspended-sediment discharge primarily occurred as fine material that moved through the system in suspension. Total suspended-sediment discharge ranged from about 300 metric tons per day to more than 23,000 metric tons per day. Total suspended sediment remained nearly equal throughout the critical habitat, with the exception of a few cases where mass wasting of the banks may have caused sporadic spikes in total suspended sediment. Bedload-sediment discharge averaged 0-3 percent of the total loading. These bedload discharges ranged from 0 to 271 tons per day. The bedload discharge in the upper part of the critical habitat primarily consisted of fine to coarse gravel. A decrease in river competence in addition to an armored channel may be the cause of this limited bedload discharge. The bedload discharge in the middle part of the white sturgeon critical habitat varied greatly, depending on the extent of the backwater from Kootenay Lake. A large quantity of fine-to-coarse gravel is present in the braided reach, but the duration of transport for these gravels is limited by the encroaching backwater of Kootenay Lake. Bedload discharge in the lower part of the white sturgeon critical habitat primarily consisted of fine to coarse sand due to decreased velocities as a result of the backwater from Kootenay Lake.

Adequacy of laser diffraction for soil particle size analysis

PubMed Central

Fisher, Peter; Aumann, Colin; Chia, Kohleth; O'Halloran, Nick; Chandra, Subhash

2017-01-01

Sedimentation has been a standard methodology for particle size analysis since the early 1900s. In recent years laser diffraction is beginning to replace sedimentation as the prefered technique in some industries, such as marine sediment analysis. However, for the particle size analysis of soils, which have a diverse range of both particle size and shape, laser diffraction still requires evaluation of its reliability. In this study, the sedimentation based sieve plummet balance method and the laser diffraction method were used to measure the particle size distribution of 22 soil samples representing four contrasting Australian Soil Orders. Initially, a precise wet riffling methodology was developed capable of obtaining representative samples within the recommended obscuration range for laser diffraction. It was found that repeatable results were obtained even if measurements were made at the extreme ends of the manufacturer’s recommended obscuration range. Results from statistical analysis suggested that the use of sample pretreatment to remove soil organic carbon (and possible traces of calcium-carbonate content) made minor differences to the laser diffraction particle size distributions compared to no pretreatment. These differences were found to be marginally statistically significant in the Podosol topsoil and Vertosol subsoil. There are well known reasons why sedimentation methods may be considered to ‘overestimate’ plate-like clay particles, while laser diffraction will ‘underestimate’ the proportion of clay particles. In this study we used Lin’s concordance correlation coefficient to determine the equivalence of laser diffraction and sieve plummet balance results. The results suggested that the laser diffraction equivalent thresholds corresponding to the sieve plummet balance cumulative particle sizes of < 2 μm, < 20 μm, and < 200 μm, were < 9 μm, < 26 μm, < 275 μm respectively. The many advantages of laser diffraction for soil particle size analysis, and the empirical results of this study, suggest that deployment of laser diffraction as a standard test procedure can provide reliable results, provided consistent sample preparation is used. PMID:28472043

Transport and Sources of Suspended Sediment in the Mill Creek Watershed, Johnson County, Northeast Kansas, 2006-07

USGS Publications Warehouse

Lee, Casey J.; Rasmussen, Patrick P.; Ziegler, Andrew C.; Fuller, Christopher C.

2009-01-01

The U.S. Geological Survey, in cooperation with the Johnson County Stormwater Management Program, evaluated suspended-sediment transport and sources in the urbanizing, 57.4 mi2 Mill Creek watershed from February 2006 through June 2007. Sediment transport and sources were assessed spatially by continuous monitoring of streamflow and turbidity as well as sampling of suspended sediment at nine sites in the watershed. Within Mill Creek subwatersheds (2.8-16.9 mi2), sediment loads at sites downstream from increased construction activity were substantially larger (per unit area) than those at sites downstream from mature urban areas or less-developed watersheds. Sediment transport downstream from construction sites primarily was limited by transport capacity (streamflow), whereas availability of sediment supplies primarily influenced transport downstream from mature urban areas. Downstream sampling sites typically had smaller sediment loads (per unit area) than headwater sites, likely because of sediment deposition in larger, less sloping stream channels. Among similarly sized storms, those with increased precipitation intensity transported more sediment at eight of the nine monitoring sites. Storms following periods of increased sediment loading transported less sediment at two of the nine monitoring sites. In addition to monitoring performed in the Mill Creek watershed, sediment loads were computed for the four other largest watersheds (48.6-65.7 mi2) in Johnson County (Blue River, Cedar, Indian, and Kill Creeks) during the study period. In contrast with results from smaller watersheds in Mill Creek, sediment load (per unit area) from the most urbanized watershed in Johnson County (Indian Creek) was more than double that of other large watersheds. Potential sources of this sediment include legacy sediment from earlier urban construction, accelerated stream-channel erosion, or erosion from specific construction sites, such as stream-channel disturbance during bridge renovation. The implication of this finding is that sediment yields from larger watersheds may remain elevated after the majority of urban development is complete. Surface soil, channel-bank, suspended-sediment, and streambed-sediment samples were analyzed for grain size, nutrients, trace elements, and radionuclides in the Mill Creek watershed to characterize suspended sediment between surface or channel-bank sources. Although concentrations and activities of cobalt, nitrogen, selenium, total organic carbon, cesium-137, and excess lead-210 had significant differences between surface and channel-bank samples, biases resulting from urban construction, additional sorption of constituents during sediment transport, and inability to accurately represent erosion from rills and gullies precluded accurate characterization of suspended-sediment source.

Analyses of water, bank material, bottom material, and elutriate samples collected near Belzoni, Mississippi (upper Yazoo projects)

USGS Publications Warehouse

Brightbill, David B.; Treadway, Joseph B.

1980-01-01

Four core-material-sampling sites and one bottom-material site were chosen by the U.S. Army Corps of Engineers to represent areas of proposed dredging activity along a 24.9-mile reach of the upper Yazoo River. Five receiving-water sites also were selected to represent the water that will contact the proposed dredged material. Chemical and physical analyses were performed upon core or bottom material and native-water (receiving-water) samples from these sites as well as upon elutriate samples of the mixture of sediment and receiving water. The results of these analyses are presented without interpertation. (USGS)

Subsurface sediment contamination during borehole drilling with an air-actuated down-hole hammer.

PubMed

Malard, Florian; Datry, Thibault; Gibert, Janine

2005-10-01

Drilling methods can severely alter physical, chemical, and biological properties of aquifers, thereby influencing the reliability of water samples collected from groundwater monitoring wells. Because of their fast drilling rate, air-actuated hammers are increasingly used for the installation of groundwater monitoring wells in unconsolidated sediments. However, oil entrained in the air stream to lubricate the hammer-actuating device can contaminate subsurface sediments. Concentrations of total hydrocarbons, heavy metals (Cu, Ni, Cr, Zn, Pb, and Cd), and nutrients (particulate organic carbon, nitrogen, and phosphorus) were measured in continuous sediment cores recovered during the completion of a 26-m deep borehole drilled with a down-hole hammer in glaciofluvial deposits. Total hydrocarbons, Cu, Ni, Cr and particulate organic carbon (POC) were all measured at concentrations far exceeding background levels in most sediment cores. Hydrocarbon concentration averaged 124 +/- 118 mg kg(-1) dry sediment (n = 78 samples) with peaks at depths of 8, 14, and 20 m below the soil surface (maximum concentration: 606 mg kg(-1)). The concentrations of hydrocarbons, Cu, Ni, Cr, and POC were positively correlated and exhibited a highly irregular vertical pattern, that probably reflected variations in air loss within glaciofluvial deposits during drilling. Because the penetration of contaminated air into the formation is unpreventable, the representativeness of groundwater samples collected may be questioned. It is concluded that air percussion drilling has strong limitations for well installation in groundwater quality monitoring surveys.

Boron in Pariette Wetland Sediments, Aquatic Vegetation & Benthic Organisms

NASA Astrophysics Data System (ADS)

Vasudeva, P.; Jones, C. P.; Powelson, D.; Jacobson, A. R.

2015-12-01

The Pariette Wetlands are comprised of 20 ponds located in Utah's Uintah Basin. Boron concentration in the Pariette Wetlands have been observed to exceed the total maximum daily limit of 750 µg L-1. Considering water flow in and out of the wetlands, boron is accumulating within the wetlands where it is sorbed to sediments and bioconcentrated by wetland plant and macro invertebrates. Since boron is an avian teratogen, an estimate of boron ingestion exposure is warranted. Samples from 3 of the 23 Pariette Wetland ponds with one pond near the inlet, one near the outlet, and one in the middle were collected. Five sampling points were designated along a 100 m transect of each pond. At each sampling point duplicate (or triplicate) samples of water, sediments, benthic organisms and wetland vegetation were collected. The sediments were collected with a KB-corer and divided at depths of 0-2 cm, 2-7 cm, and 7+ cm from the sediment surface. Sample splits were sent to the USU Bug lab for identification of invertebrate species. Whenever this transect was not intercepting vegetation, 2-3 additional sample sites were identified at the pond within stands of representative vegetation where bird nests are located. The plant parts used for boron analyses will include seeds, shoot and roots of vascular plants, as well as algae or duckweeds skimmed from the surface. Samples were processed within 2 days of collection. Water samples filtered through a 0.45 μ membrane filter were analyzed for DOC, pH and ECe. The dried and washed vegetation samples were ground and stored. The benthic organisms and macro invertebrates were netted at the water surface. The dried samples were weighed, ground and stored. Samples were weighed, oven dried and reweighed. For plant and macro-invertebrate samples, a nitric and hydrogen peroxide digestion procedure is used to dissolve environmentally available elements. The Hot Water extraction and DTPA-Sorbitol extraction were compared to estimate wetland plant available boron in the sediments. Boron in water, soil/sediment extracts and digested plant materials was analyzed by Azomethine-H colorimetric method. Additional Sample Characterization Analyses were conducted to interpret results and explain differences in the fate of boron among the sample sites.

Analytical data from phases I and II of the Willamette River basin water quality study, Oregon

USGS Publications Warehouse

Harrison, Howard E.; Anderson, Chauncey W.; Rinella, Frank A.; Gasser, Timothy M.; Pogue, Ted R.

1995-01-01

The data were collected at 50 sites, representing runoff from agricultural, forested, and urbanized subbasins. In Phase I, water samples were collected during high and low flows in 1992 and 1993 to represent a wide range of hydrologic conditions. Bed-sediment samples were collected during low flows in 1993. In Phase II, water samples were collected in the spring of 1994 after the first high-flow event following the application of agricultural fertilizers and pesticides and in the fall during the first high-flow events following the conclusion of the agricultural season.

Sediment source fingerprinting to quantify fine sediment sources in forested catchments, Chile.

NASA Astrophysics Data System (ADS)

Schuller, P.; Walling, D. E.; Iroume, A.; Castillo, A.; Quilodran, C.

2012-04-01

A study to improve the understanding of the primary sediment sources and transfer pathways in catchments disturbed following forest plantation harvesting is being undertaken in South-Central Chile. The study focuses on two sets of paired experimental catchments (treatment and control), located about 400 km apart, with similar soil type but contrasting mean annual rainfall: Nacimiento (1,200 mm year-1) and Los Ulmos (2,500 mm year-1). Sediment source fingerprinting techniques are being used to document the primary fine sediment sources. In each catchment, three potential sediment sources were defined: clearcut slopes (Z1), forest roads (Z2) and the stream channel (Z3). In each catchment, multiple representative composite samples of the different potential source materials were collected before harvest operations from the upper 1 cm layer in Z1, Z2, and from the channel bank and bed for Z3. A time-integrating trap sampler installed in the discharge monitoring station constructed at the outlet of each catchment has been used to collect samples of the suspended sediment and these have been supplemented by sediment collected from the weir pools. Total suspended sediment load is been quantified in the monitoring stations using discharge records and integrated water sampling. Caesium-137 (137Cs), excess lead-210 (210Pbex) and other sediment properties are being used as fingerprints. After air-drying, oven-drying at 40°C and disaggregation, both the source material samples and the sediment samples collected in the discharge monitoring stations were sieved through a 63-μm sieve and the <63-μm fractions were used for subsequent analyses. For radionuclide assay, the samples were sealed in Petri dishes and after 4 weeks the mass activity density (activity concentration) of 137Cs and 210Pbex was determined by gamma analysis, using an ORTEC extended range Ge detector of 53% relative efficiency. The 137Cs and 210Pbex activity and organic carbon (Corg) concentration associated with potential source materials and the target sediment show that the two radionuclides used in combination with the Corg property provide effective source fingerprints. Additional work using a mixing model taking account of particle size effects is required to establish the relative contributions of the three sources to the fine sediment loads of the study catchments. This research is supported by the Chilean Government through FONDECYT Project 1090574 and by the IAEA through CRP D1.20.11 (Contract CHI-15531 and Technical Contract 15478) and the RLA 05/051 Project.

A novel method for the rapid determination of polyethoxylated tallow amine surfactants in water and sediment using large volume injection with high performance liquid chromatography and tandem mass spectrometry.

PubMed

Ross, Andrew R S; Liao, Xiangjun

2015-08-19

Polyethoxylated tallow amine (POEA) surfactants have been used in many glyphosate-based herbicide formulations for agricultural, industrial and residential weed control. The potential for release of these compounds into the environment is of increasing concern due to their toxicity towards aquatic organisms. Current methods for analysis of POEA surfactants require significant time and effort to achieve limits of quantification that are often higher than the concentrations at which biological effects have been observed (as low as 2 ng mL(-1)). We have developed a rapid and robust method for quantifying the POEA surfactant mixture MON 0818 at biologically relevant concentrations in fresh water, sea water and lake sediment using reversed phase high-performance liquid chromatography and electrospray ionization-tandem mass spectrometry. Water samples preserved by 1:1 v/v dilution with methanol are analyzed directly following centrifugation. Sediment samples undergo accelerated solvent extraction in aqueous methanol prior to analysis. Large volume (100 μL) sample injection and multiple reaction monitoring of a subset of the most abundant POEA homologs provide limits of quantification of 0.5 and 2.9 ng mL(-1) for MON 0818 in fresh water and sea water, respectively, and 2.5 ng g(-1) for total MON 0818 in lake sediment. Average recoveries of 93 and 75% were achieved for samples of water and sediment, respectively spiked with known amounts of MON 0818. Precision and accuracy for the analysis of water and sediment samples were within 10 and 16%, respectively based upon replicate analyses of calibration standards and representative samples. Results demonstrate the utility of the method for quantifying undegraded MON 0818 in water and sediment, although a more comprehensive method may be needed to identify and determine other POEA mixtures and degradation profiles that might occur in the environment. Crown Copyright © 2015. Published by Elsevier B.V. All rights reserved.

Alternative assessment of nano-TiO2 sedimentation under different conditions based on sedimentation efficiency at quasi-stable state

NASA Astrophysics Data System (ADS)

He, Guang'an; Chen, Rui; Lu, Shushen; Jiang, Chengchun; Liu, Hong; Wang, Chuan

2015-11-01

The predictable significant increase in manufacture and use of engineered nanoparticles (ENPs) will cause their inevitable release into environment, and the potential harmful effects of ENPs have been confirmed. As representative ENPs, sedimentation behavior of nano-titanium dioxide (n-TiO2) should be better understood to control its environmental risk. In this study, an experimental methodology was established to set the sampling area and sampling time of n-TiO2 sedimentation. In addition, we defined a quasi-stable state and a precise index, i.e., sedimentation efficiency (SE) at this state, to describe the n-TiO2 sedimentation behavior. Both alternative concentration determination and conventional size measurement were applied to evaluate the sedimentation behavior of n-TiO2 with fulvic acid. Results showed that the sedimentation behavior described by SE was more precise and in disagreement with those predicted by particle size. Moreover, sedimentation experiments with salicylic acid (SA), under an electric field and different water temperatures or with sulfosalicylic acid under light irradiation were also performed. When the total organic carbon concentration of SA, the voltage of working electrodes, and water temperature increased, or the wavelength of light source decreased, the SE of n-TiO2 increased and n-TiO2 showed a tendency to settle in water. These findings might be important for deepening the understanding of n-TiO2 environmental behavior and exploring sedimentation behavior of other ENPs.

The susceptibility of large river basins to orogenic and climatic drivers

NASA Astrophysics Data System (ADS)

Haedke, Hanna; Wittmann, Hella; von Blanckenburg, Friedhelm

2017-04-01

Large rivers are known to buffer pulses in sediment production driven by changes in climate as sediment is transported through lowlands. Our new dataset of in situ cosmogenic nuclide concentration and chemical composition of 62 sandy bedload samples from the world largest rivers integrates over 25% of Earth's terrestrial surface, distributed over a variety of climatic zones across all continents, and represents the millennial-scale denudation rate of the sediment's source area. We can show that these denudation rates do not respond to climatic forcing, but faithfully record orogenic forcing, when analyzed with respective variables representing orogeny (strain rate, relief, bouguer anomaly, free-air anomaly), and climate (runoff, temperature, precipitation) and basin properties (floodplain response time, drainage area). In contrast to this orogenic forcing of denudation rates, elemental bedload chemistry from the fine-grained portion of the same samples correlates with climate-related variables (precipitation, runoff) and floodplain response times. It is also well-known from previous compilations of river-gauged sediment loads that the short-term basin-integrated sediment export is also climatically controlled. The chemical composition of detrital sediment shows a climate control that can originate in the rivers source area, but this signal is likely overprinted during transfer through the lowlands because we also find correlation with floodplain response times. At the same time, cosmogenic nuclides robustly preserve the orogenic forcing of the source area denudation signal through of the floodplain buffer. Conversely, previous global compilations of cosmogenic nuclides in small river basins show the preservation of climate drivers in their analysis, but these are buffered in large lowland rivers. Hence, we can confirm the assumption that cosmogenic nuclides in large rivers are poorly susceptible to climate changes, but are at the same time highly suited to detect changes in orogenic forcing in their paleo sedimentary records.

A New Sensitive GC-MS-based Method for Analysis of Dipicolinic Acid and Quantifying Bacterial Endospores in Deep Marine Subsurface Sediment

NASA Astrophysics Data System (ADS)

Fang, J.

2015-12-01

Marine sediments cover more than two-thirds of the Earth's surface and represent a major part of the deep biosphere. Microbial cells and microbial activity appear to be widespread in these sediments. Recently, we reported the isolation of gram-positive anaerobic spore-forming piezophilic bacteria and detection of bacterial endospores in marine subsurface sediment from the Shimokita coalbed, Japan. However, the modern molecular microbiological methods (e.g., DNA-based microbial detection techniques) cannot detect bacterial endospore, because endospores are impermeable and are not stained by fluorescence DNA dyes or by ribosomal RNA staining techniques such as catalysed reporter deposition fluorescence in situ hybridization. Thus, the total microbial cell abundance in the deep biosphere may has been globally underestimated. This emphasizes the need for a new cultivation independent approach for the quantification of bacterial endospores in the deep subsurface. Dipicolinic acid (DPA, pyridine-2,6-dicarboxylic acid) is a universal and specific component of bacterial endospores, representing 5-15wt% of the dry spore, and therefore is a useful indicator and quantifier of bacterial endospores and permits to estimate total spore numbers in the subsurface biosphere. We developed a sensitive analytical method to quantify DPA content in environmental samples using gas chromatography-mass spectrometry. The method is sensitive and more convenient in use than other traditional methods. We applied this method to analyzing sediment samples from the South China Sea (obtained from IODP Exp. 349) to determine the abundance of spore-forming bacteria in the deep marine subsurface sediment. Our results suggest that gram-positive, endospore-forming bacteria may be the "unseen majority" in the deep biosphere.

Bacterial diversity and bioprospecting for cold-active enzymes from culturable bacteria associated with sediment from a melt water stream of Midtre Lovenbreen glacier, an Arctic glacier.

PubMed

Vardhan Reddy, Puram Vishnu; Shiva Nageswara Rao, Singireesu Soma; Pratibha, Mambatta Shankaranarayanan; Sailaja, Buddhi; Kavya, Bakka; Manorama, Ravoori Ruth; Singh, Shiv Mohan; Radha Srinivas, Tanuku Naga; Shivaji, Sisinthy

2009-10-01

Culturable bacterial diversity of Midtre Lovenbreen glacier, an Arctic glacier, was studied using 12 sediment samples collected from different points, along a transect, from the snout of Midtre Lovenbreen glacier up to the convergence point of the melt water stream with the sea. Bacterial abundance appeared to be closer to the convergence point of the glacial melt water stream with the sea than at the snout of the glacier. A total of 117 bacterial strains were isolated from the sediment samples. Based on 16S rRNA gene sequence analyses, the isolates (n=117) could be categorised in to 32 groups, with each group representing a different taxa belonging to 4 phyla (Actinobacteria, Bacilli, Flavobacteria and Proteobacteria). Representatives of the 32 groups varied in their growth temperature range (4-37 degrees C), in their tolerance to NaCl (0.1-1M NaCl) and in the growth pH range (2-13). Only 14 of 32 representative strains exhibited amylase, lipase and (or) protease activity and only one isolate (AsdM4-6) showed all three enzyme activities at 5 and 20 degrees C respectively. More than half of the isolates were pigmented. Fatty acid profile studies indicated that short-chain fatty acids, unsaturated fatty acids, branched fatty acids, cyclic and cis fatty acids are predominant in the psychrophilic bacteria.

Particle size and chemical control of heavy metals in bed sediment from the Rouge River, southeast Michigan

DOE Office of Scientific and Technical Information (OSTI.GOV)

Murray, K.S.; Cauvet, D.; Lybeer, M.

1999-04-01

Anthropogenic activities related to 100 years of industrialization in the metropolitan Detroit area have significantly enriched the bed sediment of the lower reaches of the Rouge River in Cr, Cu, Fe, Ni, Pb, and Zn. These enriched elements, which may represent a threat to biota, are predominantly present in sequentially extracted reducible and oxidizable chemical phases with small contributions from residual phases. In size-fractionated samples trace metal concentrations generally increase with decreasing particle size, with the greatest contribution to this increase from the oxidizable phase. Experimental results obtained on replicate samples of river sediment demonstrate that the accuracy of themore » sequential extraction procedure, evaluated by comparing the sums of the three individual fractions, is generally better than 10%. Oxidizable and reducible phases therefore constitute important sources of potentially available heavy metals that need to be explicitly considered when evaluating sediment and water quality impacts on biota.« less

Total Reducing Capacity in Aquifer Minerals and Sediments: Quantifying the Potential to Attenuate Cr(VI) in Groundwater

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sisman, S. Lara

2015-07-20

Hexavalent chromium, Cr(VI), is present in the environment as a byproduct of industrial processes. Due to its mobility and toxicity, it is crucial to attenuate or remove Cr(VI) from the environment. The objective of this investigation was to quantify potential natural attenuation, or reduction capacity, of reactive minerals and aquifer sediments. Samples of reduced-iron containing minerals such as ilmenite, as well as Puye Formation sediments representing a contaminated aquifer in New Mexico, were reacted with chromate. The change in Cr(VI) during the reaction was used to calculate reduction capacity. This study found that minerals that contain reduced iron, such asmore » ilmenite, have high reducing capacities. The data indicated that sample history may impact reduction capacity tests due to surface passivation. Further, this investigation identified areas for future research including: a) refining the relationships between iron content, magnetic susceptibility and reduction capacity, and b) long term kinetic testing using fresh aquifer sediments.« less

Microbial colonization and degradation of polyethylene and biodegradable plastic bags in temperate fine-grained organic-rich marine sediments.

PubMed

Nauendorf, Alice; Krause, Stefan; Bigalke, Nikolaus K; Gorb, Elena V; Gorb, Stanislav N; Haeckel, Matthias; Wahl, Martin; Treude, Tina

2016-02-15

To date, the longevity of plastic litter at the sea floor is poorly constrained. The present study compares colonization and biodegradation of plastic bags by aerobic and anaerobic benthic microbes in temperate fine-grained organic-rich marine sediments. Samples of polyethylene and biodegradable plastic carrier bags were incubated in natural oxic and anoxic sediments from Eckernförde Bay (Western Baltic Sea) for 98 days. Analyses included (1) microbial colonization rates on the bags, (2) examination of the surface structure, wettability, and chemistry, and (3) mass loss of the samples during incubation. On average, biodegradable plastic bags were colonized five times higher by aerobic and eight times higher by anaerobic microbes than polyethylene bags. Both types of bags showed no sign of biodegradation during this study. Therefore, marine sediment in temperate coastal zones may represent a long-term sink for plastic litter and also supposedly compostable material. Copyright © 2016 Elsevier Ltd. All rights reserved.

Application of parasound data for sediment study on methane seep site at Simeulue basin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wiguna, Taufan, E-mail: taufan.wiguna@bppt.go.id; Ardhyastuti, Sri

2015-09-30

The Parasound data presents sea depth and sub-bottom profiler. In terms of geological terminology, parasound data represents significant recent surface sedimentary structures that valuable for the selection of subsequent sampling site such as sampling at methane seep site. Therefore, Parasound is used to detailing methane seep at surface sediment following seismic data interpretation. In this study, parasound is used to focus observe area especially for sediment study on methane seep site. The Parasound systems works both as narrow beam sounder use high frequency and as sediment echosounder use low frequency. Parasound acquisition applies parametric effect. It produces additional frequency bymore » nonlinear acoustic interaction of finite amplitude waves. Parasound transducers have 128 elements on 1 m2 and need transmission power up to 70 kW. The results of this study are discovered large seep carbonate with porous surface which means there are gas expulsions passing through that rock.« less

Open-water and under-ice seasonal variations in trace element content and physicochemical associations in fluvial bed sediment.

PubMed

Doig, Lorne E; Carr, Meghan K; Meissner, Anna G N; Jardine, Tim D; Jones, Paul D; Bharadwaj, Lalita; Lindenschmidt, Karl-Erich

2017-11-01

Across the circumpolar world, intensive anthropogenic activities in the southern reaches of many large, northward-flowing rivers can cause sediment contamination in the downstream depositional environment. The influence of ice cover on concentrations of inorganic contaminants in bed sediment (i.e., sediment quality) is unknown in these rivers, where winter is the dominant season. A geomorphic response unit approach was used to select hydraulically diverse sampling sites across a northern test-case system, the Slave River and delta (Northwest Territories, Canada). Surface sediment samples (top 1 cm) were collected from 6 predefined geomorphic response units (12 sites) to assess the relationships between bed sediment physicochemistry (particle size distribution and total organic carbon content) and trace element content (mercury and 18 other trace elements) during open-water conditions. A subset of sites was resampled under-ice to assess the influence of season on these relationships and on total trace element content. Concentrations of the majority of trace elements were strongly correlated with percent fines and proxies for grain size (aluminum and iron), with similar trace element grain size/grain size proxy relationships between seasons. However, finer materials were deposited under ice with associated increases in sediment total organic carbon content and the concentrations of most trace elements investigated. The geomorphic response unit approach was effective at identifying diverse hydrological environments for sampling prior to field operations. Our data demonstrate the need for under-ice sampling to confirm year-round consistency in trace element-geochemical relationships in fluvial systems and to define the upper extremes of these relationships. Whether contaminated or not, under-ice bed sediment can represent a "worst-case" scenario in terms of trace element concentrations and exposure for sediment-associated organisms in northern fluvial systems. Environ Toxicol Chem 2017;36:2916-2924. © 2017 SETAC. © 2017 SETAC.

A cell extraction method for oily sediments

NASA Astrophysics Data System (ADS)

Lappé, M.; Kallmeyer, J.

2012-04-01

Hydrocarbons can be found in many different habitats and represent an important carbon source for microbes. As fossil fuels, they are an important economical resource and, through natural seepage or accidental release, they can be major pollutants. Oil sands from Alberta, Canada, and samples from the seafloor of the Gulf of Mexico represent typical examples of either natural or anthropogenically affected oily sediments. DNA-specific stains and molecular probes bind to hydrocarbons, causing massive background fluorescence and thereby massively hampering cell enumeration. The cell extraction procedure of Kallmeyer et al. (2008) separates the cells from the sediment matrix, producing a sediment free cell extract that can then be used for subsequent staining and cell enumeration under a fluorescence microscope. In principle, this technique can also be used to separate cells from oily sediments, but it was not originally optimized for this application and does not provide satisfactory results. Here we present a modified extraction method in which the hydrocarbons are removed prior to cell extraction by a solvent treatment. Due to the reduced background fluorescence the microscopic image becomes clearer, making cell identification and enumeration much easier. Consequently, the resulting cell counts from oily samples treated according to our new protocol were significantly higher than those treated according to Kallmeyer et al. (2008). We tested different amounts of a variety of solvents for their ability to remove hydrocarbons and found that n-hexane and - in samples containing more biodegraded oils - methanol, delivered the best results. Because solvents also tend to lyse cells, it was important to find the optimum solvent to sample ratio, at which the positive effect of hydrocarbon extraction overcomes the negative effect of cell lysis. A volumetric ratio of 1:2 to 1:5 between a formalin-fixed sediment slurry and solvent delivered highest cell counts. Extraction efficiency was around 30 to 50% and was checked on both oily samples spiked with known amounts of E.coli cells and oil-free samples amended with non-biodegraded and biodegraded oil. The method provided reproducible results on samples containing very different kinds of oils with regard to their degree of biodegradation. For strongly biodegraded oils, like those from the Alberta oil sands, methanol turned out to be the most appropriate solvent. For less biodegraded oils, like those from sediments from the Gulf of Mexico, n-hexane delivered best results. The relative amount of polar groups increases with an increasing level of biodegradation. Therefore polar solvents like methanol are better suited to dissolve biodegraded oils than less polar solvents like n-hexane. Our new method only provides a minimum estimate of cell abundance, as some cells are either lysed by the solvent treatment or remain attached to mineral grains and therefore do not end up in the cell extract but remain in the sediment pellet which will not be used for further microbiological analysis.

Changes in active bacterial communities before and after dredging of highly polluted Baltic Sea sediments.

PubMed

Edlund, Anna; Jansson, Janet K

2006-10-01

Bacteria residing in sediments have key functions in the marine food web. However, it has been difficult to correlate the identity and activity of bacteria in sediments due to lack of appropriate methods beyond cultivation-based techniques. Our aim was to use a combination of molecular approaches, bromodeoxyuridine incorporation and immunocapture, terminal restriction fragment length polymorphism, and cloning and sequencing of 16S rRNA genes to assess the composition of growing bacteria in Baltic Sea sediments. The study site was a highly polluted area off the Swedish coast. The sediments were sampled in two consecutive years, before and after remediation, by dredging of the top sediments. Levels of polyaromatic hydrocarbons (PAHs), mercury, and polychlorinated biphenyls were dramatically reduced as a result of the cleanup project. The compositions of growing members of the communities were significantly different at the two sampling periods. In particular, members from the class Deltaproteobacteria and genus Spirochaeta were more dominant before dredging, but members of the classes Gammaproteobacteria and the Flavobacteria represented the most dominant growing populations after dredging. We also cultivated isolates from the polluted sediments that could transform the model PAH compound, phenanthrene. Some of these isolates were confirmed as dominant growing populations by the molecular methods as well. This suite of methods enabled us to link the identity and activity of the members of the sediment communities.

Analysis of pesticides in surface water and sediment from Yolo Bypass, California, 2004-2005

USGS Publications Warehouse

Smalling, Kelly L.; Orlando, James L.; Kuivila, Kathryn

2005-01-01

Inputs to the Yolo Bypass are potential sources of pesticides that could impact critical life stages of native fish. To assess the direct inputs during inundation, pesticide concentrations were analyzed in water, in suspended and bed-sediment samples collected from six source watersheds to the Yolo Bypass, and from three sites within the Bypass in 2004 and 2005. Water samples were collected in February 2004 from the six input sites to the Bypass during the first flood event of the year representing pesticide inputs during high-flow events. Samples were also collected along a transect across the Bypass in early March 2004 and from three sites within the Bypass in the spring of 2004 under low-flow conditions. Low-flow data were used to understand potential pesticide contamination and its effects on native fish if water from these areas were used to flood the Bypass in dry years. To assess loads of pesticides to the Bypass associated with suspended sediments, large-volume water samples were collected during high flows in 2004 and 2005 from three sites, whereas bed sediments were collected from six sites in the fall of 2004 during the dry season. Thirteen current-use pesticides were detected in surface water samples collected during the study. The highest pesticide concentrations detected at the input sites to the Bypass corresponded to the first high-flow event of the year. The highest pesticide concentrations at the two sites sampled within the Bypass during the early spring were detected in mid-April following a major flood event as the water began to subside. The pesticides detected and their concentrations in the surface waters varied by site; however, hexazinone and simazine were detected at all sites and at some of the highest concentrations. Thirteen current-use pesticides and three organochlorine insecticides were detected in bed and suspended sediments collected in 2004 and 2005. The pesticides detected and their concentrations varied by site and sediment sample type. Trifluralin, p,p'-DDE, and p,p'-DDT were highest in the bed sediments, whereas oxyfluorfen and thiobencarb were highest in the suspended sediments. With the exception of the three organochlorine insecticides, suspended sediments had higher pesticide concentrations compared with bed sediments, indicating the potential for pesticide transport throughout the Bypass, especially during high-flow events. Understanding the distribution of pesticides between the water and sediment is needed to assess fate and transport within the Bypass and to evaluate the potential effects on native fish.

Deep Subsurface Life from North Pond: Enrichment, Isolation, Characterization and Genomes of Heterotrophic Bacteria

PubMed Central

Russell, Joseph A.; León-Zayas, Rosa; Wrighton, Kelly; Biddle, Jennifer F.

2016-01-01

Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic water-column west of the Mid-Atlantic Ridge at 22°N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP Hole U1382B at 4 and 68 m below seafloor (mbsf). These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sediment column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, initial characterization and genomes of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2%) relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. The cultures from this study represent members of abundant phyla, as determined by amplicon sequencing of environmental DNA extracts, and allow for further studies into geochemical factors impacting life in the deep subsurface. PMID:27242705

Sediment Characterization in St. Alban's Bay, VT

NASA Astrophysics Data System (ADS)

Nethercutt, S.; Manley, T.; Manley, P.

2017-12-01

St. Alban's Bay within Lake Champlain is plagued with harmful algal blooms. With future intensification due to climate change, a multidisciplinary program (BREE-Basin Resilience to Extreme Events) was initiated in 2016. In order to assess the mobilization of harmful nutrients from sediment resuspension events and riverine input, 74 sediment samples were collected in a grid fashion throughout St. Alban's Bay. Sediments were deflocculated and analyzed using a LA920 Horiba laser scattering particle size distribution analyzer to define the frequency of sediment sizes from clay to sand. Gridded surfaces of mean sortable silt percentage, silt percentage, sand percentage, and clay percentage were used to represent the sediment distribution of the region. A plot of diameter versus frequency showed the bimodal nature of some of the sediments, with one peak at about 10 microns diameter (silt) and the second at about 525 microns diameter (sand). The data showed an extremely low percentage of clay relative to that of sand and silt. The highest frequencies of sortable silt, which represents the most easily mobilized particle size, are found in the deepest areas of the bay, suggesting that these regions are where dominant bottom flow occurs. The high occurrence of sortable silt in the St. Alban's Bay does suggest that sediment mobilization, and therefore nutrient mobilization has the potential to occur. These data combined with high-resolution multibeam and hydrodynamic data will allow for future models of water flow and remobilization studies in the future.

Deep Subsurface Life from North Pond: Enrichment, Isolation, Characterization and Genomes of Heterotrophic Bacteria.

PubMed

Russell, Joseph A; León-Zayas, Rosa; Wrighton, Kelly; Biddle, Jennifer F

2016-01-01

Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic water-column west of the Mid-Atlantic Ridge at 22°N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP Hole U1382B at 4 and 68 m below seafloor (mbsf). These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sediment column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, initial characterization and genomes of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2%) relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. The cultures from this study represent members of abundant phyla, as determined by amplicon sequencing of environmental DNA extracts, and allow for further studies into geochemical factors impacting life in the deep subsurface.

What can Subglacial Sediment Tell us About the Underlying Geology and the Dynamic of the West-Antarctic Ice Sheet?

NASA Astrophysics Data System (ADS)

Vogel, S. W.; Tulaczyk, S. M.; Carter, S.; Grunow, A.

2003-12-01

The West-Antarctic Ice Sheet (WAIS) is the second largest ice sheet in the world. Its dynamic is extensively studied due to the proposed threat of rapid disintegration and associated sea level rise (Mercer, 1971). Most of its ice drains through a few fast flowing (>100 m/yr) ice streams and outlet glaciers. Subglacial conditions in particular the distribution of basal water and the availability of subglacial sediment plays an important role for their location and extent. Subglacial geology in particular the distribution of sedimentary basin fill, providing material for a lubricating subglacial till layer, may pose a limit on the inland extent of the fast flowing ice stream. Subglacial volcanism and associated elevated geothermal heat fluxes may provide crucial subglacial melt water for ice stream lubrication. We have studied sediment from the base of the WAIS to elucidate questions about the existence of subglacial volcanism and to determine the provenance of the subglacial sediment. Within this study we measured clay mineralogy, sand petrography, magnetic and geochemical properties of subglacial and englacial sediment from different locations in the Ross Sea-catchment area of the WAIS. Our samples come from Whillans-, Kamb- and Bindschadler Ice Stream as well as from Siple Dome, Crary Ice Rise and Byrd Station. Most of our sediment samples represent samples of subglacial till, which in earlier studies have been characterized as reworked marine sediment of Cenozoic age. The englacial sediment samples come from basal ice. Our study so far has found no positive evidence for the existence of subglacial volcanism beneath the WAIS. The mineralogy as well as the REE-pattern of our samples correspond better with a crustal source for the sediment than Cenozoic basalts. The isotopic composition of our samples (Nd/Sm, Rb/Sr) show differences between individual ice streams locations as well as differences between different grain size fractions. TDM-ages range from ~900 Ma to 1800 Ma; ENd between -4 to -12 and 87Sr/86Sr ~0.715 to ~0.735. Our preliminary geochemical results so far point to rocks from outcrops in the upstream areas of the individual ice streams as provenance for their sediment (Horlick Mountains and Whitmore Mountains) with a possibly small East-Antarctic component.

MAHLI at the Rocknest sand shadow: Science and science-enabling activities

NASA Astrophysics Data System (ADS)

Minitti, M. E.; Kah, L. C.; Yingst, R. A.; Edgett, K. S.; Anderson, R. C.; Beegle, L. W.; Carsten, J. L.; Deen, R. G.; Goetz, W.; Hardgrove, C.; Harker, D. E.; Herkenhoff, K. E.; Hurowitz, J. A.; Jandura, L.; Kennedy, M. R.; Kocurek, G.; Krezoski, G. M.; Kuhn, S. R.; Limonadi, D.; Lipkaman, L.; Madsen, M. B.; Olson, T. S.; Robinson, M. L.; Rowland, S. K.; Rubin, D. M.; Seybold, C.; Schieber, J.; Schmidt, M.; Sumner, D. Y.; Tompkins, V. V.; Van Beek, J. K.; Van Beek, T.

2013-11-01

Martian solar days 57-100, the Mars Science Laboratory Curiosity rover acquired and processed a solid (sediment) sample and analyzed its mineralogy and geochemistry with the Chemistry and Mineralogy and Sample Analysis at Mars instruments. An aeolian deposit—herein referred to as the Rocknest sand shadow—was inferred to represent a global average soil composition and selected for study to facilitate integration of analytical results with observations from earlier missions. During first-time activities, the Mars Hand Lens Imager (MAHLI) was used to support both science and engineering activities related to sample assessment, collection, and delivery. Here we report on MAHLI activities that directly supported sample analysis and provide MAHLI observations regarding the grain-scale characteristics of the Rocknest sand shadow. MAHLI imaging confirms that the Rocknest sand shadow is one of a family of bimodal aeolian accumulations on Mars—similar to the coarse-grained ripples interrogated by the Mars Exploration Rovers Spirit and Opportunity—in which a surface veneer of coarse-grained sediment stabilizes predominantly fine-grained sediment of the deposit interior. The similarity in grain size distribution of these geographically disparate deposits support the widespread occurrence of bimodal aeolian transport on Mars. We suggest that preservation of bimodal aeolian deposits may be characteristic of regions of active deflation, where winnowing of the fine-sediment fraction results in a relatively low sediment load and a preferential increase in the coarse-grained fraction of the sediment load. The compositional similarity of Martian aeolian deposits supports the potential for global redistribution of fine-grained components, combined with potential local contributions.

Microbial processes and communities in sediment samples along a transect across the Lusi mud volcano, Indonesia

NASA Astrophysics Data System (ADS)

Krueger, Martin; Straaten, Nontje; Mazzini, Adriano

2015-04-01

The Lusi eruption represents one of the largest ongoing sedimentary hosted geothermal systems. This eruption started in 2006 following to a 6.3 M earthquake that stroke Java Island. Since then it has been spewing boiling mud from a central crater with peaks reaching 180.000 m3 per day. Today an area of about 8 km2 is covered by locally dried mud breccia where a network of hundreds of satellite seeping pools is active. Numerous investigations focused on the study of offshore microbial colonies that commonly thrive at offshore methane seeps and mud volcanoes, however very little has been done for onshore seeping structures. Lusi represents a unique opportunity to complete a comprehensive study of onshore microbial communities fed by the seepage of CH4 and CO2 as well as of heavier liquid hydrocarbons originating from several km below the surface. We conducted a sampling campaign at the Lusi site collecting samples of fresh mud close to the erupting crater using a remote controlled drone. In addition we completed a transect towards outer parts of the crater to collect older, weathered samples for comparison. In all samples active microorganisms were present. The highest activities for CO2 and CH4 production as well as for CH4 oxidation and hydrocarbon degradation were observed in medium-age mud samples collected roughly in the middle of the transect. Rates for aerobic methane oxidation were high, as was the potential of the microbial communities to degrade hydrocarbons (oils, alkanes, BTEX tested). The data suggests a transition of microbial populations from an anaerobic, hydrocarbon-driven metabolism in fresher samples from center or from small seeps to more generalistic, aerobic microbial communities in older, more consolidated sediments. Currently, the microbial communities in the different sediment samples are analyzed using quantitative PCR and T-RFLP combined with MiSeq sequencing. This study represents an initial step to better understand onshore seepage systems and provides an ideal analogue for comparison with the better investigated offshore structures.

Spatial analysis of soil erosion and sediment fluxes: a paired watershed study of two Rappahannock River tributaries, Stafford County, Virginia.

PubMed

Ricker, Matthew C; Odhiambo, Ben K; Church, Joseph M

2008-05-01

Soil erosion is a serious problem in areas with expanding construction, agricultural production, and improper storm water management. It is important to understand the major processes affecting sediment delivery to surficial water bodies in order to tailor effective mitigation and outreach activities. This study analyzes how naturally occurring and anthropogenic influences, such as urbanization and soil disturbance on steep slopes, are reflected in the amount of soil erosion and sediment delivery within sub-watershed-sized areas. In this study, two sub-watersheds of the Rappahannock River, Horsepen Run and Little Falls Run, were analyzed using the Revised Universal Soil Loss Equation (RUSLE) and a sediment delivery ratio (SDR) to estimate annual sediment flux rates. The RUSLE/SDR analyses for Horsepen Run and Little Falls Run predicted 298 Mg/y and 234 Mg/y, respectively, but nearly identical per-unit-area sediment flux rates of 0.15 Mg/ha/y and 0.18 Mg/ha/y. Suspended sediment sampling indicated greater amounts of sediment in Little Falls Run, which is most likely due to anthropogenic influences. Field analyses also suggest that all-terrain vehicle crossings represent the majority of sediment flux derived from forested areas of Horsepen Run. The combined RUSLE/SDR and field sampling data indicate that small-scale anthropogenic disturbances (ATV trails and construction sites) play a major role in overall sediment flux rates for both basins and that these sites must be properly accounted for when evaluating sediment flux rates at a sub-watershed scale.

The Bacterial Community Structure of Hydrocarbon-Polluted Marine Environments as the Basis for the Definition of an Ecological Index of Hydrocarbon Exposure

PubMed Central

Lozada, Mariana; Marcos, Magalí S.; Commendatore, Marta G.; Gil, Mónica N.; Dionisi, Hebe M.

2014-01-01

The aim of this study was to design a molecular biological tool, using information provided by amplicon pyrosequencing of 16S rRNA genes, that could be suitable for environmental assessment and bioremediation in marine ecosystems. We selected 63 bacterial genera that were previously linked to hydrocarbon biodegradation, representing a minimum sample of the bacterial guild associated with this process. We defined an ecological indicator (ecological index of hydrocarbon exposure, EIHE) using the relative abundance values of these genera obtained by pyrotag analysis. This index reflects the proportion of the bacterial community that is potentially capable of biodegrading hydrocarbons. When the bacterial community structures of intertidal sediments from two sites with different pollution histories were analyzed, 16 of the selected genera (25%) were significantly overrepresented with respect to the pristine site, in at least one of the samples from the polluted site. Although the relative abundances of individual genera associated with hydrocarbon biodegradation were generally low in samples from the polluted site, EIHE values were 4 times higher than those in the pristine sample, with at least 5% of the bacterial community in the sediments being represented by the selected genera. EIHE values were also calculated in other oil-exposed marine sediments as well as in seawater using public datasets from experimental systems and field studies. In all cases, the EIHE was significantly higher in oiled than in unpolluted samples, suggesting that this tool could be used as an estimator of the hydrocarbon-degrading potential of microbial communities. PMID:24964812

The bacterial community structure of hydrocarbon-polluted marine environments as the basis for the definition of an ecological index of hydrocarbon exposure.

PubMed

Lozada, Mariana; Marcos, Magalí S; Commendatore, Marta G; Gil, Mónica N; Dionisi, Hebe M

2014-09-17

The aim of this study was to design a molecular biological tool, using information provided by amplicon pyrosequencing of 16S rRNA genes, that could be suitable for environmental assessment and bioremediation in marine ecosystems. We selected 63 bacterial genera that were previously linked to hydrocarbon biodegradation, representing a minimum sample of the bacterial guild associated with this process. We defined an ecological indicator (ecological index of hydrocarbon exposure, EIHE) using the relative abundance values of these genera obtained by pyrotag analysis. This index reflects the proportion of the bacterial community that is potentially capable of biodegrading hydrocarbons. When the bacterial community structures of intertidal sediments from two sites with different pollution histories were analyzed, 16 of the selected genera (25%) were significantly overrepresented with respect to the pristine site, in at least one of the samples from the polluted site. Although the relative abundances of individual genera associated with hydrocarbon biodegradation were generally low in samples from the polluted site, EIHE values were 4 times higher than those in the pristine sample, with at least 5% of the bacterial community in the sediments being represented by the selected genera. EIHE values were also calculated in other oil-exposed marine sediments as well as in seawater using public datasets from experimental systems and field studies. In all cases, the EIHE was significantly higher in oiled than in unpolluted samples, suggesting that this tool could be used as an estimator of the hydrocarbon-degrading potential of microbial communities.

Potential Mechanisms for Microbial Energy Acquisition in Oxic Deep-Sea Sediments

PubMed Central

Heidelberg, John F.

2016-01-01

ABSTRACT The South Pacific Gyre (SPG) possesses the lowest rates of sedimentation, surface chlorophyll concentration, and primary productivity in the global oceans. As a direct result, deep-sea sediments are thin and contain small amounts of labile organic carbon. It was recently shown that the entire SPG sediment column is oxygenated and may be representative of up to a third of the global marine environment. To understand the microbial processes that contribute to the removal of the labile organic matter at the water-sediment interface, a sediment sample was collected and subjected to metagenomic sequencing and analyses. Analysis of nine partially reconstructed environmental genomes, which represent approximately one-third of the microbial community, revealed that the members of the SPG surface sediment microbial community are phylogenetically distinct from surface/upper-ocean organisms. These genomes represent a wide distribution of novel organisms, including deep-branching Alphaproteobacteria, two novel organisms within the Proteobacteria, and new members of the Nitrospirae, Nitrospinae, and candidate phylum NC10. These genomes contain evidence for microbially mediated metal (iron/manganese) oxidation and carbon fixation linked to nitrification. Additionally, despite hypothesized energy limitation, members of the SPG microbial community had motility and chemotaxis genes and possessed mechanisms for the degradation of high-molecular-weight organic matter. This study contributes to our understanding of the metabolic potential of microorganisms in deep-sea oligotrophic sediments and their impact on local carbon geochemistry. IMPORTANCE This research provides insight into the microbial metabolic potential of organisms inhabiting oxygenated deep-sea marine sediments. Current estimates suggest that these environments account for up to a third of the global marine sediment habitat. Nine novel deep-sea microbial genomes were reconstructed from a metagenomic data set and expand the limited number of environmental genomes from deep-sea sediment environments. This research provides phylogeny-linked insight into critical metabolisms, including carbon fixation associated with nitrification, which is assignable to members of the marine group 1 Thaumarchaeota, Nitrospinae, and Nitrospirae and neutrophilic metal (iron/manganese) oxidation assignable to a novel proteobacterium. PMID:27208118

Potential Mechanisms for Microbial Energy Acquisition in Oxic Deep-Sea Sediments.

PubMed

Tully, Benjamin J; Heidelberg, John F

2016-07-15

The South Pacific Gyre (SPG) possesses the lowest rates of sedimentation, surface chlorophyll concentration, and primary productivity in the global oceans. As a direct result, deep-sea sediments are thin and contain small amounts of labile organic carbon. It was recently shown that the entire SPG sediment column is oxygenated and may be representative of up to a third of the global marine environment. To understand the microbial processes that contribute to the removal of the labile organic matter at the water-sediment interface, a sediment sample was collected and subjected to metagenomic sequencing and analyses. Analysis of nine partially reconstructed environmental genomes, which represent approximately one-third of the microbial community, revealed that the members of the SPG surface sediment microbial community are phylogenetically distinct from surface/upper-ocean organisms. These genomes represent a wide distribution of novel organisms, including deep-branching Alphaproteobacteria, two novel organisms within the Proteobacteria, and new members of the Nitrospirae, Nitrospinae, and candidate phylum NC10. These genomes contain evidence for microbially mediated metal (iron/manganese) oxidation and carbon fixation linked to nitrification. Additionally, despite hypothesized energy limitation, members of the SPG microbial community had motility and chemotaxis genes and possessed mechanisms for the degradation of high-molecular-weight organic matter. This study contributes to our understanding of the metabolic potential of microorganisms in deep-sea oligotrophic sediments and their impact on local carbon geochemistry. This research provides insight into the microbial metabolic potential of organisms inhabiting oxygenated deep-sea marine sediments. Current estimates suggest that these environments account for up to a third of the global marine sediment habitat. Nine novel deep-sea microbial genomes were reconstructed from a metagenomic data set and expand the limited number of environmental genomes from deep-sea sediment environments. This research provides phylogeny-linked insight into critical metabolisms, including carbon fixation associated with nitrification, which is assignable to members of the marine group 1 Thaumarchaeota, Nitrospinae, and Nitrospirae and neutrophilic metal (iron/manganese) oxidation assignable to a novel proteobacterium. Copyright © 2016 Tully and Heidelberg.

Some thoughts on problems associated with various sampling media used for environmental monitoring

USGS Publications Warehouse

Horowitz, A.J.

1997-01-01

Modern analytical instrumentation is capable of measuring a variety of trace elements at concentrations down into the single or double digit parts-per-trillion (ng l-1) range. This holds for the three most common sample media currently used in environmental monitoring programs: filtered water, whole-water and separated suspended sediment. Unfortunately, current analytical capabilities have exceeded the current capacity to collect both uncontaminated and representative environmental samples. The success of any trace element monitoring program requires that this issue be both understood and addressed. The environmental monitoring of trace elements requires the collection of calendar- and event-based dissolved and suspended sediment samples. There are unique problems associated with the collection and chemical analyses of both types of sample media. Over the past 10 years, reported ambient dissolved trace element concentrations have declined. Generally, these decreases do not reflect better water quality, but rather improvements in the procedures used to collect, process, preserve and analyze these samples without contaminating them during these steps. Further, recent studies have shown that the currently accepted operational definition of dissolved constituents (material passing a 0.45 ??m membrane filter) is inadequat owing to sampling and processing artifacts. The existence of these artifacts raises questions about the generation of accurate, precise and comparable 'dissolved' trace element data. Suspended sediment and associated trace elements can display marked short- and long-term spatial and temporal variability. This implies that spatially representative samples only can be obtained by generating composites using depth- and width-integrated sampling techniques. Additionally, temporal variations have led to the view that the determination of annual trace element fluxes may require nearly constant (e.g., high-frequency) sampling and subsequent chemical analyses. Ultimately, sampling frequency for flux estimates becomes dependent on the time period of concern (daily, weekly, monthly, yearly) and the amount of acceptable error associated with these estimates.

Detrital thermochronology of Rhine, Elbe and Meuse river sediment (Central Europe): implications for provenance, erosion and mineral fertility

NASA Astrophysics Data System (ADS)

Glotzbach, C.; Busschers, F. S.; Winsemann, J.

2018-03-01

Here we present detrital apatite fission track (AFT), zircon fission track (ZFT) and a few apatite (U-Th)/He (AHe) data of Middle Pleistocene to modern Rhine, Meuse and Elbe river sediments in order to resolve processes that control detrital age distributions (provenance, erosion and mineral fertility). We used a modelling approach to compare observed with theoretically predicted age distributions from an interpolated in situ AFT and ZFT age map. In situ cooling ages do show large differences in the Rhine drainage basin, facilitating the differentiation between different source regions. Inconsistencies between observed and theoretical age distributions of the Meuse and Elbe samples can be explained by mixing and reworking of sediments with different provenances (Meuse Middle Pleistocene terrace sediment) and a yet unexplored source region with old AFT ages (Elbe samples). Overall, the results show that detrital thermochronology is capable of identifying the provenance of Middle Pleistocene to modern sediments. The AFT age distributions of Rhine sediments are dominated ( 70%) by AFT ages representing the Alps. A possible explanation is higher erosion rates in the Alps as compared to areas outside the Alps. A Late Pleistocene sample from the Upper Rhine Graben contains apatite grains from the Molasse and Hegau volcanics, which we explain with a shift of the headwaters of the Rhine to the north as a result of intense Middle Pleistocene Riss glaciation. Contrary to the observed dominance of Alpine-derived AFT ages in Rhine sediments, the relative contribution of zircon ages with sources in the Alps is lower and significantly decreases downstream, suggesting a major source of zircons outside the Alps. This can be explained by increased zircon fertility of sediments derived from the Rhenish massif. Therefore, we conclude that erosion and mineral fertility are the main processes controlling detrital AFT and ZFT age distributions of the sampled river sediment. In case of the Rhine samples, AFT age distributions are mainly controlled by differences in erosion rates, whereas this impact is completely balanced by differences in mineral fertility for the ZFT data.

Geochemistry of Permian rocks from the margins of the Phosphoria Basin

USGS Publications Warehouse

Perkins, Robert B.; McIntyre, Brandie; Hein, James R.; Piper, David Z.

2003-01-01

The Permian Phosphoria Formation and interbedded units of the Park City Formation and Shedhorn Sandstone in western Wyoming represent deposition along a carbonate ramp at the eastern margin of the Phosphoria Basin, with portions of the Phosphoria units reflecting periods of upwelling and widespread phosphogenesis. Thickness-weighted slab-samples of these units were collected at a maximum interval of 3 m along an 80+ m-length of unweathered core and analyzed for major-, minor-, and trace-element contents. Interpretations of geochemistry were made within the confines of a previously recognized sequence stratigraphy framework. Major shifts in element ratios characteristic of terrigenous debris that occur at sequence boundaries at the base of the Meade Peak and Retort Members of the Phosphoria Formation are attributed to changing sediment sources. Inter-element relationships in the marine fraction indicate that bottom waters of the Phosphoria Basin were predominantly denitrifying during deposition of the Ervay, Grandeur, and Phosphoria sediments, although sulfate-reducing conditions may have existed during deposition of the lower Meade Peak sediments. Oxic conditions were prevalent during deposition of a large part of the Franson Member, which represents sedimentation in a shallow, inner- to back-ramp setting. Variations in sediment facies and organic matter and trace element contents largely reflect changes in Permian sea level. Changes in sea level in basin-margin areas, such as represented by the study section, may have affected the oxidation of settling organic matter, the foci of intersection of upwelling bottom waters with the photic zone, the rate of terrigenous sedimentation, and, ultimately, the overall environment of deposition. Our study suggests that phosphogenesis can occur under lowstand, transgressive, and highstand conditions in marginal areas, assuming water depths sufficient for upwelling to occur. Formation of phosphorite layers under upwelling conditions appears to have been most dependent on a lack of dilution by terrigenous sedimentation and carbonate shoaling. Differences in the geochemistry between two similar environments represented by the upper and lower Phosphoria units are largely attributed to higher rates of diluting terrigenous sediment during deposition of the upper unit. This is consistent with prior interpretations of a more shoreward setting for the upper Phosphoria.

Laboratory Study of Quaternary Sediment Resistivity Related to Groundwater Contamination at Mae-Hia Landfill, Mueang District, Chiang Mai Province

NASA Astrophysics Data System (ADS)

Sichan, N.

2007-12-01

This study was aimed to understand the nature of the resistivity value of the sediment when it is contaminated, in order to use the information solving the obscure interpretation in the field. The pilot laboratory experiments were designed to simulate various degree of contamination and degree of saturation then observe the resulting changes in resistivity. The study was expected to get a better understanding of how various physical parameters effect the resistivity values in term of mathematic function. And also expected to apply those obtained function to a practical quantitatively interpretation. The sediment underlying the Mae-Hia Landfill consists of clay-rich material, with interfingerings of colluvium and sandy alluvium. A systematic study identified four kinds of sediment, sand, clayey sand, sandy clay, and clay. Representative sediment and leachate samples were taken from the field and returned to the laboratory. Both the physical and chemical properties of the sediments and leachate were analyzed to delineate the necessary parameters that could be used in Archie's equation. Sediment samples were mixed with various concentration of leachate solutions. Then the resistivity values were measured at various controlled steps in the saturation degree in a well- calibrated six-electrode model resistivity box. The measured resistivity values for sand, clayey sand, sandy clay when fully and partly saturated were collected, then plotted and fitted to Archie's equation, to obtain a mathematical relationship between bulk resistivity, porosity, saturation degree and resistivity of pore fluid. The results fit well to Archie's equation, and it was possible to determine all the unknown parameters representative of the sediment samples. For sand, clayey sand, sandy clay, and clay, the formation resistivity factors (F) are 2.90, 5.77, 7.85, and 7.85 with the products of cementation factor (m) and the pore geometry factors (a) (in term of -am) are 1.49, -1.63, -1.92, -2.24 and the saturation exponents (n) are 2.06, 2.58, 3.52, and 2.46, respectively. These results were used to reinterpret the existing resistivity data of this area. The result of this reinterpretation is a map showing the quantitative distribution of the contaminant plume in the vicinity of the Mae-Hia Landfill.

Evaluation of dredged material proposed for ocean disposal from Bronx River Project Area, New York

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gruendell, B.D.; Gardiner, W.W.; Antrim, L.D.

1996-12-01

The objective of the Bronx River project was to evaluate proposed dredged material from the Bronx River project area in Bronx, New York, to determine its suitability for unconfined ocean disposal at the Mud Dump Site. Bronx River was one of five waterways that the US Army Corps of Engineers-New York District (USAGE-NYD) requested the Battelle Marine Sciences Laboratory (MSL) to sample and to evaluate for dredging and disposal. Sediment samples were submitted for physical and chemical analyses, chemical analyses of dredging site water and elutriate, benthic and water-column acute toxicity tests, and bioaccumulation studies. Fifteen individual sediment core samplesmore » collected from the Bronx River project area were analyzed for grain size, moisture content, and total organic carbon (TOC). One composite sediment sample, representing the entire reach of the area proposed for dredging, was analyzed for bulk density, specific gravity, metals, chlorinated pesticides, polychlorinated biphenyl (PCB) congeners, polynuclear aromatic hydrocarbons (PAH), and 1,4- dichlorobenzene. Dredging site water and elutriate water, which was prepared from the suspended-particulate phase (SPP) of the Bronx River sediment composite, were analyzed for metals, pesticides, and PCBS.« less

Hydrocarbon gases in Baikal bottom sediments: preliminary results of the Second international Class@Baikal cruise

NASA Astrophysics Data System (ADS)

Vidischeva, Olesya; Akhmanov, Grigorii; Khlystov, Oleg; Giliazetdinova, Dina

2016-04-01

In July 2015 the research cruise in the waters of Lake Baikal was carried out onboard RV "G.Yu. Vereshchagin". The expedition was organized by Lomonosov Moscow State University and Limnological Institute of Russian Academy of Sciences. The main purpose of the expedition was to study the modern sedimentation and natural geological processes on the bottom of Lake Baikal. One of the tasks of the cruise was to conduct gas-geochemical survey of bottom sediments. The samples of hydrocarbon gases were collected during the cruise. Subsequent study of the composition and origin of the sampled gas was carried out in the laboratories of Moscow State University. 708 samples from 61 bottom sampling stations were studied. Analyzed samples are from seven different areas located in the southern and central depressions of the lake: (1) "Goloustnoe" seepage area; (2) Bolshoy mud volcano; (3) Elovskiy Area; (4) "Krasny Yar" Seep; (5) "St. Petersburg" Seep; (6) Khuray deep-water depositional system; and (7) Kukuy Griva (Ridge) area. The results of molecular composition analysis indicate that hydrocarbon gases in bottom sediments from almost all sampling stations are represented mostly by pure methane. Ethane was detected only in some places within "Krasny Yar", "Goloustnoe" and "St. Petersburg" seepage areas. The highest concentrations of methane were registered in the sediments from the "Krasny Yar" area - 14 457 μl/l (station TTR-BL15-146G) - and from the "St. Petersburg" area - 13 684 μl/l (station TTR-BL15-125G). The sediments with high concentrations of gases were sampled from active fluid discharge areas, which also can be well distinguished on the seismic profiles. Gas hydrates were obtained in the areas of "Krasny Yar", "Goloustnoe", and "St. Petersburg" seeps and in the area of the Bolshoy mud volcano. Isotopic composition δ13C(CH4) was studied for 100 samples of hydrocarbon gases collected in areas with high methane concentration in bottom sediments. The average value is -53‰. Overall bottom sediments of the Baikal Lake are very saturated in biogenic shallow methane. However, some evidences of thermogenic methane contribution can be recorded in the areas of focused fluid flows from deeper strata (e.g. mud volcanoes, seepage sites, etc.). Scrupulous examination of gas composition data results in understanding of scope of activity of individual structure and rough estimation of thermogenic gas flow input.

Accumulation of sediment-associated viruses in shellfish.

PubMed Central

Landry, E F; Vaughn, J M; Vicale, T J; Mann, R

1983-01-01

The present study focused on the importance of contaminated sediments in shellfish accumulation of human viruses. Epifaunal (Crassostrea virginica) and infaunal (Mercenaria mercenaria) shellfish, placed on or in cores, were exposed to either resuspended or undisturbed sediments containing bound poliovirus type 1 (LSc 2ab). Consistent bioaccumulation by oysters (four of five trials) was only noted when sediment-bound viruses occurred in the water column. Virus accumulation was observed in a single instance where sediments remained in an undisturbed state. While the incidence of bioaccumulation was higher with resuspended rather than undisturbed contaminated sediment, the actual concentration of accumulated viruses was not significantly different. The accumulation of viruses from oysters residing on uninoculated sediments. When clams were exposed to undisturbed, virus-contaminated sediments, two of five shellfish pools yielded viral isolates. Bioaccumulation of undisturbed sediments by these bivalves was considered marginal when related to the concentration of virus in contaminated sediments; they would only represent a significant threat when suspended in the water column. Arguments were advanced for water-column sampling in the region of the water-sediment interface to provide an accurate determination of the virological quality of shellfish harvesting waters. PMID:6297392

Preliminary Assessment/Site Inspection Work Plan for Granite Mountain Radio Relay System

DTIC Science & Technology

1994-09-01

represent field conditions, and (3) sampling results are repeatable. Final (04 WV---,,1-, ,W•, S 2, mbr . 19W4 13 RyCWed 1.5.2 Sample Handling Sample...procedures specified in Section 2.1.3. Samples collected from shallow depths will be obtained by submerging a stainless- steel, Teflon, or glass... submerged in a manner that minimizes agitation of sediment and the water sample. If a seep or spring has minimal discharge flow, gravel, boulders, and soil

Using cosmogenic nuclides to contrast rates of erosion and sediment yield in a semi-arid, arroyo-dominated landscape, Rio Puerco Basin, New Mexico

USGS Publications Warehouse

Bierman, P.R.; Reuter, J.M.; Pavich, M.; Gellis, A.C.; Caffee, M.W.; Larsen, J.

2005-01-01

Analysis of in-situ-produced 10Be and 26Al in 52 fluvial sediment samples shows that millennial-scale rates of erosion vary widely (7 to 366 m Ma-1) through the lithologically and topographically complex Rio Puerco Basin of northern New Mexico. Using isotopic analysis of both headwater and downstream samples, we determined that the semi-arid, Rio Puerco Basin is eroding, on average, about 100 m Ma-1. This rapid rate of erosion is consistent with estimates made using other techniques and is likely to result from a combination of easily eroded lithologies, sparse vegetation, and monsoon-dominated rainfall. Data from 331 stream water samples collected by the US Geological Survey between 1960 and 1995 are consistent with basin-wide, average chemical denudation rates of only about 1??4 m Ma-1; thus, the erosion rates we calculate may be considered rates of sediment generation because physical weathering accounts for almost 99 per cent of mass loss. The isotopic data reveal that sediment is generally well mixed downstream with the area-weighted average sediment generation rate for 16 headwater samples (234 ton km-2 a-1 for basin area 170 to 1169 km2) matching well that estimated from a single sample collected far downstream (238 ton km-2 a-1, basin area = 14 225 km2). A series of 15 samples, collected from an arroyo wall and representing deposition through the late Holocene, indicates that 10Be concentration in sediment delivered by the fluvial system has not changed appreciably over the last 1200 years despite at least two cycles of arroyo cutting and filling. Other samples (n = 21) were collected along the drainage network. Rio Puerco erosion rates scale directly with a variety of metrics describing vegetation, precipitation, and rock erodibility. Using the headwater basins for calibration, the erosion rates for both the downstream samples and also the data set as a whole, are best modelled by considering a combination of relief and vegetation metrics, both of which co-vary with precipitation and erodibility as inferred from lithology. On average, contemporary sediment yields, determined by monitoring suspended-sediment discharge, exceed cosmogenically determined millennial-scale erosion rates by nearly a factor of two. This discrepancy, between short-term rates of sediment yield and long-term rates of erosion, suggests that more sediment is currently being exported from the basin than is being produced. Because the failure of incised channel walls and the head cutting of arroyo complexes appear to be the main sources of channel sediment today, this incongruence between rates of sediment supply and sediment yield is likely to be transitory, reflecting the current states of the arroyo cycle and perhaps the influence of current or past land-use patterns. Copyright ?? 2005 John Wiley & Sons, Ltd.

Genotoxic and teratogenic effect of freshwater sediment samples from the Rhine and Elbe River (Germany) in zebrafish embryo using a multi-endpoint testing strategy.

PubMed

Garcia-Käufer, M; Gartiser, S; Hafner, C; Schiwy, S; Keiter, S; Gründemann, C; Hollert, H

2015-11-01

The embryotoxic potential of three model sediment samples with a distinct and well-characterized pollutant burden from the main German river basins Rhine and Elbe was investigated. The Fish Embryo Contact Test (FECT) in zebrafish (Danio rerio) was applied and submitted to further development to allow for a comprehensive risk assessment of such complex environmental samples. As particulate pollutants are constructive constituents of sediments, they underlay episodic source-sink dynamics, becoming available to benthic organisms. As bioavailability of xenobiotics is a crucial factor for ecotoxicological hazard, we focused on the direct particle-exposure pathway, evaluating throughput-capable endpoints and considering toxicokinetics. Fish embryo and larvae were exposed toward reconstituted (freeze-dried) sediment samples on a microcosm-scale experimental approach. A range of different developmental embryonic stages were considered to gain knowledge of potential correlations with metabolic competence during the early embryogenesis. Morphological, physiological, and molecular endpoints were investigated to elucidate induced adverse effects, placing particular emphasis on genomic instability, assessed by the in vivo comet assay. Flow cytometry was used to investigate the extent of induced cell death, since cytotoxicity can lead to confounding effects. The implementation of relative toxicity indices further provides inter-comparability between samples and related studies. All of the investigated sediments represent a significant ecotoxicological hazard by disrupting embryogenesis in zebrafish. Beside the induction of acute toxicity, morphological and physiological embryotoxic effects could be identified in a concentration-response manner. Increased DNA strand break frequency was detected after sediment contact in characteristic non-monotonic dose-response behavior due to overlapping cytotoxic effects. The embryonic zebrafish toxicity model along with the in vivo comet assay and molecular biomarker analysis should prospectively be considered to assess the ecotoxicological potential of sediments allowing for a comprehensive hazard ranking. In order to elucidate mode of action, novel techniques such as flow cytometry have been adopted and proved to be valuable tools for advanced risk assessment and management.

Sediment studies associated with drilling activity on a tropical shallow shelf.

PubMed

Souza, Claudete R; Vital, Helenice; Melo, Germano; Souza, Cleuneide R; da Silva Nogueira, Mary Lucia; Tabosa, Werner Farkatt

2015-02-01

Environmental monitoring studies were developed in an area located on the outer shelf in the Potiguar Basin, Brazilian equatorial margin. This tropical shelf represents a modern, highly dynamic mixed carbonate-siliciclastic system. Field sampling was carried out during 3 cruises surrounding a shallow-water exploratory well to compare sediment properties of the seafloor, including grain size, texture, mineral composition, carbonate content, and organic matter, prior to drilling with samples obtained 3 and 12 months after drilling. The sample grid used had 16 stations located along 4 radials from 50 m the well up to a distance of 500 m. Sediments were analyzed in the first 0-2 cm and 0-10 cm layers. The results show that sedimentary cover around the well is dominated by bioclastic sediments, poor to very poorly sorted. Only minor sedimentological variations occurred in the area affected by drilling operations. The most noticeable effects were observed during the second cruise, in terms of a change in grain size distribution associated to a slight increase in siliciclastic content. This impact occurred in the most surficial sediment (0-2 cm), in the radials closest to the well (50 m), and could suggest the effects of drilling. However, in the third cruise, 1 year after drilling, the sediments return to show the same characteristics as in the first cruise. These results show no significant sedimentological variations due to drilling activity and indicate that ocean dynamics in this area was high enough to recover the environment original characteristics.

Diversity and Distribution Characteristics of Viruses in Soils of a Marine-Terrestrial Ecotone in East China.

PubMed

Yu, Dan-Ting; Han, Li-Li; Zhang, Li-Mei; He, Ji-Zheng

2018-02-01

A substantial gap remains in our understanding of the abundance, diversity, and ecology of viruses in soil although some advances have been achieved in recent years. In this study, four soil samples according to the salinity gradient from shore to inland in East China have been characterized. Results showed that spherical virus particles represented the largest viral component in all of the four samples. The viromes had remarkably different taxonomic compositions, and most of the sequences were derived from single-stranded DNA viruses, especially from families Microviridae and Circoviridae. Compared with viromes from other aquatic and sediment samples, the community compositions of our four soil viromes resembled each other, meanwhile coastal sample virome closely congregated with sediment and hypersaline viromes, and high salinity paddy soil sample virome was similar with surface sediment virome. Phylogenetic analysis of functional genes showed that four viromes have high diversity of the subfamily Gokushovirinae in family Microviridae and most of Circoviridae replicase protein sequences grouped within the CRESS-DNA viruses. This work provided an initial outline of the viral communities in marine-terrestrial ecotone and will improve our understanding of the ecological functions of soil viruses.

Molecular comparison of bacterial communities within iron-containing flocculent mats associated with submarine volcanoes along the Kermadec Arc.

PubMed

Hodges, Tyler W; Olson, Julie B

2009-03-01

Iron oxide sheaths and filaments are commonly found in hydrothermal environments and have been shown to have a biogenic origin. These structures were seen in the flocculent material associated with two submarine volcanoes along the Kermadec Arc north of New Zealand. Molecular characterization of the bacterial communities associated with the flocculent samples indicated that no known Fe-oxidizing bacteria dominated the recovered clone libraries. However, clones related to the recently described Fe-oxidizing bacterium Mariprofundus ferrooxydans were obtained from both the iron-containing flocculent (Fe-floc) and sediment samples, and peaks corresponding to Mariprofundus ferrooxydans, as well as the related clones, were observed in several of our terminal restriction fragment length polymorphism profiles. A large group of epsilonproteobacterial sequences, for which there is no cultured representative, dominated clones from the Fe-floc libraries and were less prevalent in the sediment sample. Phylogenetic analyses indicated that several operational taxonomic units appeared to be site specific, and statistical analyses of the clone libraries found that all samples were significantly different from each other. Thus, the bacterial communities in the Fe-floc samples were not more closely related to each other than to the sediment communities.

Impact of tsunami on texture and mineralogy of a major placer deposit in southwest coast of India

NASA Astrophysics Data System (ADS)

Babu, N.; Babu, D. S. Suresh; Das, P. N. Mohan

2007-03-01

The great Indonesian earth quake (26 December 2004) triggered a tsunami wave across the Bay of Bengal and Indian Ocean basins and has brought a major havoc in several countries including India. The coastal segment between Thotapalli and Valiazhikal in Kerala state of southwest India, where considerably rich beach placer deposit with ilmenite percentage of more than 70% is concentrated, has been investigated to understand the impact of tsunami on coastal sediments. The grain size analysis flashes out the significant differences between the pre- and post-tsunami littoral environments. While the mineral grains collected during pre-tsunami period show well-sorted nature, the post-tsunami samples represent moderately to poorly sorted nature. Similarly, unimodal and bimodal distributions of the sediments have been recorded for pre- and post-tsunami sediments, respectively. Further, mineral assemblages corresponding to before and after this major wave activity clearly indicate the large-scale redistribution of sediments. The post-tsunami sediments register increasing trends of garnet, sillimanite and rutile. The total heavy mineral percentage of the post-tsunami sediment also shows an improved concentration, perhaps due to the large-scale transport of lighter fraction. Magnetite percentage of post-tsunami samples reflects higher concentration compared to the pre-tsunami samples, indicating the intensity of reworking process. X-ray diffraction patterns of ilmenite grains have confirmed the increased presence of pseduorutile, and pseudobrookite in post-tsunami samples, which could be due to the mixing of more altered grains. SEM examination of grains also confirms the significant alteration patterns on the ubiquitous mineral of placer body, the ilmenite. The reason for these textural, mineralogical and micromorphological changes in heavy minerals particularly in ilmenite, could be due to the churning action on the deeper sediments of onshore region or on the sediments entrapped in the near shelf region of the area, by the ˜ 6 m high tsunami waves.

Using a forensic science approach to minimize environmental contamination and to identify microfibres in marine sediments.

PubMed

Woodall, Lucy C; Gwinnett, Claire; Packer, Margaret; Thompson, Richard C; Robinson, Laura F; Paterson, Gordon L J

2015-06-15

There is growing evidence of extensive pollution of the environment by microplastic, with microfibres representing a large proportion of the microplastics seen in marine sediments. Since microfibres are ubiquitous in the environment, present in the laboratory air and water, evaluating microplastic pollution is difficult. Incidental contamination is highly likely unless strict control measures are employed. Here we describe methods developed to minimize the amount of incidental post-sampling contamination when quantifying marine microfibre pollution. We show that our protocol, adapted from the field of forensic fibre examination, reduces fibre abundance by 90% and enables the quick screening of fibre populations. These methods therefore allow an accurate estimate of microplastics polluting marine sediments. In a case study from a series of samples collected on a research vessel, we use these methods to highlight the prevalence of microfibres as marine microplastics. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

Untersuchungen zum Vorkommen von Myxobakterien in von Meerwasser beeinflußten Substraten unter besonderer Berücksichtigung der Insel Helgoland

NASA Astrophysics Data System (ADS)

Rückert, G.

1984-03-01

Representatives of the family Myxococcaceae, Myxococcus fulvus and M. virescens as well as Archangium gephyra could be isolated from marine sediments (depth range 5 58 m), collected near the island of Helgoland (North Sea); dunes and rudiments of salt marshes additionally yielded M. coralloides and the rare species Melittangium licenicola and M. boletus (Cystobacteriaceae). In soil samples from the island, M. fulvus, M. virescens, M. coralloides, A. gephyra, Cystobacter fuscus and Stigmatella erecta were found. These results were confirmed by data, obtained from the coastal zone of the island of Amrum and marine sediments from various regions. On the other hand samples from shallow fresh water (depth range 0.3 1 m) proved to be richer in species. It is assumed that the myxobacteria found in marine sediments occur as resting cells.

Guidelines for collecting and processing samples of stream bed sediment for analysis of trace elements and organic contaminants for the National Water-Quality Assessment Program

USGS Publications Warehouse

Shelton, Larry R.; Capel, Paul D.

1994-01-01

A major component of the U.S. Geological Survey's National Water-Quality Assessment program is to assess the occurrence and distribution of trace elements and organic contaminants in streams. The first phase of the strategy for the assessment is to analyze samples of bed sediments from depositional zones. Fine-grained particles deposited in these zones are natural accumulators of trace elements and hydrophobic organic compounds. For the information to be comparable among studies in many different parts of the Nation, strategies for selecting stream sites and depositional zones are critical. Fine-grained surficial sediments are obtained from several depositional zones within a stream reach and composited to yield a sample representing average conditions. Sample collection and processing must be done consistently and by procedures specifically designed to separate the fine material into fractions that yield uncontaminated samples for trace-level analytes in the laboratory. Special coring samplers and other instruments made of Teflon are used for collection. Samples are processed through a 2.0-millimeter stainless-steel mesh sieve for organic contaminate analysis and a 63-micrometer nylon-cloth sieve for trace-element analysis. Quality assurance is maintained by strict collection and processing procedures, duplicate samplings, and a rigid cleaning procedure.

Diatoms dominate the eukaryotic metatranscriptome during spring in coastal 'dead zone' sediments.

PubMed

Broman, Elias; Sachpazidou, Varvara; Dopson, Mark; Hylander, Samuel

2017-10-11

An important characteristic of marine sediments is the oxygen concentration that affects many central metabolic processes. There has been a widespread increase in hypoxia in coastal systems (referred to as 'dead zones') mainly caused by eutrophication. Hence, it is central to understand the metabolism and ecology of eukaryotic life in sediments during changing oxygen conditions. Therefore, we sampled coastal 'dead zone' Baltic Sea sediment during autumn and spring, and analysed the eukaryotic metatranscriptome from field samples and after incubation in the dark under oxic or anoxic conditions. Bacillariophyta (diatoms) dominated the eukaryotic metatranscriptome in spring and were also abundant during autumn. A large fraction of the diatom RNA reads was associated with the photosystems suggesting a constitutive expression in darkness. Microscope observation showed intact diatom cells and these would, if hatched, represent a significant part of the pelagic phytoplankton biomass. Oxygenation did not significantly change the relative proportion of diatoms nor resulted in any major shifts in metabolic 'signatures'. By contrast, diatoms rapidly responded when exposed to light suggesting that light is limiting diatom development in hypoxic sediments. Hence, it is suggested that diatoms in hypoxic sediments are on 'standby' to exploit the environment if they reach suitable habitats. © 2017 The Author(s).

Metal contamination in urban street sediment in Pisa (Italy) can affect the production of antioxidant metabolites in Taraxacum officinale Weber.

PubMed

Bretzel, Francesca; Benvenuti, Stefano; Pistelli, Laura

2014-02-01

Taraxacum officinale Weber (dandelion) is a very ubiquitous species, and it can grow in urban environments on metal-polluted sediments deposited in the gutters. This study represents a preliminary step to verify the presence of metals in sediments collected in urban streets in Pisa and to assess the alteration in dandelion metabolites in order to understand its adaptation to polluted environments. The soil and sediments were collected at three urban streets and analyzed for total and extractable Cr, Pb, Cu, Ni, and Zn. The total values of Pb and Zn in street sediments exceeded the limits for residential areas of soils. Zn was the most mobile of the metals analyzed. Floating cultivations trials were set up with dandelion seedlings and street sediments. The metals were analyzed in roots and leaves. Antioxidant power, anthocyanins, polyphenols, non-protein thiols (NP-TH) and chlorophylls were measured in dandelion leaves. The first two parameters (anthocyanins and antioxidant power) were higher in the polluted samples compared to the control; chlorophyll content was lower in the treated samples, whereas NP-TH showed no differences. NP-TH groups determined in roots were associated with the root content of Zn and Pb. These results indicate that dandelion can tolerate plant stress by altering its metabolite content.

Marine sediment sample preparation for analysis for low concentrations of fine detrital gold

USGS Publications Warehouse

Clifton, H. Edward; Hubert, Arthur; Phillips, R. Lawrence

1967-01-01

Analyses by atomic absorption for detrital gold in more than 2,000 beach, offshore, marine-terrace, and alluvial sands from southern Oregon have shown that the values determined from raw or unconcentrated sediment containing small amounts of gold are neither reproducible nor representative of the initial sample. This difficulty results from a 'particle sparsity effect', whereby the analysis for gold in a given sample depends more upon the occurrence of random flakes of gold in the analyzed portion than upon the actual gold content of the sample. The particle sparsity effect can largely be eliminated by preparing a gold concentrate prior to analysis. A combination of sieve, gravimetric, and magnetic separation produces a satisfactory concentrate that yields accurate and reproducible analyses. In concentrates of nearly every marine and beach sand studied, the gold occurs in the nonmagnetic fraction smaller than 0.124 mm and with a specific gravity greater than 3.3. The grain size of gold in stream sediments is somewhat more variable. Analysis of concentrates provides a means of greatly increasing the sensitivity of the analytical technique in relation to the initial sample. Gold rarely exceeds 1 part per million in even the richest black sand analyzed; to establish the distribution of gold (and platinum) in marine sediments and its relationship to source and environmental factors, one commonly needs to know their content to the part per billion range. Analysis of a concentrate and recalculation to the value in the initial sample permits this degree of sensitivity.

Microplastic litter composition of the Turkish territorial waters of the Mediterranean Sea, and its occurrence in the gastrointestinal tract of fish.

PubMed

Güven, Olgaç; Gökdağ, Kerem; Jovanović, Boris; Kıdeyş, Ahmet Erkan

2017-04-01

Microplastic pollution of marine environment is receiving increased publicity over the last few years. The present survey is, according to our knowledge, the survey with the largest sample size analyzed, to date. In total, 1337 specimens of fish were examined for the presence of plastic microlitter representing 28 species and 14 families. In addition, samples of seawater and sediment were also analyzed for the quantification of microplastic in the same region. Samples of water/sediment were collected from 18 locations along the Mediterranean coast of Turkey. 94% of all collected plastic microlitter from the sea was in the size range between 0.1 and 2.5 mm, while the occurrence of other sizes was rare. The quantity of microplastic particles in surface water samples ranged from 16 339 to 520 213 per km 2 . Fish were collected from 10 locations from which 8 were either shared with or situated in the proximity of water/sediment sampling locations. A total of 1822 microplastic particles were extracted from stomach and intestines of fish. Majority of ingested particles were represented by fibers (70%) and hard plastic (20.8%), while the share of other groups: nylon (2.7%), rubber (0.8%) and miscellaneous plastic (5.5%) were low. The blue color of plastic was the most dominant color. 34% of all examined fish had microplastic in the stomach. On average, fish which had microplastic contained 1.80 particles per stomach. 41% of all fish had microplastic in the intestines with an average of 1.81 particles per fish. 771 specimens contained microplastic in either stomach and/or intestines representing 58% of the total sample with an average of 2.36 particles per fish. Microplastic was found in all species/families that had sample size of at least 2 individuals. The number of particles present in either stomach or intestines ranged between 1 and 35. Ingested microplastic had an average diameter ±SD of 656 ± 803 μm, however particles as small as 9 μm were detected. The trophic level of fish species had no influence whatsoever on the amount of ingested microplastic. Pelagic fish ingested more microplastic than demersal species. In general, fish that ingested higher number of microplastic particles originated from the sites that also had a higher particle count in the seawater and sediment. Copyright © 2017 Elsevier Ltd. All rights reserved.

Changes in Active Bacterial Communities before and after Dredging of Highly Polluted Baltic Sea Sediments▿

PubMed Central

Edlund, Anna; Jansson, Janet K.

2006-01-01

Bacteria residing in sediments have key functions in the marine food web. However, it has been difficult to correlate the identity and activity of bacteria in sediments due to lack of appropriate methods beyond cultivation-based techniques. Our aim was to use a combination of molecular approaches, bromodeoxyuridine incorporation and immunocapture, terminal restriction fragment length polymorphism, and cloning and sequencing of 16S rRNA genes to assess the composition of growing bacteria in Baltic Sea sediments. The study site was a highly polluted area off the Swedish coast. The sediments were sampled in two consecutive years, before and after remediation, by dredging of the top sediments. Levels of polyaromatic hydrocarbons (PAHs), mercury, and polychlorinated biphenyls were dramatically reduced as a result of the cleanup project. The compositions of growing members of the communities were significantly different at the two sampling periods. In particular, members from the class Deltaproteobacteria and genus Spirochaeta were more dominant before dredging, but members of the classes Gammaproteobacteria and the Flavobacteria represented the most dominant growing populations after dredging. We also cultivated isolates from the polluted sediments that could transform the model PAH compound, phenanthrene. Some of these isolates were confirmed as dominant growing populations by the molecular methods as well. This suite of methods enabled us to link the identity and activity of the members of the sediment communities. PMID:16950911

Evaluation of the method of collecting suspended sediment from large rivers by discharge-weighted pumping and separation by continuous- flow centrifugation

USGS Publications Warehouse

Moody, J.A.; Meade, R.H.

1994-01-01

The efficacy of the method is evaluated by comparing the particle size distributions of sediment collected by the discharge-weighted pumping method with the particle size distributions of sediment collected by depth integration and separated by gravitational settling. The pumping method was found to undersample the suspended sand sized particles (>63 ??m) but to collect a representative sample of the suspended silt and clay sized particles (<63??m). The success of the discharge-weighted pumping method depends on how homogeneously the silt and clay sized particles (<63 ??m) are distributed in the vertical direction in the river. The degree of homogeneity depends on the composition and degree of aggregation of the suspended sediment particles. -from Authors

Stream-sediment geochemistry in mining-impacted streams: Prichard, Eagle, and Beaver creeks, northern Coeur d'Alene Mining District, northern Idaho

USGS Publications Warehouse

Box, Stephen E.; Wallis, John C.; Briggs, Paul H.; Brown, Zoe Ann

2005-01-01

This report presents the results of one aspect of an integrated watershed-characterization study that was undertaken to assess the impacts of historical mining and milling of silver-lead-zinc ores on water and sediment composition and on aquatic biota in streams draining the northern part of the Coeur d?Alene Mining District in northern Idaho. We present the results of chemical analyses of 62 samples of streambed sediment, 19 samples of suspended sediment, 23 samples of streambank soil, and 29 samples of mine- and mill-related artificial- fill material collected from the drainages of Prichard, Eagle, and Beaver Creeks, all tributaries to the North Fork of the Coeur d?Alene River. All samples were sieved into three grain-size fractions (<0.063, 0.063?0.25, and 0.25?1.0 mm) and analyzed for 40 elements after four-acid digestion by inductively coupled plasma atomic-emission spectrometry and for mercury by continuous- flow cold-vapor atomic-absorption spectrometry in the U.S. Geological Survey laboratory in Denver, Colo. Historical mining of silver-lead-zinc ores in the headwater reaches of the Prichard Creek, Eagle Creek, and Beaver Creek drainages has resulted in enrichments of lead, zinc, mercury, arsenic, cadmium, silver, copper, cobalt, and, to a lesser extent, iron and manganese in streambed sediment. Using samples collected from the relatively unimpacted West Fork of Eagle Creek as representative of background compositions, streambed sediment in the vicinity of the mines and millsites has Pb and Zn contents of 20 to 100 times background values, decreasing to 2 to 5 times background values at the mouth of the each stream, 15 to 20 km downstream. Lesser enrichments (<10 times background values) of mercury and arsenic also are generally associated with, and decrease downstream from, historical silver-lead-zinc mining in the drainages. However, enrichments of arsenic and, to a lesser extent, mercury also are areally associated with the lode gold deposits along Prichard Creek near Murray, which were not studied here. Metal contents in samples of unfractionated suspended sediment collected during a high-flow event in April 2000 are generally similar to, but slightly higher than, those in the fine (<0.063- mm grain size) fraction of streambed sediment from the same sampling site. Although metal enrichment in streambed sediment typically begins adjacent to the mine portals and their associated mine-waste rock dumps, volumetrically larger inputs of metal-enriched materials were contributed by the ore-concentration millsites and their associated, more finely ground, more metal rich mill-tailings impoundments.

Characterization of bottom-sediment, water, and elutriate chemistry at selected stations at Reelfoot Lake, Tennessee

USGS Publications Warehouse

Broshears, R.E.

1991-01-01

To better-understand and predict the potential effect of dredging on water quality at Reelfoot Lake, chemical analyses were conducted on samples of lake water, bottom sediment, and elutriate water. Chemical analyses were conducted on samples of lake water, bottom sediment, and elutriate water collected at five stations in the lake during November 1988. Lake water was of the calcium magnesium bicarbonate type with an average dissolved-solids concentration of 120 milligrams per liter. Trace constituents were present in bottom sediments at concentrations representative of their average relative abundance in the earth?s crust. Elutriate waters prepared by mixing bottom sediment and lake water had suspended-solids concentrations as high as 2,000 milligrams per liter which exerted significant oxygen demand Trace constituents in the unfiltered elutriate waters were elevated with respect to lake water; elevated concentrations were attributable to the increased suspended-solids concentrations. Concentrations of total-recoverable copper, lead., and zinc in many elutriate waters exceeded U.S. Environmental Protection Agency?s water-quality criteria for the protection of freshwater aquatic life. The toxicity of elutriate waters, as measured by a 48-hour bioassay with Ceriodaphnia dubia, was low.

Can sediments at hydrocarbon seep sites represent a source for marine bioavailable iron? — A case study from the South China Sea

NASA Astrophysics Data System (ADS)

Li, N.; Feng, D.; Chen, D.

2017-12-01

Niu Li1, Dong Feng1,2, and Duofu Chen2,31CAS Key Laboratory of Ocean and Marginal Sea Geology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China. 2Laboratory for Marine Geology, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266061, China. 3Hadal Science and Technology Research Center, College of Marine Sciences, Shanghai Ocean University, Shanghai 201306, China. Iron is an essential micronutrient and commonly considered to be one of the key-limiting factors for biological productivity in many ocean regions. Seafloor Fe supply should be most efficient in suboxic conditions. Recent studies shown that widely spread anoxic environments can develop in hydrocarbon seep sediment and local bottom water, owing to the occurrence of aerobic and/or anaerobic methane oxidation. Under this condition, the iron in sediment can be reduced to dissolved Fe2+ in the ocean. However, questions remain about whether the hydrocarbon seep sediment can represent a source for bioavailable iron to the ocean, and the control factor for the transformation of iron in the sediment remains largely unexplored. For a number of hydrocarbon seeps from the northern and southern South China Sea, the iron speciation, pyrite sulfur isotope, and iron isotope, as well as the major and trace elements are used to constrain the intensity of cold seep, and its impact on transformation of iron in sediment. Samples from both areas show sediment iron lost during the high methane flux conditions, owing to the suboxic conditions cause by aerobic methane oxidation. On the other hand, high sediment iron content accompanied by high sulfur content can be seen during the conditions of high methane flux without the occurrence of aerobic methane oxidation, which is possible ascribed to the anaerobic methane oxidation and the release of iron through seep activity. This study reveals the transformation of iron in the sediment is closely related to the methane flux and the hydrocarbon seep sediment can represent a source for bioavailable iron to the ocean. Acknowledgments: Funding was provided by the NSF of China (Grants: 41422602 and 41373085).

Novel MixSIAR fingerprint model implementation in a Mediterranean mountain catchment

NASA Astrophysics Data System (ADS)

Lizaga, Ivan; Gaspar, Leticia; Blake, William; Palazón, Leticia; Quijano, Laura; Navas, Ana

2017-04-01

Increased sediment erosion levels can lead to degraded water and food quality, reduced aquatic biodiversity, decrease reservoir capacity and restrict recreational usage but determining soil redistribution and sediment budgets in watersheds is often challenging. One of the methods for making such determinations applies sediment fingerprinting methods by using sediment properties. The fingerprinting procedure tests a range of source material tracer properties to select a subset that can discriminate between the different potential sediment sources. The present study aims to test the feasibility of geochemical and radioisotopic fingerprint properties to apportion sediment sources within the Barués catchment. For this purpose, the new MixSIAR unmixing model was implemented as statistical tool. A total of 98 soil samples from different land cover sources (Mediterranean forest, pine forest scrubland, agricultural and subsoil) were collected in the Barués catchment (23 km2). This new approach divides the catchment into six different sub-catchments to evaluate how the sediment provenance varies along the river and the percentage of its sources and not only the contribution at the end. For this purpose, target sediments were collected at the end of each sub-catchment to introduce the variation along the entire catchment. Geochemistry and radioisotopic activity were analyzed for each sample and introduced as input parameters in the model. Percentage values from the five sources were different along the different subcatchments and the variations of all of them are summarized at the final target sample located at the end of the catchment. This work represents a good approximation to the fine sediment provenance in Mediterranean agricultural catchments and has the potential to be used for water resource control and future soil management. Identifying sediment contribution from different land uses offers considerable potential to prevent environmental degradation and the decrease in food production and quality.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Holliday, V.; Parks, J.M.

The turtle grass (Thalassia testudinum) community has a significant influence on sedimentation in Florida Bay, but the roles other processes may play in the buildup of mud bank and spit sediments are poorly understood. Samples from cores taken from Ramshorn Spit and Ramshorn Shoal were classified into 4 basic types on the basis of particle size distribution, organic content, and faunal assemblages. In order of increasing volumetric importance they are: (1) very thin, discontinuous shelly packstones, representing overbank or storm deposits; (2) thin, continuous basal shelly packstones, the initial marine deposit on the Pleistocene bedrock surface; (3) muddy wackestones, ofmore » variable thickness, deposited in the presence of a seagrass community; (4) very thick, faintly laminated fine mudstones, with very sparse fauna, representing weak current-transported sediments settling out of suspension. Discriminant function analysis confirms the classifications and shows that these sediment layers are indeed correlatable between cores. Interpretation of the core logs from Ramshorn Spit indicates a definite change in stratigraphy southwestward from the spit and bank junction to the tip of the spit itself. The different sediment layers show a small but significant inclination to the southwest. Throughout its depositional history, Ramshorn Spit seems to have been actively accreting outward into the surrounding lake by means of a current-transported fine mud fraction. After settling out at the growing tip of the spit, the sediments are subsequently stabilized at some later time by a turtle-grass cover.« less

Concentrations of organic contaminants in mollusks and sediments at NOAA National Status and Trend sites in the coastal and estuarine United States.

PubMed

O'Connor, T P

1991-01-01

Mean concentrations of PAHs, PCBs, and DDT in mollusks and sediments at sites in the National Status and Trends Program (NST) are distributed in log-normal fashion. The dry weight-based chlorinated organic concentrations in mollusks generally exceed those in nearby sediments by an order of magnitude. PAHs are found at similar concentrations in sediments and mollusks. Highest concentrations of PCBs and DDT in mollusks are in the ranges of 1000 to 4000 ng/g (dry) and 400 to 1000 ng/g (dry), respectively. The highest PAH concentrations in sediments are in the 10,000 to 50,000 ng/g (dry) range. While higher concentrations of contaminants can be found by sampling localized hot spots, the NST data represent the distribution of concentrations over general areas of the coastal United States.

Evidence for Early Pleistocene Glaciation obtained from borecores collected in East-Central Alberta, Canada

NASA Astrophysics Data System (ADS)

Barendregt, R. W.; Andriashek, L. D.; Jackson, L. E.

2014-12-01

Borecores collected from the east-central region of Alberta, Canada have recently been sub-sampled and studied for paleomagnetic remanence characteristics. A preliminary magnetostratigraphy has been established for sediments previously assumed to represent multiple continental (Laurentide) glaciations, but for which no geochronology was available for the pre-late Wisconsin units. Comprised primarily of tills and lesser thicknesses of interbedded glacio-lacustrine and outwash sediments, the record is extensive, reaching to thicknesses of 300 metres within buried valleys. Most of the sampled units are not accessible from outcrop, and their sedimentology and stratigraphy is derived from core data only. The lowermost tills are reversely magnetized in the majority of borecores sampled to date. These tills are underlain by Empress Formation sediments and/or Colorado Group shales, and overlain by normally magnetized sediments. Both tills contain substantial weathering horizons at their surface, suggesting that interglacial or nonglacial conditions persisted for some time after each period of till deposition. Whether these tills represent a single Early Pleistocene glaciation, or perhaps two, will require additional borecore measurements. This new record of Early Pleistocene glaciation(s) in east-central Alberta places the westernmost extent of earliest Laurentide ice some 300 km farther westward from its previously established limit in the Saskatoon to Regina region of the western Canadian prairies, but still well short of the all-time limit and elevation reached during the Late Wisconsin (Late Pleistocene) in the foothills of the Alberta and Montana Rocky Mountains. Key Words: East-Central Alberta glacial history, Early Pleistocene (Laurentide) glaciation, till magnetostratigraphy, Quaternary history of Western Canadian Prairies, continental glaciations of North America.

Trace element, semivolatile organic, and chlorinated organic compound concentrations in bed sediments of selected streams at Fort Gordon, Georgia, February-April 2010

USGS Publications Warehouse

Thomas, Lashun K.; Journey, Celeste A.; Stringfield, Whitney J.; Clark, Jimmy M.; Bradley, Paul M.; Wellborn, John B.; Ratliff, Hagan; Abrahamsen, Thomas A.

2011-01-01

A spatial survey of streams was conducted from February to April 2010 to assess the concentrations of major ions, selected trace elements, semivolatile organic compounds, organochlorine pesticides, and polychlorinated biphenyls associated with the bed sediments of surface waters at Fort Gordon military installation near Augusta, Georgia. This investigation expanded a previous study conducted in May 1998 by the U.S. Geological Survey, in cooperation with the U.S. Department of the Army Environmental and Natural Resources Management Office of the U.S. Army Signal Center and Fort Gordon, that evaluated the streambed sediment quality of selected surface waters at Fort Gordon. The data presented in this report are intended to help evaluate bed sediment quality in relation to guidelines for the protection of aquatic life, and identify temporal trends in trace elements and semivolatile organic compound concentrations at streambed sites previously sampled. Concentrations of 34 major ions and trace elements and 102 semivolatile organic, organochlorine pesticide, and polychlorinated biphenyl compounds were determined in the fine-grained fraction of bed sediment samples collected from 13 of the original 29 sites in the previous study, and 22 additional sites at Fort Gordon. Three of the sites were considered reference sites as they were presumed to be located away from potential sources of contaminants and were selected to represent surface waters flowing onto the fort, and the remaining 32 nonreference sites were presumed to be located within the contamination area at the fort. Temporal trends in trace elements and semivolatile organic compound concentrations also were evaluated at 13 of the 32 nonreference sites to provide an assessment of the variability in the number of detections and concentrations of constituents in bed sediment associated with potential sources, accumulation, and attenuation processes. Major ion and trace element concentrations in fine-grained bed sediment samples from most nonreference sites exceeded concentrations in samples from reference sites at Fort Gordon. Bed sediments from one of the nonreference sites sampled contained the highest concentrations of copper and lead with elevated levels of zinc and chromium relative to reference sites. The percentage change of major ions, trace elements, and total organic carbon that had been detected at sites previously sampled in May 1998 and current bed sediment sites ranged from -4 to 8 percent with an average percentage change of less than 1 percent. Concentrations of major ions and trace elements in bed sediments exceeded probable effect levels for aquatic life (based on the amphipod Hyalella azteca) established by the U.S. Environmental Protection Agency at 46 and 69 percent of the current and previously sampled locations, respectively. The greatest frequency of exceedances for major ions and trace elements in bed sediments was observed for lead. Concentrations of semivolatile organic compounds, organochlorine pesticides, and polychlorinated biphenyls were detected in bed sediment samples at 94 percent of the sites currently sampled. Detections of these organic compounds were reported with greater frequency in bed sediments at upstream sampling locations, when compared to downstream locations. The greatest number of detections of these compounds was reported for bed sediment samples collected from two creeks above a lake. The percentage change of semivolatile organic compounds detected at previously sampled and current bed sediment sites ranged from -68 to 100 percent with the greatest percentage increase reported for one of the creeks above the lake. Concentrations of semivolatile organic compounds and polychlorinated biphenyls in bed sediments exceeded aquatic life criteria established by the U.S. Environmental Protection Agency at three sites. Contaminant compounds exceeding aquatic life criteria included fluoranthene, phenanthrene, anthracene, benzo(a)anthracene

Background radioactivity in sediments near Los Alamos, New Mexico.

PubMed

McLin, Stephen G

2004-07-26

River and reservoir sediments have been collected annually by Los Alamos National Laboratory since 1974 and 1979, respectively. These background samples are collected from five river stations and four reservoirs located throughout northern New Mexico and southern Colorado. Analyses include 3H, 90Sr, 137Cs, total U, 238Pu, 239,240Pu, 241Am, gross alpha, gross beta, and gross gamma radioactivity. Surprisingly, there are no federal or state regulatory standards in the USA that specify how to compute background radioactivity values on sediments. Hence, the sample median (or 0.50 quantile) is proposed for this background because it reflects central data tendency and is distribution-free. Estimates for the upper limit of background radioactivity on river and reservoir sediments are made for sampled analytes using the 0.95 quantile (two-tail). These analyses also show that seven of ten analytes from reservoir sediments are normally distributed, or are normally distributed after a logarithmic or square root transformation. However, only three of ten analytes from river sediments are similarly distributed. In addition, isotope ratios for 137Cs/238Pu, 137Cs/239,240Pu, and 239,240Pu/238Pu from reservoir sediments are independent of clay content, total organic carbon/specific surface area (TOC/SSA) and cation exchange capacity/specific surface area (CEC/SSA) ratios. These TOC/SSA and CEC/SSA ratios reflect sediment organic carbon and surface charge densities that are associated with radionuclide absorption, adsorption, and ion exchange reactions on clay mineral structures. These latter ratio values greatly exceed the availability of background radionuclides in the environment, and insure that measured background levels are a maximum. Since finer-grained reservoir sediments contain larger clay-sized fractions compared to coarser river sediments, they show higher background levels for most analytes. Furthermore, radioactivity values on reservoir sediments have remained relatively constant since the early 1980s. These results suggest that clay contents in terrestrial sediments are often more important at concentrating background radionuclides than many other environmental factors, including geology, climate and vegetation. Hence, reservoirs and floodplains represent ideal radionuclide sampling locations because fine-grained materials are more easily trapped here. Ultimately, most of these differences still reflect spatial and temporal variability originating from global atmospheric nuclear weapons testing and disintegration of nuclear-powered satellites upon atmospheric reentry. Copyright 2004 Elsevier B.V.

Mercury pollution in Doha (Qatar) coastal environment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Al-Madfa, H.; Dahab, O.A.; Holail, H.

Surface water and sediment samples were collected from the Doha coastal area and analyzed for content of physico-chemical forms of mercury. Dissolved reactive Hg represented 81.0% of the total dissolved Hg. Organic Hg contributed only 5.0% of total Hg. Mercury showed a strong tendency to be associated with suspended matter in Doha coastal waters, as it represented about 73.0% of the total. Total Hg in bulk Doha surface sediments fluctuated between 0.14 and 1.75 [mu]g g[sup [minus]1] dry weight, with an average of 0.54 [+-] 0.46 [mu]g g[sup [minus]1] dry weight. The sediment fraction past 63 [mu]m contained 0.73 [+-]more » 0.60 [mu]g g[sup [minus]1] dry weight total Hg. Leachable and methyl Hg averaged 0.10 [+-] 0.11 and 0.02 [+-] 0.03 [mu]g g[sup [minus]1] dry weight, respectively, in the < 63-[mu]m sediment fraction. There is a general trend for all Hg species determined in water and sediments to decrease seaward. The significantly elevated Hg levels at certain locations indicated that the main Hg sources to Doha coastal environment are leachate from the solid waste disposal site, the two harbors, and surface-water discharge.« less

Geomicrobiology of High-Level Nuclear Waste-Contaminated Vadose Sediments at the Hanford Site, Washington State

PubMed Central

Fredrickson, James K.; Zachara, John M.; Balkwill, David L.; Kennedy, David; Li, Shu-mei W.; Kostandarithes, Heather M.; Daly, Michael J.; Romine, Margaret F.; Brockman, Fred J.

2004-01-01

Sediments from a high-level nuclear waste plume were collected as part of investigations to evaluate the potential fate and migration of contaminants in the subsurface. The plume originated from a leak that occurred in 1962 from a waste tank consisting of high concentrations of alkali, nitrate, aluminate, Cr(VI), 137Cs, and 99Tc. Investigations were initiated to determine the distribution of viable microorganisms in the vadose sediment samples, probe the phylogeny of cultivated and uncultivated members, and evaluate the ability of the cultivated organisms to survive acute doses of ionizing radiation. The populations of viable aerobic heterotrophic bacteria were generally low, from below detection to ∼104 CFU g−1, but viable microorganisms were recovered from 11 of 16 samples, including several of the most radioactive ones (e.g., >10 μCi of 137Cs/g). The isolates from the contaminated sediments and clone libraries from sediment DNA extracts were dominated by members related to known gram-positive bacteria. Gram-positive bacteria most closely related to Arthrobacter species were the most common isolates among all samples, but other phyla high in G+C content were also represented, including Rhodococcus and Nocardia. Two isolates from the second-most radioactive sample (>20 μCi of 137Cs g−1) were closely related to Deinococcus radiodurans and were able to survive acute doses of ionizing radiation approaching 20 kGy. Many of the gram-positive isolates were resistant to lower levels of gamma radiation. These results demonstrate that gram-positive bacteria, predominantly from phyla high in G+C content, are indigenous to Hanford vadose sediments and that some are effective at surviving the extreme physical and chemical stress associated with radioactive waste. PMID:15240306

An Improved Quantitative Real-Time PCR Assay for the Enumeration of Heterosigma akashiwo (Raphidophyceae) Cysts Using a DNA Debris Removal Method and a Cyst-Based Standard Curve.

PubMed

Kim, Joo-Hwan; Kim, Jin Ho; Wang, Pengbin; Park, Bum Soo; Han, Myung-Soo

2016-01-01

The identification and quantification of Heterosigma akashiwo cysts in sediments by light microscopy can be difficult due to the small size and morphology of the cysts, which are often indistinguishable from those of other types of algae. Quantitative real-time PCR (qPCR) based assays represent a potentially efficient method for quantifying the abundance of H. akashiwo cysts, although standard curves must be based on cyst DNA rather than on vegetative cell DNA due to differences in gene copy number and DNA extraction yield between these two cell types. Furthermore, qPCR on sediment samples can be complicated by the presence of extracellular DNA debris. To solve these problems, we constructed a cyst-based standard curve and developed a simple method for removing DNA debris from sediment samples. This cyst-based standard curve was compared with a standard curve based on vegetative cells, as vegetative cells may have twice the gene copy number of cysts. To remove DNA debris from the sediment, we developed a simple method involving dilution with distilled water and heating at 75°C. A total of 18 sediment samples were used to evaluate this method. Cyst abundance determined using the qPCR assay without DNA debris removal yielded results up to 51-fold greater than with direct counting. By contrast, a highly significant correlation was observed between cyst abundance determined by direct counting and the qPCR assay in conjunction with DNA debris removal (r2 = 0.72, slope = 1.07, p < 0.001). Therefore, this improved qPCR method should be a powerful tool for the accurate quantification of H. akashiwo cysts in sediment samples.

Source-to-Sink Methods by Hyperspectral Imaging: a Case Study of the Laminated Sediments of Lake Linné (Svalbard).

NASA Astrophysics Data System (ADS)

Van Exem, A.; Debret, M.; Copard, Y.; Verpoorter, C.; Sorrel, P.; de Wet, G.; Werner, A.; Roof, S.; Laignel, B.; Retelle, M.

2016-12-01

Laminated sediments contained valuable information recorded on a micrometric scale. Information about sediments flux and origins require high-resolution source tracking analysis. Quick and non-destructive, hyperspectral imaging provides contiguous reflectance datasets into 2 dimensions with a spatial resolution of 0.02 mm. Located on the west of the Spitzbergen, Lake Linné is the largest lake in the region. Erosion is mainly driven by glacier fluctuations and three different bedrocks are potential sediment sources. Organic matter (coal) is only found in some carboniferous rocks. Four cores recovered from different parts of the lake contain millimeter scale laminae. Two approaches were compared: (i) measurement of statistical correlations between the sediments and source samples, (ii) extraction of extreme spectral signatures from the VNIR hyperspectral images. Total Organic Carbon (TOC) values of all samples were also given by bulk geochemistry (RE6 ® pyrolyzer). Consequently, the measured similarity between the hyperspectral image and the field samples illustrates the sources contribution within the core. Three sample clusters and three equivalent spectral signatures were found. TOC values from the archive show good correlation (r=0.86, p<0.001, n=73) with the hyperspectral signature relative to TOC content. A least-squares regression (r²=0.74) was used to extrapolate TOC values in order to represent their distribution at 0.02 mm resolution. This is the first source-to-sink study based on imaging spectroscopy. Our results indicate that hyperspectral imagery is a useful tool to (i) identify sediment sources, (ii) perform continuous paleo-environmental reconstruction at high resolution, and (iii) can provide quantitative results (TOC values) validated by destructive analyses.

Arsenic partitioning among particle-size fractions of mine wastes and stream sediments from cinnabar mining districts.

PubMed

Silva, Veronica; Loredo, Jorge; Fernández-Martínez, Rodolfo; Larios, Raquel; Ordóñez, Almudena; Gómez, Belén; Rucandio, Isabel

2014-10-01

Tailings from abandoned mercury mines represent an important pollution source by metals and metalloids. Mercury mining in Asturias (north-western Spain) has been carried out since Roman times until the 1970s. Specific and non-specific arsenic minerals are present in the paragenesis of the Hg ore deposit. As a result of intensive mining operations, waste materials contain high concentrations of As, which can be geochemically dispersed throughout surrounding areas. Arsenic accumulation, mobility and availability in soils and sediments are strongly affected by the association of As with solid phases and granular size composition. The objective of this study was to examine phase associations of As in the fine grain size subsamples of mine wastes (La Soterraña mine site) and stream sediments heavily affected by acid mine drainage (Los Rueldos mine site). An arsenic-selective sequential procedure, which categorizes As content into seven phase associations, was applied. In spite of a higher As accumulation in the finest particle-size subsamples, As fractionation did not seem to depend on grain size since similar distribution profiles were obtained for the studied granulometric fractions. The presence of As was relatively low in the most mobile forms in both sites. As was predominantly linked to short-range ordered Fe oxyhydroxides, coprecipitated with Fe and partially with Al oxyhydroxides and associated with structural material in mine waste samples. As incorporated into short-range ordered Fe oxyhydroxides was the predominant fraction at sediment samples, representing more than 80% of total As.

Sequential extraction protocol for organic matter from soils and sediments using high resolution mass spectrometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tfaily, Malak M.; Chu, Rosalie K.; Toyoda, Jason

A vast number of organic compounds are present in soil organic matter (SOM) and play an important role in the terrestrial carbon cycle, facilitate interactions between organisms, and represent a sink for atmospheric CO2. The diversity of different SOM compounds and their molecular characteristics is a function of the organic source material and biogeochemical history. By understanding how SOM composition changes with sources and the processes by which it is biogeochemically altered in different terrestrial ecosystems, it may be possible to predict nutrient and carbon cycling, response to system perturbations, and impact of climate change will have on SOM composition.more » In this study, a sequential chemical extraction procedure was developed to reveal the diversity of organic matter (OM) in different ecosystems and was compared to the previously published protocol using parallel solvent extraction (PSE). We compared six extraction methods using three sample types, peat soil, spruce forest soil and river sediment, so as to select the best method for extracting a representative fraction of organic matter from soils and sediments from a wide range of ecosystems. We estimated the extraction yield of dissolved organic carbon (DOC) by total organic carbon analysis, and measured the composition of extracted OM using high resolution mass spectrometry. This study showed that OM composition depends primarily on soil and sediment characteristics. Two sequential extraction protocols, progressing from polar to non-polar solvents, were found to provide the highest number and diversity of organic compounds extracted from the soil and sediments. Water (H2O) is the first solvent used for both protocols followed by either co-extraction with methanol-chloroform (MeOH-CHCl3) mixture, or acetonitrile (ACN) and CHCl3 sequentially. The sequential extraction protocol developed in this study offers improved sensitivity, and requires less sample compared to the PSE workflow where a new sample is used for each solvent type. Furthermore, a comparison of SOM composition from the different sample types revealed that our sequential protocol allows for ecosystem comparisons based on the diversity of compounds present, which in turn could provide new insights about source and processing of organic compounds in different soil and sediment types.« less

Sequential extraction protocol for organic matter from soils and sediments using high resolution mass spectrometry.

PubMed

Tfaily, Malak M; Chu, Rosalie K; Toyoda, Jason; Tolić, Nikola; Robinson, Errol W; Paša-Tolić, Ljiljana; Hess, Nancy J

2017-06-15

A vast number of organic compounds are present in soil organic matter (SOM) and play an important role in the terrestrial carbon cycle, facilitate interactions between organisms, and represent a sink for atmospheric CO 2 . The diversity of different SOM compounds and their molecular characteristics is a function of the organic source material and biogeochemical history. By understanding how SOM composition changes with sources and the processes by which it is biogeochemically altered in different terrestrial ecosystems, it may be possible to predict nutrient and carbon cycling, response to system perturbations, and impact of climate change will have on SOM composition. In this study, a sequential chemical extraction procedure was developed to reveal the diversity of organic matter (OM) in different ecosystems and was compared to the previously published protocol using parallel solvent extraction (PSE). We compared six extraction methods using three sample types, peat soil, spruce forest soil and river sediment, so as to select the best method for extracting a representative fraction of organic matter from soils and sediments from a wide range of ecosystems. We estimated the extraction yield of dissolved organic carbon (DOC) by total organic carbon analysis, and measured the composition of extracted OM using high resolution mass spectrometry. This study showed that OM composition depends primarily on soil and sediment characteristics. Two sequential extraction protocols, progressing from polar to non-polar solvents, were found to provide the highest number and diversity of organic compounds extracted from the soil and sediments. Water (H 2 O) is the first solvent used for both protocols followed by either co-extraction with methanol-chloroform (MeOH-CHCl 3 ) mixture, or acetonitrile (ACN) and CHCl 3 sequentially. The sequential extraction protocol developed in this study offers improved sensitivity, and requires less sample compared to the PSE workflow where a new sample is used for each solvent type. Furthermore, a comparison of SOM composition from the different sample types revealed that our sequential protocol allows for ecosystem comparisons based on the diversity of compounds present, which in turn could provide new insights about source and processing of organic compounds in different soil and sediment types. Copyright © 2017 Elsevier B.V. All rights reserved.

High-throughput characterization of sediment organic matter by pyrolysis-gas chromatography/mass spectrometry and multivariate curve resolution: A promising analytical tool in (paleo)limnology.

PubMed

Tolu, Julie; Gerber, Lorenz; Boily, Jean-François; Bindler, Richard

2015-06-23

Molecular-level chemical information about organic matter (OM) in sediments helps to establish the sources of OM and the prevalent degradation/diagenetic processes, both essential for understanding the cycling of carbon (C) and of the elements associated with OM (toxic trace metals and nutrients) in lake ecosystems. Ideally, analytical methods for characterizing OM should allow high sample throughput, consume small amounts of sample and yield relevant chemical information, which are essential for multidisciplinary, high-temporal resolution and/or large spatial scale investigations. We have developed a high-throughput analytical method based on pyrolysis-gas chromatography/mass spectrometry and automated data processing to characterize sedimentary OM in sediments. Our method consumes 200 μg of freeze-dried and ground sediment sample. Pyrolysis was performed at 450°C, which was found to avoid degradation of specific biomarkers (e.g., lignin compounds, fresh carbohydrates/cellulose) compared to 650°C, which is in the range of temperatures commonly applied for environmental samples. The optimization was conducted using the top ten sediment samples of an annually resolved sediment record (containing 16-18% and 1.3-1.9% of total carbon and nitrogen, respectively). Several hundred pyrolytic compound peaks were detected of which over 200 were identified, which represent different classes of organic compounds (i.e., n-alkanes, n-alkenes, 2-ketones, carboxylic acids, carbohydrates, proteins, other N compounds, (methoxy)phenols, (poly)aromatics, chlorophyll and steroids/hopanoids). Technical reproducibility measured as relative standard deviation of the identified peaks in triplicate analyses was 5.5±4.3%, with 90% of the RSD values within 10% and 98% within 15%. Finally, a multivariate calibration model was calculated between the pyrolytic degradation compounds and the sediment depth (i.e., sediment age), which is a function of degradation processes and changes in OM source type. This allowed validation of the Py-GC/MS dataset against fundamental processes involved in OM cycling in aquatic ecosystems. Copyright © 2015 Elsevier B.V. All rights reserved.

Sediment source fingerprinting as an aid to catchment management: A review of the current state of knowledge and a methodological decision-tree for end-users

USGS Publications Warehouse

Collins, A.L; Pulley, S.; Foster, I.D.L; Gellis, Allen; Porto, P.; Horowitz, A.J.

2017-01-01

The growing awareness of the environmental significance of fine-grained sediment fluxes through catchment systems continues to underscore the need for reliable information on the principal sources of this material. Source estimates are difficult to obtain using traditional monitoring techniques, but sediment source fingerprinting or tracing procedures, have emerged as a potentially valuable alternative. Despite the rapidly increasing numbers of studies reporting the use of sediment source fingerprinting, several key challenges and uncertainties continue to hamper consensus among the international scientific community on key components of the existing methodological procedures. Accordingly, this contribution reviews and presents recent developments for several key aspects of fingerprinting, namely: sediment source classification, catchment source and target sediment sampling, tracer selection, grain size issues, tracer conservatism, source apportionment modelling, and assessment of source predictions using artificial mixtures. Finally, a decision-tree representing the current state of knowledge is presented, to guide end-users in applying the fingerprinting approach.

Potential bioavailability assessment, source apportionment and ecological risk of heavy metals in the sediment of Brisbane River estuary, Australia.

PubMed

Duodu, Godfred Odame; Goonetilleke, Ashantha; Ayoko, Godwin A

2017-04-15

A weak acid extraction was used to mobilize the loosely bound metals in estuary sediment samples. More than 30% of Ag, As, Ca, Cd, Co, Cu, Hg, Mn Ni, Pb and Zn were leached from the sediment showing that these metals are significantly present in the bioavailable form. PCA/APCS identified three sources of the metals, namely: lithogenic accounting for 72%, shipping related contributing 15% and traffic related representing 13% of the total load. Application of pollution index (PI) and modified pollution index (MPI) revealed that the sediment range from unpolluted to heavily polluted while ecological risk index (RI) classifies the sediment as posing low ecological risk modified ecological risk index (MRI) suggests considerable to very high ecological risk. To provide holistic insights into the ecological risks posed by metals, enrichment factor, MPI and MRI are recommended for the assessment of sediment in complex environments such as estuaries. Copyright © 2017 Elsevier Ltd. All rights reserved.

Laboratory electrical resistivity analysis of geologic samples from Fort Irwin, California: Chapter E in Geology and geophysics applied to groundwater hydrology at Fort Irwin, California

USGS Publications Warehouse

Bloss, Benjamin R.; Bedrosian, Paul A.; Buesch, David C.

2015-01-01

Correlating laboratory resistivity measurements with geophysical resistivity models helps constrain these models to the geology and lithology of an area. Throughout the Fort Irwin National Training Center area, 111 samples from both cored boreholes and surface outcrops were collected and processed for laboratory measurements. These samples represent various lithologic types that include plutonic and metamorphic (basement) rocks, lava flows, consolidated sedimentary rocks, and unconsolidated sedimentary deposits that formed in a series of intermountain basins. Basement rocks, lava flows, and some lithified tuffs are generally resistive (≥100 ohm-meters [Ω·m]) when saturated. Saturated unconsolidated samples are moderately conductive to conductive, with resistivities generally less than 100 Ω·m, and many of these samples are less than 50 Ω·m. The unconsolidated samples can further be separated into two broad groups: (1) younger sediments that are moderately conductive, owing to their limited clay content, and (2) older, more conductive sediments with a higher clay content that reflects substantial amounts of originally glassy volcanic ash subsequently altered to clay. The older sediments are believed to be Tertiary. Time-domain electromagnetic (TEM) data were acquired near most of the boreholes, and, on the whole, close agreements between laboratory measurements and resistivity models were found. 

Seabed roughness parameters from joint backscatter and reflection inversion at the Malta Plateau.

PubMed

Steininger, Gavin; Holland, Charles W; Dosso, Stan E; Dettmer, Jan

2013-09-01

This paper presents estimates of seabed roughness and geoacoustic parameters and uncertainties on the Malta Plateau, Mediterranean Sea, by joint Bayesian inversion of mono-static backscatter and spherical wave reflection-coefficient data. The data are modeled using homogeneous fluid sediment layers overlying an elastic basement. The scattering model assumes a randomly rough water-sediment interface with a von Karman roughness power spectrum. Scattering and reflection data are inverted simultaneously using a population of interacting Markov chains to sample roughness and geoacoustic parameters as well as residual error parameters. Trans-dimensional sampling is applied to treat the number of sediment layers and the order (zeroth or first) of an autoregressive error model (to represent potential residual correlation) as unknowns. Results are considered in terms of marginal posterior probability profiles and distributions, which quantify the effective data information content to resolve scattering/geoacoustic structure. Results indicate well-defined scattering (roughness) parameters in good agreement with existing measurements, and a multi-layer sediment profile over a high-speed (elastic) basement, consistent with independent knowledge of sand layers over limestone.

Carbon-13 natural abundance signatures of long-chain fatty acids to determinate sediment origin: A case study in northeast Austria

NASA Astrophysics Data System (ADS)

Mabit, Lionel; Gibbs, Max; Meusburger, Katrin; Toloza, Arsenio; Resch, Christian; Klik, Andreas; Swales, Andrew; Alewell, Christine

2016-04-01

- Several recently published information from scientific research have highlighted that compound-specific stable isotope (CSSI) signatures of fatty acids (FAs) based on the measurement of carbon-13 natural abundance signatures showed great promises to identify sediment origin. The authors have used this innovative isotopic approach to investigate the sources of sediment in a three hectares Austrian sub-watershed (i.e. Mistelbach). Through a previous study using the Cs-137 technique, Mabit et al. (Geoderma, 2009) reported a local maximum sedimentation rate reaching 20 to 50 t/ha/yr in the lowest part of this watershed. However, this study did not identify the sources. Subsequently, the deposited sediment at its outlet (i.e. the sediment mixture) and representative soil samples from the four main agricultural fields - expected to be the source soils - of the site were investigated. The bulk delta carbon-13 of the samples and two long-chain FAs (i.e. C22:0 and C24:0) allowed the best statistical discrimination. Using two different mixing models (i.e. IsoSource and CSSIAR v1.00) and the organic carbon content of the soil sources and sediment mixture, the contribution of each source has been established. Results suggested that the grassed waterway contributed to at least 50% of the sediment deposited at the watershed outlet. This study, that will require further validation, highlights that CSSI and Cs-137 techniques are complementary as fingerprints and tracers for establishing land sediment redistribution and could provide meaningful information for optimized decision-making by land managers.

Trace elements in lake sediments measured by the PIXE technique

NASA Astrophysics Data System (ADS)

Gatti, Luciana V.; Mozeto, Antônio A.; Artaxo, Paulo

1999-04-01

Lakes are ecosystems where there is a great potential of metal accumulation in sediments due to their depositional characteristics. Total concentration of trace elements was measured on a 50 cm long sediment core from the Infernão Lake, that is an oxbow lake of the Moji-Guaçu River basin, in the state of São Paulo, Brazil. Dating of the core shows up to 180 yrs old sediment layers. The use of the PIXE technique for elemental analysis avoids the traditional acid digestion procedure common in other techniques. The multielemental characteristic of PIXE allows a simultaneous determination of about 20 elements in the sediment samples, such as, Al, Si, P, S, Cl, K, Ca, Ti, V, Cr, Mn, Fe, Ni, Cu, Zn, Rb, Sr, Zr, Ba, and Pb. Average values for the elemental composition were found to be similar to the bulk crustal composition. The lake flooding pattern strongly influences the time series of the elemental profiles. Factor analysis of the elemental variability shows five factors. Two of the factors represent the mineralogical matrix, and others represent the organic component, a factor with lead, and another loaded with chromium. The mineralogical component consists of elements such as, Fe, Al, V, Ti, Mn, Ni, K, Zr, Sr, Cu and Zn. The variability of Si is explained by two distinct factors, because it is influenced by two different sources, aluminum-silicates and quartz, and the effect of inundation are different for each other. The organic matter is strongly associated with calcium, and also bounded with S, Zn, Cu and P. Lead and chromium appears as separated factors, although it is not clear the evidences for their anthropogenic origin. The techniques developed for sample preparation and PIXE analysis was proven as advantageous and provided very good reproducibility and accuracy.

DDT residue contamination in sediments from Lake Sibaya in northern KwaZulu-Natal, South Africa: implications for conservation in a World Heritage Site.

PubMed

Humphries, Marc S

2013-11-01

Maputaland in northern KwaZulu-Natal is a biodiversity hotspot and host to a number of ecologically important systems, including Lake Sibaya, southern Africa's largest natural freshwater lake. The region is malaria endemic and this study reports the presence of DDT and its metabolites in the sediments of Lake Sibaya that have resulted from the widespread and continued use of DDT in the region. DDT residues (p,p'-DDT, p,p'-DDD, and p,p'-DDE) were detected at all 11 sites sampled, with total concentrations ranging from 0.8 to 123 ng g(-1). Total DDT concentrations at Lake Sibaya represent some of the highest levels reported in South Africa, with most samples exceeding sediment quality guideline values. The findings from this study raise concerns and indicate that urgent further work is needed to investigate the potential for bioaccumulation, which could adversely affect breeding fish, bird, and crocodile populations in the region. While this study represents the first report on DDT contamination in Lake Sibaya, results have important implications for a number of other aquatic ecosystems within the Maputaland ecoregion, as well as the many local people who depend on them. Copyright © 2013 Elsevier Ltd. All rights reserved.

Non-seagrass meadow sedimentary facies of the Pontinian Islands, Tyrrhenian Sea: A modern example of mixed carbonate siliciclastic sedimentation

NASA Astrophysics Data System (ADS)

Brandano, Marco; Civitelli, Giacomo

2007-10-01

The soft bottom of the Mediterranean continental shelf is characterized by a heterozoan skeletal assemblage ( sensu [James, N.P., 1997. The cool-water carbonate depositional realm. In: James, N.P., Clarke, J. (Eds), Cool-water Carbonates. Spec. Publ. Soc. Sediment. Geol., vol. 56, pp.1-20.]). Although the contemporary presence of terrigenous and skeletal carbonate sediments has been well established [Tortora, P., 1996. Depositional and erosional coastal processes during the last postglacial sea-level rise: an example from the Central Tyrrhenian continental shelf (Italy). J. Sed. Res. 66, 391-405.; Fornós, J.J., Ahr, W.M., 1997. Temperate carbonates on a modern, low-energy, isolated ramp: the Balearic Platform, Spain. Journal of Sedimentary Research , 67, 364-373.; Fornós, J.J., Ahr, W.M., 2006. Present-day temperate carbonate sedimentation on the Balearic Platform, western Mediterranean: compositional and textural variation along a low-energy isolated ramp. In: Pedley, H.M., Carannante, G. (Eds.) 2006, Cool-water Carbonates: Depositional Systems and Palaeoenvironmental Controls. Geological Society, London, Special Publications, 255, pp. 121-135], the interactions between carbonate and terrigenous-siliciclastic sedimentation has not been documented well enough. A total of 33 surface sediment samples from the Pontinian shelf (Tyrrhenian Sea, central Mediterranean) have been analysed. Sampling stations range from 15 to 250 mwd (meter water depth) and are located along five transects (PonzaW, PonzaNW, Ponza NE, Ponza E, Zannone), plus four samples collected around Palmarola Island. Sectors colonized by seagrass meadows have not been sampled. A total of 6 sedimentary facies (F) and 10 microfacies (mf) have been recognized by using component analyses, grain size percentage, sorting, carbonate content and authigenic mineralization rate. These facies and microfacies represent the Pontian Islands shelf sedimentation, in the interval between the upper infralittoral and the epibathyal zones that represent shelf-break and upper slope sedimentation. The Maerl facies (F4a,b; mf4a,b) and the skeletal sands (F2a,b; mf2a1, mf2a2, mf2b) fall within the circalittoral zone. The circalittoral zone in the water depth interval between 82 m and 112 m display relict facies (F6, mf6). Finally facies F5 (Siliciclastic sands) includes subfacies F5b (mf5b), located in the circalittoral zone at depths of 49 to 101 mwd and restricted to the western and eastern sectors of Ponza, and subfacies F5a in the upper infralittoral zone (15 mwd/25 mwd) where erosional processes prevail. Carbonate content analyses indicate that maximum carbonate production on the Pontinian shelf took place in the 60-80 mwd interval. Facies F4 (Maerl) represents the environment characterized by the highest carbonate production rates. In the Pontian area siliciclastic-carbonate mixing took place in the infralittoral zone and in the lower circalittoral zone. In the infralittoral zone erosional processes on the rocky shoreline produced lithoclasts and vulcanoclastic deposits that were reworked by wave-induced near-shore currents. In the lower circalittoral zone the prolific production by photic biota (red algae) ends, while skeletal remains of the aphotic environment mixes with planktonic sediments characterized by low carbonate values. Sand (63 μm-2 mm) is the dominant grain size class, however gravel-dominated facies (F4 Maerl) are present in water depths (50 to 112 mwd) which are significantly below the storm wave base. Glauconite mineralization appears on the Pontinian shelf from 50 mwd and increases in abundance along the deeper bathymetries. The compositional characteristics of relict facies F6 shows the concurrence of biota assemblages of the infralittoral and circalittoral zones, likely representing the record of the last Holocene transgressive event (18 ky) and expressed by the overlapping of components of different environments.

Phase I Source Investigation, Heckathorn Superfund Site, Richmond, California

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kohn, Nancy P; Evans, Nathan R

This report represents Phase I of a multi-phase approach to a source investigation of DDT at the Heckathorn Superfund Site, Richmond, California, the former site of a pesticide packaging plant, and the adjacent waterway, the Lauritzen Channel. Potential identified sources of contamination were from sloughed material from undredged areas (such as side banks) and from outfall pipes. Objectives of Phase I included the (1) evaluation of pesticide concentrations associated with discharge from outfalls, (2) identification of additional outfalls in the area, (3) identification of type, quantity, and distribution of sediment under the Levin pier, (4) quantification of pesticide concentrations inmore » sediment under the pier, and (5) evaluation of sediment structure and slope stability under the pier. Field operations included the collection of sediment directly from inside the mouths of outfall pipes, when possible, or the deployment of specially designed particle traps where direct sampling was problematic. Passive water samplers were placed at the end of known outfall pipes and analyzed for DDT and other pesticides of concern. Underwater dive surveys were conducted beneath the Levin pier to document type, slope, and thickness of sediment. Samples were collected at locations of interest and analyzed for contaminants. Also sampled was soil from bank areas, which were suspected of potentially contributing to continued DDT contamination of the Lauritzen Channel through erosion and groundwater leaching. The Phase I Source Investigation was successful in identifying significant sources of DDT contamination to Lauritzen Channel sediment. Undredged sediment beneath the Levin pier that has been redistributed to the channel is a likely source. Two outfalls tested bear further investigation. Not as well-defined are the contributions of bank erosional material and groundwater leaching. Subsequent investigations will be based on the results of this first phase.« less

Comparability of suspended-sediment concentration and total suspended-solids data for two sites on the L'Anguille River, Arkansas, 2001 to 2003

USGS Publications Warehouse

Galloway, Joel M.; Evans, Dennis A.; Green, W. Reed

2005-01-01

Suspended-sediment concentration and total suspended solids data collected with automatic pumping samplers at the L'Anguille River near Colt and the L'Anguille River at Palestine, Arkansas, August 2001 to October 2003 were compared using ordinary least squares regression analyses to determine the relation between the two datasets for each of the two sites. The purpose of this report is to describe the suspended-sediment concentration and total suspended-solids data and examine the comparability of the two datasets for each site. Suspended-sediment concentration and total suspended solids data for the L'Anguille River varied spatially and temporally from August 2001 to October 2003. The site at the L'Anguille River at Palestine represents a larger portion of the L'Anguille River Basin than the site near Colt, and generally had higher median suspended-sediment concentration and total suspended solids and greater ranges in values. The differences between suspended-sediment concentration and total suspended solids data for the L'Anguille River near Colt appeared inversely related to streamflow and not related to time. The relation between suspended-sediment concentration and total suspended solids at the L'Anguille River at Palestine was more variable than at Colt and did not appear to have a relation with flow or time. The relation between suspended-sediment concentration and total suspended solids for the L'Anguille River near Colt shows that total suspended solids increased proportionally as suspended-sediment concentration increased. However, the relation between suspended-sediment concentration and total suspended solids for the L'Anguille River at Palestine showed total suspended solids increased less proportionally as suspended-sediment concentration increased compared to the L'Anguille River near Colt. Differences between the two analytical methods may partially explain differences between the suspended-sediment concentration and total suspended solids data at the two sites. Total suspended solids are analyzed by removing an aliquot of the original sample for further analysis, and suspended-sediment concentrations are analyzed using all sediment and the total mass of the sample. At the L'Anguille River at Palestine another source of variability in the two data sets could have been the location of the automatic pumping sampler intake. The intake was located at a point in the stream cross-section that was subject to sedimentation, which may have resulted in positive sample bias.

Occurrence and Trends of Selected Chemical Constituents in Bottom Sediment, Grand Lake O' the Cherokees, Northeast Oklahoma, 1940-2008

USGS Publications Warehouse

Juracek, Kyle E.; Becker, Mark F.

2009-01-01

After over 100 years of continuous activity, lead and zinc mining in the Tri-State Mining District (hereafter referred to as the TSMD) in parts of southeast Kansas, southwest Missouri, and northeast Oklahoma ended in the 1970s. The mining activity resulted in substantial historical and ongoing input of cadmium, lead, and zinc to the environment including Grand Lake O' the Cherokees (hereafter referred to as Grand Lake), a large reservoir in northeast Oklahoma. To help determine the extent and magnitude of contamination in Grand Lake, a one-year study was conducted by the U.S. Geological Survey in cooperation with the U.S. Fish and Wildlife Service. Bottom-sediment coring at five sites was used to investigate the occurrence of cadmium, lead, zinc, and other selected constituents in the bottom sediment of Grand Lake. Cadmium concentrations in the bottom sediment of Grand Lake ranged from 2.3 to 3.6 mg/kg (milligrams per kilogram) with a median of 3.5 mg/kg (5 samples). Compared to an estimated local background concentration of 0.6 mg/kg, the historical mining activity increased cadmium concentrations by about 280 to 500 percent. Lead concentrations ranged from 35 to 102 mg/kg with a median of 59 mg/kg (50 samples). Compared to an estimated local background concentration of 20 mg/kg, the historical mining activity increased lead concentrations by about 75 to 410 percent. The range in zinc concentrations was 380 to 986 mg/kg with a median of 765 mg/kg (50 samples). Compared to an estimated local background concentration of 100 mg/kg, the historical mining activity increased zinc concentrations by about 280 to 890 percent. With the exception of the most upstream coring site, the lead and zinc depositional profiles generally were similar in terms of the range in concentrations measured and the temporal pattern observed. Depositional profiles for lead and zinc indicated mid-core peaks followed by concentrations that decreased since about the 1980s. The depositional profiles reflect the complex interaction of several factors including historical mining and related activities, mine drainage, remediation, landscape stabilization, precipitation and associated runoff, and the erosion and transport of contaminated and clean sediments within the basin. Compared to sediment-quality guidelines, the Grand Lake samples had cadmium concentrations that were substantially less than the general probable-effects concentration (PEC) (4.98 mg/kg) and a TSMD-specific PEC (11.1 mg/kg). The PECs represent the concentration above which toxic biological effects are likely to occur. Likewise, all sediment samples had lead concentrations that were substantially less than the general PEC (128 mg/kg) and a TSMD-specific PEC (150 mg/kg). Zinc concentrations typically exceeded the general PEC (459 mg/kg), but were substantially less than a TSMD-specific PEC (2,083 mg/kg). Throughout the history of Grand Lake, lead and zinc concentrations in the deposited sediment did not approach or exceed the TSMD-specific PECs. As of 2008, legacy effects of mining still included the delivery of contaminated sediment to Grand Lake by the Spring and Neosho Rivers. The Neosho River, with its larger flows and less-contaminated sediment, likely dilutes the load of contaminated sediment delivered to Grand Lake by the Spring River. The information contained in this report provides a baseline of Grand Lake conditions with which to compare future conditions that may represent a response to changes in mining-related activity in the Grand Lake Basin.

Extending the analytical window for water-soluble organic matter in sediments by aqueous Soxhlet extraction

NASA Astrophysics Data System (ADS)

Schmidt, Frauke; Koch, Boris P.; Witt, Matthias; Hinrichs, Kai-Uwe

2014-09-01

Dissolved organic matter (DOM) in marine sediments is a complex mixture of thousands of individual constituents that participate in biogeochemical reactions and serve as substrates for benthic microbes. Knowledge of the molecular composition of DOM is a prerequisite for a comprehensive understanding of the biogeochemical processes in sediments. In this study, interstitial water DOM was extracted with Rhizon samplers from a sediment core from the Black Sea and compared to the corresponding water-extractable organic matter fraction (<0.4 μm) obtained by Soxhlet extraction, which mobilizes labile particulate organic matter and DOM. After solid phase extraction (SPE) of DOM, samples were analyzed for the molecular composition by Fourier Transform Ion-Cyclotron Resonance Mass Spectrometry (FT-ICR MS) with electrospray ionization in negative ion mode. The average SPE extraction yield of the dissolved organic carbon (DOC) in interstitial water was 63%, whereas less than 30% of the DOC in Soxhlet-extracted organic matter was recovered. Nevertheless, Soxhlet extraction yielded up to 4.35% of the total sedimentary organic carbon, which is more than 30-times the organic carbon content of the interstitial water. While interstitial water DOM consisted primarily of carbon-, hydrogen- and oxygen-bearing compounds, Soxhlet extracts yielded more complex FT-ICR mass spectra with more peaks and higher abundances of nitrogen- and sulfur-bearing compounds. The molecular composition of both sample types was affected by the geochemical conditions in the sediment; elevated concentrations of HS- promoted the early diagenetic sulfurization of organic matter. The Soxhlet extracts from shallow sediment contained specific three- and four-nitrogen-bearing molecular formulas that were also detected in bacterial cell extracts and presumably represent proteinaceous molecules. These compounds decreased with increasing sediment depth while one- and two-nitrogen-bearing molecules increased, resulting in a higher similarity of both sample types in the deep sediment. In summary, Soxhlet extraction of sediments accessed a larger and more complex pool of organic matter than present in interstitial water DOM.

Magnetostratigraphy of cave sediments, Wyandotte Ridge, Crawford County, southern Indiana

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pease, P.P.; Gomez, B.; Schmidt, V.A.

1992-01-01

The field polarities of 42 sediment samples obtained from 21 sites in Wyandotte Cave, and five smaller satellite caves in Wyandotte Ridge, southern Indiana, have been determined and correlated with magnetostratigraphic data from Mammoth Cave, Kentucky. In Wyandotte Cave sediment samples obtained between 137 m and 162 m in elevation possessed a normal field polarity, while samples obtained between 168 m and 171 m exhibited a field reversal. The reversal was interpreted to represent the most recent polarity change, dating the sediment fill and the end of the active period of the upper level of Wyandotte Cave at ca 0.788more » Ma. There is a temporal correlation between the active period of the upper level in Wyandotte Cave and the C-level in Mammoth Cave, which lies at a similar elevation. Such a correlation is most likely a consequence of the contemporaneous abandonment of passages in the two cave systems during the early Pleistocene reconstruction of the Ohio River system, which acts as the base level control in both caves. Samples from two caves near the top of Wyandotte Ridge, located between elevations of 236 m and 241 m, exhibited a normal polarity. These caves are located at a higher elevation than any of the sample sites in Mammoth Cave and their location suggests that the fill predates sediments from that system. It appears most likely that the fill in these caves is a minimum of ca 2.48 Ma. old and correlates with the residuum of the upper Mitchell Plain surface, not with the fill in the upper (A- or B-levels) in Mammoth Cave.« less

Estimates of long-term suspended-sediment loads in Bay Creek at Nebo, Pike County, Illinois, 1940-80

USGS Publications Warehouse

Lazaro, Timothy R.; Fitzgerald, Kathleen K.; Frost, Leonard R.

1984-01-01

Five years of daily suspended-sediment discharges (1968, 1969, 1975, 1976, and 1980) for Bay Creek at Nebo, Illinois, computed from once- or twice-weekly samples (more often during storm events), were used to develop transport equations that can be used to estimate long-term suspended-sediment discharges from long-term water-discharge records. Discharge was divided into three groups based on changes in slope on a graph of logarithms of water discharge versus suspended-sediment discharge. Two subgroups were formed within each of the three groups by determining whether the flow was steady or increasing, or was decreasing. Seasonality was accounted for by introducing day of the year in sine and cosine functions. The suspended-sediment load estimated from the equations for the 5 years was 77.3 percent of that computed from daily sediment- and water-discharge records for those years. The mean annual suspended-sediment load for 41 years of estimated loads was 359 ,500 tons, which represents a yield of about 3.5 tons per acre from the Bay Creek drainage basin. (USGS)

Arsenic and mercury concentrations in major landscape components of an intensively cultivated watershed.

PubMed

Cooper, C M; Gillespie, W B

2001-01-01

To provide an understanding of arsenic (As) and mercury (Hg) concentrations in soil, sediment, water, and fish tissues, samples were collected from a Mississippi River alluvial floodplain located in northwest Mississippi. As concentrations increased approximately an order of magnitude from water (5.12 micrograms/l) to fish tissues (36.99 micrograms/kg) and an additional two orders of magnitude in soils, lake sediments, and wetland sediments (5728, 5614, and 6746 micrograms/kg), respectively. Average Hg concentrations in water, soils, lake sediments, and fish were 2.16 micrograms/l, 55.1, 14.5 and 125 micrograms/kg, respectively. As and Hg concentrations were within published ranges for uncontaminated soil, water, and sediments. As concentrations represented a low risk. Hg concentrations were also low but showed a greater tendency to concentrate in fish tissue. The dominant mode of entry of these materials into aquatic systems is through storm-generated runoff. Since both metals accompany sediments, agricultural conservation practices such as reduced tillage, buffer riparian strips, and bordering sediment ponds or drainage wetlands will minimize watershed input to aquatic systems.

Assessment of Diesse Ves-matic automated system for measuring erythrocyte sedimentation rate.

PubMed Central

Caswell, M; Stuart, J

1991-01-01

Measurement of the erythrocyte sedimentation rate (ESR) using a closed tube system reduces the biohazard risk to laboratory staff. The Diesse Ves-matic system offers manual or vacuum collection of blood into plastic tubes, automated mixing of the sample, and automated reading of the end point after 20 minutes of sedimentation. This system was compared with the 1977 Westergren ESR method of the International Council for Standardization in Haematology (ICSH) and with the 1988 ICSH undiluted ESR method. Manually collected Ves-matic samples showed good agreement with ICSH values, although there was a tendency to false low results at low ESR values which may represent dilution of plasma protein with excess citrate. Vacuum collected Ves-matic samples also showed good agreement with ICSH values, although there was a tendency to false high results which may reflect a change in the blood: citrate ratio caused by loss of anticoagulant diluent or vacuum from plastic tubes during storage. The Diesse Ves-matic system incorporates several improvements over previous technology and offers a safer, quicker, and more standardised ESR. PMID:1752986

Occurrence and Ecological Risk Assessment of Eight Endocrine-Disrupting Chemicals in Urban River Water and Sediments of South China.

PubMed

Huang, Cong; Wu, Liu-Hong; Liu, Guo-Qiang; Shi, Lei; Guo, Ying

2018-05-03

Chemicals in the water of urban areas are representative of the occurrence of these chemicals in the city surrounding water systems and reflect recent human or industrial usage of those chemicals in the sampling areas. In this study, the levels of eight endocrine-disrupting chemicals [including bisphenol analogues, parabens, and triclosan (TCS)] were determined in urban river water and sediments in Guangzhou, South China, and their related ecological risks were evaluated. The eight target chemicals were frequently detected in our samples, with concentrations ranging from not detected (ND) to 65,600 ng/L and from ND to 492 ng/g dw in river water and sediments, respectively. Among these chemicals, the three most abundant were bisphenol A (BPA) (accounting for 35% of the total amount), methyl paraben (MeP) (23%), and TCS (14%) in river water and BPA (43%), TCS (37%), and MeP (14%) in sediments. Significant correlations were found between most target EDCs, particularly MeP and TCS, in river water and sediments (both p < 0.01), indicating their similar sources and wide usage. The ecological risk assessment methods used suggested that TCS was the chemical of primary concern, with an average hazard quotient (HQ) = 1.57 (up to 11.5) in river water and an average HQ = 0.74 (up to 3.63) in sediments. In addition, the ecological risk assessment of different sampling sites indicated a suspected high-risk level for some sites in the study area.

Assessing grain-size correspondence between flow and deposits of controlled floods in the Colorado River, USA

USGS Publications Warehouse

Draut, Amy; Rubin, David M.

2013-01-01

Flood-deposited sediment has been used to decipher environmental parameters such as variability in watershed sediment supply, paleoflood hydrology, and channel morphology. It is not well known, however, how accurately the deposits reflect sedimentary processes within the flow, and hence what sampling intensity is needed to decipher records of recent or long-past conditions. We examine these problems using deposits from dam-regulated floods in the Colorado River corridor through Marble Canyon–Grand Canyon, Arizona, U.S.A., in which steady-peaked floods represent a simple end-member case. For these simple floods, most deposits show inverse grading that reflects coarsening suspended sediment (a result of fine-sediment-supply limitation), but there is enough eddy-scale variability that some profiles show normal grading that did not reflect grain-size evolution in the flow as a whole. To infer systemwide grain-size evolution in modern or ancient depositional systems requires sampling enough deposit profiles that the standard error of the mean of grain-size-change measurements becomes small relative to the magnitude of observed changes. For simple, steady-peaked floods, 5–10 profiles or fewer may suffice to characterize grain-size trends robustly, but many more samples may be needed from deposits with greater variability in their grain-size evolution.

Biodiversity and community composition of sediment macrofauna associated with deep-sea Lophelia pertusa habitats in the Gulf of Mexico

USGS Publications Warehouse

Demopoulos, Amanda W.J.; Bourque, Jill R.; Frometa, Janessy

2014-01-01

Scleractinian corals create three-dimensional reefs that provide sheltered refuges, facilitate sediment accumulation, and enhance colonization of encrusting fauna. While heterogeneous coral habitats can harbor high levels of biodiversity, their effect on the community composition within nearby sediments remains unclear, particularly in the deep sea. Sediment macrofauna from deep-sea coral habitats (Lophelia pertusa) and non-coral, background sediments were examined at three sites in the northern Gulf of Mexico (VK826, VK906, MC751, 350–500 m depth) to determine whether macrofaunal abundance, diversity, and community composition near corals differed from background soft-sediments. Macrofaunal densities ranged from 26 to 125 individuals 32 cm−2 and were significantly greater near coral versus background sediments only at VK826. Of the 86 benthic invertebrate taxa identified, 16 were exclusive to near-coral habitats, while 14 were found only in background sediments. Diversity (Fisher’s α) and evenness were significantly higher within near-coral sediments only at MC751 while taxon richness was similar among all habitats. Community composition was significantly different both between near-coral and background sediments and among the three primary sites. Polychaetes numerically dominated all samples, accounting for up to 70% of the total individuals near coral, whereas peracarid crustaceans were proportionally more abundant in background sediments (18%) than in those near coral (10%). The reef effect differed among sites, with community patterns potentially influenced by the size of reef habitat. Taxon turnover occurred with distance from the reef, suggesting that reef extent may represent an important factor in structuring sediment communities near L. pertusa. Polychaete communities in both habitats differed from other Gulf of Mexico (GOM) soft sediments based on data from previous studies, and we hypothesize that local environmental conditions found near L. pertusa may influence the macrofaunal community structure beyond the edges of the reef. This study represents the first assessment of L. pertusa-associated sediment communities in the GOM and provides baseline data that can help define the role of transition zones, from deep reefs to soft sediments, in shaping macrofaunal community structure and maintaining biodiversity; this information can help guide future conservation and management activities.

Ridge to reef assessment of metal concentration and mineralogy in rocks and sediments on St. John, U.S. Virgin Islands

NASA Astrophysics Data System (ADS)

Harrington, R. J.; Gray, S. C.; Ramos-Scharron, C. E.; O'Shea, B.

2012-12-01

Land development on the island of St. John, US Virgin Islands is increasing terrigenous sediment loads into coastal bays and this is adversely affecting its sensitive, near-shore coral reef systems. Accelerated erosion of by-products originating from igneous bedrock may contribute metal-rich sediment to ephemeral streams and bays around St. John. In order to determine how development is affecting the production and transportation of land-based metals from watersheds to reef environments, we compare the chemistry and mineralogy of bedrock and sediment of both an undeveloped and a developed watershed and their corresponding bays. Both watersheds are comprised of bedrock of similar lithology (Water Island Formation: plagiorhyolite and basalt). Our study objectives are to: 1) determine what metal elements could serve as reliable stable geochemical tracers to track the transport of land-derived sediments to reefs; 2) document the total change in metal concentrations from in-situ bedrock and sediment along travel paths as the sediment gets transported from the watersheds to the reefs; and 3) estimate erosion rates from active sediment sources and metal accumulation rates within the marine environment. Whole rock, soil, stream, shore and reef sediment samples were collected from both study areas to represent a ridge to reef progression of material as it is eroded from the bedrock and transported to the reefs. Samples of in-situ rock and sediments were collected by hand, while material representing sediment being eroded from the watersheds and settling in the ephemeral streams and bays was captured by terrestrial and marine sediment traps. Major and trace element concentrations and the mineralogy of rock and sediments were analyzed using X-ray fluorescence, petrography and X-ray diffraction. Analyses of bedrock samples reveal mineral and elemental compositions typical of basalt and plagiorhyolite. In hydrothermally altered bedrock Ba and K concentrations elevated above non-hydrothermally altered bedrock are detected. A chemical weathering index of bedrock and adjacent C and B soil horizons suggests that some major elements, such as Ca, K and Na, are chemically weathering from bedrock and soils. However, some major and trace elements that derive from terrigenous sources (FeO, Al2O3, TiO2, Cu, Zr) resist chemical weathering and are transported to the shore and reef within eroded terrestrial sediment. The concentrations of these metals in marine trap sediments are strongly correlated with percent terrigenous material (R2= 0.80 - 0.94, p: <0.0001). This suggests these elements can be used as tracers for sediment derived from terrestrial environments. Watershed terrestrial metals concentrations do not show a consistent pattern of change from ridge to reef, but are generally higher in the watershed than the shore and reef sites. Higher concentrations (5 to 50 times higher depending on the element) of terrigenous derived metals are detected below the developed watershed compared to the undeveloped watershed. These data support previous research showing higher rates of terrigenous sedimentation in the marine environments of developed bays. These geochemical data will be compared to a watershed-scale erosion analysis of both study areas to quantify metal flux rates in this type of sub-tropical island system.

Geochemical maps of stream sediments in central Colorado, from New Mexico to Wyoming

USGS Publications Warehouse

Eppinger, Robert G.; Giles, Stuart A.; Klein, Terry L.

2015-01-01

The U.S. Geological Survey has completed a series of geologic, mineral resource, and environmental assessment studies in the Rocky Mountains of central Colorado, from Leadville eastward to the range front and from New Mexico to the Wyoming border. Regional stream-sediment geochemical maps, useful for assessing mineral resources and environmental effects of historical mining activities, were produced as part of the study. The data portrayed in this 56-parameter portfolio of landscape geochemical maps serve as a geochemical baseline for the region, indicate element abundances characteristic of various lithologic terranes, and identify gross anthropogenic effects of historical mining. However, although reanalyzed in this study by modern, sensitive methods, the majority of the stream-sediment samples were collected in the 1970s. Thus, metal concentrations portrayed in these maps represent stream-sediment geochemistry at the time of collection.

Pharmaceuticals, hormones, pesticides, and other bioactive contaminants in water, sediment, and tissue from Rocky Mountain National Park, 2012–2013

USGS Publications Warehouse

Battaglin, William A.; Bradley, Paul M.; Iwanowicz, Luke R.; Journey, Celeste A.; Walsh, Heather L.; Blazer, Vicki S.

2018-01-01

Pharmaceuticals, hormones, pesticides, and other bioactive contaminants (BCs) are commonly detected in surface water and bed sediment in urban and suburban areas, but these contaminants are understudied in remote locations. In Rocky Mountain National Park (RMNP), Colorado, USA, BCs may threaten the reproductive success and survival of native aquatic species, benthic communities, and pelagic food webs. In 2012–2013, 67 water, 57 sediment, 63 fish, 10 frog, and 12 quality-control samples (8 water and 4 sediment) were collected from 20 sites in RMNP. Samples were analyzed for 369 parameters including 149 pharmaceuticals, 22 hormones, 137 pesticides, and 61 other chemicals or conditions to provide a representative assessment of BC occurrence within RMNP. Results indicate that BCs were detected in water and/or sediment from both remote and more accessible locations in RMNP. The most commonly detected BCs in water were caffeine, camphor, para-cresol, and DEET; and the most commonly detected BCs in sediment were indole, 3-methyl-1H-indole, para-cresol, and 2,6-dimethyl-naphthalene. Some detected contaminants, including carbaryl, caffeine, and oxycodone, are clearly attributable to direct local human input, whereas others may be transported into the park atmospherically (e.g., atrazine) or have local natural sources (e.g., para-cresol). One or more pharmaceuticals were detected in at least 1 sample from 15 of 20 sites. Most of the 29 detected pharmaceuticals are excreted primarily in human urine, not feces. Elevated net estrogenicity was observed in 18% of water samples, and elevated vitellogenin in blood was observed in 12% of male trout, both evidence of potential endocrine disruption. Hormone concentrations in sediment tended to be greater than concentrations in water. Most BCs were observed at concentrations below those not expected to pose adverse effects to aquatic life. Results indicate that even in remote locations aquatic wildlife can be exposed to pharmaceuticals, hormones, pesticides, and other bioactive contaminants.

Characteristics of suspended and streambed sediment within constructed chutes and the main channel at Upper Hamburg and Glovers Point Bends, Missouri River, Nebraska, 2008

USGS Publications Warehouse

Woodward, Brenda K.; Rus, David L.

2011-01-01

The U.S. Army Corps of Engineers, Omaha District, as part of the Missouri River Bank Stabilization and Navigation Mitigation Project, has constructed 17 off-channel chutes along the channelized Missouri River, downstream from Sioux City, Iowa, to increase habitat diversity. To better understand characteristics of suspended and streambed sediment within these constructed chutes, the U.S. Geological Survey investigated specific aspects of chute design and function in relation to sediment characteristics including: (1) effects of inlet structures; (2) changes occurring between the inlet and the outlet of a chute; (3) effects of chutes on sediment characteristics in the main channel; and (4) differences in chute dynamics between sampled chutes. Two chutes differing in design, location, and dynamics were studied, Upper Hamburg Bend near Nebraska City, Nebr., and Glovers Point Bend near Winnebago, Nebr. Each site was characterized using five or more sampling transects (two in the chute and three to four in the main channel) designed to bracket sediment exchanges between chutes and the main channel. A sixth transect was included at the Upper Hamburg Bend study site to account for the effects of a nontarget chute having its inlet midway between the inlet and outlet of the primary chute. Representative samples of suspended and streambed sediment were collected at each transect, along with measurements of turbidity and streamflow, between June and November 2008. Four sets of samples were collected at the Glovers Point Bend study site and five sample sets were collected from the Upper Hamburg Bend study site. Results from paired t-tests and standard t-tests indicated that the inlet structure design, passing inflow only from the top of the main-channel water column, reduced the supply of coarse-grained suspended sediment entering the chutes. Statistical comparisons did not indicate differences between the inlet and outlet of either chute; however, anecdotal evidence of recent bank erosion and in-channel deposition was observed in both chutes during the study period. Chutes had little effect on Missouri River main-channel sediment characteristics, which could be explained by the much greater streamflow of the main channel. Between-chute comparisons showed no significant differences in the suspended-sediment characteristics; however, the Upper Hamburg Bend chute had a coarser streambed, wider channel, and much greater streamflow than did the Glovers Point Bend chute.

Potential interactions among disease, pesticides, water quality and adjacent land cover in amphibian habitats in the United States.

PubMed

Battaglin, W A; Smalling, K L; Anderson, C; Calhoun, D; Chestnut, T; Muths, E

2016-10-01

To investigate interactions among disease, pesticides, water quality, and adjacent land cover, we collected samples of water, sediment, and frog tissue from 21 sites in 7 States in the United States (US) representing a variety of amphibian habitats. All samples were analyzed for >90 pesticides and pesticide degradates, and water and frogs were screened for the amphibian chytrid fungus Batrachochytrium dendrobatidis (Bd) using molecular methods. Pesticides and pesticide degradates were detected frequently in frog breeding habitats (water and sediment) as well as in frog tissue. Fungicides occurred more frequently in water, sediment, and tissue than was expected based upon their limited use relative to herbicides or insecticides. Pesticide occurrence in water or sediment was not a strong predictor of occurrence in tissue, but pesticide concentrations in tissue were correlated positively to agricultural and urban land, and negatively to forested land in 2-km buffers around the sites. Bd was detected in water at 45% of sites, and on 34% of swabbed frogs. Bd detections in water were not associated with differences in land use around sites, but sites with detections had colder water. Frogs that tested positive for Bd were associated with sites that had higher total fungicide concentrations in water and sediment, but lower insecticide concentrations in sediments relative to frogs that were Bd negative. Bd concentrations on frog swabs were positively correlated to dissolved organic carbon, and total nitrogen and phosphorus, and negatively correlated to pH and water temperature. Data were collected from a range of locations and amphibian habitats and represent some of the first field-collected information aimed at understanding the interactions between pesticides, land use, and amphibian disease. These interactions are of particular interest to conservation efforts as many amphibians live in altered habitats and may depend on wetlands embedded in these landscapes to survive. Published by Elsevier B.V.

Potential interactions among disease, pesticides, water quality and adjacent land cover in amphibian habitats in the United States

USGS Publications Warehouse

Battaglin, William A.; Smalling, Kelly L.; Anderson, Chauncey; Calhoun, Daniel L.; Chestnut, Tara E.; Muths, Erin L.

2016-01-01

To investigate interactions among disease, pesticides, water quality, and adjacent land cover, we collected samples of water, sediment, and frog tissue from 21 sites in 7 States in the United States (US) representing a variety of amphibian habitats. All samples were analyzed for > 90 pesticides and pesticide degradates, and water and frogs were screened for the amphibian chytrid fungus Batrachochytrium dendrobatidis (Bd) using molecular methods. Pesticides and pesticide degradates were detected frequently in frog breeding habitats (water and sediment) as well as in frog tissue. Fungicides occurred more frequently in water, sediment, and tissue than was expected based upon their limited use relative to herbicides or insecticides. Pesticide occurrence in water or sediment was not a strong predictor of occurrence in tissue, but pesticide concentrations in tissue were correlated positively to agricultural and urban land, and negatively to forested land in 2-km buffers around the sites. Bd was detected in water at 45% of sites, and on 34% of swabbed frogs. Bd detections in water were not associated with differences in land use around sites, but sites with detections had colder water. Frogs that tested positive for Bd were associated with sites that had higher total fungicide concentrations in water and sediment, but lower insecticide concentrations in sediments relative to frogs that were Bd negative. Bd concentrations on frog swabs were positively correlated to dissolved organic carbon, and total nitrogen and phosphorus, and negatively correlated to pH and water temperature.Data were collected from a range of locations and amphibian habitats and represent some of the first field-collected information aimed at understanding the interactions between pesticides, land use, and amphibian disease. These interactions are of particular interest to conservation efforts as many amphibians live in altered habitats and may depend on wetlands embedded in these landscapes to survive.

Hydrologic and Water-Quality Responses in Shallow Ground Water Receiving Stormwater Runoff and Potential Transport of Contaminants to Lake Tahoe, California and Nevada, 2005-07

USGS Publications Warehouse

Green, Jena M.; Thodal, Carl E.; Welborn, Toby L.

2008-01-01

Clarity of Lake Tahoe, California and Nevada has been decreasing due to inflows of sediment and nutrients associated with stormwater runoff. Detention basins are considered effective best management practices for mitigation of suspended sediment and nutrients associated with runoff, but effects of infiltrated stormwater on shallow ground water are not known. This report documents 2005-07 hydrogeologic conditions in a shallow aquifer and associated interactions between a stormwater-control system with nearby Lake Tahoe. Selected chemical qualities of stormwater, bottom sediment from a stormwater detention basin, ground water, and nearshore lake and interstitial water are characterized and coupled with results of a three-dimensional, finite-difference, mathematical model to evaluate responses of ground-water flow to stormwater-runoff accumulation in the stormwater-control system. The results of the ground-water flow model indicate mean ground-water discharge of 256 acre feet per year, contributing 27 pounds of phosphorus and 765 pounds of nitrogen to Lake Tahoe within the modeled area. Only 0.24 percent of this volume and nutrient load is attributed to stormwater infiltration from the detention basin. Settling of suspended nutrients and sediment, biological assimilation of dissolved nutrients, and sorption and detention of chemicals of potential concern in bottom sediment are the primary stormwater treatments achieved by the detention basins. Mean concentrations of unfiltered nitrogen and phosphorus in inflow stormwater samples compared to outflow samples show that 55 percent of nitrogen and 47 percent of phosphorus are trapped by the detention basin. Organic carbon, cadmium, copper, lead, mercury, nickel, phosphorus, and zinc in the uppermost 0.2 foot of bottom sediment from the detention basin were all at least twice as concentrated compared to sediment collected from 1.5 feet deeper. Similarly, concentrations of 28 polycyclic aromatic hydrocarbon compounds were all less than laboratory reporting limits in the deeper sediment sample, but 15 compounds were detected in the uppermost 0.2 foot of sediment. Published concentrations determined to affect benthic aquatic life also were exceeded for copper, zinc, benz[a]anthracene, phenanthrene, and pyrene in the shallow sediment sample. Isotopic composition of water (oxygen 18/16 and hydrogen 2/1 ratios) for samples of shallow ground water, lakewater, and interstitial water from Lake Tahoe indicate the lake was well mixed with a slight ground-water signature in samples collected near the lakebed. One interstitial sample from 0.8 foot beneath the lakebed was nearly all ground water and concentrations of nitrogen and phosphorus were comparable to concentrations in shallow ground-water samples. However, ammonium represented 65 percent of filtered nitrogen in this interstitial sample, but only 10 percent of the average nitrogen in ground-water samples. Nitrate was less than reporting limits in interstitial water, compared with mean nitrate concentration of 750 micrograms per liter in ground-water samples, indicating either active dissimilative nitrate reduction to ammonium by micro-organisms or hydrolysis of organic nitrogen to ammonium with concomitant nitrate reduction. The other interstitial sample falls along a mixing line between ground water and lake water and most of the nitrogen was organic nitrogen.

Exploration of Microbial Diversity and Community Structure of Lonar Lake: The Only Hypersaline Meteorite Crater Lake within Basalt Rock

PubMed Central

Paul, Dhiraj; Kumbhare, Shreyas V.; Mhatre, Snehit S.; Chowdhury, Somak P.; Shetty, Sudarshan A.; Marathe, Nachiket P.; Bhute, Shrikant; Shouche, Yogesh S.

2016-01-01

Lonar Lake is a hypersaline and hyperalkaline soda lake and the only meteorite impact crater in the world situated in basalt rocks. Although culture-dependent studies have been reported, a comprehensive understanding of microbial community composition and structure in Lonar Lake remains elusive. In the present study, microbial community structure associated with Lonar Lake sediment and water samples was investigated using high-throughput sequencing. Microbial diversity analysis revealed the existence of diverse, yet largely consistent communities. Proteobacteria (30%), Actinobacteria (24%), Firmicutes (11%), and Cyanobacteria (5%) predominated in the sequencing survey, whereas Bacteroidetes (1.12%), BD1-5 (0.5%), Nitrospirae (0.41%), and Verrucomicrobia (0.28%) were detected in relatively minor abundances in the Lonar Lake ecosystem. Within the Proteobacteria phylum, the Gammaproteobacteria represented the most abundantly detected class (21–47%) within sediment samples, but only a minor population in the water samples. Proteobacteria and Firmicutes were found at significantly higher abundance (p ≥ 0.05) in sediment samples, whereas members of Actinobacteria, Candidate division TM7 and Cyanobacteria (p ≥ 0.05) were significantly abundant in water samples. Compared to the microbial communities of other hypersaline soda lakes, those of Lonar Lake formed a distinct cluster, suggesting a different microbial community composition and structure. Here we report for the first time, the difference in composition of indigenous microbial communities between the sediment and water samples of Lonar Lake. An improved census of microbial community structure in this Lake ecosystem provides a foundation for exploring microbial biogeochemical cycling and microbial function in hypersaline lake environments. PMID:26834712

Estimating suspended sediment and trace element fluxes in large river basins: Methodological considerations as applied to the NASQAN programme

USGS Publications Warehouse

Horowitz, A.J.; Elrick, K.A.; Smith, J.J.

2001-01-01

In 1994, the NASQAN (National Stream Quality Accounting Network) programme was redesigned as a flux-based water-quality monitoring network for the Mississippi, Columbia, Colorado, and Rio Grande Basins. As the new programme represented a departure from the original, new sampling, processing, analytical, and data handling procedures had to be selected/developed to provide data on discharge, suspended sediment concentration, and the concentrations of suspended sediment and dissolved trace elements. Annual suspended sediment fluxes were estimated by summing daily instantaneous fluxes based on predicted suspended sediment concentrations derived from discharge-based log-log regression (rating-curve) models. The models were developed using both historical and current site-specific discharge and suspended sediment concentrations. Errors using this approach typically are less than ?? 10% for the 3-year reporting period; however, the magnitude of the errors increases substantially for temporal spans shorter than 1 year. Total, rather than total-recoverable, suspended sediment-associated trace element concentrations were determined by direct analysis of material dewatered from large-volume whole-water samples. Site-specific intra- and inter-annual suspended sediment-associated chemical variations were less (typically by no more than a factor of two) than those for either discharge or suspended sediment concentrations (usually more than 10-fold). The concentrations, hence the annual fluxes, for suspended sediment-associated phosphorus and organic carbon, determined by direct analyses, were higher than those determined using a more traditional paired, whole-water/filtered-water approach (by factors ranging from 1.5- to 10-fold). This may be important for such issues as eutrophication and coastal productivity. Filtered water-associated (dissolved) trace element concentrations were markedly lower than those determined during the historical NASQAN programme; many were below their respective detection limits. This resulted from the use of clean sampling, processing, and analytical protocols. Hence, the fluxes for filtered water-associated (dissolved) Ag, Pb, Co, V, Be, Sb, and Se, as well as the total (filtered water plus suspended sediment-associated) fluxes for these constituents, could not be estimated.

Methods for Investigating Mercury Speciation, Transport, Methylation, and Bioaccumulation in Watersheds Affected by Historical Mining

NASA Astrophysics Data System (ADS)

Alpers, C. N.; Marvin-DiPasquale, M. C.; Fleck, J.; Ackerman, J. T.; Eagles-Smith, C.; Stewart, A. R.; Windham-Myers, L.

2016-12-01

Many watersheds in the western U.S. have mercury (Hg) contamination from historical mining of Hg and precious metals (gold and silver), which were concentrated using Hg amalgamation (mid 1800's to early 1900's). Today, specialized sampling and analytical protocols for characterizing Hg and methylmercury (MeHg) in water, sediment, and biota generate high-quality data to inform management of land, water, and biological resources. Collection of vertically and horizontally integrated water samples in flowing streams and use of a Teflon churn splitter or cone splitter ensure that samples and subsamples are representative. Both dissolved and particulate components of Hg species in water are quantified because each responds to different hydrobiogeochemical processes. Suspended particles trapped on pre-combusted (Hg-free) glass- or quartz-fiber filters are analyzed for total mercury (THg), MeHg, and reactive divalent mercury. Filtrates are analyzed for THg and MeHg to approximate the dissolved fraction. The sum of concentrations in particulate and filtrate fractions represents whole water, equivalent to an unfiltered sample. This approach improves upon analysis of filtered and unfiltered samples and computation of particulate concentration by difference; volume filtered is adjusted based on suspended-sediment concentration to minimize particulate non-detects. Information from bed-sediment sampling is enhanced by sieving into multiple size fractions and determining detailed grain-size distribution. Wet sieving ensures particle disaggregation; sieve water is retained and fines are recovered by centrifugation. Speciation analysis by sequential extraction and examination of heavy mineral concentrates by scanning electron microscopy provide additional information regarding Hg mineralogy and geochemistry. Biomagnification of MeHg in food webs is tracked using phytoplankton, zooplankton, aquatic and emergent vegetation, invertebrates, fish, and birds. Analysis of zooplankton in multiple size fractions from multiple depths in reservoirs can provide insight into food-web dynamics. The presentation will highlight application of these methods in several Hg-contaminated watersheds, with emphasis on understanding seasonal variability in designing effective sampling strategies.

Offshore gas hydrate sample database with an overview and preliminary analysis

USGS Publications Warehouse

Booth, James S.; Rowe, Mary M.; Fisher, Kathleen M.

1996-01-01

Synopsis -- A database of offshore gas hydrate samples was constructed from published observations and measurements. More than 90 samples from 15 distinct regions are represented in 13 data categories. This database has permitted preliminary description of gas hydrate (chiefly methane hydrate) tendencies and associations with respect to their geological environment. Gas hydrates have been recovered from offshore sediment worldwide and from total depths (water depth plus subseabed depth) ranging from 500 m to nearly 6,000 m. Samples have come from subbottom depths ranging from 0 to 400 m. Various physiographic provinces are represented in the data set including second order landforms such as continental margins and deep-sea trenches, and third order forms such as submarine canyons, continental slopes, continental margin ridges and intraslope basins. There is a clear association between fault zones and other manifestations of local, tectonic-related processes, and hydrate-bearing sediment. Samples of gas hydrate frequently consist of individual grains or particles. These types of hydrates are often further described as inclusions or disseminated in the sediment. Moreover, hydrates occur as a cement, as nodules, or as layers (mostly laminae) or in veins. The preponderance of hydrates that could be characterized as 2- dimensional (planar) were associated with fine sediment, either as intercalated layers or in fractures. Hydrate cements were commonly associated with coarser sediment. Hydrates have been found in association with grain sizes ranging from clay through gravel. More hydrates are associated with the more abundant finer-grained sediment than with coarser sediment, and many were discovered in the presence of both fine (silt and clay) and coarse sediment. The thickness of hydrate zones (i. e., sections of hydrate-bearing sediment) varies from a few centimeters to as much as 30 m. In contrast, the thickness of layers of pure hydrate or the dimensions of individual hydrate grains were most often characterized in terms of millimeters or centimeters, although a pure hydrate layer discovered in the Middle America Trench off Guatemala was as much as 3-4-m-thick. The data suggest that grains, or thin veins or laminae of pure gas hydrate may be ubiquitous in many hydrate zones but that typically they may only comprise a minor component of the thicker zones. In more than 80 percent of the hydrate samples the methane was of biogenic origin. The methane in the remainder was either classified as (or may be at least part) thermogenic. Each site where thermogenic gas was identified is characterized by faults or other manifestions of a dynamic geological environment (e.g., diapirs, mud volcanoes, gas seeps). Every sample in the database came from within the zone of theoretical methane hydrate stability, as determined on the basis of assumed regional pressure and temperature gradients. Most show that they were situated --- expressed in terms of depth --- well above the phase boundary and about 70% of the samples were located more than 100 m above the assumed regional position of that boundary. The calculated subseabed positions of the phase boundaries and the BSRs (bottom simulating reflector) are essentially identical. This may be taken as general corroboration of the regional phase boundary calculations and the concept of the BSR. Three provocative aspects of marine gas hydrates have been disclosed by the database: gas hydrates are frequently situated at much shallower subseabed depths than the assumed contemporary position of the regional phase boundary hydrates are often found in areas typified by faults or other indicators of a dynamic geological environment zones of gas hydrate-bearing sediment tend to be tens of centimeters to tens of meters thick but the hydrate within the thicker zones tends to be only a minor constituent. Whether existing as dispersed particles, cements, or pure layers or vein

Deep subsurface life from North Pond: Enrichment, isolation, characterization and genomes of heterotrophic bacteria

DOE Office of Scientific and Technical Information (OSTI.GOV)

Russell, Joseph A.; Leon-Zayas, Rosa; Wrighton, Kelly

Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic watercolumn west of the Mid-Atlantic Ridge at 22° N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP Hole U1382B at 4 and 68 m below seafloor (mbsf). These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sedimentmore » column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, initial characterization and genomes of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2%) relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. Furthermore, the cultures from this study represent members of abundant phyla, as determined by amplicon sequencing of environmental DNA extracts, and allow for further studies into geochemical factors impacting life in the deep subsurface.« less

Deep subsurface life from North Pond: Enrichment, isolation, characterization and genomes of heterotrophic bacteria

DOE PAGES

Russell, Joseph A.; Leon-Zayas, Rosa; Wrighton, Kelly; ...

2016-05-10

Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic watercolumn west of the Mid-Atlantic Ridge at 22° N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP Hole U1382B at 4 and 68 m below seafloor (mbsf). These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sedimentmore » column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, initial characterization and genomes of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2%) relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. Furthermore, the cultures from this study represent members of abundant phyla, as determined by amplicon sequencing of environmental DNA extracts, and allow for further studies into geochemical factors impacting life in the deep subsurface.« less

Relations between continuous real-time turbidity data and discrete suspended-sediment concentration samples in the Neosho and Cottonwood Rivers, east-central Kansas, 2009-2012

USGS Publications Warehouse

Foster, Guy M.

2014-01-01

The Neosho River and its primary tributary, the Cottonwood River, are the primary sources of inflow to the John Redmond Reservoir in east-central Kansas. Sedimentation rate in the John Redmond Reservoir was estimated as 743 acre-feet per year for 1964–2006. This estimated sedimentation rate is more than 80 percent larger than the projected design sedimentation rate of 404 acre-feet per year, and resulted in a loss of 40 percent of the conservation pool since its construction in 1964. To reduce sediment input into the reservoir, the Kansas Water Office implemented stream bank stabilization techniques along an 8.3 mile reach of the Neosho River during 2010 through 2011. The U.S. Geological Survey, in cooperation with the Kansas Water Office and funded in part through the Kansas State Water Plan Fund, operated continuous real-time water-quality monitors upstream and downstream from stream bank stabilization efforts before, during, and after construction. Continuously measured water-quality properties include streamflow, specific conductance, water temperature, and turbidity. Discrete sediment samples were collected from June 2009 through September 2012 and analyzed for suspended-sediment concentration (SSC), percentage of sediments less than 63 micrometers (sand-fine break), and loss of material on ignition (analogous to amount of organic matter). Regression models were developed to establish relations between discretely measured SSC samples, and turbidity or streamflow to estimate continuously SSC. Continuous water-quality monitors represented between 96 and 99 percent of the cross-sectional variability for turbidity, and had slopes between 0.91 and 0.98. Because consistent bias was not observed, values from continuous water-quality monitors were considered representative of stream conditions. On average, turbidity-based SSC models explained 96 percent of the variance in SSC. Streamflow-based regressions explained 53 to 60 percent of the variance. Mean squared prediction error for turbidity-based regression relations ranged from -32 to 48 percent, whereas mean square prediction error for streamflow-based regressions ranged from -69 to 218 percent. These models are useful for evaluating the variability of SSC during rapidly changing conditions, computing loads and yields to assess SSC transport through the watershed, and for providing more accurate load estimates compared to streamflow-only based estimation methods used in the past. These models can be used to evaluate the efficacy of streambank stabilization efforts.

Monitoring heavy metal concentrations in the sediments of the Moskva and Oka River system- Results of the Volga-Rhine-Project

NASA Astrophysics Data System (ADS)

Andresen, Höpke

2010-05-01

In the course of the Volga-Rhine-Project sediment, water and pore water samples were collected on the Volga as well as the Moskva and Oka river systems. The sampling area discussed here is located south east of the city of Moscow. Sediment samples were taken along the Moskva River between Moscow and the city of Kolomna, which is approximately 100 km to the southeast of Moscow and in the Oka River close to the confluence with the Moskva River (Kolomna). The first sampling campaign in this region took place in 1993, followed by further sampling in 1997 and 2007. For evaluation of sediment quality classification systems are often used. The geo-accumulation index proposed by Mueller (1979) is a classification system which consists of seven classes given by the following expression: I = log2×Cn- geo 1.5×Bn Where Cn = measured concentration; Bn = background value (Turekian & Wedepol 1961) of element n and 1.5 = background matrix correction factor. The geo-accumulation index consists of seven grades (0-6) which indicate the enrichment of an element compared to the background value. These grades range from 'not polluted' to 'very strongly polluted'. Another possibility to express sediment contamination is to evaluate the effects on the ecosystem. The lowest effect level (LEL) gives the concentrations of the heavy metals in sediment below which no effect on the majority of the sediment dwelling organisms is expected. The probable effect level (PEL) represents the concentration of heavy metals above which the organisms frequently will show adverse effects. Both of these approaches were used to evaluate the results of the Volga-Rhine-Project. In the last two decades the concentrations of heavy metals in the sediments decreased by up to 60%. In 1993 sediments revealed high concentrations of several heavy metals such as chromium, cadmium, lead, zinc, arsenic, nickel and cobalt, whereas in 2007 only two sediment samples were classified as 'very strongly polluted' regarding lead and cadmium concentrations. Additionally six other sediment samples were found to be 'strongly polluted' with cadmium, zinc and lead, respectively. Using the ecotoxicological approach on the sediments, chromium, cadmium and zinc are above the PEL, whereas the content of lead exceeds the LEL. Thus, these metals may still cause toxic effects on the fresh water system. Although the input of heavy metals into the river systems has clearly decreased during the last 20 years, there are still some locations where high concentrations of heavy metals are found, suggesting point sources. Especially cadmium still shows significantly higher concentrations than the background value in the entire sampling area. There are even two sampling points where the cadmium concentrations reach approximately 100x the background value. To determine the temporal variation of the heavy metal input, sediment cores were taken. Heavy metal concentrations increase with depth in the cores and show a maximum at a depth of about 35-40 cm. Some part of this increase may be a result of early diagenesis as well as a result of reduced heavy metal input. The nature of the decline of the heavy metal concentrations is still in progress. Despite all the improvements achieved in environmental protection in Russia, still some problems have to be addressed. Especially in urban areas like the Moscow region the number and the size of illegal dump sites is increasing dramatically, leading to strong inputs of heavy metals and other pollutants into the river systems, with consequences for the sensitive eco systems.

Organic wastewater compounds in water and sediment in and near restored wetlands, Great Marsh, Indiana Dunes National Lakeshore, 2009–11

USGS Publications Warehouse

Egler, Amanda L.; Risch, Martin R.; Alvarez, David A.; Bradley, Paul M.

2013-01-01

A cooperative investigation between the U.S. Geological Survey and the National Park Service was completed from 2009 through 2011 to understand the occurrence, distribution, and environmental processes affecting concentrations of organic wastewater compounds in water and sediment in and near Great Marsh at the Indiana Dunes National Lakeshore in Beverly Shores, Indiana. Sampling sites were selected to represent hydrologic inputs to the restored wetlands from adjacent upstream residential and less developed areas and to represent discharge points of cascading cells within the restored wetland. A multiphase approach was used for the investigation. Discrete water samples and time-integrated passive samples were analyzed for 69 organic wastewater compounds. Continuous water-level information and periodic streamflow measurements characterized flow conditions at discharge points from restored wetland cells. Wetland sediments were collected and analyzed for sorptive losses of organic wastewater compounds and to evaluate of the potential for wetland sediments to biotransform organic wastewater compounds. A total of 52 organic wastewater compounds were detected in discrete water samples at 1 or more sites. Detections of organic wastewater compounds were widespread, but concentrations were generally low and 95 percent were less than 2.1 micrograms per liter. Six compounds were detected at concentrations greater than 2.1 micrograms per liter—four fecal sterols (beta-sitosterol, cholesterol, beta-stigmastanol, and 2-beta coprostanol), one plasticizer (bis-2-ethylhex ylphthalate), and a non-ionic detergent (4-nonylphenol diethoxylate). Two 1-month deployments of time-integrative passive samplers, called polar organic chemical integrative samplers, detected organic wastewater compounds at lower concentrations than were possible with discrete water samples. Isopropyl benzene (solvent), caffeine (plant alkaloid, stimulant), and hexahydrohexamethyl cyclopentabenzopyran (fragrance) were detected in more than half of the extracts from passive samplers, but they were not detected in any discrete water sample. The Yeast Estrogen Screen assay identified measurable estrogenicity in one passive sampler extract from the most downstream wetland site in both the April and November–December 2011 deployments and in passive sampler extracts from one residential and one upstream site in the November–December 2011 deployment only. Surface-water levels in the restored wetland cells were monitored continuously using submersible pressure transducers in hand-driven well points screened in the surface water. Surface-water levels in the wetland cells responded quickly to precipitation and substantially receded within 2 days following the largest rainfall events. Seasonal patterns in water levels generally showed higher and more variable surface-water levels in the wetland cells during spring and early summer. Water levels in the wetland cells fell below the elevation of the control structures and ceased to flow over the spillways during extended dry periods (primarily late summer and early fall). Daily loads of seven organic wastewater compounds, as indicators of septic system effluent, were estimated for samples collected at wetland outlet spillways when flow measurements could be made. Median daily loads of the indicator organic wastewater compounds increased in downstream order, and the largest median loads were measured at the most downstream site. Median daily loads were higher for samples collected in spring and summer than those collected in fall, as the higher seasonal water levels increased streamflow at the wetland outlet spillways. Wetland sediment samples were analyzed for 84 organic wastewater compounds, polycyclic aromatic hydrocarbons, and semivolatile organic compounds to investigate the fate of contaminants in Great Marsh. The top five detected compounds by total mass in wetland sediment samples were beta-sitosterol, beta-stigmastanol, cholesterol, bis(2-ethylhexyl) phthalate, and phenol. Polycyclic aromatic hydrocarbons also were frequently detected in wetland sediment samples. Source apportionment of polycyclic aromatic hydrocarbon detections indicated atmospheric sources of pyrogenic compounds, rather than residential sources. Comparisons of polycyclic aromatic hydrocarbon concentrations in wetland sediment samples to sediment quality target guidelines indicated the potential for harmful effects on sediment-dwelling organisms at several sites. Biodegradation of select endocrine-disrupting compounds (17α-ethinylestradiol, 4-nonylphenol, triclocarban, and bisphenol A) in shallow wetland sediments was evaluated in laboratory experiments by using carbon-14 radiolabeled model contaminants. Substantial biodegradation of certain organic wastewater compounds were demonstrated, primarily in oxic (oxygen containing) environments. One of four modeled compounds, bisphenol A, was biodegraded in anoxic (oxygen free) environments. Only sediments collected nearest residential areas exhibited degradation of the synthetic birth control pharmaceutical, 17α-ethinylestradiol, possibly owing to adaptation and acclimation of the indigenous microbial community to septic discharge and the resultant selection of a microbial capability for biodegradation of 17α-ethinylestradiol.

Sediment contributions from floodplains and legacy sediments to Piedmont streams of Baltimore County, Maryland

NASA Astrophysics Data System (ADS)

Donovan, Mitchell; Miller, Andrew; Baker, Matthew; Gellis, Allen

2015-04-01

Disparity between watershed erosion rates and downstream sediment delivery has remained an important theme in geomorphology for many decades, with the role of floodplains in sediment storage as a common focus. In the Piedmont Province of the eastern USA, upland deforestation and agricultural land use following European settlement led to accumulation of thick packages of overbank sediment in valley bottoms, commonly referred to as legacy deposits. Previous authors have argued that legacy deposits represent a potentially important source of modern sediment loads following remobilization by lateral migration and progressive channel widening. This paper seeks to quantify (1) rates of sediment remobilization from Baltimore County floodplains by channel migration and bank erosion, (2) proportions of streambank sediment derived from legacy deposits, and (3) potential contribution of net streambank erosion and legacy sediments to downstream sediment yield within the Mid-Atlantic Piedmont. We calculated measurable gross erosion and deposition rates within the fluvial corridor along 40 valley segments from 18 watersheds with drainage areas between 0.18 and 155 km2 in Baltimore County, Maryland. We compared stream channel and floodplain morphology from lidar-based digital elevation data collected in 2005 with channel positions recorded on 1:2400 scale topographic maps from 1959-1961 in order to quantify 44-46 years of channel change. Sediment bulk density and particle size distributions were characterized from streambank and channel deposit samples and used for volume to mass conversions and for comparison with other sediment sources. Average annual lateral migration rates ranged from 0.04 to 0.19 m/y, which represented an annual migration of 2.5% (0.9-4.4%) channel width across all study segments, suggesting that channel dimensions may be used as reasonable predictors of bank erosion rates. Gross bank erosion rates varied from 43 to 310 Mg/km/y (median = 114) and were positively correlated with drainage area. Measured deposition within channels accounted for an average of 46% (28-75%) of gross erosion, with deposition increasingly important in larger drainages. Legacy sediments accounted for 6-90% of bank erosion at individual study segments, represented about 60% of bank height at most exposures, and accounted for 57% (± 16%) of the measured gross erosion. Extrapolated results indicated that first- and second-order streams accounted for 62% (± 38%) of total streambank erosion from 1005 km2 of northern Baltimore County. After accounting for estimated redeposition, extrapolated net streambank sediment yields (72 Mg/km2/y) constituted 70% of estimated average Piedmont watershed yields (104 Mg/km2/y). The results suggest that streambank sediments are a relatively large source of sediment from Piedmont tributaries to the Chesapeake Bay.

Sediment contributions from floodplains and legacy sediments to Piedmont streams of Baltimore County, Maryland

USGS Publications Warehouse

Donovan, Mitchell; Miller, Andrew; Baker, Matthew; Gellis, Allen C.

2015-01-01

Disparity between watershed erosion rates and downstream sediment delivery has remained an important theme in geomorphology for many decades, with the role of floodplains in sediment storage as a common focus. In the Piedmont Province of the eastern USA, upland deforestation and agricultural land use following European settlement led to accumulation of thick packages of overbank sediment in valley bottoms, commonly referred to as legacy deposits. Previous authors have argued that legacy deposits represent a potentially important source of modern sediment loads following remobilization by lateral migration and progressive channel widening. This paper seeks to quantify (1) rates of sediment remobilization from Baltimore County floodplains by channel migration and bank erosion, (2) proportions of streambank sediment derived from legacy deposits, and (3) potential contribution of net streambank erosion and legacy sediments to downstream sediment yield within the Mid-Atlantic Piedmont.We calculated measurable gross erosion and deposition rates within the fluvial corridor along 40 valley segments from 18 watersheds with drainage areas between 0.18 and 155 km2 in Baltimore County, Maryland. We compared stream channel and floodplain morphology from lidar-based digital elevation data collected in 2005 with channel positions recorded on 1:2400 scale topographic maps from 1959–1961 in order to quantify 44–46 years of channel change. Sediment bulk density and particle size distributions were characterized from streambank and channel deposit samples and used for volume to mass conversions and for comparison with other sediment sources.Average annual lateral migration rates ranged from 0.04 to 0.19 m/y, which represented an annual migration of 2.5% (0.9–4.4%) channel width across all study segments, suggesting that channel dimensions may be used as reasonable predictors of bank erosion rates. Gross bank erosion rates varied from 43 to 310 Mg/km/y (median = 114) and were positively correlated with drainage area. Measured deposition within channels accounted for an average of 46% (28–75%) of gross erosion, with deposition increasingly important in larger drainages. Legacy sediments accounted for 6–90% of bank erosion at individual study segments, represented about 60% of bank height at most exposures, and accounted for 57% (± 16%) of the measured gross erosion. Extrapolated results indicated that first- and second-order streams accounted for 62% (± 38%) of total streambank erosion from 1005 km2 of northern Baltimore County. After accounting for estimated redeposition, extrapolated net streambank sediment yields (72 Mg/km2/y) constituted 70% of estimated average Piedmont watershed yields (104 Mg/km2/y). The results suggest that streambank sediments are a relatively large source of sediment from Piedmont tributaries to the Chesapeake Bay.

Chemical speciation and ecological risk assessment of arsenic in marine sediments from Izmir Bay (Eastern Aegean Sea).

PubMed

Gonul, L T

2015-12-01

Total arsenic, arsenic(III) and (V), Fe, and Mn were measured in 17 surface sediment samples from Izmir Bay. The concentrations and ecological risk of As were characterized in the sediment affected by urban and agricultural activities. Total As ranged from 8.87 to 28.3 μg g(-1) dry weight (96.5-99.9 % as inorganic As). Distribution of total As and total As/Fe followed a different trend in sediments at all sampling sites. Arsenite (As(III)) was the most dominant form followed by As(V), while organic arsenic represented a minor constituent (0.03 to 3.49 %). The highest concentration of total As was observed at Gediz River estuary and exceeded lower threshold value (threshold effects level (TEL)). Due to the biological reduction of As(V) and abundance of Fe (oxyhydr)oxides in the sediments, most inorganic As in the Izmir Bay was present as As(III). Besides, the levels of As were >TEL and

Baseline geochemical data for stream sediment and surface water samples from Panther Creek, the Middle Fork of the Salmon River, and the Main Salmon River from North Fork to Corn Creek, collected prior to the severe wildfires of 2000 in central Idaho

USGS Publications Warehouse

Eppinger, Robert G.; Briggs, Paul H.; Brown, Zoe Ann; Crock, James G.; Meier, Allen; Theodorakos, Peter M.; Wilson, Stephen A.

2001-01-01

In 1996, the U.S. Geological Survey conducted a reconnaissance baseline geochemical study in central Idaho. The purpose of the baseline study was to establish a 'geochemical snapshot' of the area, as a datum for monitoring future change in the geochemical landscape, whether natural or human-induced. This report presents the methology, analytical results, and sample descriptions for water, sediment, and heavy-mineral concentrate samples collected during this geochemical investigation. In the summer of 2000, the Clear Creek, Little Pistol, and Shellrock wildfires swept across much of the area that was sampled. Thus, these data represent a pre-fire baseline geochemical dataset. A 2001 post- fire study is planned and will involve re-sampling of the pre-fire baseline sites, to allow for pre- and post-fire comparison.

Adaption of the microbial community to continuous exposures of multiple residual antibiotics in sediments from a salt-water aquacultural farm.

PubMed

Xi, Xiuping; Wang, Min; Chen, Yongshan; Yu, Shen; Hong, Youwei; Ma, Jun; Wu, Qian; Lin, Qiaoyin; Xu, Xiangrong

2015-06-15

Residual antibiotics from aquacultural farming may alter microbial community structure in aquatic environments in ways that may adversely or positively impact microbially-mediated ecological functions. This study investigated 26 ponds (26 composited samples) used to produce fish, razor clam and shrimp (farming and drying) and 2 channels (10 samples) in a saltwater aquacultural farm in southern China to characterize microbial community structure (represented by phospholipid fatty acids) in surface sediments (0-10 cm) with long-term exposure to residual antibiotics. 11 out of 14 widely-used antibiotics were quantifiable at μg kg(-1) levels in sediments but their concentrations did not statistically differ among ponds and channels, except norfloxacin in drying shrimp ponds and thiamphenicol in razor clam ponds. Concentrations of protozoan PLFAs were significantly increased in sediments from razor clam ponds while other microbial groups were similar among ponds and channels. Both canonical-correlation and stepwise-multiple-regression analyses on microbial community and residual antibiotics suggested that roxithromycin residuals were significantly related to shifts in microbial community structure in sediments. This study provided field evidence that multiple residual antibiotics at low environmental levels from aquacultural farming do not produce fundamental shifts in microbial community structure. Copyright © 2015 Elsevier B.V. All rights reserved.

Water-quality assessment of the eastern Iowa basins- nitrogen, phosphorus, suspended sediment, and organic carbon in surface water, 1996-98

USGS Publications Warehouse

Becher, Kent D.; Kalkhoff, Stephen J.; Schnoebelen, Douglas J.; Barnes, Kimberlee K.; Miller, Von E.

2001-01-01

Synoptic samples collected during low and high base flow had nitrogen, phosphorus, and organic-carbon concentrations that varied spatially and seasonally. Comparisons of water-quality data from six basic-fixed sampling sites and 19 other synoptic sites suggest that the water-quality data from basic-fixed sampling sites were representative of the entire study unit during periods of low and high base flow when most streamflow originates from ground water.

Stratigraphy and sedimentation of Mississippian Ste. Genevieve-Cedar Bluff interval, Southwestern Indiana

DOE Office of Scientific and Technical Information (OSTI.GOV)

Breedon, D.; Droste, J.B.; Murray, H.H.

1983-09-01

The Ste. Genevieve Limestone and Cedar Bluff Group of Mississippian age, both important sources of hydrocarbons in the Illinois basin, were traced from a subsurface stratigraphic section in White County, Illinois (described by Swan in 1963, across Gibson and Daviess Counties, Indiana, using electric logs and sample descriptions from 84 wells. The Ste. Genevieve Limestone is subdivided into four members and the Cedar Bluff Group into three formations. Six cross sections and nine isopach maps based on 300 wells show that these units comprise a succession of alternating fine- and coarse-grained carbonate rocks with only minor interruptions of sandstone andmore » shale. Two complete coarsening-upward cycles are apparent, and a third cycle is incomplete. Each cycle consists of a lower sequence of lime mudstones and wackestones, and an upper sequence of oolitic and skeletal grainstones. These cycles are the record of successive shoaling-upward cycles of sedimentation on a shallow marine platform. The lower mudstone-wackestone sequence represents deposition in a shallow subtidal environment, and the upper oolitic-skeletal grainstone unit represents development of oolite shoals and tidal channels in very shallow waters. Terrigenous clastic sediments brought into the basin by the Michigan river periodically encroached into the marine environment. Dolomitization of the fine-grained carbonate sediments is largely restricted to areas which are overlain by oolitic grainstones. In eastern Daviess County, indentification of the individual stratigraphic units in this interval is somewhat tenuous, but tracing the units from eastern Illinois into Indiana made correlation and identification of the individual stratigraphic units possible by using electric logs and sample descriptions.« less

Sediment deposition and production in SE-Asia seagrass meadows

NASA Astrophysics Data System (ADS)

Gacia, E.; Duarte, C. M.; Marbà, N.; Terrados, J.; Kennedy, H.; Fortes, M. D.; Tri, N. H.

2003-04-01

Seagrass meadows play an important role in the trapping and binding of particles in coastal sediments. Yet seagrass may also contribute to sediment production directly, through the deposition of detritus and also the deposition of the associated mineral particles. This study aims at estimating the contribution of different seagrass species growing across an extensive range of deposition to inorganic (carbonate and non-carbonate) and organic sediment production. Total daily deposition measured with sediment traps varied from 18.8 (±2.0) g DW m -2 d -1 in Silaqui (Philippines) to 681.1 (±102) g DW m -2 d -1 in Bay Tien (Vietnam). These measurements correspond to a single sampling event and represent sedimentation conditions during the dry season in SE-Asia coastal areas. Enhalus acoroides was the most common species in the seagrass meadows visited and, together with Thalassia hemprichii, was present at sites from low to very high deposition. Halodule uninervis and Cymodocea species were present in sites from low to medium deposition. The mineral load in seagrass leaves increased with age, and was high in E. acoroides because it had the largest and long-lived leaves (up to 417 mg calcium carbonate per leaf and 507 mg non-carbonate minerals per leaf) and low in H. uninervis with short-lived leaves (4 mg calcium carbonate per leaf and 2 mg non-carbonate minerals per leaf). In SE-Asia seagrass meadows non-carbonate minerals accumulate at slower rates than the production of calcium carbonate by the epiphytic community, consequently the final loads supported by fully grown leaves were, as average, lower than calcium carbonate loads. Our results show that organic and inorganic production of the seagrasses in SE-Asia represents a small contribution (maximum of 15%) of the materials sedimented on a daily base by the water column during the sampling period. The contribution of the carbonate fraction can be locally significant (i.e. 34% in Silaqui) in areas where the depositional flux is low, but is minor (<1%) in sites were siltation is significant (i.e. Umalagan and all the visited sites in Vietnam).

Improving understanding of mixed-land-use watershed suspended sediment regimes: Mechanistic progress through high-frequency sampling.

PubMed

Kellner, Elliott; Hubbart, Jason A

2017-11-15

Given the importance of suspended sediment to biogeochemical functioning of aquatic ecosystems, and the increasing concern of mixed-land-use effects on pollutant loading, there is an urgent need for research that quantitatively characterizes spatiotemporal variation of suspended sediment dynamics in contemporary watersheds. A study was conducted in a representative watershed of the central United States utilizing a nested-scale experimental watershed design, including five gauging sites (n=5) partitioning the catchment into five sub-watersheds. Hydroclimate stations at gauging sites were used to monitor air temperature, precipitation, and stream stage at 30-min intervals during the study (Oct. 2009-Feb. 2014). Streamwater grab samples were collected four times per week, at each site, for the duration of the study (Oct. 2009-Feb. 2014). Water samples were analyzed for suspended sediment using laser particle diffraction. Results showed significant differences (p<0.05) between monitoring sites for total suspended sediment concentration, mean particle size, and silt volume. Total concentration and silt volume showed a decreasing trend from the primarily agricultural upper watershed to the urban mid-watershed, and a subsequent increasing trend to the more suburban lower watershed. Conversely, mean particle size showed an opposite spatial trend. Results are explained by a combination of land use (e.g. urban stormwater dilution) and surficial geology (e.g. supply-controlled spatial variation of particle size). Correlation analyses indicated weak relationships with both hydroclimate and land use, indicating non-linear sediment dynamics. Suspended sediment parameters displayed consistent seasonality during the study, with total concentration decreasing through the growing season and mean particle size inversely tracking air temperature. Likely explanations include vegetation influences and climate-driven weathering cycles. Results reflect unique observations of spatiotemporal variation of suspended sediment particle size class. Such information is crucial for land and water resource managers working to mitigate aquatic ecosystem degradation and improve water resource sustainability in mixed-land-use watersheds globally. Copyright © 2017 Elsevier B.V. All rights reserved.

A field investigation of the relationship between zinc and acid volatile sulfide concentrations in freshwater sediments

USGS Publications Warehouse

Ankley, Gerald T.; Liber, Karsten; Call, Daniel J.; Markee, Thomas P.; Canfield, Timothy J.; Ingersoll, Christopher G.

1996-01-01

Understanding relationships between cationic metals such as cadmium, copper, nickel, lead and zinc, and amorphous iron sulfides, measured as acid volatile sulfide (AVS), is key to predicting metal bioavailability and toxicity insediments. The objective of the present study was to assess seasonal and spatial variations of AVS in freshwater sediments contaminated with zinc. Sediments were sampled from three streams with varying levels of zinc contamination at two different times, March and June of 1995, representing cold- and warm-weather situations. Interstitial (pore) water concentrations of zinc, and solid phase concentrations of AVS and zinc were measured in surficial and deep sediment horizons. Toxicity tests (10-d) with the amphipodHyalella azteca were conducted using intact cores. Sediment zinc concentrations from six sites within the primary test stream differed by about five-fold, and also varied seasonally. Acid volatile sulfide concentrations were generally lower than those of zinc, and pore water zinc concentrations typically were elevated. There was a positive correlation between solid-phase AVS and zinc concentrations, suggesting that the system was dominated by zinc, as opposed to iron sulfides. In contrast to expectations arising from some studies of seasonal variations of AVS in iron-dominated systems, AVS concentrations were smaller in June than in March. However, this was likely due to a major storm event and associated sediment scouring before the June sampling, rather than to seasonal processes related to variations in temperature and dissolved oxygen. Based upon an indirect analysis of depth variations in AVS, there was some indication that zinc sulfide might be less prone to oxidation than iron sulfide. There was a strong correlation between toxicity of the sediment samples toH. azteca and interstitial water concentrations of zinc; however, the possible contribution of other contaminants to sediment toxicity cannot be dismissed.

Chiral signatures of chlordanes indicate changing sources to the atmosphere over the past 30 years

NASA Astrophysics Data System (ADS)

Bidleman, Terry F.; Wong, Fiona; Backe, Cecilia; Södergren, Anders; Brorström-Lundén, Eva; Helm, Paul A.; Stern, Gary A.

2004-11-01

Chlordane was used as an insecticide for half a century until its withdrawal from the world market in 1997. Trans- and cis-chlordane (TC, CC) are racemic in the technical product, but undergo enantioselective degradation in soil to leave nonracemic residues. In most cases, the (+) enantiomer of TC and the (-) enantiomer of CC are depleted, leading to enantiomer fractions, EF = (+) / [ (+) + (-) ], that are < 0.500 for TC and > 0.500 for CC. Nonracemic EFs of TC and CC, showing the same degradation preference as soils, were found in 1998-2001 air samples from stations in Arctic Canada and Finland, and on the west coast of Sweden. Environmental samples representing different time periods of chlordane history were also examined in: (a) archived atmospheric deposition samples collected in Sweden, Slovakia and Iceland in 1971-1973, (b) soils from southern Sweden sampled in 2001 and (c) a laminated lake sediment core from the Canadian Arctic representing ∼50 years of accumulation. TC and CC were racemic or nearly so in the historical atmospheric deposition samples and nonracemic in the Swedish soils. The EF of TC in the dated lake sediment core decreased from nearly racemic in the past to nonracemic in recent times. These observations suggest that sources of chlordane to the atmosphere have changed over time and are now influenced to a greater extent by emission from soils.

Reconnaissance exploration geochemistry in the central Brooks Range, northern Alaska: Implications for exploration of sediment-hosted zinc-lead-silver deposits

USGS Publications Warehouse

Kelley, K.D.; Kelley, D.L.

1992-01-01

A reconnaissance geochemical survey was conducted in the southern Killik River quadrangle, central Brooks Range, northern Alaska. The Brooks Range lies within the zone of continuous permafrost which may partially inhibit chemical weathering and oxidation. The minus 30-mesh and nonmagnetic heavy-mineral concentrate fractions of sediment samples were chosen as the sample media for the survey so that mechanical rather than chemical dispersion patterns would be enhanced. A total of 263 sites were sampled within the southern half of the Killik River quadrangle at an average sample density of approximately one sample per 12 km2. All samples were submitted for multi-element analyses. In the western and central Brooks Range, several known sediment-hosted Zn-Pb-Ag(-Ba) deposits occur within a belt of Paleozoic rocks of the Endicott Mountains allochthon. Exploration for this type of deposit in the Brook Range is difficult, due to the inherently high background values for Ba, Zn and Pb in shale and the common occurrence of metamorphic quartz-calcite veins, many of which contain traces of sulfide minerals. Stream sediments derived from these sources produce numerous geochemical anomalies which are not necessarily associated with significant mineralization. R-mode factor analysis provides a means of distinguishing between element associations related to lithology and those related to possible mineralization. Factor analysis applied to the multi-element data from the southern Killik River quadrangle resulted in the discovery of two additional Zn-Pb-Ag mineral occurrences of considerable areal extent which are 80-100 km east of any previously known deposit. These have been informally named the Kady and Vidlee. Several lithogeochemical element associations, or factors, and three factors which represent sulfide mineralization were identified: Ag-Pb-Zn (galena and sphalerite) and Fe-Ni-Co-Cu (pyrite ?? chalcopyrite) in the concentrate samples and Cd-Zn-Pb-As-Mn in the sediment samples. The distribution of high scores for each individual mineralization factor outlined several relatively large (200-250 km2) geochemically favorable areas. When the distribution of high scores for all three factors were superimposed, samples characterized by high scores for one or both of the concentrate mineralization factors and the mineralization factor in sediments define basin areas of approximately 48 and 64 km2 surrounding Kady and Vidlee, respectively. ?? 1992.

Sedimentation and occurrence and trends of selected chemical constituents in bottom sediment of 10 small reservoirs, Eastern Kansas

USGS Publications Warehouse

Juracek, Kyle E.

2004-01-01

Many municipalities in Kansas rely on small reservoirs as a source of drinking water and for recreational activities. Because of their significance to the community, management of the reservoirs and the associated basins is important to protect the reservoirs from degradation. Effective reservoir management requires information about water quality, sedimentation, and sediment quality. A combination of bathymetric surveying and bottom-sediment coring during 2002 and 2003 was used to investigate sediment deposition and the occurrence of selected nutrients (total nitrogen and total phosphorus), organic and total carbon, 26 trace elements, 15 organochlorine compounds, and 1 radionuclide in the bottom sediment of 10 small reservoirs in eastern Kansas. Original reservoir water-storage capacities ranged from 23 to 5,845 acre-feet. The mostly agricultural reservoir basins range in area from 0.6 to 14 square miles. The mean annual net volume of deposited sediment, estimated separately for several of the reservoirs, ranged from about 43,600 to about 531,000 cubic feet. The estimated mean annual net mass of deposited sediment ranged from about 1,360,000 to about 23,300,000 pounds. The estimated mean annual net sediment yields from the reservoir basins ranged from about 964,000 to about 2,710,000 pounds per square mile. Compared to sediment yield estimates provided by a statewide study published in 1965, the estimates determined in this study differed substantially and were typically smaller. A statistically significant positive correlation was determined for the relation between sediment yield and mean annual precipitation. Nutrient concentrations in the bottom sediment varied substantially among the 10 reservoirs. Median total nitrogen concentrations ranged from 1,400 to 3,700 milligrams per kilogram. Median total phosphorus concentrations ranged from 550 to 1,300 milligrams per kilogram. A statistically significant positive trend (that is, nutrient concentration increased toward the top of the sediment core) was indicated in one reservoir for total nitrogen and in two reservoirs for total phosphorus. Also, a possible positive trend for total nitrogen was indicated in two other reservoirs. These trends in nutrient concentrations may be related to a statewide increase in fertilizer use. Alternatively, the trends may be indicative of diagenesis (that is, postdepositional changes in the sediment caused by various processes including decomposition). Nutrient loads and yields also varied substantially among the five reservoirs for which loads and yields were estimated. Estimated mean annual net loads of total nitrogen deposited in the bottom sediment ranged from 4,080 to 49,100 pounds. Estimated mean annual net loads of total phosphorus deposited in the bottom sediment ranged from 1,120 to 20,800 pounds. Estimated mean annual net yields of total nitrogen from the basins ranged from 2,210 to 6,800 pounds per square mile. Estimated mean annual net yields of total phosphorus from the basins ranged from 598 to 2,420 pounds per square mile. Compared to nonenforceable sediment-quality guidelines adopted by the U.S. Environmental Protection Agency, bottom-sediment concentrations of arsenic, chromium, copper, and nickel in samples from all 10 reservoirs typically exceeded the threshold-effects levels (TELs) but were less than the probable-effects levels (PELs). TELs represent the concentrations above which toxic biological effects occasionally occur in aquatic organisms, whereas PELs represent the concentrations above which toxic biological effects usually or frequently occur. Concentrations of cadmium, lead, and zinc exceeded the TELs but were less than the PELs in sediment samples from about one-half of the reservoirs and were less than the TELs in samples from the remaining reservoirs. Mercury concentrations were less than the TEL (information only available for four reservoirs). Silver was not detected in the bottom sediment fro

Sediment source fingerprinting as an aid to catchment management: A review of the current state of knowledge and a methodological decision-tree for end-users.

PubMed

Collins, A L; Pulley, S; Foster, I D L; Gellis, A; Porto, P; Horowitz, A J

2017-06-01

The growing awareness of the environmental significance of fine-grained sediment fluxes through catchment systems continues to underscore the need for reliable information on the principal sources of this material. Source estimates are difficult to obtain using traditional monitoring techniques, but sediment source fingerprinting or tracing procedures, have emerged as a potentially valuable alternative. Despite the rapidly increasing numbers of studies reporting the use of sediment source fingerprinting, several key challenges and uncertainties continue to hamper consensus among the international scientific community on key components of the existing methodological procedures. Accordingly, this contribution reviews and presents recent developments for several key aspects of fingerprinting, namely: sediment source classification, catchment source and target sediment sampling, tracer selection, grain size issues, tracer conservatism, source apportionment modelling, and assessment of source predictions using artificial mixtures. Finally, a decision-tree representing the current state of knowledge is presented, to guide end-users in applying the fingerprinting approach. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

Runoff of particle bound pollutants from urban impervious surfaces studied by analysis of sediments from stormwater traps.

PubMed

Jartun, Morten; Ottesen, Rolf Tore; Steinnes, Eiliv; Volden, Tore

2008-06-25

Runoff sediments from 68 small stormwater traps around the harbor of urban Bergen, Norway, were sampled and the concentrations of polychlorinated biphenyls (PCBs), polycyclic aromatic hydrocarbons (PAHs), heavy metals, and total organic carbon (TOC) were determined in addition to grain size. Our study provides empirical data from a large area in the interface between the urban and marine environment, studying the active transport of pollutants from land-based sources. The results of the analyses clearly demonstrate the importance of the urban environment representing a variety of contamination sources, and that stormwater runoff is an important dispersion mechanism of toxic pollutants. The concentrations of different pollutants in urban runoff sediments show that there are several active pollution sources supplying the sewage systems with PCBs, PAHs and heavy metals such as lead (Pb), zinc (Zn) and cadmium (Cd). The concentration of PCB7 in the urban runoff sediments ranged between < 0.0004 and 0.704 mg/kg. For PAH16, the concentration range was < 0.2-80 mg/kg, whereas the concentration ranges of Pb, Zn and Cd were 9-675, 51.3-4670 and 0.02-11.1 mg/kg respectively. Grain size distribution in 21 selected samples varied from a median particle diameter of 13 to 646 microm. However, several samples had very fine-grained particles even up to the 90 percentile of the samples, making them available for stormwater dispersion in suspended form. The sampling approach proposed in this paper will provide environmental authorities with a useful tool to examine ongoing urban contamination of harbors and similar recipients.

Variations in sediment texture on the northern Monterey Bay National Marine Sanctuary continental shelf

USGS Publications Warehouse

Edwards, B.D.

2002-01-01

The storm-protected continental shelf of Monterey Bay, part of the Monterey Bay National Marine Sanctuary, north-central California, is subject to abundant, episodic sediment input from fluvial sources. North of Monterey Bay, conditions of reduced sediment supply combined with the exposed nature of the shelf provide an effective laboratory for studying the contrasting effects of storm- versus fluvial-dominated conditions on modern sedimentation. Textural analyses performed on surface sediment samples collected from more than 380 box cores and MultiCores??? document the existence of a clearly defined mud belt occupying the mid-shelf throughout the region. Inshore sands combined with these mid-shelf muds represent deposits from modern sedimentation processes. In Monterey Bay, where episodic fluvial input from winter storms dominates sedimentation, the mid-shelf mud belt extends across the shelf to the shelf break. North of Monterey Bay, where sediment loads are reduced and both oceanographic and storm processes dominate, the mid-shelf mud belt is bordered by relict sediments occupying the outer shelf. In the study area, mass accumulation rates established by radiochemical studies support the contention that storm-induced along-shelf processes result in northward transport of sediment within the mud belt. The continuity of transport, however, is interrupted by topographic highs which are barriers or inhibitors to sediment transport created by wrench-style tectonics associated with the San Andreas fault system.

History and evaluation of national-scale geochemical data sets for the United States

USGS Publications Warehouse

Smith, David B.; Smith, Steven M.; Horton, John D.

2013-01-01

Six national-scale, or near national-scale, geochemical data sets for soils or stream sediments exist for the United States. The earliest of these, here termed the ‘Shacklette’ data set, was generated by a U.S. Geological Survey (USGS) project conducted from 1961 to 1975. This project used soil collected from a depth of about 20 cm as the sampling medium at 1323 sites throughout the conterminous U.S. The National Uranium Resource Evaluation Hydrogeochemical and Stream Sediment Reconnaissance (NURE-HSSR) Program of the U.S. Department of Energy was conducted from 1975 to 1984 and collected either stream sediments, lake sediments, or soils at more than 378,000 sites in both the conterminous U.S. and Alaska. The sampled area represented about 65% of the nation. The Natural Resources Conservation Service (NRCS), from 1978 to 1982, collected samples from multiple soil horizons at sites within the major crop-growing regions of the conterminous U.S. This data set contains analyses of more than 3000 samples. The National Geochemical Survey, a USGS project conducted from 1997 to 2009, used a subset of the NURE-HSSR archival samples as its starting point and then collected primarily stream sediments, with occasional soils, in the parts of the U.S. not covered by the NURE-HSSR Program. This data set contains chemical analyses for more than 70,000 samples. The USGS, in collaboration with the Mexican Geological Survey and the Geological Survey of Canada, initiated soil sampling for the North American Soil Geochemical Landscapes Project in 2007. Sampling of three horizons or depths at more than 4800 sites in the U.S. was completed in 2010, and chemical analyses are currently ongoing. The NRCS initiated a project in the 1990s to analyze the various soil horizons from selected pedons throughout the U.S. This data set currently contains data from more than 1400 sites. This paper (1) discusses each data set in terms of its purpose, sample collection protocols, and analytical methods; and (2) evaluates each data set in terms of its appropriateness as a national-scale geochemical database and its usefulness for national-scale geochemical mapping.

Dissolved oxygen saturation controls PAH biodegradation in freshwater estuary sediments.

PubMed

Boyd, T J; Montgomery, M T; Steele, J K; Pohlman, J W; Reatherford, S R; Spargo, B J; Smith, D C

2005-02-01

Polycyclic aromatic hydrocarbons (PAHs) are common contaminants in terrestrial and aquatic environments and can represent a significant constituent of the carbon pool in coastal sediments. We report here the results of an 18-month seasonal study of PAH biodegradation and heterotrophic bacterial production and their controlling biogeochemical factors from 186 sediment samples taken in a tidally influenced freshwater estuary. For each sampling event, measurements were averaged from 25-45 stations covering approximately 250 km(2). There was a clear relationship between bacterial production and ambient temperature, but none between production and bottom water dissolved oxygen (DO) % saturation or PAH concentrations. In contrast with other studies, we found no effect of temperature on the biodegradation of naphthalene, phenanthrene, or fluoranthene. PAH mineralization correlated with bottom water DO saturation above 70% (r(2) > 0.99). These results suggest that the proportional utilization of PAH carbon to natural organic carbon is as much as three orders of magnitude higher during cooler months, when water temperatures are lower and DO % saturation is higher. Infusion of cooler, well-oxygenated water to the water column overlying contaminated sediments during the summer months may stimulate PAH metabolism preferentially over non-PAH organic matter.

Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert.

PubMed

Rasuk, Maria Cecilia; Fernández, Ana Beatriz; Kurth, Daniel; Contreras, Manuel; Novoa, Fernando; Poiré, Daniel; Farías, María Eugenia

2016-01-01

The Atacama Desert has extreme environmental conditions that allow the development of unique microbial communities. The present paper reports the bacterial diversity of microbial mats and sediments and its mineralogical components. Some physicochemical conditions of the water surrounding these ecosystems have also been studied trying to determine their influence on the diversity of these communities. In that way, mats and sediments distributed among different hypersaline lakes located in salt flats of the Atacama Desert were subjected to massive parallel sequencing of the V4 region of the 16S rRNA genes of Bacteria. A higher diversity in sediment than in mat samples have been found. Lakes that harbor microbial mats have higher salinity than lakes where mats are absent. Proteobacteria and/or Bacteroidetes are the major phyla represented in all samples. An interesting item is the finding of a low proportion or absence of Cyanobacteria sequences in the ecosystems studied, suggesting the possibility that other groups may be playing an essential role as primary producers in these extreme environments. Additionally, the large proportion of 16S rRNA gene sequences that could not be classified at the level of phylum indicates potential new phyla present in these ecosystems.

The influence of human settlement on the distribution and diversity of iron-oxidizing bacteria belonging to the Gallionellaceae in tropical streams

PubMed Central

Reis, Mariana P.; Ávila, Marcelo P.; Costa, Patrícia S.; Barbosa, Francisco A. R.; Laanbroek, Hendrikus J.; Chartone-Souza, Edmar; Nascimento, Andréa M. A.

2014-01-01

Among the neutrophilic iron-oxidizing bacteria (FeOB), Gallionella is one of the most abundant genera in freshwater environments. By applying qPCR and DGGE based on 16S rRNA gene-directed primers targeting Gallionellaceae, we delineated the composition and abundance of the Gallionellaceae-related FeOB community in streams differentially affected by metal mining, and explored the relationships between these community characteristics and environmental variables. The sampling design included streams historically impacted by mining activity and a non-impacted stream. The sediment and water samples harbored a distinct community represented by Gallionella, Sideroxydans, and Thiobacillus species. Sequences affiliated with Gallionella were exclusively observed in sediments impacted by mining activities, suggesting an adaptation of this genus to these environments. In contrast, Sideroxydans-related sequences were found in all sediments including the mining impacted locations. The highest and lowest relative frequencies of Gallionellaceae-related FeOB were associated with the lowest and highest concentrations of Fe, respectively. The data enclosed here clearly show distinct species-specific ecological niches, with Gallionella species dominating in sediments impacted by anthropogenic activities over Sideroxydans species. PMID:25505456

Shipboard magnetic field "noise" reveals shallow heavy mineral sediment concentrations in Chesapeake Bay

USGS Publications Warehouse

Shah, Anjana K.; Vogt, Peter R.; Rosenbaum, Joseph G.; Newell, Wayne L.; Cronin, Thomas M.; Willard, Debra A.; Hagen, Rick A.; Brozena, John; Hofstra, Albert

2012-01-01

Shipboard magnetic field data collected over Chesapeake Bay exhibit low-amplitude, short-wavelength anomalies that most likely indicate shallow concentrations of heavy mineral sediments. Piston core layers and black sand beach samples exhibit enhanced magnetic susceptibilities and carry remanent magnetization, with mineralogical analyses indicating ilmenite and trace magnetite and/or maghemite and hematite. The anomalies are subtle and would be filtered as noise using traditional approaches, but can instead be highlighted using spectral methods, thus providing nearly continuous coverage along survey tracks. The distribution of the anomalies provides constraints on relevant sorting mechanisms. Comparisons to sonar data and previous grab samples show that two of three areas surveyed exhibit short-wavelength anomalies that are clustered over sand-covered areas, suggesting initial sorting through settling mechanisms. This is supported by a correlation between core magnetic susceptibility and grain size. Near the Choptank River, where sediment resuspension is wave-dominated, anomalies show a sharp decrease with seafloor depth that cannot be explained by signal attenuation alone. In Pocomoke Sound, where both tidal currents and wave-action impact sediment resuspension, anomalies show a more gradual decrease with depth. Near the mouth of the bay, where there is a higher influx of sediments from the continental shelf, short-wavelength anomalies are isolated and do not appear to represent heavy mineral sand concentrations. These combined observations suggest the importance of further sorting by erosional processes in certain parts of the bay. Additionally, comparisons of these data to cores sampling pre-Holocene sediments suggest that the sorting of heavy minerals in higher energy, shallow water environments provides a mechanism for correlations between core magnetic susceptibility and sea-level changes.

The impacts of tracer selection and corrections for organic matter and particle size on the results of quantitative sediment fingerprinting. A case study from the Nene basin, UK.

NASA Astrophysics Data System (ADS)

Pulley, Simon; Ian, Foster; Paula, Antunes

2014-05-01

In recent years, sediment fingerprinting methodologies have gained widespread adoption when tracing sediment provenance in geomorphological research. A wide variety of tracers have been employed in the published literature, with corrections for particle size and organic matter applied when the researcher judged them necessary. This paper aims to explore the errors associated with tracer use by a comparison of fingerprinting results obtained using fallout and lithogenic radionuclides, geochemical, and mineral magnetic tracers in a range of environments located in the Nene basin, UK. Specifically, fingerprinting was undertaken on lake, reservoir and floodplain sediment cores, on actively transported suspended sediment and on overbank and channel bed sediment deposits. Tracer groups were investigated both alone and in combination to determine the differences between their sediment provenance predictions and potential causes of these differences. Additionally, simple organic and particle size corrections were applied to determine if they improve the agreement between the tracer group predictions. Key results showed that when fingerprinting contributions from channel banks to actively transported or recently deposited sediments the tracer group predictions varied by 24% on average. These differences could not be clearly attributed to changes in the sediment during erosion or transport. Instead, the most likely cause of differences was the pre-existing spatial variability in tracer concentrations within sediment sources, combined with highly localised erosion. This resulted in the collected sediment source samples not being representative of the actual sediment sources. Average differences in provenance predictions between the different tracer groups in lake, reservoir and floodplain sediment cores were lowest in the reservoir core at 19% and highest in some floodplain cores, with differences in predictions in excess of 50%. In these latter samples organic enrichment of the sediment, selective transport of fine particles and post-depositional chemical changes to the sediment were determined to be the likely cause of the differences. It was determined that organic and particle size corrections made the differences between tracer groups larger in most cases, although differences between tracer group predictions were reduced in two of the four floodplain cores.

Determining Sediment Sources in the Anacostia River Watershed

NASA Astrophysics Data System (ADS)

Devereux, O. H.; Needelman, B. A.; Prestegaard, K. L.; Gellis, A. C.; Ritchie, J. C.

2005-12-01

Suspended sediment is a water-quality problem in the Chesapeake Bay. This project is designed to identify sediment sources in an urban watershed, the Northeast Branch of the Anacostia River (in Washington, D.C. and Maryland - drainage area = 188.5 km2), which delivers sediment directly to the Bay. This watershed spans two physiographic regions - the Piedmont and Coastal Plain. Bank sediment and suspended-sediment deposits were characterized using the following techniques: radionuclide (Cs-137) analysis by gamma ray spectrometry, trace-element analysis by ICP-MS, clay mineralogy by XRD, and particle-size analysis by use of a laser particle-size analyzer. Sampling of bank and suspended sediment was designed to: a) characterize tributary inputs from both Piedmont and Coastal Plain sources, and b) differentiate tributary inputs from bank erosion along the main stem of the Northeast Branch. Thirteen sample sites were chosen that represent tributary source areas of each physiographic region and the main stem where mixing occurs. Surface samples of the banks were compared to overbank deposits from a ten year storm (a proxy for the suspended sediments). Fingerprint components are selected from these data. Cesium-137 concentrations were analyzed for bank and overbank deposits for each physiographic region. No clear differences were seen between the two physiographic regions. Significant differences were observed between upland tributaries and the main stem of the Anacostia River. The average activity of Cs-137 for the tributaries was 5.4 bq/kg and the average for the main stem was 1.1 bq/kg. This suggests that there is significant erosion and storage of sediment in the tributaries. The low activity from Cs-137 in the main stem suggests a lack of storage of sediment along the main stem of the river. For the trace-element data, we focused on elements that showed significant variation among the sites. For the bank sediment, these elements include: Sr, V, Y, Ce, and Nd. For the overbank deposits, Zr, V, Ba, Ce, and Cu showed significant variability. In both physiographic regions, Pb is primarily found in bank deposits, while Cu is found in higher concentrations in overbank deposits. The Cs-137 data clearly showed the erosion and storage of sediment patterns in the watershed. The trace-element data indicate that stream banks may be differentiated from overbank deposits.

The behavioural characteristics of sediment properties and their implications for sediment fingerprinting as an approach for identifying sediment sources in river basins

NASA Astrophysics Data System (ADS)

Koiter, A. J.; Owens, P. N.; Petticrew, E. L.; Lobb, D. A.

2013-10-01

Sediment fingerprinting is a technique that is increasingly being used to improve the understanding of sediment dynamics within river basins. At present, one of the main limitations of the technique is the ability to link sediment back to their sources due to the non-conservative nature of many of the sediment properties. The processes that occur between the sediment source locations and the point of collection downstream are not well understood or quantified and currently represent a black-box in the sediment fingerprinting approach. The literature on sediment fingerprinting tends to assume that there is a direct connection between sources and sinks, while much of the broader environmental sedimentology literature identifies that numerous chemical, biological and physical transformations and alterations can occur as sediment moves through the landscape. The focus of this paper is on the processes that drive particle size and organic matter selectivity and biological, geochemical and physical transformations and how understanding these processes can be used to guide sampling protocols, fingerprint selection and data interpretation. The application of statistical approaches without consideration of how unique sediment fingerprints have developed and how robust they are within the environment is a major limitation of many recent studies. This review summarises the current information, identifies areas that need further investigation and provides recommendations for sediment fingerprinting that should be considered for adoption in future studies if the full potential and utility of the approach are to be realised.

Controlling suspended samplers by programmable calculator and interface circuitry

Treesearch

Rand E. Eads; Mark R. Boolootian

1985-01-01

A programmable calculator connected to an interface circuit can control automatic samplers and record streamflow data. The circuit converts a voltage representing water stage to a digital signal. The sampling program logs streamflow data when there is a predefined deviation from a linear trend in the water elevation. The calculator estimates suspended sediment...

Isotopic identification of natural vs. anthropogenic lead sources in marine sediments from the inner Ría de Vigo (NW Spain).

PubMed

Álvarez-Iglesias, P; Rubio, B; Millos, J

2012-10-15

San Simón Bay, the inner part of the Ría de Vigo (NW Spain), an area previously identified as highly polluted by Pb, was selected for the application of Pb stable isotope ratios as a fingerprinting tool in subtidal and intertidal sediment cores. Lead isotopic ratios were determined by inductively coupled plasma mass spectrometry on extracts from bulk samples after total acid digestion. Depth-wise profiles of (206)Pb/(207)Pb, (206)Pb/(204)Pb, (207)Pb/(204)Pb, (208)Pb/(204)Pb and (208)Pb/(207)Pb ratios showed, in general, an upward decrease for both intertidal and subtidal sediments as a consequence of the anthropogenic activities over the last century, or centuries. Waste channel samples from a nearby ceramic factory showed characteristic Pb stable isotope ratios different from those typical of coal and petrol. Natural isotope ratios from non-polluted samples were established for the study area, differentiating sediments from granitic or schist-gneiss sources. A binary mixing model employed on the polluted samples allowed estimating the anthropogenic inputs to the bay. These inputs represented between 25 and 98% of Pb inputs in intertidal samples, and 9-84% in subtidal samples, their contributions varying with time. Anthropogenic sources were apportioned according to a three-source model. Coal combustion-related emissions were the main anthropogenic source Pb to the bay (60-70%) before the establishment of the ceramic factory in the area (in the 1970s) which has since constituted the main source (95-100%), followed by petrol-related emissions. The Pb inputs history for the intertidal area was determined for the 20th century, and, for the subtidal area, the 19th and 20th centuries. Copyright © 2012 Elsevier B.V. All rights reserved.

Areal distribution and concentration of contaminants of concern in surficial streambed and lakebed sediments, Lake St. Clair and tributaries, Michigan, 1990-2003

USGS Publications Warehouse

Rachol, Cynthia M.; Button, Daniel T.

2006-01-01

As part of the Lake St. Clair Regional Monitoring Project, the U.S. Geological Survey evaluated data collected from surficial streambed and lakebed sediments in the Lake Erie-Lake St. Clair drainages. This study incorporates data collected from 1990 through 2003 and focuses primarily on the U.S. part of the Lake St. Clair Basin, including Lake St. Clair, the St. Clair River, and tributaries to Lake St. Clair. Comparable data from the Canadian part of the study area are included where available. The data are compiled into 4 chemical classes and consist of 21 compounds. The data are compared to effects-based sediment-quality guidelines, where the Threshold Effect Level and Lowest Effect Level represent concentrations below which adverse effects on biota are not expected and the Probable Effect Level and Severe Effect Level represent concentrations above which adverse effects on biota are expected to be frequent.Maps in the report show the spatial distribution of the sampling locations and illustrate the concentrations relative to the selected sediment-quality guidelines. These maps indicate that sediment samples from certain areas routinely had contaminant concentrations greater than the Threshold Effect Concentration or Lowest Effect Level. These locations are the upper reach of the St. Clair River, the main stem and mouth of the Clinton River, Big Beaver Creek, Red Run, and Paint Creek. Maps also indicated areas that routinely contained sediment contaminant concentrations that were greater than the Probable Effect Concentration or Severe Effect Level. These locations include the upper reach of the St. Clair River, the main stem and mouth of the Clinton River, Red Run, within direct tributaries along Lake St. Clair and in marinas within the lake, and within the Clinton River headwaters in Oakland County.Although most samples collected within Lake St. Clair were from sites adjacent to the mouths of its tributaries, samples analyzed for trace-element concentrations were collected throughout the lake. The distribution of trace-element concentrations corresponded well with the results of a two-dimensional hydrodynamic model of flow patterns from the Clinton River into Lake St. Clair. The model was developed independent from the bed sediment analysis described in this report; yet it showed a zone of deposition for outflow from the Clinton River into Lake St. Clair that corresponded well with the spatial distribution of trace-element concentrations. This zone runs along the western shoreline of Lake St. Clair from L'Anse Creuse Bay to St. Clair Shores, Michigan and is reflected in the samples analyzed for mercury and cadmium.Statistical summaries of the concentration data are presented for most contaminants, and selected statistics are compared to effects-based sediment-quality guidelines. Summaries were not computed for dieldrin, chlordane, hexachlorocyclohexane, lindane, and mirex because insufficient data are available for these contaminants. A statistical comparison showed that the median concentration for hexachlorobenzene, anthracene, benz[a]anthracene, chrysene, and pyrene are greater than the Threshold Effect Concentration or Lowest Effect Level.Probable Effect Concentration Quotients provide a mechanism for comparing the concentrations of contaminant mixtures against effects-based biota data. Probable Effect Concentration Quotients were calculated for individual samples and compared to effects-based toxicity ranges. The toxicity-range categories used in this study were nontoxic (quotients < 0.5) and toxic (quotients > 0.5). Of the 546 individual samples for which Probable Effect Concentration Quotients were calculated, 469 (86 percent) were categorized as being nontoxic and 77 (14 percent) were categorized as being toxic. Bed-sediment samples with toxic Probable Effect Concentration Quotients were collected from Paint Creek, Galloway Creek, the main stem of the Clinton River, Big Beaver Creek, Red Run, Clinton River towards the mouth, Lake St. Clair along the western shore, and the St. Clair River near Sarnia.

Inorganic geochemistry of surface sediments of the Ebro shelf and slope, northwestern Mediterranean

USGS Publications Warehouse

Gardner, J.V.; Dean, W.E.; Alonso, B.

1990-01-01

Distributions of major, minor, and trace elements in surface sediment of the continental shelf and upper slope of the northeastern Spanish continental margin reflect the influences of discharge from the Ebro River and changes in eustatic sea levels. Multivariate factor analysis of sediment geochemistry was used to identify five groupings of samples (factors) on the shelf and slope. The first factor is an aluminosilicate factor that represents detrital clastic material. The second factor is a highly variable amount of excess SiO2 and probably represents a quartz residuum originating from winnowing of relict detrital sediments. A carbonate factor (Factor 3) has no positive correlation with other geochemical parameters but is associated with the sand-size fraction. The carbonate in these sediments consists of a mixture of biogenic calcite and angular to subangular detrital grains. Organic carbon is associated with the aluminosilicate factor (Factor 1) but also factors out by itself (Factor 4); this suggests that there may be two sources of organic matter, terrestrial and marine. The fifth factor comprises upper slope sediments that contain high concentrations of manganese. The most likely explanation for these high manganese concentrations is precipitation of Mn oxyhydroxides at the interface between Mn-rich, oxygen-deficient, intermediate waters and oxygenated surface waters. During eustatic low sea levels of the glacial Pleistocene, the Ebro Delta built across the outer continental shelf and deposited sediment with fairly high contents of organic carbon and continental components. The period of marine transgression from eustatic low (glacial) to eustatic high (interglacial) sea levels was characterized by erosion of the outer shelf delta and surficial shelf sediments and the transport of sediment across the slope within numerous canyons. Once eustatic high sea level was reached, delta progradation resumed on the inner shelf. Today, coarse-grained sediment (silt and sand) is transported to the continental shelf by Ebro River and is distributed along the inner shelf by currents generated by dominant northeasterly winds. Clay-size material is deposited on the mid- and outer-shelf. However, erosion and delta progradation during the last glacial period, and fine-grained Holocene sedimentation, have probably produced a distribution of sediment on a diachronous surface. ?? 1990.

Design and methods of the Midwest Stream Quality Assessment (MSQA), 2013

USGS Publications Warehouse

Garrett, Jessica D.; Frey, Jeffrey W.; Van Metre, Peter C.; Journey, Celeste A.; Nakagaki, Naomi; Button, Daniel T.; Nowell, Lisa H.

2017-10-18

During 2013, the U.S. Geological Survey (USGS) National Water-Quality Assessment Project (NAWQA), in collaboration with the USGS Columbia Environmental Research Center, the U.S. Environmental Protection Agency (EPA) National Rivers and Streams Assessment (NRSA), and the EPA Office of Pesticide Programs assessed stream quality across the Midwestern United States. This Midwest Stream Quality Assessment (MSQA) simultaneously characterized watershed and stream-reach water-quality stressors along with instream biological conditions, to better understand regional stressor-effects relations. The MSQA design focused on effects from the widespread agriculture in the region and urban development because of their importance as ecological stressors of particular concern to Midwest region resource managers.A combined random stratified selection and a targeted selection based on land-use data were used to identify and select sites representing gradients in agricultural intensity across the region. During a 14-week period from May through August 2013, 100 sites were selected and sampled 12 times for contaminants, nutrients, and sediment. This 14-week water-quality “index” period culminated with an ecological survey of habitat, periphyton, benthic macroinvertebrates, and fish at all sites. Sediment was collected during the ecological survey for analysis of sediment chemistry and toxicity testing. Of the 100 sites, 50 were selected for the MSQA random stratified group from 154 NRSA sites planned for the region, and the other 50 MSQA sites were selected as targeted sites to more evenly cover agricultural and urban stressor gradients in the study area. Of the 50 targeted sites, 12 were in urbanized watersheds and 21 represented “good” biological conditions or “least disturbed” conditions. The remaining 17 targeted sites were selected to improve coverage of the agricultural intensity gradient or because of historical data collection to provide temporal context for the study.This report provides a detailed description of the MSQA study components, including surveys of ecological conditions, routine water sampling, deployment of passive polar organic compound integrative samplers, and stream sediment sampling at all sites. Component studies that were completed to provide finer scale temporal data or more extensive analysis at selected sites, included continuous water-quality monitoring, daily pesticide sampling, laboratory and in-stream water toxicity testing efforts, and deployment of passive suspended-sediment samplers.

Seismo-acoustic imaging of marine hard substrate habitats: a case study from the German Bight (SE North Sea)

NASA Astrophysics Data System (ADS)

Papenmeier, Svenja; Hass, H. Christian

2016-04-01

The detection of hard substrate habitats in sublittoral environments is a considerable challenge in spite of modern high resolution hydroacoustic techniques. In offshore areas those habitats are mainly represented by either cobbles and boulders (stones) often located in wide areas of soft sediments or by glacial relict sediments (heterogeneous mixture of medium sand to gravel size with cobbles and boulders). Sediment classification and object detection is commonly done on the basis of hydroacoustic backscatter intensities recorded with e.g. sidescan sonar (SSS) and multibeam echo sounder (MBES). Single objects lying on the sediment such as stones can generally be recognized by the acoustic shadow behind the object. However, objects close to the sonar's nadir may remain undetected because their shadows are below the data resolution. Further limitation in the detection of objects is caused by sessile communities that thrive on the objects. The bio-cover tends to absorb most of the acoustic signal. Automated identification based on the backscatter signal is often not satisfactory, especially when stones are present in a setting with glacial deposits. Areas characterized by glacial relict sediments are hardly differentiable in their backscatter characteristics from rippled coarse sand and fine gravel (rippled coarse sediments) without an intensive ground-truthing program. From the ecological point of view the relict and rippled coarse sediments are completely different habitats and need to be distinguished. The case study represents a seismo-acoustic approach in which SSS and nonlinear sediment echo sounder (SES) data are combined to enable a reliable and reproducible differentiation between relict sediments (with stones and coarse gravels) and rippled coarse sediments. Elevated objects produce hyperbola signatures at the sediment surface in the echo data which can be used to complement the SSS data. The nonlinear acoustic propagation of the SES sound pulses produces a comparably small foot print which results in high spatial resolution (decimeter in the xyz directions) and hence allows a more precise demarcation of hard substrate areas. Data for this study were recorded in the "Sylt Outer Reef" (German Bight, North Sea) in May 2013 and March 2015. The investigated area is characterized by heterogeneously distributed moraine deposits and rippled coarse sediments partly draped with Holocene fine sands. The relict sediments and the rippled coarse sediments indicate both high backscatter intensities but can be distinguished by means of the hyperbola locations. The northeast of the study area is dominated by rippled coarse sediments (without hyperbolas) and the southwestern part by relict sediments with a high amount of stones represented by hyperbolas which is also proven by extensive ground-truthing (grab sampling and high quality underwater videos). An automated procedure to identify and export the hyperbola positions makes the demarcation of hard substrate grounds (here: relict sediments) reproducible, faster and less complex in comparison to the visual-manual identification on the basis of sidescan sonar data.

Endocrine disrupting chemicals in New Orleans surface waters and Mississippi Sound sediments.

PubMed

Wang, Guangdi; Ma, Peng; Zhang, Qiang; Lewis, John; Lacey, Michelle; Furukawa, Yoko; O'Reilly, S E; Meaux, Shelley; McLachlan, John; Zhang, Shaoyuan

2012-05-01

Endocrine disrupting compounds (EDCs), represented by steroid hormones, organochlorine pesticides (OCPs), polychlorinated biphenyls (PCBs), and bisphenol A have been determined in four sediment cores from the Gulf of Mexico, from New Orleans surface water (Lake Pontchartrain and Mississippi River), and from the influent and effluent of a New Orleans municipal sewage treatment plant. During the five-month monitoring of selected EDCs in the Mississippi River (MR) and Lake Pontchartrain (LP) in 2008, 21 of 29 OCPs in MR and 17 of 29 OCPs in LP were detected; bisphenol A was detected in all of the samples. Steroid hormones (estrone, 17β-estradiol and 17α-ethinylestradiol) were detected occasionally. Total EDC (OCPs + PCBs + steroid hormones + bisphenol A) concentrations in the two surface water samples were found to vary from 148 to 1112 ng L(-1). Strong correlation of the distribution of total OCPs, total PCBs and total EDCs between solid and water phases was found in LP, while moderate or no correlation existed in MR. OCPs, PCBs, steroid hormones, and bisphenol A were all detected in the ocean sediments, and total EDCs were measured in the range of 77 to 1796 ng g(-1) dry sediment weight. The EDCs were also found in untreated and treated municipal sewage samples with a removal efficiency of 83% for OCPs but no removal efficiency for 17α-ethinylestradiol.

Depositional environment, foraminifer content and ESR ages of Quaternary Gediz Delta Sediments (Eastern Aegean Sea, İzmir-Western Turkey)

NASA Astrophysics Data System (ADS)

Gökçe Benli, Ekin; Aydın, Hülya; İşintek, İsmail; Engin, Birol; Şengöçmen, Berna

2016-04-01

Sediments and fossil content of Gediz Delta (Eastern Aegean Sea - İzmir) were examined based on the drilling core samples of the YSK-C and SK-246 drilling. W-SW part of the Delta is represented by continental delta sediments up to 6 meters and shallow marine detritic sediments up to 35 meters in the YSK-C drilling. Continental part consists of an soiled, graveled, muddy and sandy sediment in terms of rich organic substance. As for marine part, it consists of bioclast, muddy, fine graveled sand and by repetition of pebble, sand and bioclast bearing mud layers. Bioclasts comprise of bivalvia, echinoid, ostracod, gastropod, foramifer and bryozoa fragments. Benthic foraminiferal fauna determinated in the marine levels are represented by 55 bethic, 2 planktonic species. These foraminifers and bioclasts reflect that the W-SW part of the delta, has been occured in marine conditions between 8-31m deep. E-NE part of the delta is generally represented by continental sediments up to 43.5m in SK-246 drilling. In addition, it includes marine levels in 18-19 m, 23-24 m and 36-37,5 m intervals. Continental sediments of E-NE part is generally represented by calcareous and sandy mud rocks which mostly includes ash, tuff, and pebble derived from Neogene volcanic rocks. As for marine levels, it is composed of calcareous mud stones and calcareous clay stones including very thin gastropod, bivalvia and ostracod in 18- 19 and 36-37.5 meters whereas it is represented by sandy mud stones including a great deal of bentic foraminifer, bivalvia, bryozoa, echinoid, gastropod in 23-24 metres. Thus show that E-NE part of the delta is usually in continental condition but it is occasionally covered by sea. In aging studies of YSK-C core done by ESR method, age of 8-9 m interval is determined to be 11. 376 ± 0,067 Ka; however ages of 10-11m and 24-25 m intervals are revealed to be 16.466 ± 0,016 Ka and 15.344 ± 0,021 Ka respectively; finally age of 25-26 m interval is found to be 19.995 ± 0,022 Ka. This results reflect while the W-SW part of the delta is in marine condition between 20 and 11 Ka, in the E-NE part of the delta, continental and marine conditions were repeated.

Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara

PubMed Central

Quaiser, Achim; Zivanovic, Yvan; Moreira, David; López-García, Purificación

2011-01-01

To extend comparative metagenomic analyses of the deep-sea, we produced metagenomic data by direct 454 pyrosequencing from bathypelagic plankton (1000 m depth) and bottom sediment of the Sea of Marmara, the gateway between the Eastern Mediterranean and the Black Seas. Data from small subunit ribosomal RNA (SSU rRNA) gene libraries and direct pyrosequencing of the same samples indicated that Gamma- and Alpha-proteobacteria, followed by Bacteroidetes, dominated the bacterial fraction in Marmara deep-sea plankton, whereas Planctomycetes, Delta- and Gamma-proteobacteria were the most abundant groups in high bacterial-diversity sediment. Group I Crenarchaeota/Thaumarchaeota dominated the archaeal plankton fraction, although group II and III Euryarchaeota were also present. Eukaryotes were highly diverse in SSU rRNA gene libraries, with group I (Duboscquellida) and II (Syndiniales) alveolates and Radiozoa dominating plankton, and Opisthokonta and Alveolates, sediment. However, eukaryotic sequences were scarce in pyrosequence data. Archaeal amo genes were abundant in plankton, suggesting that Marmara planktonic Thaumarchaeota are ammonia oxidizers. Genes involved in sulfate reduction, carbon monoxide oxidation, anammox and sulfatases were over-represented in sediment. Genome recruitment analyses showed that Alteromonas macleodii ‘surface ecotype', Pelagibacter ubique and Nitrosopumilus maritimus were highly represented in 1000 m-deep plankton. A comparative analysis of Marmara metagenomes with ALOHA deep-sea and surface plankton, whale carcasses, Peru subsurface sediment and soil metagenomes clustered deep-sea Marmara plankton with deep-ALOHA plankton and whale carcasses, likely because of the suboxic conditions in the deep Marmara water column. The Marmara sediment clustered with the soil metagenome, highlighting the common ecological role of both types of microbial communities in the degradation of organic matter and the completion of biogeochemical cycles. PMID:20668488

Detrital and oceanic dysoxia influence on OAE2 sediment geochemistry from Tarfaya, SW Morocco

NASA Astrophysics Data System (ADS)

Turgeon, S. C.; Kolonic, S.; Brumsack, H.-J.; Wagner, T.

2003-04-01

The Cretaceous "greenhouse" world's stratigraphic record is punctuated by several important organic-rich intervals representing quasi-global "Oceanic Anoxic Events" (OAEs). This study focuses on sediments from Tarfaya in SW Morocco deposited during the Cenomanian-Turonian Boundary Event (CTBE or OAE2 at 93.5 Ma). These sediments consist of distinctly laminated, carbonate-rich black shales alternating with lighter coloured structureless intervals and sporadic chert lenses. Sediments from three sites representing proximal to distal settings were studied. Samples were analysed for Ctot, Corg, Stot, as well as several major-, minor- and trace elements using XRF and ICP-MS. These sediments are characterised by high Corg, Stot, and CaCO3 contents and consist of a simple two component mixing system ("average shale"-CaCO3). Major element concentrations are low, except for Ca and P, owing in part to the carbonate dilution effect. Most elements plot along "average shale" lines. Elements such as Si, Ti, Fe, K, Rb, and Zr show positive relationships with Al2O3, pointing to homogeneous source area material. Several Al-normalised elements (As, Ba, Cr, Cu, Ni, Sr, U, V, Y, Zn), many of them redox-sensitive or sulphide-residing, are enriched in the sediments indicating an oxygen-depleted environment and potential availability of hydrogen sulfide in the water column at the time of deposition. High Zn concentrations suggest increased submarine volcanism and/or hydrothermal activity during this time interval. High Ba concentrations are possibly indicative of high regional paleoproductivity, which is further supported by the elevated P concentrations hinting at nutrient availability. Basinward trends in the geochemical distribution of some elements are apparent and probably reflect the decreasing influence of terrestrial sediments away from the shoreline.

Metagenomics in methane seep detection and studies of the microbial methane sediment filter

NASA Astrophysics Data System (ADS)

Gunn Rike, Anne; Håvelsrud, Othilde Elise; Haverkamp, Thomas; Kristensen, Tom; Jakobsen, Kjetill

2013-04-01

Metanotrophic prokaryotes with their capacity to oxidize methane to biomass and CO2 contribute considerably in reduction of the global methane emission from oceans. Metagenomic studies of seabed sediments represent a new approach to detect marine methane seeps and to study whether the inhabiting microbial consortium represent a microbial methane filter. We have used next generation high throughput DNA sequencing technology to study microbial consortia and their potential metabolic processes in marine sediment samples from the Håkon Mosby mud volcano (HMMV) in the Barents Sea, the Tonya Seep in the Coal Oil Point area in California and from the pockmarked area at the Troll oil and gas field in the North Sea. Annotation of archaeal reads from the HMMV metagenome resulted in hits to all enzymes supposed to be involved in the anaerobic oxidation of methane (AOM) carried out by anaerobic methanotrophic archaea (ANME). The presence of several ANME taxa at HMMV has previously been well described (1). The stratification analysis of the Tonya seep sediment showed that both aerobic and anaerobic methanotrophs were present at both layers investigated, although total archaea, ANME-1, ANME-2 and ANME-3 were overabundant in the deepest layer. Several sulphate reducing taxa (possibly syntrophic ANME partners) were detected. The Tonya Seep sediment represent a robust methane filter where presently dominating methanotrophic taxa could be replaced by less abundant methanotrophs should the environmental conditions change (2). In the Troll pockmarked sediments several methanotrophic taxa including ANME-1, ANME-2 and candidate division NC10 were detected although there was an overabundance of autotrophic nitrifiers (e.g. Nitrosopumilis, Nitrococcus, Nitrospira) using CO2 as the carbon source. Methane migrating upwards through the sediments is probably oxidized to CO2 in AOM resulting in an upward CO2 flux. The CO2 entering the seafloor may contribute to maintain the pockmark structure and represent a carbon source for the autotrophic nitrifying community. In this way the sediments at Troll probably contributes to reduce the methane emissions to the water body and further to the atmosphere (3). References: 1) Niemann H, Lösekann T, Boetius A, Kort R, Amann R. Diversity and distribution of methanotrophic archaea at cold seeps. Appl Environ Microbiol 2005, 71(1), 467-479. 2) Håvelsrud, O. E., Haverkamp, T.H.A., Kristensen, T., Jakobsen, K.S. and Rike A.G. Metagenomic study of methane oxidation in Coal Oil Point seep sediments. BMC Microbiology 2011, 11:221 3) Håvelsrud OE, Haverkamp THA., Kristensen T, Jakobsen KS and Rike AG. Metagenomic and geochemical characterization of pockmarked sediments overlaying the Troll petroleum reservoir in the North Sea. BMC Microbiology 2012, 12:203

Determination of pre-mining geochemical conditions and paleoecology in the Animas River Watershed, Colorado

USGS Publications Warehouse

Church, S.E.; Fey, D.L.; Brouwers, E.M.; Holmes, C.W.; Blair, Robert

1999-01-01

Determination of the pre-mining geochemical baseline in bed sediments and the paleoecology in a watershed impacted by historical mining activity is of utmost importance in establishing watershed restoration goals. We have approached this problem in the Animas River watershed using geomorphologic mapping methods to identify old pre-mining sediments. A systematic evaluation of possible sites resulted in collection of a large number of samples of pre-mining sediments, overbank sediments, and fluvial tailings deposits from more than 50 sites throughout the watershed. Chemical analysis of individual stratigraphic layers has resulted in a chemical stratigraphy that can be tied to the historical record through geochronological and dendochronological studies at these sites. Preliminary analysis of geochemical data from more than 500 samples from this study, when coupled with both the historical and geochronological record, clearly show that there has been a major impact by historical mining activities on the geochemical record preserved in these fluvial bed sediments. Historical mining activity has resulted in a substantial increase in metals in the very fine sand to clay sized component of the bed sediment of the upper Animas River, and Cement and Mineral Creeks. Enrichment factors for metals in modern bed sediments, relative to the pre-mining sediments, range from a factor of 2 to 6 for arsenic, 4 to more than 10 for cadmium, 2 to more than 10 for lead, 2 to 5 for silver, and 2 to more than 15 for zinc. However, the pre-mining bed sediment geochemical baseline is high relative to crustal abundance levels of many orerelated metals and the watershed would readily be identified as a highly mineralized area suitable for mineral exploration if it had not been disturbed by historical mining activity. We infer from these data that the water chemistry in the streams was less acidic prior to historical mining activity in the watershed. Paleoentologic evidence does not indicate a healthy aquatic habitat in any of the stream reaches investigated above the confluence of the Animas River with Mineral Creek (fig. 1) prior to the impact of historical mining activity. The absence of paleoentologic remains is interpreted to reflect the poor preservation regime of the bed sediment materials sampled. The fluvial sediments sampled in this study represent higher energy environments than are conducive to the preservation of most aquatic organisms including fish remains. We interpret the sedimentological data to indicate that there has been substantial loss of riparian habitat in the upper Animas River above Howardsville as a result of historical mining activity.

PAH occurrence in chalk river systems from the Jura region (France). Pertinence of suspended particulate matter and sediment as matrices for river quality monitoring.

PubMed

Chiffre, Axelle; Degiorgi, François; Morin-Crini, Nadia; Bolard, Audrey; Chanez, Etienne; Badot, Pierre-Marie

2015-11-01

This study investigates the variations of polycyclic aromatic hydrocarbon (PAH) levels in surface water, suspended particulate matter (SPM) and sediment upstream and downstream of the discharges of two wastewater treatment plant (WWTP) effluents. Relationships between the levels of PAHs in these different matrices were also investigated. The sum of 16 US EPA PAHs ranged from 73.5 to 728.0 ng L(-1) in surface water and from 85.4 to 313.1 ng L(-1) in effluent. In SPM and sediment, ∑16PAHs ranged from 749.6 to 2,463 μg kg(-1) and from 690.7 μg kg(-1) to 3,625.6 μg kg(-1), respectively. Investigations performed upstream and downstream of both studied WWTPs showed that WWTP discharges may contribute to the overall PAH contaminations in the Loue and the Doubs rivers. Comparison between gammarid populations upstream and downstream of WWTP discharge showed that biota was impacted by the WWTP effluents. When based only on surface water samples, the assessment of freshwater quality did not provide evidence for a marked PAH contamination in either of the rivers studied. However, using SPM and sediment samples, we found PAH contents exceeding sediment quality guidelines. We conclude that sediment and SPM are relevant matrices to assess overall PAH contamination in aquatic ecosystems. Furthermore, we found a positive linear correlation between PAH contents of SPM and sediment, showing that SPM represents an integrating matrix which is able to provide meaningful data about the overall contamination over a given time span.

A survey of alterations in microbial community diversity in marine sediments in response to oil from the Deepwater Horizon spill: Northern Gulf of Mexico shoreline, Texas to Florida

USGS Publications Warehouse

Lisle, John T.

2011-01-01

Microbial community genomic DNA was extracted from sediment samples collected from the northern Gulf of Mexico (NGOM) coast. These samples had a high probability of being impacted by Macondo-1 (M-1) well oil from the Deepwater Horizon (DWH) drilling site. The hypothesis for this project was that presence of M-1 oil in coastal sediments would significantly alter the diversity within the microbial communities associated with the impacted sediments. To determine if community-level changes did or did not occur following exposure to M-1 oil, microbial community-diversity fingerprints were generated and compared. Specific sequences within the community's genomic DNA were first amplified using the polymerase chain reaction (PCR) using a primer set that provides possible resolution to the species level. A second nested PCR that was performed on the primary PCR products using a primer set on which a GC-clamp was attached to one of the primers. These nested PCR products were separated using denaturing-gradient gel electrophoresis (DGGE) that resolves the nested PCR products based on sequence dissimilarities (or similarities), forming a genomic fingerprint of the microbial diversity within the respective samples. Sediment samples with similar fingerprints were grouped and compared to oil-fingerprint data from Rosenbauer and others (2010). The microbial community fingerprints grouped closely when identifying those sites that had been impacted by M-1 oil (N=12) and/or some mixture of M-1 and other oil (N=4), based upon the oil fingerprints. This report represents some of the first information on naturally occurring microbial communities in sediment from shorelines along the NGOM coast. These communities contain microbes capable of degrading oil and related hydrocarbons, making this information relevant to response and recovery of the NGOM from the DWH incident.

Relationship between sediment morphology and oil pollution along the Suez Canal beaches, Egypt

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barakat, M.A.K.; Shimy, T.M.; Mostafa, Y.M.

1996-10-01

In this study, marine surface sediments are collected from nine locations along the Suez Canal in order to investigate the relationship between the morphology of sands in the studied beaches and pollution by oil. Basically, the studied samples were analyzed by three techniques: grains-size analysis, microscopic examination, and gas chromatographic (GC) analysis. This study concluded that medium sand is the major class represented in the studied marine sediments. Pollution in these sand grains increases in the irregular grains more so than in the more rounded grains. Also, deep surface points, pitting, and fissures are considered to be good sites tomore » precipitate oil contamination. Also, the presence of iron oxides may be taken as evidence for tanker ballast washings. The heavy fraction (zircon) shows more contamination than the light fraction (quartz) in these samples. Finally, GC profiles have shown two types of samples: one typical of weathered or highly weathered crude oil patterns and the other for samples with very highly weathered profiles. The relationship obtained between morphology studies and both oil content and GC chromatogram profiles indicates that all of the studied locations are suffering from pollution of oil that is spilled while shipping petroleum through the Suez Canal.« less

Compilation, quality control, analysis, and summary of discrete suspended-sediment and ancillary data in the United States, 1901-2010

USGS Publications Warehouse

Lee, Casey J.; Glysson, G. Douglas

2013-01-01

Human-induced and natural changes to the transport of sediment and sediment-associated constituents can degrade aquatic ecosystems and limit human uses of streams and rivers. The lack of a dedicated, easily accessible, quality-controlled database of sediment and ancillary data has made it difficult to identify sediment-related water-quality impairments and has limited understanding of how human actions affect suspended-sediment concentrations and transport. The purpose of this report is to describe the creation of a quality-controlled U.S. Geological Survey suspended-sediment database, provide guidance for its use, and summarize characteristics of suspended-sediment data through 2010. The database is provided as an online application at http://cida.usgs.gov/sediment to allow users to view, filter, and retrieve available suspended-sediment and ancillary data. A data recovery, filtration, and quality-control process was performed to expand the availability, representativeness, and utility of existing suspended-sediment data collected by the U.S. Geological Survey in the United States before January 1, 2011. Information on streamflow condition, sediment grain size, and upstream landscape condition were matched to sediment data and sediment-sampling sites to place data in context with factors that may influence sediment transport. Suspended-sediment and selected ancillary data are presented from across the United States with respect to time, streamflow, and landscape condition. Examples of potential uses of this database for identifying sediment-related impairments, assessing trends, and designing new data collection activities are provided. This report and database can support local and national-level decision making, project planning, and data mining activities related to the transport of suspended-sediment and sediment-associated constituents.

Persistent Organic Pollutants in sediment and fish in the River Thames Catchment (UK).

PubMed

Lu, Qiong; Jürgens, Monika D; Johnson, Andrew C; Graf, Carola; Sweetman, Andy; Crosse, John; Whitehead, Paul

2017-01-15

Some organic pollutants including polychlorinated biphenyls (PCBs), polybrominated diphenylethers (PBDEs) and hexachlorobenzene (HCB) have been banned from production and use in the UK for >30years but due to their toxicity and persistence are still of concern. However, due to their hydrophobicity they are present at very low concentrations and are difficult to measure in water, and so other matrices need to be sampled in order to best assess contamination. This study measured concentrations of ΣICES 7 PCBs (PCB congeners 28, 52, 101, 118, 138, 153 and 180) and Σ6 PBDEs (PBDE congeners 28, 47, 99, 100, 153, 154) and HCB in both bed-sediments and wild roach (a common pelagic fish) in the Thames Basin. The highest sediment concentrations were detected in an urbanised tributary of the Thames, The Cut at Bracknell (HCB: 0.03-0.40μg/kg dw; ICES 7 PCBs: 4.83-7.42μg/kg dw; 6 BDEs: 5.82-23.10μg/kg dw). When concentrations were expressed on a dry weight basis, the fish were much more contaminated than the sediments, but when sediment concentrations were normalised to organic carbon concentration they were comparable to the fish lipid normalised concentrations. Thus, despite the variability in the system, both sediments and wild fish can be considered suitable for representing the level of POPs contamination of the river system given sufficient sample numbers. Copyright © 2016 Elsevier B.V. All rights reserved.

Effective Discharge and Annual Sediment Yield on Brazos River

NASA Astrophysics Data System (ADS)

Rouhnia, M.; Salehi, M.; Keyvani, A.; Ma, F.; Strom, K. B.; Raphelt, N.

2012-12-01

Geometry of an alluvial river alters dynamically over the time due to the sediment mobilization on the banks and bottom of the river channel in various flow rates. Many researchers tried to define a single representative discharge for these morphological processes such as "bank-full discharge", "effective discharge" and "channel forming discharge". Effective discharge is the flow rate in which, the most sediment load is being carried by water, in a long term period. This project is aimed to develop effective discharge estimates for six gaging stations along the Brazos River from Waco, TX to Rosharon, TX. The project was performed with cooperation of the In-stream Flow Team of the Texas Water Development Board (TWDB). Project objectives are listed as: 1) developing "Flow Duration Curves" for six stations based on mean-daily discharge by downloading the required, additional data from U.S Geological Survey website, 2) developing "Rating Curves" for six gaging stations after sampling and field measurements in three different flow conditions, 3) developing a smooth shaped "Sediment Yield Histogram" with a well distinguished peak as effective discharge. The effective discharge was calculated using two methods of manually and automatic bin selection. The automatic method is based on kernel density approximation. Cross-sectional geometry measurements, particle size distributions and water field samples were processed in the laboratory to obtain the suspended sediment concentration associated with flow rate. Rating curves showed acceptable trends, as the greater flow rate we experienced, the more sediment were carried by water.

Survey of PAH in low density residential stormwater ponds in coastal South Carolina: false dark mussels (Mytilopsis leucophaeata) as potential biomonitors.

PubMed

Flemming, Alan T; Weinstein, John E; Lewitus, Alan J

2008-09-01

The distribution of PAHs was studied in sediment and false dark mussels, Mytilopsis leucophaeata, of three brackish stormwater retention ponds on Kiawah Island, a gated residential community and golf resort. Impervious surface in pond watersheds ranged from 5 to 30%. Sediment concentrations were lower than those found in other studies of suburban residential areas, and there were no significant differences among ponds or seasons. Mean summation PAH16 values for sediments in Ponds 67, 100, and 37 were 184.7+/-101.3ng g(-1), 67.5+/-26.0ng g(-1), and 84.3+/-75.5ng g(-1), respectively. Mussel summation PAH16 concentrations from Pond 67 in August (mean 734.5+/-148.1ng g(-1)), and from Pond 37 in December (mean 1115.1+/-87.7ng g(-1)), were significantly higher than other ponds. Mean summation PAH16 values for mussels in Ponds 67, 100, and, 37 were 555.9+/-219.7ng g(-1), 312.5+/-99.1ng g(-1) and 737.8+/-419.8ng g(-1), respectively. The mean biota-to-sediment ratio was 7.6+/-8.1. Isomer ratios generally suggested pyrogenic sources. False dark mussels are a promising indicator species for PAH contamination because they are abundant, easy to sample, bioaccumulate PAH profiles representative of the time-integrated sediment profiles, and their PAH levels are less variable than either stormwater or sediment samples.

Thermal conductivity measurements of particulate materials: 3. Natural samples and mixtures of particle sizes

NASA Astrophysics Data System (ADS)

Presley, Marsha A.; Craddock, Robert A.

2006-09-01

A line-heat source apparatus was used to measure thermal conductivities of natural fluvial and eolian particulate sediments under low pressures of a carbon dioxide atmosphere. These measurements were compared to a previous compilation of the dependence of thermal conductivity on particle size to determine a thermal conductivity-derived particle size for each sample. Actual particle-size distributions were determined via physical separation through brass sieves. Comparison of the two analyses indicates that the thermal conductivity reflects the larger particles within the samples. In each sample at least 85-95% of the particles by weight are smaller than or equal to the thermal conductivity-derived particle size. At atmospheric pressures less than about 2-3 torr, samples that contain a large amount of small particles (<=125 μm or 4 Φ) exhibit lower thermal conductivities relative to those for the larger particles within the sample. Nonetheless, 90% of the sample by weight still consists of particles that are smaller than or equal to this lower thermal conductivity-derived particle size. These results allow further refinement in the interpretation of geomorphologic processes acting on the Martian surface. High-energy fluvial environments should produce poorer-sorted and coarser-grained deposits than lower energy eolian environments. Hence these results will provide additional information that may help identify coarser-grained fluvial deposits and may help differentiate whether channel dunes are original fluvial sediments that are at most reworked by wind or whether they represent a later overprint of sediment with a separate origin.

Spatial and Temporal Variations in Diatoms from la Chaine des Lacs Urban Watershed, Nord-Pas France, in Relation to Water Quality

NASA Astrophysics Data System (ADS)

Noble, P. J.; Van de Vijver, B.; Verleyen, E.; Prygiel, J.; Ivanovsky, A.; Lesven, L.; Billon, G.

2016-12-01

Diatom analysis was conducted on lake sediments in la Chaîne des Lacs (CDL), a shallow eutrophic urban park and storm control system in Villeneuve d'Ascq, France, to address both the present day water quality, and the evolution of this urban system over its 40 year history. The main lake, Lac du Héron (LDH), received recent attention because of water quality problems, including eutrophication, harmful algal blooms, and invasion by the macrophyte Elodea in 2012. A total of 17 sites were collected in CDL, 11 of which were in LDH, to document spatial variability, and a 26cm long core addresses historical changes. The bulk of the diatom assemblage in LDH can be classified as both eutrophic and moderately metal tolerant, using modern national diatom indices developed and used by the French regional water agencies. Surface sediment samples within LDH show large spatial variations in %Cocconeis placentula whose habitat is epiphytic growth on Elodea. Other variation is reflected in the phytoplankton composition both spatially, and interannually. Aulacoseira muzzanensis and Cyclostephanos dubius showed greater abundance in the open water habitats in LDH, whereas sites in CDL outside of LDH had greater Cyclotella meneghiniana. Temporally, Stephanodicsus (largely S. hantzschii), the dominant diatom in early spring, were present in greater abundances in the 2016 surface sediment samples than in any of the 2015 samples. One possible explanation is that the 2016 samples, taken March 30th, preferentially preserved the early spring Stephanodiscus bloom, in contrast to the 2015 samples, which were taken in January. The sediment core provides an historical record, where the uppermost 4cm plot with the bulk of the LDH surface samples and contain abundant Cocconeis, 4 -14cm is phytoplankton-rich, largely Cyclostephanos dubius and Aulacoseira muzzanensis, and represents a less weed-choked environment prior to the 2012 Elodea invasion. The base of the core is dominated by Amphora and Rhoicosphenia abbreviata, is most similar to an outlier site on the Marque River, and represents early conditions after the reservoir was established. Continued work will focus on relating these results to urban development, improvements of the sewage system, and meteorological patterns.

Predictive modelling of grain-size distributions from marine electromagnetic profiling data using end-member analysis and a radial basis function network

NASA Astrophysics Data System (ADS)

Baasch, B.; Müller, H.; von Dobeneck, T.

2018-07-01

In this work, we present a new methodology to predict grain-size distributions from geophysical data. Specifically, electric conductivity and magnetic susceptibility of seafloor sediments recovered from electromagnetic profiling data are used to predict grain-size distributions along shelf-wide survey lines. Field data from the NW Iberian shelf are investigated and reveal a strong relation between the electromagnetic properties and grain-size distribution. The here presented workflow combines unsupervised and supervised machine-learning techniques. Non-negative matrix factorization is used to determine grain-size end-members from sediment surface samples. Four end-members were found, which well represent the variety of sediments in the study area. A radial basis function network modified for prediction of compositional data is then used to estimate the abundances of these end-members from the electromagnetic properties. The end-members together with their predicted abundances are finally back transformed to grain-size distributions. A minimum spatial variation constraint is implemented in the training of the network to avoid overfitting and to respect the spatial distribution of sediment patterns. The predicted models are tested via leave-one-out cross-validation revealing high prediction accuracy with coefficients of determination (R2) between 0.76 and 0.89. The predicted grain-size distributions represent the well-known sediment facies and patterns on the NW Iberian shelf and provide new insights into their distribution, transition and dynamics. This study suggests that electromagnetic benthic profiling in combination with machine learning techniques is a powerful tool to estimate grain-size distribution of marine sediments.

Predictive modelling of grain size distributions from marine electromagnetic profiling data using end-member analysis and a radial basis function network

NASA Astrophysics Data System (ADS)

Baasch, B.; M"uller, H.; von Dobeneck, T.

2018-04-01

In this work we present a new methodology to predict grain-size distributions from geophysical data. Specifically, electric conductivity and magnetic susceptibility of seafloor sediments recovered from electromagnetic profiling data are used to predict grain-size distributions along shelf-wide survey lines. Field data from the NW Iberian shelf are investigated and reveal a strong relation between the electromagnetic properties and grain-size distribution. The here presented workflow combines unsupervised and supervised machine learning techniques. Nonnegative matrix factorisation is used to determine grain-size end-members from sediment surface samples. Four end-members were found which well represent the variety of sediments in the study area. A radial-basis function network modified for prediction of compositional data is then used to estimate the abundances of these end-members from the electromagnetic properties. The end-members together with their predicted abundances are finally back transformed to grain-size distributions. A minimum spatial variation constraint is implemented in the training of the network to avoid overfitting and to respect the spatial distribution of sediment patterns. The predicted models are tested via leave-one-out cross-validation revealing high prediction accuracy with coefficients of determination (R2) between 0.76 and 0.89. The predicted grain-size distributions represent the well-known sediment facies and patterns on the NW Iberian shelf and provide new insights into their distribution, transition and dynamics. This study suggests that electromagnetic benthic profiling in combination with machine learning techniques is a powerful tool to estimate grain-size distribution of marine sediments.

Trace element and isotope geochemistry of Cretaceous-Tertiary boundary sediments: identification of extra-terrestrial and volcanic components

NASA Technical Reports Server (NTRS)

Margolis, S. V.; Doehne, E. F.

1988-01-01

Trace element and stable isotope analyses were performed on a series of sediment samples crossing the Cretaceous-Tertiary (K-T) boundary from critical sections at Aumaya and Sopelano, Spain. The aim is to possibly distinguish extraterrestrial vs. volcanic or authigenic concentration of platinum group and other elements in K-T boundary transitional sediments. These sediments also have been shown to contain evidence for step-wise extinction of several groups of marine invertebrates, associated with negative oxygen and carbon isotope excursions occurring during the last million years of the Cretaceous. These isotope excursions have been interpreted to indicate major changes in ocean thermal regime, circulation, and ecosystems that may be related to multiple events during latest Cretaceous time. Results to date on the petrographic and geochemical analyses of the Late Cretaceous and Early Paleocene sediments indicate that diagenesis has obviously affected the trace element geochemistry and stable isotope compositions at Zumaya. Mineralogical and geochemical analysis of K-T boundary sediments at Zumaya suggest that a substantial fraction of anomalous trace elements in the boundary marl are present in specific mineral phases. Platinum and nickel grains perhaps represent the first direct evidence of siderophile-rich minerals at the boundary. The presence of spinels and Ni-rich particles as inclusions in aluminosilicate spherules from Zumaya suggests an original, non-diagenetic origin for the spherules. Similar spherules from southern Spain (Caravaca), show a strong marine authigenic overprint. This research represents a new approach in trying to directly identify the sedimentary mineral components that are responsible for the trace element concentrations associated with the K-T boundary.

Potential sources of hydrocarbons and their microbial degradation in sediments from the deep geothermal Lusi site, Indonesia

NASA Astrophysics Data System (ADS)

Krueger, Martin; Mazzini, Adriano; Scheeder, Georg; Blumenberg, Martin

2017-04-01

The Lusi eruption represents one of the largest ongoing sedimentary hosted geothermal systems, which started in 2006 following an earthquake on Java Island. Since then it has been continuously producing hot and hydrocarbon rich mud from a central crater with peaks reaching 180.000 m3 per day. Numerous investigations focused on the study of microbial communities which thrive at offshore methane and oil seeps and mud volcanoes, however very little has been done on onshore seeping structures. Lusi represents a unique opportunity to complete a comprehensive study of onshore microbial communities fed by the seepage of CH4 as well as of liquid hydrocarbons originating from one or more km below the surface. While the source of the methane at Lusi is unambiuous, the origin of the seeping oil is still discussed. Both, source and maturity estimates from biomarkers, are in favor of a type II/III organic matter source. Likely the oils were formed from the studied black shales (deeper Ngimbang Fm.) which contained a Type III component in the Type II predominated organic matter. In all samples large numbers of active microorganisms were present. Rates for aerobic methane oxidation were high, as was the potential of the microbial communities to degrade different hydrocarbons. The data suggests a transition of microbial populations from an anaerobic, hydrocarbon-driven metabolism in fresher samples from center or from small seeps to more generalistic, aerobic microbial communities in older, more consolidated sediments. Ongoing microbial activity in crater sediment samples under high temperatures (80-95C) indicate a deep origin of the involved microorganisms. First results of molecular analyses of the microbial community compositions confirm the above findings. This study represents an initial step to better understand onshore seepage systems and provides an ideal analogue for comparison with the better investigated offshore structures.

Dilution correction equation revisited: The impact of stream slope, relief ratio and area size of basin on geochemical anomalies

NASA Astrophysics Data System (ADS)

Shahrestani, Shahed; Mokhtari, Ahmad Reza

2017-04-01

Stream sediment sampling is a well-known technique used to discover the geochemical anomalies in regional exploration activities. In an upstream catchment basin of stream sediment sample, the geochemical signals originating from probable mineralization could be diluted due to mixing with the weathering material coming from the non-anomalous sources. Hawkes's equation (1976) was an attempt to overcome the problem in which the area size of catchment basin was used to remove dilution from geochemical anomalies. However, the metal content of a stream sediment sample could be linked to several geomorphological, sedimentological, climatic and geological factors. The area size is not itself a comprehensive representative of dilution taking place in a catchment basin. The aim of the present study was to consider a number of geomorphological factors affecting the sediment supply, transportation processes, storage and in general, the geochemistry of stream sediments and their incorporation in the dilution correction procedure. This was organized through employing the concept of sediment yield and sediment delivery ratio and linking such characteristics to the dilution phenomenon in a catchment basin. Main stream slope (MSS), relief ratio (RR) and area size (Aa) of catchment basin were selected as the important proxies (PSDRa) for sediment delivery ratio and then entered to the Hawkes's equation. Then, Hawkes's and new equations were applied on the stream sediment dataset collected from Takhte-Soleyman district, west of Iran for Au, As and Sb values. A number of large and small gold, antimony and arsenic mineral occurrences were used to evaluate the results. Anomaly maps based on the new equations displayed improvement in anomaly delineation taking the spatial distribution of mineral deposits into account and could present new catchment basins containing known mineralization as the anomaly class, especially in the case of Au and As. Four catchment basins having Au and As mineralization were added to anomaly class and also one catchment basin with known As occurrence was highlighted as anomalous using new approach. The results demonstrated the usefulness of considering geomorphological parameters in dealing with dilution phenomenon in a catchment basin.

Occurrence and distribution of selected heavy metals in the surface sediments of South Brittany coastal waters: An assessment using pollution indicators

NASA Astrophysics Data System (ADS)

Ong, M. C.; Menier, D.; Noor Azhar, M. S.; Dupont, V.; Révillon, S.

2012-04-01

In order to avoid the pollution of heavy metals in South Brittany water, it is necessary to establish the data and understand the mechanisms influencing the distribution of heavy metals of the area. One of the aims of this work was to assess heavy metals contamination in Gulf of Morbihan and Quiberon Bay. Another aim was to use interpolation surfaces per metals to assess the contamination separately per metal. A total of 196 bottom sediment samples were collected from the coastal waters in order to determine the spatial concentration of Cr, Mn, Co, Cu, Zn, Cd and Pb by Inductively Coupled Plasma Mass Spectrometry (ICPMS) after acid digestion. The average heavy metal concentrations are ranked as follows: Mn>Zn>Cr>Pb>Cu>Cu>Cd. In the gulf, metal enrichments observed compared to the bay environment may due river run-off from three major river (Auray, Le Marle and Novalo rivers) which carried municipal waste and maritime activities along the coastal area within the gulf. Beside those factors, the natural factors such as the sheltered basin morphology itself, fine sediment and low hydrodynamic regime which favour the in situ accumulation of pollutants. The level of pollution levels attributed to heavy metals was evaluated using several pollution indicators in order to determine anthropogenically derived sediment contamination. Comparison to sediment quality guidelines (SQGs), enrichment factors (EFs), index of geoaccumulation (Igeo) and contamination factors (CF) based on reference element and background value to compensate for the influence of the natural variability in sediment mineralogy and to assess whether the concentration observed in surface sediment represent background and contaminated levels and visualize using ArcGIS software. These analyses validated that the bottom sediment only enriched in Pb and the other metals in most sample are not due to artificial contamination. Overall, geochemistry of the samples show the effect of both natural and anthropogenic inputs to the catchment, however, natural processes are more dominant than anthropogenic inputs in concentrating metals in the sediment.

Mössbauer spectroscopic study of the test well (DND) located in Jaisalmer Basin of Rajasthan, India

NASA Astrophysics Data System (ADS)

Ganwani, Girish; Meena, Samay Singh; Ram, Sahi; Bhatia, Beena; Tripathi, R. P.

2018-05-01

The Jaisalmer basin represents mainly the westerly dipping flank of Indus shelf. The palynological and geochemical studies have predicted good quality of hydrocarbons in this basin. The cretaceous and Jurassic sediments are believed to contain source rock in this basin. In present preliminary study, Mössbauer spectroscopic investigation has been done on sedimentary samples collected from different depths of upper cretaceous sedimentary sequence of well DND-1 drilled in Jaisalmer basin. The iron is found mainly in carbonate and clay. The relatively small presence of Fe2+ in comparison to Fe3+ in clay is an indication of poor reducing environment in sediments, which can be attributed to poor maturity of source rocks in upper cretaceous sediments of this basin.

High fungal diversity and abundance recovered in the deep-sea sediments of the Pacific Ocean.

PubMed

Xu, Wei; Pang, Ka-Lai; Luo, Zhu-Hua

2014-11-01

Knowledge about the presence and ecological significance of bacteria and archaea in the deep-sea environments has been well recognized, but the eukaryotic microorganisms, such as fungi, have rarely been reported. The present study investigated the composition and abundance of fungal community in the deep-sea sediments of the Pacific Ocean. In this study, a total of 1,947 internal transcribed spacer (ITS) regions of fungal rRNA gene clones were recovered from five sediment samples at the Pacific Ocean (water depths ranging from 5,017 to 6,986 m) using three different PCR primer sets. There were 16, 17, and 15 different operational taxonomic units (OTUs) identified from fungal-universal, Ascomycota-, and Basidiomycota-specific clone libraries, respectively. Majority of the recovered sequences belonged to diverse phylotypes of Ascomycota (25 phylotypes) and Basidiomycota (18 phylotypes). The multiple primer approach totally recovered 27 phylotypes which showed low similarities (≤97 %) with available fungal sequences in the GenBank, suggesting possible new fungal taxa occurring in the deep-sea environments or belonging to taxa not represented in the GenBank. Our results also recovered high fungal LSU rRNA gene copy numbers (3.52 × 10(6) to 5.23 × 10(7)copies/g wet sediment) from the Pacific Ocean sediment samples, suggesting that the fungi might be involved in important ecological functions in the deep-sea environments.

Individual and cumulative effects of agriculture, forestry and metal mining activities on the metal and phosphorus content of fluvial fine-grained sediment; Quesnel River Basin, British Columbia, Canada.

PubMed

Smith, Tyler B; Owens, Philip N

2014-10-15

The impact of agriculture, forestry and metal mining on the quality of fine-grained sediment (<63 μm) was investigated in the Quesnel River Basin (QRB) (~11,500 km(2)) in British Columbia, Canada. Samples of fine-grained sediment were collected monthly during the snow-free season in 2008 using time-integrated samplers at replicate sites representative of agriculture, forestry and mining activities in the basin (i.e. "impacted" sites). Samples were also collected from replicate reference sites and also from the main stem of the Quesnel River at the downstream confluence with the Fraser River. Generally, metal(loid) and phosphorus (P) concentrations for "impacted" sites were greater than for reference sites. Furthermore, concentrations of copper (forestry and mining sites), manganese (agriculture and forestry sites) and selenium (agriculture, forestry and mining sites) exceeded upper sediment quality guideline (SQG) thresholds. These results suggest that agriculture, forestry and metal mining activities are having an influence on the concentrations of sediment-associated metal(loid)s and P in the Quesnel basin. Metal(loid) and P concentrations of sediment collected from the downstream site were not significantly greater than values for the reference sites, and were typically lower than the values for the impacted sites. This suggests that the cumulative effects of agriculture, forestry and mining activities in the QRB are presently not having a measureable effect at the river basin-scale. The lack of a cumulative effect at the basin-scale is thought to reflect: (i) the relatively recent occurrence of land use disturbances in this basin; (ii) the dominance of sediment contributions from natural forest and agriculture; and (iii) the potential for storage of contaminants on floodplains and other storage elements between the locations of disturbance activities and the downstream sampling site, which may be attenuating the disturbance signal. Copyright © 2014 Elsevier B.V. All rights reserved.

Spatial distribution and ecotoxicity of petroleum hydrocarbons in sediments from the Galicia continental shelf (NW Spain) after the Prestige oil spill.

PubMed

Franco, M A; Viñas, L; Soriano, J A; de Armas, D; González, J J; Beiras, R; Salas, N; Bayona, J M; Albaigés, J

2006-01-01

The distribution of aliphatic and aromatic hydrocarbons was determined in surface sediments collected at 36 stations along the Galicia continental shelf (NW Spain), following the Prestige oil spill. Sampling was performed in December 2002, just after the accident, and in February and September 2003. Concentrations of PAHs (summation operator 13 parent components) were in the range of 0.9-422 microg/kgdw, the highest values being close to coastal urban areas (e.g. Pontevedra and A Coruña), whereas in the stations of the area most heavily impacted by the spill (off Costa da Morte) concentrations were in the range of 14.8-89.6 microg/kgdw, with a certain predominance of alkylated compounds, which may suggest a mixture of petrogenic and pyrolytic sources. The detailed study of petrogenic molecular markers (e.g. steranes and triterpanes) showed the occurrence of an old (weathered) petrogenic chronic pollution in the shelf sediments but not of the Prestige oil, with the possible exception of few stations in the area of Costa da Morte. This was attributed to the heavy nature of the spilled oil that was barely dispersed in the water column and mainly stranded on the coast or sedimented in the form of oil patches. The addition of increasing amounts of fuel oil to a representative sediment sample showed that the molecular indices were indicative of the presence of the Prestige oil when the amount was above 1g/kg of sediment. The toxicity of selected samples (showing the higher PAH concentrations) was tested using the bivalve embryogenesis bioassay. Embryogenesis success reached high values in all cases (80-88%, with 86% in the control), indicating a lack of toxicity in the sediments and supporting the conclusion that the patchiness of the fuel eventually reaching the seafloor reduced its impact on the benthic communities of the Galician shelf.

Estimation of sediment sources using selected chemical tracers in the Perry lake basin, Kansas, USA

USGS Publications Warehouse

Juracek, K.E.; Ziegler, A.C.

2009-01-01

The ability to achieve meaningful decreases in sediment loads to reservoirs requires a determination of the relative importance of sediment sources within the contributing basins. In an investigation of sources of fine-grained sediment (clay and silt) within the Perry Lake Basin in northeast Kansas, representative samples of channel-bank sources, surface-soil sources (cropland and grassland), and reservoir bottom sediment were collected, chemically analyzed, and compared. The samples were sieved to isolate the <63 ?? m fraction and analyzed for selected nutrients (total nitrogen and total phosphorus), organic and total carbon, 25 trace elements, and the radionuclide cesium-137 (137Cs). On the basis of substantial and consistent compositional differences among the source types, total nitrogen (TN), total phosphorus (TP), total organic carbon (TOC), and 137Cs were selected for use in the estimation of sediment sources. To further account for differences in particle-size composition between the sources and the reservoir bottom sediment, constituent ratio and clay-normalization techniques were used. Computed ratios included TOC to TN, TOC to TP, and TN to TP. Constituent concentrations (TN, TP, TOC) and activities (137Cs) were normalized by dividing by the percentage of clay. Thus, the sediment-source estimations involved the use of seven sediment-source indicators. Within the Perry Lake Basin, the consensus of the seven indicators was that both channel-bank and surface-soil sources were important in the Atchison County Lake and Banner Creek Reservoir subbasins, whereas channel-bank sources were dominant in the Mission Lake subbasin. On the sole basis of 137Cs activity, surface-soil sources contributed the most fine-grained sediment to Atchison County Lake, and channel-bank sources contributed the most fine-grained sediment to Banner Creek Reservoir and Mission Lake. Both the seven-indicator consensus and 137Cs indicated that channel-bank sources were dominant for Perry Lake and that channel-bank sources increased in importance with distance downstream in the basin. ?? 2009 International Research and Training Centre on Erosion and Sedimentation and the World Association for Sedimentation and Erosion Research.

Variability of in situ sediment strength and pore pressure behavior of tidal estuary surface sediments

NASA Astrophysics Data System (ADS)

Lucking, Greg; Stark, Nina; Lippmann, Thomas; Smyth, Stephen

2017-10-01

Tidal estuaries feature spatially and temporally varying sediment dynamics and characteristics. Particularly, the variability of geotechnical sediment parameters is still poorly understood, limiting the prediction of long-term sediment stability and dynamics. This paper presents results from an in situ investigation of surficial sediments (≤50 cm) in a tidal estuary in New Hampshire (USA), using a portable free fall penetrometer. The aim is to investigate variations in sediment strength and pore pressure behavior with regard to sediment type and seabed morphology. The study also provides a detailed analysis of high velocity impact pore pressure data to derive information about sediment type and permeability. The penetrometer was deployed 227 times, and the findings are correlated to 78 sediment samples. Differences in sediment strength and type were found when transitioning from tidal flats to the deeper channels. Finer-grained sediments located predominantly on the tidal flats appeared well consolidated with noticeable and spatially consistent sediment strength (reflected in an estimate of quasi-static bearing capacity qsbcmax 10 kPa). Sediments with higher sand content (>75%) showed more variations in strength relating to differences in gradation, and likely represent loose and poorly consolidated sands (qsbcmax 10-55 kPa). The rate at which the recorded excess pore pressures approached equilibrium after penetration was classified and related to sediment type. The data indicate that the development of excess pore pressures upon impact and during penetration may provide additional insight into the nature and layering of bed material, such as identifying a desiccated or over-consolidated dilative surficial layer. In summary, with varying sediment grain size distributions, bulk densities and morphology, sediment strength and pore pressure behavior can vary significantly within a tidal estuary.

Causes of toxicity to Hyalella azteca in a stormwater management facility receiving highway runoff and snowmelt. Part II: salts, nutrients, and water quality.

PubMed

Bartlett, A J; Rochfort, Q; Brown, L R; Marsalek, J

2012-01-01

The Terraview-Willowfield Stormwater Management Facility (TWSMF) features a tandem of stormwater management ponds, which receive inputs of multiple contaminants from highway and residential runoff. Previous research determined that benthic communities in the ponds were impacted by poor habitat quality, due to elevated sediment concentrations of metals and polycyclic aromatic hydrocarbons (PAHS), and salinity in the overlying water, but did not address seasonal changes, including those caused by the influx of contaminants with the snowmelt. In order to address this issue, water and sediment samples were collected from the TWSMF during the fall and spring, and four-week sediment toxicity tests were conducted with Hyalella azteca. The effects of metals and PAHs are discussed in a companion paper; the effects of road salt, nutrients, and water quality are discussed here. After exposure to fall samples, survival of Hyalella was reduced (64-74% of controls) at three out of four sites, but growth was not negatively affected. After exposure to spring samples, survival was 0-75% of controls at the two sites furthest downstream, and growth was significantly lower in four out of five sites when comparing Hyalella exposed to site water overlying site sediment versus control water overlying site sediment. Toxicity appeared to be related to chloride concentrations: little or no toxicity occurred in fall samples (200 mg Cl(-)/L), and significant effects on survival and growth occurred in spring samples above 1550 mg Cl(-)/L and 380 mg Cl(-)/L, respectively. Sodium chloride toxicity tests showed similar results: four-week LC50s and EC25s (growth) were 1200 and 420 mg Cl(-)/L, respectively. Although water quality and nutrients were associated with effects observed in the TWSMF, chloride from road salt was the primary cause of toxicity in this study. Chloride persists during much of the year at concentrations representing a significant threat to benthic communities in the TWSMF. Copyright © 2011. Published by Elsevier B.V.

Coastal circulation and sediment dynamics in Hanalei Bay, Kaua'i, Hawaii: Part II: tracking recent fluvial sedimentation; isotope stratigraphy obtained in Summer 2005

USGS Publications Warehouse

Draut, Amy E.; Field, Michael E.; Bothner, Michael H.; Logan, Joshua B.; Casso, Michael A.; Baldwin, Sandra M.; Storlazzi, Curt D.

2006-01-01

Delivery and dispersal of fluvial sediment in Hanalei Bay, Kaua’i, Hawaii, have important implications for the health of local coral reefs. The reef community in Hanalei Bay represents a relatively healthy ecosystem. However, the reefs are periodically stressed by storm waves, and increases in sediment and dissolved substances from the Hanalei River have the potential to cause additional stress. Increased turbidity and sedimentation on corals during Hanalei River floods that occur in seasons of low wave energy, when sediment would not be readily remobilized and advected out of the bay, could affect the health and sustainability of coral reefs and the many associated species. Measurements of short-lived isotopes 7Be and 137Cs in sediment cores have been used to trace the thickness and distribution of terrestrial sediment in Hanalei Bay, in order to assess spatial and temporal patterns of sediment deposition and remobilization relative to coral-reef locations. A third isotope, 210Pb, derived primarily from seawater, provides additional information about recent sedimentary history. Isotope profiles and observations of sedimentary facies from cores collected at multiple locations in June 2005, and again in August 2005, indicate the presence of recent fluvial sediment and organic debris in the east part of the bay near the mouth of the Hanalei River. Away from the immediate vicinity of the river mouth, sediment in the uppermost 1 m below the sea floor had not retained a significant quantity of fluvial sediment within the eight months prior to either sampling effort. During the study interval in summer 2005 the Hanalei River had no major floods and there was relatively little sediment input to the bay. Sediment away from the river mouth was dominated by carbonate sand, although some terrestrial sediment was present in sub-sea-floor horizons. Sedimentary facies and isotope inventories throughout the bay showed substantial spatial heterogeneity. Sediment cores will be collected again at the same sites discussed here during early and late summer 2006. If possible, additional sites will be sampled in the Black Hole depocenter near the river mouth. Major floods in winter and spring 2006 are expected to leave a significant new sediment signal in the bay that should be detected in summer 2006.

The palaeoecologic and biostratigraphic evaluation of Middle Miocene freshwater sediments and microfossils near Denkendorf (Bavaria)

NASA Astrophysics Data System (ADS)

Pirkenseer, C.; Reichenbacher, B.

2009-04-01

Isolated freshwater sediments that partially cover the Jurassic limestones of the Swabian and Franconian Alb represent the northernmost expansion of the Molasse sediments. These sediments represent the analogue to the Brackish Molasse and part of the Upper Freshwater Molasse (Ottnangian to Badenian). Samples of six drillcores from the vicinity of Denkendorf (Franconian Alb, Bavaria) yielded ostracods of the superfamily Cypridoidea, frequent oogonia of charophytes, otoliths of the family Gobiidae, teeth of several taxa of micromammals as well as abundant material of amphibians, reptiles and gastropods. The sediments show a general trend from basal, more clastic influenced deposits to uniformly developed marly sediments with freshwater carbonate intercalations. The acme of microfossil occurrences is associated with the latter section. The palaeoecologic analysis characterises the environment as structured littoral zone (e.g. Pseudocandona steinheimensis, Gyraulus sp., Planorbarius sp., Rana ridibunda, Triturus sp.) of a larger oligo- to mesotrophic (Chara spp., Nitellopsis spp.) low-energy freshwater system under a warm subtropical to tropical climate (Diplocynodon cf. D. styriacus, Channa sp.). The cooccurrence of suboxia- and oligotrophy-tolerant species like Palaeocarassius sp. and Channa sp. may indicate short intervals of regional depletion of oxygene and raise of nutrient content. Mediocypris candonaeformis and Gobius latiformis represent relict species of the preceding Brackwassermolasse. Terrestrial elements include Proboscidea (phalanx), Cervidae (astragalus), land turtles (Testudo sp.) and gastropods (Clausiliidae, Pupillidae, Cepaea sp.). The occurrence of Jurassic xenoclasts and bean iron ore indicate the presence of a tributary system. The faunal and floral assemblages show close affinities to other localities of the Molasse Basin (e.g., Sandelzhausen). In accordance with the depositional history this indicates a palaeogeographic connection with the foreland basin. Furthermore the ostracod assemblage is related to taxa recorded from the Miocene infill of the (isolated) Steinheim meteorite crater (e.g., Pseudocandona steinheimensis). According to the evaluation of the micromammal molars (Megacricetodon cf. M. minor and M. cf. M. bavaricus) the sediments of Denkendorf are attributed to the lower MN5 mammal zone (latest Karpatian to early Badenian) and are thus considered to be younger than the associations found near Hitzhofen and Heitensheim.

Using ground-penetrating radar and sidescan sonar to compare lake bottom geology in New England

NASA Astrophysics Data System (ADS)

Nesbitt, I. M.; Campbell, S. W.; Arcone, S. A.; Smith, S. M.

2017-12-01

Post-Laurentide Ice Sheet erosion and re-deposition has had a significant influence on the geomorphology of New England. Anthropogenic activities such as forestry, farming, and construction of infrastructure such as dams and associated lake reservoirs, has further contributed to near surface changes. Unfortunately, these surface dynamics are difficult to constrain, both in space and time. One analog that can be used to estimate erosion and deposition, lake basin sedimentation, is typically derived from lake bottom sediment core samples. Reliance on core records assumes that derived sedimentation rates are representative of the broader watershed, despite being only a single point measurement. Geophysical surveys suggest that this assumption can be highly erroneous and unrepresentative of an entire lake basin. Herein, we conducted ground-penetrating radar (GPR) and side-scan sonar (SSS) surveys of multiple lakes in Maine, New Hampshire, and Vermont which are representative of different basin types to estimate sedimentation rates since Laurentide retreat. Subsequent age constraints from cores on multiple GPR-imaged horizons could be used to refine estimates of sedimentation rate change caused by evolving physical, biological, and chemical processes that control erosion, transport, and re-deposition. This presentation will provide a summary of GPR and SSS data collection methods, assumptions and limitations, structural and surficial interpretations, and key findings from multiple lake basins in New England. Results show that GPR and SSS are efficient, cost effective, and relatively accurate tools for helping to constrain lake erosion and deposition processes.

Selected laboratory evaluations of the whole-water sample-splitting capabilities of a prototype fourteen-liter Teflon churn splitter

USGS Publications Warehouse

Horowitz, A.J.; Smith, J.J.; Elrick, K.A.

2001-01-01

A prototype 14-L Teflon? churn splitter was evaluated for whole-water sample-splitting capabilities over a range of sediment concentratons and grain sizes as well as for potential chemical contamination from both organic and inorganic constituents. These evaluations represent a 'best-case' scenario because they were performed in the controlled environment of a laboratory, and used monomineralic silica sand slurries of known concentration made up in deionized water. Further, all splitting was performed by a single operator, and all the requisite concentration analyses were performed by a single laboratory. The prototype Teflon? churn splitter did not appear to supply significant concentrations of either organic or inorganic contaminants at current U.S. Geological Survey (USGS) National Water Quality Laboratory detection and reporting limits when test samples were prepared using current USGS protocols. As with the polyethylene equivalent of the prototype Teflon? churn, the maximum usable whole-water suspended sediment concentration for the prototype churn appears to lie between 1,000 and 10,000 milligrams per liter (mg/L). Further, the maximum grain-size limit appears to lie between 125- and 250-microns (m). Tests to determine the efficacy of the valve baffle indicate that it must be retained to facilitate representative whole-water subsampling.

Sea Level Rise Drove Enhanced Coastal Erosion following the Last Glacial Maximum, Southern California, U.S.A.

NASA Astrophysics Data System (ADS)

Sharman, G.; Covault, J. A.; Stockli, D. F.; Sickmann, Z.; Malkowski, M. A.; Johnstone, S.

2017-12-01

Seacliff erosion poses a major threat to southern California coastal communities, including the propensity for episodic cliff failure and damage to residential and commercial property. Rising sea level is predicted to accelerate seacliff retreat, yet few constraints exist on how rapid sea level rise influenced coastal erosion rates in pre-modern timescales. Here we look to the geologic record in submarine fans to investigate changes in relative sediment supply from rivers and coastal erosion, the latter including seacliff retreat and bluffland erosion. To understand how sea level rise driven by past global warming impacted coastal erosion rates, we sampled modern rivers of the Peninsular Ranges and latest Pleistocene-Holocene submarine canyon-fan systems in southern California for detrital zircon U-Pb geochronology (1369 analyses from 10 samples). Modern river samples show a systematic north-south change in grain age populations broadly distributed across Cretaceous time (ca. 70-135 Ma) to a predominance of middle Cretaceous grain ages (ca. 95-115 Ma), reflecting variations in the geologic age of units within each river catchment. The Carlsbad and La Jolla submarine canyon-fan systems, deposited during sea level lowstand and highstand, respectively, exhibit detrital zircon age distributions consistent with derivation from upstream rivers, with mixing in the littoral zone. However, a sample from the Oceanside fan, deposited during rapid sea level rise at ca. 13 ka, is dominated by detrital ages that lack a local source in the northern Peninsular Ranges, including latest Cretaceous, late Jurassic, and Proterozoic ages. However, such grain ages are widespread in Paleogene sedimentary rocks that comprise the shelf and coastal area, suggesting increased sediment supply from coastal and shelf erosion. Assuming that the Oceanside sample is representative of sediment production during sea level rise, sediment mixing calculations suggest a one to two orders of magnitude increase in sediment from coastal erosion relative to river-supplied sediment. Our results thus suggest a significant increase in coastal erosion rates following the Last Glacial Maximum, highlighting the risk that future sea level rise poses to coastal communities.

Diverse molecular signatures for ribosomally ‘active’ Perkinsea in marine sediments

PubMed Central

2014-01-01

Background Perkinsea are a parasitic lineage within the eukaryotic superphylum Alveolata. Recent studies making use of environmental small sub-unit ribosomal RNA gene (SSU rDNA) sequencing methodologies have detected a significant diversity and abundance of Perkinsea-like phylotypes in freshwater environments. In contrast only a few Perkinsea environmental sequences have been retrieved from marine samples and only two groups of Perkinsea have been cultured and morphologically described and these are parasites of marine molluscs or marine protists. These two marine groups form separate and distantly related phylogenetic clusters, composed of closely related lineages on SSU rDNA trees. Here, we test the hypothesis that Perkinsea are a hitherto under-sampled group in marine environments. Using 454 diversity ‘tag’ sequencing we investigate the diversity and distribution of these protists in marine sediments and water column samples taken from the Deep Chlorophyll Maximum (DCM) and sub-surface using both DNA and RNA as the source template and sampling four European offshore locations. Results We detected the presence of 265 sequences branching with known Perkinsea, the majority of them recovered from marine sediments. Moreover, 27% of these sequences were sampled from RNA derived cDNA libraries. Phylogenetic analyses classify a large proportion of these sequences into 38 cluster groups (including 30 novel marine cluster groups), which share less than 97% sequence similarity suggesting this diversity encompasses a range of biologically and ecologically distinct organisms. Conclusions These results demonstrate that the Perkinsea lineage is considerably more diverse than previously detected in marine environments. This wide diversity of Perkinsea-like protists is largely retrieved in marine sediment with a significant proportion detected in RNA derived libraries suggesting this diversity represents ribosomally ‘active’ and intact cells. Given the phylogenetic range of hosts infected by known Perkinsea parasites, these data suggest that Perkinsea either play a significant but hitherto unrecognized role as parasites in marine sediments and/or members of this group are present in the marine sediment possibly as part of the ‘seed bank’ microbial community. PMID:24779375

Suspended-sediment and nutrient loads for Waiakea and Alenaio Streams, Hilo, Hawaii, 2003-2006

USGS Publications Warehouse

Presley, Todd K.; Jamison, Marcael T.J.; Nishimoto, Dale C.

2008-01-01

Suspended sediment and nutrient samples were collected during wet-weather conditions at three sites on two ephemeral streams in the vicinity of Hilo, Hawaii during March 2004 to March 2006. Two sites were sampled on Waiakea Stream at 80- and 860-foot altitudes during March 2004 to August 2005. One site was sampled on Alenaio Stream at 10-foot altitude during November 2005 to March 2006. The sites were selected to represent different land uses and land covers in the area. Most of the drainage area above the upper Waiakea Stream site is conservation land. The drainage areas above the lower site on Waiakea Stream, and the site on Alenaio Stream, are a combination of conservation land, agriculture, rural, and urban land uses. In addition to the sampling, continuous-record streamflow sites were established at the three sampling sites, as well as an additional site on Alenaio Stream at altitude of 75 feet and 0.47 miles upstream from the sampling site. Stage was measured continuously at 15-minute intervals at these sites. Discharge, for any particular instant, or for selected periods of time, were computed based on a stage-discharge relation determined from individual discharge measurements. Continuous records of discharge were computed at the two sites on Waiakea Stream and the upper site on Aleniao Stream. Due to non-ideal hydraulic conditions within the channel of Alenaio Stream, a continuous record of discharge was not computed at the lower site on Alenaio Stream where samples were taken. Samples were analyzed for suspended sediment, and the nutrients total nitrogen, dissolved nitrite plus nitrate, and total phosphorus. Concentration data were converted to instantaneous load values: loads are the product of discharge and concentration, and are presented as tons per day for suspended sediment or pounds per day for nutrients. Daily-mean loads were computed by estimating concentrations relative to discharge using graphical constituent loading analysis techniques. Daily-mean loads were computed at the two Waiakea Stream sampling sites for the analyzed constituents, during the period October 1, 2003 to September 30, 2005. No record of daily-mean load was computed for the Alenaio Stream sampling site due to the problems with computing a discharge record. The maximum daily-mean loads for the upper site on Waiakea Stream for suspended sediment was 79 tons per day, and the maximum daily-mean loads for total nitrogen, dissolved nitrite plus nitrate, and total phosphorus were 1,350, 13, and 300 pounds per day, respectively. The maximum daily-mean loads for the lower site on Waiakea Stream for suspended sediment was 468 tons per day, and the maximum daily-mean loads for total nitrogen, nitrite plus nitrate, and total phosphorus were 913, 8.5, and 176 pounds per day, respectively. From the estimated continuous daily-mean load record, all of the maximum daily-mean loads occurred during October 2003 and September 2004, except for suspended sediment load for the lower site, which occurred on September 15, 2005. Maximum values were not all caused by a single storm event. Overall, the record of daily-mean loads showed lower loads during storm events for suspended sediments and nutrients at the downstream site of Waiakea Stream during 2004 than at the upstream site. During 2005, however, the suspended sediment loads were higher at the downstream site than the upstream site. Construction of a flood control channel between the two sites in 2005 may have contributed to the change in relative suspended-sediment loads.

Long-term CO2 production following permafrost thawing

Treesearch

B. Elberling; A. Michelsen; C. Schadel; E.A.G. Schuur; H.H. Christiansen; L. Berg; M.P. Tamstorf; C. Sigsgaard

2013-01-01

Thawing permafrost represents a poorly understood feedback mechanism of climate change in the Arctic, but with a potential impact owing to stored carbon being mobilized1–5. We have quantified the long-term loss of carbon (C) from thawing permafrost in Northeast Greenland from 1996 to 2008 by combining repeated sediment sampling to assess changes...

Macroscopic biofilms in fracture-dominated sediment that anaerobically oxidize methane

USGS Publications Warehouse

Briggs, B.R.; Pohlman, J.W.; Torres, M.; Riedel, M.; Brodie, E.L.; Colwell, F.S.

2011-01-01

Methane release from seafloor sediments is moderated, in part, by the anaerobic oxidation of methane (AOM) performed by consortia of archaea and bacteria. These consortia occur as isolated cells and aggregates within the sulfate-methane transition (SMT) of diffusion and seep-dominant environments. Here we report on a new SMT setting where the AOM consortium occurs as macroscopic pink to orange biofilms within subseafloor fractures. Biofilm samples recovered from the Indian and northeast Pacific Oceans had a cellular abundance of 10 7 to 10 8 cells cm -3. This cell density is 2 to 3 orders of magnitude greater than that in the surrounding sediments. Sequencing of bacterial 16S rRNA genes indicated that the bacterial component is dominated by Deltaproteobacteria, candidate division WS3, and Chloroflexi, representing 46%, 15%, and 10% of clones, respectively. In addition, major archaeal taxa found in the biofilm were related to the ANME-1 clade, Thermoplasmatales, and Desulfurococcales, representing 73%, 11%, and 10% of archaeal clones, respectively. The sequences of all major taxa were similar to sequences previously reported from cold seep environments. PhyloChip microarray analysis detected all bacterial phyla identified by the clone library plus an additional 44 phyla. However, sequencing detected more archaea than the PhyloChip within the phyla of Methanosarcinales and Desulfurococcales. The stable carbon isotope composition of the biofilm from the SMT (-35 to-43%) suggests that the production of the biofilm is associated with AOM. These biofilms are a novel, but apparently widespread, aggregation of cells represented by the ANME-1 clade that occur in methane-rich marine sediments. ?? 2011, American Society for Microbiology.

A survey of microbial community diversity in marine sediments impacted by petroleum hydrocarbons from the Gulf of Mexico and Atlantic shorelines, Texas to Florida

USGS Publications Warehouse

Lisle, John T.; Stellick, Sarah H.

2011-01-01

Microbial community genomic DNA was extracted from sediment samples collected along the Gulf of Mexico and Atlantic coasts from Texas to Florida. Sample sites were identified as being ecologically sensitive and (or) as having high potential of being impacted by Macondo-1 (M-1) well oil from the Deepwater Horizon blowout. The diversity within the microbial communities associated with the collected sediments provides a baseline dataset to which microbial community-diversity data from impacted sites could be compared. To determine the microbial community diversity in the samples, genetic fingerprints were generated and compared. Specific sequences within the community genomic DNA were first amplified using the polymerase chain reaction (PCR) with a primer set that provides possible resolution to the species level. A second nested PCR was performed on the primary PCR products using a primer set on which a GC-clamp was attached to one of the primers. The nested PCR products were separated using denaturing-gradient gel electrophoresis (DGGE) that resolves the nested PCR products based on sequence dissimilarities (or similarities), forming a genomic fingerprint of the microbial diversity within the respective samples. Samples with similar fingerprints were grouped and compared to oil-fingerprint data from the same sites (Rosenbauer and others, 2011). The microbial community fingerprints were generally grouped into sites that had been shown to contain background concentrations of non-Deepwater Horizon oil. However, these groupings also included sites where no oil signature was detected. This report represents some of the first information on naturally occurring microbial communities in sediment from shorelines along the Gulf of Mexico and Atlantic coasts from Texas to Florida.

Polychlorinated biphenyls in aquatic invertebrates and fish and observations about nitrogen and carbon isotope composition in relation to trophic structure and bioaccumulation patterns, Lake Worth and Meandering Road Creek, Fort Worth, Texas, 2007-08

USGS Publications Warehouse

Moring, J. Bruce

2010-01-01

During 2007-08 the U.S. Geological Survey, in cooperation with the U.S. Air Force, evaluated the concentration of polychlorinated biphenyls (PCBs) in aquatic invertebrates and fish from one site in the main body of Lake Worth, two sites in a small inlet in Lake Worth (upper and lower Woods Inlet), and one site in Meandering Road Creek in Fort Worth, Texas. The four sites sampled during 2007-08 were located at or near sites where surficial bed-sediment samples had been collected and analyzed for PCBs during previous U.S. Geological Survey studies so that PCB concentrations in aquatic invertebrates and fish and PCB concentrations in surficial bed-sediment samples could be compared. Stable nitrogen and carbon isotopes were used to help assess differences in the amount of these isotopes by species and sampling location. The sum of 15 PCB-congener concentrations was highest for aquatic invertebrates and fish from the upper Woods Inlet site and lowest for the same aquatic invertebrates and fish from Lake Worth site, where PCBs historically had not been detected in lake bed sediment. An increase in the ratio of the heavier nitrogen-15 (15N) isotope to the lighter nitrogen-14 (14N) isotope, referred to as enrichment of 15N, was highest in largemouth bass (representing the highest trophic level sampled) at all sites and lowest for true midge larvae inhabiting surficial bed sediment in the lake (representing the lowest trophic level sampled). Enrichment of 15N was less variable in largemouth bass and other fish from the highest trophic level compared with shorter lived, primary consumer invertebrates from lower trophic levels, such as true midge larvae, mayfly nymphs, and zooplankton. The delta carbon-13 (delta13C) values measured in true midge larvae collected at the Lake Worth and upper and lower Woods Inlet sites were more negative compared with the delta13C values measured for all other taxa, indicating true midge larvae were more depleted of carbon-13 (13C) compared with all other aquatic invertebrate and fish. The relative depletion of 13C might indicate the carbon sources consumed by true midge larvae are different from the carbon sources consumed by all other taxon that were sampled. Ratios of stable nitrogen isotopes nitrogen-15 to nitrogen-14 (delta15N) were similar between taxa from the Lake Worth site and Woods Inlet sites. The sum of 15 PCB-congener concentrations, however, was an order of magnitude higher in largemouth bass from the upper Woods Inlet site, indicating that PCB-congener concentrations in lake bed sediment likely controls biomagnification within the lake because of the similarities in trophic structure of the resident aquatic community. The biota at the Lake Worth reference site, where PCBs were not detected in the surficial sediment during previous studies, were less contaminated than the biota at sites where PCBs had been detected in the surficial sediment. The highest trophic-level consumers (as evidenced by the most 15N-enriched delta15N values) showed the maximum bioaccumulation.

River-plume sedimentation and 210Pb/7Be seabed delivery on the Mississippi River delta front

NASA Astrophysics Data System (ADS)

Keller, Gregory; Bentley, Samuel J.; Georgiou, Ioannis Y.; Maloney, Jillian; Miner, Michael D.; Xu, Kehui

2017-06-01

To constrain the timing and processes of sediment delivery and submarine mass-wasting events spanning the last few decades on the Mississippi River delta front, multi-cores and gravity cores (0.5 and <3 m length respectively) were collected seaward of the Mississippi River Southwest Pass in 25-75 m water depth in 2014. The cores were analyzed for radionuclide activity (7Be, 210Pb, 137Cs), grain size, bulk density, and fabric (X-radiography). Core sediments are faintly bedded, sparsely bioturbated, and composed mostly of clay and fine silt. Short-term sedimentation rates (from 7Be) are 0.25-1.5 mm/day during river flooding, while longer-term accumulation rates (from 210Pb) are 1.3-7.9 cm/year. In most cores, 210Pb activity displays undulatory profiles with overall declining activity versus depth. Undulations are not associated with grain size variations, and are interpreted to represent variations in oceanic 210Pb scavenging by river-plume sediments. The 210Pb profile of one gravity core from a mudflow gully displays uniform basal excess activity over a zone of low and uniform bulk density, interpreted to be a mass-failure event that occurred 9-18 years before core collection. Spatial trends in sediment deposition (from 7Be) and accumulation (from 210Pb) indicate that proximity to the river mouth has stronger influence than local facies (mudflow gully, depositional lobe, prodelta) over the timeframe and seabed depth represented by the cores (<40 years, <3 m length). This may be explained by rapid proximal sediment deposition from river plumes coupled with infrequent tropical cyclone activity near the delta in the last 7 years (2006-2013), and by the location of most sediment failure surfaces (from mass flows indicated by parallel geophysical studies) deeper than the core-sampling depths of the present study.

A screening level probabilistic ecological risk assessment of PAHs in sediments of San Francisco Bay

DOE Office of Scientific and Technical Information (OSTI.GOV)

Febbo, E.J.; Arnold, W.R.; Biddinger, G.R.

1995-12-31

As part of the Regional Monitoring Program administered by the San Francisco Estuary Institute (SFEI), sediment samples were collected at 20 stations in San Francisco Bay and analyzed to determine concentrations of 43 PAHs. These data were obtained from SFEI and used to calculate the potential risk to aquatic organisms using probabilistic modeling and Monte Carlo statistical procedures. Sediment chemistry data were used in conjunction with a sediment equilibrium model, a bioconcentration model, biota-sediment accumulation factors, and critical body burden effects concentrations to assess potential risk to bivalves. Bivalves were the chosen receptors because they lack a well-developed enzymatic systemmore » for metabolizing PAHs. Thus, they more readily accumulate PAHs and represent a species at greater risk than other taxa, such as fish and crustaceans. PAHs considered in this study span a broad range of octanol-water partition coefficients. Results indicate that risk of non-polar narcotic effects from PAHs was low in the Northern Bay Area, but higher in the South Bay near the more urbanized sections of the drainage basin.« less

Shipboard surveys track magnetic sources in marine sediments--geophysical studies of the Stono and North Edisto Inlets near Charleston, South Carolina

USGS Publications Warehouse

Shah, Anjana K.; Harris, M. Scott

2012-01-01

Magnetic field data are traditionally used to analyze igneous and metamorphic rocks, but recent efforts have shown that magnetic sources within sediments may be detectable, suggesting new applications for high-resolution magnetic field surveys. Candidates for sedimentary sources include heavy mineral sand concentrations rich in magnetite or hematite, alteration-induced glauconite, or biogenic magnetite. Magnetic field surveys can be used to map the distributions of such sources with much denser and more widespread coverage than possible by sampling. These data can then provide constraints on the composition history of local sediments. Mapping such sediments requires the sensor to be relatively close to the source, and filtering approaches may be needed to distinguish signals from both system noise and deeper basement features. Marine geophysical surveys conducted in July, 2010, over the Stono and North Edisto River inlets and their riverine inputs south of Charleston, South Carolina, showed 10- to 40-m-wide, 1- to 6-nT magnetic anomalies associated with shallow, sand-covered seabed. These anomalies are distinct from system noise but are too narrow to represent basement features. The anomalies are present mostly in shallow areas where river sediments originating from upland areas enter the inlets. Surface grab samples from the North Edisto River contain trace amounts of heavy mineral sediments including hematite, maghemite, ilmenite, and magnetite, as well as garnet, epidote, zircon, and rutile. Previous stream sediment analyses show enhanced titanium over much of the Atlantic Coastal Plain. The combined data suggest that the anomalies are generated by titanium- and iron-rich heavy mineral sands ultimately originating from the Piedmont and Blue Ridge provinces, which are then reworked and concentrated by tidal currents.

Correlation of Miocene strata on the submarine St. Croix Ridge and onland St. Croix, US Virgin Islands

NASA Astrophysics Data System (ADS)

von Salis, Katharina; Speed, Robert

1995-03-01

The nannofossils of an hydraulic piston core from the steep scarp between the St. Croix Ridge and Virgin Islands Basin were restudied. Formerly thought to represent a Pliocene debris flow, we interpret it as an early Miocene (NN1/2) hemipelagic deposit. We correlate the seismic unit sampled by piston core with the Kingshill-Jealousy Formation present on St. Croix. These sediments likely belong to an extensive, thick, deep marine cover of the St. Croix Ridge, deposited on a metamorphic—igneous basement between early Eocene and early Miocene time. Faulting did not evidently affect this sediment cover until the late Neogene.

Evaluation of stream sediments in areas of known mineralization, San Jose and Talamanca Quadrangles, Costa Rica: An orientation survey

DOE Office of Scientific and Technical Information (OSTI.GOV)

Arauz, A.J.

1986-12-01

Costa Rica's compressional island arc-type tectonic setting and considerable geologic diversity hold great promise for future discovery of economic metallic deposits. The study constitutes an orientation investigation of stream sediment sampling techniques to establish optimum survey specifications for the regional geochemical survey coverage of the country. The study was conducted in two separate areas of known mineralization which represent distinctive tropical environments and different metallogenic provinces within Costa Rica: (1) the Esparza Area, which contains the Santa Clara Gold Mine, the largest in the country, and (2) the San Isidro Area, which contains a major copper prospect.

Spatial and Temporal Patterns of Suspended Sediment Yields in Nested Urban Catchments

NASA Astrophysics Data System (ADS)

Kemper, J. T.; Miller, A. J.; Welty, C.

2017-12-01

In a highly regulated area such as the Chesapeake Bay watershed, suspended sediment is a matter of primary concern. Near real-time turbidity and discharge data have been collected continuously for more than four years at five stream gages representing three nested watershed scales (1-2 sq km, 5-6 sq km, 14 sq km) in the highly impervious Dead Run watershed, located in Baltimore County, MD. Using turbidity-concentration relationships based on sample analyses at the gage site, sediment yields for each station can be quantified for a variety of temporal scales. Sediment yields have been calculated for 60+ different storms across four years. Yields show significant spatial variation, both at equivalent sub-watershed scales and from headwaters to mouth. Yields are higher at the headwater station with older development and virtually no stormwater management (DR5) than at the station with more recent development and more extensive stormwater management (DR2). However, this pattern is reversed for the stations at the next larger scale: yields are lower at DR4, downstream of DR5, than at DR3, downstream of DR2. This suggests spatial variation in the dominant sediment sources within each subwatershed. Additionally, C-Q hysteresis curves display consistent counterclockwise behavior at the DR4 station, in contrast to the consistent clockwise behavior displayed at the DR3 station. This further suggests variation in dominant sediment sources (perhaps distal vs local, respectively). We observe consistent seasonal trends in the relative magnitudes of sediment yield for different subwatersheds (e.g. DR3>DR4 in summer, DR5>DR2 in spring). We also observe significant year-to-year variation in sediment yield at the headwater and intermediate scales, whereas yields at the 14 sq km scale are largely similar across the monitored years. This observation would be consistent with the possibility that internal storage and remobilization tend to modulate downstream yields even with spatial and temporal variation in upstream sources. The fine-scale design of this study represents a unique opportunity to compare and contrast sediment yields across a variety of spatial and temporal scales, and provide insight into sediment transport dynamics within an urbanized watershed.

Provenance, Source Rock Characteristics And Paleoweathering Conditions Of The Nearshore Continental Sediments Off Pondicherry, South East Coast Of India

NASA Astrophysics Data System (ADS)

Natarajan, T.; Seshachalam, S.; Ponniah, J.; Varadhan, R.; M, S.

2008-05-01

Geochemical studies, comprising major elements and trace elements, including the Rare Earth Elements (REE), have been carried out on the modern sediments of inner continental shelf representing nearshore marine environments. Concentrations were normalized with Chondrite and PAAS show LREE enriched and flat HREE patterns with slight positive Eu anomaly which is due to the influence of feldspar rich source materials. The LREE enriched and flat HREE patterns with positive Eu anomaly have been considered as the typical character of post- Archaean Sediments. The La/Th ratio ranges from 1.66 to 8.84 with an average value of 4.09, which indicates a heterogenitic source for the sediments of the study area. The La-Th-Sc ternary plot suggests all the samples fall close to the field dominated by tonalite to granite and away from the basalt and komatiite compositions and appear to be derived from sources enriched in felsic components. The transition metal ratios such as Cr/V, Ni/CO and V/Ni indicate both Archaean and Post-Archaean nature to the sediments indicating that the sediments have been derived from heterogenitic sources. The ternary diagram plot of Th-Hf-Co and La-Th-Sc falls in the field of upper continental crust of post Archaean age. This clearly indicates the terrestrial source for the sediments from the nearby landmass. The data are slightly offset from the upper crustal composition away from the Hf apex. This is probably a result of Zircon concentration. Geochemical data have also helped in ascertaining the weathering trends. The Chemical Index of Alteration (CIA) has been used to quantify the degree of weathering. The calculated CIA values for sediments demonstrate both low CIA values of less than 50 percent (low silicate weathering) and intermediate CIA values (60-70 percent) indicating that the sediments are possibly the product of sedimentary and metasedimentary rocks that have undergone intermediate chemical weathering. On an A—CN—K diagram, the data fall closer to the trend parallel to Al2O3 (CaO*+Na2O) join, suggesting that the sediments represent weathered products from granite and charnockite.

Metabolic Potential of Microbial Genomes Reconstructed from a Deep-Sea Oligotrophic Sediment Metagenome

NASA Astrophysics Data System (ADS)

Tully, B. J.; Huber, J. A.; Heidelberg, J. F.

2016-02-01

The South Pacific Gyre (SPG) possesses the lowest rates of sedimentation, surface chlorophyll concentration and primary productivity in the global oceans, making it one of the most oligotrophic environments on earth. As a direct result of the low-standing biomass in surface waters, deep-sea sediments are thin and contain small amount of labile organic carbon. It was recently shown that the sediment column within the SPG is fully oxic through to the underlying basalt basement and may be representative of 9-37% of the global marine environment. In addition, it appears that approximately 50% of the total organic carbon is removed from the oligotrophic sediments within the first 20 centimeters beneath the sea floor (cmbsf). To understand the microbial processes that contribute to the removal of the labile organic matter, metagenomic sequencing and analysis was carried out on a sample of sediment collected from 0-5 cmbsf from SPG site 10 (U1369). Analysis of 9 partially reconstructed environmental genomes revealed that the members of the SPG surface sediment microbial community are phylogenetically distinct from surface/upper ocean organisms, with deep branches within the Alpha- and Gammaproteobacteria, Nitrospirae, Nitrospina, the phylum NC10, and several unique phylogenetic groups. Within these partially complete genomes there is evidence for microbially mediated metal (iron/manganese) oxidation and carbon fixation linked to the nitrification. Additionally, despite low sedimentation and hypothesized energy-limitation, members of the SPG microbial community had motility and chemotactic genes and possessed mechanisms for the utilization of high molecular weight organic matter, including exoproteases and peptide specific membrane transporters. Simultaneously, the SPG genomes showed a limited potential for the degradation of recalcitrant carbon compounds. Finally, the presence of putative genes with functions involved with denitrification and the consumption of C1 compounds suggest that there may be microenvironments in the surface sediments were microbes can deplete oxygen concentrations to hypoxic/anoxic levels. This study represents an important first analysis in understanding how microorganisms in oligotrophic sediments impact deep-sea carbon transformations.

Comparing PAH availability from manufactured gas plant soils and sediments with chemical and biological tests. 1. PAH release during water desorption and supercritical carbon dioxide extraction.

PubMed

Hawthorne, Steven B; Poppendieck, Dustin G; Grabanski, Carol B; Loehr, Raymond C

2002-11-15

Soil and sediment samples from oil gas (OG) and coal gas (CG) manufactured gas plant (MGP) sites were selected to represent a range of PAH concentrations (150-40,000 mg/kg) and sample matrix compositions. Samples varied from vegetated soils to lampblack soot and had carbon contents from 3 to 87 wt %. SFE desorption (120 min) and water/XAD2 desorption (120 days) curves were determined and fit with a simple two-site model to determine the rapid-released fraction (F) for PAHs ranging from naphthalene to benzo[ghi]perylene. F values varied greatly among the samples, from ca. 10% to >90% for the two- and three-ring PAHs and from <1% to ca. 50% for the five- and six-ring PAHs. Release rates did not correlate with sample matrix characteristics including PAH concentrations, elemental composition (C, H, N, S), or "hard" and "softs" organic carbon, indicating that PAH release cannot easily be estimated on the basis of sample matrix composition. Fvalues for CG site samples obtained with SFE and water desorption agreed well (linear correlation coefficient, r2 = 0.87, slope = 0.93), but SFE yielded higher F values for the OG samples. These behaviors were attributed to the stronger ability of carbon dioxide than water to desorb PAHs from the highly aromatic (hard) carbon of the OG matrixes, while carbon dioxide and water showed similar abilities to desorb PAHs from the more polar (soft) carbon of the CG samples. The combined SFE and water desorption approaches should improve the understanding of PAH sequestration and release from contaminated soils and sediments and provide the basis for subsequent studies using the same samples to compare PAH release with PAH availability to earthworms.

Suspended Sediment in the Indiana Harbor Canal and the Grand Calumet River, Northwestern Indiana, May 1996-June 1998

USGS Publications Warehouse

Renn, Danny E.

2000-01-01

Suspended-sediment samples and streamflow data were collected from May 1996 through June 1998 at three sites in the Grand Calumet River Basin - Indiana Harbor Canal at East Chicago, the east branch of the Grand Calumet River at Gary, and the west branch of the Grand Calumet River at Hammond. Sample analysis allowed for retention of sediments of 0.0015 millimeters or larger. At Indiana Harbor Canal at East Chicago, an automated sampler collected 2,005 suspended-sediment samples from the canal and, of these, 1,856 had associated streamflow values. To evaluate any bias between instream concentrations of suspended sediment and samples collected by the automated sampler, 27 sets of suspended-sediment samples were collected manually in the canal at the same time samples were collected by the automated sampler. There was no consistent bias between the samples collected manually instream and the samples collected by the automated sampler; therefore, no correction factor was applied to the concentrations of suspended sedment for the samples collected by the automated sampler. For the 2,005 and 1,856 samples, the mean suspended-sediment concentrations were the same, 15 milligrams per liter (mg/L), and the range in suspended-sediment concentrations were the same, from less than 1 mg/L to 97 mg/L. No apparent relation between the concentration of suspended sediment measured in samples from the Indiana Harbor Canal and streamflow was indicated, probably because of complex hydraulic conditions in the study area; most of the streamflow is from industrial and municipal discharges, and streamflow is affected by changes in water levels in Lake Michigan. There did appear to be a seasonal trend in the concentrations of suspended sediment, however, in that the largest concentrations generally were measured during the spring. During the study, four substantial rainfall events were recorded. Only for a rainfall event of 4.20 inches was there a substantial increase in the concentrations of suspended sediment and streamflow in the Indiana Harbor Canal. Six sets of samples were collected from the canal for determination of the percentage of organic material in the suspended sediment. Organic material in these samples averaged 26 percent. Bedload-sediment samples were collected three times in the canal with a bedload-sediment sampler; the collection-bag mesh size was 0.25 millimeter. No bedload sediments were collected in the sampler for any of the sample collections. Seven suspended-sediment samples were collected from the Grand Calumet River at Gary and at Hammond. The mean suspended sediment concentration measured in samples collected at Gary was 13 mg/L, and the mean suspended-sediment concentration measured in samples collected at Hammond was 6 mg/L. For both sites, there was no apparent relation between the concentration of suspended sediment and streamflow. Four suspended sediment samples were collected from the Grand Calumet River at Gary and at Hammond for determination of the percentage of organic material. The amount of organic material at Gary averaged 35 percent, and the amount of organic material at Hammond averaged 34 percent. The concentrations of suspended sediment determined for samples collected from the Indiana Harbor Canal and from the Grand Calumet River are less than concentrations of suspended sediment in samples collected from other streams in northwestern Indiana and in other parts of the State. Loads of suspended sediment were computed as the product of the weekly mean suspended-sediment concentration and the daily average streamflow for the Indiana Harbor Canal at East Chicago. The average suspended-sediment load computed for the canal was 29 tons per day for the first year of the study (June 1996 through May 1997) and 23 tons per day for the second year of the study (June 1997 through May 1998). Loads of suspended sediment for the Grand Calumet River at Gary and at Hammond were estimated by use of the ratin

Importance of geology to fisheries management: Examples from the northeastern Gulf of Mexico

USGS Publications Warehouse

Scanlon, Kathryn M.; Koenig, C.C.; Coleman, F.C.; Miller, M.

2003-01-01

Seafloor mapping of shelf-edge habitats in the northeastern Gulf of Mexico demonstrates how sidescan-sonar imagery, seismic-reflection profiling, video data, geologic mapping, sediment sampling, and understanding the regional geologic history can enhance, support, and guide traditional fisheries research and management. New data from the Madison Swanson and Steamboat Lumps Marine Reserves reveal complex benthic habitats consisting of high-relief calcareous pinnacles, low-relief karstic hardbottom, rocky outcrops several kilometers in length, and variable thickness of fine-grained and apparently mobile coarse-grained sediments. Our data also show that certain fish alter the landscape by clearing sediment from hardbottom areas (e.g., red grouper Epinephelus morio) and by burrowing extensively in fine-grained sediment (e.g., tilefish Lopholatilus chamaeleonticeps). The seafloor imagery and geologic maps show that (a) sea level fluctuations played a dominant role in the development of the present-day regional geology, and (b) habitats (and benthic communities) are tied closely to geologic character. Understanding the geologic setting allowed for efficient and representative sampling of the biology. The geologic data can be used to set meaningful boundaries for fishery reserves and to help predict habitats in areas that are not well mapped. This interdisciplinary work added value to traditional research disciplines by providing management with integrated tools to make better decisions. 

Rock Magnetic Investigation of Soils and Sediments Overlying the Hydrocarbon-Bearing Silurian Pinnacle Reefs in the Michigan Basin

NASA Astrophysics Data System (ADS)

Smirnov, A. V.; Tresnak, J. P.; Anderson, K. L.

2017-12-01

Hydrocarbon reservoirs may be associated with significant magnetic anomalies arguably caused by diagenetic alteration of iron-bearing minerals in hydrocarbon seepage environments. However, complete understanding of the physical mechanisms and pathways of hydrocarbon-induced magnetic alteration requires a robust and representative observational database. In order to facilitate the fundamental understanding of the magnetic signature of hydrocarbons, we conducted an investigation of the relationship between the hydrocarbon migration and magnetic properties of sediments overlaying the oil-bearing formations of the Silurian northern pinnacle reef belt of the Michigan Basin. Several hundreds of near-surface soil and sediment samples were collected across several long transects across the trend of the Niagaran Reef System and represented areas both over and away from known hydrocarbon sources. The samples were investigated by a variety of microscopy and rock magnetic methods. Our data indicate that the relationship between the hydrocarbon reservoirs and low-field magnetic susceptibility over the Niagaran pinnacle reef belt in the Michigan Basin is not straightforward. Both very high and very low susceptibility values have been observed within the extent of the reef belt in the studied area. The observed magnetic susceptibility anomalies may reflect the hydrological gradients in the uppermost glaciofluvial aquifer. However, a good correlation with the Devonian hydrocarbon reservoirs outside of the reef belt indicates a potential of the surface magnetic susceptibility method for hydrocarbon detection at a smaller scale.

The Ability of Microbial Community of Lake Baikal Bottom Sediments Associated with Gas Discharge to Carry Out the Transformation of Organic Matter under Thermobaric Conditions

PubMed Central

Bukin, Sergei V.; Pavlova, Olga N.; Manakov, Andrei Y.; Kostyreva, Elena A.; Chernitsyna, Svetlana M.; Mamaeva, Elena V.; Pogodaeva, Tatyana V.; Zemskaya, Tamara I.

2016-01-01

The ability to compare the composition and metabolic potential of microbial communities inhabiting the subsurface sediment in geographically distinct locations is one of the keys to understanding the evolution and function of the subsurface biosphere. Prospective areas for study of the subsurface biosphere are the sites of hydrocarbon discharges on the bottom of the Lake Baikal rift, where ascending fluxes of gas-saturated fluids and oil from deep layers of bottom sediments seep into near-surface sediment. The samples of surface sediments collected in the area of the Posolskaya Bank methane seep were cultured for 17 months under thermobaric conditions (80°C, 5 MPa) with the addition of complementary organic substrate, and a different composition for the gas phase. After incubation, the presence of intact cells of microorganisms, organic matter transformation and the formation of oil biomarkers was confirmed in the samples, with the addition of Baikal diatom alga Synedra acus detritus, and gas mixture CH4:H2:CO2. Taxonomic assignment of the 16S rRNA sequence data indicates that the predominant sequences in the enrichment were Sphingomonas (55.3%), Solirubrobacter (27.5%) and Arthrobacter (16.6%). At the same time, in heat-killed sediment and in sediment without any additional substrates, which were cultivated in a CH4 atmosphere, no geochemical changes were detected, nor the presence of intact cells and 16S rRNA sequences of Bacteria and Archaea. This data may suggest that the decomposition of organic matter under culturing conditions could be performed by microorganisms from low-temperature sediment layers. One possible explanation of this phenomenon is migration of the representatives of the deep thermophilic community through fault zones in the near surface sediment layers, together with gas-bearing fluids. PMID:27242716

The Ability of Microbial Community of Lake Baikal Bottom Sediments Associated with Gas Discharge to Carry Out the Transformation of Organic Matter under Thermobaric Conditions.

PubMed

Bukin, Sergei V; Pavlova, Olga N; Manakov, Andrei Y; Kostyreva, Elena A; Chernitsyna, Svetlana M; Mamaeva, Elena V; Pogodaeva, Tatyana V; Zemskaya, Tamara I

2016-01-01

The ability to compare the composition and metabolic potential of microbial communities inhabiting the subsurface sediment in geographically distinct locations is one of the keys to understanding the evolution and function of the subsurface biosphere. Prospective areas for study of the subsurface biosphere are the sites of hydrocarbon discharges on the bottom of the Lake Baikal rift, where ascending fluxes of gas-saturated fluids and oil from deep layers of bottom sediments seep into near-surface sediment. The samples of surface sediments collected in the area of the Posolskaya Bank methane seep were cultured for 17 months under thermobaric conditions (80°C, 5 MPa) with the addition of complementary organic substrate, and a different composition for the gas phase. After incubation, the presence of intact cells of microorganisms, organic matter transformation and the formation of oil biomarkers was confirmed in the samples, with the addition of Baikal diatom alga Synedra acus detritus, and gas mixture CH4:H2:CO2. Taxonomic assignment of the 16S rRNA sequence data indicates that the predominant sequences in the enrichment were Sphingomonas (55.3%), Solirubrobacter (27.5%) and Arthrobacter (16.6%). At the same time, in heat-killed sediment and in sediment without any additional substrates, which were cultivated in a CH4 atmosphere, no geochemical changes were detected, nor the presence of intact cells and 16S rRNA sequences of Bacteria and Archaea. This data may suggest that the decomposition of organic matter under culturing conditions could be performed by microorganisms from low-temperature sediment layers. One possible explanation of this phenomenon is migration of the representatives of the deep thermophilic community through fault zones in the near surface sediment layers, together with gas-bearing fluids.

Diversity, Biogeography, and Biodegradation Potential of Actinobacteria in the Deep-Sea Sediments along the Southwest Indian Ridge

PubMed Central

Chen, Ping; Zhang, Limin; Guo, Xiaoxuan; Dai, Xin; Liu, Li; Xi, Lijun; Wang, Jian; Song, Lei; Wang, Yuezhu; Zhu, Yaxin; Huang, Li; Huang, Ying

2016-01-01

The phylum Actinobacteria has been reported to be common or even abundant in deep marine sediments, however, knowledge about the diversity, distribution, and function of actinobacteria is limited. In this study, actinobacterial diversity in the deep sea along the Southwest Indian Ridge (SWIR) was investigated using both 16S rRNA gene pyrosequencing and culture-based methods. The samples were collected at depths of 1662–4000 m below water surface. Actinobacterial sequences represented 1.2–9.1% of all microbial 16S rRNA gene amplicon sequences in each sample. A total of 5 actinobacterial classes, 17 orders, 28 families, and 52 genera were detected by pyrosequencing, dominated by the classes Acidimicrobiia and Actinobacteria. Differences in actinobacterial community compositions were found among the samples. The community structure showed significant correlations to geochemical factors, notably pH, calcium, total organic carbon, total phosphorus, and total nitrogen, rather than to spatial distance at the scale of the investigation. In addition, 176 strains of the Actinobacteria class, belonging to 9 known orders, 18 families, and 29 genera, were isolated. Among these cultivated taxa, 8 orders, 13 families, and 15 genera were also recovered by pyrosequencing. At a 97% 16S rRNA gene sequence similarity, the pyrosequencing data encompassed 77.3% of the isolates but the isolates represented only 10.3% of the actinobacterial reads. Phylogenetic analysis of all the representative actinobacterial sequences and isolates indicated that at least four new orders within the phylum Actinobacteria were detected by pyrosequencing. More than half of the isolates spanning 23 genera and all samples demonstrated activity in the degradation of refractory organics, including polycyclic aromatic hydrocarbons and polysaccharides, suggesting their potential ecological functions and biotechnological applications for carbon recycling. PMID:27621725

Understanding catchment scale sediment sources using geochemical tracers

NASA Astrophysics Data System (ADS)

Ferreira, Carla S. S.; Walsh, Rory P. D.; Shakesby, Richard A.; Steenhuis, Tammo S.; Ferreira, António J. D.; Coelho, Celeste O. A.

2013-04-01

It is well-established that urbanization leads to increased erosion (at least locally) as well as enhanced overland flow and streamflow peaks. Less is known about how the spatial distribution of erosion sources and scale of increases in erosion vary with the nature of urbanization in different climatic and socio-economic settings. This is important in order to prevent or reduce adverse impacts of erosion on downstream sedimentation, channel siltation and shifting, and river pollution. This paper adopts a sediment fingerprinting approach to assess the impact of partial urbanization and associated land-use change on sediment sources within a peri-urban catchment (6 km2), Ribeira dos Covões on the outskirts of the city of Coimbra in central Portugal. Urban land-use has increased from just 6% in 1958 to 30% in 2009. The urban pattern includes some well-defined urban residential centres, but also areas of discontinuous urban sprawl, including educational, health and small industrial facilities, numerous new roads and an enterprise park is under construction on the upper part of the catchment. The catchment has a wet Mediterranean climate and the lithology comprises sandstone in the west and limestone in the east. Soil depth is generally >40cm. The average slope angle is 8° (maximum 47°). Altitude ranges from 30m to 205m. A sediment fingerprinting approach was adopted to help establish the relative importance of sediment inputs from different urban areas. During September 2012 current bed-sediment samples (0-3 cm depth) were collected from 11 channel sites along the main stream and in different tributaries. At sites where bed-sediment was deeper, additional samples were taken at 3cm intervals to a maximum depth of around 42cm. In addition, overbank sediment samples (0-3cm depth) were collected at 11 locations around the catchment. All samples were oven-dried (at 38°C) and different particle size fractions (0.125-2mm, 0.063-0.125mm and <0.063mm) obtained, where the <0.063mm fraction was considered equivalent to the suspended sediment load during storm events. The elemental composition (33 elements) of each fraction was assessed using a Niton X-ray fluorescence analyzer. The results were used to identify distinctive composite signatures of each tributary catchment and their influence on the geochemistry of the catchment outlet bed-sediment was explored. An unmixing model was applied to estimate the relative contribution of each tributary to channel-stored sediment at the catchment outlet. Many of the chemical elements analysed, including Zr, Sr, Zn and Ti, showed significant differences between sandstone and limestone areas. The closeness of values at the catchment outlet to those of sandstone stream bed-sediment indicates that most of the current catchment erosion is derived from the sandstone area. This is supported by the higher measured discharges and suspended sediment concentrations in storm events from the latter. Eroded sediments from urban areas still under construction also showed distinctive characteristics. It is concluded that this methodology represents a potentially useful tool for river managers and policy-makers to detect and assess sediment sources in urbanized catchments.

Erosion processes, fluvial sediment transport, and reservoir sedimentation in a part of the Newell and Zayante Creek basins, Santa Cruz County, California

USGS Publications Warehouse

Brown, W. M.

1973-01-01

The drainage basins upstream from Loch Lomond, a water-supply reservoir on Newell Creek, and a proposed reservoir site on Zayante Creek were investigated for their characteristics with respect to the erosion, transportation, and deposition of sediment. The study area is underlain predominantly by sandstone, siltstone, and shale of Tertiary age that decompose readily into moderately deep soils, friable colluvium, and easily transported sediment particles. The Rices Mudstone and Twobar, Shale Members of the San Lorenzo Formation of Brabb (1964) underlie steep dip slopes in the study area, and probably are the most highly erodible of the several geologic units present there. However, nearly all of the geologic units have shown a propensity for accelerated erosion accompanying the disturbance of the land surface by the roadbuilding practices that predominate over other types of sediment-producing land-use activities in the study area. Sediment transport in the study area was estimated from (1) a reservoir survey of Loch Lomond in 1971 that was compared with a preconstruction survey of 1960, and (2) sampling of sediment transported in suspension by Zayante Creek during the 1970 and 1971 water years. At least 46 acre-feet of sediment accumulated in Loch Lomond in a 10-year period, and an unmeasured quantity of very fine sediment in the form of a thin layer over much of the reservoir bottom was observed. The measured quantity of deposited sediment in a 10-year period represented a sediment yield of about 1,100 tons annually per square mile of drainage basin upstream from the reservoir arms where the major deposition occurred. This sediment occupied less than i percent of the original capacity of Loch Lomond, but the volume of measured sediment deposition is probably conservative in view of the unmeasured deposits observed and a reservoir trap efficiency of about 95 percent. Sediment sampling on Zayante Creek indicated suspended-sediment yields of about 4,570 and 570 tons per square mile for the 1970 and 1971 water years. These values were considered excessive with respect to the relatively low flows during which they were measured, and probably reflect the intensive and current roadbuilding practices in the central and upstream parts of the Zayante Creek drainage in the study area.

Two-step extraction method for lead isotope fractionation to reveal anthropogenic lead pollution.

PubMed

Katahira, Kenshi; Moriwaki, Hiroshi; Kamura, Kazuo; Yamazaki, Hideo

2018-05-28

This study developed the 2-step extraction method which eluted the Pb adsorbing on the surface of sediments in the first solution by aqua regia and extracted the Pb absorbed inside particles into the second solution by mixed acid of nitric acid, hydrofluoric acid and hydrogen peroxide solution. We applied the method to sediments in the enclosed water area and found out that the isotope ratios of Pb in the second solution represented those of natural origin. This advantage of the method makes it possible to distinguish the Pb between natural origin and anthropogenic source on the basis of the isotope ratios. The results showed that the method was useful to discuss the Pb sources and that anthropogenic Pb in the sediment samples analysed was mainly derived from China because of transboundary air pollution.

Neandertal and Denisovan DNA from Pleistocene sediments.

PubMed

Slon, Viviane; Hopfe, Charlotte; Weiß, Clemens L; Mafessoni, Fabrizio; de la Rasilla, Marco; Lalueza-Fox, Carles; Rosas, Antonio; Soressi, Marie; Knul, Monika V; Miller, Rebecca; Stewart, John R; Derevianko, Anatoly P; Jacobs, Zenobia; Li, Bo; Roberts, Richard G; Shunkov, Michael V; de Lumley, Henry; Perrenoud, Christian; Gušić, Ivan; Kućan, Željko; Rudan, Pavao; Aximu-Petri, Ayinuer; Essel, Elena; Nagel, Sarah; Nickel, Birgit; Schmidt, Anna; Prüfer, Kay; Kelso, Janet; Burbano, Hernán A; Pääbo, Svante; Meyer, Matthias

2017-05-12

Although a rich record of Pleistocene human-associated archaeological assemblages exists, the scarcity of hominin fossils often impedes the understanding of which hominins occupied a site. Using targeted enrichment of mitochondrial DNA, we show that cave sediments represent a rich source of ancient mammalian DNA that often includes traces of hominin DNA, even at sites and in layers where no hominin remains have been discovered. By automation-assisted screening of numerous sediment samples, we detected Neandertal DNA in eight archaeological layers from four caves in Eurasia. In Denisova Cave, we retrieved Denisovan DNA in a Middle Pleistocene layer near the bottom of the stratigraphy. Our work opens the possibility of detecting the presence of hominin groups at sites and in areas where no skeletal remains are found. Copyright © 2017, American Association for the Advancement of Science.

Nannofossils in upper quaternary bottom sediments of back-arc basins in the southwestern Pacific

NASA Astrophysics Data System (ADS)

Dmitrenko, O. B.

2015-05-01

The analysis of calcareous nannoplankton assemblages in bottom sediments sampled during Cruise 21 of the R/V Akademik Mstislav Keldysh in three areas located in back-arc basins of the southwestern Pacific (western Woodlark in the Solomon Sea, Manus in the Bismarck Sea, Central Lau) reveal that they belong to the Emiliania huxleyi Acme Zone, the most detailed one in the Gartner's scale of 1977. The content of coccoliths and their taxonomic composition indicate warm subtropical-tropical conditions. Long cores demonstrate a decrease in species diversity reflecting the transition from the cold late Pleistocene to the Holocene. The changes in species diversity and presence/absence of thermophilic representatives indicate transformation of depositional environments with unstable conditions in the water column and bottom layer, seismic activity, and widely developed processes of sediment redistribution and reworking.

Advection of surface-derived organic carbon fuels microbial reduction in Bangladesh groundwater

PubMed Central

Mailloux, Brian J.; Trembath-Reichert, Elizabeth; Cheung, Jennifer; Watson, Marlena; Stute, Martin; Freyer, Greg A.; Ferguson, Andrew S.; Ahmed, Kazi Matin; Alam, Md. Jahangir; Buchholz, Bruce A.; Thomas, James; Layton, Alice C.; Zheng, Yan; Bostick, Benjamin C.; van Geen, Alexander

2013-01-01

Chronic exposure to arsenic (As) by drinking shallow groundwater causes widespread disease in Bangladesh and neighboring countries. The release of As naturally present in sediment to groundwater has been linked to the reductive dissolution of iron oxides coupled to the microbial respiration of organic carbon (OC). The source of OC driving this microbial reduction—carbon deposited with the sediments or exogenous carbon transported by groundwater—is still debated despite its importance in regulating aquifer redox status and groundwater As levels. Here, we used the radiocarbon (14C) signature of microbial DNA isolated from groundwater samples to determine the relative importance of surface and sediment-derived OC. Three DNA samples collected from the shallow, high-As aquifer and one sample from the underlying, low-As aquifer were consistently younger than the total sediment carbon, by as much as several thousand years. This difference and the dominance of heterotrophic microorganisms implies that younger, surface-derived OC is advected within the aquifer, albeit more slowly than groundwater, and represents a critical pool of OC for aquifer microbial communities. The vertical profile shows that downward transport of dissolved OC is occurring on anthropogenic timescales, but bomb 14C-labeled dissolved OC has not yet accumulated in DNA and is not fueling reduction. These results indicate that advected OC controls aquifer redox status and confirm that As release is a natural process that predates human perturbations to groundwater flow. Anthropogenic perturbations, however, could affect groundwater redox conditions and As levels in the future. PMID:23487743

Preliminary Results of a Modern Watershed Study from Lake Junín, Peru: Biomarker Assemblages in Terrestrial and Aquatic Plants and Surface Sediments

NASA Astrophysics Data System (ADS)

Woods, A.; Werne, J. P.; Rodbell, D. T.; Abbott, M. B.

2016-12-01

Lake Junín is a large, evaporatively-enriched lake in the central Peruvian Andes that is ideally situated to record variability in the South American Summer Monsoon, and sediment cores recovered by the Lake Junín Deep Drilling Project in 2015 span several glacial/interglacial cycles. Compound-specific stable hydrogen isotopes from leaf waxes offer the potential to reconstruct changes in monsoon strength and evapotranspiration for the entire sediment record, and can be compared with the carbonate-derived oxygen isotope record that is preserved only during interglacials. To characterize the modern proxy system, leaf samples were collected from terrestrial and aquatic species that are representative of the vegetation in the watershed. The compound distributions, concentrations, and D/H ratios of n-alkanes and n-alkanoic acids from plants and surface sediments were analyzed to develop site-specific calibrations of both terrestrial and aquatic isotopic signals, for application to downcore biomarker analyses.

Regional distribution of mercury in sediments of the main rivers of French Guiana (Amazonian basin).

PubMed

Laperche, Valérie; Hellal, Jennifer; Maury-Brachet, Régine; Joseph, Bernard; Laporte, Pierre; Breeze, Dominique; Blanchard, François

2014-01-01

Use of mercury (Hg) for gold-mining in French Guiana (up until 2006) as well as the presence of naturally high background levels in soils, has led to locally high concentrations in soils and sediments. The present study maps the levels of Hg concentrations in river sediments from five main rivers of French Guiana (Approuague River, Comté River, Mana River, Maroni River and Oyapock River) and their tributaries, covering more than 5 450 km of river with 1 211 sampling points. The maximum geological background Hg concentration, estimated from 241 non-gold-mined streams across French Guiana was 150 ng g(-1). Significant differences were measured between the five main rivers as well as between all gold-mining and pristine areas, giving representative data of the Hg increase due to past gold-mining activities. These results give a unique large scale vision of Hg contamination in river sediments of French Guiana and provide fundamental data on Hg distribution in pristine and gold-mined areas.

Magnetic signature of river sediments drained into the southern and eastern part of the South China Sea (Malay Peninsula, Sumatra, Borneo, Luzon and Taiwan)

NASA Astrophysics Data System (ADS)

Kissel, Catherine; Liu, Zhifei; Li, Jinhua; Wandres, Camille

2017-01-01

Magnetic properties of 22 river samples collected in the Malay Peninsula, Sumatra, Borneo, Luzon and Taiwan have been investigated in order to magnetically characterize the sediments drained and deposited into the South China Sea. The geological formations as well as the present climatic conditions are different from one region to another. Laboratory analyses include low-field magnetic susceptibility, anhysteretic (ARM) and isothermal (IRM) remanent magnetizations acquisition and decay, back-field acquisition, thermal demagnetization of three-axes IRM, hysteresis cycles and low-temperature magnetic measurements. The magnetic properties indicate that the sediments are a mixture of hematite, magnetite and pyrrhotite in different proportions depending on the region. Combined with results previously reported for the three main Asian rivers (Pearl, Red and Mekong rivers), the new data indicate that, in general, hematite-rich sediments are delivered to the southern basin of the South China Sea while the northern basin is fed with magnetite and pyrrhotite-rich sediments. In addition to this general picture, some variability is observed at smaller geographic scales. Indeed, the magnetic assemblages are closely related to the geology of the various catchments while clay minerals, previously reported for the same samples, are more representative of the climatic conditions under which the parent rocks have evolved within each catchment. The magnetic fraction, now well characterized in the main river sediments drained into the South China Sea, can be used as a tracer for changes in precipitation on land and in oceanic water mass transport and exchange.

Phylogenetic and enzymatic diversity of deep subseafloor aerobic microorganisms in organics- and methane-rich sediments off Shimokita Peninsula.

PubMed

Kobayashi, Tohru; Koide, Osamu; Mori, Kozue; Shimamura, Shigeru; Matsuura, Takae; Miura, Takeshi; Takaki, Yoshihiro; Morono, Yuki; Nunoura, Takuro; Imachi, Hiroyuki; Inagaki, Fumio; Takai, Ken; Horikoshi, Koki

2008-07-01

"A meta-enzyme approach" is proposed as an ecological enzymatic method to explore the potential functions of microbial communities in extreme environments such as the deep marine subsurface. We evaluated a variety of extra-cellular enzyme activities of sediment slurries and isolates from a deep subseafloor sediment core. Using the new deep-sea drilling vessel "Chikyu", we obtained 365 m of core sediments that contained approximately 2% organic matter and considerable amounts of methane from offshore the Shimokita Peninsula in Japan at a water depth of 1,180 m. In the extra-sediment fraction of the slurry samples, phosphatase, esterase, and catalase activities were detected consistently throughout the core sediments down to the deepest slurry sample from 342.5 m below seafloor (mbsf). Detectable enzyme activities predicted the existence of a sizable population of viable aerobic microorganisms even in deep subseafloor habitats. The subsequent quantitative cultivation using solid media represented remarkably high numbers of aerobic, heterotrophic microbial populations (e.g., maximally 4.4x10(7) cells cm(-3) at 342.5 mbsf). Analysis of 16S rRNA gene sequences revealed that the predominant cultivated microbial components were affiliated with the genera Bacillus, Shewanella, Pseudoalteromonas, Halomonas, Pseudomonas, Paracoccus, Rhodococcus, Microbacterium, and Flexibacteracea. Many of the predominant and scarce isolates produced a variety of extra-cellular enzymes such as proteases, amylases, lipases, chitinases, phosphatases, and deoxyribonucleases. Our results indicate that microbes in the deep subseafloor environment off Shimokita are metabolically active and that the cultivable populations may have a great potential in biotechnology.

Development of Overpressures at Nankai Accretionary Prism, Ocean Drilling Program Sites 1173 and 1174

NASA Astrophysics Data System (ADS)

Gamage, K.; Screaton, E.

2003-12-01

In this study, we used a one-dimensional model of sedimentation, initial prism loading, and fluid flow to examine the development of overpressures at the toe of the Nankai accretionary complex. A permeability-porosity relationship was established for hemipelagic sediments from laboratory measured permeabilities as an input to the model. Vertical permeabilities were measured for 10 core samples from the Ocean Drilling Program (ODP) Leg 190, Sites 1173 and 1174, from the upper and lower Shikoku Basin facies. Both sites were drilled along the Muroto Transect through the dècollement zone or its equivalent. Site 1173 is located 11 km seaward of the deformation front and it represents the undeformed incoming sediments, where as Site 1174 represents sediments within the proto-thrust zone. Although turbidite-rich sediments dominate the Nankai accretionary prism, the dècollement and underthrust sediments are primarily composed of hemipelagic muds. Using the permeability-porosity relationship, our modeling results indicate excess pore pressures that are greater than 30% of lithostatic pressure at the toe of the prism at a convergence rate of 4cm/yr. These values are slightly lower than previously inferred excess pore pressures estimated from porosity data. Additional runs were conducted to simulate a 10-m thick low permeability barrier at the dècollement where vertical fluid flow is restricted. The low permeability barrier required a permeability less than 1 x 10-19 m2 to generate excess pore pressures greater than 50% of lithostatic pressure. Modeling was further extended to test the significance of variable prism loading rates due to uncertainties in the convergence rate and affects of lateral stress above the dècollement.

Mineralogy, Provenance, and Diagenesis of a Potassic Basaltic Sandstone on Mars: CheMin X-Ray Diffraction of the Windjana Sample (Kimberley Area, Gale Crater)

NASA Technical Reports Server (NTRS)

Treiman, Allan H.; Bish, David L.; Vaniman, David T.; Chipera, Steve J.; Blake, David F.; Ming, Doug W.; Morris, Richard V.; Bristow, Thomas F.; Morrison, Shaunna M.; Baker, Michael B.;

Mineralogy, provenance, and diagenesis of a potassic basaltic sandstone on Mars: CheMin X-ray diffraction of the Windjana sample (Kimberley area, Gale Crater)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Treiman, Allan H.; Bish, David L.; Vaniman, David T.

The Windjana drill sample, a sandstone of the Dillinger member (Kimberley formation, Gale Crater, Mars), was analyzed by CheMin X-ray diffraction (XRD) in the MSL Curiosity rover. From Rietveld refinements of its XRD pattern, Windjana contains the following: sanidine (21% weight, ~Or 95); augite (20%); magnetite (12%); pigeonite; olivine; plagioclase; amorphous and smectitic material (~25%); and percent levels of others including ilmenite, fluorapatite, and bassanite. From mass balance on the Alpha Proton X-ray Spectrometer (APXS) chemical analysis, the amorphous material is Fe rich with nearly no other cations—like ferrihydrite. The Windjana sample shows little alteration and was likely cemented bymore » its magnetite and ferrihydrite. From ChemCam Laser-Induced Breakdown Spectrometer (LIBS) chemical analyses, Windjana is representative of the Dillinger and Mount Remarkable members of the Kimberley formation. LIBS data suggest that the Kimberley sediments include at least three chemical components. The most K-rich targets have 5.6% K 2O, ~1.8 times that of Windjana, implying a sediment component with >40% sanidine, e.g., a trachyte. A second component is rich in mafic minerals, with little feldspar (like a shergottite). A third component is richer in plagioclase and in Na 2O, and is likely to be basaltic. The K-rich sediment component is consistent with APXS and ChemCam observations of K-rich rocks elsewhere in Gale Crater. The source of this sediment component was likely volcanic. Finally, the presence of sediment from many igneous sources, in concert with Curiosity's identifications of other igneous materials (e.g., mugearite), implies that the northern rim of Gale Crater exposes a diverse igneous complex, at least as diverse as that found in similar-age terranes on Earth.« less

Mineralogy, provenance, and diagenesis of a potassic basaltic sandstone on Mars: CheMin X‐ray diffraction of the Windjana sample (Kimberley area, Gale Crater)

PubMed Central

Bish, David L.; Vaniman, David T.; Chipera, Steve J.; Blake, David F.; Ming, Doug W.; Morris, Richard V.; Bristow, Thomas F.; Morrison, Shaunna M.; Baker, Michael B.; Rampe, Elizabeth B.; Downs, Robert T.; Filiberto, Justin; Glazner, Allen F.; Gellert, Ralf; Thompson, Lucy M.; Schmidt, Mariek E.; Le Deit, Laetitia; Wiens, Roger C.; McAdam, Amy C.; Achilles, Cherie N.; Edgett, Kenneth S.; Farmer, Jack D.; Fendrich, Kim V.; Grotzinger, John P.; Gupta, Sanjeev; Morookian, John Michael; Newcombe, Megan E.; Rice, Melissa S.; Spray, John G.; Stolper, Edward M.; Sumner, Dawn Y.; Vasavada, Ashwin R.; Yen, Albert S.

2016-01-01

Abstract The Windjana drill sample, a sandstone of the Dillinger member (Kimberley formation, Gale Crater, Mars), was analyzed by CheMin X‐ray diffraction (XRD) in the MSL Curiosity rover. From Rietveld refinements of its XRD pattern, Windjana contains the following: sanidine (21% weight, ~Or95); augite (20%); magnetite (12%); pigeonite; olivine; plagioclase; amorphous and smectitic material (~25%); and percent levels of others including ilmenite, fluorapatite, and bassanite. From mass balance on the Alpha Proton X‐ray Spectrometer (APXS) chemical analysis, the amorphous material is Fe rich with nearly no other cations—like ferrihydrite. The Windjana sample shows little alteration and was likely cemented by its magnetite and ferrihydrite. From ChemCam Laser‐Induced Breakdown Spectrometer (LIBS) chemical analyses, Windjana is representative of the Dillinger and Mount Remarkable members of the Kimberley formation. LIBS data suggest that the Kimberley sediments include at least three chemical components. The most K‐rich targets have 5.6% K2O, ~1.8 times that of Windjana, implying a sediment component with >40% sanidine, e.g., a trachyte. A second component is rich in mafic minerals, with little feldspar (like a shergottite). A third component is richer in plagioclase and in Na2O, and is likely to be basaltic. The K‐rich sediment component is consistent with APXS and ChemCam observations of K‐rich rocks elsewhere in Gale Crater. The source of this sediment component was likely volcanic. The presence of sediment from many igneous sources, in concert with Curiosity's identifications of other igneous materials (e.g., mugearite), implies that the northern rim of Gale Crater exposes a diverse igneous complex, at least as diverse as that found in similar‐age terranes on Earth. PMID:27134806

Mineralogy, provenance, and diagenesis of a potassic basaltic sandstone on Mars: CheMin X-ray diffraction of the Windjana sample (Kimberley area, Gale Crater)

DOE PAGES

Treiman, Allan H.; Bish, David L.; Vaniman, David T.; ...

2015-12-27

The Windjana drill sample, a sandstone of the Dillinger member (Kimberley formation, Gale Crater, Mars), was analyzed by CheMin X-ray diffraction (XRD) in the MSL Curiosity rover. From Rietveld refinements of its XRD pattern, Windjana contains the following: sanidine (21% weight, ~Or 95); augite (20%); magnetite (12%); pigeonite; olivine; plagioclase; amorphous and smectitic material (~25%); and percent levels of others including ilmenite, fluorapatite, and bassanite. From mass balance on the Alpha Proton X-ray Spectrometer (APXS) chemical analysis, the amorphous material is Fe rich with nearly no other cations—like ferrihydrite. The Windjana sample shows little alteration and was likely cemented bymore » its magnetite and ferrihydrite. From ChemCam Laser-Induced Breakdown Spectrometer (LIBS) chemical analyses, Windjana is representative of the Dillinger and Mount Remarkable members of the Kimberley formation. LIBS data suggest that the Kimberley sediments include at least three chemical components. The most K-rich targets have 5.6% K 2O, ~1.8 times that of Windjana, implying a sediment component with >40% sanidine, e.g., a trachyte. A second component is rich in mafic minerals, with little feldspar (like a shergottite). A third component is richer in plagioclase and in Na 2O, and is likely to be basaltic. The K-rich sediment component is consistent with APXS and ChemCam observations of K-rich rocks elsewhere in Gale Crater. The source of this sediment component was likely volcanic. Finally, the presence of sediment from many igneous sources, in concert with Curiosity's identifications of other igneous materials (e.g., mugearite), implies that the northern rim of Gale Crater exposes a diverse igneous complex, at least as diverse as that found in similar-age terranes on Earth.« less

Mercury in Fish, Bed Sediment, and Water from Streams Across the United States, 1998-2005

USGS Publications Warehouse

Scudder, Barbara C.; Chasar, Lia C.; Wentz, Dennis A.; Bauch, Nancy J.; Brigham, Mark E.; Moran, Patrick W.; Krabbenhoft, David P.

2009-01-01

Mercury (Hg) was examined in top-predator fish, bed sediment, and water from streams that spanned regional and national gradients of Hg source strength and other factors thought to influence methylmercury (MeHg) bioaccumulation. Sampled settings include stream basins that were agricultural, urbanized, undeveloped (forested, grassland, shrubland, and wetland land cover), and mined (for gold and Hg). Each site was sampled one time during seasonal low flow. Predator fish were targeted for collection, and composited samples of fish (primarily skin-off fillets) were analyzed for total Hg (THg), as most of the Hg found in fish tissue (95-99 percent) is MeHg. Samples of bed sediment and stream water were analyzed for THg, MeHg, and characteristics thought to affect Hg methylation, such as loss-on-ignition (LOI, a measure of organic matter content) and acid-volatile sulfide in bed sediment, and pH, dissolved organic carbon (DOC), and dissolved sulfate in water. Fish-Hg concentrations at 27 percent of sampled sites exceeded the U.S. Environmental Protection Agency human-health criterion of 0.3 micrograms per gram wet weight. Exceedances were geographically widespread, although the study design targeted specific sites and fish species and sizes, so results do not represent a true nationwide percentage of exceedances. The highest THg concentrations in fish were from blackwater coastal-plain streams draining forests or wetlands in the eastern and southeastern United States, as well as from streams draining gold- or Hg-mined basins in the western United States (1.80 and 1.95 micrograms THg per gram wet weight, respectively). For unmined basins, length-normalized Hg concentrations in largemouth bass were significantly higher in fish from predominantly undeveloped or mixed-land-use basins compared to urban basins. Hg concentrations in largemouth bass from unmined basins were correlated positively with basin percentages of evergreen forest and also woody wetland, especially with increasing proximity of these two land-cover types to the sampling site; this underscores the greater likelihood for Hg bioaccumulation to occur in these types of settings. Increasing concentrations of MeHg in unfiltered stream water, and of bed-sediment MeHg normalized by LOI, and decreasing pH and dissolved sulfate were also important in explaining increasing Hg concentrations in largemouth bass. MeHg concentrations in bed sediment correlated positively with THg, LOI, and acid-volatile sulfide. Concentrations of MeHg in water correlated positively with DOC, ultraviolet absorbance, and THg in water, the percentage of MeHg in bed sediment, and the percentage of wetland in the basin.

Allogenic and Autogenic Signals in the Stratigraphic Record of the Deep-Sea Bengal Fan.

PubMed

Blum, Mike; Rogers, Kimberly; Gleason, James; Najman, Yani; Cruz, Jarrett; Fox, Lyndsey

2018-05-22

The Himalayan-sourced Ganges-Brahmaputra river system and the deep-sea Bengal Fan represent Earth's largest sediment-dispersal system. Here we present detrital zircon U-Pb provenance data from Miocene to middle Pleistocene Bengal Fan turbidites, and evaluate the influence of allogenic forcing vs. autogenic processes on signal propagation from the Himalaya to the deep sea. Our data record the strong tectonic and climatic forcing characteristic of the Himalayan system: after up to 2500 km of river transport, and >1400 km of transport by turbidity currents, the U-Pb record faithfully represents Himalayan sources. Moreover, specific U-Pb populations record Miocene integration of the Brahmaputra drainage with the Asian plate, as well as the rapid Plio-Pleistocene incision through, and exhumation of, the eastern Himalayan syntaxis. The record is, however, biased towards glacial periods when rivers were extended across the shelf in response to climate-forced sea-level fall, and discharged directly to slope canyons. Finally, only part of the record represents a Ganges or Brahmaputra provenance end-member, and most samples represent mixing from the two systems. Mixing or the lack thereof likely represents the fingerprint of autogenic delta-plain avulsions, which result in the two rivers delivering sediment separately to a shelf-margin canyon or merging together as they do today.

Water column and bed-sediment core samples collected from Brownlee Reservoir near Oxbow, Oregon, 2012

USGS Publications Warehouse

Fosness, Ryan L.; Naymik, Jesse; Hopkins, Candice B.; DeWild, John F.

2013-01-01

The U.S. Geological Survey, in cooperation with Idaho Power Company, collected water-column and bed-sediment core samples from eight sites in Brownlee Reservoir near Oxbow, Oregon, during May 5–7, 2012. Water-column and bed-sediment core samples were collected at each of the eight sites and analyzed for total mercury and methylmercury. Additional bed-sediment core samples, collected from three of the eight sites, were analyzed for pesticides and other organic compounds, trace metals, and physical characteristics, such as particle size. Total mercury and methylmercury were detected in each of the water column and bed-sediment core samples. Only 17 of the 417 unique pesticide and organic compounds were detected in bed-sediment core samples. Concentrations of most organic wastewater compounds detected in bed sediment were less than the reporting level. Trace metals detected were greater than the reporting level in all the bed-sediment core samples submitted for analysis. The particle size distribution of bed-sediment core samples was predominantly clay mixed with silt.

Quality-assurance plan for the analysis of fluvial sediment by the U.S. Geological Survey Kentucky Water Science Center Sediment Laboratory

USGS Publications Warehouse

Shreve, Elizabeth A.; Downs, Aimee C.

2005-01-01

This report describes laboratory procedures used by the U.S. Geological Survey Kentucky Water Science Center Sediment Laboratory for the processing and analysis of fluvial-sediment samples for concentration of sand and finer material. The report details the processing of a sediment sample through the laboratory from receiving the sediment sample, through the analytical process, to compiling results of the requested analysis. Procedures for preserving sample integrity, calibrating and maintaining of laboratory and field instruments and equipment, analyzing samples, internal quality assurance and quality control, and validity of the sediment-analysis results also are described. The report includes a list of references cited and a glossary of sediment and quality-assurance terms.

Heterotrophic potential of Atribacteria from deep marine Antarctic sediment

NASA Astrophysics Data System (ADS)

Carr, S. A.; Orcutt, B.; Mandernack, K. W.; Spear, J. R.

2015-12-01

Bacteria belonging to the newly classified candidate phylum "Atribacteria" (formerly referred to as "OP9" and "JS1") are common in anoxic methane-rich sediments. However, the metabolic functions and biogeochemical role of these microorganisms in the subsurface remains unrealized due to the lack of pure culture representatives. This study observed a steady increase of Atribacteria-related sequences with increasing sediment depth throughout the methane-rich zone of the Adélie Basin, Antarctica (according to a 16S rRNA gene survey). To explore the functional potential of Atribacteria in this basin, samples from various depths (14, 25 and 97 meters below seafloor), were subjected to metagenomic sequencing. Additionally, individual cells were separated from frozen, unpreserved sediment for whole genome amplification. The successful isolation and sequencing of a single-amplified Atribacteria genome from these unpreserved sediments demonstrates a future use of single cell techniques with previously collected and frozen sediments. Our resulting single-cell amplified genome, combined with metagenomic interpretations, provides our first insights to the functional potential of Atribacteria in deep subsurface settings. As observed for non-marine Atribacteria, genomic analyses suggest a heterotrophic metabolism, with Atribacteria potentially producing fermentation products such as acetate, ethanol and CO2. These products may in turn support methanogens within the sediment microbial community and explain the frequent occurrence of Atribacteria in anoxic methane-rich sediments.

Grain Size Biasing of 230Th-derived Focusing Factors in the Panama Basin

NASA Astrophysics Data System (ADS)

Loveley, M. R.; Marcantonio, F.; Lyle, M. W.; Ibrahim, R.; Wang, J. K.; Hertzberg, J. E.

2014-12-01

In this study, we attempt to understand how differing grain size classes in Panama Basin sediments may create biasing of 230Th as a constant-flux proxy. Greater amounts of 230Th are contained in fine grained particles, which, if fractionated from coarser grained counterparts may lead to biasing of 230Th-derived mass accumulation rates (MARs) and sediment focusing factors. We examined sediments that span the past 25 kyr from four new sediment cores retrieved from two different localities close to the ridges that bound the Panama Basin. Each locality contained paired sites that were seismically interpreted to have undergone sediment redistribution, i.e., thick focused sites versus thin winnowed sites. Two sediment cores were retrieved from the northern part of the Panama basin, Cocos Ridge, (MV1014-01-"4JC", 5° 44.7'N 85° 45.5' W, 1730 m depth; MV1014-01-"8JC", 6° 14.0'N 86° 2.6' W, 1993 m depth), and two were retrieved from the southern part of the basin, Carnegie Ridge, (MV1014-02-"11JC", 0° 41.6'S 85° 20.0' W, 2452 m depth; MV1014-02-"17JC" 0° 10.8'S 85° 52.0' W, 2846 m depth). Cores 4JC and 11JC lie closer to the ridge tops of the Cocos and Carnegie Ridges, respectively, and have thin sediment drapes, while deeper cores, 8JC (Cocos) and 17JC (Carnegie), have thicker sediment drapes and lie downslope from the ridge top cores. Age-model-derived sand MARs, which likely represent the vertical rain of particles that cannot be transported by bottom currents, are similar at each of the paired sites in Holocene and glacial time slices. However, 230Th-normalized MARs are about 50% lower, on average at each of the paired sites during the same time slices. Both Holocene and glacial samples from "thin" cores (4,11JC) contain, surprisingly, significant amounts (up to 50%) of the 230Th within the coarse grained (>63 μm) fraction which makes up 40-70% of the bulk samples analyzed. On the contrary, Holocene and glacial samples from "thick" cores, (8,17JC), contain the greatest amounts of 230Th (up to 49%) in the finest grain-sized fraction (<4μm), which makes up 26-40% of the bulk samples analyzed. Although, redistribution of sediment has taken place, our analysis indicates that 230Th-derived focusing factors are being overestimated at thick sites and underestimated at thin sites.

Laboratory-Measured and Property-Transfer Modeled Saturated Hydraulic Conductivity of Snake River Plain Aquifer Sediments at the Idaho National Laboratory, Idaho

USGS Publications Warehouse

Perkins, Kim S.

2008-01-01

Sediments are believed to comprise as much as 50 percent of the Snake River Plain aquifer thickness in some locations within the Idaho National Laboratory. However, the hydraulic properties of these deep sediments have not been well characterized and they are not represented explicitly in the current conceptual model of subregional scale ground-water flow. The purpose of this study is to evaluate the nature of the sedimentary material within the aquifer and to test the applicability of a site-specific property-transfer model developed for the sedimentary interbeds of the unsaturated zone. Saturated hydraulic conductivity (Ksat) was measured for 10 core samples from sedimentary interbeds within the Snake River Plain aquifer and also estimated using the property-transfer model. The property-transfer model for predicting Ksat was previously developed using a multiple linear-regression technique with bulk physical-property measurements (bulk density [pbulk], the median particle diameter, and the uniformity coefficient) as the explanatory variables. The model systematically underestimates Ksat,typically by about a factor of 10, which likely is due to higher bulk-density values for the aquifer samples compared to the samples from the unsaturated zone upon which the model was developed. Linear relations between the logarithm of Ksat and pbulk also were explored for comparison.

Simultaneous determination of mercury and organic carbon in sediment and soils using a direct mercury analyzer based on thermal decomposition-atomic absorption spectrophotometry.

PubMed

Chen, Jingjing; Chakravarty, Pragya; Davidson, Gregg R; Wren, Daniel G; Locke, Martin A; Zhou, Ying; Brown, Garry; Cizdziel, James V

2015-04-29

The purpose of this work was to study the feasibility of using a direct mercury analyzer (DMA) to simultaneously determine mercury (Hg) and organic matter content in sediment and soils. Organic carbon was estimated by re-weighing the sample boats post analysis to obtain loss-on-ignition (LOI) data. The DMA-LOI results were statistically similar (p<0.05) to the conventional muffle furnace approach. A regression equation was developed to convert DMA-LOI data to total organic carbon (TOC), which varied between 0.2% and 13.0%. Thus, mercury analyzers based on combustion can provide accurate estimates of organic carbon content in non-calcareous sediment and soils; however, weight gain from moisture (post-analysis), measurement uncertainty, and sample representativeness should all be taken into account. Sediment cores from seasonal wetland and open water areas from six oxbow lakes in the Mississippi River alluvial flood plain were analyzed. Wetland sediments generally had higher levels of Hg than open water areas owing to a greater fraction of fine particles and higher levels of organic matter. Annual loading of Hg in open water areas was estimated at 4.3, 13.4, 19.2, 20.7, 129, and 135 ng cm(-2) yr(-1) for Beasley, Roundaway, Hampton, Washington, Wolf and Sky Lakes, respectively. Generally, the interval with the highest Hg flux was dated to the 1960s and 1970s. Copyright © 2015 Elsevier B.V. All rights reserved.

Surface-water-quality assessment of the upper Illinois River Basin in Illinois, Indiana, and Wisconsin; fixed-station network and selected water-quality data for April 1987-September 1990

USGS Publications Warehouse

Sullivan, Daniel J.; Blanchard, Stephen F.

1994-01-01

This report describes and presents the sampling design, methods, quality assurance methods and results, and information on how to obtain data collected at eight fixed stations in the upper Illinois River Basin as part of the pilot phase of the National Water-Quality Assessment program. Data were collected monthly from April 1987-August l990; these data were supplemented with data collected during special events, including high and low flows. Each fixed station represents a cross section at which the transport of selected dissolved and suspended materials can be computed. Samples collected monthly and during special events were analyzed for concentrations of major ions, nutrients, trace elements, organic carbon, chlorophyll-a, suspended sediment, and other constituents. Field measurements of water temperature, pH, dissolved oxygen, specific conductance, and indicator bacteria also were made at each site. Samples of suspended sediment were analyzed for concentrations of major ions and trace elements. In addition, samples were analyzed seasonally for concentrations of antimony, bromide, molybdenum, and the radionuclides gross alpha and gross beta.

GRANITE PEAK ROADLESS AREA, CALIFORNIA.

USGS Publications Warehouse

Huber, Donald F.; Thurber, Horace K.

1984-01-01

The Granite Peak Roadless Area occupies an area of about 5 sq mi in the southern part of the Trinity Alps of the Klamath Mountains, about 12 mi north-northeast of Weaverville, California. Rock and stream-sediment samples were analyzed. All streams draining the roadless area were sampled and representative samples of the rock types in the area were collected. Background values were established for each element and anomalous values were examined within their geologic settings and evaluated for their significance. On the basis of mineral surveys there seems little likelihood for the occurrence of mineral or energy resources.

Heavy metal speciation, leaching and toxicity status of a tropical rain-fed river Damodar, India.

PubMed

Pal, Divya; Maiti, Subodh Kumar

2018-03-26

Speciations of metals were assessed in a tropical rain-fed river, flowing through the highly economically important part of the India. The pattern of distribution of heavy metals (Cd, Co, Cr, Cu, Mn, Ni, Pb and Zn) were evaluated in water and sediment along with mineralogical characterization, changes with different water quality parameters and their respective health hazard to the local population along the Damodar River basin during pre-monsoon and post-monsoon seasons. The outcome of the speciation analysis using MINTEQ indicated that free metal ions, carbonate, chloride and sulfate ions were predominantly in anionic inorganic fractions, while in cationic inorganic fractions metal loads were negligible. Metals loads were higher in sediment phase than in the aqueous phase. The estimated values of I geo in river sediment during both the seasons showed that most of the metals were found in the I geo class 0-1 which represents unpolluted to moderately polluted sediment status. The result of partition coefficient indicated the strong retention capability of Cr, Pb, Co and Mn, while Cd, Zn, Cu and Ni have resilient mobility capacity. The mineralogical analysis of sediment samples indicated that in Damodar River, quartz, kaolinite and calcite minerals were dominantly present. The hazard index values of Cd, Co and Cr were > 1 in river water, which suggested potential health risk for the children. A combination of pragmatic, computational and statistical relationship between ionic species and fractions of metals represented a strong persuasion for identifying the alikeness among the different sites of the river.

Analysis of mesoscopic attenuation in gas-hydrate bearing sediments

NASA Astrophysics Data System (ADS)

Rubino, J. G.; Ravazzoli, C. L.; Santos, J. E.

2007-05-01

Several authors have shown that seismic wave attenuation combined with seismic velocities constitute a useful geophysical tool to infer the presence and amounts of gas hydrates lying in the pore space of the sediments. However, it is still not fully understood the loss mechanism associated to the presence of the hydrates, and most of the works dealing with this problem focuse on macroscopic fluid flow, friction between hydrates and sediment matrix and squirt flow. It is well known that an important cause of the attenuation levels observed in seismic data from some sedimentary regions is the mesoscopic loss mechanism, caused by heterogeneities in the rock and fluid properties greater than the pore size but much smaller than the wavelengths. In order to analyze this effect in heterogeneous gas-hydrate bearing sediments, we developed a finite-element procedure to obtain the effective complex modulus of an heterogeneous porous material containing gas hydrates in its pore space using compressibility tests at different oscillatory frequencies in the seismic range. The complex modulus were obtained by solving Biot's equations of motion in the space-frequency domain with appropriate boundary conditions representing a gedanken laboratory experiment measuring the complex volume change of a representative sample of heterogeneous bulk material. This complex modulus in turn allowed us to obtain the corresponding effective phase velocity and quality factor for each frequency and spatial gas hydrate distribution. Physical parameters taken from the Mallik 5L-38 Gas Hydrate Research well (Mackenzie Delta, Canada) were used to analyze the mesoscopic effects in realistic hydrated sediments.

Calcium Isotopic Compositions of Forearc Sediments from DSDP Site 144

NASA Astrophysics Data System (ADS)

Zhang, Z.; Zhu, H.; Nan, X.; Li, X.; Huang, F.

2016-12-01

It is important to investigate calcium isotopic compositions of reservoirs of the Earth for better application of Ca isotopes into studies of a variety of geochemical problems. Because Ca isotopic compositions for igneous rocks and carbonates are increasingly reported, this maybe bring new requirements on carefully understanding the isotopic compositions of subducted marine sediments. Marine sediments mainly contains carbonates and clays, controlling the compositions of slab-derived materials which are added to the mantle wedge. Obviously, it could have different elemental and calcium isotopic compositions with marine carbonate. Thus, it could also put biases on calcium isotopic signatures of basalts resulted from recycling oceanic carbonate into the mantle. Here, we report calcium isotopic compositions of 17 sediment samples from Deep Sea Drilling Project (DSDP) site 144 (09°27.23' N, 54°20.52' W) which is located about 400 km north of Surinam on the northern flank of the Demerara Rise with a water depth of 2957 meters. These samples have CaO contents ranging from 14.56 wt.% to 41.46 wt.% with an average of 29.61 ± 18.21 (2SD), δ44/40Ca ranges from 0.19 to 0.58 (relative to SRM915a) with an average of 0.40 ± 0.22 (2SD). These carbonate-rich sediments can be used to represent an endmember with high CaO content and low δ44/40Ca, which could modify chemical composition of the upper mantle and subduction zone lavas if they are recycled to the convective mantle during subduction. The positive linear correlation between CaO and δ44/40Ca in the sediments cannot be explained by a simple mixing between marine carbonate and clay. Instead, δ44/40Ca of these samples roughly increase from the Upper Cretaceous to the Early Oligocene, which might reflect the evolution of calcium isotopic compositions of seawater through time.

Levels of metals and semimetals in sedimentary cores in Bertioga Channel, Brazil

NASA Astrophysics Data System (ADS)

Sartoretto, J. R.; Salaroli, A.; Figueira, R. C.

2013-05-01

The Baixada Santista is one of the most exploited and populated regions of São Paulo state. During the last decades, due to intense industrialization the Baixada Santista has passed through a strong process of environmental degradation. Metals in sediments are persistent, present toxicity in varied concentrations and may be deposited reaching biota habitats. In this context, high concentrations of metals represent environmental concern to costal management. Bertioga Channel is part of this complex system and is known mainly by a wide adjacent mangrove area. The channel is 25 km long, connecting the upstream region of Santos estuary to the adjacent ocean through an inlet located at the city of Bertioga. Urban development generates the concern of potential waste influx from surrounding streams, generating deposits and contaminating surface sediments along the channel, which may lead to adjacent coastal issues. The objective of this study was to characterize the concentration of the following metals at Bertioga Channel sediments: Al, As, Cd, Cr, Cu, Fe, Hg, Mn, Ni, Pb, Sc, V and Zn. Five sediment cores were sampled along the channel and analyzed. Determination of metals concentration was based on methods SW 846 US EPA 3050B and EPA 7471. High As concentrations were observed at all cores, with considerable concentration similarity between the first and second sampling points. Analytical results showed that cores Bertioga 4 and Bertioga 5 have accumulated high quantity of metals and semimetals, mainly As, Cd and Cr. Normalization of concentration values showed low contamination at the cores. Nevertheless, As and Hg values indicated moderate to significant contamination at a few sampling points. Despite of the low probability of contamination demonstrated by the normalized values, increasing at the sediment surface of Enrichment Factor (ER), Pollution Load Index (PLI) and Sediment Pollution Index (SPI) parameters were observed. Results indicate that industrialization process and environmental degradation at the region are acting for the last decades.

Radon emanation of heterogeneous basin deposits in Kathmandu Valley, Nepal

NASA Astrophysics Data System (ADS)

Girault, Frédéric; Gajurel, Ananta Prasad; Perrier, Frédéric; Upreti, Bishal Nath; Richon, Patrick

2011-01-01

Effective radium-226 concentration ( EC Ra) has been measured in soil samples from seven horizontal and vertical profiles of terrace scarps in the northern part of Kathmandu Valley, Nepal. The samples belong to the Thimi, Gokarna, and Tokha Formations, dated from 50 to 14 ky BP, and represent a diverse fluvio-deltaic sedimentary facies mainly consisting of gravelly to coarse sands, black, orange and brown clays. EC Ra was measured in the laboratory by radon-222 emanation. The samples ( n = 177) are placed in air-tight glass containers, from which, after an accumulation time varying from 3 to 18 days, the concentration of radon-222, radioactive decay product of radium-226 and radioactive gas with a half-life of 3.8 days, is measured using scintillation flasks. The EC Ra values from the seven different profiles of the terrace deposits vary from 0.4 to 43 Bq kg -1, with profile averages ranging from 12 ± 1 to 27 ± 2 Bq kg -1. The values have a remarkable consistency along a particular horizon of sediment layers, clearly demonstrating that these values can be used for long distance correlations of the sediment horizons. Widely separated sediment profiles, representing similar stratigraphic positions, exhibit consistent EC Ra values in corresponding stratigraphic sediment layers. EC Ra measurements therefore appear particularly useful for lithologic and stratigraphic discriminations. For comparison, EC Ra values of soils from different localities having various sources of origin were also obtained: 9.2 ± 0.4 Bq kg -1 in soils of Syabru-Bensi (Central Nepal), 23 ± 1 Bq kg -1 in red residual soils of the Bhattar-Trisuli Bazar terrace (North of Kathmandu), 17.1 ± 0.3 Bq kg -1 in red residual soils of terrace of Kalikasthan (North of Trisuli Bazar) and 10 ± 1 Bq kg -1 in red residual soils of a site near Nagarkot (East of Kathmandu). The knowledge of EC Ra values for these various soils is important for modelling radon exhalation at the ground surface, in particular in the vicinity of active faults. Importantly, the study also reveals that, above numerous sediments of Kathmandu Valley, radon concentration in dwellings can potentially exceed the level of 300 Bq m -3 for residential areas; a fact that should be seriously taken into account by the governmental and non-governmental agencies as well as building authorities.

Redox processes as revealed by voltammetry in the surface sediments of the Gotland Basin, Baltic Sea

NASA Astrophysics Data System (ADS)

Yücel, Mustafa; Dale, Andy; Sommer, Stefan; Pfannkuche, Olaf

2014-05-01

Sulfur cycling in marine sediments undergoes dramatic changes with changing redox conditions of the overlying waters. The upper sediments of the anoxic Gotland Basin, central Baltic Sea represent a dynamic redox environment with extensive mats of sulfide oxidizing bacteria covering the seafloor beneath the chemocline. In order to investigate sulfur redox cycling at the sediment-water interface, sediment cores were sampled over a transect covering 65 - 174 m water depth in August-September 2013. High resolution (0.25 mm minimum) vertical microprofiles of electroactive redox species including dissolved sulfide and iron were obtained with solid state Au-Hg voltammetric microelectrodes. This approach enabled a fine-scale comparison of porewater profiles across the basin. The steepest sulfide gradients (i.e. the highest sulfide consumption) occurred within the upper 10 mm in sediments covered by surficial mats (2.10 to 3.08 mmol m-2 day-1). In sediments under permanently anoxic waters (>140m), voltammetric signals for Fe(II) and aqueous FeS were detected below a subsurface maximum in dissolved sulfide, indicating a Fe flux originating from older, deeper sedimentary layers. Our results point to a unique sulfur cycling in the Gotland basin seafloor where sulfide accumulation is moderated by sulfide oxidation at the sediment surface and by FeS precipitation in deeper sediment layers. These processes may play an important role in minimizing benthic sulfide fluxes to bottom waters around the major basins of the Baltic Sea.

Nitrous Oxide Production and Fluxes from Coastal Sediments under Varying Environmental Conditions

NASA Astrophysics Data System (ADS)

Ziebis, W.; Wankel, S. D.; de Beer, D.; Dentinger, J.; Buchwald, C.; Charoenpong, C.

2014-12-01

Although coastal zones represent important contributors to the increasing levels of atmospheric nitrous oxide (N2O), it is still unclear which role benthic processes play and whether marine sediments represent sinks or sources for N2O, since interactions among closely associated microbial groups lead to a high degree of variability. In addition, coastal areas are extremely dynamic regions, often exposed to increased nutrient loading and conditions of depleted oxygen. We investigated benthic N2O fluxes and how environmental conditions affect N2O production in different sediments at 2 different geographical locations (German Wadden Sea, a California coastal lagoon). At each location, a total of 32 sediment cores were taken in areas that differed in sediment type, organic content and pore-water nutrient concentrations, as well as in bioturbation activity. Parallel cores were incubated under in-situ conditions, low oxygen and increased nitrate levels for 10 days. Zones of N2O production and consumption were identified in intact cores by N2O microprofiles at the beginning and end of the experiments. In a collaborative effort to determine the dominant sources of N2O, samples were taken throughout the course of the experiments for the determination of the isotopic composition of N2O (as well as nitrate, nitrite and ammonium). Our results indicate that both, nitrate addition and low oxygen conditions in the overlying water, caused an increase of subsurface N2O production in most sediments, with a high variability between different sediment types. N2O production in the sediments was accompanied by N2O consumption, reducing the fluxes to the water column. In general, organic rich sediments showed the strongest response to environmental changes with increased production and efflux of N2O into the overlying water. Bioturbation activity added to the complexity of N2O dynamics by an increase in nitrification-denitrification processes, as well as enhanced pore-water transport. The results will be used in a metabolic modeling approach that will allow numerical simulation and prediction of sedimentary N2O dynamics.

Understanding sediment sources in a peri-urban Mediterranean catchment using geochemical tracers

NASA Astrophysics Data System (ADS)

Ferreira, Carla; Walsh, Rory; Kikuchi, Ryunosuke; Blake, Will

2016-04-01

One of the main physical environmental impacts of urbanization is an increase in suspended sediment concentrations and loads, particularly in the constructional phase. Impacts in peri-urban catchments characterized by a mosaic of urban and non-urban landscape elements with varying roles in acting as sources and sinks of overland flow and slope wash have received little attention, particularly in Mediterranean environments. The present study uses a sediment 'fingerprinting' approach to determine the main sediment sources in the peri-urban Ribeira dos Covões catchment (6.2km2) in Portugal and how they change during storm events following contrasting antecedent weather. The catchment, rural until 1972, underwent discontinuous urbanization in 1973-1993, followed by an urban consolidation phase. Currently, its land-use is a complex mosaic of woodland (56%), urban (40%) and agricultural (4%) land parcels. Distinct urban patterns include some well-defined urban residential centres, but also areas of discontinuous urban sprawl. Since 2010, a major road was built and an enterprise park has been under construction, covering 1% and 5% of the catchment, respectively. The catchment has a Mediterranean climate. The geology comprises sandstone (56%), limestone (41%) and alluvial deposits (3%). Soils are generally deep (>3.0m), but shallow (<0.4m) on steeper limestone terrain. The catchment has an average slope of 9° , but includes steep slopes of up to 46° . The sediment fingerprinting methodology involved characterizing the chemical properties of sediments from individual upstream sub-catchments and comparing these to the properties of downstream transported fluvial material. Three fine bed-sediment sampling surveys were carried out after (i) a long dry period (21/09/2012), (ii) a winter storm of relatively high rainfall intensity (23.2mm day-1) (19/02/2015), and (iii) after several storms in Spring (22/04/2015). All samples were oven-dried (at 38° C) and sieved to obtain different particle size fractions (0.125-2.000mm, 0.063-0.125mm and <0.063mm). Seventeen stream sites were sampled plus a sample of sediment from a road surface immediately it entered the stream network. The elemental composition (40 elements) of each size fraction was assessed using a Niton X-ray fluorescence elemental analyser. Results show that rock type has a profound influence on the geochemical properties of bed-sediments. Catchment outlet sediment collected after the summer and a storm of high rainfall intensity following dry weather displayed geochemical properties closer to those of sediment from sandstone sub-catchments, and in particularly sediment from the enterprise park under construction. After the storm that followed very wet weather, however, limestone areas became of much greater significance as sediment sources, probably because of the high soil saturation. At limestone stream sites receiving runoff from the newly constructed road, fine bed-sediment geochemistry was found to be similar to that of road sediment, indicating a high contribution of this source. These results are supported by spatio-temporal differences in streamflow and suspended sediment concentrations at instrumented monitoring stations. It is concluded that this methodology represents a potentially useful tool to enable river managers to detect and assess sediment sources in urbanized and partly urbanized catchments, and to supporting them in designing and implementing effective land-use mosaics and site-specific measures to mitigate erosion.

Assessment of metal contamination in a small mining- and smelting-affected watershed: high resolution monitoring coupled with spatial analysis by GIS.

PubMed

Coynel, Alexandra; Blanc, Gérard; Marache, Antoine; Schäfer, Jörg; Dabrin, Aymeric; Maneux, Eric; Bossy, Cécile; Masson, Matthieu; Lavaux, Gilbert

2009-05-01

The Riou Mort River watershed (SW France), representative of a heavily polluted, small, heterogeneous watershed, represents a major source for the polymetallic pollution of the Lot-Garonne-Gironde fluvial-estuarine system due to former mining and ore-treatment activities. In order to assess spatial distribution of the metal/metalloid contamination in the watershed, a high resolution hydrological and geochemical monitoring were performed during one year at four permanent observation stations. Additionally, thirty-five stream sediment samples were collected at representative key sites and analyzed for metal/metalloid (Cd, Zn, Cu, Pb, As, Sb, Mo, V, Cr, Co, Ni, Th, U and Hg) concentrations. The particulate concentrations in water and stream sediments show high spatial differences for most of the studied elements suggesting strong anthropogenic and/or lithogenic influences; for stream sediments, the sequence of the highest variability, ranging from 100% to 300%, is the following: Mo < Cu < Hg < As < Sb < Cd < Zn < Pb. Multidimensional statistical analyses combined with metal/metalloid maps generated by GIS tool were used to establish relationships between elements, to identify metal/metalloid sources and localize geochemical anomalies attributed to local geochemical background, urban and industrial activities. Finally, this study presents an approach to assess anthropogenic trace metal inputs within this watershed by combining lithology-dependent geochemical background values, metal/metalloid concentrations in stream sediments and mass balances of element fluxes at four key sites. The strongest anthropogenic contributions to particulate element fluxes are 90-95% for Cd, Zn and Hg in downstream sub-catchments. The localisation of anthropogenic metal/metalloid sources in restricted areas offers a great opportunity to further significantly reduce metal emissions and restore the Lot-Garonne-Gironde fluvial-estuarine ecosystem.

Core descriptions, core photographs, physical property logs and surface textural data of sediment cores recovered from the continental shelf of the Monterey Bay National Marine Sanctuary during the research cruises M-1-95-MB, P-2-95-MB, and P-1-97-MB

USGS Publications Warehouse

Orzech, Kevin M.; Dahl, Wendy E.; Edwards, Brian D.

2001-01-01

In response to the 1992 creation of the Monterey Bay National Marine Sanctuary (MBNMS), the United States Geological Survey (USGS) initiated a multiyear investigation of the Sanctuary continental margin. As part of the investigative effort, this report summarizes the shipboard procedures, subsequent laboratory analyses, and data results from three seafloor sampling cruises conducted on the continental shelf between Monterey peninsula, CA and San Francisco, CA. The cruises were conducted in 1995 aboard the NOAA Ship McArthur (M-1-95-MB) and in 1995 and 1997 aboard the R/V Point Sur (P-2-95-MB and P-1-97-MB). Scientists and representatives from the Environmental Protection Agency (EPA), the National Oceanic and Atmospheric Administration (NOAA), the California Department of Fish and Game (CDFG), the University of California Santa Cruz (UCSC), and the San Jose State University Moss Landing Marine Laboratory (SJSU-MLML) supported the research effort. In this report we present sediment descriptions, sediment textural data, physical property logs, station metadata, and photographs of subcores from a total of three hundred and eighty four sample stations. At these sites either a box corer, MultiCore™r, grab sampler or a combination of these sampling devices were used to collect the sea floor sediments. The report is presented in an interactive web-based format with each mapped core station linked to the corresponding description and photo, and to a spreadsheet of surface texture and other sampling data.

Estimating the biological value of soft-bottom sediments with sediment profile imaging and grab sampling

NASA Astrophysics Data System (ADS)

Van Hoey, Gert; Birchenough, Silvana N. R.; Hostens, Kris

2014-02-01

Biological value estimation is based on a set of assessment questions and several thresholds to delineate areas of ecological importance (e.g. biodiversity). An existing framework, that was specifically designed to assess the ecosystem biodiversity, was expanded by adding new questions on the productivity, functionality and biogeochemical status of benthic habitats. The additional ecological and sedimentological information was collected by using sediment profile imagery (SPI) and grab sampling. Additionally, information on the performance and comparability of both techniques is provided in this study. The research idea was tested at a site near the harbor of Zeebrugge, an area under consideration as a new disposal site for dredged material from the harbor entrance. The sedimentology of the area can be adequately described based on the information from both SPI and Van Veen grab samples, but only the SPI revealed structural information on the physical habitat (layering, a-RPD). The latter information represented the current status of the benthic habitat, which was confirmed by the Van Veen grab samples. All information was summarized through the biological valuation framework, and provided clear evidence of the differences in biological value for the different sediment types within the area. We concluded that the installation of a new dredged material disposal site in this area was not in conflict with the benthic ecology. This area has a low biological value and the benthic system is adapted to changing conditions, which was signaled by the dominance of mobile, short living and opportunistic species. This study showed that suitable sedimentological and ecological information can be gathered by these traditional and complementary techniques, to estimate the biological value of an area in the light of marine spatial planning and environmental impact assessments.

A geochemical atlas of North Carolina, USA

USGS Publications Warehouse

Reid, J.C.

1993-01-01

A geochemical atlas of North Carolina, U.S.A., was prepared using National Uranium Resource Evaluation (NURE) stream-sediment data. Before termination of the NURE program, sampling of nearly the entire state (48,666 square miles of land area) was completed and geochemical analyses were obtained. The NURE data are applicable to mineral exploration, agriculture, waste disposal siting issues, health, and environmental studies. Applications in state government include resource surveys to assist mineral exploration by identifying geochemical anomalies and areas of mineralization. Agriculture seeks to identify areas with favorable (or unfavorable) conditions for plant growth, disease, and crop productivity. Trace elements such as cobalt, copper, chromium, iron, manganese, zinc, and molybdenum must be present within narrow ranges in soils for optimum growth and productivity. Trace elements as a contributing factor to disease are of concern to health professionals. Industry can use pH and conductivity data for water samples to site facilities which require specific water quality. The North Carolina NURE database consists of stream-sediment samples, groundwater samples, and stream-water analyses. The statewide database consists of 6,744 stream-sediment sites, 5,778 groundwater sample sites, and 295 stream-water sites. Neutron activation analyses were provided for U, Br, Cl, F, Mn, Na, Al, V, Dy in groundwater and stream water, and for U, Th, Hf, Ce, Fe, Mn, Na, Sc, Ti, V, Al, Dy, Eu, La, Sm, Yb, and Lu in stream sediments. Supplemental analyses by other techniques were reported on U (extractable), Ag, As, Ba, Be, Ca, Co, Cr, Cu, K, Li, Mg, Mo, Nb, Ni, P, Pb, Se, Sn, Sr, W, Y, and Zn for 4,619 stream-sediment samples. A small subset of 334 stream samples was analyzed for gold. The goal of the atlas was to make available the statewide NURE data with minimal interpretation to enable prospective users to modify and manipulate the data for their end use. The atlas provides only very general indication of geochemical distribution patterns and should not be used for site specific studies. The atlas maps for each element were computer-generated at the state's geographic information system (Center for Geographic Information and Analysis [CGIA]). The Division of Statistics and Information Services provided input files. The maps in the atlas are point maps. Each sample is represented by a symbol generally corresponding to a quartile class. Other reports will transmit sample and analytical data for state regions. Data are tentatively planned to be available on disks in spreadsheet format for personal computers. During the second phase of this project, stream-sediment samples are being assigned to state geologic map unit names using a GIS system to determine background and anomaly values. Subsequent publications will make this geochemical data and accompanying interpretations available to a wide spectrum of interdisciplinary users. ?? 1993.

Benthic harpacticoid copepods of Jiaozhou Bay, Qingdao

NASA Astrophysics Data System (ADS)

Ma, Lin; Li, Xinzheng

2017-09-01

The species richness of benthic harpacticoid copepod fauna in Jiaozhou Bay, Qingdao, on the southern coast of Shandong Peninsula, has not been comprehensively studied. We present a preliminary inventory of species for this region based on material found in nine sediment samples collected from 2011 to 2012. Our list includes 15 species belonging to 15 genera in 9 families, the most speciose family was the Miraciidae Dana, 1846 (seven species); all other families were represented by single species only. Sediment characteristics and depth are determined to be important environmental determinants of harpacticoid distribution in this region. We briefly detail the known distributions of species and provide a key to facilitate their identification. Both harpacticoid species richness and the species/genus ratio in Jiaozhou Bay are lower than in Bohai Gulf and Gwangyang Bay. The poor knowledge of the distribution of benthic harpacticoids, in addition to low sampling effort in Jiaozhou Bay, likely contribute to low species richness.

Electron spin resonance as a high sensitivity technique for environmental magnetism: determination of contamination in carbonate sediments

NASA Astrophysics Data System (ADS)

Crook, Nigel P.; Hoon, Stephen R.; Taylor, Kevin G.; Perry, Chris T.

2002-05-01

This study investigates the application of high sensitivity electron spin resonance (ESR) to environmental magnetism in conjunction with the more conventional techniques of magnetic susceptibility, vibrating sample magnetometry (VSM) and chemical compositional analysis. Using these techniques we have studied carbonate sediment samples from Discovery Bay, Jamaica, which has been impacted to varying degrees by a bauxite loading facility. The carbonate sediment samples contain magnetic minerals ranging from moderate to low concentrations. The ESR spectra for all sites essentially contain three components. First, a six-line spectra centred around g = 2 resulting from Mn2+ ions within a carbonate matrix; second a g = 4.3 signal from isolated Fe3+ ions incorporated as impurities within minerals such as gibbsite, kaolinite or quartz; third a ferrimagnetic resonance with a maxima at 230 mT resulting from the ferrimagnetic minerals present within the bauxite contamination. Depending upon the location of the sites within the embayment these signals vary in their relative amplitude in a systematic manner related to the degree of bauxite input. Analysis of the ESR spectral components reveals linear relationships between the amplitude of the Mn2+ and ferrimagnetic signals and total Mn and Fe concentrations. To assist in determining the origin of the ESR signals coral and bauxite reference samples were employed. Coral representative of the matrix of the sediment was taken remote from the bauxite loading facility whilst pure bauxite was collected from nearby mining facilities. We find ESR to be a very sensitive technique particularly appropriate to magnetic analysis of ferri- and para-magnetic components within environmental samples otherwise dominated by diamagnetic (carbonate) minerals. When employing typical sample masses of 200 mg the practical detection limit of ESR to ferri- and para-magnetic minerals within a diamagnetic carbonate matrix is of the order of 1 ppm and 1 ppb respectively, approximately 102 and 105 times the sensitivity achievable employing the VSM in our laboratory.

Central Colorado Assessment Project (CCAP)-Geochemical data for rock, sediment, soil, and concentrate sample media

USGS Publications Warehouse

Granitto, Matthew; DeWitt, Ed H.; Klein, Terry L.

2010-01-01

This database was initiated, designed, and populated to collect and integrate geochemical data from central Colorado in order to facilitate geologic mapping, petrologic studies, mineral resource assessment, definition of geochemical baseline values and statistics, environmental impact assessment, and medical geology. The Microsoft Access database serves as a geochemical data warehouse in support of the Central Colorado Assessment Project (CCAP) and contains data tables describing historical and new quantitative and qualitative geochemical analyses determined by 70 analytical laboratory and field methods for 47,478 rock, sediment, soil, and heavy-mineral concentrate samples. Most samples were collected by U.S. Geological Survey (USGS) personnel and analyzed either in the analytical laboratories of the USGS or by contract with commercial analytical laboratories. These data represent analyses of samples collected as part of various USGS programs and projects. In addition, geochemical data from 7,470 sediment and soil samples collected and analyzed under the Atomic Energy Commission National Uranium Resource Evaluation (NURE) Hydrogeochemical and Stream Sediment Reconnaissance (HSSR) program (henceforth called NURE) have been included in this database. In addition to data from 2,377 samples collected and analyzed under CCAP, this dataset includes archived geochemical data originally entered into the in-house Rock Analysis Storage System (RASS) database (used by the USGS from the mid-1960s through the late 1980s) and the in-house PLUTO database (used by the USGS from the mid-1970s through the mid-1990s). All of these data are maintained in the Oracle-based National Geochemical Database (NGDB). Retrievals from the NGDB and from the NURE database were used to generate most of this dataset. In addition, USGS data that have been excluded previously from the NGDB because the data predate earliest USGS geochemical databases, or were once excluded for programmatic reasons, have been included in the CCAP Geochemical Database and are planned to be added to the NGDB.

Occurrence of Selected Nutrients, Trace Elements, and Organic Compounds in Streambed Sediment in the Lower Chena River Watershed near Fairbanks, Alaska, 2002-03

USGS Publications Warehouse

Kennedy, Ben W.; Hall, Cassidee C.

2009-01-01

In 2002-03, the U.S. Geological Survey collected samples of streambed sediment at 18 sites in the lower Chena River watershed for analysis of selected nutrients, traces elements, and organic compounds. The purpose of the project was to provide Federal, State, and local agencies as well as neighborhood committees, with information for consideration in plans to improve environmental conditions in the watershed. The exploratory sampling program included analysis of streambed sediment from the Chena River and Chena Slough, a tributary to the Chena River. Results were compared to streambed-sediment guidelines for the protection of aquatic life and to 2001-02 sediment data from Noyes Slough, a side channel of the lower Chena River. The median total phosphorus concentration in Chena Slough sediment samples, 680 milligrams per kilogram (mg/kg), was two orders of magnitude greater than median total phosphorus concentration in Chena River sediment samples of 5.2 mg/kg. Median concentrations of chloride and sulfate also were greater in Chena Slough samples. Low concentrations of nitrate were detected in most of the Chena Slough samples; nitrate concentrations were below method reporting limits or not detected in Chena River sediment samples. Streambed-sediment samples were analyzed for 24 trace elements. Arsenic, nickel, and zinc were the only trace elements detected in concentrations that exceeded probable-effect levels for the protection of aquatic life. Concentrations of arsenic in Chena Slough samples ranged from 11 to 70 mg/kg and concentrations in most of the samples exceeded the probable-effect guideline for arsenic of 17 mg/kg. Arsenic concentrations in samples from the Chena River ranged from 9 to 12 mg/kg. The background level for arsenic in the lower Chena River watershed is naturally elevated because of significant concentrations of arsenic in local bedrock and ground water. Sources of elevated concentrations of zinc in one sample, and of nickel in two samples, are unknown. With the exception of elevated arsenic levels in samples from Chena Slough, the occurrence and concentration of trace elements in the streambed sediments of Chena Slough and Chena River were similar to those in Noyes Slough sediment. Sediment samples were analyzed for 78 semivolatile organic compounds and 32 organochlorine pesticides and polychlorinated biphenyls (PCBs). Low concentrations of dimethylnaphthalene and p-Cresol were detected in most Chena Slough and Chena River sediment samples. The number of semivolatile organic compounds detected ranged from 5 to 21 in most Chena Slough sediment samples. In contrast, three or fewer semivolatile organic compounds were detected in Chena River sediment samples, most likely because chemical-matrix interference resulted in elevated reporting limits for organochlorine compounds in the Chena River samples. Low concentrations of fluoranthene, pyrene, and phenanthrene were detected in Chena Slough sediment. Relatively low concentrations of DDT or its degradation products, DDD and DDE, were detected in all Chena Slough samples. Concentrations of total DDT (DDT+DDD+DDE) in two Chena Slough sediment samples exceeded the effectsrange median aquatic-life criteria of 46.1 micrograms per kilogram (ug/kg). DDT concentrations in Chena River streambed-sediment samples were less than 20 ug/kg. Low concentrations of PCB were detected in two Chena Slough streambed-sediment samples. None of the concentrations of the polychlorinated biphenyls or semivolatile organic compounds for which the samples were analyzed exceeded available guidelines for the protection of aquatic life. With the exception of elevated total DDT in two Chena Slough samples, the occurrence and concentration of organochlorine compounds in Chena Slough and Chena River sediment were similar to those in samples collected from Noyes Slough in 2001-02.

Planktonic foraminifera-derived environmental DNA extracted from abyssal sediments preserves patterns of plankton macroecology

NASA Astrophysics Data System (ADS)

Morard, Raphaël; Lejzerowicz, Franck; Darling, Kate F.; Lecroq-Bennet, Béatrice; Winther Pedersen, Mikkel; Orlando, Ludovic; Pawlowski, Jan; Mulitza, Stefan; de Vargas, Colomban; Kucera, Michal

2017-06-01

Deep-sea sediments constitute a unique archive of ocean change, fueled by a permanent rain of mineral and organic remains from the surface ocean. Until now, paleo-ecological analyses of this archive have been mostly based on information from taxa leaving fossils. In theory, environmental DNA (eDNA) in the sediment has the potential to provide information on non-fossilized taxa, allowing more comprehensive interpretations of the fossil record. Yet, the process controlling the transport and deposition of eDNA onto the sediment and the extent to which it preserves the features of past oceanic biota remains unknown. Planktonic foraminifera are the ideal taxa to allow an assessment of the eDNA signal modification during deposition because their fossils are well preserved in the sediment and their morphological taxonomy is documented by DNA barcodes. Specifically, we re-analyze foraminiferal-specific metabarcodes from 31 deep-sea sediment samples, which were shown to contain a small fraction of sequences from planktonic foraminifera. We confirm that the largest portion of the metabarcode originates from benthic bottom-dwelling foraminifera, representing the in situ community, but a small portion (< 10 %) of the metabarcodes can be unambiguously assigned to planktonic taxa. These organisms live exclusively in the surface ocean and the recovered barcodes thus represent an allochthonous component deposited with the rain of organic remains from the surface ocean. We take advantage of the planktonic foraminifera portion of the metabarcodes to establish to what extent the structure of the surface ocean biota is preserved in sedimentary eDNA. We show that planktonic foraminifera DNA is preserved in a range of marine sediment types, the composition of the recovered eDNA metabarcode is replicable and that both the similarity structure and the diversity pattern are preserved. Our results suggest that sedimentary eDNA could preserve the ecological structure of the entire pelagic community, including non-fossilized taxa, thus opening new avenues for paleoceanographic and paleoecological studies.

Microbial Sulfate Reduction Potential in Coal-Bearing Sediments Down to ~2.5 km below the Seafloor off Shimokita Peninsula, Japan

PubMed Central

Glombitza, Clemens; Adhikari, Rishi R.; Riedinger, Natascha; Gilhooly, William P.; Hinrichs, Kai-Uwe; Inagaki, Fumio

2016-01-01

Sulfate reduction is the predominant anaerobic microbial process of organic matter mineralization in marine sediments, with recent studies revealing that sulfate reduction not only occurs in sulfate-rich sediments, but even extends to deeper, methanogenic sediments at very low background concentrations of sulfate. Using samples retrieved off the Shimokita Peninsula, Japan, during the Integrated Ocean Drilling Program (IODP) Expedition 337, we measured potential sulfate reduction rates by slurry incubations with 35S-labeled sulfate in deep methanogenic sediments between 1276.75 and 2456.75 meters below the seafloor. Potential sulfate reduction rates were generally extremely low (mostly below 0.1 pmol cm−3 d−1) but showed elevated values (up to 1.8 pmol cm−3 d−1) in a coal-bearing interval (Unit III). A measured increase in hydrogenase activity in the coal-bearing horizons coincided with this local increase in potential sulfate reduction rates. This paired enzymatic response suggests that hydrogen is a potentially important electron donor for sulfate reduction in the deep coalbed biosphere. By contrast, no stimulation of sulfate reduction rates was observed in treatments where methane was added as an electron donor. In the deep coalbeds, small amounts of sulfate might be provided by a cryptic sulfur cycle. The isotopically very heavy pyrites (δ34S = +43‰) found in this horizon is consistent with its formation via microbial sulfate reduction that has been continuously utilizing a small, increasingly 34S-enriched sulfate reservoir over geologic time scales. Although our results do not represent in-situ activity, and the sulfate reducers might only have persisted in a dormant, spore-like state, our findings show that organisms capable of sulfate reduction have survived in deep methanogenic sediments over more than 20 Ma. This highlights the ability of sulfate-reducers to persist over geological timespans even in sulfate-depleted environments. Our study moreover represents the deepest evidence of a potential for sulfate reduction in marine sediments to date. PMID:27761134

Microbial Sulfate Reduction Potential in Coal-Bearing Sediments Down to ~2.5 km below the Seafloor off Shimokita Peninsula, Japan.

PubMed

Glombitza, Clemens; Adhikari, Rishi R; Riedinger, Natascha; Gilhooly, William P; Hinrichs, Kai-Uwe; Inagaki, Fumio

2016-01-01

Sulfate reduction is the predominant anaerobic microbial process of organic matter mineralization in marine sediments, with recent studies revealing that sulfate reduction not only occurs in sulfate-rich sediments, but even extends to deeper, methanogenic sediments at very low background concentrations of sulfate. Using samples retrieved off the Shimokita Peninsula, Japan, during the Integrated Ocean Drilling Program (IODP) Expedition 337, we measured potential sulfate reduction rates by slurry incubations with 35 S-labeled sulfate in deep methanogenic sediments between 1276.75 and 2456.75 meters below the seafloor. Potential sulfate reduction rates were generally extremely low (mostly below 0.1 pmol cm -3 d -1 ) but showed elevated values (up to 1.8 pmol cm -3 d -1 ) in a coal-bearing interval (Unit III). A measured increase in hydrogenase activity in the coal-bearing horizons coincided with this local increase in potential sulfate reduction rates. This paired enzymatic response suggests that hydrogen is a potentially important electron donor for sulfate reduction in the deep coalbed biosphere. By contrast, no stimulation of sulfate reduction rates was observed in treatments where methane was added as an electron donor. In the deep coalbeds, small amounts of sulfate might be provided by a cryptic sulfur cycle. The isotopically very heavy pyrites (δ 34 S = +43‰) found in this horizon is consistent with its formation via microbial sulfate reduction that has been continuously utilizing a small, increasingly 34 S-enriched sulfate reservoir over geologic time scales. Although our results do not represent in-situ activity, and the sulfate reducers might only have persisted in a dormant, spore-like state, our findings show that organisms capable of sulfate reduction have survived in deep methanogenic sediments over more than 20 Ma. This highlights the ability of sulfate-reducers to persist over geological timespans even in sulfate-depleted environments. Our study moreover represents the deepest evidence of a potential for sulfate reduction in marine sediments to date.

PTM Modeling of Dredged Suspended Sediment at Proposed Polaris Point and Ship Repair Facility CVN Berthing Sites - Apra Harbor, Guam

DTIC Science & Technology

2017-09-01

ADCP locations used for model calibration. ......................................................................... 12 Figure 4-3. Sample water...Example of fine sediment sample [Set d, Sample B30]. (B) Example of coarse sediment sample [Set d, sample B05...Turning Basin average sediment size distribution curve. ................................................... 21 Figure 5-5. Turning Basin average size

Suspended-sediment budget, flow distribution, and lake circulation for the Fox Chain of Lakes in Lake and McHenry Counties, Illinois, 1997-99

USGS Publications Warehouse

Schrader, David L.; Holmes, Robert R.

2000-01-01

The Fox Chain of Lakes is a glacial lake system in McHenry and Lake Counties in northern Illinois and southern Wisconsin. Sedimentation and nutrient overloading have occurred in the lake system since the first dam was built (1907) in McHenry to raise water levels in the lake system. Using data collected from December 1, 1997, to June 1, 1999, suspended-sediment budgets were constructed for the most upstream lake in the system, Grass Lake, and for the lakes downstream from Grass Lake. A total of 64,900 tons of suspended sediment entered Grass Lake during the study, whereas a total of 70,600 tons of suspended sediment exited the lake, indicating a net scour of 5,700 tons of sediment. A total of 44,100 tons of suspended sediment was measured exiting the Fox Chain of Lakes at Johnsburg, whereas 85,600 tons entered the system downstream from Grass Lake. These suspended-sediment loads indicate a net deposition of 41,500 tons downstream from Grass Lake, which represents a trapping efficiency of 48.5 percent. A large amount of recreational boating takes place on the Fox Chain of Lakes during summer months, and suspended-sediment load was observed to rise from 110 tons per day to 339 tons per day during the 1999 Memorial Day weekend (May 26 ?31, 1999). Presumably, this rise was the result of the boating traffic because no other hydrologic event is known to have occurred that might have caused the rise. This study covers a relatively short period and may not represent the long-term processes of the Fox Chain of Lakes system, although the sediment transport was probably higher than an average year. The bed sediments found on the bottom of the lakes are composed of mainly fine particles in the silt-clay range. The Grass Lake sediments were characterized as black peat with an organic content of between 9 and 18 percent, and the median particle size ranged from 0.000811 to 0.0013976 inches. Other bed material samples were collected at streamflow-gaging stations on the tributaries to the Fox Chain of Lakes. With the exception of Grass Lake Outlet at Lotus Woods, most of the bed sediments are sand size or larger. The bed material at the streamflow-gaging station at Grass Lake Outlet at Lotus Woods contains 31.5 percent silt- and clay-sized particles. The bed material at Nippersink Creek near Spring Grove also has higher silt content (10.7 percent) than the bed material found in the Fox River at Wilmot (2.1 percent) and Johnsburg (1.3 percent). Additionally, water velocities at 80 cross sections in the Fox Chain of Lakes were collected to provide sample circulation patterns during two separate 1-week periods, and discharge was measured at 18 locations in the lakes. These data were collected to be available for use in hydrodynamic models.

Shock metamorphism of planetary silicate rocks and sediments: Proposal for an updated classification system

NASA Astrophysics Data System (ADS)

Stöffler, Dieter; Hamann, Christopher; Metzler, Knut

2018-01-01

We reevaluate the systematics and geologic setting of terrestrial, lunar, Martian, and asteroidal "impactites" resulting from single or multiple impacts. For impactites derived from silicate rocks and sediments, we propose a unified and updated system of progressive shock metamorphism. "Shock-metamorphosed rocks" occur as lithic clasts or melt particles in proximal impactites at impact craters, and rarely in distal impactites. They represent a wide range of metamorphism, typically ranging from unshocked to shock melted. As the degree of shock metamorphism, at a given shock pressure, depends primarily on the mineralogical composition and the porosity of a rock or sediment sample, different shock classification systems are required for different types of planetary rocks and sediments. We define shock classification systems for eight rock and sediment classes which are assigned to three major groups of rocks and sediments (1) crystalline rocks with classes F, M, A, and U; (2) chondritic rocks (class C); and (3) sedimentary rocks and sediments with classes SR, SE, and RE. The abbreviations stand for felsic (F), mafic (M), anorthositic (A), ultramafic (U), sedimentary rocks (SR), unconsolidated sediments (SE), and regoliths (RE). In each class, the progressive stages of shock metamorphism are denominated S1 to Sx. These progressive shock stages are introduced as: S1-S7 for F, S1-S7 for M, S1-S6 for A, S1-S7 for U, S1-S7 for C, S1-S7 for SR, S1-S5 for SE, and S1-S6 for RE. S1 stands for "unshocked" and Sx (variable between S5 and S7) stands for "whole rock melting." We propose a sequence of symbols characterizing the degree of shock metamorphism of a sample, i.e., F-S1 to F-S7 with the option to add the tabulated pressure ranges (in GPa) in parentheses.

Organic and metal contamination in marine surface sediments of Guánica Bay, Puerto Rico.

PubMed

Whitall, David; Mason, Andrew; Pait, Anthony; Brune, Lia; Fulton, Michael; Wirth, Ed; Vandiver, Lisa

2014-03-15

Land based sources of pollution have the potential to adversely impact valuable coral reef ecosystems. In Guánica Bay (Puerto Rico) sediment samples collected and analyzed in 2009 demonstrate unusually high concentrations of total chlordane, total PCBs, nickel and chromium. A variety of other contaminants (total DDT, total PAHs, As, Cu, Hg, and Zn) were also at levels which may indicate sediment toxicity. With the exception of chromium, all of these contaminants were detected in coral tissues (Porites astreoides), although it is unclear at what level these contaminants affect coral health. PCBs and chlordane are environmentally persistent and likely represent legacy pollution from historical uses in close geographic proximity to the Bay. We hypothesize that the high nickel and chromium levels are due to a combination of naturally high Ni and Cr in rock and soils in the watershed, and enhanced (human driven) erosional rates. Published by Elsevier Ltd.

Characterization of stormwater runoff from bridge decks in eastern Massachusetts, 2014–16

USGS Publications Warehouse

Smith, Kirk P.; Sorenson, Jason R.; Granato, Gregory E.

2018-05-02

The quality of stormwater runoff from bridge decks (hereafter referred to as “bridge-deck runoff”) was characterized in a field study from August 2014 through August 2016 in which concentrations of suspended sediment (SS) and total nutrients were monitored. These new data were collected to supplement existing highway-runoff data collected in Massachusetts which were deficient in bridge-deck runoff concentration data. Monitoring stations were installed at three bridges maintained by the Massachusetts Department of Transportation in eastern Massachusetts (State Route 2A in the city of Boston, Interstate 90 in the town of Weston, and State Route 20 near Quinsigamond Village in the city of Worcester). The bridges had annual average daily traffic volumes from 21,200 to 124,000 vehicles per day; the land use surrounding the monitoring stations was 25 to 67 percent impervious.Automatic-monitoring techniques were used to collect more than 160 flow-proportional composite samples of bridge-deck runoff. Samples were analyzed for concentrations of SS, loss on ignition of suspended solids (LOI), particulate carbon (PC), total phosphorus (TP), total dissolved nitrogen (DN), and particulate nitrogen (PN). The distribution of particle size of SS also was determined for composite samples. Samples of bridge-deck runoff were collected year round during rain, mixed precipitation, and snowmelt runoff and with different dry antecedent periods throughout the 2-year sampling period.At the three bridge-deck-monitoring stations, median concentrations of SS in composite samples of bridge-deck runoff ranged from 1,490 to 2,020 milligrams per liter (mg/L); however, the range of SS in individual composites was vast at 44 to 142,000 mg/L. Median concentrations of SS were similar in composite samples collected from the State Route 2A and Interstate 90 bridge (2,010 and 2,020 mg/L, respectively), and lowest at the State Route 20 bridge (1,490 mg/L). Concentrations of coarse sediment (greater than 0.25 millimeters in diameter) dominated the SS matrix by more than an order of magnitude. Concentrations of LOI and PC in composite samples ranged from 15 to 1,740 mg/L and 6.68 to 1,360 mg/L, respectively, and generally represented less than 10 and 3 percent of the median mass of SS, respectively. Concentrations of TP in composite samples ranged from 0.09 to 7.02 mg/L; median concentrations of TP ranged from 0.505 to 0.69 mg/L and were highest on the bridge on State Route 2A in Boston. Concentrations of total nitrogen (TN) (sum DN and PN) in composite samples were variable (0.36 to 29 mg/L). Median DN (0.64 to 0.90 mg/L) concentrations generally represented about 40 percent of the TN concentration at each bridge and were similar to annual volume-weighted mean concentrations of nitrogen in precipitation in Massachusetts.Nonparametric statistical methods were used to test for differences between sample constituent concentrations among the three bridges. These results indicated that there are no statistically significant differences for concentrations of SS, LOI, PC, and TP among the three bridges (one-way analysis of variance test on rank-transformed data, 95-percent confidence level). Test results for concentrations of TN in composite samples indicated that concentrations of TN collected on State Route 20 near Quinsigamond Village were significantly higher than those concentrations collected on State Route 2A in Boston and Interstate 90 near Weston. Median concentrations of TN were about 93 and 55 percent lower at State Route 2A and at Interstate 90, respectively, compared to the median concentrations of TN at State Route 20.Samples of sediment were collected from five fixed locations on each bridge on three occasions during dry weather to calculate semiquantitative distributions of sediment yields on the bridge surface relative to the monitoring location. Mean yields of bridge-deck sediment during this study for State Route 2A in Boston, Interstate 90 near Weston, and State Route 20 near Quinsigamond Village were 1,500, 250, and 5,700 pounds per curb-mile, respectively. Sediment yields at each sampling location varied widely (26 to 25,000 pounds per curb-mile) but were similar to yields reported elsewhere in Massachusetts and the United States. Yields calculated for each sampling location indicated that the sediment was not evenly distributed across each bridge in this study for plausible reasons such as bridge slope, vehicular tracking, and bridge deterioration.Bridge-deck sediment quality was largely affected by the distribution of sediment particle size. Concentrations of TP in the fine sediment-size fraction (less than 0.0625 millimeter in diameter) of samples of bridge-deck sediment were about 6 times greater than in the coarse size fraction. Concentrations for many total-recoverable metals were 2 to 17 times greater in the fine size fraction compared to concentrations in the coarse size fraction (greater than or equal to 0.25 millimeter in diameter), and concentrations of total-recoverable copper and lead in the fine size fraction were 2 to 65 times higher compared to concentrations in the intermediate (greater than or equal to 0.0625 to 0.25 millimeter in diameter) or the coarse size fraction. However, the proportion of sediment particles less than 0.0625 millimeter in diameter in composite samples of bridge-deck runoff was small (median values range from 4 to 8 percent at each bridge) compared to the larger sediment particle-size mass. As a result, more than 50 percent of the sediment-associated TP, aluminum, chromium, manganese, and nickel was estimated to be associated with the coarse size fraction of the SS load. In contrast, about 95 percent of the estimated sediment-associated copper concentration was associated with the fine size fraction of the SS load.Version 1.0.2 of the Stochastic Empirical Loading and Dilution Model was used to simulate long-term (29–30-year) concentrations and annual yields of SS, TP, and TN in bridge-deck runoff and in discharges from a hypothetical stormwater treatment best-management practice structure. Three methods (traditional statistics, robust statistics, and L-moments) were used to calculate statistics for stochastic simulations because the high variability in measured concentration values during the field study resulted in extreme simulated concentrations. Statistics of each dataset, including the average, standard deviation, and skew of the common (base 10) logarithms, for each of the three bridges, and for a lumped dataset, were calculated and used for simulations; statistics representing the median of statistics calculated for the three bridges also were used for simulations. These median statistics were selected for the interpretive simulations so that the simulations could be used to estimate concentrations and yields from other, unmonitored bridges in Massachusetts. Comparisons of the standard and robust statistics indicated that simulation results with either method would be similar, which indicated that the large variability in simulated results was not caused by a few outliers. Comparison to statistics calculated by the L-moments methods indicated that L-moments do not produce extreme concentrations; however, they also do not produce results that represent the bulk of concentration data.The runoff-quality risk analysis indicated that bridge-deck runoff would exceed discharge standards commonly used for large, advanced wastewater treatment plants, but that commonly used stormwater best-management practices may reduce the percentage of exceedances by one-half. Results of simulations indicated that long-term average yields of TN, TP, and SS may be about 21.4, 6.44, and 40,600 pounds per acre per year, respectively. These yields are about 1.3, 3.4, and 16 times simulated ultra-urban highway yields in Massachusetts; however, simulations indicated that use of a best-management practice structure to treat bridge-deck runoff may reduce discharge yields to about 10, 2.8, and 4,300, pounds per acre per year, respectively.

Contribution of phytoplankton and benthic microalgae to inner shelf sediments of the north-central Gulf of Mexico

NASA Astrophysics Data System (ADS)

Grippo, M. A.; Fleeger, J. W.; Rabalais, N. N.; Condrey, R.; Carman, K. R.

2010-03-01

Marine sediment may contain both settled phytoplankton and benthic microalgae (BMA). In river-dominated, shallow continental shelf systems, spatial, and temporal heterogeneity in sediment type and water-column characteristics (e.g., turbidity and primary productivity) may promote spatial variation in the relative contribution of these two sources to the sediment organic matter pool available to benthic consumers. Here we use photosynthetic pigment analysis and microscopic examination of sediment microalgae to investigate how the biomass, composition, and degradation state of sediment-associated microalgae vary along the Louisiana (USA) inner shelf, a region strongly influenced by the Mississippi River. Three sandy shoals and surrounding muddy sediments with depths ranging from 4 to 20 m were sampled in April, August, and October 2007. Pigment composition suggested that sediment microalgae were primarily diatoms at all locations. We found no significant differences in sediment chlorophyll a concentrations (8-77 mg m -2) at the shoal and off-shoal stations. Epipelic pennate diatoms (considered indicative of BMA) made up a significantly greater proportion of sediment diatoms at sandy (50-98%) compared to more silty off-shoal stations (16-56%). The percentage of centric diatoms (indicators of settled phytoplankton) in the sediment was highest in August. Sediment total pheopigment concentrations on sandy stations (<20 mg m -2) were significantly lower than concentrations at nearby muddy stations (>40 mg m -2), suggesting differences in sediment microalgal degradation state. These observations suggest that BMA predominate in shallow sandy sediments and that phytodetritus predominates at muddy stations. Our results also suggest that the relative proportion of phytodetritus in the benthos was highest where phytoplankton biomass in the overlying water was greatest, independent of sediment type. The high biomass of BMA found on shoals suggests that benthic primary production on sandy sediments represents a potentially significant local source of sediment microalgal carbon that may be utilized by benthic consumers in continental shelf food webs.

Evaluation of surficial sediment toxicity and sediment physico-chemical characteristics of representative sites in the Lagoon of Venice (Italy)

NASA Astrophysics Data System (ADS)

Losso, C.; Arizzi Novelli, A.; Picone, M.; Marchetto, D.; Pessa, G.; Molinaroli, E.; Ghetti, P. F.; Volpi Ghirardini, A.

2004-11-01

Toxic hazard in sites with varying types and levels of contamination in the Lagoon of Venice was estimated by means of toxicity bioassays based on the early life-stages of the autochthonous sea urchin Paracentrotus lividus. Elutriate was chosen as the test matrix, due to its ability to highlight potential toxic effects towards sensitive biological components of the water column caused by sediment resuspension phenomena affecting the Lagoon. Surficial sediments (core-top 5 cm deep), directly influenced by resuspension/redeposition processes, and core sediments (core 20 cm deep), recording time-mediated contamination, were sampled in some sites located in the lagoonal area most greatly influenced by anthropogenic activities. Particle size, organic matter and water content were also analysed. In two sites, the results of physical parameters showed that the core-top sediments were coarser than the 20-cm core sediments. Sperm cell toxicity test results showed the negligible acute toxicity of elutriates from all investigated sites. The embryo toxicity test demonstrated a short-term chronic toxicity gradient for elutriates from the 20-cm core sediments, in general agreement both with the expected contamination gradient and with results of the Microtox® solid-phase test. Elutriates of the core-top 5-cm sediments revealed a totally inverted gradient, in comparison with that for the 20-cm core sediments, and the presence of a "hot spot" of contamination in the site chosen as a possible reference. Investigations on ammonia and sulphides as possible confounding factors excluded their contribution to this "hot spot". Integrated physico-chemical and toxicity results on sediments at various depths demonstrated the presence of disturbed sediments in the central basin of the Lagoon of Venice.

Sediment yields from small, steep coastal watersheds of California

USGS Publications Warehouse

Warrick, Jonathan A.; Melack, John M.; Goodridge, Blair M.

2015-01-01

Global inventories of sediment discharge to the ocean highlight the importance of small, steep watersheds (i.e., those having drainage areas less than 100,000 km2 and over 1000 m of relief) that collectively provide a dominant flux of sediment. The smallest of these coastal watersheds (e.g., those that have drainage areas less than 1000 km2) can represent a large portion of the drainage areas of active margin coasts, such as California’s coast, but remain almost universally unmonitored. Here we report on the suspended-sediment discharge of several small coastal watersheds (10-56 km2) of the Santa Ynez Mountains, California, that were found to have ephemeral discharge and suspended-sediment concentrations ranging between 1 and over 200,000 mgL-1. Sediment concentrations were weakly correlated with discharge (r2 = 0.10–0.25), and all types of hysteresis patterns were observed during high flows (clockwise, counterclockwise, no hysteresis, and complex). Sediment discharge varied strongly with time and was measurably elevated in one watershed following a wildfire. Although sediment yields varied by over 100-fold across the watersheds (e.g., 15 – 2100 tkm-2 yr -1during the relatively wet 2005 water year), the majority of sediment discharge (65-80%) occurred during only 1% of the time for all watersheds. Furthermore, sampling of dozens of high flow events provides evidence that sediment yields were generally related to peak discharge yields, although these relationships were not consistent across the watersheds. These results suggest that small watersheds of active margins can provide large fluxes of sediment to the coast, but that the rates and timing of this sediment discharge is more irregular in time – and thus more difficult to characterize – than the better monitored and studied watersheds that are 1000-100,000 km2.

Is the Role of Insular South East Asia as a Global Producer of Sediments Overestimated? Clues from Borneo

NASA Astrophysics Data System (ADS)

Latrubesse, E. M.; Park, E.; Aquino, S.

2017-12-01

Global studies have ascertained that relatively small drainage basins of Sumatra, Java, Borneo, Celebes, and Timor, which represent only 2% of the land draining to the ocean, may discharge about 4200 million tons/y of sediment. It means approximately 25% of the global sediment export to the ocean (Milliman and Farnsworth, 2013). With an area of 750,000 km2, Borneo, the 3rdlargest island in the world (after Greenland and New Guinea) could export from to the ocean approximately 910 Mt/y. About half (459 Mt) of the island discharge is from rivers draining Sarawak (Malaysia) to the South China Sea; while the other half (450 Mt) drain Kalimantan to the Java, Makassar Strait, and Celebes Seas (Milliman and Farnsworth, 2013). However, direct measurements of suspended sediments in Borneo are not available and the calculations of sediment yields and transferences to the ocean have been based on probabilistic curves. We hypothesize that the available data on the volume of sediment discharge are overestimated. We provide evidences that support our hypothesis through geological/geomorphological mappings, fluvial surveys, suspended sediment samplings, analyses on the channel stability of major rivers, and surface suspended sediments concentration modelling (SSSC) of river plumes in the coastal zone. Our initial assessments on sediment budget indicates that Borneo could produce and supply to the Ocean significantly less sediment than previously estimated by other authors. ReferencesMilliman and Farnsworth (2013), Appendix F (Asia) and G (Oceania), In River discharge to the coastal ocean, 289-329.

Late Quaternary sedimentological and climate changes at Lake Bosumtwi Ghana: new constraints from laminae analysis and radiocarbon age modeling

USGS Publications Warehouse

Shanahan, Timothy M.; Beck, J. Warren; Overpeck, Jonathan T.; McKay, Nicholas P.; Pigati, Jeffrey S.; Peck, John A.; Scholz, Christopher A.; Heil, Clifford W.; King, John W.

2012-01-01

The Lake Bosumtwi sediment record represents one of the longest and highest-resolution terrestrial records of paleoclimate change available from sub-Saharan Africa. Here we report a new sediment age model framework for the last ~ 45 cal kyr of sedimentation using a combination of high-resolution radiocarbon dating, Bayesian age-depth modeling and lamination counting. Our results highlight the practical limits of these methods for reducing age model uncertainties and suggest that even with very high sampling densities, radiocarbon uncertainties of at least a few hundred years are unavoidable. Age model uncertainties are smallest during the Holocene (205 yr) and the glacial (360 yr) but are large at the base of the record (1660 yr), due to a combination of decreasing sample density, larger calibration uncertainties and increases in radiocarbon age scatter. For portions of the chronology older than ~ 35 cal kyr, additional considerations, such as the use of a low-blank graphitization system and more rigorous sample pretreatment were necessary to generate a reliable age depth model because of the incorporation of small amounts of younger carbon. A comparison of radiocarbon age model results and lamination counts over the time interval ~ 15–30 cal kyr agree with an overall discrepancy of ~ 10% and display similar changes in sedimentation rate, supporting the annual nature of sediment laminations in the early part of the record. Changes in sedimentation rates reconstructed from the age-depth model indicate that intervals of enhanced sediment delivery occurred at 16–19, 24 and 29–31 cal kyr, broadly synchronous with reconstructed drought episodes elsewhere in northern West Africa and potentially, with changes in Atlantic meridional heat transport during North Atlantic Heinrich events. These data suggest that millennial-scale drought events in the West African monsoon region were latitudinally extensive, reaching within several hundred kilometers of the Guinea coast. This is inconsistent with a simple southward shift in the mean position of the monsoon rainbelt, and requires changes in moisture convergence as a result of either a reduction in the moisture content of the tropical rainbelt, decreased convection, or both.

Quantification of the effects of ocean acidification on sediment microbial communities in the environment: the importance of ecosystem approaches.

PubMed

Hassenrück, Christiane; Fink, Artur; Lichtschlag, Anna; Tegetmeyer, Halina E; de Beer, Dirk; Ramette, Alban

2016-05-01

To understand how ocean acidification (OA) influences sediment microbial communities, naturally CO2-rich sites are increasingly being used as OA analogues. However, the characterization of these naturally CO2-rich sites is often limited to OA-related variables, neglecting additional environmental variables that may confound OA effects. Here, we used an extensive array of sediment and bottom water parameters to evaluate pH effects on sediment microbial communities at hydrothermal CO2 seeps in Papua New Guinea. The geochemical composition of the sediment pore water showed variations in the hydrothermal signature at seep sites with comparable pH, allowing the identification of sites that may better represent future OA scenarios. At these sites, we detected a 60% shift in the microbial community composition compared with reference sites, mostly related to increases in Chloroflexi sequences. pH was among the factors significantly, yet not mainly, explaining changes in microbial community composition. pH variation may therefore often not be the primary cause of microbial changes when sampling is done along complex environmental gradients. Thus, we recommend an ecosystem approach when assessing OA effects on sediment microbial communities under natural conditions. This will enable a more reliable quantification of OA effects via a reduction of potential confounding effects. © FEMS 2016.

Collection, analysis, and age-dating of sediment cores from 56 U.S. lakes and reservoirs sampled by the U.S. Geological Survey, 1992-2001

USGS Publications Warehouse

Van Metre, Peter; Wilson, Jennifer T.; Fuller, Christopher C.; Callender, Edward; Mahler, Barbara J.

2004-01-01

The U.S. Geological Survey Reconstructed Trends National Synthesis study collected sediment cores from 56 lakes and reservoirs between 1992 and 2001 across the United States. Most of the sampling was conducted as part of the National Water-Quality Assessment (NAWQA) Program. The primary objective of the study was to determine trends in particle-associated contaminants in response to urbanization; 47 of the 56 lakes are in or near one of 20 U.S. cities. Sampling was done with gravity, piston, and box corers from boats and push cores from boats or by wading, depending on the depth of water and thickness of sediment being sampled. Chemical analyses included major and trace elements, organochlorine pesticides, polychlorinated biphenyls, polycyclic aromatic hydrocarbons, cesium-137, and lead-210. Age-dating of the cores was done on the basis of radionuclide analyses and the position of the pre-reservoir land surface in the reservoir and, in a few cases, other chemical or lithologic depth-date markers. Dates were assigned in many cores on the basis of assumed constant mass accumulation between known depth-date markers. Dates assigned were supported using a variety of other date markers including first occurrence and peak concentrations of DDT and polychlorinated biphenyls and peak concentration of lead. A qualitative rating was assigned to each core on the basis of professional judgment to indicate the reliability of age assignments. A total of 122 cores were collected from the 56 lakes and age dates were assigned to 113 of them, representing 54 of the 56 lakes. Seventy-four of the 122 cores (61 percent) received a good rating for the assigned age dates, 28 cores (23 percent) a fair rating, and 11 cores (9 percent) a poor rating; nine cores (7 percent) had no dates assigned. An analysis of the influence of environmental factors on the apparent quality of age-dating of the cores concluded that the most important factor was the mass accumulation rate (MAR) of sediment: the greater the MAR, the better the temporal discretization in the samples and the less important the effects of postdepositional sediment disturbance. These age-dated sediment cores provide the basis for local-, regional-, and national-scale interpretations of water-quality trends.

Passive sampling methods for contaminated sediments: State of the science for organic contaminants

PubMed Central

Lydy, Michael J; Landrum, Peter F; Oen, Amy MP; Allinson, Mayumi; Smedes, Foppe; Harwood, Amanda D; Li, Huizhen; Maruya, Keith A; Liu, Jingfu

2014-01-01

This manuscript surveys the literature on passive sampler methods (PSMs) used in contaminated sediments to assess the chemical activity of organic contaminants. The chemical activity in turn dictates the reactivity and bioavailability of contaminants in sediment. Approaches to measure specific binding of compounds to sediment components, for example, amorphous carbon or specific types of reduced carbon, and the associated partition coefficients are difficult to determine, particularly for native sediment. Thus, the development of PSMs that represent the chemical activity of complex compound–sediment interactions, expressed as the freely dissolved contaminant concentration in porewater (Cfree), offer a better proxy for endpoints of concern, such as reactivity, bioaccumulation, and toxicity. Passive sampling methods have estimated Cfree using both kinetic and equilibrium operating modes and used various polymers as the sorbing phase, for example, polydimethylsiloxane, polyethylene, and polyoxymethylene in various configurations, such as sheets, coated fibers, or vials containing thin films. These PSMs have been applied in laboratory exposures and field deployments covering a variety of spatial and temporal scales. A wide range of calibration conditions exist in the literature to estimate Cfree, but consensus values have not been established. The most critical criteria are the partition coefficient between water and the polymer phase and the equilibrium status of the sampler. In addition, the PSM must not appreciably deplete Cfree in the porewater. Some of the future challenges include establishing a standard approach for PSM measurements, correcting for nonequilibrium conditions, establishing guidance for selection and implementation of PSMs, and translating and applying data collected by PSMs. Integr Environ Assess Manag 2014;10:167–178. © 2014 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals, Inc. on behalf of SETAC. PMID:24307344

Tracking the Fate of Explosive-Trinitrotriazine (RDX) in Coastal Marine Ecosystems Using Stable Isotopic Tracer

NASA Astrophysics Data System (ADS)

Ariyarathna, T. S.; Ballentine, M.; Vlahos, P.; Smith, R. W.; Bohlke, J. K.; Tobias, C. R.; Fallis, S.; Groshens, T.; Cooper, C.

2017-12-01

It has been estimated that there are hundreds of explosive-contaminated sites all over the world and managing these contaminated sites is an international challenge. As coastal zones and estuaries are commonly impacted zones, it is vital to understand the fate and transport of munition compounds in these environments. The demand for data on sorption, biodegradation and mineralization of trinitrotriazine (RDX) in coastal ecosystems is the impetus for this study using stable nitrogen isotopes to track its metabolic pathways. Mesocosm experiments representing subtidal vegetated, subtidal unvegetated and intertidal marsh ecocosms were conducted. Steady state concentrations of RDX were maintained in the systems throughout two-week time duration of experiments. Sediment, pore-water and overlying water samples were analyzed for RDX and degradation products. Isotope analysis of the bulk sediments revealed an initial rising inventory of 15N followed by a decay illustrating the role of sediments on sorption and degradation of RDX in anaerobic sediments respectively. Both pore-water and overlying water samples were analyzed for 15N inventories of different inorganic nitrogen pools including ammonium, nitrate, nitrite, nitrous oxide and nitrogen gases. RDX is mineralized to nitrogen gas through a series of intermediates leaving nitrous oxide as the prominent metabolite of RDX. Significant differences in RDX metabolism were observed in the three different ecosystems based on sediment characteristics and redox conditions in the systems. Fine grained organic carbon rich sediments show notably higher mineralization rates of RDX in terms of production of its metabolites. Quantification of degradation and transformation rates leads to mass balances of RDX in the systems. Further analysis of results provides insights for mineralization pathways of RDX into both organic and inorganic nitrogen pools entering the marine nitrogen cycle.

Taking a step back: Himalayan erosion as seen from Bangladesh

NASA Astrophysics Data System (ADS)

Lupker, M.; France-Lanord, C.; Lavé, J.; Blard, P.; Galy, V.

2012-12-01

The Himalayan range represents the archetype of mountain building and is considered in many studies as the locus of intense interactions between climate, denudation and tectonics. A better understanding of these interactions requires that the flux of material removed from the system through erosion is known. The products of Himalayan erosion are exported to the Bengal fan and the Indian Ocean by two major rivers: the Ganga and Brahmaputra. These rivers provide the opportunity to quantify the Himalayan denudation rates as they integrate surface and tectonic processes across the entire basin. Basin wide erosion or denudation rates have classically been derived from the gauging of sediments fluxes. By coping with the inherent spatial and temporal variability of sediment concentration in rivers, sediment budgets yield average denudation rate over the observational period ranging from years to decades. Cosmogenic nuclides such as 10-Be allow the estimation of basin-wide denudation rates averaged over typical time scales of hundreds to thousand of years, from a single measurement in river sediments. We compare these methods for the case of the Ganga basin that drains the central part of the Himalayan range. By using a distal point of view, i.e. by sampling and evaluating the sediment flux at the outlet of the Ganga in Bangladesh we are able to propose an average denudation rate of the entire, central part of the Himalayan range. This sampling location offers the benefit of integrating the entire basin and its distance from the sediment source makes it also less prone to perturbations in the headwaters. However, the effects of 500 to 1000 km floodplain transfer on the sedimentary signal needs to be correctly evaluated. The gauged sediment flux can mainly be impacted by the sequestration of sediments in the floodplain. For the Ganga basin, sequestration is limited to ca. 10 % of the eroded sediment flux as deduced from geochemical mass balance approaches [1]. On their side, cosmogenic derived denudation rates in Bangladesh may also be biased by the exposure to cosmic-rays during sediment transfer in the floodplain. The comparison of the 10-Be concentration of sediments in the main Himalayan Rivers, upstream of the floodplain with sediments in Bangladesh and the use of modeling approaches suggests that this effect is nearly negligible [2]. The 10-Be concentration in sediments sampled in Bangladesh can therefore be used to infer the denudation rate of the entire range drained by the basin. Gauged sediment fluxes and 10-Be in sediments constrain the Himalayan denudation rate to ca. 0.8 and 1.0 mm/yr, respectively. Both independent methods yield similar denudations rates. However the uncertainties on both methods remain high, which does not allow us to speculate on the origin of the small difference between both rates. [1] Lupker et al., 2011 - JGR Earth Surf. 116 [2] Lupker et al., 2012 - EPSL 333-334 - p146:156

Distribution of radionuclides in Dardanelle Reservoir sediments.

PubMed

Forgy, J R; Epperson, C E; Swindle, D L

1984-02-01

Natural and reactor-discharged gamma-ray emitting radionuclides were measured in Dardanelle Reservoir surface sediments taken near the Arkansas Nuclear One Power Plant site. Samples represented several water depths and particle sizes, at 33 locations, in a field survey conducted in early September 1980. Radionuclide contents of dry sediments ranged as follows: natural radioactivity (40K as well as uranium and thorium decay products) 661-1210 Bq/kg; and reactor discharged radioactivity (137Cs, 134Cs, 60Co,, 58Co, 54Mn), no detectable activity to 237 Bq/kg. In general, radionuclide contents were positively correlated with decreasing sediment particle size. The average external whole-body and skin doses from all measurable reactor-discharged radionuclides were calculated according to the mathematical formula for determining external dose from sediment given by the U.S. Nuclear Regulatory Commission (NRC). Inside the discharge embayment near the reactor discharge canal, the doses were 1.7 X 10(-3) mSv/yr to the whole body and 2.0 X 10(-3) mSv/yr to the skin. Outside this area, the doses were 0.15 X 10(-3) and 0.18 X 10(-3) mSv/yr to the whole body and skin, respectively.

Sedimentation and Occurrence and Trends of Selected Chemical Constituents in Bottom Sediment, Empire Lake, Cherokee County, Kansas, 1905-2005

USGS Publications Warehouse

Juracek, Kyle E.

2006-01-01

For about 100 years (1850-1950), the Tri-State Mining District in parts of southeast Kansas, southwest Missouri, and northeast Oklahoma was one of the primary sources of lead and zinc ore in the world. The mining activity in the Tri-State District has resulted in substantial historical and ongoing input of cadmium, lead, and zinc to the environment including Empire Lake in Cherokee County, southeast Kansas. The environmental contamination caused by the decades of mining activity resulted in southeast Cherokee County being listed on the U.S. Environmental Protection Agency's National Priority List as a superfund hazardous waste site in 1983. To provide some of the information needed to support efforts to restore the ecological health of Empire Lake, a 2-year study was begun by the U.S. Geological Survey in cooperation with the U.S. Fish and Wildlife Service and the Kansas Department of Health and Environment. A combination of sediment-thickness mapping and bottom-sediment coring was used to investigate sediment deposition and the occurrence of cadmium, lead, zinc, and other selected constituents in the bottom sediment of Empire Lake. The total estimated volume and mass of bottom sediment in Empire Lake were 44 million cubic feet and 2,400 million pounds, respectively. Most of the bottom sediment was located in the main body and the Shoal Creek arm of the reservoir. Minimal sedimentation was evident in the Spring River arm of the reservoir. The total mass of cadmium, lead, and zinc in the bottom sediment of Empire Lake was estimated to be 78,000 pounds, 650,000 pounds, and 12 million pounds, respectively. In the bottom sediment of Empire Lake, cadmium concentrations ranged from 7.3 to 76 mg/kg (milligrams per kilogram) with an overall median concentration of 29 mg/kg. Compared to an estimated background concentration of 0.4 mg/kg, the historical mining activity increased the median cadmium concentration by about 7,200 percent. Lead concentrations ranged from 100 to 950 mg/kg with an overall median concentration of 270 mg/kg. Compared to an estimated background concentration of 33 mg/kg, the median lead concentration was increased by about 720 percent as a result of mining activities. The range in zinc concentrations was 1,300 to 13,000 mg/kg with an overall median concentration of 4,900 mg/kg. Compared to an estimated background concentration of 92 mg/kg, the median zinc concentration was increased by about 5,200 percent. Within Empire Lake, the largest sediment concentrations of cadmium, lead, and zinc were measured in the main body of the reservoir. Within the Spring River arm of the reservoir, increased concentrations in the downstream direction likely were the result of tributary inflow from Short Creek, which drains an area that has been substantially affected by historical lead and zinc mining. Compared to nonenforceable sediment-quality guidelines, all Empire Lake sediment samples (representing 21 coring sites) had cadmium concentrations that exceeded the probable-effects guideline (4.98 mg/kg), which represents the concentration above which toxic biological effects usually or frequently occur. With one exception, cadmium concentrations exceeded the probable-effects guideline by about 180 to about 1,400 percent. With one exception, all sediment samples had lead concentrations that exceeded the probable-effects guideline (128 mg/kg) by about 10 to about 640 percent. All sediment samples had zinc concentrations that exceeded the probable-effects guideline (459 mg/kg) by about 180 to about 2,700 percent. Overall, cadmium, lead, and zinc concentrations in the bottom sediment of Empire Lake have decreased over time following the end of lead and zinc mining in the area. However, the concentrations in the most recently deposited bottom sediment (determined for 4 of 21 coring sites) still exceeded the probable-effects guideline by about 440 to 640 percent for cadmium, about 40 to 80 percent for lead, and about 580

Microplastics in sediments from the littoral zone of the north Tunisian coast (Mediterranean Sea)

NASA Astrophysics Data System (ADS)

Abidli, Sami; Antunes, Joana C.; Ferreira, Joana L.; Lahbib, Youssef; Sobral, Paula; Trigui El Menif, Najoua

2018-05-01

The distribution of microplastics (MPs) was investigated in the sediments of five sampling sites from the northern Tunisian coast during June 2017. MPs were categorized according to type, colour and size. Representative MPs from the five sites were isolated for polymer identification using Fourier Transformed Infrared Spectroscopy in attenuated total reflectance mode (FTIR-ATR). Results showed that MPs were recovered, from all sediment samples, indicating for the first time, their extensive distribution in Tunisian coast. Concentrations varied from 141.20 ± 25.98 to 461.25 ± 29.74 items kg-1 dry weight. Fibres, fragments, Styrofoam®, pellets and films were the types registered in this study. With the exception of Menzel Bourguiba (MB), fibres significantly outnumbered plastic particles followed by fragments, Styrofoam®, films and pellets. The predominant colours are as follows: black > clear > white > red > blue > green for fibres, blue > white > clear > red > green > yellow > black for fragments, blue > white > black > clear for films while only white pellets and Styrofoam® were found. MPs particles ranged from 0.1 to 5 mm in length. A total of three polymer types were identified, polyethylene (PE), polypropylene (PP) and polystyrene (PS). Except for industrial pellets, the presence of MPs is likely due to the degradation of marine plastic debris accumulating in each site. This work provides original data of the presence of MPs in coastal sediments from Northern Tunisian coast.

Temporal dynamics of gastropod fauna on subtidal sandy sediments of the Ensenada de Baiona (NW Iberian Peninsula)

NASA Astrophysics Data System (ADS)

Moreira, J.; Aldea, C.; Troncoso, J. S.

2010-12-01

The temporal variation of the gastropod fauna inhabiting sandy sediments of the Ensenada de Baiona (Galicia, Spain) was studied at three subtidal sites from February 1996 to February 1997 by means of quantitative sampling. A total of 5,463 individuals representing 51 gastropod species and 22 families were found. The family Pyramidellidae was the most diverse in number of species (11 species), followed by Rissoidae and Trochidae (4 species each). The dogwhelk, Nassarius reticulatus, and the rissoid snail, Rissoa parva, were the numerically dominant species at the three studied sites; those and other abundant species showed their greatest densities by the end of summer and the beginning of autumn. In general, univariate measures of the assemblage (number of species, abundance, diversity and evenness) showed variations through time; greater values were recorded between summer and autumn depending on the site. Multivariate analyses done on abundance data showed certain seasonality in the evolution of the assemblage as expected for shallow subtidal sandy sediments at temperate latitudes; those seasonal changes were mostly related to variations in abundance of numerically dominant species. Although the measured sedimentary variables did not show significant correlations with faunal univariate parameters, sediment heterogeneity due to the presence of mats of Zostera marina L. and shells of dead bivalves might explain the differences in composition of the gastropod assemblage among sampling sites.

Review of environmental exposure concentrations of chemical warfare agent residues and associated the fish community risk following the construction and completion of the Nord Stream gas pipeline between Russia and Germany.

PubMed

Sanderson, Hans; Fauser, Patrik; Rahbek, Malene; Larsen, Jørn Bo

2014-08-30

This paper compiles all the measured chemical warfare agent (CWA) concentrations found in relation to the Nord Stream pipeline work in Danish waters for the past 5 years. Sediment and biota sampling were performed along the pipeline route in four campaigns, prior to (in 2008 and 2010), during (in 2011) and after (in 2012) the construction work. No parent CWAs were detected in the sediments. Patchy residues of CWA degradation products of Adamsite, Clark I, phenyldichloroarsine, trichloroarsine and Lewisite II, were detected in a total of 29 of the 391 sediment samples collected and analyzed the past 5 years. The cumulative fish community risk quotient for the different locations, calculated as a sum of background and added risk, ranged between 0 and 0.017 suggesting a negligible acute CWA risk toward the fish community. The added risk from sediment disturbance in relation to construction of the pipelines represents less than 2% of the total risk in the areas with the highest calculated risk. The analyses of benthic infauna corroborate the finding of CWA related low risk across the years. There was no significant difference in CWA risk before (2008) and after the pipeline construction (2012). Copyright © 2014 Elsevier B.V. All rights reserved.

Zoonotic and human parasites of inhabitants of Cueva de los Muertos Chiquitos, Rio Zape Valley, Durango, Mexico.

PubMed

Jiménez, F Agustín; Gardner, Scott L; Araújo, Adauto; Fugassa, Martín; Brooks, Richard H; Racz, Elizabeth; Reinhard, Karl J

2012-04-01

We present the first reconstruction of the parasitoses among the people of the Loma San Gabriel culture, as represented by 36 coprolites excavated from the Cueva de los Muertos Chiquitos in Durango, Mexico. The coprolites date to approximately 1,400-yr-ago. Species identified based on eggs recovered include the trematode Echinostoma sp., the tapeworms Hymenolepis sp. and Dipylidium caninum , and the nematodes Ancylostoma duodenale, Enterobius vermicularis, and Trichuris trichiura. After rehydration and screening, 2 methods were used to recover eggs from these samples including spontaneous sedimentation and flotation. Samples were analyzed by 3 different laboratories for independent verification and comparison of methods. Spontaneous sedimentation resulted in the discovery of hymenolepidid eggs that were not found with flotation. Sedimentation was a more-sensitive indicator of prevalence as well. The modified method of flotation permitted estimation of egg concentration and resulted in the detection of a few specimens not found by sedimentation. The results of both methods showed that 19 (of 36) coprolites contained helminth eggs. Our results detected the presence of pathogenic helminths including hookworms and whipworms. The cestodes found do not cause severe pathology in humans. The early dates of hookworm and whipworm, relative to other findings in the southwest United States, indicate that these parasites arrived relatively late in prehistory in Arizona and New Mexico, probably moving into the area with travelers from Mesoamerica.

Mycodiversity in marine sediments contaminated by heavy metals: preliminary results

NASA Astrophysics Data System (ADS)

Zotti, Mirca; Carbone, Cristina; Cecchi, Grazia; Consani, Sirio; Cutroneo, Laura; Di Piazza, Simone; Gabutto, Giacomo; Greco, Giuseppe; Vagge, Greta; Capello, Marco

2016-04-01

Fungi represent the main decomposers of woody and herbaceous substrates in the marine ecosystems. To date there is a gap in the knowledge about the global diversity and distribution of fungi in marine habitats. On the basis of their biological diversity and their role in ecosystem processes, marine fungi may be considered one of the most attractive groups of organisms in modern biotechnology, e.g. ecotoxic metal bioaccumulation. Here we report the data about the first mycological survey in the metal contaminated coastal sediments of the Gromolo Bay. The latter is located in Ligurian Sea (Eastern Liguria, Italy) and is characterized by an enrichment of heavy metals due to pollution of Gromolo Torrent by acidic processes that interest Fe-Cu sulphide mine. 24 samples of marine sediments were collected along a linear plot in front of the shoreline in July 2015. Each sample was separated into three aliquot for mineralogical, chemical analyses and fungal characterization. The sediment samples are characterised by clay fractions (illite and chlorite), minerals of ophiolitic rocks (mainly serpentine, pyroxene and plagioclase) and quartz and are enriched some chemical elements of environmental importance (such as Cu, Zn, Pb, Cd, As). For fungal characterisation the sediment samples were inoculated in Petri dishes on different culture media (Malt Extract Agar and Rose Bengal) prepared with sea water and added with antibiotics. The inoculated dishes were incubated at 20°C in the dark for 28 days. Every week fungal growth was monitored counting the number of colonies. Later, the colonies were isolated in axenic culture for further molecular analysis. The mycodiversity evaluate on the basis of Colony Forming Units (CFU) and microfungal-morphotype characterised by macro-and micro-morphology. Until now on the 72 Petri dishes inoculated 112 CFU of filamentous fungi were counted, among these about 50 morphotypes were characterized. The quantitative results show a mean value of 4.6 CFU per gram of sediments. The maximum value of 11 CFU g-1 has been recorded in two stations (off the Sestri Levante Tombolo), while the minimum value has been recorded closer to the coast. As concern qualitative results, the most recurrent genera are Aspergillus and Penicillium. These data confirm the occurrence of a mycobiota in these heavy metal contaminated sediments. Our preliminary results are a first contribution to the knowledge of presence of microfungi in marine sediments, and propel us to increase our research in order to find out new organisms for bioremediation purpose.

Variability within the 10-Year Pollen Rain of a Seasonal Neotropical Forest and Its Implications for Paleoenvironmental and Phenological Research

PubMed Central

Haselhorst, Derek S.; Moreno, J. Enrique; Punyasena, Surangi W.

2013-01-01

Tropical paleoecologists use a combination of mud-water interface and modern pollen rain samples (local samples of airborne pollen) to interpret compositional changes within fossil pollen records. Taxonomic similarities between the composition of modern assemblages and fossil samples are the basis of reconstructing paleoclimates and paleoenvironments. Surface sediment samples reflect a time-averaged accumulation of pollen spanning several years or more. Due to experimental constraints, modern pollen rain samples are generally collected over shorter timeframes (1–3 years) and are therefore less likely to capture the full range of natural variability in pollen rain composition and abundance. This potentially biases paleoenvironmental interpretations based on modern pollen rain transfer functions. To determine the degree to which short-term environmental change affects the composition of the aerial pollen flux of Neotropical forests, we sampled ten years of the seasonal pollen rain from Barro Colorado Island, Panama and compared it to climatic and environmental data over the same ten-year span. We establish that the pollen rain effectively captured the strong seasonality and stratification of pollen flow within the forest canopy and that individual taxa had variable sensitivity to seasonal and annual changes in environmental conditions, manifested as changes in pollen productivity. We conclude that modern pollen rain samples capture the reproductive response of moist tropical plants to short-term environmental change, but that consequently, pollen rain-based calibrations need to include longer sampling periods (≥7 years) to reflect the full range of natural variability in the pollen output of a forest and simulate the time-averaging present in sediment samples. Our results also demonstrate that over the long-term, pollen traps placed in the forest understory are representative samples of the pollen output of both canopy and understory vegetation. Aerial pollen traps, therefore, also represent an underutilized means of monitoring the pollen productivity and reproductive behavior of moist tropical forests. PMID:23320089

Variability within the 10-year pollen rain of a seasonal neotropical forest and its implications for paleoenvironmental and phenological research.

PubMed

Haselhorst, Derek S; Moreno, J Enrique; Punyasena, Surangi W

2013-01-01

Tropical paleoecologists use a combination of mud-water interface and modern pollen rain samples (local samples of airborne pollen) to interpret compositional changes within fossil pollen records. Taxonomic similarities between the composition of modern assemblages and fossil samples are the basis of reconstructing paleoclimates and paleoenvironments. Surface sediment samples reflect a time-averaged accumulation of pollen spanning several years or more. Due to experimental constraints, modern pollen rain samples are generally collected over shorter timeframes (1-3 years) and are therefore less likely to capture the full range of natural variability in pollen rain composition and abundance. This potentially biases paleoenvironmental interpretations based on modern pollen rain transfer functions. To determine the degree to which short-term environmental change affects the composition of the aerial pollen flux of Neotropical forests, we sampled ten years of the seasonal pollen rain from Barro Colorado Island, Panama and compared it to climatic and environmental data over the same ten-year span. We establish that the pollen rain effectively captured the strong seasonality and stratification of pollen flow within the forest canopy and that individual taxa had variable sensitivity to seasonal and annual changes in environmental conditions, manifested as changes in pollen productivity. We conclude that modern pollen rain samples capture the reproductive response of moist tropical plants to short-term environmental change, but that consequently, pollen rain-based calibrations need to include longer sampling periods (≥7 years) to reflect the full range of natural variability in the pollen output of a forest and simulate the time-averaging present in sediment samples. Our results also demonstrate that over the long-term, pollen traps placed in the forest understory are representative samples of the pollen output of both canopy and understory vegetation. Aerial pollen traps, therefore, also represent an underutilized means of monitoring the pollen productivity and reproductive behavior of moist tropical forests.

Does bioleaching represent a biotechnological strategy for remediation of contaminated sediments?

PubMed

Fonti, Viviana; Dell'Anno, Antonio; Beolchini, Francesca

2016-09-01

Bioleaching is a consolidated biotechnology in the mining industry and in bio-hydrometallurgy, where microorganisms mediate the solubilisation of metals and semi-metals from mineral ores and concentrates. Bioleaching also has the potential for ex-situ/on-site remediation of aquatic sediments that are contaminated with metals, which represent a key environmental issue of global concern. By eliminating or reducing (semi-)metal contamination of aquatic sediments, bioleaching may represent an environmentally friendly and low-cost strategy for management of contaminated dredged sediments. Nevertheless, the efficiency of bioleaching in this context is greatly influenced by several abiotic and biotic factors. These factors need to be carefully taken into account before selecting bioleaching as a suitable remediation strategy. Here we review the application of bioleaching for sediment bioremediation, and provide a critical view of the main factors that affect its performance. We also discuss future research needs to improve bioleaching strategies for contaminated aquatic sediments, in view of large-scale applications. Copyright © 2016 Elsevier B.V. All rights reserved.

Sources and ages of fine-grained sediment to streams using fallout radionuclides in the Midwestern United States

USGS Publications Warehouse

Gellis, Allen; Fuller, Christopher C.; Van Metre, Peter C.

2017-01-01

Fallout radionuclides, 7Be and 210Pbex, sampled in bed sediment for 99 watersheds in the Midwestern region of the United States and in 15 samples of suspended sediment from 3 of these watersheds were used to partition upland from channel sources and to estimate the age or the time since the surface-derived portion of sediment was on the land surface (0–∼1 year). Channel sources dominate: 78 of the 99 bed material sites (79%) have >50% channel-derived sediment, and 9 of the 15 suspended-sediment samples (60%) have >50% channel-derived sediment. 7Be was detected in 82 bed sediment samples and all 15 suspended-sediment samples. The surface-derived portion of 54 of the 80 (68%) streams with detectable 7Be and 210Pbex were ≤ 100 days old and the surface-derived portion of all suspended-sediment samples were ≤ 100 days old, indicating that surface-derived fine-grained sediment moves rapidly though these systems. The concentrations of two hydrophobic pesticides–DDE and bifenthrin–are correlated with the proportion of surface-derived sediment, indicating a link between geomorphic processes and particle-associated contaminants in streams. Urban areas had the highest pesticide concentrations and the largest percentage of surface-derived sediment. Although the percentage of surface-derived sediment is less than channel sources at most of the study sites, the relatively young age of the surface-derived sediment might indicate that management actions to reduce sediment contamination where the land surface is an important source could have noticeable effects.

Microbial communities and their predicted metabolic functions in a desiccating acid salt lake.

PubMed

Zaikova, Elena; Benison, Kathleen C; Mormile, Melanie R; Johnson, Sarah Stewart

2018-05-01

The waters of Lake Magic in Western Australia are among the most geochemically extreme on Earth. This ephemeral saline lake is characterized by pH as low as 1.6 salinity as high as 32% total dissolved solids, and unusually complex geochemistry, including extremely high concentrations of aluminum, silica, and iron. We examined the microbial composition and putative function in this extreme acid brine environment by analyzing lake water, groundwater, and sediment samples collected during the austral summer near peak evapoconcentration. Our results reveal that the lake water metagenome, surprisingly, was comprised of mostly eukaryote sequences, particularly fungi and to a lesser extent, green algae. Groundwater and sediment samples were dominated by acidophilic Firmicutes, with eukaryotic community members only detected at low abundances. The lake water bacterial community was less diverse than that in groundwater and sediment, and was overwhelmingly represented by a single OTU affiliated with Salinisphaera. Pathways associated with halotolerance were found in the metagenomes, as were genes associated with biosynthesis of protective carotenoids. During periods of complete desiccation of the lake, we hypothesize that dormancy and entrapment in fluid inclusions in halite crystals may increase long-term survival, leading to the resilience of complex eukaryotes in this extreme environment.

The Clinch River study--An investigation of the fate of radionuclides released to a surface stream

USGS Publications Warehouse

Pickering, R.J.; Carrigan, P.H.; Parker, F.L.

1965-01-01

The Clinch River Study is a multiagency effort to evaluate the physical, chemical, and biological effects of the release to de Clinch River of low-level radioactive wastes from the Oak Ridge National Laboratory. The major radionuclides released are ruthenium-106, cesium-137, cobalt-60, and strontium-90. Hydrologic and biologic studies have indicated that the radiation doses in the river are well below maximum acceptable levels. Radionuclide concentrations in river water have been measured at seven sampling stations on the Clinch and Tennessee Rivers. Mass-balance calculations for 44 weeks of sampling indicate that losses of radionuclides from the water phase to the river-bottom sediments represent only a very small part of the total radioactivity released to the river. A study of the Clinch River bottom-sediment cores collected in 1962 has disclosed a recurring pattern of variation in radioactivity with depth which may reflect past events in waste-disposal operations at the laboratory. Current investigations are expected to provide information about the chemical forms in which the major radionuclides exist and the mechanisms by which they were incorporated in the sediments.

Prediction of Suspended Sediment in Rivers Using Artificial Neural Networks: Implications for Development of Sediment Budgets

NASA Astrophysics Data System (ADS)

Hamshaw, S. D.; Underwood, K.; Rizzo, D.; Wemple, B. C.; Dewoolkar, M.

2013-12-01

Over 1,000 river miles in Vermont are either impaired or stressed by excessive sedimentation. The higher streamflows and incised river channels have resulted in increased bed and bank erosion. As the climate in Vermont is expected to feature greater and more frequent precipitation events and winter rainfall, the potential for increased sediment loading from erosion processes in the watershed and along the channel are high and a major concern for water resource managers. Typical sediment monitoring comprises periodic sampling during storm events and is often limited to gauged streams with flow data. Continuous turbidity monitoring enhances our understanding of river dynamics by offering high-resolution, temporal measurements to better quantify the total sediment loading occurring during and between storm events. Artificial neural networks, that mimic learning patterns of the human brain, have been effective at predicting flow in small, ungauged rivers using local climate data. This study advances this technology by using an ANN algorithm known as a counter-propagation neural network (CPNN) to predict discharge and suspended sediment in small streams. The first distributed network of continuous turbidity sensors (DTS-12) was deployed in Vermont in the Mad River Watershed, located in Central Vermont. The Mad River and five tributaries were selected as a test bed because seven years of periodic turbidity sampling data are available, it represents a range of watershed characteristics, and because the watershed is also being used for hydrologic model development using the Distributed-Hydrology-Soils-Vegetation Model (DHSVM). Comparison with the DHSVM simulations will allow estimation of the most-likely sources of sediment from the entire watershed and individual subwatersheds. In addition, recent field studies have commenced the quantification of erosion occurring from unpaved roads and streambanks in the same watershed. Periodic water quality sampling during storm events enabled turbidity versus TSS relationships to be established. Sub-watersheds with monitored turbidity and stage also have 15-minute precipitation, soil moisture and air and water temperature data being collected. Stage sensors and theoretical rating curves developed using HEC-RAS and calibrated with discharge measurements are used to validate the flow predictions from the CPNN. The real-time turbidity data are used to train and test the suspended sediment predictions from the CPNN network at each site. The turbidity data are also used to train the CPNN on a subset of tributaries and test on the remaining subwatersheds. Reasonable estimates of suspended sediment discharged from the tributaries and the main stem of the Mad River are calculated and compared enabling a more accurate foundation for building a sediment budget. Results of this study will assist managers in prioritizing mitigation projects to reduce impacts of sediment loading.

Trawling-induced alterations of deep-sea sediment accumulation rates during the Anthropocene

NASA Astrophysics Data System (ADS)

Puig, P.; Paradis, S.; Masque, P.; Martin, J.; Juan, X.; Palanques, A.

2015-12-01

Commercial bottom trawling causes direct physical disturbance of the marine sedimentary environments by scraping and ploughing the seabed, generating periodic resuspension of surface sediments. However, the quantification of the sediment that is removed by trawling and exported across the continental margin remains largely unaddressed, and the preservation of the signal of such impacts in the geological record have been mostly overlooked. The analysis of sediment cores collected along the Catalan margin (NW Mediterranean) has allowed evaluating the contribution of this anthropogenic activity to the present-day sediment dynamics. Sediment cores at intensively trawled sites are characterized by over-consolidated sediments with lower 210Pb surface concentrations and inventories that indicate widespread erosion of recent sedimentary deposits. In turn, combined 210Pb and 137Cs chronologies indicate a significant increase of sediment accumulation rates within submarine canyon environments since the 1970s, coincidently with a strong impulse in the industrialization of the trawling fleets of this region. Two sampling sites that exhibited high sediment accumulation rates (0.6-0.7 cm/y) were reoccupied 1-2 decades after the first studies and revealed a second and even larger increase of sediment accumulation rates (>2 cm/y) occurring at the beginning of the XXI century. This recent change has been attributed to a preferential displacement of the trawling fleet towards fishing grounds surrounding submarine canyons and, also, to technical improvements in trawling vessels, presumably related to financial subsidies provided to the fishing sector. The alteration of sediment accumulation rates described in this continental margin may occur in many regions of the World's oceans given the wide geographical distribution of this human activity, and therefore, it could represent a potential marker of the Anthropocene in deep-sea environments.

Occurrence, distribution, and concentrations of selected contaminants in streambed- and suspended-sediment samples collected in Bexar County, Texas, 2007-09

USGS Publications Warehouse

Wilson, Jennifer T.

2011-01-01

High concentrations of sediment-associated contaminants are typically associated with urban areas such as San Antonio, Texas, in Bexar County, the seventh most populous city in the United States. U.S. Geological Survey personnel periodically collected surficial streambed-sediment samples during 2007-09 and collected suspended-sediment samples from selected streams after storms during 2008 and 2009. All sediment samples were analyzed for major and trace elements, pesticides, polychlorinated biphenyls, and polycyclic aromatic hydrocarbons.

Summary geochemical maps for samples of rock, stream sediment, and nonmagnetic heavy-mineral concentrate, Sweetwater Roadless Area, Mono County, California and Lyon and Douglas Counties, Nevada

USGS Publications Warehouse

Chaffee, Maurice A.

1986-01-01

Map A shows the locations of all sites where rock samples were collected for this report and the distributions of anomalous concentrations for 12 elements in the 127 rock samples collected. In a similar manner, map B shows the collection sites for 59 samples of minus-60-mesh stream sediment, and 59 samples of nonmagnetic heavy-mineral concentrate derived from stream sediment and also shows the distributions of anomalous concentrations for 13 elements in the stream-sediment samples and 17 elements in the concentrate samples. Map C shows outlines of those drainage basins containing samples of stream sediment and concentrate with anomalous element concentrations and also shows weighted values for each outlined basin based on the number of elements with anomalous concentrations in each stream-sediment and concentrate sample and on the degree to which these concentrations are anomalous in each sample.

An evaluation of the toxicity of contaminated sediments from Waukegan Harbor, Illinois, following remediation

USGS Publications Warehouse

Kemble, N.E.; Hardesty, D.G.; Ingersoll, C.G.; Johnson, B. Thomas; Dwyer, F.J.; MacDonald, D.D.

2000-01-01

Waukegan Harbor in Illinois was designated as a Great Lakes Area of Concern due to high concentrations of sediment-associated polychlorinated biphenyls (PCBs). The objective of this study was to evaluate the toxicity of 20 sediment samples collected after remediation (primarily dredging) of Waukegan Harbor for PCBs. A 42-day whole sediment toxicity test with the amphipod Hyalella azteca (28-day sediment exposure followed by a 14-day reproductive phase) and sediment toxicity tests with Microtox® were conducted to evaluate sediments from Waukegan Harbor. Endpoints measured were survival, growth, and reproduction (amphipods) and luminescent light emission (bacteria). Survival of amphipods was significantly reduced in 6 of the 20 sediment samples relative to the control. Growth of amphipods (either length or weight) was significantly reduced relative to the control in all samples. However, reproduction of amphipods identified only two samples as toxic relative to the control. The Microtox basic test, conducted with organic extracts of sediments identified only one site as toxic. In contrast, the Microtox solid-phase test identified about 50% of the samples as toxic. A significant negative correlation was observed between reproduction and the concentration of three polynuclear aromatic hydrocarbons (PAHs) normalized to total organic carbon. Sediment chemistry and toxicity data were evaluated using sediment quality guidelines (consensus-based probable effect concentrations, PECs). Results of these analyses indicate that sediment samples from Waukegan Harbor were toxic to H. azteca contaminated at similar contaminant concentrations as sediment samples that were toxic to H. azteca from other areas of the United States. The relationship between PECs and the observed toxicity was not as strong for the Microtox test. The results of this study indicate that the first phase of sediment remediation in Waukegan Harbor successfully lowered concentrations of PCBs at the site. Though the sediments were generally not lethal, there were still sublethal effects of contaminants in sediments at this site observed on amphipods in long-term exposures (associated with elevated concentrations of metals, PCBs, and PAHs).

Speciation and bioavailability of mercury in sediments impacted by gold mining in Colombia.

PubMed

Pinedo-Hernández, José; Marrugo-Negrete, José; Díez, Sergi

2015-01-01

Mercury (Hg) speciation and bioavailability were studied in surface sediments affected by artisanal and small-scale gold mining (ASGM) in the Mojana region of Colombia. The results demonstrated higher levels in sampling stations that receive water streams carrying Hg from mining areas. The T-Hg concentrations were slightly elevated with values between 196.2 and 1187.6 ng g(-1) dry weight (dw) (mean 524.2±256.8 ng g(-1) dw). The MeHg concentrations were significantly correlated with the T-Hg and organic matter (OM) and represent between 1.7% and 3.6% (mean: 2.6%) of the T-Hg. A five-step sequential extraction procedure shown that most of T-Hg in sediments occur primarily as organically bound Hg (Hg-o), which constitutes 48.4% of the T-Hg, followed by elemental Hg fraction (Hg-e) bound to amorphous compounds, such as Fe/Mn oxides with 26.5%, and the fraction bound to sulfur (Hg-s), which constitutes 18.7%. Exchangeable Hg (Hg-w; water-soluble Hg and stomach acid soluble mercury; Hg-h) represents between 1.7% and 4.7%. These fractions constitute a low percentage but exhibit a high level of risk when entering the water column, and they can bioaccumulate in organisms. The significant relationship between OM, T-Hg and MeHg suggests an important role in the control of the distribution, mobility and bioavailability of the Hg in the sediments. Copyright © 2014 Elsevier Ltd. All rights reserved.

Estimating total suspended sediment yield with probability sampling

Treesearch

Robert B. Thomas

1985-01-01

The ""Selection At List Time"" (SALT) scheme controls sampling of concentration for estimating total suspended sediment yield. The probability of taking a sample is proportional to its estimated contribution to total suspended sediment discharge. This procedure gives unbiased estimates of total suspended sediment yield and the variance of the...

Toxicity of sediment cores collected from the Ashtabula River in northeastern Ohio, USA, to the amphipod Hyalella azteca

USGS Publications Warehouse

Ingersoll, C.G.; Kemble, N.E.; Kunz, J.L.; Brumbaugh, W.G.; MacDonald, D.D.; Smorong, D.

2009-01-01

This study was conducted to support a Natural Resource Damage Assessment and Restoration project associated with the Ashtabula River in Ohio. The objective of the study was to evaluate the chemistry and toxicity of 50 sediment samples obtained from five cores collected from the Ashtabula River (10 samples/core, with each 10-cm-diameter core collected to a total depth of about 150 cm). Effects of chemicals of potential concern (COPCs) measured in the sediment samples were evaluated by measuring whole-sediment chemistry and whole-sediment toxicity in the sediment samples (including polycyclic aromatic hydrocarbons [PAHs], polychlorinated biphenyls [PCBs], organochlorine pesticides, and metals). Effects on the amphipod Hyalella azteca at the end of a 28-day sediment toxicity test were determined by comparing survival or length of amphipods in individual sediment samples in the cores to the range of responses of amphipods exposed to selected reference sediments that were also collected from the cores. Mean survival or length of amphipods was below the lower limit of the reference envelope in 56% of the sediment samples. Concentrations of total PCBs alone in some samples or concentrations of total PAHs alone in other samples were likely high enough to have caused the reduced survival or length of amphipods (i.e., concentrations of PAHs or PCBs exceeded mechanistically based and empirically based sediment quality guidelines). While elevated concentrations of ammonia in pore water may have contributed to the reduced length of amphipods, it is unlikely that the reduced length was caused solely by elevated ammonia (i.e., concentrations of ammonia were not significantly correlated with the concentrations of PCBs or PAHs and concentrations of ammonia were elevated both in the reference sediments and in the test sediments). Results of this study show that PAHs, PCBs, and ammonia are the primary COPCs that are likely causing or substantially contributing to the toxicity to sediment-dwelling organisms. ?? 2009 US Government.

Uranium hydrogeochemical and stream sediment reconnaissance of the Albuquerque NTMS Quadrangle, New Mexico, including concentrations of forty-three additional elements

DOE Office of Scientific and Technical Information (OSTI.GOV)

Maassen, L.W.; Bolivar, S.L.

1979-06-01

The Los Alamos Scientific Laboratory conducted a hydrogeochemical and stream sediment reconnaissance for uranium. Totals of 408 water and 1538 sediment samples were collected from 1802 locations over a 20 100-km/sup 2/ area at an average density of one location per 11 km/sup 2/. Water samples were collected from springs, wells, and streams; sediments samples were collected predominantly from streams, but also from springs. All water samples were analyzed for uranium and 12 other elements. Sediment samples were analyzed for uranium and 42 additional elements. The uranium concentrations in water samples range from below the detection limit of 0.02 ppBmore » to 194.06 ppB. The mean uranium concentration for all water types containing < 40 ppB uranium is 1.98 ppB. Six samples contained uranium concentrations > 40.00 ppB. Well waters have the highest mean uranium concentration; spring waters have the lowest. Clusters of water samples that contain anomalous uranium concentrations are delineated in nine areas. Sediments collected from the quadrangle have uranium concentrations that range between 0.63 ppM and 28.52 ppM, with a mean for all sediments of 3.53 ppM. Eight areas containing clusters of sediments with anomalous uranium concentrations are delineated. One cluster contains sample locations within the Ambrosia Lake uranium district. Five clusters of sediment samples with anomalous uranium concentrations were collected from streams that drain the Jemez volcanic field. Another cluster defines an area just northeast of Albuquerque where streams drain Precambrian rocks, predominantly granites, of the Sandia Mountains. The last cluster, consisting of spring sediments from Mesa Portales, was collected near the contact of the Tertiary Ojo Alamo sandstone with underlying Cretaceous sediments. Sediments from these springs exhibit some of the highest uranium values reported and are associated with high uranium/thorium ratios.« less

Only pick the right grains: Modelling the bias due to subjective grain-size interval selection for chronometric and fingerprinting approaches.

NASA Astrophysics Data System (ADS)

Dietze, Michael; Fuchs, Margret; Kreutzer, Sebastian

2016-04-01

Many modern approaches of radiometric dating or geochemical fingerprinting rely on sampling sedimentary deposits. A key assumption of most concepts is that the extracted grain-size fraction of the sampled sediment adequately represents the actual process to be dated or the source area to be fingerprinted. However, these assumptions are not always well constrained. Rather, they have to align with arbitrary, method-determined size intervals, such as "coarse grain" or "fine grain" with partly even different definitions. Such arbitrary intervals violate principal process-based concepts of sediment transport and can thus introduce significant bias to the analysis outcome (i.e., a deviation of the measured from the true value). We present a flexible numerical framework (numOlum) for the statistical programming language R that allows quantifying the bias due to any given analysis size interval for different types of sediment deposits. This framework is applied to synthetic samples from the realms of luminescence dating and geochemical fingerprinting, i.e. a virtual reworked loess section. We show independent validation data from artificially dosed and subsequently mixed grain-size proportions and we present a statistical approach (end-member modelling analysis, EMMA) that allows accounting for the effect of measuring the compound dosimetric history or geochemical composition of a sample. EMMA separates polymodal grain-size distributions into the underlying transport process-related distributions and their contribution to each sample. These underlying distributions can then be used to adjust grain-size preparation intervals to minimise the incorporation of "undesired" grain-size fractions.

Chemical diagenesis, porosity reduction, and rock strength, IODP Site U1480: Influences on great earthquakes at shallow depths

NASA Astrophysics Data System (ADS)

Song, Insun; Milliken, Kitty; Dugan, Brandon; Bourlange, Sylvain; Colson, Tobias; Frederik, Marina; Jeppson, Tamara; Kuranaga, Mebae; Nair, Nisha; Henstock, Timothy

2017-04-01

International Ocean Discovery Program (IODP) Expedition 362 drilled two sites, U1480 and U1481, on the Indian oceanic plate ˜250 km west of the Sunda subduction zone to a maximum depth of 1500 meters below seafloor (mbsf). One of the primary objectives was to understand the mechanism of great earthquakes such as the 2004 Sumatra earthquake (Mw 9.0) which showed unexpectedly shallow megathrust slip by establishing the initial and evolving properties of the North Sumatran incoming sedimentary section. Core sampling and logging from the complete sedimentary section at U1480 indicates a distinct change in sedimentation rate from a slowly deposited pelagic system to a rapidly deposited submarine fan system at late Miocene. Following burial, sediments of the Nicobar Fan underwent compaction leading to porosity reduction from 66±9% near seafloor to ˜30% at the base of the sampled Nicobar Fan section (˜1250 mbsf), representing a normal consolidation behavior. Rock strength gradually increases with depth as the sediments are mechanically compacted. Below the fan (1250-1415 mbsf), the pelagic sediments are composed of tuffaceous, calcareous, and siliceous sediments/rocks and their porosity is dependent upon lithology more than upon depth. Tuffaceous materials exhibit high porosity ranging from ˜30-60%, even higher than that of overlying layers. However, porosity of most calcareous samples is lower than 20% at the same depth. The large variation in porosity depends on the degree of cementation, which in turn is controlled by grain assemblage composition and environmental conditions such as slow sedimentation rates and locally high temperatures related to igneous activity as documented by local igneous intrusives and extrusives. The minor cementation in tuffaceous sandy sediments has retained high porosity, but strengthened their skeleton so as to bear the overburden. The low porosity in calcareous rocks is considered to come from extensive cementation rather than mechanical compaction. The rock strengthening by mechanical compaction is dependent on effective stress, and does not facilitate storage of a large amount of elastic energy at shallow depth. However, chemical diagenesis (cementation) can lead to high strength that does not necessarily arise directly from burial. This chemical diagenesis potentially influences sediment strengthening that localizes great earthquakes at shallow depths.

Microphytobenthos in ecotoxicology: a review of the use of marine benthic diatoms in bioassays.

PubMed

Araújo, Cristiano V M; Blasco, Julián; Moreno-Garrido, Ignacio

2010-08-01

Contamination in coastal zones is an increasing problem that adversely affects biological diversity and the functioning of coastal ecosystems. Sediment is an important compartment of these zones since large quantities of diverse contaminants can accumulate there. Whole-sediment toxicity assays are of increasing importance, and several assay methods using mainly invertebrates have been developed. However, an important part of the benthic community, the microphytobenthos (represented principally by benthic diatoms and cyanobacteria), has surprisingly been neglected. Recently, comprehensive studies have been conducted using benthic marine microalgae with the object of establishing a toxicity assay method for sediment samples. The main results published to date in the literature and obtained by our own team have been compiled and are discussed in this review. The value and feasibility of using certain organisms of the microphytobenthos group in ecotoxicology studies are also discussed, and a sediment quality guideline based on multivariate procedure has been derived from data obtained in previous studies. Finally, future perspectives for research in this field are discussed. Copyright 2010 Elsevier Ltd. All rights reserved.

Levels and sources of heavy metals and PAHs in sediment of Djibouti-city (Republic of Djibouti).

PubMed

Mahdi Ahmed, Moussa; Doumenq, Pierre; Awaleh, Mohamed Osman; Syakti, Agung Dhamar; Asia, Laurence; Chiron, Serge

2017-07-15

Selected heavy metals and polycyclic aromatic hydrocarbons (PAHs) were determined in marine sediment from 28 sites Djibouti city. The concentrations of trace elements varied from 0 to 288.1mg/kg with relative abundance of trace metals in sediments was in the order of Zn>Cu>Ni>Cr>Co>Pb>Cd. Zn, Cu and Ni exceeded consensus based sediment quality guideline values 7, 14, 15 sites respectively. Enrichment factor and pollution load index showed relatively low to moderate contamination. The concentrations of total 16 PAHs varied widely depending on the sample location and ranged from 2.65 to 3760.11ng·g -1 , with the mean concentration value of 387.87ng·g -1 . Compositions and relative abundance of individual PAH using molecular diagnostic ratio using congener's m/z 178 and 202 indicated pyrolytic origin and reflecting a petroleum combustion, grass/wood and coal combustion and a petrogenic source. This study represents the first pollution baseline and a reference for future studies in Djibouti. Copyright © 2017 Elsevier Ltd. All rights reserved.

Sequential extraction techniques applied to a porphyry copper deposit in the basin and range province

USGS Publications Warehouse

Filipek, L.H.; Theobald, P.K.

1981-01-01

Samples of minus-80-mesh (<180 ??m) stream sediment, rock containing exposed fracture coatings, and jarosite and chrysocolla were collected from an area surrounding the North Silver Bell porphyry Cu deposit near Tucson, Arizona. The samples were subjected to a series of extractions in a scheme originally designed for use on samples from humid or sub-humid environments, in which the following fractions can effectively be separated: (1) carbonates and exchangeable metals; (2) Mn oxides; (3) organic compounds and sulfides; (4) hydrous Fe oxides; and (5) residual crystalline minerals. Jarosite and chrysocolla, two major minerals of the North Silver Bell area, were found to dissolve over two or more steps of the extraction scheme. The results represent only a limited number of samples from one copper deposit. Nevertheless, they do suggest that in a semiarid to arid environment, where mechanical dispersion of such minerals predominates, uncritical assignment of unique phases, such as Mn oxides or organics to a given extraction would lead to false interpretations of weathering processes. However, the relative proportions of elements dissolved in each step of the jarosite and chrysocolla extractions could be used as a "fingerprint" for recognition of the presence of these two minerals in the stream-sediment and rock samples. The relative abundance of hydrous Fe oxide and jarosite and the alteration zoning could be mapped using data from jarosite and chrysocolla extractions. Manganese oxides were also found to have a greater influence on Zn than on Cu or Pb during supergene alteration. The rapid change in relative importance of the first (1M-acetic acid) extraction for Cu, Zn, and Pb near the mineralized zone suggested the occurrence of minor hydromorphic processes within the stream sediments. Thus, the acetic acid extraction proved the most effective for pinpointing mineralization in sediments. In contrast, the residual fraction had the longest dispersion train, suggesting that total metal concentrations are most effective in arid environments for reconnaissance surveys. ?? 1981.

Late Holocene environmental changes in a mesotidal estuary from Patagonia, Argentina

NASA Astrophysics Data System (ADS)

Espinosa, Marcela; Escandell, Alejandra; Velez Agudelo, Camilo

2016-04-01

Two sediment records from the lower valley of Negro River, Patagonia, Argentina (41°01´S; 62°47'W) spanning for the last 2000 cal yrs BP were analyzed according to diatoms and sediments contents. The river originates at the junction of the Neuquén and the Limay Rivers, Northern Patagonia, and discharges more than 1000 m3/s to the South Atlantic Ocean. Mesotidal conditions dominate at the inlet (2.95 m) affecting the lower valley (about 20 km) where salinity decreases drastically in the last 2 km. Fossil diatom assemblages and grain size were studied from two cores located at 1.5 km (Villarino site) and 12 km (Criadero site) from the inlet. Samples for modern diatom analyses were collected from the littoral zone at eleven sites along the river. Physical and chemical variables were quantified representing the maximum heterogeneity along the aquatic environment. Turbidity, salinity, conductivity, pH and temperature data were obtained in situ during summer and winter. In addition, a surface sediment sample was taken for grain size analysis and organic matter content, and water samples were taken to analyze nutrients and major ions following standard methods. The diatom content of modern sediment samples were studied in order to achieve ecological information useful as modern analogous for Patagonian rivers. Diatom zones were characterized by constrained incremental sum of squares cluster analysis (single linkage, Euclidean distance) in the fossil sequences. Fossil and modern diatom assemblages were compared with Detrended Correspondence Analysis (DCA). A total of 77 samples (modern and fossils) were analyzed and more than 200 taxa were identified. Diatom assemblages showed distinct abundance patterns in relation to salinity with a shift from communities dominated by marine/brackish taxa in lower sites to communities dominated by freshwater taxa in the middle and upper course of the river. The record of Criadero core (12 km from the inlet) began 2000 cal yrs BP with a shallow vegetated brackish/freshwater environment represented by Surirella brebissonii, Epithemia adnata and Rhopalodia gibba. The environment evolved gradually into marine conditions with dominance of Paralia sulcata, Delphineis surirella, Raphoneis amphiceros and Cymatosira belgica (tidal channel). Finally, marine brackish aerophilous taxa indicate the development of a saltmarsh. Villarino core (1.5 km from the inlet) represents the infilling of the estuary during the last 1300 cal yrs BP with the dominance of the marine/brackish tychoplankton taxa Paralia sulcata. The fossil assemblages of the two studied sequences showed similarity with modern assemblages of the lower valley of the river. Considering the strong influence of salinity changes on diatom assemblages, tidal effects are the main controlling factor for the composition and distribution of diatoms along mesotidal estuaries from Patagonia. The knowledge of palaeoenvironmental conditions derived from fossil diatom assemblages is very important to infer man-made changes in coastal areas and can be used as reference for the assessment of recent coastal changes (dredging, harbour construction, flood control improvements, pollution).

Geomorphological and cryostratigraphical analyses of the Zackenberg Valley, NE Greenland and significance of Holocene alluvial fans

NASA Astrophysics Data System (ADS)

Cable, Stefanie; Christiansen, Hanne H.; Westergaard-Nielsen, Andreas; Kroon, Aart; Elberling, Bo

2018-02-01

In High Arctic northern Greenland, future responses to climatic changes are poorly understood on a landscape scale. Here, we present a study of the geomorphology and cryostratigraphy in the Zackenberg Valley in NE Greenland (74°N) containing a geomorphological map and a simplified geocryological map, combined with analyses of 13 permafrost cores and two exposures. Cores from a solifluction sheet, alluvial fans, and an emerged delta were studied with regards to cryostructures, ice and total carbon contents, grain size distribution, and pore water electrical conductivity; and the samples were AMS 14C dated. The near-surface permafrost on slopes and alluvial fans is ice rich, as opposed to the ice-poor epigenetic permafrost in the emerged delta. Ground ice and carbon distribution are closely linked to sediment transport processes, which largely depend on lithology and topography. Holocene alluvial fans on the lowermost hillslopes, covering 12% of the study area, represent paleoenvironmental archives. During the contrasting climates of the Holocene, the alluvial fans continued to aggrade - through the warmer early Holocene Optimum, the colder late Holocene, and the following climate warming - and by 0.45 mm a- 1, on average. This is caused by three factors: sedimentation, ground ice aggradation, and vegetation growth and is reflected by AMS 14C dating and continuously alternating cryostructures. Highly variable sedimentation rates in space and time at the alluvial fans have been detected. This is also reflected by alternating lenticular and microlenticular cryostructures indicating syngenetic permafrost aggradation during sedimentation with suspended and organic-matrix cryostructures indicating quasi-syngenetic permafrost aggradation in response to vegetation growth in periods with reduced or no sedimentation. Over time, this causes organic matter to become buried, indicating that alluvial fans represent effective carbon sinks that have previously been overlooked.

The occurrence of trace elements in bed sediment collected from areas of varying land use and potential effects on stream macroinvertebrates in the conterminous western United States, Alaska, and Hawaii, 1992-2000

USGS Publications Warehouse

Paul, Angela P.; Paretti, Nicholas V.; MacCoy, Dorene E.; Brasher, Anne M.D.

2012-01-01

As part of the National Water-Quality Assessment Program of the U.S. Geological Survey, this study examines the occurrence of nine trace elements in bed sediment of varying mineralogy and land use and assesses the possible effects of these trace elements on aquatic-macroinvertebrate community structure. Samples of bed sediment and macroinvertebrates were collected from 154 streams at sites representative of undeveloped, agricultural, urban, mined, or mixed land-use areas and 12 intermediate-scale ecoregions within the conterminous western United States, Alaska, and Hawaii from 1992 to 2000. The nine trace elements evaluated during this study—arsenic (As), cadmium (Cd), chromium (Cr), copper (Cu), lead (Pb), mercury (Hg), nickel (Ni), selenium (Se), and zinc (Zn)—were selected on the basis of potential ecologic significance and availability of sediment-quality guidelines. At most sites, the occurrence of these trace elements in bed sediment was at concentrations consistent with natural geochemical abundance, and the lowest concentrations were in bed-sediment samples collected from streams in undeveloped and agricultural areas. With the exception of Zn at sampling sites influenced by historic mining-related activities, median concentrations of all nine trace elements in bed sediment collected from sites representative of the five general land-use areas were below concentrations predicted to be harmful to aquatic macroinvertebrates. The highest concentrations of As, Cd, Pb, and Zn were in bed sediment collected from mined areas. Median concentrations of Cu and Ni in bed sediment were similarly enriched in areas of mining, urban, and mixed land use. Concentrations of Cr and Ni appear to originate largely from geologic sources, especially in the western coastal states (California, Oregon, and Washington), Alaska, and Hawaii. In these areas, naturally high concentrations of Cr and Ni can exceed concentrations that may adversely affect aquatic macroinvertebrates. Generally, Hg concentrations were below the sediment-quality guideline for this trace element but appeared elevated in urbanized areas and at sites contaminated by historic mining practices. Lastly, although there was no distinctive pattern in Se concentrations with land use, median bed-sediment concentrations were slightly elevated in urbanized areas.Macroinvertebrate community structure was influenced by topographic, geologic, climatic, and in-stream characteristics. To account for inherent distribution patterns resulting from these influences, samples of macroinvertebrates were stratified by ecoregion to assess the influence of trace elements on community structure. Cumulative toxic units (CTUs) were used to evaluate gradients in trace-element concentrations in mixture. Correlation analyses among the trace elements under different land-use conditions indicate that trace-element mixtures vary among bed sediment and can have a marked influence on CTU composition. Macroinvertebrate response to bed-sediment trace-element exposure was evident only at the most highly contaminated sites, notably at sites classified as contaminated by the Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) as a result of historic mining activities. Results of this study agree with the findings of other studies evaluating trace-element exposure to in-stream macroinvertebrate community structure in that generally lower richness metrics and taxa dominance occur in streams where high trace-element enrichment occurs; however, not all streams in all areas have the same characterizing taxa. In the mountain and xeric ecosystems, the mayfly, Baetis sp.; the Diptera, Simulium sp.; caddisflies in the family Hydropsychiidae; midges in the family Orthocladiinae; and the worms belonging to Turbellaria and Naididae all demonstrated resilience to trace-element exposure and, in some cases, possible changes in physical habitat within stream ecosystems. The taxa characteristics within the Ozark Highland ecoregion were different than other ecoregions as evidenced by generally more diverse mayfly populations. In addition, Baetis sp. was common and dominated many of the mayfly populations found in the Rocky Mountain streams within the Mountain Southern Rockies and Mountain Northern Rockies ecoregions; however, within the Ozark Highland ecoregion, Tricorythodes sp. appeared to be more common than Baetis sp.

Sedimentation in mountain streams: A review of methods of measurement

USGS Publications Warehouse

Hedrick, Lara B.; Anderson, James T.; Welsh, Stuart A.; Lin, Lian-Shin

2013-01-01

The goal of this review paper is to provide a list of methods and devices used to measure sediment accumulation in wadeable streams dominated by cobble and gravel substrate. Quantitative measures of stream sedimentation are useful to monitor and study anthropogenic impacts on stream biota, and stream sedimentation is measurable with multiple sampling methods. Evaluation of sedimentation can be made by measuring the concentration of suspended sediment, or turbidity, and by determining the amount of deposited sediment, or sedimentation on the streambed. Measurements of deposited sediments are more time consuming and labor intensive than measurements of suspended sediments. Traditional techniques for characterizing sediment composition in streams include core sampling, the shovel method, visual estimation along transects, and sediment traps. This paper provides a comprehensive review of methodology, devices that can be used, and techniques for processing and analyzing samples collected to aid researchers in choosing study design and equipment.

Effects of fluvial processes in different order river valleys on redistribution and storage of particle-bound radioactive caesium-137 in area of significant Chernobyl fallout and impact on linked rivers with lower contamination levels

NASA Astrophysics Data System (ADS)

Belyaev, Vladimir; Golosov, Valentin; Shamshurina, Evgeniya; Ivanov, Maxim; Ivanova, Nadezhda; Bezukhov, Dmitry; Onda, Yuichi; Wakiyama, Yoshifumi; Evrard, Olivier

2015-04-01

Detailed investigations of the post-fallout fate of radionuclide contamination represent an important task in terms of environmental quality assessment. In addition, particle-bound radionuclides such as the most widespread anthropogenic isotope caesium-137 can be used as tracers for quantitative assessment of different sediment redistribution processes. In landscapes of humid plains with agriculture-dominated land use the post-fallout redistribution of caesium-137 is primarily associated with fluvial activity of various scales in cascade systems starting from soil erosion on cultivated hillslopes through gully and small dry valley network into different order perennial streams and rivers. Our investigations in the so-called Plavsk hotspot (area of very high Chernobyl caesium-137 contamination within the Plava River basin, Tula Region, Central European Russia) has been continuing for more than 15 years by now, while the time passed since the Chernobyl disaster and associated radioactive fallout (1986) is almost 29 years. Detailed information on the fluvial sediment and associated caesium-137 redistribution has been obtained for case study sites of different size from individual cultivated slopes and small catchments of different size (2-180 km2) to the entire Plava River basin scale (1856 km2). It has been shown that most of the contaminated sediment over the time passed since the fallout has remained stored within the small dry valleys of the 1-4 Hortonian order and local reservoirs (>70%), while only about 5% reached the 5-6 order valleys (main tributaries of the Plava River) and storage of the Plava floodplain itself represents as low as 0.3% of the basin-scale total sediment production from eroded cultivated hillslopes. Nevertheless, it has been shown that contaminated sediment yield from the Plava River basin exerts significant influence on less polluted downstream-linked river system. Recent progress of the investigations involved sampling of 7 detailed depth-incremental floodplain sediment sections along the Upa River valley, which is the receiving river for the Plava and is characterized by generally much lower caesium-137 contamination within other parts of its basin. One of the sampled sections was located several kilometers upstream from the Plava River mouth and the other 6 - at different distances downstream starting from about 2 km to about 40 km. In this case we can assume the Plava River mouth to be the point-source of sediment-associated radioactive contamination additional to the initial fallout. It has been found that while at the nearest point downstream the floodplain sediment contamination by caesium-137 is about 2 order of magnitude higher, than upstream, it decreases quickly along the Upa River valley two about 3 times higher than upstream at the most remote downstream point. Importantly, the decrease is not represented by gradual and uniform curve. In contrast, it is interrupted by local increase caused by smaller tributary from relatively high contamination area. It is believed that the obtained information on decadal-scale sediment and associated post-fallout caesium-137 redistribution through the fluvial network, patterns of sinks and rate of contamination propagation into the less polluted downstream-linked river basin can be used for testing and improving the predictive models being developed for applications in other contaminated areas such as river basins around the Fukushima Daiichi nuclear power plant, providing that differences in landscape settings, hydrological regime and land use patterns are taken into account.

Diversity of Ktedonobacteria with Actinomycetes-Like Morphology in Terrestrial Environments

PubMed Central

Yabe, Shuhei; Sakai, Yasuteru; Abe, Keietsu; Yokota, Akira

2017-01-01

Bacteria with an actinomycetes-like morphology have recently been discovered, and the class Ktedonobacteria was created for these bacteria in the phylum Chloroflexi. They may prove to be a valuable resource with the potential to produce unprecedented secondary metabolites. However, our understanding of their diversity, richness, habitat, and ecological significance is very limited. We herein developed a 16S rRNA gene-targeted, Ktedonobacteria-specific primer and analyzed ktedonobacterial amplicons. We investigated abundance, diversity, and community structure in forest and garden soils, sand, bark, geothermal sediment, and compost. Forest soils had the highest diversity among the samples tested (1181–2934 operational taxonomic units [OTUs]; Chao 1 estimate, 2503–5613; Shannon index, 4.21–6.42). A phylogenetic analysis of representative OTUs revealed at least eight groups within unclassified Ktedonobacterales, expanding the known diversity of this order. Ktedonobacterial communities markedly varied among our samples. The common mesic environments (soil, sand, and bark) were dominated by diverse phylotypes within the eight groups. In contrast, compost and geothermal sediment samples were dominated by known ktedonobacterial families (Thermosporotrichaceae and Thermogemmatisporaceae, respectively). The relative abundance of Ktedonobacteria in the communities, based on universal primers, was ≤0.8%, but was 12.9% in the geothermal sediment. These results suggest that unknown diverse Ktedonobacteria inhabit common environments including forests, gardens, and sand at low abundances, as well as extreme environments such as geothermal areas. PMID:28321007

Sound absorption by suspensions of nonspherical particles: Measurements compared with predictions using various particle sizing techniques

NASA Astrophysics Data System (ADS)

Richards, Simon D.; Leighton, Timothy G.; Brown, Niven R.

2003-10-01

Knowledge of the particle size distribution is required in order to predict ultrasonic absorption in polydisperse particulate suspensions. This paper shows that the method used to measure the particle size distribution can lead to important differences in the predicted absorption. A reverberation technique developed for measuring ultrasonic absorption by suspended particles is used to measure the absorption in suspensions of nonspherical particles. Two types of particulates are studied: (i) kaolin (china clay) particles which are platelike in form; and (ii) calcium carbonate particles which are more granular. Results are compared to theoretical predictions of visco-inertial absorption by suspensions of spherical particles. The particle size distributions, which are required for these predictions, are measured by laser diffraction, gravitational sedimentation and centrifugal sedimentation, all of which assume spherical particles. For a given sample, each sizing technique yields a different size distribution, leading to differences in the predicted absorption. The particle size distributions obtained by gravitational and centrifugal sedimentation are reinterpreted to yield a representative size distribution of oblate spheroids, and predictions for absorption by these spheroids are compared with the measurements. Good agreement between theory and measurement for the flat kaolin particles is obtained, demonstrating that these particles can be adequately represented by oblate spheroids.

Relationship between compressional-wave velocity and porosity of sediments along subduction plate interface

NASA Astrophysics Data System (ADS)

Yamaguchi, M.; Hashimoto, Y.

2012-12-01

Evolution of physical properties of sediments along subduction interface has effects on wedge strength, wedge geometry, dewatering and dehydration processes, and seismic behavior. Sediments have initially more than 70% of porosity prior to subduction. Through underthrusting and accretion, porosity of sediments decreases by compaction and cementation to be lithified sediments. The purpose of this study is to understand evolution of physical properties from a state before subduction to a state within a wedge using a relationship between compressional-wave velocity and porosity. In this study, we obtained new data for sediments from a reference site in IODP NanTroSEIZE, Expedition 333. In addition to that, we have complied velocity-porosity relationships for the samples and also for previous studies from NanTroSEIZE (off Kumano) (Hashimoto et al., 2010, 2011), ODP Leg 190 (off Shikoku) (Hoffman and Tobin, 2004) and ODP Leg 170 (off Costa Rica) (Gettemy and Tobin, 2003). Velocity measurement procedure in this study to obtain new data is as following: Two pumps were used to control pore fluid pressure and confining pressure. The pore pressure of 1000kPa was kept under drained conditions. Confining (effective) pressure was increased stepwise in the measurements. Velocity measurements were conducted under isotropic pressure conditions. Confining pressure was pressurized in tens seconds and kept for more than 8 hours for next step to obtain equilibrium conditions between effective pressure and sediments strain. Lead zirconate titanate (PZT) shear wave transducers (500kHz) were used in a source-receiver pair to measure wave speed. Porosity and P-wave velocity ranges about 27 - 75% and 1.4 - 2.2 km/s in this study, respectively. In the comparison in Vp-porosity relationships between sedimetns from reference sites and others, sediments were classified into two, simply compacted sediments (reference site and slope sediments) and wedge sediments. Different trends in Vp-porosity relationships were observed for the classified sediments. For compacted sediments, Vp-porosity relationships are along the global empirical relationships (Erickson and Jarrard 1988) and almost within the area between normal and highly compaction curves. On the other hand, some of Vp-porosity relationships for wedge sediments represent trends with higher velocity at a porosity. Such trend was observed for wedge sediments from Site C0001 and C0004. Those higher Vp trend in Vp-porosity relationship for wedge sediments can be explained by shear strain of sediments and/or cementation. Even though the velocity measurements was conducted under hydrostatic condition, we examined the void ratio-porosity curve as a kind of compaction curve. On the basis of the curves, break points were observed at the pressure which corresponds to the effective pressure assuming the hydrostatic pore fluid pressure. The result suggests that the sediments were under condition of normal compaction. Some of void ratio-porosity curve represent a evidence of weak cement which can correspond with anomaly in porosity-depth curve in the shallow portion of the reference sites.

Chlorinated and polycyclic aromatic hydrocarbons in riverine and estuarine sediments from Pearl River Delta, China.

PubMed

Mai, Bi-Xian; Fu, Jia-Mo; Sheng, Guo-Ying; Kang, Yue-Hui; Lin, Zheng; Zhang, Gan; Min, Yu-Shuan; Zeng, Eddy Y

2002-01-01

Spatial distribution of chlorinated hydrocarbons [chlorinated pesticides (CPs) and polychlorinated biphenyls (PCBs)] and polycyclic aromatic hydrocarbons (PAHs) was measured in riverine and estuarine sediment samples from Pearl River Delta, China, collected in 1997. Concentrations of CPs of the riverine sediment samples range from 12 to 158 ng/g, dry weight, while those of PCBs range from 11 to 486 ng/g. The CPs concentrations of the estuarine sediment samples are in the range 6-1658 ng/g, while concentrations of PCBs are in the range 10-339 ng/g. Total PAH concentration ranges from 1168 to 21,329 ng/g in the riverine sediment samples, whereas the PAH concentration ranges from 323 to 14,812 ng/g in the sediment samples of the Estuary. Sediment samples of the Zhujiang River and Macao harbor around the Estuary show the highest concentrations of CPs, PCBs, and PAHs. Possible factors affecting the distribution patterns are also discussed based on the usage history of the chemicals, hydrologic condition, and land erosion due to urbanization processes. The composition of PAHs is investigated and used to assess petrogenic, combustion and naturally derived PAHs of the sediment samples of the Pearl River Delta. In addition, the concentrations of a number of organic compounds of the Pearl River Delta samples indicate that sediments of the Zhujiang river and Macao harbor are most likely to pose biological impairment.

Occurrence and behavior of butyltins in intertidal and shallow subtidal surface sediments of an estuarine beach under different sampling conditions

NASA Astrophysics Data System (ADS)

Santos, Dayana Moscardi dos; Sant'Anna, Bruno Sampaio; Sandron, Daniela Corsino; Cardoso de Souza, Sara; Cristale, Joyce; Marchi, Mary Rosa Rodrigues de; Turra, Alexander

2010-07-01

Contamination by butyltin compounds (BTs) has been reported in estuarine environments worldwide, with serious impacts on the biota of these areas. Considering that BTs can be degraded by varying environmental conditions such as incident light and salinity, the short-term variations in such factors may lead to inaccurate estimates of BTs concentrations in nature. Therefore, the present study aimed to evaluate the possibility that measurements of BTs in estuarine sediments are influenced by different sampling conditions, including period of the day (day or night), tidal zone (intertidal or subtidal), and tides (high or low). The study area is located on the Brazilian southeastern coast, São Vicente Estuary, at Pescadores Beach, where BT contamination was previously detected. Three replicate samples of surface sediment were collected randomly in each combination of period of the day, tidal zone, and tide condition, from three subareas along the beach, totaling 72 samples. BTs were analyzed by GC-PFPD using a tin filter and a VF-5 column, by means of a validated method. The concentrations of tributyltin (TBT), dibutyltin (DBT), and monobutyltin (MBT) ranged from undetectable to 161 ng Sn g -1 (d.w.). In most samples (71%), only MBT was quantifiable, whereas TBTs were measured in only 14, suggesting either an old contamination or rapid degradation processes. DBT was found in 27 samples, but could be quantified in only one. MBT concentrations did not differ significantly with time of day, zones, or tide conditions. DBT and TBT could not be compared under all these environmental conditions, because only a few samples were above the quantification limit. Pooled samples of TBT did not reveal any difference between day and night. These results indicated that, in assessing contamination by butyltin compounds, surface-sediment samples can be collected in any environmental conditions. However, the wide variation of BTs concentrations in the study area, i.e., over a very small geographic scale, illustrates the need for representative hierarchical and composite sampling designs that are compatible with the multiscalar temporal and spatial variability common to most marine systems. The use of such sampling designs will be necessary for future attempts to quantitatively evaluate and monitor the occurrence and impact of these compounds in nature.

Greenstone belts: Their boundaries, surrounding rock terrains and interrelationships

NASA Technical Reports Server (NTRS)

Percival, J. A.; Card, K. D.

1986-01-01

Greenstone belts are an important part of the fragmented record of crustal evolution, representing samples of the magmatic activity that formed much of the Earth's crust. Most belts developed rapidly, in less than 100 Ma, leaving large gaps in the geological record. Surrounding terrains provide information on the context of greenstone belts. The effects of tectonic setting, structural geometry and evolution, associated plutonic activity and sedimentation are discussed.

Impacts of variability in geomechanical properties on hydrate bearing sediment responses

NASA Astrophysics Data System (ADS)

Lin, J. S.; Uchida, S.; Choi, J. H.; Seol, Y.

2017-12-01

Hydrate bearing sediments (HBS) may become unstable during the gas production operation, or from natural processes such as change in the landform or temperature. The geomechanical modeling is a rational way to assess HBS stability regardless of the process involved. At the present time, such modeling is laced with uncertainties. The uncertainties come from many sources that include the adequacy of a modeling framework to accurately project the response of HBS, the gap in the available field information, and the variability in the laboratory test results from limited samples. For a reasonable stability assessment, the impact of the various uncertainties have to be addressed. This study looks into one particular aspect of the uncertainty, namely, the uncertainty caused by the scatter in the laboratory tests and the ability of a constitutive model to adequately represent them. Specifically this study focuses on the scatter in the results from laboratory tests on high quality pressured core samples from a marine site, and use a critical state constitutive model to represent them. The study investigates how the HBS responses shift when the parameters of the constitutive model are varied to reflect the different aspects of experimental results. Also investigated are impacts on the responses by altering certain formulations of the constitutive model to suit particular sets of results.

Flocculation characteristics of freshly eroded aggregates

NASA Astrophysics Data System (ADS)

Manning, Andrew; Wendling, Valentin; Gratiot, Nicolas; Legout, Cedric; Michallet, Herve

2014-05-01

In Europe, 260,000 square kms of soils already suffer erosion by water. This worrying level of land degradation is expected to increase in the context of climate change, with situations particularly critical in mountainous environments. This study aims at improving sediment transport parameterisation, by examining the kinetics of fine soil aggregates (size D, settling velocity Ws, density), once immersed in a turbulent flow. Thus observing the changing state, as soil aggregates become suspended sediment floc/aggregates. Particle properties of two Mediterranean materials (black marl and molasse, both sampled in badlands) were tested in grid stirred experiments. Hydrodynamic properties were monitored with ADV and turbidity sensors. For each soil, three suspended sediment concentration (SSC) loads (1.5; 5; 10 g/l) representative of flood conditions were tested. Aggregate properties were obtained at four depths above the grid, using the video LabSFLOC technique and laser techniques. These acquisition heights are associated with the corresponding turbulence dissipation rates G of 1.5, 3, 7 and 19 s^-1. Once particles were injected in the tank, a quasi-equilibrium state was rapidly reached, after one to two minutes. The floc/aggregate properties did not vary with sediment load. The median diameter D_50 was measured to be around 60 microns for the clay loam soil and around 15 microns for the two badlands materials. Examining the molasse samples, we see that the SSC at 1, 5, 10, 20 and 40 minute intervals were all +12 g/l at distances 10 cm and 15 cm above the nominal vertical mid-stroke grid position for the experimental SSC ranges. At the less turbulent zone, a 2 g/l base SSC reduced by 80% and at a nominal 10 g/l the SSC dipped by two orders of magnitude from the base concentration. If we consider the population distribution for molasse at a base SSC of 10 g/l sampled 15cm above the grid after 40 minutes, D ranged from 39 - 273 microns. A small microfloc cluster only had Ws of 0.4-0.5 mm/s, an order of magnitude slower than the peak sample Ws of 5.8 mm/s. These fast settling aggregates spanned the macrofloc (> 160 microns) and microfloc transition from 100-220 microns, representing over half the SSC. The majority of the microflocs (< 160 microns) exhibited effective densities between 160-1600 kg/m^-3, which suggests that some degree of flocculation has occurred. Furthermore, there are highly porous macroflocs demonstrating effective densities < 40 kg/m^-3; these flocs fell at a Ws of about 1 mm/s and represented ~4% of the total SSC. A key fundamental research question to be addressed in this study was: do aggregates rapidly turn into flocs? The initial results indicate that aggregates do not easily/rapidly turn into flocs. However, despite their poor kinetics, particles were undoubtedly aggregated. The aggregation index was measured to be of 50% for badlands materials. The behaviour of the soils differ significantly from those observed for estuarine muds, floc size and settling velocity increases with suspended sediment concentration, where as the soils tested did not.

Analytical and sampling constraints in ²¹⁰Pb dating.

PubMed

MacKenzie, A B; Hardie, S M L; Farmer, J G; Eades, L J; Pulford, I D

2011-03-01

²¹⁰Pb dating provides a valuable, widely used means of establishing recent chronologies for sediments and other accumulating natural deposits. The Constant Rate of Supply (CRS) model is the most versatile and widely used method for establishing ²¹⁰Pb chronologies but, when using this model, care must be taken to account for limitations imposed by sampling and analytical factors. In particular, incompatibility of finite values for empirical data, which are constrained by detection limit and core length, with terms in the age calculation, which represent integrations to infinity, can generate erroneously old ages for deeper sections of cores. The bias in calculated ages increases with poorer limit of detection and the magnitude of the disparity increases with age. The origin and magnitude of this effect are considered below, firstly for an idealized, theoretical ²¹⁰Pb profile and secondly for a freshwater lake sediment core. A brief consideration is presented of the implications of this potential artefact for sampling and analysis. Copyright © 2011 Elsevier B.V. All rights reserved.

Identification of a potential toxic hot spot associated with AVS spatial and seasonal variation.

PubMed

Campana, O; Rodríguez, A; Blasco, J

2009-04-01

In risk assessment of aquatic sediments, much attention is paid to the difference between acid-volatile sulfide (AVS) and simultaneously extracted metals (SEMs) as indicators of metal availability. Ten representative sampling sites were selected along the estuary of the Guadalete River. Surficial sediments were sampled in winter and summer to better understand SEM and AVS spatial and seasonal distributions and to establish priority risk areas. Total SEM concentration (SigmaSEM) ranged from 0.3 to 4.7 micromol g(-1). It was not significantly different between seasons, however, it showed a significant difference between sampling stations. AVS concentrations were much more variable, showing significant spatial and temporal variations. The values ranged from 0.8 to 22.4 micromol g(-1). The SEM/AVS ratio was found to be <1 at all except one station located near the mouth of the estuary. The results provided information on a potential pollution source near the mouth of the estuary, probably associated with vessel-related activities carried out in a local harbor area located near the station.

Guidelines and Procedures for Computing Time-Series Suspended-Sediment Concentrations and Loads from In-Stream Turbidity-Sensor and Streamflow Data

USGS Publications Warehouse

Rasmussen, Patrick P.; Gray, John R.; Glysson, G. Douglas; Ziegler, Andrew C.

2009-01-01

In-stream continuous turbidity and streamflow data, calibrated with measured suspended-sediment concentration data, can be used to compute a time series of suspended-sediment concentration and load at a stream site. Development of a simple linear (ordinary least squares) regression model for computing suspended-sediment concentrations from instantaneous turbidity data is the first step in the computation process. If the model standard percentage error (MSPE) of the simple linear regression model meets a minimum criterion, this model should be used to compute a time series of suspended-sediment concentrations. Otherwise, a multiple linear regression model using paired instantaneous turbidity and streamflow data is developed and compared to the simple regression model. If the inclusion of the streamflow variable proves to be statistically significant and the uncertainty associated with the multiple regression model results in an improvement over that for the simple linear model, the turbidity-streamflow multiple linear regression model should be used to compute a suspended-sediment concentration time series. The computed concentration time series is subsequently used with its paired streamflow time series to compute suspended-sediment loads by standard U.S. Geological Survey techniques. Once an acceptable regression model is developed, it can be used to compute suspended-sediment concentration beyond the period of record used in model development with proper ongoing collection and analysis of calibration samples. Regression models to compute suspended-sediment concentrations are generally site specific and should never be considered static, but they represent a set period in a continually dynamic system in which additional data will help verify any change in sediment load, type, and source.

Source identification of petroleum hydrocarbons in soil and sediments from Iguaçu River Watershed, Paraná, Brazil using the CHEMSIC method (CHEMometric analysis of Selected Ion Chromatograms).

PubMed

Gallotta, Fabiana D C; Christensen, Jan H

2012-04-27

A chemometric method based on principal component analysis (PCA) of pre-processed and combined sections of selected ion chromatograms (SICs) is used to characterise the hydrocarbon profiles in soil and sediment from Araucária, Guajuvira, General Lúcio and Balsa Nova Municipalities (Iguaçu River Watershed, Paraná, Brazil) and to indicate the main sources of hydrocarbon pollution. The study includes 38 SICs of polycyclic aromatic compounds (PACs) and four of petroleum biomarkers in two separate analyses. The most contaminated samples are inside the Presidente Getúlio Vargas Refinery area. These samples represent a petrogenic pattern and different weathering degrees. Samples from outside the refinery area are either less or not contaminated, or contain mixtures of diagenetic, pyrogenic and petrogenic inputs where different proportions predominate. The locations farthest away from industrial activity (Balsa Nova) contains the lowest levels of PAC contamination. There are no evidences to conclude positive matches between the samples from outside the refinery area and the Cusiana spilled oil. Copyright © 2012 Elsevier B.V. All rights reserved.

Regional Geochemical Results from the Reanalysis of NURE Stream Sediment Samples - Eagle 3? Quadrangle, East-Central Alaska

USGS Publications Warehouse

Crock, J.G.; Briggs, P.H.; Gough, L.P.; Wanty, R.B.; Brown, Z.A.

2007-01-01

This report presents reconnaissance geochemical data for a cooperative study in the Fortymile Mining District, east-central Alaska, initiated in 1997. This study has been funded by the U.S. Geological Survey (USGS) Mineral Resources Program. Cooperative funds were provided from various State of Alaska sources through the Alaska Department of Natural Resources. Results presented here represent the initial reconnaissance phase for this multidisciplinary cooperative study. In this phase, 239 sediment samples from the Eagle 3? Quadrangle of east-central Alaska, which had been collected and analyzed for the U.S. Department of Energy's National Uranium Resource Evaluation program (NURE) of the 1970's (Hoffman and Buttleman, 1996; Smith, 1997), are reanalyzed by newer analytical methods that are more sensitive, accurate, and precise (Arbogast, 1996; Taggart, 2002). The main objectives for the reanalysis of these samples were to establish lower limits of determination for some elements and to confirm the NURE data as a reliable predictive reconnaissance tool for future studies in Alaska's Eagle 3? Quadrangle. This study has wide implications for using the archived NURE samples and data throughout Alaska for future studies.

Anthropogenic radionuclide fluxes and distribution in bottom sediments of the cooling basin of the Ignalina Nuclear Power Plant.

PubMed

Marčiulionienė, D; Mažeika, J; Lukšienė, B; Jefanova, O; Mikalauskienė, R; Paškauskas, R

2015-07-01

Based on γ-ray emitting artificial radionuclide spectrometric measurements, an assessment of areal and vertical distribution of (137)Cs, (60)Co and (54)Mn activity concentrations in bottom sediments of Lake Drūkšiai was performed. Samples of bottom sediments from seven monitoring stations within the cooling basin were collected in 1988-1996 and 2007-2010 (in July-August). For radionuclide areal distribution analysis, samples from the surface 0-5 cm layer were used. Multi sample cores sliced 2 cm, 3 cm or 5 cm thick were used to study the vertical distribution of radionuclides. The lowest (137)Cs activity concentrations were obtained for two stations that were situated close to channels with radionuclide discharges, but with sediments that had a significantly smaller fraction of organic matter related to finest particles and consequently smaller radionuclide retention potential. The (137)Cs activity concentration was distributed quite evenly in the bottom sediments from other investigated monitoring stations. The highest (137)Cs activity concentrations in the bottom sediments of Lake Drūkšiai were measured in the period of 1988-1989; in 1990, the (137)Cs activity concentrations slightly decreased and they varied insignificantly over the investigation period. The obtained (238)Pu/(239,240)Pu activity ratio values in the bottom sediments of Lake Drūkšiai represented radioactive pollution with plutonium from nuclear weapon tests. Higher (60)Co and (54)Mn activity concentrations were observed in the monitoring stations that were close to the impact zones of the technical water outlet channel and industrial rain drainage system channel. (60)Co and (54)Mn activity concentrations in the bottom sediments of Lake Drūkšiai significantly decreased when operations at both INPP reactor units were stopped. The vertical distribution of radionuclides in bottom sediments revealed complicated sedimentation features, which may have been affected by a number of natural and anthropogenic factors resulting in mixing, resuspension and remobilization of sediments and radionuclides. The associated with particles (137)Cs flux was 129 Bq/(m(2) year). The (137)Cs transfer rate from water into bottom sediments was 14.3 year(-1) (or, the removal time was 25 days). The Kd value for (137)Cs in situ estimated from trap material was 80 m(3)/kg. The associated with particles (60)Co flux was 21 Bq/(m(2) year), when (60)Co activity concentration in sediment trap particles was 15.7 ± 5 Bq/kg. (60)Co activity concentration in soluble form was less than the minimum detectable activity (MDA = 1.3 Bq/m(3)). Then, the conservatively derived Kd value for (60)Co was >90 m(3)/kg. Copyright © 2015 Elsevier Ltd. All rights reserved.

Ecotoxicological evaluation of industrial port of Venice (Italy) sediment samples after a decontamination treatment.

PubMed

Libralato, Giovanni; Losso, Chiara; Arizzi Novelli, Alessandra; Citron, Marta; Della Sala, Stefano; Zanotto, Emanuele; Cepak, Franka; Volpi Ghirardini, Annamaria

2008-12-01

This work assesses the ecotoxicological effects of polluted sediment after a decontamination treatment process using a new sediment washing technique. Sediment samples were collected from four sites in Marghera Port industrial channels (Venice, Italy). Ecotoxicological evaluations were performed with Vibrio fischeri and Crassostrea gigas bioassays. Whole sediment and elutriate were deemed as the most suitable environmental matrices for this study. Toxicity scores developed in the Lagoon of Venice for V. fischeri on whole sediment and for C. gigas on elutriate were considered for the final ranking of samples. Ecotoxicological results showed that the treated sediment samples presented both acute and sub-chronic toxicities, which were mainly attributed to the presence of some remaining chemicals such as metals and polyaromatic hydrocarbons. The acute toxicity ranged from low to medium, while the sub-chronic one from absent to very high, suggesting that treated sediments could not be reused in direct contact with seawater.

Application of stable isotope (δ13C and δ18O) composition of mollusc shells in palaeolimnological studies - possibilities and limitations

NASA Astrophysics Data System (ADS)

Apolinarska, Karina; Pełechaty, Mariusz; Kossler, Annette; Pronin, Eugeniusz; Noskowiak, Daria

2017-04-01

Carbon (δ13C) and oxygen (δ18O) stable isotope analyses are among the standard methods applied in the studies of past environment, including climate. In lacustrine sediments, δ13C and δ18O values can be measured in fine carbonate fraction (carbonate mud), in charophyte encrustations, ostracod carapaces and mollusc shells. Application of the stable isotope record of each of the above-mentioned components of the lake sediment requires knowledge about possibilities and limitations of the method. The present research discusses the most important results of the studies carried out between 2011 and 2013, concentrated on the stable isotope composition of snail shells, primarily, the species commonly preserved in central European Quaternary lacustrine sediments. The stable isotope studies involved also, the zebra mussel (Dreissena polymorpha), one of the most invasive freshwater species in the world. The research involved shell isotope studies of both recent (Apolinarska, 2013; Apolinarska et al., 2016; Apolinarska and Pełechaty, in press) and fossil molluscs derived from the Holocene sediments (Apolinarska et al., 2015a, b). Shell δ13C values were species-specific and among the gastropods studied the same order of species from the most to the least 13C-depleted was observed at all sites sampled. Shell δ18O values were more uniform. The wide range of δ13C and δ18O values were observed in population and subpopulation, i.e. when live snails were sampled live from restricted area within the lake littoral zone. Carbon and oxygen stable isotope values of the mono-specific shells sampled from 1 cm thick sediment samples were highly variable. Those intra-specific differences (n=20) were as large as several permill. Such significant variability in δ13C and δ18O values indicates that stable isotope composition of single shells is unlikely to be representative of the sediment sample. In conclusion, samples of freshwater molluscs for stable isotope analyses should be monospecific and composed of at least several shells. The number of shells being dependent on the difference between the minimum and maximum values within the sediment layer. The research was funded by the Polish Ministry of Science and Higher Education, Iuventus Plus Program, grant No. IP2010 000670. Apolinarska, K., 2013. Stable isotope compositions of recent Dreissena polymorpha (Pallas) shells: paleoenvironmental implications. Journal of Paleolimnology 50, 353-364. Apolinarska, K., Pełechaty, M. & Kossler, A., 2015a. Within-sample variability of δ13C and δ18O values of freshwater gastropod shells and the optimum number of shells to measure per sediment layer in the Paddenluch palaeolacustrine sequence, Germany. Journal of Paleolimnology 54, 305-323. Apolinarska, K., Pełechaty, M. & Noskowiak, D., 2015b. Differences in stable isotope compositions of freshwater snails from surface sediments of two Polish shallow lakes. Limnologica 53, 95-105. Apolinarska, K., Pełechaty, M. & Pronin, E., 2016. Discrepancies between the stable isotope compositions of water, macrophyte carbonates and organics, and mollusc shells in the littoral zone of a charophyte-dominated lake (Lake Lednica, Poland). Hydrobiologia 768, 1-17. Apolinarska, K. & Pełechaty, M., Inter- and intra-specific variability in δ13C and δ18O values of freshwater gastropod shells from Lake Lednica, western Poland. DOI: 10.1515/agp-2016-0028

Geochemistry of Mercury and other trace elements in fluvial tailings upstream of Daguerre Point Dam, Yuba River, California, August 2001

USGS Publications Warehouse

Hunerlach, Michael P.; Alpers, Charles N.; Marvin-DiPasquale, Mark; Taylor, Howard E.; DeWild, John F.

2004-01-01

This study was designed to characterize the particle-size distribution and the concentrations of total mercury (HgT), methylmercury (MeHg), and other constituents in sediments trapped behind Daguerre Point Dam, a 28-foot-high structure on the lower Yuba River in California. The results of the study will assist other agencies in evaluating potential environmental impacts from mobilization of sediments if Daguerre Point Dam is modified or removed to improve the passage of anadromous fish. Methylmercury is of particular concern owing to its toxicity and propensity to bioaccumulate. A limited amount of recent work on hydraulic and dredge tailings in other watersheds has indicated that mercury and MeHg concentrations may be elevated in the fine-grained fractions of placer mining debris, particularly clay and silt. Mercury associated with tailings from placer gold mines is a source of continued contamination in Sierra Nevada watersheds and downstream water bodies, including the Sacramento?San Joaquin Delta and the San Francisco Bay of northern California. Churn drilling was used to recover sediments and heavy minerals at 5-foot intervals from six locations upstream of Daguerre Point Dam. Maximum depth of penetration ranged from 17.5 to 35 feet below land surface, resulting in 31 discreet drilled intervals. Drilling in permeable, unconsolidated sediments below the streambed of the Yuba River released a significant volume of water along with the sediment, which complicated the sampling and characterization effort. Overflow of a silty fraction sampled at the drill site contained suspended sediment consisting predominantly of silt and clay, with HgT concentration ranging from 33 to 1,100 ng/g (nanogram per gram) dry weight. A sandy fraction, collected after sieving sediment through a 2-millimeter vibratory screen, contained from 14 to 82 percent sand and 1 to 29 percent silt plus clay, and had HgT concentrations ranging from 6.8 to 81 ng/g dry weight. A clay-silt fraction, sampled from material remaining in suspension after the sandy fraction settled for 15-20 minutes, contained mercury concentrations from 23 to 370 ng/g dry weight. Concentrations of MeHg were less than the detection limit (<0.001 ng/g dry weight) in 30 of 31 samples of the sandy fraction. In the suspended clay-silt fraction, MeHg was detected in 16 of 31 samples, in which it ranged in concentration from 0.04 (estimated) to 0.61 ng/g wet weight. Potential rates of mercury methylation and demethylation were evaluated in seven samples using radiotracer methods. Mercury methylation (MeHg production) potentials were generally low, ranging from less than 0.15 to about 1.6 ng/g/d (nanogram per gram of dry sediment per day). Mercury demethylation (MeHg degradation) potentials were moderately high, ranging from 1.0 to 2.2 ng/g/d. The ratio of methylation potential (MP) to demethylation potential (DP) ranged from less than 0.14 to about 1.4 (median = 0.24, mean = 0.44, number of samples = 7), suggesting that the potential for net production of MeHg in deep sediments is generally low. The MeHg production rates and MP/DP ratios were higher in the shallower interval in two of the three holes where two depth intervals were assessed, whereas the MeHg concentrations were higher in the shallower interval for all three holes. A similar spatial distribution was found for concentrations of solid-phase sulfide (measured as total reduced sulfur and likely representing iron-sulfide and iron-disulfide compounds), which were much higher in shallower samples (about 700 to about 2,100 nanomoles per gram, dry sediment) than in deeper samples (32 to 55 nanomoles per gram, dry sediment) in these three holes. If reduced sulfur compounds are oxidized to sulfate as a consequence of sediment disturbance, the activity of sulfate-reducing bacteria might be stimulated, causing a short-term increase in methylation of inorganic Hg(II) (divalent mercury). The extent of increased Hg(II)-methylation w

Adjustable shear stress erosion and transport flume

DOEpatents

Roberts, Jesse D.; Jepsen, Richard A.

2002-01-01

A method and apparatus for measuring the total erosion rate and downstream transport of suspended and bedload sediments using an adjustable shear stress erosion and transport (ASSET) flume with a variable-depth sediment core sample. Water is forced past a variable-depth sediment core sample in a closed channel, eroding sediments, and introducing suspended and bedload sediments into the flow stream. The core sample is continuously pushed into the flow stream, while keeping the surface level with the bottom of the channel. Eroded bedload sediments are transported downstream and then gravitationally separated from the flow stream into one or more quiescent traps. The captured bedload sediments (particles and aggregates) are weighed and compared to the total mass of sediment eroded, and also to the concentration of sediments suspended in the flow stream.

Mulch effects on runoff and sediment production at the hillslope scale in the High Park Fire, Colorado

NASA Astrophysics Data System (ADS)

Wilson, C.; Kampf, S. K.; Wagenbrenner, J. W.; MacDonald, L. H.; Gleason, H.

2015-12-01

The 2012 High Park Fire (HPF) burned 330 km2 of Front Range forests surrounding the Cache la Poudre River just upstream of the municipal water supply intakes for the cities of Fort Collins and Greeley. From 2012-2014, millions of dollars were spent on mulch treatments to stabilize burned soils and protect water supplies. The objective of this research is to evaluate how runoff and sediment production vary with precipitation (P) on two unmulched and two mulched hillslopes of the HPF during the 2014 summer thunderstorm season. The four hillslopes are moderate to severely burned zero-order catchments 0.2-0.4 ha in area. Sediment fences were installed at the base of each hillslope to collect bedload sediment; each fence was fitted with a V-notch weir and a series of flow splitters to collect proportional samples of runoff and suspended sediment. Runoff and sediment were captured during 3-7 events for the unmulched sites and 1-9 events for the mulched sites; some P events that produced bedload sediment did not produce measurable runoff. The 30-minute maximum P intensity thresholds for runoff and sediment production were lower for unmulched (10 mm hr-1) than mulched hillslopes (16 mm hr-1). Runoff ratios were similar for the unmulched (0.01-0.10) and mulched sites (0.00-0.08), but total sediment yield (bedload + suspended load; Mg ha-1) for the unmulched sites was up to three times greater (0.02-1.54) than the mulched sites (0.01-0.50. The ratio of suspended sediment to bedload was similar for the unmulched (0.24-1.97) and mulched sites (0.16-2.52). The results of this research suggest that (1) bedload sediment measurements under-represent hillslope sediment production, and (2) mulching may reduce sediment production in zero-order catchments, but the magnitude of the mulch effect varies by catchment and by rain event.

Investigations of Sediment Transportation, Middle Loup River at Dunning, Nebraska: With Application of Data from Turbulence Flume

USGS Publications Warehouse

Hubbell, David Wellington; Matejka, Donald Quintin

1959-01-01

An investigation of fluvial sediments of the Middle Loup River at Dunning, Nebr., was begun in 1946 and expanded in 1949 to provide information on sediment transportation. Construction of an artificial turbulence flume at which the total sediment discharge of the Middle Loup River at Dunning, Nebr., could be measured with suspended-sediment sampling equipment was completed in 1949. Since that time. measurements have been made at the turbulence flume and at several selected sections in a reach upstream and downstream from the flume. The Middle Loup River upstream from Dunning traverses the sandhills region of north-central Nebraska and has a drainage area of approximately 1,760 square miles. The sandhills are underlain by the Ogallala formation of Tertiary age and are mantled by loess and dune sand. The topography is characterized by northwest-trending sand dunes, which are stabilized by grass cover. The valley floor upstream from Dunning is generally about half a mile wide, is about 80 feet lower than the uplands, and is composed of sand that was mostly stream deposited. The channel is defined by low banks. Bank erosion is prevalent and is the source of most of the sediment load. The flow originates mostly from ground-water accretion and varies between about 200 and 600 cfs (cubic feet per second). Measured suspended-sediment loads vary from about 200 to 2,000 tons per day, of which about 20 percent is finer than 0.062 millimeter and 100 percent is finer than 0.50 millimeter. Total sediment discharges vary from about 500 to 3,500 tons per day, of which about 10 percent is finer than 0.062 millimeter, about 90 percent is finer than 0.50 millimeter, and about 98 percent is finer than 2.0 millimeters. The measured suspended-sediment discharge in the reach near Dunning averages about one-half of the total sediment discharge as measured at the turbulence flume. This report contains information collected during the period October 1, 1948, to September 30, 1952. The information includes sediment discharges; particle-size analyses of total load, of measured suspended sediment, and of bed material; water discharges and other hydraulic data for the turbulence flume and the selected sections. Sediment discharges have been computed with several different formulas, and insofar as possible, each computed load has been compared with data from the turbulence flume. Sediment discharges computed with the Einstein procedure did not agree well, in general, with comparable measured loads. However, a satisfactory representative cross section for the reach could not be determined with the cross sections that were selected for this investigation. If the computed cross section was narrower and deeper than a representative cross section for the reach, computed loads were high; and if the computed cross section was wider and shallower than a representative cross section for the reach, computed loads were low. Total sediment discharges computed with the modified Einstein procedure compared very well with the loads of individual size ranges and the measured total loads at the turbulence flume. Sediment discharges computed with the Straub equation averaged about twice the measured total sediment discharge at the turbulence flume. Bed-load discharges computed with the Kalinske equation were of about the right magnitude; however, high computed loads were associated with low total loads, low unmeasured loads, and low concentrations of measured suspended sediment coarser than 0.125 millimeter. Bed-load discharges computed with the Schoklitsch equation seemed somewhat high; about one-third of the computed loads were slightly higher than comparable unmeasured loads. Although, in general, high computed discharges with the Schoklitsch equation were associated with high measured total loads, high unmeasured loads, and high concentrations of measured suspended sediment coarser than 0.125 millimeter, the trend was not consistent. Bed-load discharges computed

Perfluoroalkyl substances and extractable organic fluorine in surface sediments and cores from Lake Ontario.

PubMed

Yeung, Leo W Y; De Silva, Amila O; Loi, Eva I H; Marvin, Chris H; Taniyasu, Sachi; Yamashita, Nobuyoshi; Mabury, Scott A; Muir, Derek C G; Lam, Paul K S

2013-09-01

Fourteen perfluoroalkyl substances (PFASs) including short-chain perfluorocarboxylates (PFCAs, C4-C6) and perfluoroalkane sulfonates (PFSAs, C4 and C6) were measured in surface sediment samples from 26 stations collected in 2008 and sediment core samples from three stations (Niagara, Mississauga, and Rochester basins) collected in 2006 in Lake Ontario. Perfluorooctanesulfonate (PFOS), perfluorooctanoate (PFOA), perfluorononanoate (PFNA), perfluorodecanoate (PFDA), and perfluoroundecanoate (PFUnDA) were detected in all 26 surface sediment samples, whereas perfluorohexane sulfonate (PFHxS), perfluorooctane sulfonamide (FOSA), perfluorododecanoate (PFDoDA) and perfluorobutanoate (PFBA) were detected in over 70% of the surface sediment samples. PFOS was detected in all of the sediment core samples (range: 0.492-30.1ngg(-1) d.w.) over the period 1952-2005. The C8 to C11 PFCAs, FOSA, and PFBA increased in early 1970s. An overall increasing trend in sediment PFAS concentrations/fluxes from older to more recently deposited sediments was evident in the three sediment cores. The known PFCAs and PFSAs accounted for 2-44% of the anionic fraction of the extractable organic fluorine in surface sediment, suggesting that a large proportion of fluorine in this fraction remained unknown. Sediment core samples collected from Niagara basin showed an increase in unidentified organic fluorine in recent years (1995-2006). These results suggest that the use and manufacture of fluorinated organic compounds other than known PFCAs and PFSAs has diversified and increased. © 2013.

Evaluation of dredged material proposed for ocean disposal from Hackensack River Project Area, New York

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gruendell, B.D.; Barrows, E.S.; Borde, A.B.

1997-01-01

The objective of the bioassay reevaluation of the Hackensack River Federal Project was to reperform toxicity testing on proposed dredged material with current ammonia reduction protocols. Hackensack River was one of four waterways sampled and evaluated for dredging and disposal in April 1993. Sediment samples were re-collected from the Hackensack River Project area in August 1995. Tests and analyses were conducted according to the manual developed by the USACE and the U.S. Environmental Protection Agency (EPA), Evaluation of Dredged Material Proposed for Ocean Disposal (Testing Manual), commonly referred to as the {open_quotes}Green Book,{close_quotes} and the regional manual developed by themore » USACE-NYD and EPA Region II, Guidance for Performing Tests on Dredged Material to be Disposed of in Ocean Waters. The reevaluation of proposed dredged material from the Hackensack River project area consisted of benthic acute toxicity tests. Thirty-three individual sediment core samples were collected from the Hackensack River project area. Three composite sediments, representing each reach of the area proposed for dredging, were used in benthic acute toxicity testing. Benthic acute toxicity tests were performed with the amphipod Ampelisca abdita and the mysid Mysidopsis bahia. The amphipod and mysid benthic toxicity test procedures followed EPA guidance for reduction of total ammonia concentrations in test systems prior to test initiation. Statistically significant acute toxicity was found in all three Hackensack River composites in the static renewal tests with A. abdita, but not in the static tests with M. bahia. Statistically significant acute toxicity and a greater than 20% increase in mortality over the reference sediment was found in the static renewal tests with A. abdita. Statistically significant mortality 10% over reference sediment was observed in the M. bahia static tests. 5 refs., 2 figs., 2 tabs.« less

Evaluation of dredged material proposed for ocean disposal from Arthur Kill Project Area, New York

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gruendell, B.D.; Barrows, E.S.; Borde, A.B.

1997-01-01

The objective of the bioassay reevaluation of Arthur Kill Federal Project was to reperform toxicity testing on proposed dredged material following current ammonia reduction protocols. Arthur Kill was one of four waterways sampled and evaluated for dredging and disposal in April 1993. Sediment samples were recollected from the Arthur Kill Project areas in August 1995. Tests and analyses were conducted according to the manual developed by the USACE and the U.S. Environmental Protection Agency (EPA), Evaluation of Dredged Material Proposed for Ocean Disposal (Testing Manual), commonly referred to as the {open_quotes}Green Book,{close_quotes} and the regional manual developed by the USACE-NYDmore » and EPA Region II, Guidance for Performing Tests on Dredged Material to be Disposed of in Ocean Waters. The reevaluation of proposed dredged material from the Arthur Kill project areas consisted of benthic acute toxicity tests. Thirty-three individual sediment core samples were collected from the Arthur Kill project area. Three composite sediments, representing each reach of the area proposed for dredging, was used in benthic acute toxicity testing. Benthic acute toxicity tests were performed with the amphipod Ampelisca abdita and the mysid Mysidopsis bahia. The amphipod and mysid benthic toxicity test procedures followed EPA guidance for reduction of total ammonia concentrations in test systems prior to test initiation. Statistically significant acute toxicity was found in all Arthur Kill composites in the static renewal tests with A. abdita, but not in the static tests with M. bahia. Statistically significant acute toxicity and a greater than 20% increase in mortality over the reference sediment was found in the static renewal tests with A. abdita. M. bahia did not show statistically significant acute toxicity or a greater than 10% increase in mortality over reference sediment in static tests. 5 refs., 2 figs., 2 tabs.« less

Environmental geochemistry and sediment quality in Lake Pontchartrain: database development and review

USGS Publications Warehouse

Manheim, Frank T.; Flowers, George C.; McIntire, Andrew G.; Marot, Marcie; Holmes, Charles

1997-01-01

This paper reports on preliminary results of a project to develop a comprehensive data base of chemical and environmental information on sediments from Lake Pontchartrain, Louisiana, and surrounding water bodies. The goal is to evaluate all data for reliability and comparability, and to make it widely accessible and useful to all users. Methods for processing heterogeneous, historical data follow previous methods employed in the Boston Harbor and Massachusetts Bay area. Data from 11 different data sets, encompassing about 900 total samples, have been entered to date. Questionable or anomalous data were noted in a minority of cases. Problems tend to follow distinct patterns and are relatively easy to identify. Hence, comparability of data has not proven to be the major obstacle to synthesis efforts that was anticipated in earlier years (NRC, 1989). Quality-controlled data sets show that the bulk of sediment samples in the more central parts of Lake Pontchartrain have values within normal background for heavy metals like Cu, Pb, and Zn. The same or lower concentrations were found in the vicinity of the Bonnet Carre Spillway, representing influx from the Mississippi River. Mean concentrations for Cu, Pb, and Zn were 17, 21, and 74 µg/g (total dissolution analyses), respectively. However, values as high as 267 µg/g Pb and comparable increases for other metal and organic contaminants are found in sediments within 2 km of the coastal strip of New Orleans. Additional sampling in such areas and in other inland coastal waterways is needed, since such levels are above the threshold for potential toxic effects on benthic organisms, according to effects-based screening criteria. The most contaminated sites, Bayou Trepagnier and Bayou Bonfouca, involve industrial areas where waste discharge has now been controlled or remediated, but where sediments may retain large concentrations of contaminants, e.g. tenths of a percent of Pb, Cr, and Zn or more for Bayou Trepagnier.

Transitional Benthic Boundary Layers and their Influence on Nutrient Flux in Tidal Estuaries

NASA Astrophysics Data System (ADS)

Koetje, K. M.; Foster, D. L.; Lippmann, T. C.; Kalnejais, L. H.

2016-12-01

Quantifying the coupled physical and geochemical processes in the fluid-sediment interface is critical to managing coastal resources. This is of particular importance during times of enhanced hydrodynamic forcing where extreme tide or wind events can have a significant impact on water quality. A combination of field and laboratory experiments were used to examine the relationship between large-scale fluid shear stresses and geochemical fluxes at the fluid-sediment interface in the Great Bay Estuary, New Hampshire. Sediment geochemical measurements paired with flow field observations along estuary-wide transects over several tidal cycles provide nutrient load estimates that can be scaled to represent the whole Bay. Three-dimensional flow field measurements collected using a maneuverable personal watercraft were used to determine the spatial and temporal variability of the shear stress throughout the Bay. High-resolution bottom boundary layer dynamics were observed using a suite of acoustic Doppler current profilers (ADCP) in order to improve the accuracy of diffusive flux estimates by directly measuring the thickness of the benthic boundary layer. Over the 2.5 m tidal range and at water depths ranging from 0.3 m to 1.5 m at mean lower low water, peak mean flows ranged from 0.2 m/s to 1 m/s at the sampling sites. The dominant contribution of hydrodynamic forcing to the Bay is due to tidal flows, which are largely unidirectional during flood tide. Sediment grain size analysis characterized the bed at sampling sites as fine-grained sandy mud (d50 = 47 μm). Sampling during typical tidal flow conditions, a smooth turbulent flow field was observed and the threshold of motion was not exceeded. Along with sediment characterization, porosity profiles and erosion chamber experiments were used to characterize nutrient release. This host of data provides shear stress estimates that can constrain nutrient loads under variable hydrodynamic conditions.

Environmental impact assessment of sediment dumping in the southern Baltic Sea using meiofaunal indicators

NASA Astrophysics Data System (ADS)

Frenzel, Peter; Borrmann, Corinna; Lauenburg, Beate; Bohling, Björn; Bartholdy, Jan

2009-02-01

An experimental sediment dumping was carried out in the southern part of the Mecklenburg Bight in June 2001. Foraminiferans and ostracods from superficial sandy sediment were studied in a time series from before dumping until March 2004 in order to assess changes in associations and recolonization patterns of both groups. Additionally, an area sampling covering the dumping site and its surroundings from 15.5 to 20.7 m water depth made it possible to compare associations inside and outside the dumping area as well as the water depth dependent distribution of foraminiferans and ostracods. Salinity values vary within the high alpha-mesohaline and low polyhaline range. The dominating species are Ammotium cassis (Foraminifera) and Sarsicytheridea bradii (Ostracoda). The diversity is low (Fisher alpha index from 0.4 to 3.2 for foraminiferans and 1.0 to 2.5 for ostracods), but higher within the dumping site samples. These higher values are explainable by input of allochthonous tests and valves representing additional species. After the sediment dumping it took two and a half years to re-establish the total foraminiferan association and the total foraminifer/ostracod ratio within the dumping site. Total foraminiferan abundance increases remarkably with water depth (mean 83 tests in 100 ml) driven by higher nutrient availability and more suitable salinity and temperature values within the zone of the oscillating halocline. The distribution of shallow water species such as Cribroelphidium excavatum, Eucythere argus and Hirschmannia viridis, within the transient water layer A. cassis, Nodulina dentaliniformis, S. bradii and Palmoconcha laevata and below Eggerella scabra indicate the depth position of the halocline. Water depth and sediment dumping influence are the main driving factors for the distribution of foraminifer and ostracod associations within the study area. However, a significant sedimentological difference between samples inside and outside the dumping area is not recognizable.

Laboratory theory and methods for sediment analysis

USGS Publications Warehouse

Guy, Harold P.

1969-01-01

The diverse character of fluvial sediments makes the choice of laboratory analysis somewhat arbitrary and the pressing of sediment samples difficult. This report presents some theories and methods used by the Water Resources Division for analysis of fluvial sediments to determine the concentration of suspended-sediment samples and the particle-size distribution of both suspended-sediment and bed-material samples. Other analyses related to these determinations may include particle shape, mineral content, and specific gravity, the organic matter and dissolved solids of samples, and the specific weight of soils. The merits and techniques of both the evaporation and filtration methods for concentration analysis are discussed. Methods used for particle-size analysis of suspended-sediment samples may include the sieve pipet, the VA tube-pipet, or the BW tube-VA tube depending on the equipment available, the concentration and approximate size of sediment in the sample, and the settling medium used. The choice of method for most bed-material samples is usually limited to procedures suitable for sand or to some type of visual analysis for large sizes. Several tested forms are presented to help insure a well-ordered system in the laboratory to handle the samples, to help determine the kind of analysis required for each, to conduct the required processes, and to assist in the required computations. Use of the manual should further 'standardize' methods of fluvial sediment analysis among the many laboratories and thereby help to achieve uniformity and precision of the data.

An alternative method for the estimation of sedimentation rates using radiometric measurements in an intertidal region (sw of spain)

NASA Astrophysics Data System (ADS)

Ligero, Rufino; Casas-Ruiz, Melquiades; Barrera, Manuel; Barbero, Luis

2010-05-01

The techniques for the direct measurement of the sedimentation rate are reliable but slow and imprecise, given that the time intervals of measurement cannot be very long. Consequently it is an extremely laborious task to obtain a representative map of the sedimentation rates and such maps are available for very few zones. However, for most environmental studies, it is very important to know the sedimentation rates. The high degree of accuracy of the gamma spectrometric techniques together with the application of the model describes in this work, has allowed the determination of the sedimentation rates in a wide spatial area such of the Bay of Cadiz to be obtained with precision and consuming considerably less time in comparison to the traditional techniques. Even so, the experimental conditions required for the sample cores are fairly restrictive, and although the radiological method provides a quantitative advance in measurement, the experimental difficulty in the execution of the study is not greatly diminished. For this reason, a second model has been derived based on the measurement of the inventory, which offers economies in time and financial cost, and which allows the sedimentation rate in a region to be determined with satisfactory accuracy. Furthermore, it has been shown that the application of this model requires a precise determination of 137Cs inventories. The sedimentation rates estimated by the 137Cs inventory method ranged from 0.26 cm/year to 1.72 cm/year. The average value of the sedimentation rate obtained is 0.59 cm/year, and this rate has been compared with those resulting from the application of the 210Pb dating technique. A good agreement between the two procedures has been found. From the study carried out, it has been possible for the first time, to draw a map of sedimentation rates for this zone where numerous physical-chemical, oceanographic and ecological studies converge, since it is situated in a region of great environmental interest. This area, which is representative of common environmental coastal scenarios, is particularly sensitive to perturbations related to climate change, and the results of the study will allow to carry out short and medium term evaluations of this change.

K/Ar Dating of Fine Grained Sediments Near Prydz Bay, Antarctica: East Antarctic Ice Sheet Behavior During the Middle-Miocene Climate Transition

NASA Astrophysics Data System (ADS)

Duchesne, A. E.; Pierce, E. L.; Williams, T.; Hemming, S. R.; Johnson, D. L.; May, T.; Gombiner, J.; Torfstein, A.

2012-12-01

¶ The Middle Miocene Climate Transition (MMCT) (~14 Ma) represents a time of major East Antarctic Ice-Sheet (EAIS) expansion, with research suggesting major global sea level fall on the order of ~60 meters (John et al., 2011, EPSL). Ocean Drilling Program (ODP) core data from Site 1165B near Prydz Bay shows an influx of cobbles deposited ~13.8-13.5 Ma, representing a sudden burst of ice-rafted detritus (IRD) during the MMCT. Based on 40Ar/39Ar dating of hornblendes and/or biotite grains, 5 of 6 dated pebbles from a companion study show Wilkes Land origins, indicating transport from over 1500 kilometers away. However, samples throughout this time interval have an anomalously low abundance of sand, thus we seek to understand the sedimentary processes that led to the deposition of these isolated dropstones in a fine matrix through provenance studies of the core's terrigenous fine fraction. Geochemical provenance studies of the terrigenous fraction of marine sediments can aid in identifying past dynamic EAIS behavior; the few outcrops available on the continent provide specific rock characterizations and age constraints from which cored marine sediments can then be matched to using established radiogenic isotope techniques. Here we apply the K/Ar dating method as a provenance tool for identifying the source area(s) of fine-grained terrigenous sediments (<63 μm) deposited during the MMCT. ¶ After source area characterization, we find that the fine-grained sediments from the mid-Miocene show a mixture of both local Prydz Bay sourcing (~400 Ma signature) and Wilkes Land provenance (~900 Ma signature). While locally-derived Prydz Bay sediments are likely to have been delivered via meltwater from ice and deposited as hemipelagic sediments (with some possible bottom current modification, as this is a drift site), sediments sourced from Wilkes Land required transport via large icebergs. Future work will involve further provenance determination on both the fine-grained sediments and the abundant dropstones deposited at ODP Site 1165B during the MMCT. We anticipate that the use of the K/Ar radiometric dating technique as a proxy for the study of glacially transported fine-grained terrigenous materials will enable future Antarctic provenance research and further aid in providing insight into past EAIS behavior.; ODP Core 34X from Site 1165B

Chemical characterisation of dredged sediments in relation to their potential use in civil engineering.

PubMed

Zuliani, Tea; Mladenovič, Ana; Ščančar, Janez; Milačič, Radmila

2016-04-01

During capital and/or maintenance dredging operations, large amounts of material are produced. Instead of their discharge, dredged sediments may be a valuable natural resource if not contaminated. One of the possible areas of application is civil engineering. In the present work, the environmental status of seaport dredged sediment was evaluated in order to investigate its potential applicability as a secondary raw material. Sediments were analysed for element concentrations in digested samples, aqueous extracts and fractions from sequential extraction; for fluoride, chloride and sulphate concentrations in aqueous extracts; and for tributyltin (TBT). Granulometric and mineralogical compositions were also analysed. The elemental impact was evaluated by calculation of the enrichment factors. The total element concentrations determined showed moderate contamination of the dredged sediments as was confirmed also by their moderate enrichment factors, presumably as a result of industrial and port activities. Elemental concentrations in the aqueous extract were very low and therefore do not represent any hazard for the environment. The water-soluble element concentrations were under the threshold levels set by the EU Directive on the landfill of waste, on the basis of which the applicability of dredged sediments in civil engineering is evaluated, while the content of chloride and sulphate were above the threshold levels. It was found out that due to the large amounts of sediment available, civil engineering applications such as the construction of embankments and backfilling is the most beneficial recycling solution at present.

Use of porewater extracts to identify the cause of toxicity in marine and estuarine sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Douglas, W.S.

1994-12-31

Amphipod toxicity tests in the evaluation of dredged material proposed for ocean disposal has come under increased scrutiny by the regulated community in the Port of NY/NJ. In recent large-scale assessments of sediment quality in the harbor, the vast majority of locations were deemed highly contaminated when tested with Ampelisca abdita. Toxicity tests, by themselves, do not provide data regarding the cause of toxicity of these sediments. The enormous potential costs associated with most proposed alternatives to ocean disposal of dredged sediments has prompted the investigation of the causative agents of toxicity in sediments of the NY/NJ Harbor. Sediment frommore » five locations in the harbor, selected in consultation with local regulatory agencies to represent diverse potential contamination scenarios, was collected and tested for toxicity to the amphipods Ampelisca abdita, Leptocheirus plumulosus, Eohaustorius estuadus, Rhepoxynius abronius, and the mysid shrimp, Mysidopsis bahia, using 10-day static bioassays. Porewater from each of the five sediments was extracted under centrifugation and used in water-only toxicity tests with A. abdita, L. plumulosus, R. abronius, E. estuadus, M. bahia, M. beryllina, and Microtox. A Phase 1 Toxicity Identification Evaluation of the three most toxic porewater samples was conducted using several of the species tested. Results from the preliminary investigations and the ongoing TIE`s will be presented. Species selection, porewater toxicity test procedures, and Phase 1, 2, and 3 paradigms will be discussed.« less

Evaluating bacterial community structures in oil collected from the sea surface and sediment in the northern Gulf of Mexico after the Deepwater Horizon oil spill

PubMed Central

Liu, Zhanfei; Liu, Jiqing

2013-01-01

Bacterial community structures were evaluated in oil samples using culture-independent pyrosequencing, including oil mousses collected on sea surface and salt marshes during the Deepwater Horizon oil spill, and oil deposited in sediments adjacent to the wellhead 1 year after the spill. Phylogenetic analysis suggested that Erythrobacter, Rhodovulum, Stappia, and Thalassospira of Alphaproteobacteria were the prevailing groups in the oil mousses, which may relate to high temperatures and strong irradiance in surface Gulf waters. In the mousse collected from the leaves of Spartina alterniflora, Vibrio of Gammaproteobacteria represented 57% of the total operational taxonomic units, suggesting that this indigenous genus is particularly responsive to the oil contamination in salt marshes. The bacterial communities in oil-contaminated sediments were highly diversified. The relatively high abundance of the Methylococcus, Methylobacter, Actinobacteria, Firmicutes, and Chlorofexi bacteria resembles those found in certain cold-seep sediments with gas hydrates. Bacterial communities in the overlying water of the oil-contaminated sediment were dominated by Ralstonia of Betaproteobacteria, which can degrade small aromatics, and Saccharophagus degradans of Gammaproteobacteria, a cellulose degrader, suggesting that overlying water was affected by the oil-contaminated sediments, possibly due to the dissolution of small aromatics and biosurfactants produced during biodegradation. Overall, these results provided key information needed to evaluate oil degradation in the region and develop future bioremediation strategies. PMID:23568850

Physical properties of pressurized sediment from hydrate ridge

USGS Publications Warehouse

Winters, William J.; Waite, William F.; Mason, David H.; Gilbert, Lauren

2006-01-01

As part of an ongoing laboratory study, preliminary acoustic, triaxial strength, and electrical resistivity results are presented from a test performed on a clayey silt sediment sample recovered from Site 1249 at the summit of southern Hydrate Ridge during Ocean Drilling Program Leg 204. The test specimen was stored and transported in two different methane-charged pressure vessels until it was tested using the Gas Hydrate and Sediment Test Laboratory Instrument (GHASTLI). Although gas hydrate may have existed in the core section immediately after recovery, little (if any) hydrate was present in the specimen during testing. We therefore present background physical property results for sediment that may have hosted gas hydrate in situ. Because we consolidated the test specimen in increments beyond its in situ stress state, we are able to present properties representative of similar but deeper subbottom sediment. The increased consolidation stress also helped to mitigate some, but not all, types of disturbance caused by the recovery process. P-wave velocities from 1.54 to 1.74 km/s varied linearly with consolidation stress, σ′c, up to 970 kPa (equivalent to ~160 meters below seafloor). Electrical resistivity was periodically measured by a Wenner array and varied between 1.0 and 2.8 Ωm. These values reflect both the pore water salinity and soft, fine-grained texture of the sediment. Shear behavior is consistent with the induced normally consolidated behavior of clayey silt.

The relationship between land management, fecal indicator bacteria, and the occurrence of Campylobacter and Listeria spp. in water and sediments during synoptic sampling in the S. Fork Broad River Watershed, N.E. Georgia, U.S.A

NASA Astrophysics Data System (ADS)

Bradshaw, J. K.; Molina, M.; Sidle, R. C.; Sullivan, K.; Oakley, B.; Berrang, M.; Meinersmann, R.

2013-12-01

Fecal indicator bacteria (FIB) and pathogens stored in the bed sediments of streams and rivers may be mobilized into the water column affecting overall water quality. Furthermore, land management may play an important role in the concentrations of FIB and the occurrence of pathogens in stream water and sediments. The purpose of this study was to determine the relationship between FIB and pathogens in stream water and sediment based on three land management-affected categories: agricultural, forest, and waters receiving treated municipal wastewater. Two synoptic sampling events were conducted under baseflow conditions (<0.64 cm of rain within 24h) between October-November, 2012 and May-June, 2013. Counts of the E. coli and E. faecalis and occurrences of the enteric pathogens Campylobacter and Listeria spp. were measured in stream water and sediment samples collected at 15 locations (six agricultural (AG); six forested (FORS); and three receiving discharge from water pollution control plants (WPCP)) in the S. Fork Broad River watershed located in northeast Georgia, USA. Mean E. coli and E. faecalis concentrations were highest in the AG stream water samples (3.08 log MPN 100 mL -1 for E. coli and 3.07 log CFU 100 mL -1 for E. faecalis ) and lowest in the FORS water samples for E. coli (2.37 log MPN 100 mL -1 ) and WPCP water samples for E. faecalis (2.53 log CFU 100 mL -1 ). E. coli concentrations (2.74 log MPN 100 mL -1 ) in the WPCP streams were intermediate. Similar to water samples, E. coli concentrations were highest in the AG sediments (4.31 log MPN g -1 ), intermediate in the WPCP sediments (4.06 log MPN g -1 ), and lowest in the FORS sediments (3.46 log MPN g -1 ). In contrast to E. coli, E. faecalis concentrations were lower (1.10 to 1.31 log CFU g -1 ) and relatively more constant than E. coli in sediments over the three land management categories. Campylobacter was detected in 27% of the water samples and 8% of the sediment samples. The highest occurrence of Campylobacter detection was in the AG streams (15% of the water samples; 5% of the sediment samples). Listeria was detected in 76% of the water samples and 65% of the sediment samples. The FORS and AG streams had the highest occurrence of Listeria in water and sediment (32% and 29% of the water samples, respectively; 24% and 29% of sediment samples, respectively) suggesting Listeria is fairly ubiquitous in these streams. Based on the high concentrations of E. faecalis in water and E. coli in water and sediment, and higher frequency of Campylobacter detection in the AG streams, this study indicates that E. coli and Campylobacter may occur in high concentrations in stream sediments in land management areas where fecal material is deposited directly by livestock into the stream or adjacent land in large doses.

ANALOG: a program for estimating paleoclimate parameters using the method of modern analogs

USGS Publications Warehouse

Schweitzer, Peter N.

1994-01-01

Beginning in the 1970s with CLIMAP, paleoclimatologists have been trying to derive quantitative estimates of climatic parameters from the sedimentary record. In general the procedure is to observe the modern distribution of some component of surface sediment that depends on climate, find an empirical relationship between climate and the character of sediments, then extrapolate past climate by studying older sediments in the same way. Initially the empirical relationship between climate and components of the sediment was determined using a multiple regression technique (Imbrie and Kipp, 1971). In these studies sea-floor sediments were examined to determine the percentage of various species of planktonic foraminifera present in them. Supposing that the distribution of foraminiferal assemblages depended strongly on the extremes of annual sea-surface temperature (SST), the foraminiferal assemblages (refined through use of varimax factor analysis) were regressed against the average SST during the coolest and warmest months of the year. The result was a set of transfer functions, equations that could be used to estimate cool and warm SST from the faunal composition of a sediment sample. Assuming that the ecological preference of the species had remained constant throughout the last several hundred thousand years, these transfer functions could be used to estimate SSTs during much of the late Pleistocene. Hutson (1980) and Overpeck, Webb, and Prentice (1985) proposed an alternative approach to estimating paleoclimatic parameters. Their 'method of modern analogs' revolved not around the existence of a few climatically-sensitive faunal assemblages but rather on the expectation that similar climatic regimes should foster similar faunal and floral assemblages. From a large pool of modern samples, those few are selected whose faunal compositions are most similar to a given fossil sample. Paleoclimate estimates are derived using the climatic character of only the most similar modern samples, the modern analogs of the fossil sample. This report describes how to use the program ANALOG to carry out the method of modern analogs. It is assumed that the user has faunal census estimates of one or more fossil samples, and one or more sets of faunal data from modern samples. Furthermore, the user must understand the taxonomic categories represented in the data sets, and be able to recognize taxa that are or may be considered equivalent in the analysis. ANALOG provides the user with flexibility in input data format, output data content, and choice of distance measure, and allows the user to determine which taxa from each modern and fossil data file are compared. Most of the memory required by the program is allocated dynamically, so that, on systems that permit program segments to grow, the program consumes only as many system resources as are needed to accomplish its task.

Distribution of organic and inorganic substances in the sediments of the "Great Bačka Canal", a European environmental hotspot.

PubMed

Krčmar, Dejan; Dubovina, Miloš; Grba, Nenad; Pešić, Vesna; Watson, Malcolm; Tričković, Jelena; Dalmacija, Božo

2017-12-01

The Great Bačka Canal in Serbia is one of the most polluted waterways in Europe. Surface sediments from the canal were subject to systematic annual monitoring between 2007 and 2014 at 33 representative sampling sites. Eight heavy metals (Ni, Zn, Cd, Cr, Cu, Pb, As and Hg), mineral oils, 16 EPA PAHs and selected pesticides and polychlorinated biphenyls (PCB) were monitored. This study aims to evaluate the quality of the sediments and determine the potential ecological risks in order to establish pollutants of interest. The spatial and temporal influence of different and intense sources of pollution are investigated. The analysis includes multivariate statistical methods (factor analysis of principal component analysis (PCA/FA)) in order to assess the extent and origin (anthropogenic or natural, geogenic sources) of the contaminants detected in the sediment samples and the risks the present to the environment. Various sources, predominantly the food industry, were found to be responsible for most of the contamination by Cd, Cu, Cr and Zn, the mineral oils and PAHs (dibenzo[a,h]anthracene and benzo[a]pyrene contributed 86.0% of the total between 2007 and 2014). In contrast, the As was convincingly of geogenic origin, and the Hg, Pb and Ni present exhibit dual origins. Cd and Cu significantly raise the levels of potential ecological risk at all sampling locations, demonstrating the long-term effects of bioaccumulation and biomagnification. Significantly, the results of this work indicate that Cu, As and dibenzo[a,h]anthracene should be added to the EU watch list of emerging contaminants. This is supported by significant national and similar environmental data from countries in the region. Copyright © 2017 Elsevier B.V. All rights reserved.

Herbicides induce change in metabolic and genetic diversity of bacterial community from a cold oligotrophic lake.

PubMed

Aguayo, P; González, C; Barra, R; Becerra, J; Martínez, M

2014-03-01

Pristine cold oligotrophic lakes show unique physical and chemical characteristics with permanent fluctuation in temperature and carbon source availability. Incorporation of organic toxic matters to these ecosystems could alter the bacterial community composition. Our goal was to assess the effects of simazine (Sz) and 2,4 dichlorophenoxyacetic acid (2,4-D) upon the metabolic and genetic diversity of the bacterial community in sediment samples from a pristine cold oligotrophic lake. Sediment samples were collected in winter and summer season, and microcosms were prepared using a ration 1:10 (sediments:water). The microcosms were supplemented with 0.1 mM 2,4-D or 0.5 mM Sz and incubated for 20 days at 10 °C. Metabolic diversity was evaluated by using the Biolog Ecoplate™ system and genetic diversity by 16S rDNA amplification followed by denaturing gradient gel electrophoresis analysis. Total bacterial counts and live/dead ratio were determined by epifluorescence microscopy. The control microcosms showed no significant differences (P > 0.05) in both metabolic and genetic diversity between summer and winter samples. On the other hand, the addition of 2,4-D or Sz to microcosms induces statistical significant differences (P < 0.05) in metabolic and genetic diversity showing the prevalence of Actinobacteria group which are usually not detected in the sediments of these non-contaminated lacustrine systems. The obtained results suggest that contaminations of cold pristine lakes with organic toxic compounds of anthropic origin alter their homeostasis by inhibiting specific susceptible bacterial groups. The concomitant increase of usually low representative bacterial groups modifies the bacterial composition commonly found in this pristine lake.

Seasonally and regionally determined indication potential of bioassays in contaminated river sediments.

PubMed

Hilscherová, Klára; Dusek, Ladislav; Sídlová, Tereza; Jálová, Veronika; Cupr, Pavel; Giesy, John P; Nehyba, Slavomír; Jarkovský, Jirí; Klánová, Jana; Holoubek, Ivan

2010-03-01

River sediments are a dynamic system, especially in areas where floods occur frequently. In the present study, an integrative approach is used to investigate the seasonal and spatial dynamics of contamination of sediments from a regularly flooded industrial area in the Czech Republic, which presents a suitable model ecosystem for pollutant distribution research at a regional level. Surface sediments were sampled repeatedly to represent two different hydrological situations: spring (after the peak of high flow) and autumn (after longer period of low flow). Samples were characterized for abiotic parameters and concentrations of priority organic pollutants. Toxicity was assessed by Microtox test; genotoxicity by SOS-chromotest and green fluorescent protein (GFP)-yeast test; and the presence of compounds with specific mode of action by in vitro bioassays for dioxin-like activity, anti-/androgenicity, and anti-/estrogenicity. Distribution of organic contaminants varied among regions and seasonally. Although the results of Microtox and genotoxicity tests were relatively inconclusive, all other specific bioassays led to statistically significant regional and seasonal differences in profiles and allowed clear separation of upstream and downstream regions. The outcomes of these bioassays indicated an association with concentrations of polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs) as master variables. There were significant interrelations among dioxin-like activity, antiandrogenicity and content of organic carbon, clay, and concentration of PAHs and PCBs, which documents the significance of abiotic factors in accumulation of pollutants. The study demonstrates the strength of the specific bioassays in indicating the changes in contamination and emphasizes the crucial role of a well-designed sampling plan, in which both spatial and temporal dynamics should be taken into account, for the correct interpretations of information in risk assessments.

Nitrate and Phosphate Contents on Sediments Related to The Density Levels of Mangrove Rhizophora Sp. in Mangrove Park Waters of Pekalongan, Central Java

NASA Astrophysics Data System (ADS)

Supriyantini, E.; Santoso, A.; Soenardjo, N.

2018-02-01

Mangrove Park waters area of Pekalongan City, Central Java, used to be an aquaculture field, now turning the function into a restoration-based mangrove area, and now it has undergone rehabilitation. The conditions may affect the distribution of nitrate and phosphate content. The objective of this study was to determine the content of nitrates and phosphates in sediments related to the density levels of mangrove Rhizophora sp. The method used in this research was a descriptive method, and sampling was done by purposive sampling method. Water and sediment sampling were conducted at three stations respectively, representing: no mangrove area but used as a residential and tourist area (station 1); less dense mangrove (station 2); and, the previously aquaculture field - or medium dense mangrove (station 3). The results showed that the content of nitrate and phosphate in the whole sediment showed a low fertility rate. Average nitrate content for station 1, station 2 and station 3 were 0.86 mg/100 g, 0.94 mg/100 g and 0.81 mg/100 g, respectively. The average phosphate content at each station were 1.14 mg/100 g, 0.04 mg/100 g and 0.05 mg/100 g, respectively. Except to the station 1 that was no vegetation anymore, the mangrove density levels at two other stations at study sites were relatively low to medium; at station 2 was 0.8 ind/10 m2 and at station 3 was 1.2 ind/10 m2. The role of nitrate and phosphate were for mangrove growth at the site.

Empirical models for predicting volumes of sediment deposited by debris flows and sediment-laden floods in the transverse ranges of southern California

USGS Publications Warehouse

Gartner, Joseph E.; Cannon, Susan H.; Santi, Paul M

2014-01-01

Debris flows and sediment-laden floods in the Transverse Ranges of southern California pose severe hazards to nearby communities and infrastructure. Frequent wildfires denude hillslopes and increase the likelihood of these hazardous events. Debris-retention basins protect communities and infrastructure from the impacts of debris flows and sediment-laden floods and also provide critical data for volumes of sediment deposited at watershed outlets. In this study, we supplement existing data for the volumes of sediment deposited at watershed outlets with newly acquired data to develop new empirical models for predicting volumes of sediment produced by watersheds located in the Transverse Ranges of southern California. The sediment volume data represent a broad sample of conditions found in Ventura, Los Angeles and San Bernardino Counties, California. The measured volumes of sediment, watershed morphology, distributions of burn severity within each watershed, the time since the most recent fire, triggering storm rainfall conditions, and engineering soil properties were analyzed using multiple linear regressions to develop two models. A “long-term model” was developed for predicting volumes of sediment deposited by both debris flows and floods at various times since the most recent fire from a database of volumes of sediment deposited by a combination of debris flows and sediment-laden floods with no time limit since the most recent fire (n = 344). A subset of this database was used to develop an “emergency assessment model” for predicting volumes of sediment deposited by debris flows within two years of a fire (n = 92). Prior to developing the models, 32 volumes of sediment, and related parameters for watershed morphology, burn severity and rainfall conditions were retained to independently validate the long-term model. Ten of these volumes of sediment were deposited by debris flows within two years of a fire and were used to validate the emergency assessment model. The models were validated by comparing predicted and measured volumes of sediment. These validations were also performed for previously developed models and identify that the models developed here best predict volumes of sediment for burned watersheds in comparison to previously developed models.

Sedimentary processes on the Storfjorden trough-mouth fan during last deglaciation phase: the role of subglacial meltwater plumes on continental margin sedimentation

NASA Astrophysics Data System (ADS)

Lucchi, Renata G.; Camerlenghi, Angelo; Colmenero-Hidalgo, Elena; Sierro, Francisco J.; Bárcena, Maria Angeles; Flores, José-Abel; Urgeles, Roger; Macrı, Patrizia; Sagnotti, Leonardo; Caburlotto, Andrea

2010-05-01

The continental margin of the Southern Storfjorden trough-mouth fan was investigated within the SVAIS project (BIO Hesperides cruise, August 2007) as a Spanish contribution to IPY Activity N. 367 (Neogene ice streams and sedimentary processes on high- latitude continental margins - NICE STREAMS). The objectives were to investigate the glacially-dominated late-Neogene-Quaternary sedimentary architecture of the NW Barents Sea continental margin and reconstruct its sedimentary system in response to natural climate change. The paleo-ice streams in Storfjorden had a small catchment area draining ice from the southern Spitsbergen and Bear Island. The short distance from the ice source to the calving front produced a short residence time of ice, and therefore a rapid response to climatic changes. Here ground truthing recovered the last few thousands years sedimentary sequence thought to represent last deglaciation phase. Detailed palaeostratigraphic investigations together with paleomagnetic and rock magnetic analyses and AMS dating define the constraints for high-resolution inter-core correlation and dating. Most of the cores contain at the base gravity-mass deposits including debris flows and over-consolidated glacigenic diamicton. Mass deposits are overlain by an oxidized interval originated at the release and sink of fresh, cold and oxygenated melt-waters at the inception of the deglaciation phase. On the upper slope the oxidized interval is overlain by several meters of finely-stratified sediments composed of sandy-silt layers cyclically recurring within finer-grained laminated silty-clay sediments. Textural and compositional analyses suggest preferential deposition by settling from meltwater sediment-laden plumes (plumites) occurred during deglaciation with coarser layers representing episodes of subglacial meltwater discharge (glacial hyperpycnal flows) accompanying the ice streams retreat. The laminated sequence is truncated at uppermost part by a more recent gravity-mass deposit that possibly removed part of the younger sequence. In the deeper part of the slope the plumites consist of crudely laminated, terrigenous and almost barren sediments. Here the sedimentary sequence is topped by intensively bioturbated, bioclasts-bearing silty-clays representing the most recent interglacial sedimentation. On the continental shelf, the upper sedimentary sequence contains dispersed cm-thick bivalve's shells suggesting an oxygenated and nutrient-rich environment (interglacial) overlaying an interval of terrigenous, barren sediments (deglaciation). Here the short core's length suggests the presence of stiffer/coarser sediments at the base that could not be sampled. The seismic stratigraphy indicates that the slope is formed by alternating debris flow deposits and layered sediments corresponding into our cores to the fast-deposited, low-density, terrigenous plumites. Bathymetric and seismic data revealed the presence of widespread submarine landslides restricted to the southernmost part of Storfjorden continental slope. Geotechnical investigation are in progress in order to understand if such layered deposits can act on the slope as a possible preferential weak horizon favoring sediment failure.

Reconstructing the Glacial Cycle of the Last 150 ka in the Southern Bay of Bengal

NASA Astrophysics Data System (ADS)

Holmes, B.; Dekens, P.; Weber, M. E.; Lantzsch, H.; Reilly, B. T.; Das, S. K.; Martos, Y. M.; Williams, T.

2017-12-01

The Himalayas and resulting monsoonal climate provide the source and mechanism for sediment deposition in the Bay of Bengal. Sediments from the distal Bengal Fan collected during IODP expedition 354, with the exception the westernmost Site U1454, show a several meter thick, hemipelagic top layer representing the Late Quaternary. This interval has abundant foraminifera throughout and therefore presents a unique opportunity to reconstruct oceanographic conditions, alongside records of terrestrial climate variability. We reconstructed oceanographic conditions at IODP site U1452 (8°N, 87°E, 3671 m water depth), in the southern Bay of Bengal. The age model was constructed by tuning the core's sediment lightness, L*, to the EDML ice core. The Toba Ash 1 (73.7 ka) is an additional constraint leading to an age model with a total of 35 tie points. We sampled the top 3.5 m of sediment at 2 cm resolution, and picked between 8 to 30 tests of the mixed surface layer planktonic foraminifera G. sacculifer from each sample. The tests were cracked open between two glass plates and the sample was homogenized before being split into separate aliquots for d18O and Mg/Ca analysis. Mg/Ca data range from 2.5 to 4.1 mmol/mol and show a SST change of 2-4°C between glacial and interglacial times. The δ18O data range from -2.63 to 0.17‰. The data shows the shift from the cooler glacial period into the warming interglacial period at 15 ka ending the LGM. The apparent late timing of the deglaciation in the record could be an artifact of lower resolution of the δ18O data (compared to the benthic stack). It is also possible the offset in the timing is due to the age model limitations and the assumption of linear sedimentation rates between tie points. We will further explore the age model implications by measuring d18O on benthic foraminifera where available in the sediment core. In collaboration with scientists from IODP Expedition 354, this data can be used to examine the link between tropical ocean conditions, monsoon strength, and glacial cycles.

A Comparison of Naturally-Occurring and Artificially Stimulated Uranium(VI) Bioreduction in Sediment from a Field-scale Experiment in Rifle, CO

NASA Astrophysics Data System (ADS)

Campbell, K. M.; Williams, K. H.; Lesher, E.; Davis, J. A.; Long, P. E.

2007-12-01

Long-term remediation of uranium (U)-contaminated groundwater poses one of the greatest challenges in the clean-up of impacted sites. One solution is to reduce dissolved U(VI) to insoluble U(IV) precipitates by stimulating indigenous metal reducing bacterial populations in situ. Contamination from a former U mine tailings repository (Rifle, CO) provides a research site to study the efficacy of biostimulated U(VI) reduction at the field scale. Several cores were drilled in June 2007 across a region of naturally-occurring U(VI) bioreduction. The cores represent a cross section of sediment that ranges from minimally reducing to highly reducing. Anaerobic sediment samples from the cores were analyzed for labile U(VI) content by carbonate extraction in anoxic conditions (pH 9.4, 14 mM NaHCO3, 2.8 mM Na2CO¬3). A subset of the same core sections were dried and oxidized by exposure to air for 2 weeks. The carbonate extraction was repeated, and the amount of U(IV) present in the anaerobic sample was calculated by difference between the anoxic and oxidized extractions. An acid extraction was also performed on the oxidized sediments to compare the carbonate extractable and the acid extractable U fractions. The highest U concentrations were found in the highly bioreduced sediment, with the majority of U present as U(IV) (66-92%). The regions of highest bioreduction also correspond to elevated concentrations of solid phase organic carbon, suggesting that natural bioreduction is stimulated by zones of increased organic carbon content. The same field site was then used for an artificially stimulated bioreduction experiment, where the indigenous bacterial community was stimulated by injecting acetate upgradient of the core collection location. Carbonate and acid extractions were performed on core samples taken after the completion of the acetate injection. This work evaluates the composition of the sediment before and after biostimulation as a way of directly comparing the extent of natural U(VI) bioreduction to acetate-stimulated bioreduction in order to facilitate the design of a more effective bioremediation strategy for this site.

Tephra Sedimentation from a Short-term Wind-affected Volcanic Plume of the 8 October 2016 Aso Nakadake Eruption, Japan

NASA Astrophysics Data System (ADS)

Tsuji, T.; Nishizaka, N.; Onishi, K.

2017-12-01

Sedimentation processes during explosive volcanic eruptions can be constrained based on detailed analysis of grain-size variation of tephra deposits. Especially, an accurate description of the amount of fine particles has also significant implications for the assessment of specific tephra hazards. Grain size studies for single short-term eruption has advantage to contribute understanding the sedimentation processes because it is simple compared to long-lasting eruption. The 2016 Aso Nakadake eruption, Japan represents an ideal for the study of short-term eruptions thanks to an accurate investigation. Then, we investigate the grain size variation with distance from the vent and sedimentological features of the deposit to discuss the sedimentation processes of the tephra fragments. The eruption provided pyroclastic flow deposit and fallout tephra which distributed NE to ENE direction from the vent. The deposits between 4 and 20 km from vent consist of fine-coated lapilli to coarse ash, ash pellet and mud droplet in ascending degree. The samples are lapilli-bearing within 20 km from vent and those outside of 20 km mainly consist of ash particles. Detailed analyses of individual samples highlight a rapid decay of maximum and mean grain size for the deposit from proximal to distal. The decay trend of maximum grain-size is approximated by three segments of exponential curves with two breaks-in-slope at 10 and 40 km from vent. Most of the sampled deposits are characterized by bimodal grain-size distributions, with the modes of the coarse subpopulation decreasing with distance from vent and those of the fine subpopulation being mostly stable. The fine subpopulation has been interpreted as being mostly associated with size-selective sedimentation processes (e.g., particle aggregation) confirmed by the existence of fine-coated particles, ash pellet and mud droplet. As the fine-coated particles generally have a higher terminal velocity than the individual constituent particles, those could be related with the rapid decrease of maximum grain-size with distance from vent at proximal area. Further detail grain-size analyses and theoretical studies can be contributed to understand the effect of fine ash aggregation on sedimentation processes quantitatively.

Concentrations of Elements in Sediments and Selective Fractions of Sediments, and in Natural Waters in Contact with Sediments from Lake Roosevelt, Washington, September 2004

USGS Publications Warehouse

Paulson, Anthony J.; Wagner, Richard J.; Sanzolone, Richard F.; Cox, Steven E.

2006-01-01

Twenty-eight composite and replicate sediment samples from 8 Lake Roosevelt sites were collected and analyzed for 10 alkali and alkaline earth elements, 2 non-metals, 20 metals, and 4 lanthanide and actinide elements. All elements were detected in all sediment samples except for silver (95 percent of the elements detected for 1,008 analyses), which was detected only in 4 samples. Sequential selective extraction procedures were performed on single composite samples from the eight sites. The percentage of detections for the 31 elements analyzed ranged from 76 percent for the first extraction fraction using a weak extractant to 93 percent for the four-acid dissolution of the sediments remaining after the third sequential selective extraction. Water samples in various degrees of contact with the sediment were analyzed for 10 alkali and alkaline earth elements, 5 non-metals, 25 metals, and 16 lanthanide and actinide elements. The filtered water samples included 10 samples from the reservoir water column at 8 sites, 32 samples of porewater, 55 samples from reservoir water overlying sediments in 8 cores from the site incubated in a field laboratory, and 24 water samples that were filtered after being tumbled with sediments from 8 sites. Overall, the concentrations of only 37 percent of the 6,776 analyses of the 121 water samples were greater than the reporting limit. Selenium, bismuth, chromium, niobium, silver, and zirconium were not detected in any water samples. The percentage of concentrations for the water samples that were above the reporting limit ranged from 14 percent for the lanthanide and actinide elements to 77 percent for the alkali and alkaline earth elements. Concentrations were greater than reporting limits in only 23 percent of the analyses of reservoir water and 29 percent of the analyses of reservoir water overlying incubation cores. In contrast, 47 and 48 percent of the concentrations of porewater and water samples tumbled with sediments, respectively, were greater than the reporting limit.

Large-scale risk assessment of polycyclic aromatic hydrocarbons in shoreline sediments from Saudi Arabia: environmental legacy after twelve years of the Gulf war oil spill.

PubMed

Bejarano, Adriana C; Michel, Jacqueline

2010-05-01

A large-scale assessment of polycyclic aromatic hydrocarbons (PAHs) from the 1991 Gulf War oil spill was performed for 2002-2003 sediment samples (n = 1679) collected from habitats along the shoreline of Saudi Arabia. Benthic sediment toxicity was characterized using the Equilibrium Partitioning Sediment Benchmark Toxic Unit approach for 43 PAHs (ESBTU(FCV,43)). Samples were assigned to risk categories according to ESBTU(FCV,43) values: no-risk (< or = 1), low (>1 - < or = 2), low-medium (>2 - < or = 3), medium (>3 - < or = 5) and high-risk (>5). Sixty seven percent of samples had ESBTU(FCV,43) > 1 indicating potential adverse ecological effects. Sediments from the 0-30 cm layer from tidal flats, and the >30 - <60 cm layer from heavily oiled halophytes and mangroves had high frequency of high-risk samples. No-risk samples were characterized by chrysene enrichment and depletion of lighter molecular weight PAHs, while high-risk samples showed little oil weathering and PAH patterns similar to 1993 samples. North of Safaniya sediments were not likely to pose adverse ecological effects contrary to sediments south of Tanaqib. Landscape and geomorphology has played a role on the distribution and persistence in sediments of oil from the Gulf War. Copyright 2009 Elsevier Ltd. All rights reserved.

The influence of particles recycling on the geochemistry of sediments in a large tropical dam lake in the Amazonian region, Brazil

NASA Astrophysics Data System (ADS)

Fonseca, Rita; Pinho, Catarina; Oliveira, Manuela

2016-12-01

As a result of over-erosion of soils, the fine particles, which contain the majority of nutrients, are easily washed away from soils, which become deficient in a host of components, accumulating in lakes. On one hand, the accumulation of nutrients-rich sediments are a problem, as they affect the quality of the overlying water and decrease the water storage capacity of the system; on the other hand, sediments may constitute an important resource, as they are often extremely rich in organic and inorganic nutrients in readily available forms. In the framework of an extensive work on the use of rock related materials to enhance the fertility of impoverish soils, this study aimed to evaluate the role on the nutrients cycle, of particles recycling processes from the watershed to the bottom of a large dam reservoir, at a wet tropical region under high weathering conditions. The study focus on the mineralogical transformations that clay particles undergo from the soils of the drainage basin to their final deposition within the reservoir and their influence in terms of the geochemical characteristics of sediments. We studied the bottom sediments that accumulate in two distinct seasonal periods in Tucuruí reservoir, located in the Amazonian Basin, Brazil, and soils from its drainage basin. The surface layers of sediments in twenty sampling points with variable depths, are representative of the different morphological sections of the reservoir. Nineteen soil samples, representing the main soil classes, were collected near the margins of the reservoir. Sediments and soils were subjected to the same array of physical, mineralogical and geochemical analyses: (1) texture, (2) characterization and semi-quantification of the clay fraction mineralogy and (3) geochemical analysis of the total concentration of major elements, organic compounds (organic C and nitrogen), soluble fractions of nutrients (P and K), exchangeable fractions (cation exchange capacity, exchangeable bases and acidity) and pH(H2O). There is a remarkable homogeneity in the sedimentary distribution along the reservoir in terms of the texture and mineralogy of the clay fraction and of the chemistry of the total, soluble and exchangeable phases. These observations contrast with the physical, morphological and chemical heterogeneity of the soils and the setting lithology. Most of the sediments has a higher contribution of fine-grained material and the mineralogy of the clay fraction is dominated by kaolinite in soils and kaolinite and illite in sediments, followed by lesser amounts of gibbsite, goethite, and metahaloisite and by small/vestigial contents of chlorite and smectite. The sediments are mainly inherited from the watershed but there exist marked differences between the accumulated sediments and their parent materials. These differences mainly come from the selective erosion of fine-grained particles and the extreme climatic conditions which enhance complex transformations of mineralogical and chemical nature. Compared with the parental soils, the reservoir sediments show the following differences: (1) enrichment in fine-grained and less dense inorganic particles, (2) aggradative mineralogical transformations, including enrichment in clay minerals with higher cationic adsorption and exchange capacity, (3) degradation of the crystalline structure of Fe- and Al-oxides (goethite, gibbsite), (4) increase in easily leached elements (Mg, Ca, P, K, Na) and decrease in chemically less mobile elements (Si, Fe) and (5) higher contents of organic carbon, nitrogen, and soluble forms of P and K, mainly concentrated in the clay fraction. These transformations are extremely important in the nutrients cycle, denoting that sediments represent an efficient sink for nutrients from the over-erosion of soils. Mineral and organic compounds can permanently or temporarily sequester these nutrients, recycling them and enhancing their availability through the slow release of components from relatively loose crystal structures. These processes can easily explain the enrichment in soluble and exchangeable forms of elements such as P, K, Ca or Mg. This study conclude that the particles recycling in a large tropical dam reservoir which receives high fluxes of allochthonous nutrients, has an important role in the good quality of sediments for agricultural use and in the profitable use of this technology to recover depleted soils in remediation projects in regions near large hydroelectric plants.

Environmental and Anthropogenic Factors Influencing Mercury Dynamics During the Past Century in Floodplain Lakes of the Tapajós River, Brazilian Amazon.

PubMed

Oestreicher, Jordan Sky; Lucotte, Marc; Moingt, Matthieu; Bélanger, Émilie; Rozon, Christine; Davidson, Robert; Mertens, Frédéric; Romaña, Christina A

2017-01-01

In the Tapajós River region of the Brazilian Amazon, mercury (Hg) is a prevalent contaminant in the aquatic ecosystem. Few studies have used comprehensive chronological analyses to examine the combined effects of environmental and anthropogenic factors on Hg accumulation in sediments. Total mercury (THg) content was measured in sediments from eight floodplain lakes and Pb 210 isotope analysis was used to develop a timeline of THg accumulation. Secondary data representing environmental and anthropogenic factors were analyzed using geo-spatial analyses. These include land-cover change, hydrometeorological time-series data, lake morphology, and watershed biophysical characteristics. The results indicate that THg accumulation and sedimentation rates have increased significantly at the surface of most sediment cores, sometimes doubling since the 1970s. Human-driven land-cover changes in the watershed correspond closely to these shifts. Tropical deforestation enhances erosion, thereby mobilizing the heavy metal that naturally occurs in soils. Environmental factors also contribute to increased THg content in lacustrine sediments. Climate shifts since the 1980s are further compounding erosion and THg accumulation in surface sediments. Furthermore, variations in topography, soil types, and the level of hydrological connectivity between lakes and the river explain observed variations in THg fluxes and sedimentation. Although connectivity naturally varies among sampled lakes, deforestation of sensitive floodplain vegetation has changed lake-river hydrology in several sites. In conclusion, the results point to a combination of anthropogenic and environmental factors as determinants of increased THg accumulation in tropical floodplain sediments in the Tapajós region.

Concentration, distribution, and translocation of mercury and methylmercury in mine-waste, sediment, soil, water, and fish collected near the Abbadia San Salvatore mercury mine, Monte Amiata district, Italy

USGS Publications Warehouse

Rimondi, V.; Gray, J.E.; Costagliola, P.; Vaselli, O.; Lattanzi, P.

2012-01-01

The distribution and translocation of mercury (Hg) was studied in the Paglia River ecosystem, located downstream from the inactive Abbadia San Salvatore mine (ASSM). The ASSM is part of the Monte Amiata Hg district, Southern Tuscany, Italy, which was one of the world’s largest Hg districts. Concentrations of Hg and methyl-Hg were determined in mine-waste calcine (retorted ore), sediment, water, soil, and freshwater fish collected from the ASSM and the downstream Paglia River. Concentrations of Hg in calcine samples ranged from 25 to 1500 μg/g, all of which exceeded the industrial soil contamination level for Hg of 5 μg/g used in Italy. Stream and lake sediment samples collected downstream from the ASSM ranged in Hg concentration from 0.26 to 15 μg/g, of which more than 50% exceeded the probable effect concentration for Hg of 1.06 μg/g, the concentration above which harmful effects are likely to be observed in sediment-dwelling organisms. Stream and lake sediment methyl-Hg concentrations showed a significant correlation with TOC indicating considerable methylation and potential bioavailability of Hg. Stream water contained Hg as high as 1400 ng/L, but only one water sample exceeded the 1000 ng/L drinking water Hg standard used in Italy. Concentrations of Hg were elevated in freshwater fish muscle samples and ranged from 0.16 to 1.2 μg/g (wet weight), averaged 0.84 μg/g, and 96% of these exceeded the 0.3 μg/g (methyl-Hg, wet weight) USEPA fish muscle standard recommended to protect human health. Analysis of fish muscle for methyl-Hg confirmed that > 90% of the Hg in these fish is methyl-Hg. Such highly elevated Hg concentrations in fish indicated active methylation, significant bioavailability, and uptake of Hg by fish in the Paglia River ecosystem. Methyl-Hg is highly toxic and the high Hg concentrations in these fish represent a potential pathway of Hg to the human food chain.

Unlocking the Barite Paleoproductivity Proxy: Using a New Barite Extraction Method to Understand Productivity Trends During the Eocene Greenhouse

NASA Astrophysics Data System (ADS)

House, B. M.; Norris, R. D.

2017-12-01

The Early Eocene Climatic Optimum (EECO) around 50 Ma was a sustained period of extreme global warmth with ocean bottom water temperatures of up to 12° C. The marine biologic response to such climatic extremes is unclear, however, in part because proxies that integrate ecosystem-wide productivity signals are scarce. While the accumulation of marine barite (BaSO4) is one such proxy, its applicability has remained limited due to the difficulty in reliably quantifying barite. Discrete measurements of barite content in marine sediments are laborious, and indirect estimates provide unclear results. We have developed a fast, high-throughput method for reliable measurement of barite content that relies on selective extraction of barite rather than sample digestion and quantification of remaining barite. Tests of the new method reveal that it gives the expected results for a wide variety of sediment types and can quantitatively extract 10-100 times the amount of barite typically encountered in natural sediments. Altogether, our method provides an estimated ten-fold increase in analysis efficiency over current sample digestion methods and also works reliably on small ( 1 g or less) sediment samples. Furthermore, the instrumentation requirements of this method are minor, so samples can be analyzed in shipboard labs to generate real-time paleoproductivity records during coring expeditions. Because of the magnitude of throughput improvement, this new technique will permit the generation of large datasets needed to address previously intractable paleoclimate and paleoceanographic questions. One such question is how export productivity changes during climatic extremes. We used our new method to analyze globally distributed sediment cores to determine if the EECO represented a period of anomalous export productivity either due to higher rates of primary production or more vigorous heterotrophic metabolisms. An increase in export productivity could provide a mechanism for exiting periods of extreme warmth, and understanding the interplay between temperature, atmospheric CO2 levels, and export productivity during the EECO will help clarify how the marine biologic system functions as a whole.

Mechanistic Sediment Quality Guidelines Based on Contaminant Bioavailability: Equilibrium Partitioning Sediment Benchmarks

EPA Science Inventory

Globally, billions of metric tons of contaminated sediments are present in aquatic systems representing a potentially significant ecological risk. Estimated costs to manage (i.e., remediate and monitor) these sediments are in the billions of U.S. dollars. Biologically-based app...

Marine sediment-derived Streptomyces bacteria from British Columbia, Canada are a promising microbiota resource for the discovery of antimicrobial natural products.

PubMed

Dalisay, Doralyn S; Williams, David E; Wang, Xiao Ling; Centko, Ryan; Chen, Jessie; Andersen, Raymond J

2013-01-01

Representatives of the genus Streptomyces from terrestrial sources have been the focus of intensive research for the last four decades because of their prolific production of chemically diverse and biologically important compounds. However, metabolite research from this ecological niche had declined significantly in the past years because of the rediscovery of the same bioactive compounds and redundancy of the sample strains. More recently, a new picture has begun to emerge in which marine-derived Streptomyces bacteria have become the latest hot spot as new source for unique and biologically active compounds. Here, we investigated the marine sediments collected in the temperate cold waters from British Columbia, Canada as a valuable source for new groups of marine-derived Streptomyces with antimicrobial activities. We performed culture dependent isolation from 49 marine sediments samples and obtained 186 Streptomyces isolates, 47 of which exhibited antimicrobial activities. Phylogenetic analyses of the active isolates resulted in the identification of four different clusters of bioactive Streptomyces including a cluster with isolates that appear to represent novel species. Moreover, we explored whether these marine-derived Streptomyces produce new secondary metabolites with antimicrobial properties. Chemical analyses revealed structurally diverse secondary metabolites, including four new antibacterial novobiocin analogues. We conducted structure-activity relationships (SAR) studies of these novobiocin analogues against methicillin-resistant Staphylococcus aureus (MRSA). In this study, we revealed the importance of carbamoyl and OMe moieties at positions 3" and 4" of novobiose as well as the hydrogen substituent at position 5 of hydroxybenzoate ring for the anti-MRSA activity. Changes in the substituents at these positions dramatically impede or completely eliminate the inhibitory activity of novobiocins against MRSA.

Incorporating Dine' Perspectives in Assessing Temporal and Spatial Changes of Contaminants after the Gold King Mine Spill in Navajo Agricultural Communities

NASA Astrophysics Data System (ADS)

Chief, K.; Beamer, P.; Ingram, J.; Billheimer, D.; Torabzadehkhorasani, E.; Settimo, A.; Ornelas, Y.

2017-12-01

On August 5, 2015, 3 million gallons of acid mine drainage was released from the Gold King Mine, eventually reaching the San Juan River on the Navajo Nation. Navajos have subsistence livelihoods and strong cultural and spiritual connections to the San Juan River. Building on established partnerships with the Navajo Nation, a team from the University of Arizona and Northern Arizona University held three public listening sessions and a People's Teach-in in three Navajo communities. Navajo representatives also came to the university to share their perspectives. The university team immersed themselves in cultural learning through community advisors who taught on traditional knowledge and ways of knowing. One response at the People's Teach-In was "The San Juan represents a male river in Diné culture. To me the river is a life giving force to the Diné people and ecosystems." This traditional knowledge informed the team on how to address the communities' concern of assessing the spatial and temporal changes of lead and arsenic from the Spill within one year. Focus groups were held to understand how people used the San Juan River and it revealed over 40 different activities besides recreation. River water and sediment, irrigation water and sediment, agricultural soil and well water were collected in November 2015, March and June 2016 and household samples in August 2016. In this talk, we will present water quality and sediment results of water samples collected along the San Juan River on the Navajo Nation. The results of this investigation will be used in the future to develop a community-based intervention, designed to: a) prevent potentially harmful exposures based on actual measured risk, and/or b) effectively communicate long-term risks from the Gold King Mine.

Chemical Characteristics of Seawater and Sediment in the Yap Trench

NASA Astrophysics Data System (ADS)

Ding, H.; Sun, C.; Yang, G.

2017-12-01

In June 2016, seawater samples at sediment-seawater interface and sediment samples were collected by the he Jiaolong, China's manned submersible, at four sampling sites located in the Yap Trench. Seawater samples from different depths of the trench were also collected by CTD. Chemical parameters, including pH, alkanility, concentrations of dissolved inorganic carbon, dissolved and total organic carbon, methane, dimethylsulfoniopropionate, nutrients, carbohydrates, and amino acids were analyzed in the seawater samples. Concentrations of total organic carbon, six constant elements and nine trace elements were determined in the sediment samples. All the vertical profiles of the chemical parameters in the seawater have unique characteristics. Our resluts also showed that the carbonate compensation depth (CCD) was between 4500 m and 5000 m in the trench. The hadal sediment at 6500 m depth under the CCD line was siliceous ooze favored for the burial of orgaic carbon, attributed to accumulation of surface sediment by gravity flow. The abyssal sediment at the 4500 m depth was calcareous ooze. Various microfossils, such as discoasters and diatoms, were identified in different sediment layers of the sediment samples.Based on the ratios of Fe/Al and Ti/Al, and the correlation between different elements, the sediment in the Yap Trench were derived from biogenic, terrestrial, volcanic and autogenic sources. The ratios of Ni/Co and V/Cr showed that the deposition environment of the trench should be oxidative, arributed to inflow of the Antractic bottom oxygen-rich seawater.The high concentraiont of Ca in the sediment from the station 371-Yap-S02 below 4 cm depth indicated that there was no large-scale volcanic eruption in the research area and the volcanic materials in the sediment might orginated from the Mariana Volcanic Arc, and the Carolyn Ridge has been slowly sinking on the east side of the trench due to plate subduction. This study is the first systematic study of chemical characteristics in the seawater and sediment of the Yap Trench.

Sediment Quality and Comparison to Historical Water Quality, Little Arkansas River Basin, South-Central Kansas, 2007

USGS Publications Warehouse

Juracek, Kyle E.; Rasmussen, Patrick P.

2008-01-01

The spatial and temporal variability in streambed-sediment quality and its relation to historical water quality was assessed to provide guidance for the development of total maximum daily loads and the implementation of best-management practices in the Little Arkansas River Basin, south-central Kansas. Streambed-sediment samples were collected at 26 sites in 2007, sieved to isolate the less than 63-micron fraction (that is, the silt and clay), and analyzed for selected nutrients (total nitrogen and total phosphorus), organic and total carbon, 25 trace elements, and the radionuclides beryllium-7, cesium-137, lead-210, and radium-226. At eight sites, streambed-sediment samples also were collected and analyzed for bacteria. Particulate nitrogen, phosphorus, and organic carbon concentrations in the streambed sediment varied substantially spatially and temporally, and positive correlations among the three constituents were statistically significant. Along the main-stem Little Arkansas River, streambed-sediment concentrations of particulate nitrogen and phosphorus generally were larger at and downstream from Alta Mills, Kansas. The largest particulate nitrogen concentrations were measured in samples collected in the Emma Creek subbasin and may be related to livestock and poultry production. The largest particulate phosphorus concentrations in the basin were measured in samples collected along the main-stem Little Arkansas River downstream from Alta Mills, Kansas. Particulate nitrogen, phosphorus, and organic carbon content in the water and streambed-sediment samples typically decreased as streamflow increased. This inverse relation may be caused by an increased contribution of sediment from channel-bank sources during high flows and (or) increased particle sizes transported by the high flows. Trace element concentrations in the streambed sediment varied from site to site and typically were less than threshold-effects guidelines for possible adverse biological effects. The largest copper, lead, silver, and zinc concentrations, measured for a sample collected from Sand Creek downstream from Newton, Kansas, likely were related to urban sources of contamination. Radionuclide activities and bacterial densities in the streambed sediment varied throughout the basin. Variability in the former may be indicative of subbasin differences in the contribution of sediment from surface-soil and channel-bank sources. Streambed sediment may be useful for reconnaissance purposes to determine sources of particulate nitrogen, phosphorus, organic carbon, and other sediment-associated constituents in the basin. If flow conditions prior to streambed-sediment sampling and during water-quality sampling are considered, it may be possible to use streambed sediment as an indicator of water quality for nitrogen, phosphorus, and organic carbon. Flow conditions affect sediment-associated constituent concentrations in streambed-sediment and water samples, in part, because the sources of sediment (surface soils, channel banks) can vary with flow as can the size of the particles transported.

Neodymium Isotope Variations in Late Quaternary Carbonate Lake Sediments, Owens Valley, Eastern California.

NASA Astrophysics Data System (ADS)

Minervini, J. M.; Stewart, B. W.

2001-12-01

Owens Lake is situated in a mostly-closed basin fed by water and sediments derived primarily from the eastern Sierra Nevada range. Chemical and sedimentological variations in USGS Owens Lake Core OL-92, which extends back 800 ka, have been shown to be sensitive tracers of Great Basin paleoclimate. Here we report preliminary neodymium (Nd) isotope data from core OL-92 to investigate sediment provenance, the chemical behavior of rare earth elements (REE) in non-marine systems, and possible climate-related shifts in weathering patterns of the eastern Sierra Nevada during the last glacial-interglacial transition. Neodymium isotopic analyses were carried out on the carbonate fraction of sediment samples ranging in age from 16.8 to 6.9 ka from Owens Lake core OL-92. Samples were treated with ammonium acetate to remove exchangeable cations from coexisting silicate material, and subsequently leached with 8% acetic acid to dissolve carbonate minerals. Based on the mass of sediment leached with acetic acid, the fraction of carbonate (relative to clastic silicate material) increases from 6.6 to 66.5% over the 10 ka period represented by these samples. This increase in carbonate reflects desiccation of the Owens Lake basin; as streamwater flow is reduced, the lake spends a greater proportion of its time saturated in carbonate minerals, and clastic input might also be reduced. Concentrations of Nd in Owens Lake carbonate range from 7 to 170 ppm, values that are 2-1000 times higher than marine planktonic foraminifera (e.g., Vance and Burton, 1999, EPSL 173, 365). In general, high concentrations of Nd in Owens Lake carbonate are associated with older sediment samples with lower carbonate fractions. The decrease in Nd concentration over this time period could be a result of extraction of Nd from lake waters by precipitation of carbonate as desiccation proceeded. Epsilon-Nd values of Owens Lake carbonate range from -5.3 to -6.5, and are consistent with eastern Sierra Nevada granitic bedrock values. A slight shift from higher to lower epsilon-Nd values occurs between about 14 and 9 ka, and could be due to variations in sediment source regions associated with the retreat of alpine glaciers along the eastern flank of the Sierra Nevada. With ongoing studies to assess the relationship between clastic and carbonate sources, neodymium isotope data can potentially provide detailed information about the relationship between chemical and mechanical weathering processes in a well-constrained continental setting.

Sediment toxicity assessment in the Lagoon of Venice (Italy) using Paracentrotus lividus (Echinodermata: Echinoidea) fertilization and embryo bioassays.

PubMed

Volpi Ghirardini, A; Arizzi Novelli, A; Tagliapietra, D

2005-09-01

The capacity of two toxicity bioassays (fertilization and embryo toxicity tests) to discriminate sediment toxicity using the sea urchin Paracentrotus lividus was tested in five stations with different levels of pollution in the Lagoon of Venice. Two stations were located in estuarine sites, two in the industrial zone, and one in a site at the top of our quality gradient (reference). Elutriate was chosen as sediment matrix to assess the potential effects of bioavailable pollutants in the water column as a consequence of sediment resuspension (dredging and dumping, fishing gear, etc.). An experimental design based on Quality Assurance/Quality Control procedures (QA/QC) was adopted in order to set the methodological basis for an effective use of these bioassays in monitoring programs. Results revealed both higher embriotoxicity than spermiotoxicity in all stations and the efficacy of combined use of both toxicity bioassays in discriminating differing pollution/bioavailability between stations and periods. The good representativeness of the integrated sampling scheme and the standardization of all experimental phases yielded high precision of results. Clear Toxicity Fingerprints were evidenced for the investigated sites through the combined use of both bioassays. A good fit between ecotoxicological data and chemical contamination levels was found, except for unnatural sediment texture.

Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling.

PubMed

Schuck, P

2000-03-01

A new method for the size-distribution analysis of polymers by sedimentation velocity analytical ultracentrifugation is described. It exploits the ability of Lamm equation modeling to discriminate between the spreading of the sedimentation boundary arising from sample heterogeneity and from diffusion. Finite element solutions of the Lamm equation for a large number of discrete noninteracting species are combined with maximum entropy regularization to represent a continuous size-distribution. As in the program CONTIN, the parameter governing the regularization constraint is adjusted by variance analysis to a predefined confidence level. Estimates of the partial specific volume and the frictional ratio of the macromolecules are used to calculate the diffusion coefficients, resulting in relatively high-resolution sedimentation coefficient distributions c(s) or molar mass distributions c(M). It can be applied to interference optical data that exhibit systematic noise components, and it does not require solution or solvent plateaus to be established. More details on the size-distribution can be obtained than from van Holde-Weischet analysis. The sensitivity to the values of the regularization parameter and to the shape parameters is explored with the help of simulated sedimentation data of discrete and continuous model size distributions, and by applications to experimental data of continuous and discrete protein mixtures.

Characterization of the quality of water, bed sediment, and fish in Mittry Lake, Arizona, 2014–15

USGS Publications Warehouse

Hermosillo, Edyth; Coes, Alissa L.

2017-03-01

Water, bed-sediment, and fish sampling was conducted in Mittry Lake, Arizona, in 2014–15 to establish current water-quality conditions of the lake. The parameters of temperature, dissolved-oxygen concentration, specific conductance, and alkalinity were measured in the field. Water samples were collected and analyzed for dissolved major ions, dissolved trace elements, dissolved nutrients, dissolved organic carbon, dissolved pesticides, bacteria, and suspended-sediment concentrations. Bed-sediment and fish samples were analyzed for trace elements, halogenated compounds, total mercury, and methylmercury.U.S. Environmental Protection Agency secondary maximum contaminant levels in drinking water were exceeded for sulfate, chloride, and manganese in the water samples. Trace-element concentrations were relatively similar between the inlet, middle, and outlet locations. Concentrations for nutrients in all water samples were below the Arizona Department of Environmental Quality’s water-quality standards for aquatic and wildlife uses, and all bacteria levels were below the Arizona Department of Environmental Quality’s recommended recreational water-quality criteria. Three out of 81 pesticides were detected in the water samples.Trace-element concentrations in bed sediment were relatively consistent between the inlet, middle, and outlet locations. Lead, manganese, nickel, and zinc concentrations, however, decreased from the inlet to outlet locations. Concentrations for lead, nickel, and zinc in some bed-sediment samples exceeded consensus-based sediment-quality guidelines probable effect concentrations. Eleven out of 61 halogenated compounds were detected in bed sediment at the inlet location, whereas three were detected at the middle location, and five were detected at the outlet location. No methylmercury was detected in bed sediment. Total mercury was detected in bed sediment at concentrations below the consensus-based sediment-quality guidelines probable effect concentration.Sixteen trace elements were detected in at least one of the fish-tissue samples, and trace-element concentrations were relatively consistent between the three fish-tissue samples. Seven halogenated compounds were detected in at least one of the whole-body fish samples; four to five compounds were detected in each fish. One fish-tissue sample exceeded the U.S. Environmental Protection Agency human health consumption criteria for methylmercury.

Determining the sources of fine-grained sediment using the Sediment Source Assessment Tool (Sed_SAT)

USGS Publications Warehouse

Gorman Sanisaca, Lillian E.; Gellis, Allen C.; Lorenz, David L.

2017-07-27

A sound understanding of sources contributing to instream sediment flux in a watershed is important when developing total maximum daily load (TMDL) management strategies designed to reduce suspended sediment in streams. Sediment fingerprinting and sediment budget approaches are two techniques that, when used jointly, can qualify and quantify the major sources of sediment in a given watershed. The sediment fingerprinting approach uses trace element concentrations from samples in known potential source areas to determine a clear signature of each potential source. A mixing model is then used to determine the relative source contribution to the target suspended sediment samples.The computational steps required to apportion sediment for each target sample are quite involved and time intensive, a problem the Sediment Source Assessment Tool (Sed_SAT) addresses. Sed_SAT is a user-friendly statistical model that guides the user through the necessary steps in order to quantify the relative contributions of sediment sources in a given watershed. The model is written using the statistical software R (R Core Team, 2016b) and utilizes Microsoft Access® as a user interface but requires no prior knowledge of R or Microsoft Access® to successfully run the model successfully. Sed_SAT identifies outliers, corrects for differences in size and organic content in the source samples relative to the target samples, evaluates the conservative behavior of tracers used in fingerprinting by applying a “Bracket Test,” identifies tracers with the highest discriminatory power, and provides robust error analysis through a Monte Carlo simulation following the mixing model. Quantifying sediment source contributions using the sediment fingerprinting approach provides local, State, and Federal land management agencies with important information needed to implement effective strategies to reduce sediment. Sed_SAT is designed to assist these agencies in applying the sediment fingerprinting approach to quantify sediment sources in the sediment TMDL framework.

Assessing sediments from Upper Mississippi River navigational pools using a benthic invertebrate community evaluation and the sediment quality triad approach

USGS Publications Warehouse

Canfield, T.J.; Brunson, E.L.; Dwyer, F.J.; Ingersoll, C.G.; Kemble, N.E.

1998-01-01

Benthic invertebrate samples were collected from 23 pools in the Upper Mississippi River (UMR) and from one station in the Saint Croix River (SCR) as part of a study to assess the effects of the extensive flooding of 1993 on sediment contamination in the UMR system. Sediment contaminants of concern included both organic and inorganic compounds. Oligochaetes and chironomids constituted over 80% of the total abundance in samples from 14 of 23 pools in the UMR and SCR samples. Fingernail clams comprised a large portion of the community in three of 23 UMR pools and exceeded abundances of 1,000/m2 in five of 23 pools. Total abundance ranged from 250/m2 in samples from pool 1 to 22,389/m2 in samples from pool 19. Abundance values are comparable with levels previously reported in the literature for the UMR. Overall frequency of chironomid mouthpart deformities was 3% (range 0-13%), which is comparable to reported incidence of deformities in uncontaminated sediments previously evaluated. Sediment contamination was generally low in the UMR pools and the SCR site. Correlations between benthic measures and sediment chemistry and other abiotic parameters exhibited few significant or strong correlations. The sediment quality triad (Triad) approach was used to evaluate data from laboratory toxicity tests, sediment chemistry, and benthic community analyses; it showed that 88% of the samples were not scored as impacted based on sediment toxicity, chemistry, and benthic measures. Benthic invertebrate distributions and community structure within the UMR in the samples evaluated in the present study were most likely controlled by factors independent of contaminant concentrations in the sediments.

The Origin of EM1 Signatures in Basalts From Tristan da Cunha and Gough

NASA Astrophysics Data System (ADS)

Stracke, A.; Willbold, M.; Hemond, C.

2004-12-01

A long-standing hypothesis is that enriched mantle 1 (EM-1)-type ocean island basalt (OIB) sources contain pelagic sediments. Pelagic sediments range in composition from clays to calcareous or siliceous oozes and encompass a wide range of chemical compositions [1]. For geochemical purposes the use of the term pelagic sediments is often restricted to a special group of pelagic sediments with distinctive enrichment of Rare Earth Elements (REE). The geochemical composition of such REE-enriched pelagic sediments, however, is by no means representative of the geochemical composition of pelagic sediments in general. The extremely high REE/non-REE element ratios in REE-enriched pelagic sediments (e.g. high Lu/Hf, Sm/Hf, La/Nb, La/Th, Eu/Ti, and Gd/Ti ratios) translate into high 176Hf/177Hf ratios for given 143Nd/144Nd ratios with time. OIB sources containing this special variety of REE-enriched pelagic sediment should therefore plot above the oceanic basalt array and mixing arrays with these sources are expected to have a shallow slope in a Hf-Nd isotope diagram. Here we present new Hf-Nd isotope and trace element data for EM-1-type OIB from Tristan da Cunha and Gough in the South Atlantic Ocean. The samples from Tristan have a small range in Hf-Nd isotopic composition and plot within the oceanic basalt array in a Hf-Nd isotope diagram. Samples from Gough form a trend with a slope slightly steeper than that of the ocean basalt array in a Hf-Nd isotope diagram. OIB in general have a very restricted range in Gd/Ti and Sm/Hf ratios, and high La/Nb are associated with low Lu/Hf ratios. In detail, samples from Tristan and Gough have the lowest Lu/Hf and highest La/Nb ratios. Thus from the combined Hf-Nd isotope and trace element composition of basalts from Tristan and Gough involvement of this special variety of (REE-enriched) pelagic sediments can be excluded. Similar observations are made, and thus similar arguments hold, for other EM-1-type localities (Walvis ridge [2] and Pitcairn island [3]). Due to the considerable spread in geochemical composition of pelagic or any other group of sediments (e.g. marine sediments with a higher proportion of terrigenous components), it is difficult to attribute characteristic elemental or isotopic signatures to certain groups of sediment. Moreover, subducting sediments are complex mixtures of different types of sediment [1]. Thus it is difficult to find unique evidence either in favor of or against the involvement of sediments in general at Tristan and Gough, or any other individual OIB locality. Also, it appears highly unlikely that sub-arc processing has an equalizing effect on the composition of different subducting sediments [4]. Associating the similar isotopic characteristics of certain OIB groups and/or mantle-end-members (e.g. EM-1) to recycled sediments is therefore also problematic. [1] Plank, T. and C. H. Langmuir, Chem. Geol., 145, 325-394, 1998. [2] Salters, V. J. M. and X. Li, Geochim. Cosmochim. Acta, 68, A554, 2004. [3] Eisele, J., M. Sharma, J. G. Galer, J. Blichert-Toft, C. W. Devey and A. W. Hofmann, Earth Plan. Sci. Lett., 196, 197-212, 2002. [4] Johnson, M. C. and T. Plank, Geochem., Geophys., Geosys., 1, pp. 29, 1999.

The natural radioactivity measurements in coastal sediment samples along the East Coast of Tamilnadu using gamma spectrometry technique

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chandramohan, J.; Tholkappian, M.; Harikrishnan, N.

2015-08-28

The natural radioactivity concentration in beach sediment samples collected from Pattipulam to Devanampattinam of East Coast of Tamilnadu have been determined by NaI (TI) gamma ray spectrometer. The specific activity concentrations range from ≤ 2.21 (BDL) to 37.02 Bq kg{sup −1} with a mean of 3.79 Bqkg{sup −1} for {sup 238}U, ≤ 2.11 (BDL) to 643.77 Bqkg{sup −1} with a mean of 49.60 Bqkg{sup −1} for {sup 232}Th and 300.34 Bqkg{sup −1} to 449.08 Bqkg{sup −1} with a mean of 360.23 Bqkg{sup −1} for {sup 40}K. The potential radiological hazards due to natural radionuclides content such as Radium Equivalent activitymore » (Ra{sub eq}), Representative level index (RLI), External hazard index (H{sub ex}), absorbed gamma does rate (D{sub R}), and Annual effective dose rate (AEDR) are estimated to assess the radiation hazard associated with the sediments. The obtained data are compared with the recommended safety limits and international approved values. All the values are well below the recommended safety limits indicating that radiation levels do not poses any significant health hazard to the public in the area as a result of the natural radioactivity of beach sediments. This study may help the baseline data for more extensive works in the same subjects of future studies.« less

Inferring sources of polycyclic aromatic hydrocarbons (PAHs) in sediments from the western Taiwan Strait through end-member mixing analysis.

PubMed

Li, Tao; Sun, Guihua; Ma, Shengzhong; Liang, Kai; Yang, Chupeng; Li, Bo; Luo, Weidong

2016-11-15

Concentration, spatial distribution, composition and sources of polycyclic aromatic hydrocarbons (PAHs) were investigated based on measurements of 16 PAH compounds in surface sediments of the western Taiwan Strait. Total PAH concentrations ranged from 2.41 to 218.54ngg -1 . Cluster analysis identified three site clusters representing the northern, central and southern regions. Sedimentary PAHs mainly originated from a mixture of pyrolytic and petrogenic in the north, from pyrolytic in the central, and from petrogenic in the south. An end-member mixing model was performed using PAH compound data to estimate mixing proportions for unknown end-members (i.e., extreme-value sample points) proposed by principal component analysis (PCA). The results showed that the analyzed samples can be expressed as mixtures of three end-members, and the mixing of different end-members was strongly related to the transport pathway controlled by two currents, which alternately prevail in the Taiwan Strait during different seasons. Copyright © 2016. Published by Elsevier Ltd.

Mercury, methylmercury, and other constituents in sediment and water from seasonal and permanent wetlands in the Cache Creek settling basin and Yolo Bypass, Yolo County, California, 2005-06

USGS Publications Warehouse

Marvin-DiPasquale, Mark; Alpers, Charles N.; Fleck, Jacob A.

2009-01-01

This report presents surface water and surface (top 0-2 cm) sediment geochemical data collected during 2005-2006, as part of a larger study of mercury (Hg) dynamics in seasonal and permanently flooded wetland habitats within the lower Sacramento River basin, Yolo County, California. The study was conducted in two phases. Phase I represented reconnaissance sampling and included three locations within the Cache Creek drainage basin; two within the Cache Creek Nature Preserve (CCNP) and one in the Cache Creek Settling Basin (CCSB) within the creek's main channel near the southeast outlet to the Yolo Bypass. Two additional downstream sites within the Yolo Bypass Wildlife Area (YBWA) were also sampled during Phase I, including one permanently flooded wetland and one seasonally flooded wetland, which had began being flooded only 1–2 days before Phase I sampling.Results from Phase I include: (a) a negative correlation between total mercury (THg) and the percentage of methylmercury (MeHg) in unfiltered surface water; (b) a positive correlation between sediment THg concentration and sediment organic content; (c) surface water and sediment THg concentrations were highest at the CCSB site; (d) sediment inorganic reactive mercury (Hg(II)R) concentration was positively related to sediment oxidation-reduction potential and negatively related to sediment acid volatile sulfur (AVS) concentration; (e) sediment Hg(II)R concentrations were highest at the two YBWA sites; (f) unfiltered surface water MeHg concentration was highest at the seasonal wetland YBWA site, and sediment MeHg was highest at the permanently flooded YBWA site; (g) a 1,000-fold increase in sediment pore water sulfate concentration was observed in the downstream transect from the CCNP to the YBWA; (h) low sediment pore water sulfide concentrations (<1 µmol/L) across all sites; and (i) iron (Fe) speciation data suggest a higher potential for microbial Fe(III)-reduction in the YBWA compared to the CCSB.Phase II sampling did not include the original three Cache Creek sites, but instead focused on the original two sites within the YBWA and a similarly paired set of seasonally and permanently flooded wetland sites within the CCSB. Sediment sampling at the YBWA and CCSB occurred approximately 28 days and 52 days, respectively, after the initial flooding of the respective seasonal wetlands, and again towards the end of the seasonal flooding period (end of May 2006). Results from Phase II sampling include: (a) sediment MeHg concentration and the percentage of THg as MeHg (%MeHg) in unfiltered surface waters were generally higher in the YBWA compared to the CCSB; (b) suspended sediment concentration (SCC) in surface water was positively correlated with both THg and MeHg in unfiltered water across all sites, although the relationship between SCC and MeHg differed for the two regions, suggesting local MeHg sources; (c) MeHg concentration in unfiltered surface water was positively correlated to sediment MeHg concentrations across all sites, supporting the suggestion of unique local (sediment) sources of MeHg to the water column; (d) THg concentration in filtered water was positively correlated with both total Fe and dissolved organic carbon (DOC), offering additional support for the role of these constituents in the partitioning of THg between particulate and dissolved phases; (e) flooding of the YBWA seasonal wetland resulted in a rapid and significant (5-fold) rise in sediment MeHg concentration within 3–4 weeks following inundation; and (f) temporal changes in sediment S and Fe speciation suggest that rates of both microbial sulfate reduction and Fe(III)-reduction were significantly higher at YBWA, compared to CCSB, during the period between flooding and drying.The geochemical data presented in this report indicate that (a) strong spatial and temporal differences in Hg speciation and transformations can occur within the range of wetland habitats found in the lower Sacramento River basin; (b) flooding of seasonal wetlands can be accompanied by a rapid increase in benthic MeHg production and the release of previously formed MeHg (generated during or since the previous flooding season) to the overlying water column; (c) S and Fe chemistry, and associated microbial reduction pathways, play an important role in mediating the speciation and transformation of Hg in these wetland habitats; (d) hydroperiod is a primary forcing function in mediating MeHg production among various wetland types; and (e) MeHg production appears to be more active in the YBWA compared to the CCSB.

Bioavailability and Methylation Potential of Mercury Sulfides in Sediments

DTIC Science & Technology

2014-08-01

such as size separation (i.e. filtration with a particular pore size or molecular weight cutoff) or metal-ligand complexation from experimentally ...and 6 nM HgS microparticles. The error bars represent ±1 s.d. for duplicate samples. Results of Hg fractionation by filtration and (ultra... results from filtration (Figures S2). These differences in the data indicated that the nHgS dissolution rate could be overestimated by the filtration data

Organic waste compounds in streams: Occurrence and aquatic toxicity in different stream compartments, flow regimes, and land uses in southeast Wisconsin, 2006–9

USGS Publications Warehouse

Baldwin, Austin K.; Corsi, Steven R.; Richards, Kevin D.; Geis, Steven W.; Magruder, Christopher

2013-01-01

An assessment of organic chemicals and aquatic toxicity in streams located near Milwaukee, Wisconsin, indicated high potential for adverse impacts on aquatic organisms that could be related to organic waste compounds (OWCs). OWCs used in agriculture, industry, and households make their way into surface waters through runoff, leaking septic-conveyance systems, regulated and unregulated discharges, and combined sewage overflows, among other sources. Many of these compounds are toxic at elevated concentrations and (or) known to have endocrine-disrupting potential, and often they occur as complex mixtures. There is still much to be learned about the chronic exposure effects of these compounds on aquatic populations. During 2006–9, the U.S. Geological Survey, in cooperation with the Milwaukee Metropolitan Sewerage District (MMSD), conducted a study to determine the occurrence and potential toxicity of OWCs in different stream compartments and flow regimes for streams in the Milwaukee area. Samples were collected at 17 sites and analyzed for a suite of 69 OWCs. Three types of stream compartments were represented: water column, streambed pore water, and streambed sediment. Water-column samples were subdivided by flow regime into stormflow and base-flow samples. One or more compounds were detected in all 196 samples collected, and 64 of the 69 compounds were detected at least once. Base-flow samples had the lowest detection rates, with a median of 12 compounds detected per sample. Median detection rates for stormflow, pore-water, and sediment samples were more than double that of base-flow samples. Compounds with the highest detection rates include polycyclic aromatic hydrocarbons (PAHs), insecticides, herbicides, and dyes/pigments. Elevated occurrence and concentrations of some compounds were detected in samples from urban sites, as compared with more rural sites, especially during stormflow conditions. These include the PAHs and the domestic waste-water-indicator compounds, among others. Urban runoff and storm-related leaks of sanitary sewers and (or) septic systems may be important sources of these and other compounds to the streams. The Kinnickinnic River, a highly urbanized site, had the highest detection rates and concentrations of compounds of all the sampled sites. The Milwaukee River near Cedarburg—one of the least urban sites—and the Outer Milwaukee Harbor site had the lowest detection rates and concentrations. Aquatic-toxicity benchmarks were exceeded for 12 of the 25 compounds with known benchmarks. The compounds with the greatest benchmark exceedances were the PAHs, both in terms of exceedance frequency (up to 93 percent for some compounds in sediment samples) and magnitude (concentrations up to 1,024 times greater than the benchmark value). Other compounds with toxicity-benchmark exceedances include Bis(2-ethylhexyl) phthalate (a plasticizer), 2-Methylnapthalene (a component of fuel and oil), phenol (an antimicrobial disinfectant with diverse uses), and 4-Nonylphenol (sum of all isomers; a detergent metabolite, among other uses). Analyzed as a mixture, the suite of PAH compounds were found to be potentially toxic for most non-base-flow samples. Bioassay tests were conducted on samples from 14 streams: Ceriodaphnia dubia in base-flow samples, Ceriodaphnia dubia and Hyallela azteca in pore-water samples, and Hyallela azteca and Chironomus tentans in sediment samples. The greatest adverse effect was observed in tests with Chironomus tentans from sediment samples. The weight of Chironomus tentans after exposure to sediments decreased with increased OWC concentrations. This was most evident in the relation between PAH results and Chironomus tentans bioassay results for the majority of samples; however, solvents and flame retardants appeared to be important for one site each. These results for PAHs were consistent with assessment of PAH potency factors for sediment, indicating that PAHs were likely to have adverse effects on aquatic organisms in many of the streams studied.

Field Evaluation of a Coproantigen Detection Test for Fascioliasis Diagnosis and Surveillance in Human Hyperendemic Areas of Andean Countries

PubMed Central

Valero, María Adela; Periago, María Victoria; Pérez-Crespo, Ignacio; Angles, René; Villegas, Fidel; Aguirre, Carlos; Strauss, Wilma; Espinoza, José R.; Herrera, Patricia; Terashima, Angelica; Tamayo, Hugo; Engels, Dirk; Gabrielli, Albis Francesco; Mas-Coma, Santiago

2012-01-01

Background Emergence of human fascioliasis prompted a worldwide control initiative including a pilot study in a few countries. Two hyperendemic areas were chosen: Huacullani, Northern Altiplano, Bolivia, representing the Altiplanic transmission pattern with high prevalences and intensities; Cajamarca valley, Peru, representing the valley pattern with high prevalences but low intensities. Coprological sample collection, transport and study procedures were analyzed to improve individual diagnosis and subsequent treatments and surveillance activities. Therefore, a coproantigen-detection technique (MM3-COPRO ELISA) was evaluated, using classical techniques for egg detection for comparison. Methodology and Findings A total of 436 and 362 stool samples from schoolchildren of Huacullani and Cajamarca, respectively, were used. Positive samples from Huacullani were 24.77% using the MM3-COPRO technique, and 21.56% using Kato-Katz. Positive samples from Cajamarca were 11.05% using MM3-COPRO, and 5.24% using rapid sedimentation and Kato-Katz. In Huacullani, using Kato-Katz as gold standard, sensitivity and specificity were 94.68% and 98.48%, respectively, and using Kato-Katz and COPRO-ELISA test together, they were 95.68% and 100%. In Cajamarca, using rapid sedimentation and Kato-Katz together, results were 94.73% and 93.58%, and using rapid sedimentation, Kato-Katz and copro-ELISA together, they were 97.56% and 100%, respectively. There was no correlation between coproantigen detection by optical density (OD) and infection intensity by eggs per gram of feces (epg) in Cajamarca low burden cases (<400 epg), nor in Huacullani high burden cases (≥400 epg), although there was in Huacullani low burden cases (<400 epg). Six cases of egg emission appeared negative by MM3-COPRO, including one with a high egg count (1248 epg). Conclusions The coproantigen-detection test allows for high sensitivity and specificity, fast large mass screening capacity, detection in the chronic phase, early detection of treatment failure or reinfection in post-treated subjects, and usefulness in surveillance programs. However, this technique falls short when evaluating the fluke burden on its own. PMID:23029575

Storage and residence time of suspended sediment in gravel bars of Difficult Run, VA

NASA Astrophysics Data System (ADS)

George, J.; Benthem, A.; Pizzuto, J. E.; Skalak, K.

2016-12-01

Reducing the export of suspended sediment is an important consideration for restoring water quality to the Chesapeake Bay, but sediment budgets for in-channel landforms are poorly constrained. We quantified fine (< 2 mm) sediment storage and residence times for gravel bars at two reaches along Difficult Run, a 5th order tributary to the Potomac River. Eight gravel bars were mapped in a 150m headwater reach at Miller Heights (bankfull width 11m; total bar volume 114 m3) and 6 gravel bars were mapped in a 160m reach downstream near Leesburg Pike (bankfull width 19m; total bar volume 210 m3). Grain size analyses of surface and subsurface samples from 2 bars at each reach indicate an average suspended sediment content of 55%, suggesting a total volume of suspended sediment stored in the mapped bars to be 178 m3, or 283000 kg, comprising 5% of the average annual suspended sediment load of the two study reaches. Estimates of the annual bedload flux at Miller Heights based on stream gaging records and the Wilcock-Crowe bedload transport equation imply that the bars are entirely reworked at least annually. Scour chains installed in 2 bars at each site (a total of 50 chains) recorded scour and fill events during the winter and spring of 2016. These data indicate that 38% of the total volume of the bars is exchanged per year, for a residence time of 2.6 ± 1.2 years, a value we interpret as the residence time of suspended sediment stored in the bars. These results are supported by mapping of topographic changes derived from structure-from-motion analyses of digital aerial imagery. Storage in alluvial bars therefore represents a significant component of the suspended sediment budget of mid-Atlantic streams.

The role of impoundments in the sediment budget of the conterminous United States

USGS Publications Warehouse

Renwick, W.H.; Smith, S.V.; Bartley, J.D.; Buddemeier, R.W.

2005-01-01

Previous work on sediment budgets for U.S. agricultural regions has concluded that most sediment derived from accelerated erosion is still on the landscape, primarily in colluvial and alluvial deposits. Here we examine the role of small impoundments in the subcontinental sediment budget. A recent inventory based on a 30-m satellite imagery reveals approximately 2.6 million ponds, while extrapolation from a sample of 1:24,000 topographic quadrangles suggests the total may be as large as 8-9 million. These ponds capture an estimated 21% of the total drainage area of the conterminous U.S., representing 25% of total sheet and rill erosion. We estimate the total sedimentation in these small impoundments using three different methods; these estimates range from 0.43 to 1.78 ?? 109 m3 yr-1. Total sedimentation in ???43,000 reservoirs from the National Inventory of Dams is estimated at 1.67 ?? 109 m3 yr-1. Total USLE erosion in 1992 was 2.4 ?? 109 m3 yr-1, and export to coastal areas is estimated at 0.6 ?? 109 m3 yr-1. Total sedimentation in impoundments is large in relation to upland erosion, in apparent contradiction to previous studies that have identified colluvial and alluvial deposition as the primary sinks. Several alternative hypotheses that could help explain this result are proposed. Regardless of which of these alternatives may prove to be the most significant in any given setting, it is clear that most sedimentation is now taking place in subaqueous rather than subaerial environments, and that small impoundments are a major sediment sink. ?? 2005 Elsevier B.V. All rights reserved.

Preliminary use of compound-specific stable isotope (CSSI) technique to identify and apportion sediment origin in a small Austrian catchment

NASA Astrophysics Data System (ADS)

Mabit, Lionel; Gibbs, Max; Chen, Xu; Meusburger, Katrin; Toloza, Arsenio; Resch, Christian; Klik, Andreas; Eder, Alexander; Strauss, Peter; Alewell, Christine

2015-04-01

The overall impacts of climate change on agriculture are expected to be negative, threatening global food security. In the agricultural areas of the European Union, water erosion risk is expected to increase by about 80% by the year 2050. Reducing soil erosion and sedimentation-related environmental problems represent a key requirement for mitigating the impact of climate change. A new forensic stable isotope technique, using the compound specific stable isotope (CSSI) signatures of inherent soil organic biomarkers, can discriminate and apportion the source soil contribution from different land uses. Plant communities label the soil where they grow by exuding organic biomarkers. Although all plants produce the same biomarkers, the stable isotopic signature of those biomarkers is different for each plant species. For agri-environmental investigation, the CSSI technique is based on the measurement of carbon-13 (13-C) natural abundance signatures of specific organic compounds such as natural fatty acids (FAs) in the soil. By linking fingerprints of land use to the sediment in deposition zones, this approach has been shown to be a useful technique for determining the source of eroded soil and thereby identifying areas prone to soil degradation. The authors have tested this innovative stable isotopic approach in a small Austrian agricultural catchment located 60 km north of Vienna. A previous fallout radionuclide (i.e. 137-Cs) based investigation established a sedimentation rate of 4 mm/yr in the lowest part of the study site. To gain knowledge about the origin of these sediments, the CSSI technique was then tested using representative samples from the different land-uses of the catchment as source material. Values of 13-C signatures of specific FAs (i.e. C22:0 = Behenic Acid ; C24:0 = Lignoceric Acid) and the bulk 13-C of the sediment mixture and potential landscape sources were analyzed with the mixing models IsoSource and CSSIAR v1.00. Using both mixing models, preliminary results highlighted that about 50-55% of the sediment located in the deposition area originated from the main grassed waterway of the catchment.

Crust And Upper Mantle Structure Of The Bengal Basin And Bay Of Bengal From Surface Wave Group Velocity Dispersion Studies

NASA Astrophysics Data System (ADS)

Dhali, K. K.; Majhi, S.; Mitra, S.; Priestley, K.

2007-12-01

Fundamental mode Rayleigh and Love wave group velocity dispersion for paths crossing the Bay of Bengal have been calculated for earthquakes in the Indo-Burman arc and the Andaman-Sumatra subduction zone recorded at seismographs in the eastern part of Peninsula India and Sri Lanka. The ray-path coverage in this study provides a better spatial sampling than any previous studies of the region. The individual dispersion curves range from 12 to 70~s and have been clustered in four spatial groups to form average dispersion curves representative of the Bengal basin, northern, central and southern Bay of Bengal. These average dispersion curves for Rayleigh and Love waves are jointly inverted to obtain shear wave velocity structure of the lithosphere. The higher frequencies/shorter periods (12--30~s) used in the inversion constrains the sediment shear wave speed and thickness while the longer periods provide information of the upper mantle structure. The results show a remarkable increase in the sediments thickness along the Bengal Fan from south to north ranging from 6 km, around the southern tip of India, to 23 km beneath the Bengal basin. The shear wave velocity models reveal a sediment saturation beyond 7-10 km of burial leading to metamorphism and eventual increase in velocity to continent like material with depth. The average crustal thickness (loose sediments overlying consolidated sediments followed by metasediments and oceanic crust) is anomalously continental (~20-36 km) rather than being simply oceanic crust overlain by sediments. The average shear wave velocity is about 3.5-3.8 km/s which is more representative of continental crusts. Finally the low velocity zone in the uppermost mantle is possibly an effect of the expected increase in temperature due to blanketing of the fan sediments over the Bay of Bengal crust. The misfits to parts of the dispersion data using a 1D isotropic model provides an indication of the presence of polarization anisotropy in the lithosphere and sets a good starting point for modeling the anisotropic structure.

Elevated in-home sediment contaminant concentrations - the consequence of a particle settling-winnowing process from Hurricane Katrina floodwaters.

PubMed

Ashley, Nicholas A; Valsaraj, Kalliat T; Thibodeaux, Louis J

2008-01-01

Sediment samples were collected from two homes which were flooded in the wake of Hurricane Katrina in August 2005. The samples were analyzed for trace metals and semi-volatile organic compounds using techniques based on established EPA methods. The data showed higher concentrations of some metals and semi-volatile organic pollutants than reported in previous outdoor sampling events of soils and sediments. The Lake Pontchartrain sediments became resuspended during the hurricane, and this material subsequently was found in the residential areas of New Orleans following levee breaches. The clay and silt particles appear to be selectively deposited inside homes, and sediment contaminant concentrations are usually greatest within this fraction. Re-entry advisories based on outdoor sample concentration results may have under-predicted the exposure levels to homeowners and first responders. All contaminants found in the sediment sampled in this study have their origin in the sediments of Lake Pontchartrain and other localized sources.

Results of sampling and analysis : preliminary sediment quality assessment Martha Lake Snohomish County Washington

DOT National Transportation Integrated Search

1995-10-18

This report presents the results of sediment sampling and analysis conducted in support of proposed dredging activities of Martha Lake Sediments. The characterization of the sediments will be used in support of permitting applications and exploring v...

A FIELD VALIDATION OF TWO SEDIMENT-AMPHIPOD TOXICITY TESTS

EPA Science Inventory

A field validation study of two sediment-amphipod toxicity tests was conducted using sediment samples collected subtidally in the vicinity of a polycyclic aromatic hydrocarbon (PAH)-contaminated Superfund site in Elliott Bay, WA, USA. Sediment samples were collected at 30 stati...

Mixed sand and gravel beaches: accurate measurement of active layer depth and sediment transport volumes using PIT tagged tracer pebbles

NASA Astrophysics Data System (ADS)

Holland, A.; Moses, C.; Sear, D. A.; Cope, S.

2016-12-01

As sediments containing significant gravel portions are increasingly used for beach replenishment projects globally, the total number of beaches classified as `mixed sand and gravel' (MSG) increases. Calculations for required replenishment sediment volumes usually assume a uniform layer of sediment transport across and along the beach, but research into active layer (AL) depth has shown variations both across shore and according to sediment size distribution. This study addresses the need for more accurate calculations of sediment transport volumes on MSG beaches by using more precise measurements of AL depth and width, and virtual velocity of tracer pebbles. Variations in AL depth were measured along three main profile lines (from MHWS to MLWN) at Eastoke, Hayling Island (Hampshire, UK). Passive Integrated Transponder (PIT) tagged pebbles were deployed in columns, and their new locations repeatedly surveyed with RFID technology. These data were combined with daily dGPS beach profiles and sediment sampling for detailed analysis of the influence of beach morphodynamics on sediment transport volumes. Data were collected over two consecutive winter seasons: 2014-15 (relatively calm, average wave height <1 m) and 2015-16 (prolonged periods of moderate storminess, wave heights of 1-2 m). The active layer was, on average, 22% of wave height where beach slope (tanβ) is 0.1, with variations noted according to slope angle, sediment distribution, and beach groundwater level. High groundwater levels and a change in sediment proportions in the sandy lower foreshore reduced the AL to 10% of wave height in this area. The disparity in AL depth across the beach profile indicates that traditional models are not accurately representing bulk sediment transport on MSG beaches. It is anticipated that by improving model inputs, beach managers will be better able to predict necessary volumes and sediment grain size proportions of replenishment material for effective management of MSG beaches.

Calibrating SALT: a sampling scheme to improve estimates of suspended sediment yield

Treesearch

Robert B. Thomas

1986-01-01

Abstract - SALT (Selection At List Time) is a variable probability sampling scheme that provides unbiased estimates of suspended sediment yield and its variance. SALT performs better than standard schemes which are estimate variance. Sampling probabilities are based on a sediment rating function which promotes greater sampling intensity during periods of high...

Sediment bacterial community structures and their predicted functions implied the impacts from natural processes and anthropogenic activities in coastal area.

PubMed

Su, Zhiguo; Dai, Tianjiao; Tang, Yushi; Tao, Yile; Huang, Bei; Mu, Qinglin; Wen, Donghui

2018-06-01

Coastal ecosystem structures and functions are changing under natural and anthropogenic influences. In this study, surface sediment samples were collected from disturbed zone (DZ), near estuary zone (NEZ), and far estuary zone (FEZ) of Hangzhou Bay, one of the most seriously polluted bays in China. The bacterial community structures and predicted functions varied significantly in different zones. Firmicutes were found most abundantly in DZ, highlighting the impacts of anthropogenic activities. Sediment total phosphorus was most influential on the bacterial community structures. Predicted by PICRUSt analysis, DZ significantly exceeded FEZ and NEZ in the subcategory of Xenobiotics Biodegradation and Metabolism; and DZ enriched all the nitrate reduction related genes, except nrfA gene. Seawater salinity and inorganic nitrogen, respectively as the representative natural and anthropogenic factor, performed exact-oppositely in nitrogen metabolism functions. The changes of bacterial community compositions and predicted functions provide a new insight into human-induced pollution impacts on coastal ecosystem. Copyright © 2018 Elsevier Ltd. All rights reserved.

Detrital Cr-spinel in the Šambron-Kamenica Zone (Slovakia): evidence for an ocean-spreading zone in the Northern Vardar suture?

NASA Astrophysics Data System (ADS)

Lenaz, Davide; Mazzoli, Claudio; Spišiak, Jan; Princivalle, Francesco; Maritan, Lara

2009-03-01

The Šambron-Kamenica Zone is situated on the northern margin of the Levočské vrchy mountains and Šarišskà vrchovina Highland, where the Central Carpathian Paleogene joins the Pieniny Klippen Belt. Sandstone outcrops in this area. From Cretaceous to Late Oligocene in age, these sediments suggest transport directions from S and SE. The heavy mineral assemblages of this sandstone include Cr-spinel grains, mainly displaying types II and III alpine-peridotite affinities, and are representative of Ocean Island Basalt volcanism. A sample from Upper Eocene sediments at Vit’az shows a clear change in Cr-spinel composition, which turns out to have types I and II peridotite affinities, and to derive from arc and Middle Ocean Ridge Basalt volcanism, with sediment transport directions from SW and WSW. These data indicate major variations in the Upper Eocene tectonic setting, giving constraints to paleogeographic reconstruction of the Slovak Central Carpathians.

Streamflow and suspended-sediment transport in Garvin Brook, Winona County, southeastern Minnesota: Hydrologic data for 1982

USGS Publications Warehouse

Payne, G.A.

1983-01-01

Streamflow and suspended-sediment-transport data were collected in Garvin Brook watershed in Winona County, southeastern Minnesota, during 1982. The data collection was part of a study to determine the effectiveness of agricultural best-management practices designed to improve rural water quality. The study is part of a Rural Clean Water Program demonstration project undertaken by the U.S. Department of Agriculture. Continuous streamflow data were collected at three gaging stations during March through September 1982. Suspended-sediment samples were collected at two of the gaging stations. Samples were collected manually at weekly intervals. During periods of rapidly changing stage, samples were collected at 30-minute to 12-hour intervals by stage-activated automatic samplers. The samples were analyzed for suspendedsediment concentration and particle-size distribution. Particlesize distributions were also determined for one set of bedmaterial samples collected at each sediment-sampling site. The streamflow and suspended-sediment-concentration data were used to compute records of mean-daily flow, mean-daily suspended-sediment concentration, and daily suspended-sediment discharge. The daily records are documented and results of analyses for particle-size distribution and of vertical sampling in the stream cross sections are given.

Microbial community composition and PAHs removal potential of indigenous bacteria in oil contaminated sediment of Taean coast, Korea.

PubMed

Lee, Dong Wan; Lee, Hanbyul; Lee, Aslan Hwanhwi; Kwon, Bong-Oh; Khim, Jong Seong; Yim, Un Hyuk; Kim, Beom Seok; Kim, Jae-Jin

2018-03-01

The tidal flats near Sinduri beach in Taean, Korea, have been severely contaminated by heavy crude oils due to the Korea's worst oil spill accident, say the Hebei Spirit Oil Spill, in 2007. Crude oil compounds, including polycyclic aromatic hydrocarbons (PAHs), pose significant environmental damages due to their wide distribution, persistence, high toxicity, mutagenicity, and carcinogenicity. Microbial community of Sinduri beach sediments samples was analyzed by metagenomic data with 16S rRNA gene amplicons. Three phyla (Proteobacteria, Firmicutes, and Bacteroidetes) accounted for approximately ≥93.0% of the total phyla based on metagenomic analysis. Proteobacteria was the dominant phylum in Sinduri beach sediments. Cultivable bacteria were isolated from PAH-enriched cultures, and bacterial diversity was investigated through performing culture characterization followed by molecular biology methods. Sixty-seven isolates were obtained, comprising representatives of Actinobacteria, Firmicutes, α- and γ-Proteobacteria, and Bacteroidetes. PAH catabolism genes, such as naphthalene dioxygenase (NDO) and aromatic ring hydroxylating dioxygenase (ARHDO), were used as genetic markers to assess biodegradation of PAHs in the cultivable bacteria. The ability to degrade PAHs was demonstrated by monitoring the removal of PAHs using a gas chromatography mass spectrometer. Overall, various PAH-degrading bacteria were widely present in Sinduri beach sediments and generally reflected the restored microbial community. Among them, Cobetia marina, Rhodococcus soli, and Pseudoalteromonas agarivorans were found to be significant in degradation of PAHs. This large collection of PAH-degrading strains represents a valuable resource for studies investigating mechanisms of PAH degradation and bioremediation in oil contaminated coastal environment, elsewhere. Copyright © 2017 Elsevier Ltd. All rights reserved.

Deep-Subsurface Marine Methane Hydrate Microbial Communities: Who's There and What Are They Doing?

NASA Astrophysics Data System (ADS)

Colwell, F.; Reed, D.; Fujita, Y.; Delwiche, M.; Blackwelder, D.; Uchida, T.; Fujii, T.; Lu, H.

2001-12-01

Natural gas hydrates are crystalline deposits of freshwater and primarily methane. They are estimated to represent a potentially vast reservoir of energy. Relatively little is known regarding microbial communities surrounding deep [>100 meters below sea floor (mbsf)] hydrate-bearing sediments. Deep sediment cores were collected in zones above, within, and below the hydrate bearing strata in an accretionary prism off the coast of Japan. Microorganisms were characterized using cultivation- and non-cultivation-based microbiological techniques to better understand the role that they play in the production and distribution of methane in gas hydrates. Direct counts show cell density at 105 cells/g throughout the hydrate strata. Lipid and 16S rDNA analyses indicate that diverse bacterial and archaeal microorganisms are represented throughout the strata. Acetate and hydrogen were utilized as an energy source for methane-producing microorganisms from each sediment depth. Although the methanogenic biomarker coenzyme M was not present above the detection limit in any of the samples, cloning and characterization of amplified 16S ribosomal RNA genes indicated the presence of methanogenic microorganisms related to the Methanobacteriales and Methanococcales. In addition, archaeal clones closely related to the hyperthermophilic Pyrodictiales were detected. Analysis of eubacterial clones indicated a more diverse eubacterial community compared to the archaea, including members from the groups of cyanobacteria, proteobacteria, gram positive bacteria, and flexibacter-cytophaga-bacteriodes. This study suggests that the diversity of microbial communities associated with the presence of methane in gas hydrate-rich deep marine sediments is greater than previously estimated.

Worldwide Diversity and Occurrence of Arsenite Transporter acr3(2) Suggests an Important and Overlooked Pathway

NASA Astrophysics Data System (ADS)

Mailloux, B. J.; Wagner, P.; Foster, R.; Stolz, J. F.; Scholz, M.; Wovkulich, K.; Freyer, G. A.

2009-12-01

Arsenic is a toxic element that occurs naturally in the environment. Microorganisms have detoxification pathways that involve the expulsion of arsenite from the cytoplasm. The genes encoding these processes, including acr3(2), have been well studied in laboratory. However, comparatively less is known of detoxification genes in the environment. Here we report on the environmental diversity of acr3(2), an arsenite transporter gene, in 15 samples from a variety of habitats, including 2 marine samples from near the Amazon River plume, 2 sediment samples from California Soda Lakes (Mono and Searle), 8 groundwater samples from Bangladesh, 1 sediment sample from Union Lake, NJ, and 2 microcosm experiments using sediment from the Vineland Chemical Co Superfund site, NJ amended with acetate and arsenate. These sites were chosen to represent a variety arsenic impacted environments. Aqueous concentrations of arsenic ranged from below 13 nM to 5.6 mM (1 ppb to 422 ppm). Fifteen clone libraries were generated, and the 304 unique sequences clustered with or near Proteobacteria, Cyanobacteria , Euryarchaeota (Archaea),Acidobacteria, Thermatogae (Archaea), Planctomycetes, Bacteroidetes and Firmicutes. Thus, the acr3(2) gene appears to be highly conserved worldwide and across the domains of Archaea and Bacteria. Comparison of clone libraries, however, indicated that individual sites had distinct communities. Rarefraction analysis and CHAO1 estimation of species richness showed that even with 1406 available acr sequences from JGI and this study, the known diversity of the gene is not saturated. These results suggests that the acr3(2) gene and detoxification in general may be more important than previously thought in environmental arsenic cycling and mobilization.

Sediment and water chemistry of the San Juan River and Escalante River deltas of Lake Powell, Utah, 2010-2011

USGS Publications Warehouse

Hornewer, Nancy J.

2014-01-01

Recent studies have documented the presence of trace elements, organic compounds including polycyclic aromatic hydrocarbons, and radionuclides in sediment from the Colorado River delta and from sediment in some side canyons in Lake Powell, Utah and Arizona. The fate of many of these contaminants is of significant concern to the resource managers of the National Park Service Glen Canyon National Recreation Area because of potential health impacts to humans and aquatic and terrestrial species. In 2010, the U.S. Geological Survey began a sediment-core sampling and analysis program in the San Juan River and Escalante River deltas in Lake Powell, Utah, to help the National Park Service further document the presence or absence of contaminants in deltaic sediment. Three sediment cores were collected from the San Juan River delta in August 2010 and three sediment cores and an additional replicate core were collected from the Escalante River delta in September 2011. Sediment from the cores was subsampled and composited for analysis of major and trace elements. Fifty-five major and trace elements were analyzed in 116 subsamples and 7 composited samples for the San Juan River delta cores, and in 75 subsamples and 9 composited samples for the Escalante River delta cores. Six composited sediment samples from the San Juan River delta cores and eight from the Escalante River delta cores also were analyzed for 55 low-level organochlorine pesticides and polychlorinated biphenyls, 61 polycyclic aromatic hydrocarbon compounds, gross alpha and gross beta radionuclides, and sediment-particle size. Additionally, water samples were collected from the sediment-water interface overlying each of the three cores collected from the San Juan River and Escalante River deltas. Each water sample was analyzed for 57 major and trace elements. Most of the major and trace elements analyzed were detected at concentrations greater than reporting levels for the sediment-core subsamples and composited samples. Low-level organochlorine pesticides and polychlorinated biphenyls were not detected in any of the samples. Only one polycyclic aromatic hydrocarbon compound was detected at a concentration greater than the reporting level for one San Juan composited sample. Gross alpha and gross beta radionuclides were detected at concentrations greater than reporting levels for all samples. Most of the major and trace elements analyzed were detected at concentrations greater than reporting levels for water samples.

Organic contaminants, trace and major elements, and nutrients in water and sediment sampled in response to the Deepwater Horizon oil spill

USGS Publications Warehouse

Nowell, Lisa H.; Ludtke, Amy S.; Mueller, David K.; Scott, Jonathon C.

2012-01-01

Beach water and sediment samples were collected along the Gulf of Mexico coast to assess differences in contaminant concentrations before and after landfall of Macondo-1 well oil released into the Gulf of Mexico from the sinking of the British Petroleum Corporation's Deepwater Horizon drilling platform. Samples were collected at 70 coastal sites between May 7 and July 7, 2010, to document baseline, or "pre-landfall" conditions. A subset of 48 sites was resampled during October 4 to 14, 2010, after oil had made landfall on the Gulf of Mexico coast, called the "post-landfall" sampling period, to determine if actionable concentrations of oil were present along shorelines. Few organic contaminants were detected in water; their detection frequencies generally were low and similar in pre-landfall and post-landfall samples. Only one organic contaminant--toluene--had significantly higher concentrations in post-landfall than pre-landfall water samples. No water samples exceeded any human-health benchmarks, and only one post-landfall water sample exceeded an aquatic-life benchmark--the toxic-unit benchmark for polycyclic aromatic hydrocarbons (PAH) mixtures. In sediment, concentrations of 3 parent PAHs and 17 alkylated PAH groups were significantly higher in post-landfall samples than pre-landfall samples. One pre-landfall sample from Texas exceeded the sediment toxic-unit benchmark for PAH mixtures; this site was not sampled during the post-landfall period. Empirical upper screening-value benchmarks for PAHs in sediment were exceeded at 37 percent of post-landfall samples and 22 percent of pre-landfall samples, but there was no significant difference in the proportion of samples exceeding benchmarks between paired pre-landfall and post-landfall samples. Seven sites had the largest concentration differences between post-landfall and pre-landfall samples for 15 alkylated PAHs. Five of these seven sites, located in Louisiana, Mississippi, and Alabama, had diagnostic geochemical evidence of Macondo-1 oil in post-landfall sediments and tarballs. For trace and major elements in water, analytical reporting levels for several elements were high and variable. No human-health benchmarks were exceeded, although these were available for only two elements. Aquatic-life benchmarks for trace elements were exceeded in 47 percent of water samples overall. The elements responsible for the most exceedances in post-landfall samples were boron, copper, and manganese. Benchmark exceedances in water could be substantially underestimated because some samples had reporting levels higher than the applicable benchmarks (such as cobalt, copper, lead and zinc) and some elements (such as boron and vanadium) were analyzed in samples from only one sampling period. For trace elements in whole sediment, empirical upper screening-value benchmarks were exceeded in 57 percent of post-landfall samples and 40 percent of pre-landfall samples, but there was no significant difference in the proportion of samples exceeding benchmarks between paired pre-landfall and post-landfall samples. Benchmark exceedance frequencies could be conservatively high because they are based on measurements of total trace-element concentrations in sediment. In the less than 63-micrometer sediment fraction, one or more trace or major elements were anthropogenically enriched relative to national baseline values for U.S. streams for all sediment samples except one. Sixteen percent of sediment samples exceeded upper screening-value benchmarks for, and were enriched in, one or more of the following elements: barium, vanadium, aluminum, manganese, arsenic, chromium, and cobalt. These samples were evenly divided between the sampling periods. Aquatic-life benchmarks were frequently exceeded along the Gulf of Mexico coast by trace elements in both water and sediment and by PAHs in sediment. For the most part, however, significant differences between pre-landfall and post-landfall samples were limited to concentrations of PAHs in sediment. At five sites along the coast, the higher post-landfall concentrations of PAHs were associated with diagnostic geochemical evidence of Deepwater Horizon Macondo-1 oil.

High-resolution characterization of individual flood deposits

NASA Astrophysics Data System (ADS)

Støren, Eivind; Paasche, Øyvind; Hirt, Ann

2014-05-01

In most fluvial landscapes rivers transport sediments within and across catchments throughout the year. During flood events the capacity and competence of the river manifolds, and consequently more sediment are eroded and transported within the catchment. Whenever such sediment-laden rivers reach lakes, sediments are deposited at rate much faster than background sedimentation. For this reason alone, lakes can provide exceptionally rich archives of paleofloods. Flood sediments carry information not only about frequency variability through time, but also about source area(s), the time of the deposit (on a seasonal scale), as well as the evolution of the flood. In order to scrutinize the information that can be extracted from such pristine lake records we have developed an approach where high-resolution data are compared to high-precision measurements of selected samples. More specifically, data from high-resolution X-ray fluorescence (XRF) scanning (Itrax) and magnetic susceptibility (Bartington MS2 point sensor) can potentially provide information on annual to decadal resolution. These fast and effective surface scanning methods are subjected to well-known uncertainties, which can impact the interpretation of individual layers. To overcome this challenge - and obtain the highest possible precision and resolution - precise quantitative analysis of discrete flood layers using magnetic hysteresis measurements and First-order reversal curves (FORCs) as well as conventional X-ray fluorescence spectrometer (Philips PW1404) have been conducted. FORCs are obtained with an Alternating Gradient Force Magnetometer and have exceptional high sensitivity (1 x 10-11 A m2) that allows samples smaller than 200 milligrams to be measured. This means that sediments representing a band of less than a couple of millimeters in the lake sediment cores can be sampled without notable contamination from adjacent non-flood sediments, and analyzed with a high degree of precision (analytical error ±2%). Analyses are carried out on a well-documented lake sediment flood-archive from Meringsdalsvatnet in Southern Norway, which is proven to contain the sedimentary imprint of over hundred floods during the last ca. 10 000 years, including well-known historical events. Preliminary results indicate only minor changes in magnetic mineralogy throughout the record, but notable changes are seen in saturation magnetization, which reflects variations in concentration of the ferromagnetic mineralogy. When these results are compared to corresponding concentration of iron (Fe) and rubidium (Rb) it becomes evident that the core contains two statistical populations, which may indicate two contrasting flood systems. There are at least three potential explanations for this pattern: (1) a dual source area; (2) different mechanisms that trigger floods (spring snowmelting versus intense summer rainstorms); (3) the magnitude of the floods, which influences the sedimentary composition; or 4) a combination of the above.

Structure of mangrove meiofaunal assemblages associated with local sediment conditions in subtropical eastern australia

NASA Astrophysics Data System (ADS)

Abdullah, Maizah M.; Lee, S. Y.

2017-11-01

Meiofauna are ubiquitous but poorly-studied components of soft-bottom marine habitats around the world, including mangroves. The dynamic environmental conditions and heterogeneous sediments of mangroves present challenges to understanding the structure of mangrove meiofaunal assemblages at various spatial and temporal scales. In this study, we investigated the meiofaunal assemblage structure of sediments colonised by three mangrove species, namely, Avicennia marina, Rhizophora stylosa and Aegiceras corniculatum, at three locations in subtropical eastern Australia. Spatial and temporal variations were tested by sampling at the three mangrove locations (i.e. Tallebudgera, Currumbin and Terranora) in autumn, with samplings repeated at Tallebudgera at two other times broadly representing during dry/cool winter and wet/hot summer seasons. We examined the variability of the sediment environments within each of the different mangrove species, and investigated how meiofaunal assemblages would respond to the particular changes in their habitats to result in differences in assemblage structure between and within sites. Total meiofaunal density was highest in Tallebudgera and Currumbin and lowest in Terranora (mean density of 424, 393 and 239 ind.10 cm-2, respectively). In Tallebudgera, the density was higher in winter and summer (mean density of 546 and 530 ind.10 cm-2, respectively). The meiofaunal assemblage in this study shows a trend and association with the environmental variables. High availability of food proxies such phaeopigments, Chl a or TOC, with moderate tannin content and appropriate habitat structure (sediment particle size, belowground root biomass and/or moisture content provide the best condition for the meiofauna to achieve the highest density. However, given the complex dynamic habitats and the spatial heterogeneity of the mangrove environments across different locations and seasons, no clear generalization could be made regarding the key environmental variables that predominantly shape the meiofaunal assemblages' structure.

Microbial Diversity of Hydrothermal Sediments in the Guaymas Basin: Evidence for Anaerobic Methanotrophic Communities†

PubMed Central

Teske, Andreas; Hinrichs, Kai-Uwe; Edgcomb, Virginia; de Vera Gomez, Alvin; Kysela, David; Sylva, Sean P.; Sogin, Mitchell L.; Jannasch, Holger W.

2002-01-01

Microbial communities in hydrothermally active sediments of the Guaymas Basin (Gulf of California, Mexico) were studied by using 16S rRNA sequencing and carbon isotopic analysis of archaeal and bacterial lipids. The Guaymas sediments harbored uncultured euryarchaeota of two distinct phylogenetic lineages within the anaerobic methane oxidation 1 (ANME-1) group, ANME-1a and ANME-1b, and of the ANME-2c lineage within the Methanosarcinales, both previously assigned to the methanotrophic archaea. The archaeal lipids in the Guaymas Basin sediments included archaeol, diagnostic for nonthermophilic euryarchaeota, and sn-2-hydroxyarchaeol, with the latter compound being particularly abundant in cultured members of the Methanosarcinales. The concentrations of these compounds were among the highest observed so far in studies of methane seep environments. The δ-13C values of these lipids (δ-13C = −89 to −58‰) indicate an origin from anaerobic methanotrophic archaea. This molecular-isotopic signature was found not only in samples that yielded predominantly ANME-2 clones but also in samples that yielded exclusively ANME-1 clones. ANME-1 archaea therefore remain strong candidates for mediation of the anaerobic oxidation of methane. Based on 16S rRNA data, the Guaymas sediments harbor phylogenetically diverse bacterial populations, which show considerable overlap with bacterial populations of geothermal habitats and natural or anthropogenic hydrocarbon-rich sites. Consistent with earlier observations, our combined evidence from bacterial phylogeny and molecular-isotopic data indicates an important role of some novel deeply branching bacteria in anaerobic methanotrophy. Anaerobic methane oxidation likely represents a significant and widely occurring process in the trophic ecology of methane-rich hydrothermal vents. This study stresses a high diversity among communities capable of anaerobic oxidation of methane. PMID:11916723

Reworked Middle Jurassic sandstones as a marker for Upper Cretaceous basin inversion in Central Europe—a case study for the U-Pb detrital zircon record of the Upper Cretaceous Schmilka section and their implication for the sedimentary cover of the Lausitz Block (Saxony, Germany)

NASA Astrophysics Data System (ADS)

Hofmann, Mandy; Voigt, Thomas; Bittner, Lucas; Gärtner, Andreas; Zieger, Johannes; Linnemann, Ulf

2018-04-01

The Saxonian-Bohemian Cretaceous Basin (Elbsandsteingebirge, E Germany and Czech Republic, Elbtal Group) comprises Upper Cretaceous sedimentary rocks from Upper Cenomanian to Santonian age. These sandstones were deposited in a narrow strait of the sea linking the northern Boreal shelf to the southern Tethyan areas. They were situated between the West Sudetic Island in the north and the Mid-European Island in the south. As known by former studies (e.g. Tröger, Geologie 6/7:717-730, 1964; Tröger, Geologie von Sachsen, Schweizerbart, 311-358, 2008; Voigt and Tröger, Proceedings of the 4th International Cretaceous Symposium, 275-290, 1996; Voigt, Dissertation, TU Bergakademie Freiberg, 1-130, 1995; Voigt, Zeitschrift der geologischen Wissenschaften 37(1-2): 15-39, 2009; Wilmsen et al., Freiberger Forschungshefte C540: 27-45, 2011) the main sedimentary input came from the north (Lausitz Block, southern West-Sudetic Island). A section of Turonian to Coniacian sandstones was sampled in the Elbsandsteingebirge near Schmilka (Elbtal Group, Saxony, Germany). The samples were analysed for their U-Pb age record of detrital zircon using LA-ICP-MS techniques. The results show main age clusters typical for the Bohemian Massif (local material) and are interpreted to reflect the erosion of uniform quartz-dominated sediments and basement rocks. Surprisingly, these rocks lack an expected Upper Proterozoic to Lower Palaeozoic age peak, which would be typical for the basement of the adjacent Lausitz Block (c. 540-c. 560 Ma). Therefore, the Lausitz Block basement must have been covered by younger sediments that acted as source rocks during deposition of the Elbtal Group. The sandstones of the Elbe valley (Elbtal Group, Schmilka section) represent the re-deposited sedimentary cover of the Lausitz Block in inverse order. This cover comprised Permian, Triassic, Jurassic and Lower Cretaceous deposits, which are eroded already today and cannot be investigated. Within the samples of the Elbtal Group (Schmilka section), the zircon age patterns change significantly towards the Lower Coniacian (topmost sample of the analysed section), where a major input of Meso- and Paleoproterozoic grains was obtained. Comparable ages are generally scarce in the working area. To have a reference for the detrital zircon age spectra of Triassic and Jurassic sediments of the area, two Upper Triassic und two Middle Jurassic clastic sediments of Germany were analysed. Surprisingly, the two Middle Jurassic (Dogger) sandstones from Bavaria and Lower Saxony showed similar detrital zircon age compositions as the Coniacian sediments on top of the Schmilka section (Elbe valley, Elbtal Group). In contrast, the two Upper Triassic sediments could be excluded as possible source rocks for the Upper Cretaceous sandstones of the Elbe valley (Schmilka section, Elbtal Group). The Meso- and Paleoproterozoic zircon age populations in the uppermost sandstone sample of the Schmilka section are assumed to originate from recycled Jurassic (Dogger) sandstones, resting on the Lausitz Block. These Middle Jurassic deposits were strongly influenced by a sedimentary input from the Scandinavian region (southern Baltica and North Sea Dome). The Turonian sandstones of the Schmilka section (samples below the topmost Coniacian sample) are interpreted to represent re-deposited Lower Cretaceous sediments resting on the Lausitz Block. A proposed synsedimentary uplift of about 5 km during the Upper Cretaceous along the Lausitz Fold (Lange et al., Zeitschrift der Deutschen Gesellschaft für Geowissenschaften 159(1):123-132, 2008) would have caused erosion of the pre-existing sedimentary cover of the Lausitz Block followed by inverse accumulation of the detritus into the Cretaceous Basin (Elbe valley, Elbtal Group). The Permian and Triassic cover units of the Lausitz Block were not exposed during the Upper Cretaceous, but are assumed to have contributed to younger (post-Coniacian) sediments of the Elbtal Group, which were eroded during uppermost Cretaceous and lower Paleogene. Based on this study, the detrital zircon record of the Jurassic Dogger sandstones of Germany can be seen as "marker ages" for the European Cretaceous Basin inversion. This paper presents the first results of a case study with further investigations in other areas of Europe to follow.

Water-quality, bed-sediment, and biological data (October 2010 through September 2011) and statistical summaries of data for streams in the Clark Fork basin, Montana

USGS Publications Warehouse

Dodge, Kent A.; Hornberger, Michelle I.; Dyke, Jessica

2013-01-01

Water, bed sediment, and biota were sampled in streams from Butte to near Missoula, Montana, as part of a monitoring program in the upper Clark Fork basin of western Montana; additional water samples were collected from near Galen to near Missoula at select sites as part of a supplemental sampling program. The sampling program was conducted by the U.S. Geological Survey in cooperation with the U.S. Environmental Protection Agency to characterize aquatic resources in the Clark Fork basin, with emphasis on trace elements associated with historic mining and smelting activities. Sampling sites were located on the Clark Fork and selected tributaries. Water samples were collected periodically at 20 sites from October 2010 through September 2011. Bed-sediment and biota samples were collected once at 14 sites during August 2011. This report presents the analytical results and quality-assurance data for water-quality, bed-sediment, and biota samples collected at sites from October 2010 through September 2011. Water-quality data include concentrations of selected major ions, trace elements, and suspended sediment. Turbidity was analyzed for water samples collected at the four sites where seasonal daily values of turbidity were being determined. Daily values of suspended-sediment concentration and suspended-sediment discharge were determined for four sites. Bed-sediment data include trace-element concentrations in the fine-grained fraction. Biological data include trace-element concentrations in whole-body tissue of aquatic benthic insects. Statistical summaries of water-quality, bed-sediment, and biological data for sites in the upper Clark Fork basin are provided for the period of record since 1985.

Water-quality, bed-sediment, and biological data (October 2015 through September 2016) and statistical summaries of data for streams in the Clark Fork Basin, Montana

USGS Publications Warehouse

Dodge, Kent A.; Hornberger, Michelle I.; Turner, Matthew A.

2018-03-30

Water, bed sediment, and biota were sampled in selected streams from Butte to near Missoula, Montana, as part of a monitoring program in the upper Clark Fork Basin of western Montana. The sampling program was led by the U.S. Geological Survey, in cooperation with the U.S. Environmental Protection Agency, to characterize aquatic resources in the Clark Fork Basin, with emphasis on trace elements associated with historic mining and smelting activities. Sampling sites were on the Clark Fork and selected tributaries. Water samples were collected periodically at 20 sites from October 2015 through September 2016. Bed-sediment and biota samples were collected once at 13 sites during August 2016.This report presents the analytical results and quality-assurance data for water-quality, bed-sediment, and biota samples collected at sites from October 2015 through September 2016. Water-quality data include concentrations of selected major ions, trace elements, and suspended sediment. Samples for analysis of turbidity were collected at 13 sites, whereas samples for analysis of dissolved organic carbon were collected at 10 sites. In addition, samples for analysis of nitrogen (nitrate plus nitrite) were collected at two sites. Daily values of mean suspended-sediment concentration and suspended-sediment discharge were determined for three sites. Seasonal daily values of turbidity were determined for five sites. Bed-sediment data include trace-element concentrations in the fine-grained (less than 0.063 millimeter) fraction. Biological data include trace-element concentrations in whole-body tissue of aquatic benthic insects. Statistical summaries of water-quality, bed-sediment, and biological data for sites in the upper Clark Fork Basin are provided for the period of record.

Occurrence of pesticides in groundwater and sediments and mineralogy of sediments and grain coatings underlying the Rutgers Agricultural Research and Extension Center, Upper Deerfield, New Jersey, 2007

USGS Publications Warehouse

Reilly, Timothy J.; Smalling, Kelly L.; Meyer, Michael T.; Sandstrom, Mark W.; Hladik, Michelle; Boehlke, Adam R.; Fishman, Neil S.; Battaglin, William A.; Kuivila, Kathryn

2014-01-01

Water and sediment samples were collected from June through October 2007 from seven plots at the Rutgers Agricultural Research and Extension Center in Upper Deerfield, New Jersey, and analyzed for a suite of pesticides (including fungicides) and other physical and chemical parameters (including sediment mineralogy) by the U.S. Geological Survey. Plots were selected for inclusion in this study on the basis of the crops grown and the pesticides used. Forty-one pesticides were detected in 14 water samples; these include 5 fungicides, 13 herbicides, 1 insecticide, and 22 pesticide degradates. The following pesticides and pesticide degradates were detected in 50 percent or more of the groundwater samples: 1-amide-4-hydroxy-chorothalonil, alachlor sulfonic acid, metolachlor oxanilic acid, metolachlor sulfonic acid, metalaxyl, and simazine. Dissolved-pesticide concentrations ranged from below their instrumental limit of detection to 36 micrograms per liter (for metolachlor sulfonic acid, a degradate of the herbicide metolachlor). The total number of pesticides found in groundwater samples ranged from 0 to 29. Fourteen pesticides were detected in sediment samples from continuous cores collected within each of the seven sampled plots; these include 4 fungicides, 2 herbicides, and 7 pesticide degradates. Pesticide concentrations in sediment samples ranged from below their instrumental limit of detection to 34.2 nanograms per gram (for azoxystrobin). The total number of pesticides found in sediment samples ranged from 0 to 8. Quantitative whole-rock and grain-coating mineralogy of sediment samples were determined by x-ray diffraction. Whole-rock analysis indicated that sediments were predominantly composed of quartz. The materials coating the quartz grains were removed to allow quantification of the trace mineral phases present.

Biogeochemical and Microbial Variation across 5500 km of Antarctic Surface Sediment Implicates Organic Matter as a Driver of Benthic Community Structure

PubMed Central

Learman, Deric R.; Henson, Michael W.; Thrash, J. Cameron; Temperton, Ben; Brannock, Pamela M.; Santos, Scott R.; Mahon, Andrew R.; Halanych, Kenneth M.

2016-01-01

Western Antarctica, one of the fastest warming locations on Earth, is a unique environment that is underexplored with regards to biodiversity. Although pelagic microbial communities in the Southern Ocean and coastal Antarctic waters have been well-studied, there are fewer investigations of benthic communities and most have a focused geographic range. We sampled surface sediment from 24 sites across a 5500 km region of Western Antarctica (covering the Ross Sea to the Weddell Sea) to examine relationships between microbial communities and sediment geochemistry. Sequencing of the 16S and 18S rRNA genes showed microbial communities in sediments from the Antarctic Peninsula (AP) and Western Antarctica (WA), including the Ross, Amundsen, and Bellingshausen Seas, could be distinguished by correlations with organic matter concentrations and stable isotope fractionation (total organic carbon; TOC, total nitrogen; TN, and δ13C). Overall, samples from the AP were higher in nutrient content (TOC, TN, and NH4+) and communities in these samples had higher relative abundances of operational taxonomic units (OTUs) classified as the diatom, Chaetoceros, a marine cercozoan, and four OTUs classified as Flammeovirgaceae or Flavobacteria. As these OTUs were strongly correlated with TOC, the data suggests the diatoms could be a source of organic matter and the Bacteroidetes and cercozoan are grazers that consume the organic matter. Additionally, samples from WA have lower nutrients and were dominated by Thaumarchaeota, which could be related to their known ability to thrive as lithotrophs. This study documents the largest analysis of benthic microbial communities to date in the Southern Ocean, representing almost half the continental shoreline of Antarctica, and documents trophic interactions and coupling of pelagic and benthic communities. Our results indicate potential modifications in carbon sequestration processes related to change in community composition, identifying a prospective mechanism that links climate change to carbon availability. PMID:27047451

Primary sources and toxicity of PAHs in Milwaukee-area streambed sediment

USGS Publications Warehouse

Baldwin, Austin K.; Corsi, Steven R.; Lutz, Michelle A.; Ingersoll, Christopher G.; Dorman, Rebecca A.; Magruder, Christopher; Magruder, Matthew

2017-01-01

High concentrations of polycyclic aromatic hydrocarbons (PAHs) in streams can be a significant stressor to aquatic organisms. To understand the likely sources and toxicity of PAHs in Milwaukee-area streams, streambed sediment samples from 40 sites and parking lot dust samples from 6 sites were analyzed for 38 parent PAHs and 25 alkylated PAHs. Diagnostic ratios, profile correlations, principal components analysis, source-receptor modeling, and mass fractions analysis were used to identify potential PAH sources to streambed sediment samples, and land-use analysis was used to relate streambed sediment PAH concentrations to different urban-related land uses. On the basis of this multiple lines-of-evidence approach, coal-tar pavement sealant was indicated as the primary source of PAHs in a majority of streambed sediment samples, contributing an estimated 77% of total PAHs to samples, on average. Comparison to the Probable Effect Concentrations and (or) the Equilibrium Partitioning Sediment Benchmark indicates that 78% of stream sediment samples are likely to cause adverse effects to benthic organisms. Laboratory toxicity tests on a 16-sample subset of the streambed sites using the amphipod Hyalella azteca (28-day) and the midge Chironomus dilutus (10-day) measured significant reductions in one or more biological endpoints, including survival, in 75% of samples, with H. azteca more responsive than C. dilutus.

Upper Clear Creek watershed aquatic chemistry and biota surveys, 2004-5, Whiskeytown National Recreation Area, Shasta County, California

USGS Publications Warehouse

Wulff, Marissa L.; May, Jason T.; Brown, Larry R.

2012-01-01

The U.S. Geological Survey, in cooperation with the National Park Service and Whiskeytown National Recreation Area, performed a comprehensive aquatic biota survey of the upper Clear Creek watershed, Shasta County, California, during 2004-5. Data collected in this study can provide resource managers with information regarding aquatic resources, watershed degradation, and regional biodiversity within Whiskeytown National Recreation Area. Surveys of water chemistry, bed-sediment chemistry, algae assemblages, benthic macroinvertebrate assemblages, aquatic vertebrate assemblages, in-stream habitat characteristics, and sediment heterogeneity were conducted at 17 stream sites during both 2004 and 2005, with an additional 4 sites surveyed in 2005. A total of 67 bed-sediment samples were analyzed for major and trace inorganic element concentrations. Forty-six water samples were analyzed for trace metals and nutrients. A total of 224 taxa of invertebrates were collected during these surveys. Eleven fish species, seven of which were native, and two species of larval amphibians, were collected. A total of 24 genera of soft algae and 159 taxa of diatoms were identified. To date, this survey represents the most comprehensive inventory of aquatic resources within Whiskeytown National Recreation Area, and this information can serve as a baseline for future monitoring efforts and to inform management decisions.

Population fluctuation and vertical distribution of meiofauna in the Red Sea interstitial environment.

PubMed

El-Serehy, Hamed A; Al-Misned, Fahad A; Al-Rasheid, Khaled A

2015-07-01

The composition and distribution of the benthic meiofauna assemblages of the Egyptian coasts along the Red Sea are described in relation to abiotic variables. Sediment samples were collected seasonally from three stations chosen along the Red Sea to observe the meiofaunal community structure, its temporal distribution and vertical fluctuation in relation to environmental conditions of the Red Sea marine ecosystem. The temperature, salinity, pH, dissolved oxygen, and redox potential were measured at the time of collection. The water content of the sediments, total organic matters and chlorophyll a values were determined, and sediment samples were subjected to granulometric analysis. A total of 10 meiofauna taxa were identified, with the meiofauna being primarily represented by nematodes (on annual average from 42% to 84%), harpacticoids, polycheates and ostracodes; and the meiofauna abundances ranging from 41 to 167 ind./10 cm(2). The meiofaunal population density fluctuated seasonally with a peak of 192.52 ind./10 cm(2) during summer at station II. The vertical zonation in the distribution of meiofaunal community was significantly correlated with interstitial water, chlorophyll a and total organic matter values. The present study indicates the existence of the well diversified meiofaunal group which can serve as food for higher trophic levels in the Red Sea interstitial environment.

Monitoring Sediment Size Distributions in a Regulated Gravel-Bed Coastal Stream

NASA Astrophysics Data System (ADS)

O'Connor, M. D.; Lewis, J.; Andrew, G.

2014-12-01

Lagunitas Creek drains 282 km2 in coastal Marin County, California. The watershed contains water supply reservoirs, urban areas, parks and habitat for threatened species (e.g. coho salmon). Water quality is impaired by excess fine sediment, and a plan to improve water quality (i.e. TMDL) was adopted by State authorities in 2014. The TMDL asserts changes in sediment delivery, transport, and storage contributed to the decline of coho. A sediment source analysis found a 2x increase in sediment supply. Concentrations of sand and fine gravel in the channel are elevated and, during high flows, more mobile. The Federal Coho Salmon Recovery Plan (2012) describes sediment conditions affecting coho habitat as "fair". Reservoir managers were directed by the State in 1995 to reduce sedimentation and improve riparian vegetation and woody debris to improve fish habitat. Prior sediment monitoring found variability related primarily to intense winter runoff without identifying clear trends. A new sediment monitoring program was implemented in 2012 for ongoing quantification of sediment conditions. The goal of monitoring is to determine with specified statistical certainty changes in sediment conditions over time and variation among reaches throughout the watershed. Conditions were compared in 3 reaches of Lagunitas Cr. and 2 tributaries. In each of the 5 channel reaches, 4 shorter reaches were sampled in a systematic grid comprised of 30 cross-channel transects spaced at intervals of 1/2 bankfull width and 10 sample points per transect; n=1200 in 5 channel reaches. Sediment diameter class (one clast), sediment facies (a patch descriptor), and habitat type were observed at each point. Fine sediment depth was measured by probing the thickness of the deposit, providing a means to estimate total volume of fine sediment and a measure of rearing habitat occupied by fine sediment (e.g. V*). Sub-surface sediment samples were collected and analyzed for size distribution at two scales: a larger sample of a spawning site in each sample reach and 20 smaller sub-samples of fine sediment facies. These data provide a robust description of streambed sediment conditions (e.g. % < 1 mm) expected to vary systematically across the watershed (e.g. fining downstream) and over time in response to management of watershed resources.

Summary and interpretation of discrete and continuous water-quality monitoring data, Mattawoman Creek, Charles County, Maryland, 2000-11

USGS Publications Warehouse

Chanat, Jeffrey G.; Miller, Cherie V.; Bell, Joseph M.; Majedi, Brenda Feit; Brower, David P.

2013-01-01

Discrete samples and continuous (15-minute interval) water-quality data were collected at Mattawoman Creek (U.S. Geological Survey station number 01658000) from October 2000 through January 2011, in cooperation with the Charles County (Maryland) Department of Planning and Growth Management, the Maryland Department of the Environment, and the Maryland Geological Survey. Mattawoman Creek is a fourth-order Maryland tributary to the tidal freshwater Potomac River; the creek’s watershed is experiencing development pressure due to its proximity to Washington, D.C. Data were analyzed for the purpose of describing ambient water quality, identifying potential contaminant sources, and quantifying nutrient and sediment loads to the tidal freshwater Mattawoman estuary. Continuous data, collected at 15-minute intervals, included discharge, derived from stage measurements made using a pressure transducer, as well as water temperature, pH, specific conductance, dissolved oxygen, and turbidity, all measured using a water-quality sonde. In addition to the continuous data, a total of 360 discrete water-quality samples, representative of monthly low-flow and targeted storm conditions, were analyzed for suspended sediment and nutrients. Continuous observations gathered by a second water-quality sonde, which was temporarily deployed in 2011 for quality-control purposes, indicated substantial lateral water-quality gradients due to inflow from a nearby tributary, representing about 10 percent of the total gaged area upstream of the sampling location. These lateral gradients introduced a time-varying bias into both the continuous and discrete data, resulting in observations that were at some times representative of water-quality conditions in the main channel and at other times biased towards conditions in the tributary. Despite this limitation, both the continuous and discrete data provided insight into the watershed-scale factors that influence water quality in Mattawoman Creek. Annual precipitation over the study period was representative of the long-term record for southern Maryland. The median value of continuously measured discharge was 25 cubic feet per second (ft3/s), and the maximum observed value was 3,210 ft3/s; there were 498 days, or about 15 percent of the study period, when flow was zero or too low to measure. Continuously measured water temperature followed a seasonal trend characteristic of the geographic setting; the trend in dissolved oxygen was inverted relative to temperature, and reflected nearly saturated conditions year round. Relations between discharge and both pH and specific conductance indicate that stream water can be conceptualized as a mixture of acidic, dilute precipitation with pH-neutral groundwater of higher conductance. Specific conductance data showed a pronounced winter peak in both median and extreme measurements, indicating the influence of road salt. However, this influence is minor relative to that observed in the Northeast Branch Anacostia River (U.S. Geological Survey station number 01649500), a nearby, more heavily urbanized comparison basin. The median suspended-sediment concentration in discrete samples was 24 milligrams per liter (mg/L), with minimum and maximum concentrations of 1 mg/L and 2,890 mg/L, respectively. Total nitrogen ranged from 0.21 mg/L to 4.09 mg/L, with a median of 0.69 mg/L; total phosphorus ranged from less than 0.01 mg/L to 0.98 mg/L, with a median of 0.07 mg/L. Total nitrogen was dominated by the dissolved organic fraction (49 percent based on median species concentrations); total phosphorus was predominantly particulate (70 percent). Seasonal trends in suspended-sediment concentration indicate a supply subsidy in late winter and spring; this could be linked to flood-plain interaction, mobilization of sediment from the channel or banks, or anthropogenic input. Seasonal trends for both total phosphorus and total nitrogen generally corresponded to seasonal trends for suspended sediment, indicating a common underlying physical control, likely acting in synchrony with seasonal biological controls on total nutrient concentrations. Speciation of phosphorus, including proportional concentration of the biologically available dissolved inorganic fraction, did not vary seasonally. The speciation of nitrogen reflected demand for inorganic nitrogen and associated transformation into organic nitrogen during the growing season. Stepwise regression models were developed, using continuous data corresponding to collection times for discrete samples as candidate surrogates for suspended sediment, total phosphorus, and total nitrogen. Turbidity and discharge were both included in the model for suspended sediment (R2 = 0.76, n = 185); only turbidity was selected as a robust predictor of total phosphorus and nitrogen (R2 = 0.68 and 0.61, respectively, n = 186 for both). Loads of sediment and nutrients to the downstream Mattawoman estuary were computed using the U.S. Geological Survey computer program LOADEST. Load estimation included comparison of a routinely applied seven-parameter regression model based on time, season, and discharge, with an eight-parameter model that also includes turbidity. Adding turbidity decreased total load estimates, based on hourly data for a fixed 2-month period, by 21, 8, and 3 percent for suspended sediment, total phosphorus, and total nitrogen, respectively, in addition to decreasing the standard error of prediction for all three constituents. The seasonal pattern in specific conductance, reflecting road salt application, is the strongest evidence of the effect of upstream development on water quality at Mattawoman Creek. Accordingly, ongoing continuous monitoring for trends in specific conductance would be the most reliable means of detecting further degradation associated with increased development.

Compositional Data for Bengal Delta Sediment Collected from a Borehole at Rajoir, Bangladesh

USGS Publications Warehouse

Breit, George N.; Yount, James C.; Uddin, Md. Nehal; Muneem, Ad. Atual; Lowers, Heather; Berry, Cyrus J.; Whitney, John W.

2007-01-01

Processes active within sediment of the Bengal basin have attracted world concern because of the locally high content of arsenic dissolved in ground water drawn from that sediment. Sediment samples were collected from a borehole in the town of Rajoir, Rajoir upazila, Madaripur district, Bangladesh, to investigate the processes contributing to arsenic contamination. The samples were mineralogically and chemically analyzed to determine compositional variations related to the arsenic content of the sediment. Mineralogy of the sediment was determined using powder X-ray diffraction. Bulk chemical composition was measured by Combustion; Inductively Coupled Plasma Atomic Emission Spectroscopy; Energy Dispersive X-ray Fluorescence; and Hydride Generation Atomic Absorption Spectrophotometry. Sediment was treated with 0.5 N HCl and resulting solutions were analyzed, primarily to evaluate the abundance and oxidation state of acid-soluble iron. Acid-volatile sulfide, acid-soluble sulfate, and reducible sulfide were also measured on a few samples. Sediment sampled at Rajoir is typically unlithified, gray, micaceous, feldspathic arenaceous sand with a few silt and clay layers. Arsenic content of the sediment ranges from 0.6 to 21 ppm with a median of 1.2 ppm.

Nitrogen-assisted Three-phase Equilibrium in Hydrate Systems Composed of Water, Methane, Carbon Dioxide, and Nitrogen

NASA Astrophysics Data System (ADS)

Darnell, K.; Flemings, P. B.; DiCarlo, D. A.

2016-12-01

In June 2016, seawater samples at sediment-seawater interface and sediment samples were collected by the he Jiaolong, China's manned submersible, at four sampling sites located in the Yap Trench. Seawater samples from different depths of the trench were also collected by CTD. Chemical parameters, including pH, alkanility, concentrations of dissolved inorganic carbon, dissolved and total organic carbon, methane, dimethylsulfoniopropionate, nutrients, carbohydrates, and amino acids were analyzed in the seawater samples. Concentrations of total organic carbon, six constant elements and nine trace elements were determined in the sediment samples. All the vertical profiles of the chemical parameters in the seawater have unique characteristics. Our resluts also showed that the carbonate compensation depth (CCD) was between 4500 m and 5000 m in the trench. The hadal sediment at 6500 m depth under the CCD line was siliceous ooze favored for the burial of orgaic carbon, attributed to accumulation of surface sediment by gravity flow. The abyssal sediment at the 4500 m depth was calcareous ooze. Various microfossils, such as discoasters and diatoms, were identified in different sediment layers of the sediment samples.Based on the ratios of Fe/Al and Ti/Al, and the correlation between different elements, the sediment in the Yap Trench were derived from biogenic, terrestrial, volcanic and autogenic sources. The ratios of Ni/Co and V/Cr showed that the deposition environment of the trench should be oxidative, arributed to inflow of the Antractic bottom oxygen-rich seawater.The high concentraiont of Ca in the sediment from the station 371-Yap-S02 below 4 cm depth indicated that there was no large-scale volcanic eruption in the research area and the volcanic materials in the sediment might orginated from the Mariana Volcanic Arc, and the Carolyn Ridge has been slowly sinking on the east side of the trench due to plate subduction. This study is the first systematic study of chemical characteristics in the seawater and sediment of the Yap Trench.

The evaluation of hydrochemical parameters and lithological characteristics of sediments in some lakes from Danube Delta - Romania Study case: Matita, Babina, Rosu, Uzlina and Isacova Lakes - 2010.

NASA Astrophysics Data System (ADS)

Catianis, I.; Grosu, D.; Radan, S.

2012-04-01

This study attempts to estimate the quality of water and sediments from five lakes of Danube Delta - Romania. Due to the great variety of plant and animal species, delta lakes are considered sensitive ecosystems which may become quite susceptible to anthropogenic influences. The water and sediment samples were gathered from a considerable number of sampling stations during the two campaigns performed in the summer and autumn of 2010. Different techniques were applied to assay variations in surface waters and lacustrine sediment quality. Water samples measured parameters were: dissolved oxygen, temperature, electrical conductivity, total dissolved solids, pH, redox potential, nitrates, nitrites, phosphates, sulphates etc. The main lithological parameters studied were: total organic matter, carbonates and siliciclastic material. The preliminary results indicate that these investigated lakes are quite influenced by external factors as: morphological features, climatic parameters (pressure, humidity, temperature, wind-speed, rainfall etc) and their position within the deltaic hydrological network. Performed analyses showed that the correlations between different parameters differ with respect to sampling station positions. The physico-chemical characteristics of the lakes and connection canals show small variation ranges. In some sampling stations, lower concentration of oxygen and medium pH change from slightly alkaline to alkaline were incidentally observed. The registered data also confirmed the influences of seasonal characteristics. Chemical analyses do not show high values for nitrates, nitrites and sulphates. As regards to phosphate concentration we found out some higher values. In this respect, we have to perform other detailed chemical analyses in order to establish their origin in water. Overall the physico-chemical investigations reveal normal values, which are in agreement with environmental quality standards for surface waters. Sediment cores present uniform profiles, being homogenous in color, varying from light grey brown to dark grey brown, showing sometimes gradual colored particular layers. The water content indicate a general decrease with depth, all cores having a high content of water in the top (fluffy sediments) which decrease downcore, where the sediments become more compact. The bottom sediment samples are quite similar in terms of sedimentology (textural and structural), belonging to the category which range from silty to silty clayey (fine and very fine) and sometimes sandy deposits. Every examined core presents an individual high percentage of organic matter at the top, a subsidiary low content of carbonates and the rest being represented by siliciclastic material. The preliminary assessments performed in 2010 indicate that all five investigated lakes presents a normal environmental status for such water systems with no evident pollution trace. Further detailed chemical analyses are needed to argue the origin and mineralogical composition of organic matter and carbonates which were found out in these reservoirs. Acknowledgments: "This work was supported by the strategic grant POSDRU/89/1.5/S/58852, Project "Postdoctoral program for training scientific researchers" co-financed by the European Social Found within the Sectorial Operational Program Human Resources Development 2007 - 2013", and also was performed with scientific and technical assistance, logistical support and field site access provided by NIRD GeoEcoMar - Romania.

Concentrations, fluxes, and yields of nitrogen, phosphorus, and suspended sediment in the Illinois River basin, 1996-2000

USGS Publications Warehouse

Terrio, Paul J.

2006-01-01

Concentrations, spatial and temporal variations, and fluxes of nitrogen, phosphorus, and suspended sediment were determined for 16 streams in the Illinois River Basin, Illinois from October 1996 through September 2000. Water samples were collected through the National Water-Quality Assessment's Lower Illinois River Basin (LIRB) and Upper Illinois River Basin (UIRB) Study Units on a monthly to weekly frequency from watersheds representing predominantly agricultural and urban land, as well as areas of mixed land-use. Streams in agricultural watersheds had high concentrations and fluxes of nitrate nitrogen, whereas streams in predominantly urban watersheds had high concentrations (above background levels) of ammonia nitrogen, organic nitrogen, and phosphorus. Median concentrations of nitrate nitrogen and total phosphorus were similar at the two Illinois River sampling stations (Illinois River at Ottawa, Ill. and Illinois River at Valley City, Ill.) that represented the downstream points of the UIRB and LIRB Study Units, respectively, and integrated multiple land-use areas. Concentrations of nitrogen were typically highest in the spring and lowest in the fall in agricultural watersheds, but highest in the winter in urban watersheds. Phosphorus concentrations in urban watersheds were highest in the fall and winter, but there was minimal seasonal variation in phosphorus concentrations in agricultural watersheds. Concentrations of nitrate and total nitrogen were affected primarily by non-point sources and hydrologic factors such as streamflow, storm intensity, watershed configuration, and soil permeability, whereas concentrations of phosphorus were affected largely by point-source contributions that typically have little seasonal variation. Seasonal variation in hydrologic conditions was an important factor for seasonal variation in nutrient concentration. Fluxes and yields of nitrogen and phosphorus forms varied substantially throughout the Illinois River Basin, and yields of specific nutrient forms were determined primarily by upstream land uses. Yields of nitrate nitrogen were highest in predominantly agricultural watersheds, whereas yields of phosphorus and ammonia nitrogen were highest in urban watersheds with wastewater effluent contributions. Yields of both total nitrogen and total phosphorus were similar at the two Illinois River stations representing the integrated UIRB and LIRB Study Units. Concentrations of suspended sediment ranged from 1 to 3,110 milligrams per liter (mg/L), with median concentrations generally higher in the UIRB. Suspended-sediment concentrations were highest and most variable in the LaMoine River Basin. The median concentration of suspended sediment in the Illinois River at Valley City, Ill. (155 mg/L) was twice as high as that at Ottawa, Ill. (80 mg/L). Fluxes of suspended sediment generally corresponded to watershed size and yields from agricultural watersheds were larger than yields from urban watersheds. The flux in the Illinois River at Valley City, Ill. (4,880,000 tons per year) was approximately four times the flux in the Illinois River at Ottawa, Ill. (1,060,000 tons per year).

Presence of selected chemicals of emerging concern in water and bottom sediment from the St. Louis River, St. Louis Bay, and Superior Bay, Minnesota and Wisconsin, 2010

USGS Publications Warehouse

Christensen, Victoria G.; Lee, Kathy E.; Kieta, Kristen A.; Elliott, Sarah M.

2012-01-01

The St. Louis Bay of Lake Superior receives substantial urban runoff, wastewater treatment plant effluent, and industrial effluent. In 1987, the International Joint Commission designated the St. Louis Bay portion of the lower St. Louis River as one of the Great Lakes Areas of Concern. Concerns exist about the potential effects of chemicals of emerging concern on aquatic biota because many of these chemicals, including endocrine active chemicals, have been shown to affect the endocrine systems of fish. To determine the occurrence of chemicals of emerging concern in the St. Louis River, the St. Louis Bay, and Superior Bay, the U.S. Geological Survey in cooperation with the Minnesota Pollution Control Agency and the Wisconsin Department of Natural Resources collected water and bottom-sediment samples from 40 sites from August through October 2010. The objectives of this study were to (1) identify the extent to which chemicals of emerging concern, including pharmaceuticals, hormones, and other organic chemicals, occur in the St. Louis River, St. Louis Bay, and Superior Bay, and (2) identify the extent to which the chemicals may have accumulated in bottom sediment of the study area. Samples were analyzed for selected wastewater indicators, hormones, sterols, bisphenol A, and human-health pharmaceuticals. During this study, 33 of 89 chemicals of emerging concern were detected among all water samples collected and 56 of 104 chemicals of emerging concern were detected in bottom-sediment samples. The chemical N,N-diethyl-meta-toluamide (DEET) was the most commonly detected chemical in water samples and 2,6-dimethylnaphthalene was the most commonly detected chemical in bottom-sediment samples. In general, chemicals of emerging concern were detected at a higher frequency in bottom-sediment samples than in water samples. Estrone (a steroid hormone) and hexahydrohexamethyl cyclopentabensopyran (a synthetic fragrance) were the most commonly detected endocrine active chemicals in water samples; beta-sitosterol (a plant sterol), estrone, and 4-tert-octylphenol (an alkylphenol) were the most commonly detected endocrine active chemicals in bottom-sediment samples. The greater detection frequency of chemicals in bottom-sediment samples compared to the detection frequency in water samples indicates that bottom sediment is an important sink for chemicals of emerging concern. At least one polycyclic aromatic hydrocarbon was detected in every sample; and in most samples, all nine polycyclic aromatic hydrocarbons included in analyses were detected. Bottom sediment collected from Superior Bay had the most polycyclic aromatic hydrocarbon detections of the sediment sampling locations.

Piecewise SALT sampling for estimating suspended sediment yields

Treesearch

Robert B. Thomas

1989-01-01

A probability sampling method called SALT (Selection At List Time) has been developed for collecting and summarizing data on delivery of suspended sediment in rivers. It is based on sampling and estimating yield using a suspended-sediment rating curve for high discharges and simple random sampling for low flows. The method gives unbiased estimates of total yield and...

Glacimarine sedimentation in Petermann Fjord and Nares Strait, NW Greenland

NASA Astrophysics Data System (ADS)

Hogan, Kelly; Jakobsson, Martin; Mayer, Larry; Mix, Alan; Nielsen, Tove; Kamla, Elina; Reilly, Brendan; Heirman, Katrina An; Stranne, Christian; Mohammed, Rezwan; Eriksson, Bjorn; Jerram, Kevin

2017-04-01

Here we build on preliminary results from 6500 line-km of high-resolution chirp sub-bottom profiles (2-7 kHz) acquired in Petermann Fjord and Nares Strait during the Petermann 2015 Expedition of the Swedish icebreaker Oden. We map the unlithified sediment cover in Peterman Fjord, which consists of up to 3 conformable "drape" units and calculate volumes of this assumed "post-glacial" fill. In Nares Strait we have mapped sediment volumes in local basins just beyond the sill at the Petermann Fjord-mouth: do these sediments represent material flushed out from the grounding zone of Petermann Glacier when it was grounded at the sill? In this vein, and interestingly, some of the thickest sediments that we observe are found close to a grounding-zone wedge (GZW) in Nares Strait that represents a former grounding zone of ice retreating southwards through the strait. We also map conformable units across Nares Strait and consider the similarities between these and the sediment units in the fjord. Do the strong reflections between the units represent the same climatic, oceanographic or process-shift both inside and outside the fjord? We also aim to tie our new acoustic stratigraphy to sediment-core data (lithofacies, dates) and, therefore, to comment on the age of the mapped sediment units and present ideas on the glacimarine flux of material to the Petermann-Nares system. Primary sediment delivery to the seafloor in this environment is thought to be predominantly through sedimentation from meltwater plumes but also of iceberg-rafted debris (IRD). However, sediment redeposition by slope failures on a variety of scales also occurs and has focussed sediments into discrete basins where the seafloor is rugged. This work - which aims to relate past sediment, meltwater and iceberg fluxes to changes in climate - will help us to identify how the system has responded to a past global warming event, namely the last deglaciation. This is particularly relevant in light of the recent thinning and acceleration of NW Greenland's marine-terminating outlet glaciers.

Late Holocene climate dynamics: A high-resolution sediment core from Maxwell Bay, South Shetland Islands, Antarctica

NASA Astrophysics Data System (ADS)

Hass, H. C.; Kuhn, G.; Monien, P.; Brumsack, H.

2009-12-01

Presently, the Antarctic Peninsula belongs to the fastest warming regions on Earth. Meltwater discharge increases, glaciers retreat and as a consequence the coastal ecosystems change at an ever-increasing pace. The goal of our study is to reconstruct the timing and impact of historical climate phases such as the Medieval Warm Period (MWP) and the Little Ice Age (LIA) as analogs for the recent climate development, and to identify the marine sedimentary processes affected by the changing climate. We present results from a 928 cm long gravity core from Maxwell Bay, King George Island, Antarctica. The core spans the past c. 1700 years. Sedimentation at the core site is governed by sediments from the tributary fjords entering Maxwell Bay, namely Potter and Marian coves and Collins Harbor. There are two sediment classes: Class 1 is characterized by two grain-size subpopulations. The coarser one represents the bedload fraction, whereas the finer one is interpreted to represent meltwater-induced suspension load. Since meltwater is restricted to the summer season, it is suggested that Class 1 sediments characterize periods of intense summer-meltwater production and thus, warmer climate phases. Class 2 samples show the same coarse grain-size mode but they lack the fine subpopulation. We suggest that these sediments indicate less intense summer-meltwater production and thus colder climatic conditions. The mean grain size suggests that average bottom current speeds were slightly higher during colder climate phases than during the warmer phases. Bioproduction at the core location and in the sediment source areas as reflected by bio-productivity proxies (TOC, bio-opal) is not always positively related to climate since warm-phase meltwater discharge adversely affects bioproduction through light attenuation by turbid waters. Furthermore, during warmer phases the TOC signal becomes diluted due to increased deposition of terrigenous fine sediment. Comparison with Antarctic, hemispherical, and global temperature reconstructions reveals clear signals of the MWP, the LIA and the post-LIA climate recovery. Class 1 sediments dominate the warmer MWP, Class 2 sediments dominate the colder LIA. The Maxwell Bay record shows climate signals that are partly unique to either one of the hemispheres. Thus, it resembles best the global temperature reconstruction. Apparently, the MWP started earlier in the Southern Hemisphere (SH) than in the Northern Hemisphere suggesting that the source for the warming might also be in the SH. In contrast to the MWP the timing of the LIA appears to be largely synchronous between the hemispheres. Generally finer sediments clearly mark the end of the LIA. however no stronger meltwater influence can be detected; the conditions of the AD 1970s resemble those at the beginning of the MWP. Changing sedimentation processes cannot be detected in the Maxwell Bay record until AD 1975.

Measurements of actinides in soil, sediments, water and vegetation in Northern New Mexico

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gallaher, B. M.; Efurd, D. W.

2002-01-01

This study was undertaken during 1991 - 1998 to identify the origin of plutonium uranium in northern New Mexico Rio Grande and tributary stream sediments. Isotopic fingerprinting techniques help distinguish radioactivity from Los Alamos National Laboratory (LANL) and from global fallout or natural sources. The geographic area covered by the study extended from the headwaters of the Rio Grande in southern Colorado to Elephant Butte Reservoir in southern New Mexico. Over 100 samples of stream channel and reservoir bottom sediments were analyzed for the atom ratios of plutonium and uranium isotopes using thermal ionization mass spectrometry (TIMS). Comparison of thesemore » ratios against those for fallout or natural sources allowed for quantification of the Laboratory impact. Of the seven major drainages crossing LANL, movement of LANL plutonium into the Rio Grande can only be traced via Los Alamos Canyon. The majority of sampled locations within and adjacent to LANL have little or no input of plutonium from the Laboratory. Samples collected upstream and distant to L A N show an average (+ s.d.) fallout 240Pu/239Pauto m ratio of 0.169 + 0.012, consistent with published worldwide global fallout values. These regional background ratios differ significantly from the 240Pu/239Pu atom ratio of 0.015 that is representative of LANL-derived plutonium entering the Rio Grande at Los Alamos Canyon. Mixing calculations of these sources indicate that the largest proportion (60% to 90%) of the plutonium in the Rio Grande sediments is from global atmospheric fallout, with an average of about 25% from the Laboratory. The LANL plutonium is identifiable intermittently along the 35-km reach of the Rio Grande to Cochiti Reservoir. The source of the LANL-derived plutonium in the Rio Grande was traced primarily to pre-1960 discharges of liquid effluents into a canyon bottom at a distance approximately 20 km upstream of the river. Plutonium levels decline exponentially with distance downstream after mixing with cleaner sediments, yet the LANL isotopic fingerprint remains distinct for at least 55 km from the effluent source. Plutonium isotopes in Rio Grande and Pajarito Plateau sediments are not at levels known to adversely affect public health. Activities of 239+240pwui thin this sample set ranged from 0.001- 0.046 pCUg in the Rio Grande to 3.7 pCi/g near the effluent discharge point. Levels in the Rio Grande are usually more than 1000 times. lower than prescribed cleanup standards. Uranium in stream and reservoir sediments is predominantly within natural concentration ranges and is of natural uranium isotopic composition. None of the sediments from the Rio Grande show identifiable Laboratory uranium, using the isotopic ratios. These results suggest that the mass of Laboratory-derived uranium entering the Rio Grande is small relative to the natural load carried with river sediments.« less

Identification of a new degradation product of the antifouling agent Irgarol 1051 in natural samples

USGS Publications Warehouse

Ferrer, I.; Barcelo, D.

2001-01-01

A main degradation product of Irgarol [2-(methylthio)-4-(tert-butylamino)-6-(cyclopropylamino)-s-triazine], one of the most widely used compounds in antifouling paints, was detected at trace levels in seawater and sediment samples collected from several marinas on the Mediterranean coast. This degradation product was identified as 2-methylthio-4-tert-butylamino-s-triazine. The unequivocal identification of this compound in seawater samples was carried out by solid-phase extraction (SPE) coupled on-line with liquid chromatography-atmospheric pressure chemical ionization-mass spectrometry (LC-APCI-MS). SPE was carried out by passing 150 ml of seawater sample through a cartridge containing a polymeric phase (PLRP-s), with recoveries ranging from 92 to 108% (n=5). Using LC-MS detection in positive ion mode, useful structural information was obtained by increasing the fragmentor voltage, thus permitting the unequivocal identification of this compound in natural samples. Method detection limits were in the range of 0.002 to 0.005 ??g/l. Overall, the combination of on-line SPE and LC-APCI-MS represents an important advance in environmental analysis of herbicide degradation products in seawater, since it demonstrates that trace amounts of new polar metabolites may be determined rapidly. This paper reports the LC-MS identification of the main degradation product of Irgarol in seawater and sediment samples. ?? 2001 Elsevier Science B.V. All rights reserved.

Pteropods are Undervalued Contributors to Aragonite Flux in Tropical Gyres

NASA Astrophysics Data System (ADS)

Pebody, C. A.; Lampitt, R. S.

2016-02-01

Pteropods are a large component of the animals routinely caught in sediment traps at 3000m at the NOG observatory in the North Atlantic Oligotrophic Gyre and at the SOG observatory in the South Atlantic Oligotrophic Gyre. Sediment traps have been used to collect downward settling material at NOG and SOG since 2008. Pteropods have been identified and removed from the samples during processing in line with best practice. Some of these animals maybe opportunistic swimmers, but some are most definitely broken and should be considered as a component of the downward particle flux. Samples from both locations demonstrate a sustained and sometimes seasonal flux of pteropods to the deep ocean interior. In gyre regions with low levels of particle flux compared to temperate regions, the additional mostly inorganic material supplied in the form of pteropod shells represents a large proportional increase. Our data set from both northern and southern Atlantic gyres demonstrates due consideration should be given to the importance of pteropod flux and the contribution this makes to the biological carbon pump. These observatories at 23°N 41°W and 18°S 25°W, are part of the FixO3 open observatory network and are supported by NOC and NERC. Analysis of the first three years of each observatory are now yielding new insight on these large and poorly sampled areas of the open ocean. Key words: pteropods; aragonite; sediment traps; NOG SOG; FixO3; biological carbon pump; biogeochemical cycles; Tropical Atlantic Gyres.

Assessment of selected contaminants in streambed- and suspended-sediment samples collected in Bexar County, Texas, 2007-09

USGS Publications Warehouse

Wilson, Jennifer T.

2011-01-01

Elevated concentrations of sediment-associated contaminants are typically associated with urban areas such as San Antonio, Texas, in Bexar County, the seventh most populous city in the United States. This report describes an assessment of selected sediment-associated contaminants in samples collected in Bexar County from sites on the following streams: Medio Creek, Medina River, Elm Creek, Martinez Creek, Chupaderas Creek, Leon Creek, Salado Creek, and San Antonio River. During 2007-09, the U.S. Geological Survey periodically collected surficial streambed-sediment samples during base flow and suspended-sediment (large-volume suspended-sediment) samples from selected streams during stormwater runoff. All sediment samples were analyzed for major and trace elements and for organic compounds including halogenated organic compounds and polycyclic aromatic hydrocarbons (PAHs). Selected contaminants in streambed and suspended sediments in watersheds of the eight major streams in Bexar County were assessed by using a variety of methods—observations of occurrence and distribution, comparison to sediment-quality guidelines and data from previous studies, statistical analyses, and source indicators. Trace elements concentrations were low compared to the consensus-based sediment-quality guidelines threshold effect concentration (TEC) and probable effect concentration (PEC). Trace element concentrations were greater than the TEC in 28 percent of the samples and greater than the PEC in 1.5 percent of the samples. Chromium concentrations exceeded sediment-quality guidelines more frequently than concentrations of any other constituents analyzed in this study (greater than the TEC in 69 percent of samples and greater than the PEC in 8 percent of samples). Mean trace element concentrations generally are lower in Bexar County samples compared to concentrations in samples collected during previous studies in the Austin and Fort Worth, Texas, areas, but considering the relatively large ranges and standard deviations associated with the concentrations measured in all three areas, the trace element concentrations are similar. On the basis of Mann-Whitney U test results, the presence of a military installation in a watershed was associated with statistically significant higher chromium, mercury, and zinc concentrations in streambed sediments compared to concentrations of the same elements in a watershed without a military installation. Halogenated organic compounds analyzed in sediment samples included pesticides (chlordane, dieldrin, DDT, DDD, and DDE), polychlorinated biphenyls (PCBs), and brominated flame retardants. Three or more halogenated organic compounds were detected in each sediment sample, and 66 percent of all concentrations were less than the respective interim reporting levels. Halogenated organic compound concentrations were mostly low compared to consensus-based sediment quality guidelines-;TECs were exceeded in 11 percent of the analyses and PECs were exceeded in 1 percent of the analyses. Chlordane compounds were the most frequently detected halogenated organic compounds with one or more detections of chlordane compounds in every watershed; concentrations were greater than the TEC in 6 percent of the samples. Dieldrin was detected in 50 percent of all samples, however all concentrations were much less than the TEC. The DDT compounds (p,p'-DDT, p,p'-DDD, and p,p'-DDE) were detected less frequently than some other halogenated organic compounds, however most detections exceeded the TECs. p,p'-DDT was detected in 13 percent of the samples (TEC exceeded in 67 percent); p,p'-DDD was detected in 19 percent of the samples (TEC exceeded in 78 percent); and p,p'-DDE was detected in 35 percent of the samples (TEC exceeded in 53 percent). p,p'-DDE concentrations in streambed-sediment samples correlate positively with population density and residential, commercial, and transportation land use. One or more PCB congeners were detected in

Factors influencing the biogeochemistry of sedimentary carbon and phosphorus in the Sacramento-San Joaquin Delta

USGS Publications Warehouse

Nilsen, E.B.; Delaney, M.L.

2005-01-01

This study characterizes organic carbon (Corganic) and phosphorus (P) geochemistry in surface sediments of the Sacramento-San Joaquin Delta, California. Sediment cores were collected from five sites on a sample transect from the edge of the San Francisco Bay eastward to the freshwater Consumnes River. The top 8 cm of each core were analyzed (in 1-cm intervals) for Corganic, four P fractions, and redox-sensitive trace metals (uranium and manganese). Sedimentary Corganic concentrations and Corganic:P ratios decreased, while reactive P concentrations increased moving inland in the Delta. The fraction of total P represented by organic P increased inland, while that of authigenic P was higher bayward than inland reflecting increased diagenetic alteration of organic matter toward the bayward end of the transect. The redox indicator metals are consistent with decreasing sedimentary suboxia inland. The distribution of P fractions and C:P ratios reflect the presence of relatively labile organic matter in upstream surface sediments. Sediment C and P geochemistry is influenced by site-specific particulate organic matter sources, the sorptive power of the sedimentary material present, physical forcing, and early diagenetic transformations presumably driven by Corganic oxidation. ?? 2005 Estuarine Research Federation.

A continuous 250,000 yr record of oxygen and carbon isotopes in ostracode and bulk-sediment carbonate from Bear Lake, Utah-Idaho

USGS Publications Warehouse

Bright, Jordon; Kaufman, D.S.; Forester, R.M.; Dean, W.E.

2006-01-01

Oxygen and carbon isotopes from a continuous, 120-m-long, carbonate-rich core from Bear Lake, Utah-Idaho, document dramatic fluctuations in the hydrologic budget of the lake over the last 250,000 yr. Isotopic analyses of bulk sediment samples capture millennial-scale variability. Ostracode calcite was analyzed from 78 levels, mainly from the upper half of the core where valves are better preserved, to compare the isotopic value of purely endogenic carbonate with the bulk sediment, which comprises both endogenic and detrital components. The long core exhibits three relatively brief intervals with abundant endogenic aragonite (50??10%) and enriched ??18O and ??13C. These intervals are interpreted as warm/dry periods when the lake retracted into a topographically closed basin. We correlate these intervals with the interglacial periods of marine oxygen-isotope stages 1, 5e, and 7a, consistent with the presently available geochronological control. During most of the time represented by the core, the lake was fresher than the modern lake, as evidenced by depleted ??18O and ??13C in bulk-sediment carbonate. ?? 2006 Elsevier Ltd. All rights reserved.

Performance of a novel multiple-signal luminescence sediment tracing method

NASA Astrophysics Data System (ADS)

Reimann, Tony

2014-05-01

Optically Stimulated Luminescence (OSL) is commonly used for dating sediments. Luminescence signals build up due to exposure of mineral grains to natural ionizing radiation, and are reset when these grains are exposed to (sun)light during sediment transport and deposition. Generally, luminescence signals can be read in two ways, potentially providing information on the burial history (dating) or the transport history (sediment tracing) of mineral grains. In this study we use a novel luminescence measurement procedure (Reimann et al., submitted) that simultaneously monitors six different luminescence signals from the same sub-sample (aliquot) to infer the transport history of sand grains. Daylight exposure experiments reveal that each of these six signals resets (bleaches) at a different rate, thus allowing to trace the bleaching history of the sediment in six different observation windows. To test the feasibility of luminescence sediment tracing in shallow-marine coastal settings we took eight sediment samples from the pilot mega-nourishment Zandmotor in Kijkduin (South-Holland). This site provides relatively controlled conditions as the morphological evolution of this nourishment is densely monitored (Stive et al., 2013). After sampling the original nourishment source we took samples along the seaward facing contour of the spit that was formed from August 2011 (start of nourishment) to June 2012 (sampling). It is presumed that these samples originate from the source and were transported and deposited within the first year after construction. The measured luminescence of a sediment sample was interpolated onto the daylight bleaching curve of each signal to assign the Equivalent Exposure Time (EET) to a sample. The EET is a quantitative measure of the full daylight equivalent a sample was exposed to during sediment transport, i.e. the higher the EET the longer the sample has been transported or the more efficient it has been exposed to day-light during sediment transport. The EET increases with increasing distance from the nourishment source, indicating that our method is capable to quantify sediment transport distances. We furthermore observed that the EET of an aeolian analogue is orders of magnitudes higher than those of the water-lain transported Zandmotor samples, suggesting that our approach is also able to differentiate between different modes of coastal sediment transport. This new luminescence approach offers new possibilities to decipher the sedimentation history of palaeo-environmental archives e.g. in coastal, fluvial or aeolian settings. References: Reimann, T.et al. Quantifying the degreeof bleaching during sediment transport using a polymineral multiple-signalluminescence approach. Submitted. Stive, M.J.F. et al. 2013. A New Alternative to Saving Our Beaches from Sea-Level Rise: The SandEngine. Journal of Coastal research 29, 1001-1008.

Distribution of trace elements in the coastal sea sediments of Maslinica Bay, Croatia

NASA Astrophysics Data System (ADS)

Mikulic, Nenad; Orescanin, Visnja; Elez, Loris; Pavicic, Ljiljana; Pezelj, Durdica; Lovrencic, Ivanka; Lulic, Stipe

2008-02-01

Spatial distributions of trace elements in the coastal sea sediments and water of Maslinica Bay (Southern Adriatic), Croatia and possible changes in marine flora and foraminifera communities due to pollution were investigated. Macro, micro and trace elements’ distributions in five granulometric fractions were determined for each sediment sample. Bulk sediment samples were also subjected to leaching tests. Elemental concentrations in sediments, sediment extracts and seawater were measured by source excited energy dispersive X-ray fluorescence (EDXRF). Concentrations of the elements Cr, Cu, Zn, and Pb in bulk sediment samples taken in the Maslinica Bay were from 2.1 to over six times enriched when compared with the background level determined for coarse grained carbonate sediments. A low degree of trace elements leaching determined for bulk sediments pointed to strong bonding of trace elements to sediment mineral phases. The analyses of marine flora pointed to higher eutrophication, which disturbs the balance between communities and natural habitats.

Evidence for iron-sulfate coupling in salt marsh sediments

NASA Astrophysics Data System (ADS)

Mills, Jennifer; Antler, Gilad; Turchyn, Alexandra

2014-05-01

Organic carbon burial in shallow marine sediments represents an important net sink in the global carbon cycle. Microbially mediated oxidation of organic matter in oxic, suboxic, and anoxic sediments however, prevents the ultimate burial of organic carbon and its removal from the surface of the planet. Although the subsurface transformations of organic carbon have been studied extensively, an enigmatic question remains: when organic matter is deposited, what determines whether it will be buried, reoxidized, or undergo methanogenesis? One hypothesis is that the sulfur cycle, due to the abundance of sulfate in many surface environments, dominates the subsurface oxidation or other fate of organic carbon. However, it has also been suggested that iron may in turn play a key role in determining the behavior of the sulfur cycle. To better understand the controls on these processes, we are using stable isotope and geochemical techniques to explore the microbially mediated oxidation of organic carbon in salt marsh sediments in North Norfolk, UK. In these sediments there is a high supply of organic carbon, iron, and sulfate (from diurnal tidal cycles). Thus these environments may provide insight into the nature of interactions between the carbon, iron, and sulfur cycles. A series of sampling missions was undertaken in the autumn and winter of 2013-2014. In subsurface fluid samples we observe very high ferrous iron concentrations (>1mM), indicative of extended regions of iron reduction (to over 30cm depth). Within these zones of iron reduction we would predict no sulfate reduction, and as expected δ34Ssulfate remains unchanged with depth. However, δ18Osulfate exhibits significant enrichments of up to 5 permil. This decoupling in the sulfur and oxygen isotopes of sulfate is suggestive of a sulfate recycling process in which sulfate is reduced to an intermediate sulfur species and subsequently reoxidized to sulfate. Taken together, these data suggest that microbial assemblages in these salt marsh sediments facilitate a cryptic cycling of sulfur, potentially mediated by iron species in the zone of iron reduction.

Occurrence of diarrhoeagenic Escherichia coli virulence genes in water and bed sediments of a river used by communities in Gauteng, South Africa.

PubMed

Abia, Akebe Luther King; Ubomba-Jaswa, Eunice; Momba, Maggy Ndombo Benteke

2016-08-01

In most developing countries, especially in Southern Africa, little is known about the presence of diarrhoeagenic Escherichia coli (DEC) pathotypes in riverbed sediments. The present study sought to investigate the presence of DEC virulence genes in riverbed sediments of the Apies River, a river used by many communities in Gauteng, South Africa. Water and sediment samples were collected from the river between July and August 2013 (dry season) and also between January and February 2014 (wet season) following standard procedures. Isolation of E. coli was done using the Colilert®-18 Quanti-Tray® 2000 system. DNA was extracted from E. coli isolates using the InstaGene™ matrix from Bio-Rad and used as template DNA for real-time PCR. Water pH, temperature, dissolved oxygen, electrical conductivity and turbidity were measured in situ. Over 59 % of 180 samples analysed were positive for at least one of the seven DEC virulence genes investigated. The eaeA gene was the most isolated gene (29.44 %) while the ipaH gene the least isolated (8.33 %). The ipaH gene (p = 0.012) and the ST gene (stIa, p = 0.0001, and stIb, p = 0.019) were positively correlated with temperature. The detection of diarrhoeagenic E. coli virulence genes in the sediments of the Apies River shows that the sediments of this river might not only be a reservoir of faecal indicator bacteria like E. coli but also pathogenic strains of this bacterium. These organisms could represent a public health risk for poor communities relying on this water source for various purposes such as drinking and recreational use. There is therefore an urgent need to monitor these DEC pathotypes especially in areas without adequate water supplies.

Combined mineralogical and EXAFS characterization of polluted sediments for the definition of technological variables and constraints

NASA Astrophysics Data System (ADS)

Brigatti, M. F.; Elmi, C.; Laurora, A.; Malferrari, D.; Medici, L.

2009-04-01

An extremely severe aspect, both from environmental and economic viewpoint, is the management of polluted sediments removed from drainage and irrigation canals. Canals, in order to retain their functionality over the time, need to have their beds, periodically cleaned from sediments there accumulating. The management of removed sediments is extremely demanding, also from an economical perspective, if these latter needs to be treated as dangerous waste materials, as stated in numerous international standards. Furthermore the disposal of such a large amount of material may introduce a significant environmental impact as well. An appealing alternative is the recovery or reuse of these materials, for example in brick and tile industry, after obviously the application of appropriate techniques and protocols that could render these latter no longer a threat for human health. The assessment of the effective potential danger for human health and ecosystem of sediments before and after treatment obviously requires both a careful chemical and mineralogical characterization and, even if not always considered in the international standards, the definition of the coordination shell of heavy metals dangerous for human health, as a function of their oxidation state and coordination (e.g. Cr and Pb), and introducing technological constraints or affecting the features of the end products. Fe is a good representative for this second category, as the features of the end product, such as color, strongly depend not only from Fe concentration but also from its oxidation state, speciation and coordination. This work will first of all provide mineralogical characterization of sediments from various sampling points of irrigation and drainage canals of Po river region in the north-eastern of Italy. Samples were investigated with various approaches including X-ray powder diffraction under non-ambient conditions, thermal analysis and EXAFS spectroscopy. Obtained results, and in particular EXAFS spectra were used to define and optimize the technological variables of the recovery process.

Chemical Warfare Materiel in Sediment at a Deep-Water Discarded Military Munitions Site

NASA Astrophysics Data System (ADS)

Briggs, C. W.; Bissonnette, M. C.; Edwards, M.; Shjegstad, S. M.

2016-12-01

Understanding the release and transformation of chemical agent (CA) at underwater discarded military munitions (DMM) sites is essential to determine the potential risk to human health and impact on the ocean environment; yet few studies have been conducted at sites in excess of 250 m, the depth at which most U.S. CA munitions were disposed. Maritime construction workers installing cables or pipelines at a CA DMM site, as well as fishermen and scientific researchers deploying bottom-contact gear, represent possible exposure pathways to human receptors. The Hawai`i Undersea Military Munitions Assessment (HUMMA) sought to characterize a historic munitions sea-disposal site at depths between 400-650 m. During the 2014 HUMMA Sampling Survey, the Jason 2 remotely operated vehicle was used to collect sediments within two meters of suspected World War II chemical munitions, confirmed to be 100-lb M47 series bombs containing sulfur mustard. When environmental media was brought to the surface, samples were screened for distilled sulfur mustard (HD) and related agent breakdown products (ABP) (collectively referred to as chemical warfare materiel [CWM]). Detectable concentrations of HD and/or its ABP 1,4-dithiane were found in sediments collected at all CA DMM sites; HD was also detected at two control sites. The location and extent of munitions casing deterioration strongly influenced the distribution and level of CWM in sediment. The interior of the casing contained levels of CWM orders of magnitudes higher than that observed in the surrounding sediment at one meter distance, indicating the majority of the CWM is hydrolyzed as it is released from the munitions casing and a fraction of the fill materiel persists in the environment for decades following disposal. Although the potential for future site users to become exposed to CWA in recovered sediments and debris exists, the level of risk is significantly mitigated by the depth and location of the sea-disposal site.

Seafloor Mapping and Benthic Habitats off Assateague Island National Seashore: can we Resolve any Effects of Superstorm Sandy?

NASA Astrophysics Data System (ADS)

Miller, D.; Trembanis, A. C.; Kennedy, E.; Rusch, H.; Rothermel, E.

2016-02-01

The National Park Service has partnered with faculty and students at the University of Delaware to map the length of Assateague Island and sample benthic communities there for two purposes: (1) to provide a complete inventory of benthic habitats and their biota, and (2) to determine if any changes from a pre-storm survey can be ascribed to Superstorm Sandy in 2012. During the 2014 and 2015 field seasons over 75 km2 of high-resolution ( 50 cm/pixel) side-scan sonar and collocated bathymetry were collected with a surface vessel mounted bathy side-scan sonar (EdgeTech 6205), spanning the shore from depths of less than 2 m out to a distance of approximately 1 nautical mile and depths of 10-12 m. Furthermore, we have resampled using standard methodology (modified Young grab and 0.5-mm sieve) a subset of the previously sampled benthic stations that represent all sediment classes identified in prior studies. Additionally, we have obtained novel data with our ROV and AUV assets, including finer scale bottom video and multibeam bathymetry, at specifically chosen locations in order to enhance understanding of the benthic habitat and bottom type changes. In addition to providing a habitat and faunal inventory for resource management purposes, we will compare our side scan and benthic survey data to the pre-storm 2011 data products with comparable coverage. To date we have found that ArcGIS and ENVI sediment classifications agree well with those from the 2011 study, but spatially we note more areas of finer sediments and less of gravel. As was expected, 2014 benthic assemblages differ significantly among sediment classes (PRIMER ANOSIM), and sediment class is the best predictor of the benthic community (PERMANOVA+ distance-based RDA). Our goal here is to use consistent analytical approaches to characterize changes that occur over season and inter-annual time scales. This is a critical step toward attributing sediment, habitat and biological changes to Superstorm Sandy.