Sample records for sequestering large amounts

  1. Faster growth in warmer winters for large trees in a Mediterranean-climate ecosystem

    Treesearch

    Seth W. Bigelow; Michael J. Papaik; Caroline Caum; Malcolm P. North

    2014-01-01

    Large trees (>76 cm breast-height diameter) are vital components of Sierra Nevada/Cascades mixed-conifer ecosystems because of their fire resistance, ability to sequester large amounts of carbon, and role as preferred habitat for sensitive species such as the California spotted owl. To investigate the likely performance of large trees in a rapidly changing...

  2. Carbon dioxide efficiency of terrestrial enhanced weathering.

    PubMed

    Moosdorf, Nils; Renforth, Phil; Hartmann, Jens

    2014-05-06

    Terrestrial enhanced weathering, the spreading of ultramafic silicate rock flour to enhance natural weathering rates, has been suggested as part of a strategy to reduce global atmospheric CO2 levels. We budget potential CO2 sequestration against associated CO2 emissions to assess the net CO2 removal of terrestrial enhanced weathering. We combine global spatial data sets of potential source rocks, transport networks, and application areas with associated CO2 emissions in optimistic and pessimistic scenarios. The results show that the choice of source rocks and material comminution technique dominate the CO2 efficiency of enhanced weathering. CO2 emissions from transport amount to on average 0.5-3% of potentially sequestered CO2. The emissions of material mining and application are negligible. After accounting for all emissions, 0.5-1.0 t CO2 can be sequestered on average per tonne of rock, translating into a unit cost from 1.6 to 9.9 GJ per tonne CO2 sequestered by enhanced weathering. However, to control or reduce atmospheric CO2 concentrations substantially with enhanced weathering would require very large amounts of rock. Before enhanced weathering could be applied on large scales, more research is needed to assess weathering rates, potential side effects, social acceptability, and mechanisms of governance.

  3. Meeting global policy commitments carbon sequestration and southern pine forests

    Treesearch

    Kurt H. Johnsen; David N. Wear; R. Oren; R.O. Teskey; Felipe Sanchez; Rodney E. Will; John Butnor; D. Markewitz; D. Richter; T. Rials; H.L. Allen; J. Seiler; D. Ellsworth; Christopher Maier; G. Katul; P.M. Dougherty

    2001-01-01

    In managed forests, the amount of carbon further sequestered will be determined by (1) the increased amount of carbon in standing biomass (resulting from land-use changes and increased productivity); (2) the amount of recalcitrant carbon remaining below ground at the end of rotations; and (3) the amount of carbon sequestered in products created from harvested wood....

  4. Agroforestry: working trees for sequestering carbon on agricultural lands

    Treesearch

    M.M. Schoeneberger

    2008-01-01

    Agroforestry is an appealing option for sequestering carbon on agricultural lands because it can sequester significant amounts of carbon while leaving the bulk of the land in agricultural production. Simultaneously, it can help landowners and society address many other issues facing these lands, such as economic diversification, biodiversity, and water quality....

  5. Agroforestry-working trees for sequestering carbon on ag-lands

    Treesearch

    Michele M. Schoeneberger

    2005-01-01

    Agroforestry is an appealing option for sequestering carbon on agricultural lands because it can sequester significant amounts of carbon whle leaving the bulk of the land in agricultural production. Simultaneously, it can help landowners and society address many other issues, such as economic diversification, biodiversity, and water quality, facing these lands....

  6. A thermal and chemical degradation approach to decipher pristane and phytane precursors in sedimentary organic matter

    USGS Publications Warehouse

    Koopmans, M.P.; Rijpstra, W.I.C.; Klapwijk, M.M.; De Leeuw, J. W.; Lewan, M.D.; Sinninghe, Damste J.S.

    1999-01-01

    A thermal and chemical degradation approach was followed to determine the precursors of pristane (Pr) and phytane (Ph) in samples from the Gessoso-solfifera, Ghareb and Green River Formations. Hydrous pyrolysis of these samples yields large amounts of Pr and Ph carbon skeletons, indicating that their precursors are predominantly sequestered in high-molecular-weight fractions. However, chemical degradation of the polar fraction and the kerogen of the unheated samples generally does not release large amounts of Pr and Ph. Additional information on the precursors of Pr and Ph is obtained from flash pyrolysis analyses of kerogens and residues after hydrous pyrolysis and after chemical degradation. Multiple precursors for Pr and Ph are recognised in these three samples. The main increase of the Pr/Ph ratio with increasing maturation temperature, which is associated with strongly increasing amounts of Pr and Ph, is probably due to the higher amount of precursors of Pr compared to Ph, and not to the different timing of generation of Pr and Ph.A thermal and chemical degradation approach was followed to determine the precursors of pristane (Pr) and phytane (Ph) in samples from the Gessoso-solfifera, Ghareb and Green River Formations. Hydrous pyrolysis of these samples yields large amounts of Pr and Ph carbon skeletons, indicating that their precursors are predominantly sequestered in high-molecular-weight fractions. However, chemical degradation of the polar fraction and the kerogen of the unheated samples generally does not release large amounts of Pr and Ph. Additional information on the precursors of Pr and Ph is obtained from flash pyrolysis analyses of kerogens and residues after hydrous pyrolysis and after chemical degradation. Multiple precursors for Pr and Ph are recognised in these three samples. The main increase of the Pr/Ph ratio with increasing maturation temperature, which is associated with strongly increasing amounts of Pr and Ph, is probably due to the higher amount of precursors of Pr compared to Ph, and not to the different timing of generation of Pr and Ph.

  7. Post-fire management regimes affect carbon sequestration and storage in a Sierra Nevada mixed conifer forest

    Treesearch

    Elizabeth M. Powers; John D. Marshall; Jianwei Zhang; Liang Wei

    2013-01-01

    Forests mitigate climate change by sequestering CO2 from the atmosphere and accumulating it in biomass storage pools. However, in dry conifer forests, fire occasionally returns large quantities of CO2 to the atmosphere. Both the total amount of carbon stored and its susceptibility to loss may be altered by post-fire land...

  8. Aboveground tree growth varies with belowground carbon allocation in a tropical rainforest environment

    Treesearch

    J.W. Raich; D.A. Clark; L. Schwendenmann; Tana Wood

    2014-01-01

    Young secondary forests and plantations in the moist tropics often have rapid rates of biomass accumulation and thus sequester large amounts of carbon. Here, we compare results from mature forest and nearby 15–20 year old tree plantations in lowland Costa Rica to evaluate differences in allocation of carbon to aboveground production and root systems. We found that the...

  9. The role of old forests and big trees in forest carbon sequestration in the Pacific Northwest

    Treesearch

    Andrew N. Gray

    2015-01-01

    Forest ecosystems are an important component of the global carbon (C) cycle. Recent research has indicated that large trees in general, and old-growth forests in particular, sequester substantial amounts of C annually. C sequestration rates are thought to peak and decline with stand age but the timing and controls are not well-understood. The objectives of this study...

  10. Boreal Forests Sequester Large Amounts of Mercury over Millennial Time Scales in the Absence of Wildfire.

    PubMed

    Giesler, Reiner; Clemmensen, Karina E; Wardle, David A; Klaminder, Jonatan; Bindler, Richard

    2017-03-07

    Alterations in fire activity due to climate change and fire suppression may have profound effects on the balance between storage and release of carbon (C) and associated volatile elements. Stored soil mercury (Hg) is known to volatilize due to wildfires and this could substantially affect the land-air exchange of Hg; conversely the absence of fires and human disturbance may increase the time period over which Hg is sequestered. Here we show for a wildfire chronosequence spanning over more than 5000 years in boreal forest in northern Sweden that belowground inventories of total Hg are strongly related to soil humus C accumulation (R 2 = 0.94, p < 0.001). Our data clearly show that northern boreal forest soils have a strong sink capacity for Hg, and indicate that the sequestered Hg is bound in soil organic matter pools accumulating over millennia. Our results also suggest that more than half of the Hg stock in the sites with the longest time since fire originates from deposition predating the onset of large-scale anthropogenic emissions. This study emphasizes the importance of boreal forest humus soils for Hg storage and reveals that this pool is likely to persist over millennial time scales in the prolonged absence of fire.

  11. β-CD-dextran polymer for efficient sequestration of cholesterol from phospholipid bilayers: Mechanistic and safe-toxicity investigations.

    PubMed

    Stelzl, Dominik; Nielsen, Thorbjørn Terndrup; Hansen, Terkel; di Cagno, Massimiliano

    2015-12-30

    The aim of this work was to investigate the suitability of β-cyclodextrin-dextran (BCD-dextran) polymer as cholesterol sequestering agent in vitro. For this purpose, BCD-dextran-cholesterol complexation was studied by phase solubility studies as well as with a specifically designed in vitro model based on giant unilamellar vesicles (GUVs) to evaluate the ability of this polymer to sequestrate cholesterol from phospholipid bilayers. Cholesterol-sequestering ability of BCD-dextran was also investigated on different cell lines relevant for the hematopoietic system and results were correlated to cells toxicity. BCD-dextran polymer was capable of extracting significant amount of cholesterol from phospholipid bilayers and to a higher extent in comparison to available β-cyclodextrins (BCDs). The ability of BCD-dextran in sequestering cholesterol resulted also very high on cell lines relevant for the hematopoietic system. Moreover, BCD-dextran resulted less toxic on cell cultures due to higher selectivity in sequestering cholesterol in comparison to MBCD (that sequestrated also significant amounts of cholesteryl esters). In conclusion, BCD-dextran resulted an extremely efficient cholesterol-sequestering agent and BCD-dextran resulted more selective to cholesterol extraction in comparison to other BCDs (therefore of lower cytotoxicity). This phenomenon might play a key role to develop an efficient treatment for hypercholesterolemia based on cholesterol segregation. Copyright © 2015 Elsevier B.V. All rights reserved.

  12. Soil carbon stocks in Sarawak, Malaysia.

    PubMed

    Padmanabhan, E; Eswaran, H; Reich, P F

    2013-11-01

    The relationship between greenhouse gas emission and climate change has led to research to identify and manage the natural sources and sinks of the gases. CO2, CH4, and N2O have an anthropic source and of these CO2 is the least effective in trapping long wave radiation. Soil carbon sequestration can best be described as a process of removing carbon dioxide from the atmosphere and relocating into soils in a form that is not readily released back into the atmosphere. The purpose of this study is to estimate carbon stocks available under current conditions in Sarawak, Malaysia. SOC estimates are made for a standard depth of 100 cm unless the soil by definition is less than this depth, as in the case of lithic subgroups. Among the mineral soils, Inceptisols tend to generally have the highest carbon contents (about 25 kg m(-2) m(-1)), while Oxisols and Ultisols rate second (about 10-15 kg m(-2) m(-1)). The Oxisols store a good amount of carbon because of an appreciable time-frame to sequester carbon and possibly lower decomposition rates for the organic carbon that is found at 1m depths. Wet soils such as peatlands tend to store significant amounts of carbon. The highest values estimated for such soils are about 114 kg m(-2) m(-1). Such appreciable amounts can also be found in the Aquepts. In conclusion, it is pertinent to recognize that degradation of the carbon pool, just like desertification, is a real process and that this irreversible process must be addressed immediately. Therefore, appropriate soil management practices should be instituted to sequester large masses of soil carbon on an annual basis. This knowledge can be used effectively to formulate strategies to prevent forest fires and clearing: two processes that can quickly release sequestered carbon to the atmosphere in an almost irreversible manner. Copyright © 2013 Elsevier B.V. All rights reserved.

  13. Nitrogen Deposition: A Component of Global Change Analyses

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Norby, Richard J.

    1997-12-31

    The global cycles of carbon and nitrogen are being perturbed by human activities that increase the transfer from large pools of nonreactive forms of the elements to reactive forms that are essential to the functioning of the terrestrial biosphere. The cycles are closely linked at all scales, and global change analyses must consider carbon and nitrogen cycles together. The increasing amount of nitrogen originating from fossil fuel combustion and deposited to terrestrial ecosystems as nitrogen oxides could increase the capacity of ecosystems to sequester carbon thereby removing some of the excess carbon dioxide from the atmosphere and slowing the developmentmore » of greenhouse warming. Several global and ecosystem models have calculated the amount of carbon sequestration that can be attributed to nitrogen deposition based on assumptions about the allocation of nitrogen among ecosystem components with different carbon-nitrogen ratios. They support the premise that nitrogen deposition is responsible for a an increasing terrestrial carbon sink since industrialization began, but there are large uncertainties related to the continued capacity of ecosystems to retain exogenous nitrogen. Whether terrestrial ecosystems continue to sequester additional carbon will depend in part on their response to increasing atmospheric carbon dioxide concentrations, which is widely thought to be constrained by limited nitrogen availability. Ecosystem models generally support the conclusion that the responses of ecosystems to increasing concentrations of carbon dioxide will be larger, and the range of possible responses will be wider, in ecosystems with increased nitrogen inputs originating as atmospheric deposition.« less

  14. Uncertainty In Greenhouse Gas Emissions On Carbon Sequestration In Coastal and Freshwater Wetlands of the Mississippi River Delta: A Subsiding Coastline as a Proxy for Future Global Sea Level

    NASA Astrophysics Data System (ADS)

    White, J. R.; DeLaune, R. D.; Roy, E. D.; Corstanje, R.

    2014-12-01

    The highly visible phenomenon of wetland loss in coastal Louisiana (LA) is examined through the prism of carbon accumulation, wetland loss and greenhouse gas (GHG) emissions. The Mississippi River Deltaic region experiences higher relative sea level rise due to coupled subsidence and eustatic sea level rise allowing this region to serve as a proxy for future projected golbal sea level rise. Carbon storage or sequestration in rapidly subsiding LA coastal marsh soils is based on vertical marsh accretion and areal change data. While coastal marshes sequester significant amount of carbon through vertical accretion, large amounts of carbon, previously sequested in the soil profile is lost through annual deterioration of these coastal marshes as well as through GHG emissions. Efforts are underway in Louisiana to access the carbon credit market in order to provide significant funding for coastal restoration projects. However, there is very large uncertainty on GHG emission rates related to both marsh type and temporal (daily and seasonal) effects. Very little data currently exists which addresses this uncertainty which can significantly affect the carbon credit value of a particular wetland system. We provide an analysis of GHG emission rates for coastal freshwater, brackish and and salt marshes compared to the net soil carbon sequestration rate. Results demonstrate that there is very high uncertainty on GHG emissions which can substantially alter the carbon credit value of a particular wetland system.

  15. Sevelamer and other anion-exchange resins in the prevention and treatment of hyperphosphataemia in chronic renal failure.

    PubMed

    Wrong, Oliver; Harland, Clive

    2007-01-01

    Sevelamer, or more precisely 'sevelamer hydrochloride', is a weakly basic anion-exchange resin in the chloride form that was introduced in 1997 for the treatment of the hyperphosphataemia of patients with end-stage renal failure, usually those on long-term haemodialysis. The rationale for this therapy was that sevelamer would sequester phosphate within the gastrointestinal tract, so preventing its absorption and enhancing its faecal excretion. Over the succeeding years, large numbers of patients have been treated with sevelamer, and it has fulfilled expectations in helping to control the hyperphosphataemia of end-stage renal failure. However, it is only one of many anion-exchange resins that could be used for this purpose, some of which are currently available for clinical use and are much less costly than sevelamer. Theoretical considerations suggest that some of these other resins might be at least as efficient as sevelamer in sequestering phosphate in the gastrointestinal tract. Neither sevelamer, nor any of these other agents, has been submitted to a proper metabolic balance study to measure the amount of phosphate sequestered by the resin in the bowel, and without this information it is impossible to judge which is the ideal resin for this purpose. Copyright 2007 S. Karger AG, Basel.

  16. Budget Issues: Effects of the Fiscal Year 1990 Sequester on the Department of Education. Fact Sheet for the Chairman, Committee on the Budget, House of Representatives.

    ERIC Educational Resources Information Center

    General Accounting Office, Washington, DC.

    The Balanced Budget and Emergency Deficit Control Act of 1985, as amended, establishes deficit targets to lead to a balanced unified budget by fiscal year 1993. If the Office of Management and Budget projects a deficit in excess of the target amount plus $10 billion, the President must issue a sequester order to reduce budget resources…

  17. Accelerated weathering of limestone for CO2 mitigation: Opportunities for the stone and cement industries

    USGS Publications Warehouse

    Langer, William H.; San, Juan A.; Rau, Greg H.; Caldeira, Ken

    2009-01-01

    Large amounts of limestone fines co-produced during the processing of crushed limestone may be useful in the sequestration of carbon dioxide (CO2). Accelerated weathering of limestone (AWL) is proposed as a low-tech method to capture and sequester CO2 from fossil fuel-fired power plants and other point sources such as cement manufacturing. AWL reactants are readily available, inexpensive and environmentally benign. Waste CO2 is hydrated with water to produce carbonic acid. This reacts with and is neutralized by limestone fines, thus converting CO2 gas to dissolved calcium bicarbonate.

  18. Apparatus for extracting and sequestering carbon dioxide

    DOEpatents

    Rau, Gregory H [Castro Valley, CA; Caldeira, Kenneth G [Livermore, CA

    2010-02-02

    An apparatus and method associated therewith to extract and sequester carbon dioxide (CO.sub.2) from a stream or volume of gas wherein said apparatus hydrates CO.sub.2 and reacts the resulting carbonic acid with carbonate. Suitable carbonates include, but are not limited to, carbonates of alkali metals and alkaline earth metals, preferably carbonates of calcium and magnesium. Waste products are metal cations and bicarbonate in solution or dehydrated metal salts, which when disposed of in a large body of water provide an effective way of sequestering CO.sub.2 from a gaseous environment.

  19. Method for extracting and sequestering carbon dioxide

    DOEpatents

    Rau, Gregory H.; Caldeira, Kenneth G.

    2005-05-10

    A method and apparatus to extract and sequester carbon dioxide (CO.sub.2) from a stream or volume of gas wherein said method and apparatus hydrates CO.sub.2, and reacts the resulting carbonic acid with carbonate. Suitable carbonates include, but are not limited to, carbonates of alkali metals and alkaline earth metals, preferably carbonates of calcium and magnesium. Waste products are metal cations and bicarbonate in solution or dehydrated metal salts, which when disposed of in a large body of water provide an effective way of sequestering CO.sub.2 from a gaseous environment.

  20. Invasive alien pests threaten the carbon stored in Europe's forests.

    PubMed

    Seidl, Rupert; Klonner, Günther; Rammer, Werner; Essl, Franz; Moreno, Adam; Neumann, Mathias; Dullinger, Stefan

    2018-04-24

    Forests mitigate climate change by sequestering large amounts of carbon (C). However, forest C storage is not permanent, and large pulses of tree mortality can thwart climate mitigation efforts. Forest pests are increasingly redistributed around the globe. Yet, the potential future impact of invasive alien pests on the forest C cycle remains uncertain. Here we show that large parts of Europe could be invaded by five detrimental alien pests already under current climate. Climate change increases the potential range of alien pests particularly in Northern and Eastern Europe. We estimate the live C at risk from a potential future invasion as 1027 Tg C (10% of the European total), with a C recovery time of 34 years. We show that the impact of introduced pests could be as severe as the current natural disturbance regime in Europe, calling for increased efforts to halt the introduction and spread of invasive alien species.

  1. Inert Reassessment Document for Ethylenediaminetetracetric acid (EDTA)

    EPA Pesticide Factsheets

    EDTA is a chelating agent. Its ability to bind heavy metal ions can be used to sequester these trace metals. However, trace amounts of various metals are necessary for the proper functioning of the body.

  2. Minimum cost strategies for sequestering carbon in forests.

    Treesearch

    Darius M. Adams; Ralph J. Alig; Bruce A. McCarl; John M. Callaway; Steven M. Winnett

    1999-01-01

    This paper examines the costs of meeting explicit targets for increments of carbon sequestered in forests when both forest management decisions and the area of forests can be varied. Costs are estimated as welfare losses in markets for forest and agricultural products. Results show greatest change in management actions when targets require large near-term flux...

  3. Fire and the distribution and uncertainty of carbon sequestered as above-ground tree biomass in Yosemite and Sequoia & Kings Canyon National Parks

    USGS Publications Warehouse

    Lutz, James A.; Matchett, John R.; Tarnay, Leland W.; Smith, Douglas F.; Becker, Kendall M.L.; Furniss, Tucker J.; Brooks, Matthew L.

    2017-01-01

    Fire is one of the principal agents changing forest carbon stocks and landscape level distributions of carbon, but few studies have addressed how accurate carbon accounting of fire-killed trees is or can be. We used a large number of forested plots (1646), detailed selection of species-specific and location-specific allometric equations, vegetation type maps with high levels of accuracy, and Monte Carlo simulation to model the amount and uncertainty of aboveground tree carbon present in tree species (hereafter, carbon) within Yosemite and Sequoia & Kings Canyon National Parks. We estimated aboveground carbon in trees within Yosemite National Park to be 25 Tg of carbon (C) (confidence interval (CI): 23–27 Tg C), and in Sequoia & Kings Canyon National Park to be 20 Tg C (CI: 18–21 Tg C). Low-severity and moderate-severity fire had little or no effect on the amount of carbon sequestered in trees at the landscape scale, and high-severity fire did not immediately consume much carbon. Although many of our data inputs were more accurate than those used in similar studies in other locations, the total uncertainty of carbon estimates was still greater than ±10%, mostly due to potential uncertainties in landscape-scale vegetation type mismatches and trees larger than the ranges of existing allometric equations. If carbon inventories are to be meaningfully used in policy, there is an urgent need for more accurate landscape classification methods, improvement in allometric equations for tree species, and better understanding of the uncertainties inherent in existing carbon accounting methods.

  4. The role of protected areas in land use/land cover change and the carbon cycle in the conterminous United States

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lu, Xiaoliang; Zhou, Yuyu; Liu, Yaling

    Protected areas (PAs) cover about 22% of the conterminous United States. Understanding their role on historical land use and land cover change (LULCC) and on the carbon cycle is essential to provide guidance for environmental policies. In this study, we compiled historical LULCC and PAs data to explore these interactions within the terrestrial ecosystem model (TEM). We found that intensive LULCC occurred in the conterminous United States from 1700 to 2005. More than 3 million km2 of forest, grassland and shrublands were converted into agricultural lands, which caused 10,607 Tg C release from land ecosystems to atmosphere. PAs had experiencedmore » little LULCC as they were generally established in the 20th century after most of the agricultural expansion had occurred. PAs initially acted as a carbon source due to land use legacies, but their accumulated carbon budget switched to a carbon sink in the 1960s, sequestering an estimated 1,642 Tg C over 1700–2005, or 13.4% of carbon losses in non-PAs. We also find that PAs maintain larger carbon stocks and continue sequestering carbon in recent years (2001–2005), but at a lower rate due to increased heterotrophic respiration as well as lower productivity associated to aging ecosystems. It is essential to continue efforts to maintain resilient, biodiverse ecosystems and avoid large-scale disturbances that would release large amounts of carbon in PAs.« less

  5. Rocks Here Sequester Some of Mars Early Atmosphere

    NASA Image and Video Library

    2015-09-02

    This view combines information from two instruments on NASA's Mars Reconnaissance Orbiter to map color-coded composition over the shape of the ground in a small portion of the Nili Fossae plains region of Mars' northern hemisphere. This site is part of the largest known carbonate-rich deposit on Mars. In the color coding used for this map, green indicates a carbonate-rich composition, brown indicates olivine-rich sands, and purple indicates basaltic composition. Carbon dioxide from the atmosphere on early Mars reacted with surface rocks to form carbonate, thinning the atmosphere by sequestering the carbon in the rocks. An analysis of the amount of carbon contained in Nili Fossae plains estimated the total at no more than twice the amount of carbon in the modern atmosphere of Mars, which is mostly carbon dioxide. That is much more than in all other known carbonate on Mars, but far short of enough to explain how Mars could have had a thick enough atmosphere to keep surface water from freezing during a period when rivers were cutting extensive valley networks on the Red Planet. Other possible explanations for the change from an era with rivers to dry modern Mars are being investigated. This image covers an area approximately 1.4 miles (2.3 kilometers) wide. A scale bar indicates 500 meters (1,640 feet). The full extent of the carbonate-containing deposit in the region is at least as large as Delaware and perhaps as large as Arizona. The color coding is from data acquired by the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM), in observation FRT0000C968 made on Sept. 19, 2008. The base map showing land shapes is from the High Resolution Imaging Science Experiment (HiRISE) camera. It is one product from HiRISE observation ESP_010351_2020, made July 20, 2013. http://photojournal.jpl.nasa.gov/catalog/PIA19817

  6. Measuring the decomposition of organic carbon sequestered by salt marsh sediment

    NASA Astrophysics Data System (ADS)

    Light, T.; Mctigue, N.; Currin, C.

    2016-12-01

    As atmospheric carbon dioxide concentrations continue to rise, salt marshes are increasingly being recognized as a natural carbon sink, for large amounts of organic carbon are sequestered by salt marsh sediments. However, little is known regarding the fate of this "blue carbon" after salt marsh sediment is disturbed via erosion or lost due to sea level rise. This investigation explored novel methodologies for determining the lability of carbon sequestered by salt marsh sediment. Sediment cores were collected from a Spartina alterniflora-dominated marsh in Camp Lejeune, NC, and elemental analysis revealed that the upper 76 cm of sediment at the site contains a total carbon stock of 28.4 kg /m2. Sediment ranging from 251-545 years old, as determined through radiocarbon dating, was incubated under sub-aerial and aqueous conditions for 18 days and 25 days respectively. Carbon dioxide flux measurements revealed that shallower sediment organic matter decomposed more rapidly than deeper sediment in sub-aerial incubations, but decomposition was fairly slow in both treatments. No significant organic matter decomposition was observed in the aqueous incubations, as revealed by analyses of organic carbon remaining after the incubation period. The aqueous incubation included a treatment that had been "primed" with highly labile yeast extract, but no significant priming effect was observed over 25 days. While further investigation on the fate of this sediment carbon is needed, these preliminary findings indicate that salt marshes facilitate long-term carbon sequestration even after disturbances. This in turn supports the argument for mitigating anthropogenic carbon dioxide emissions through salt marsh restoration, and supports a policy of preserving and conserving coastal wetlands for this valuable ecosystem service.

  7. Dietary alkaloid sequestration in a poison frog: an experimental test of alkaloid uptake in Melanophryniscus stelzneri (Bufonidae).

    PubMed

    Hantak, Maggie M; Grant, Taran; Reinsch, Sherri; McGinnity, Dale; Loring, Marjorie; Toyooka, Naoki; Saporito, Ralph A

    2013-12-01

    Several lineages of brightly colored anurans independently evolved the ability to secrete alkaloid-containing defensive chemicals from granular glands in the skin. These species, collectively referred to as 'poison frogs,' form a polyphyletic assemblage that includes some species of Dendrobatidae, Mantellidae, Myobatrachidae, Bufonidae, and Eleutherodactylidae. The ability to sequester alkaloids from dietary arthropods has been demonstrated experimentally in most poison frog lineages but not in bufonid or eleutherodactylid poison frogs. As with other poison frogs, species of the genus Melanophryniscus (Bufonidae) consume large numbers of mites and ants, suggesting they might also sequester defensive alkaloids from dietary sources. To test this hypothesis, fruit flies dusted with alkaloid/nutritional supplement powder were fed to individual Melanophryniscus stelzneri in two experiments. In the first experiment, the alkaloids 5,8-disubstituted indolizidine 235B' and decahydroquinoline were administered to three individuals for 104 days. In the second experiment, the alkaloids 3,5-disubstituted indolizidine 239Q and decahydroquinoline were given to three frogs for 153 days. Control frogs were fed fruit flies dusted only with nutritional supplement. Gas chromatography/mass spectrometry analyses revealed that skin secretions of all experimental frogs contained alkaloids, whereas those of all control frogs lacked alkaloids. Uptake of decahydroquinoline was greater than uptake of 5,8-disubstituted indolizidine, and uptake of 3,5-disubstituted indolizidine was greater than uptake of decahydroquinoline, suggesting greater uptake efficiency of certain alkaloids. Frogs in the second experiment accumulated a greater amount of alkaloid, which corresponds to the longer duration and greater number of alkaloid-dusted fruit flies that were consumed. These findings provide the first experimental evidence that bufonid poison frogs sequester alkaloid-based defenses from dietary sources.

  8. Carbon sequestration associated to the land-use and land-cover changes in the forestry sector in Southern Brazil

    NASA Astrophysics Data System (ADS)

    Ronquim, Carlos C.; Silva, Ramon F. B.; de Figueiredo, Eduardo B.; Bordonal, Ricardo O.; de C. Teixeira, Antônio H.; Cochasrk, Thomas C. D.; Leivas, Janice F.

    2016-10-01

    We studied the Paraíba do Sul river watershed, São Paulo state (PSWSP), Southeastern Brazil, in order to assess the land use and cover (LULC) and their implications to the amount of carbon (C) stored in the forest cover between the years 1985 and 2015. The region covers an area of 1,395,975 ha. We used images made by the Operational Land Imager (OLI) sensor (OLI/Landsat-8) to produce mappings, and image segmentation techniques to produce vectors with homogeneous characteristics. The training samples and the samples used for classification and validation were collected from the segmented image. To quantify the C stocked in aboveground live biomass (AGLB), we used an indirect method and applied literature-based reference values. The recovery of 205,690 ha of a secondary Native Forest (NF) after 1985 sequestered 9.7 Tg (Teragram) of C. Considering the whole NF area (455,232 ha), the amount of C accumulated along the whole watershed was 35.5 Tg, and the whole Eucalyptus crop (EU) area (113,600 ha) sequestered 4.4 Tg of C. Thus, the total amount of C sequestered in the whole watershed (NF + EU) was 39.9 Tg of C or 145.6 Tg of CO2, and the NF areas were responsible for the largest C stock at the watershed (89%). Therefore, the increase of the NF cover contributes positively to the reduction of CO2 concentration in the atmosphere, and Reducing Emissions from Deforestation and Forest Degradation (REDD+) may become one of the most promising compensation mechanisms for the farmers who increased forest cover at their farms.

  9. Carbon Offset Forestry: Forecasting Ecosystem Effects (COFFEE) Project Implementation Plan

    EPA Science Inventory

    COFFEE will evaluate the environmental impacts of implementing various COF practices by using the amount of total ecosystem C (TEC) sequestered in forests as the integrative response metric. These evaluations will be done for current-climate and future-climate scenarios and will...

  10. Does Diffusion Sequester Heavy Metals in Old Contamination Soils?

    NASA Astrophysics Data System (ADS)

    Ma, J.; Jennings, A. A.

    2002-12-01

    Old soil contamination refers to soil contamination that has aged over a long period of time. For example, at some brownfields, the soil heavy metal contamination can be one hundred or more years old. When contamination is young, the heavy metals are bound relatively weakly to the soil. However, the speciation and/or mechanisms of association evolve with aging into much more stable forms. It also appears that the metals migrate deeper into the bulk soil matrix where they are less available to participate in surface-related phenomena. Previous research showed elevated heavy metal extraction result after the soil was pulverized, with all other experiment conditions remaining unchanged. This indicates the presence of sequestered heavy metal contamination within the large soil particles (aggregate). The mechanisms of sequestering are uncertain, but diffusion appears to be a major factor. There are two possible pathways of diffusion that can account for heavy metal sequestering: solid-state diffusion through the bulk aggregate or liquid-phase diffusion through micro-pores within the aggregate structure. The second diffusion mechanism can be coupled with sorption (or other surface-related phenomena) on the pore walls. The remediation of sequestered heavy metals is also impacted by diffusion. Grinding a soil significantly reduces its average particle size. This exposes more of its internal bulk volume to extraction and results in much shorter diffusion pathway for the sequestered heavy metals to be released. Evidence has illustrated that this both improves remediation efficiency and provides a method by which the degree of sequestering can be quantified. This paper will present the results of ongoing research that is developing methods to identify the mechanisms of, quantify the magnitude of and determine the relative importance of (i.e. risk analysis) heavy metals sequestered in old contamination soils.

  11. Accumulation of Reserve Carbohydrate by Rumen Protozoa and Bacteria in Competition for Glucose

    PubMed Central

    Denton, Bethany L.; Diese, Leanne E.; Firkins, Jeffrey L.

    2014-01-01

    The aim of this study was to determine if rumen protozoa could form large amounts of reserve carbohydrate compared to the amounts formed by bacteria when competing for glucose in batch cultures. We separated large protozoa and small bacteria from rumen fluid by filtration and centrifugation, recombined equal protein masses of each group into one mixture, and subsequently harvested (reseparated) these groups at intervals after glucose dosing. This method allowed us to monitor reserve carbohydrate accumulation of protozoa and bacteria individually. When mixtures were dosed with a moderate concentration of glucose (4.62 or 5 mM) (n = 2 each), protozoa accumulated large amounts of reserve carbohydrate; 58.7% (standard error of the mean [SEM], 2.2%) glucose carbon was recovered from protozoal reserve carbohydrate at time of peak reserve carbohydrate concentrations. Only 1.7% (SEM, 2.2%) was recovered in bacterial reserve carbohydrate, which was less than that for protozoa (P < 0.001). When provided a high concentration of glucose (20 mM) (n = 4 each), 24.1% (SEM, 2.2%) of glucose carbon was recovered from protozoal reserve carbohydrate, which was still higher (P = 0.001) than the 5.0% (SEM, 2.2%) glucose carbon recovered from bacterial reserve carbohydrate. Our novel competition experiments directly demonstrate that mixed protozoa can sequester sugar away from bacteria by accumulating reserve carbohydrate, giving protozoa a competitive advantage and stabilizing fermentation in the rumen. Similar experiments could be used to investigate the importance of starch sequestration. PMID:25548053

  12. On nutrients and trace metals: Effects from Enhanced Weathering

    NASA Astrophysics Data System (ADS)

    Amann, T.; Hartmann, J.

    2015-12-01

    The application of rock flour on suitable land ("Enhanced Weathering") is one proposed strategy to reduce the increase of atmospheric CO2 concentrations. At the same time it is an old and established method to add fertiliser and influence soil properties. Investigations of this method focused on the impact on the carbonate system, as well as on engineering aspects of a large-scale application, but potential side effects were never discussed quantitatively. We analysed about 120,000 geochemically characterised volcanic rock samples from the literature. Applying basic statistics, theoretical release rates of nutrients and potential contaminants by Enhanced Weathering were evaluated for typical rock types. Applied rock material can contain significant amounts of essential or beneficial nutrients (potassium, phosphorus, micronutrients). Their release can partly cover the demand of major crops like wheat, rice or corn, thereby increasing crop yield on degraded soils. However, the concentrations of considered elements are variable within a specific rock type, depending on the geological setting. High heavy metal concentrations are found in (ultra-) basic rocks, the class with the highest CO2 drawdown potential. More acidic rocks contain less or no critical amounts, but sequester less CO2. Findings show that the rock selection determines the capability to supply significant amounts of nutrients, which could partly substitute industrial mineral fertiliser usage. At the same time, the release of harmful trace element has to be considered. Through careful selection of regionally available rocks, benefits could be maximised and drawbacks reduced. The deployment of Enhanced Weathering to sequester CO2 and to ameliorate soils necessitates an ecosystem management, considering the release and fate of weathered elements in plants, soils and water. Cropland with degraded soils would benefit while having a net negative CO2 effect, while other carbon dioxide removal strategies, like afforestation, biofuel production, and biochar application could benefit from Enhanced Weathering side effects, as organic carbon pools are positively influenced.

  13. Sequestration, tissue distribution and developmental transmission of cyanogenic glucosides in a specialist insect herbivore.

    PubMed

    Zagrobelny, Mika; Olsen, Carl Erik; Pentzold, Stefan; Fürstenberg-Hägg, Joel; Jørgensen, Kirsten; Bak, Søren; Møller, Birger Lindberg; Motawia, Mohammed Saddik

    2014-01-01

    Considering the staggering diversity of bioactive natural products present in plants, insects are only able to sequester a small number of phytochemicals from their food plants. The mechanisms of how only some phytochemicals are sequestered and how the sequestration process takes place remains largely unknown. In this study the model system of Zygaena filipendulae (Lepidoptera) and their food plant Lotus corniculatus is used to advance the knowledge of insect sequestration. Z. filipendulae larvae are dependent on sequestration of the cyanogenic glucosides linamarin and lotaustralin from their food plant, and have a much lower fitness if reared on plants without these compounds. This study investigates the fate of the cyanogenic glucosides during ingestion, sequestration in the larvae, and in the course of insect ontogeny. To this purpose, double-labeled linamarin and lotaustralin were chemically synthesized carrying two stable isotopes, a (2)H labeled aglucone and a (13)C labeled glucose moiety. In addition, a small amount of (14)C was incorporated into the glucose residue. The isotope-labeled compounds were applied onto cyanogenic L. corniculatus leaves that were subsequently presented to the Z. filipendulae larvae. Following ingestion by the larvae, the destiny of the isotope labeled cyanogenic glucosides was monitored in different tissues of larvae and adults at selected time points, using radio-TLC and LC-MS analyses. It was shown that sequestered compounds are taken up intact, contrary to earlier hypotheses where it was suggested that the compounds would have to be hydrolyzed before transport across the gut. The uptake from the larval gut was highly stereo selective as the β-glucosides were retained while the α-glucosides were excreted and recovered in the frass. Sequestered compounds were rapidly distributed into all analyzed tissues of the larval body, partly retained throughout metamorphosis and transferred into the adult insect where they were distributed to all tissues. During subsequent mating, isotope labeled cyanogenic glucosides were transferred from the male to the female in the nuptial gift. Copyright © 2013 Elsevier Ltd. All rights reserved.

  14. Deployable micro-traps to sequester motile bacteria

    NASA Astrophysics Data System (ADS)

    di Giacomo, Raffaele; Krödel, Sebastian; Maresca, Bruno; Benzoni, Patrizia; Rusconi, Roberto; Stocker, Roman; Daraio, Chiara

    2017-04-01

    The development of strategies to reduce the load of unwanted bacteria is a fundamental challenge in industrial processing, environmental sciences and medical applications. Here, we report a new method to sequester motile bacteria from a liquid, based on passive, deployable micro-traps that confine bacteria using micro-funnels that open into trapping chambers. Even in low concentrations, micro-traps afford a 70% reduction in the amount of bacteria in a liquid sample, with a potential to reach >90% as shown by modelling improved geometries. This work introduces a new approach to contain the growth of bacteria without chemical means, an advantage of particular importance given the alarming growth of pan-drug-resistant bacteria.

  15. Deployable micro-traps to sequester motile bacteria

    PubMed Central

    Di Giacomo, Raffaele; Krödel, Sebastian; Maresca, Bruno; Benzoni, Patrizia; Rusconi, Roberto; Stocker, Roman; Daraio, Chiara

    2017-01-01

    The development of strategies to reduce the load of unwanted bacteria is a fundamental challenge in industrial processing, environmental sciences and medical applications. Here, we report a new method to sequester motile bacteria from a liquid, based on passive, deployable micro-traps that confine bacteria using micro-funnels that open into trapping chambers. Even in low concentrations, micro-traps afford a 70% reduction in the amount of bacteria in a liquid sample, with a potential to reach >90% as shown by modelling improved geometries. This work introduces a new approach to contain the growth of bacteria without chemical means, an advantage of particular importance given the alarming growth of pan-drug-resistant bacteria. PMID:28378786

  16. Deployable micro-traps to sequester motile bacteria.

    PubMed

    Di Giacomo, Raffaele; Krödel, Sebastian; Maresca, Bruno; Benzoni, Patrizia; Rusconi, Roberto; Stocker, Roman; Daraio, Chiara

    2017-04-05

    The development of strategies to reduce the load of unwanted bacteria is a fundamental challenge in industrial processing, environmental sciences and medical applications. Here, we report a new method to sequester motile bacteria from a liquid, based on passive, deployable micro-traps that confine bacteria using micro-funnels that open into trapping chambers. Even in low concentrations, micro-traps afford a 70% reduction in the amount of bacteria in a liquid sample, with a potential to reach >90% as shown by modelling improved geometries. This work introduces a new approach to contain the growth of bacteria without chemical means, an advantage of particular importance given the alarming growth of pan-drug-resistant bacteria.

  17. Carbon sequestration in surface flow constructed wetland after 12 years of swine wastewater treatment

    USDA-ARS?s Scientific Manuscript database

    Constructed wetlands used for the treatment of swine wastewater may potentially sequester significant amounts of carbon. In past studies, we evaluated the treatment efficiency of wastewater in marsh-pond-marsh design wetland system. The functionality of this system was highly dependent on soil carbo...

  18. [Effects of land use change on carbon storage in terrestrial ecosystem].

    PubMed

    Yang, Jingcheng; Han, Xingguo; Huang, Jianhui; Pan, Qingmin

    2003-08-01

    Terrestrial ecosystem is an important carbon pool, which plays a crucial role in carbon biogeochemical cycle. Human activities such as fossil fuel combustion and land use change have resulted in carbon fluxes from terrestrial ecosystem to the atmosphere, which increased the atmospheric CO2 concentration, and reinforced the greenhouse effect. Land use change affects the structure and function of the terrestrial ecosystem, which causes its change of carbon storage. To a great extent, the change of carbon storage lies in the type of ecosystem and the change of land use patterns. The conversion of forest to agricultural land and pasture causes a large reduction of carbon storage in vegetation and soil, and the decrease of soil carbon concentration is mainly caused by the reduction of detritus, the acceleration of soil organic matter decomposition, and the destroy of physical protection to organic matter due to agricultural practices. The loss of soil organic matter appears at the early stage after deforestation, and the loss rate is influenced by many factors and soil physical, chemical and biological processes. The conversion of agricultural land and pasture to forest and many conservative agricultural practices can sequester atmospheric carbon in vegetation and soil. Vegetation can sequester large amounts of carbon from atmosphere, while carbon accumulation in soil varies greatly because of farming history and soil spatial heterogeneity. Conservative agricultural practices such as no-tillage, reasonable cropping system, and fertilization can influence soil physical and chemical characters, plant growth, quality and quantity of stubble, and soil microbial biomass and its activity, and hence, maintain and increase soil carbon concentration.

  19. Agroforestry: a sustainable environmental practice for carbon sequestration under the climate change scenarios-a review.

    PubMed

    Abbas, Farhat; Hammad, Hafiz Mohkum; Fahad, Shah; Cerdà, Artemi; Rizwan, Muhammad; Farhad, Wajid; Ehsan, Sana; Bakhat, Hafiz Faiq

    2017-04-01

    Agroforestry is a sustainable land use system with a promising potential to sequester atmospheric carbon into soil. This system of land use distinguishes itself from the other systems, such as sole crop cultivation and afforestation on croplands only through its potential to sequester higher amounts of carbon (in the above- and belowground tree biomass) than the aforementioned two systems. According to Kyoto protocol, agroforestry is recognized as an afforestation activity that, in addition to sequestering carbon dioxide (CO 2 ) to soil, conserves biodiversity, protects cropland, works as a windbreak, and provides food and feed to human and livestock, pollen for honey bees, wood for fuel, and timber for shelters construction. Agroforestry is more attractive as a land use practice for the farming community worldwide instead of cropland and forestland management systems. This practice is a win-win situation for the farming community and for the environmental sustainability. This review presents agroforestry potential to counter the increasing concentration of atmospheric CO 2 by sequestering it in above- and belowground biomass. The role of agroforestry in climate change mitigation worldwide might be recognized to its full potential by overcoming various financial, technical, and institutional barriers. Carbon sequestration in soil by various agricultural systems can be simulated by various models but literature lacks reports on validated models to quantify the agroforestry potential for carbon sequestration.

  20. Enhancement of Terrestrial Carbon Sinks through the Reclamation of Abandoned Mined Lands

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gary Kronrad

    2004-10-31

    This project will determine the optimal forest management method to employ for each of the major commercial tree species so that profitability of timber production only or the combination of timber production and carbon sequestration is maximized. The goal of this project is to achieve DOE's long-term cost goal of sequestering carbon at $10 or less per ton. Because the potential of a forest ecosystem to sequester carbon depends on the species, site quality and management regimes utilized, this project will determine how to optimize carbon sequestration by determining how to optimally manage each species, given a range of sitemore » qualities and economic variables. This project also will determine the effects of a carbon credit market on the method and profitability of forest management, the cost of sequestering carbon, and the amount of carbon that can be sequestered. Information from this project will be used to produce user-friendly manuals which will contain economic and biological data for each of the species. These manuals will inform landowners and forest managers how to manage forests for timber and/or carbon credits, how to maximize financial returns, how much money can be earned, and how much carbon can be stored. Manuals will be disseminated through state and federal agricultural extension services and the forest service of each state, and will be published in forest landowner magazines.« less

  1. Enhancement of Terrestrial Carbon Sinks through the Reclamation of Abandoned Mined Lands

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gary Kronrad

    2006-01-31

    This project will determine the optimal forest management method to employ for each of the major commercial tree species so that profitability of timber production only or the combination of timber production and carbon sequestration is maximized. The goal of this project is to achieve DOE's long-term cost goal of sequestering carbon at $10 or less per ton. Because the potential of a forest ecosystem to sequester carbon depends on the species, site quality and management regimes utilized, this project will determine how to optimize carbon sequestration by determining how to optimally manage each species, given a range of sitemore » qualities and economic variables. This project also will determine the effects of a carbon credit market on the method and profitability of forest management, the cost of sequestering carbon, and the amount of carbon that can be sequestered. Information from this project will be used to produce user-friendly manuals which will contain economic and biological data for each of the species. These manuals will inform landowners and forest managers how to manage forests for timber and/or carbon credits, how to maximize financial returns, how much money can be earned, and how much carbon can be stored. Manuals will be disseminated through state and federal agricultural extension services and the forest service of each state, and will be published in forest landowner magazines.« less

  2. Enhancement of Terrestrial Carbon Sinks through the Reclamation of Abandoned Mined Lands

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gary Kronrad

    2005-04-30

    This project will determine the optimal forest management method to employ for each of the major commercial tree species so that profitability of timber production only or the combination of timber production and carbon sequestration is maximized. The goal of this project is to achieve DOE's long-term cost goal of sequestering carbon at $10 or less per ton. Because the potential of a forest ecosystem to sequester carbon depends on the species, site quality and management regimes utilized, this project will determine how to optimize carbon sequestration by determining how to optimally manage each species, given a range of sitemore » qualities and economic variables. This project also will determine the effects of a carbon credit market on the method and profitability of forest management, the cost of sequestering carbon, and the amount of carbon that can be sequestered. Information from this project will be used to produce user-friendly manuals which will contain economic and biological data for each of the species. These manuals will inform landowners and forest managers how to manage forests for timber and/or carbon credits, how to maximize financial returns, how much money can be earned, and how much carbon can be stored. Manuals will be disseminated through state and federal agricultural extension services and the forest service of each state, and will be published in forest landowner magazines.« less

  3. Enhancement of Terrestrial Carbon Sinks throught the Reclamation of Abandoned Mined Lands

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gary Kronrad

    2006-06-30

    This project will determine the optimal forest management method to employ for each of the major commercial tree species so that profitability of timber production only or the combination of timber production and carbon sequestration is maximized. The goal of this project is to achieve DOE's long-term cost goal of sequestering carbon at $10 or less per ton. Because the potential of a forest ecosystem to sequester carbon depends on the species, site quality and management regimes utilized, this project will determine how to optimize carbon sequestration by determining how to optimally manage each species, given a range of sitemore » qualities and economic variables. This project also will determine the effects of a carbon credit market on the method and profitability of forest management, the cost of sequestering carbon, and the amount of carbon that can be sequestered. Information from this project will be used to produce user-friendly manuals which will contain economic and biological data for each of the species. These manuals will inform landowners and forest managers how to manage forests for timber and/or carbon credits, how to maximize financial returns, how much money can be earned, and how much carbon can be stored. Manuals will be disseminated through state and federal agricultural extension services and the forest service of each state, and will be published in forest landowner magazines.« less

  4. Assessing the impact of changes in climate and CO2 on potential carbon sequestration in agricultural soils

    NASA Astrophysics Data System (ADS)

    Jain, Atul K.; West, Tristram O.; Yang, Xiaojuan; Post, Wilfred M.

    2005-10-01

    Changes in soil management can potentially increase the accumulation of soil organic carbon (SOC), thereby sequestering CO2 from the atmosphere. However, the amount of carbon sequestered in soils can be augmented or lessened due to changes in climate and atmospheric CO2 concentration. The purpose of this paper is to study the influence of climate and CO2 feedbacks on soil carbon sequestration using a terrestrial carbon cycle model. Model simulations consist of observed adoption rates of no-tillage practices on croplands in the U.S. and Canada between 1981-2000. Model results indicate potential sequestration rates between 0.4-0.6 MgC/ha/yr in the Midwestern U.S. with decreasing rates towards the western, dryer regions of the U.S. It is estimated here that changes in climate and CO2 between 1981-2000 could be responsible for an additional soil carbon sequestration of 42 Tg. This is 5% of the soil carbon estimated to be potentially sequestered as the result of conversion to no-tillage in the U.S. and Canada.

  5. Poor sequestration of toxic host plant cardenolides and their rapid loss in the milkweed butterfly Danaus chrysippus (Lepidoptera: Nymphalidae: Danainae: Danaini).

    PubMed

    Mebs, Dietrich; Wunder, Cora; Toennes, Stefan W

    2017-06-01

    Butterflies of the genus Danaus are known to sequester toxic cardenolides from milkweed host plants (Apocynaceae). In particular, Danaus plexippus efficiently sequesters and stores these compounds, whereas D. chrysippus, is considered to poorly sequester cardenolides. To estimate its sequestration capability compared with that of D. plexippus, larvae of both species were jointly reared on Asclepias curassavica and the major cardenolides of the host plant, calotropin and calactin, were analyzed in adults sampled at different time intervals after eclosion. Both cardenolides were detected in body and wings of D. plexippus. Whereas the calotropin-concentration remained constant over a period of 24 days, that of calactin steadily decreased. In the body, but not in the wings of D. chrysippus, calactin only was detected in low amounts, which was then almost completely lost during the following 8 days after eclosion, suggesting that in contrast to D. plexippus, cardenolides seem to be less important for that butterfly's defence against predators. Copyright © 2017 Elsevier Ltd. All rights reserved.

  6. Biodegradation of organic sulfur compounds in crude oils from Oman

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Koopmans, M.P.; Sinninghe Damste, J.S.; Leeuw, J.W. de

    1996-10-01

    Five closely related crude oils from Oman, showing various degrees of biodegradation ranging from non-biodegraded to severely biodegraded, were quantitatively investigated for free and sulfur-bound hydrocarbons. Hydrocarbons sequestered in the alkylsulfide fraction and the polar fraction were analysed after Raney Ni desulfurisation and subsequent hydrogenation. With increasing degree of biodegradation, pristane (Pr), phytane (Ph) and a series of mid-chain methyl alkanes are enriched relative to the n-alkanes, as evidenced by increased Pr/n-C{sub 17} and Ph/n-C{sub 18} ratios. In the severely biodegraded oil no free n-alkanes, mid-chain alkanes or isoprenoid alkanes could be detected. Sterane and hopane distributions, however, remain unchangedmore » throughout the biodegradation series. Hydrocarbons sequestered in the alkylsulfide fraction (i.e. n-alkanes, mid-chain methyl alkanes, Pr and Ph) are biodegraded at lower rates than the corresponding hydrocarbons in the saturated hydrocarbon fraction. Similar hydrocarbons sequestered in the polar fraction are biodegraded at even lower rates. These results suggest that hydrocarbons bound by a higher amount of sulfur links are biodegraded at a lower rate.« less

  7. The Geologic Nitrogen Cycle

    NASA Astrophysics Data System (ADS)

    Johnson, B. W.; Goldblatt, C.

    2013-12-01

    N2 is the dominant gas in Earth's atmosphere, and has been so through the majority of the planet's history. Originally thought to only be cycled in significant amounts through the biosphere, it is becoming increasingly clear that a large degree of geologic cycling can occur as well. N is present in crustal rocks at 10s to 100s of ppm and in the mantle at 1s to perhaps 10s of ppm. In light of new data, we present an Earth-system perspective of the modern N cycle, an updated N budget for the silicate Earth, and venture to explain the evolution of the N cycle over time. In an fashion similar to C, N has a fast, biologically mediated cycle and a slower cycle driven by plate tectonics. Bacteria fix N2 from the atmosphere into bioavailable forms. N is then cycled through the food chain, either by direct consumption of N-fixing bacteria, as NH4+ (the primary waste form), or NO3- (the most common inorganic species in the modern ocean). Some organic material settles as sediment on the ocean floor. In anoxic sediments, NH4+ dominates; due to similar ionic radii, it can readily substitute for K+ in mineral lattices, both in sedimentary rocks and in oceanic lithosphere. Once it enters a subduction zone, N may either be volatilized and returned to the atmosphere at arc volcanoes as N2 or N2O, sequestered into intrusive igneous rocks (as NH4+?), or subducted deep into the mantle, likely as NH4+. Mounting evidence indicates that a significant amount of N may be sequestered into the solid Earth, where it may remain for long periods (100s m.y.) before being returned to the atmosphere/biosphere by volcanism or weathering. The magnitude fluxes into the solid Earth and size of geologic N reservoirs are poorly constrained. The size of the N reservoirs contained in the solid Earth directly affects the evolution of Earth's atmosphere. It is possible that N now sequestered in the solid Earth was once in the atmosphere, which would have resulted in a higher atmospheric pressure, and therefore strengthened the greenhouse effect by pressure broadening the absorption of greenhouse gases. In addition,the behaviour of N is dependent on redox conditions in the ocean, which have not been constant over time.

  8. Bio-crude transcriptomics: Gene discovery and metabolic network reconstruction for the biosynthesis of the terpenome of the hydrocarbon oil-producing green alga, Botryococcus braunii race B (Showa)*

    DOE PAGES

    Molnár, István; Lopez, David; Wisecaver, Jennifer H.; ...

    2012-10-30

    Microalgae hold promise for yielding a biofuel feedstock that is sustainable, carbon-neutral, distributed, and only minimally disruptive for the production of food and feed by traditional agriculture. Amongst oleaginous eukaryotic algae, the B race of Botryococcus braunii is unique in that it produces large amounts of liquid hydrocarbons of terpenoid origin. These are comparable to fossil crude oil, and are sequestered outside the cells in a communal extracellular polymeric matrix material. The biosynthetic engineering of terpenoid bio-crude production requires identification of genes and reconstruction of metabolic pathways responsible for production of both hydrocarbons and other metabolites of the alga thatmore » compete for photosynthetic carbon and energy.« less

  9. Accumulation of reserve carbohydrate by rumen protozoa and bacteria in competition for glucose.

    PubMed

    Denton, Bethany L; Diese, Leanne E; Firkins, Jeffrey L; Hackmann, Timothy J

    2015-03-01

    The aim of this study was to determine if rumen protozoa could form large amounts of reserve carbohydrate compared to the amounts formed by bacteria when competing for glucose in batch cultures. We separated large protozoa and small bacteria from rumen fluid by filtration and centrifugation, recombined equal protein masses of each group into one mixture, and subsequently harvested (reseparated) these groups at intervals after glucose dosing. This method allowed us to monitor reserve carbohydrate accumulation of protozoa and bacteria individually. When mixtures were dosed with a moderate concentration of glucose (4.62 or 5 mM) (n = 2 each), protozoa accumulated large amounts of reserve carbohydrate; 58.7% (standard error of the mean [SEM], 2.2%) glucose carbon was recovered from protozoal reserve carbohydrate at time of peak reserve carbohydrate concentrations. Only 1.7% (SEM, 2.2%) was recovered in bacterial reserve carbohydrate, which was less than that for protozoa (P < 0.001). When provided a high concentration of glucose (20 mM) (n = 4 each), 24.1% (SEM, 2.2%) of glucose carbon was recovered from protozoal reserve carbohydrate, which was still higher (P = 0.001) than the 5.0% (SEM, 2.2%) glucose carbon recovered from bacterial reserve carbohydrate. Our novel competition experiments directly demonstrate that mixed protozoa can sequester sugar away from bacteria by accumulating reserve carbohydrate, giving protozoa a competitive advantage and stabilizing fermentation in the rumen. Similar experiments could be used to investigate the importance of starch sequestration. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

  10. Carbon and nitrogen pools in oak-hickory forests of varying productivity

    Treesearch

    Donald J. Kaczmarek; Karyn S. Rodkey; Robert T. Reber; Phillip E. Pope; Felix, Jr. Ponder

    1995-01-01

    Carbon (C) and nitrogen (N) storage capacities are critical issues facing forest ecosystem management in the face of potential global climate change. The amount of C sequestered by forest ecosystems can be a significant sink for increasing atmospheric CO2 levels. N availability can interact with other environmental factors such as water...

  11. A model for estimating windbreak carbon within COMET-Farm™

    Treesearch

    Justin ​Ziegler; Mark Easter; Amy Swan; James Brandle; William Ballesteros; Grant Domke; Adam Chambers; Marlen Eve; Keith Paustian

    2016-01-01

    Agroforestry as a land management practice presents a method for partially offsetting greenhouse gas emissions from agricultural land. Of all agroforestry practices in the United States, windbreaks in particular are used throughout the United States providing a useful starting point for deriving a modelling systemwhich could quantify the amount of carbon sequestered on...

  12. Sea-level-induced seismicity and submarine landslide occurrence

    USGS Publications Warehouse

    Brothers, Daniel S.; Luttrell, Karen M.; Chaytor, Jason D.

    2013-01-01

    The temporal coincidence between rapid late Pleistocene sea-level rise and large-scale slope failures is widely documented. Nevertheless, the physical mechanisms that link these phenomena are poorly understood, particularly along nonglaciated margins. Here we investigate the causal relationships between rapid sea-level rise, flexural stress loading, and increased seismicity rates along passive margins. We find that Coulomb failure stress across fault systems of passive continental margins may have increased more than 1 MPa during rapid late Pleistocene–early Holocene sea-level rise, an amount sufficient to trigger fault reactivation and rupture. These results suggest that sea-level–modulated seismicity may have contributed to a number of poorly understood but widely observed phenomena, including (1) increased frequency of large-scale submarine landslides during rapid, late Pleistocene sea-level rise; (2) emplacement of coarse-grained mass transport deposits on deep-sea fans during the early stages of marine transgression; and (3) the unroofing and release of methane gas sequestered in continental slope sediments.

  13. Organic carbon stocks and sequestration rates of forest soils in Germany.

    PubMed

    Grüneberg, Erik; Ziche, Daniel; Wellbrock, Nicole

    2014-08-01

    The National Forest Soil Inventory (NFSI) provides the Greenhouse Gas Reporting in Germany with a quantitative assessment of organic carbon (C) stocks and changes in forest soils. Carbon stocks of the organic layer and the mineral topsoil (30 cm) were estimated on the basis of ca. 1.800 plots sampled from 1987 to 1992 and resampled from 2006 to 2008 on a nationwide grid of 8 × 8 km. Organic layer C stock estimates were attributed to surveyed forest stands and CORINE land cover data. Mineral soil C stock estimates were linked with the distribution of dominant soil types according to the Soil Map of Germany (1 : 1 000 000) and subsequently related to the forest area. It appears that the C pool of the organic layer was largely depending on tree species and parent material, whereas the C pool of the mineral soil varied among soil groups. We identified the organic layer C pool as stable although C was significantly sequestered under coniferous forest at lowland sites. The mineral soils, however, sequestered 0.41 Mg C ha(-1) yr(-1) . Carbon pool changes were supposed to depend on stand age and forest transformation as well as an enhanced biomass input. Carbon stock changes were clearly attributed to parent material and soil groups as sandy soils sequestered higher amounts of C, whereas clayey and calcareous soils showed small gains and in some cases even losses of soil C. We further showed that the largest part of the overall sample variance was not explained by fine-earth stock variances, rather by the C concentrations variance. The applied uncertainty analyses in this study link the variability of strata with measurement errors. In accordance to other studies for Central Europe, the results showed that the applied method enabled a reliable nationwide quantification of the soil C pool development for a certain period. © 2014 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.

  14. Organic carbon stocks and sequestration rates of forest soils in Germany

    PubMed Central

    Grüneberg, Erik; Ziche, Daniel; Wellbrock, Nicole

    2014-01-01

    The National Forest Soil Inventory (NFSI) provides the Greenhouse Gas Reporting in Germany with a quantitative assessment of organic carbon (C) stocks and changes in forest soils. Carbon stocks of the organic layer and the mineral topsoil (30 cm) were estimated on the basis of ca. 1.800 plots sampled from 1987 to 1992 and resampled from 2006 to 2008 on a nationwide grid of 8 × 8 km. Organic layer C stock estimates were attributed to surveyed forest stands and CORINE land cover data. Mineral soil C stock estimates were linked with the distribution of dominant soil types according to the Soil Map of Germany (1 : 1 000 000) and subsequently related to the forest area. It appears that the C pool of the organic layer was largely depending on tree species and parent material, whereas the C pool of the mineral soil varied among soil groups. We identified the organic layer C pool as stable although C was significantly sequestered under coniferous forest at lowland sites. The mineral soils, however, sequestered 0.41 Mg C ha−1 yr−1. Carbon pool changes were supposed to depend on stand age and forest transformation as well as an enhanced biomass input. Carbon stock changes were clearly attributed to parent material and soil groups as sandy soils sequestered higher amounts of C, whereas clayey and calcareous soils showed small gains and in some cases even losses of soil C. We further showed that the largest part of the overall sample variance was not explained by fine-earth stock variances, rather by the C concentrations variance. The applied uncertainty analyses in this study link the variability of strata with measurement errors. In accordance to other studies for Central Europe, the results showed that the applied method enabled a reliable nationwide quantification of the soil C pool development for a certain period. PMID:24616061

  15. Modeling landscape net ecosystem productivity (LandNEP) under alternative management regimes

    Treesearch

    Eugenie S. Euskirchen; Jiquan Chen; Harbin Li; Eric J. Gustafson; Thomas R. Crow

    2002-01-01

    Forests have been considered as a major carbon sink within the global carbon budget. However, a fragmented forest landscape varies significantly in its composition and age structure, and the amount of carbon sequestered at this level remains generally unknown to the scientific community. More precisely, the temporal dynamics and spatial distribution of net ecosystem...

  16. Stabilization and destabilization of soil organic matter--a new focus

    Treesearch

    Phillip Sollins; Chris Swanston; Marc Kramer

    2007-01-01

    Interest in soil organic matter (SOM) is ramping up as concern mounts about steadily increasing levels of atmospheric CO2. There are two reasons for this. First, there is hope that improvements in crop, forest, and soil management may allow significant amounts of CO2 to be removed from the atmosphere and sequestered in soil...

  17. Negative Emissions Technology

    NASA Astrophysics Data System (ADS)

    Day, Danny

    2006-04-01

    Although `negative emissions' of carbon dioxide need not, in principle, involve use of biological processes to draw carbon out of the atmosphere, such `agricultural' sequestration' is the only known way to remove carbon from the atmosphere on time scales comparable to the time scale for anthropogenic increases in carbon emissions. In order to maintain the `negative emissions' the biomass must be used in such a way that the resulting carbon dioxide is separated and permanently sequestered. Two options for sequestration are in the topsoil and via geologic carbon sequestration. The former has multiple benefits, but the latter also is needed. Thus, although geologic carbon sequestration is viewed skeptically by some environmentalists as simply a way to keep using fossil fuels---it may be a key part of reversing accelerating climate forcing if rapid climate change is beginning to occur. I will first review the general approach of agricultural sequestration combined with use of resulting biofuels in a way that permits carbon separation and then geologic sequestration as a negative emissions technology. Then I discuss the process that is the focus of my company---the EPRIDA cycle. If deployed at a sufficiently large scale, it could reverse the increase in CO2 concentrations. I also estimate of benefits --carbon and other---of large scale deployment of negative emissions technologies. For example, using the EPRIDA cycle by planting and soil sequestering carbon in an area abut In 3X the size of Texas would remove the amount of carbon that is being accumulated worldwide each year. In addition to the atmospheric carbon removal, the EPRIDA approach also counters the depletion of carbon in the soil---increasing topsoil and its fertility; reduces the excess nitrogen in the water by eliminating the need for ammonium nitrate fertilizer and reduces fossil fuel reliance by providing biofuel and avoiding natural gas based fertilizer production.

  18. Silicone wristbands as personal passive samplers.

    PubMed

    O'Connell, Steven G; Kincl, Laurel D; Anderson, Kim A

    2014-03-18

    Active-sampling approaches are commonly used for personal monitoring, but are limited by energy usage and data that may not represent an individual's exposure or bioavailable concentrations. Current passive techniques often involve extensive preparation, or are developed for only a small number of targeted compounds. In this work, we present a novel application for measuring bioavailable exposure with silicone wristbands as personal passive samplers. Laboratory methodology affecting precleaning, infusion, and extraction were developed from commercially available silicone, and chromatographic background interference was reduced after solvent cleanup with good extraction efficiency (>96%). After finalizing laboratory methods, 49 compounds were sequestered during an ambient deployment which encompassed a diverse set of compounds including polycyclic aromatic hydrocarbons (PAHs), consumer products, personal care products, pesticides, phthalates, and other industrial compounds ranging in log K(ow) from -0.07 (caffeine) to 9.49 (tris(2-ethylhexyl) phosphate). In two hot asphalt occupational settings, silicone personal samplers sequestered 25 PAHs during 8- and 40-h exposures, as well as 2 oxygenated-PAHs (benzofluorenone and fluorenone) suggesting temporal sensitivity over a single work day or week (p < 0.05, power =0.85). Additionally, the amount of PAH sequestered differed between worksites (p < 0.05, power = 0.99), suggesting spatial sensitivity using this novel application.

  19. Economic Analysis of Planting Forests on Rice Lands in Texas: Sequestering Carbon and Avoiding Methane Production

    NASA Astrophysics Data System (ADS)

    Kronrad, G. D.; Huang, C.

    2005-12-01

    Global climate change is predicted due to increases in greenhouse gasses (i.e. CO2, CH4, CFCs, N2O, O3) in the atmosphere caused by human activities. The atmospheric concentration of methane (CH4), which absorbs and retains heat 21 times more effectively than CO2, has increased. Anaerobic bacterial activity in rice paddies constitutes one of major emission sources of CH4. The rice fields of Texas, for example, accounted for an annual CH4 emission of between 1.1 and 1.6 million tons of CO2 equivalent between 1990 and 2000. Converting marginal rice fields to forests plantations will remove CO2 from the atmosphere, sequester carbon in the forests and prevent the production of CH4. Therefore, carbon credits can be claimed for the carbon sequestered and the avoidance of CH4 production. Analyses were conducted to calculate the amount of carbon sequestered and methane avoided, and the profitability, measured in net present worth (NPW), of managing loblolly pine plantation for 1) timber production only, 2) the dual products of timber products and carbon credits in forests planted on marginal agricultural and unused pastureland and 3) the dual products of timber and carbon storage in forests planted on marginal rice lands. Calculations were performed using three discount rates, three site qualities and five prices for carbon credits. The results indicate that on average quality land, using a discount rate of 8 percent, forests planted on marginal agricultural and unused pastureland earn a NPW of 346 per acre from timber production only; a NPW of 438 per acre from timber and carbon credits (54.4 tons of carbon sequestered), assuming carbon is worth 10 per ton, during one rotation (32 years). The profitability of forest management increases due to the inclusion of carbon credits. The profitability of planting forests on marginal rice fields is even higher, earning a NPW of 566 per acre from timber and carbon credits (54.4 tons of C sequestered and 33.3 tons of C emission avoided).

  20. Ocean sequestration of crop residue carbon: recycling fossil fuel carbon back to deep sediments.

    PubMed

    Strand, Stuart E; Benford, Gregory

    2009-02-15

    For significant impact any method to remove CO2 from the atmosphere must process large amounts of carbon efficiently, be repeatable, sequester carbon for thousands of years, be practical, economical and be implemented soon. The only method that meets these criteria is removal of crop residues and burial in the deep ocean. We show here that this method is 92% efficient in sequestration of crop residue carbon while cellulosic ethanol production is only 32% and soil sequestration is about 14% efficient. Deep ocean sequestration can potentially capture 15% of the current global CO2 annual increase, returning that carbon backto deep sediments, confining the carbon for millennia, while using existing capital infrastructure and technology. Because of these clear advantages, we recommend enhanced research into permanent sequestration of crop residues in the deep ocean.

  1. Effects of urban tree management and species selection on atmospheric carbon dioxide

    Treesearch

    David J. Nowak; Jack C. Stevens; Susan M. Sisinni; Christopher J. Luley

    2002-01-01

    Trees sequester and store carbon in their tissue at differing rates and amounts based on such factors as tree size at maturity, life span, and growth rate. Concurrently, tree care practices release carbon back to the atmosphere based on fossil-fuel emissions from maintenance equipment (e.g., chain saws, trucks, chippers). Management choices such as tree locations for...

  2. We're all in this together: decisionmaking to address climate change in a complex world

    Treesearch

    Jonathan Thompson; Ralph Alig

    2009-01-01

    Forests significantly influence the global carbon budget: they store massive amounts of carbon in their wood and soil, they sequester atmospheric carbon as they grow, and they emit carbon as a greenhouse gas when harvested or converted to another use. These factors make forest conservation and management important components of most strategies for adapting to and...

  3. NMR and mass spectrometry of phosphorus in wetlands

    USGS Publications Warehouse

    El-Rifai, H.; Heerboth, M.; Gedris, T.E.; Newman, S.; Orem, W.; Cooper, W.T.

    2008-01-01

    There is at present little information on the long-term stability of phosphorus sequestered in wetlands. Phosphorus sequestered during high loading periods may be relatively unstable and easily remobilized following changes in nutrient status or hydrological regime, but the chemical forms of sequestered phosphorus that do remobilize are largely unknown at this time. A lack of suitable analytical techniques has contributed to this dearth of knowledge regarding the stability of soil organic phosphorus. We analysed phosphorus in soils from the 'head' of Rescue Strand tree island and an adjacent marsh in the Florida Everglades by 31P nuclear magnetic resonance (NMR) spectroscopy and high-resolution mass spectrometry. Tree islands are important areas of biodiversity within the Everglades and offer a unique opportunity to study phosphorus sequestration because they are exposed to large phosphorus loads and appear to be natural nutrient sinks. The 31P NMR profiling of extracts from surface and sediment samples in the tree island indicates that phosphorus input to Rescue Strand tree island soils is mostly in the form of inorganic ortho-phosphate and is either refractory when deposited or rapidly recycled by the native vegetation into a stable phosphorus pool largely resistant to re-utilization by plants or microbes. Mass spectrometry revealed the presence of inositol hexakisphosphate, a common organic monophosphate ester not previously observed in Everglades' soils. ?? 2008 The Authors.

  4. Key role of symbiotic dinitrogen fixation in tropical forest secondary succession

    NASA Astrophysics Data System (ADS)

    Batterman, Sarah A.; Hedin, Lars O.; van Breugel, Michiel; Ransijn, Johannes; Craven, Dylan J.; Hall, Jefferson S.

    2013-10-01

    Forests contribute a significant portion of the land carbon sink, but their ability to sequester CO2 may be constrained by nitrogen, a major plant-limiting nutrient. Many tropical forests possess tree species capable of fixing atmospheric dinitrogen (N2), but it is unclear whether this functional group can supply the nitrogen needed as forests recover from disturbance or previous land use, or expand in response to rising CO2 (refs 6, 8). Here we identify a powerful feedback mechanism in which N2 fixation can overcome ecosystem-scale deficiencies in nitrogen that emerge during periods of rapid biomass accumulation in tropical forests. Over a 300-year chronosequence in Panama, N2-fixing tree species accumulated carbon up to nine times faster per individual than their non-fixing neighbours (greatest difference in youngest forests), and showed species-specific differences in the amount and timing of fixation. As a result of fast growth and high fixation, fixers provided a large fraction of the nitrogen needed to support net forest growth (50,000kg carbon per hectare) in the first 12years. A key element of ecosystem functional diversity was ensured by the presence of different N2-fixing tree species across the entire forest age sequence. These findings show that symbiotic N2 fixation can have a central role in nitrogen cycling during tropical forest stand development, with potentially important implications for the ability of tropical forests to sequester CO2.

  5. Key role of symbiotic dinitrogen fixation in tropical forest secondary succession.

    PubMed

    Batterman, Sarah A; Hedin, Lars O; van Breugel, Michiel; Ransijn, Johannes; Craven, Dylan J; Hall, Jefferson S

    2013-10-10

    Forests contribute a significant portion of the land carbon sink, but their ability to sequester CO2 may be constrained by nitrogen, a major plant-limiting nutrient. Many tropical forests possess tree species capable of fixing atmospheric dinitrogen (N2), but it is unclear whether this functional group can supply the nitrogen needed as forests recover from disturbance or previous land use, or expand in response to rising CO2 (refs 6, 8). Here we identify a powerful feedback mechanism in which N2 fixation can overcome ecosystem-scale deficiencies in nitrogen that emerge during periods of rapid biomass accumulation in tropical forests. Over a 300-year chronosequence in Panama, N2-fixing tree species accumulated carbon up to nine times faster per individual than their non-fixing neighbours (greatest difference in youngest forests), and showed species-specific differences in the amount and timing of fixation. As a result of fast growth and high fixation, fixers provided a large fraction of the nitrogen needed to support net forest growth (50,000 kg carbon per hectare) in the first 12 years. A key element of ecosystem functional diversity was ensured by the presence of different N2-fixing tree species across the entire forest age sequence. These findings show that symbiotic N2 fixation can have a central role in nitrogen cycling during tropical forest stand development, with potentially important implications for the ability of tropical forests to sequester CO2.

  6. Organic textile waste as a resource for sustainable agriculture in arid and semi-arid areas.

    PubMed

    Eriksson, Bo G

    2017-03-01

    New vegetation in barren areas offers possibilities for sequestering carbon in the soil. Arid and semi-arid areas (ASAs) are candidates for new vegetation. The possibility of agriculture in ASAs is reviewed, revealing the potential for cultivation by covering the surface with a layer of organic fibres. This layer collects more water from humidity in the air than does the uncovered mineral surface, and creates a humid environment that promotes microbial life. One possibility is to use large amounts of organic fibres for soil enhancement in ASAs. In the context of the European Commission Waste Framework Directive, the possibility of using textile waste from Sweden is explored. The costs for using Swedish textile waste are high, but possible gains are the sale of agricultural products and increased land prices as well as environmental mitigation. The findings suggest that field research on such agriculture in ASAs should start as soon as possible.

  7. Diatom aggregation and dimethylsulfide production in phytoplankton blooms

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Crocker, K.M.

    1994-01-01

    Phytoplankton blooms are crucial links in many of the earth's biogeochemical cycles. Blooms take up atmospheric carbon through photosynthesis, and sequester it on the ocean floor by sinking. Aggregation of single cells into [open quote]marine snow[close quote] particles speeds up the sinking of algal cells. Laboratory studies investigating the process of aggregation show that some species have a higher probability of aggregating than others, and that there exist several mechanisms for causing aggregation. Field studies confirm that some species are more likely to be found in aggregates than in the surrounding seawater. High latitude Premnesiophyte blooms are found to producemore » large amounts of dimethylsulflde (DMS), believed to be an important chemical in global thermoregulation. DMS is found to vary diurnally, possibly due to photooxidation by ultraviolet light. This possibility links the effects of DMS on cloud formation with the effects of increased ultraviolet light penetrating the earths ozone layer.« less

  8. Is climate change mitigation the best use of desert shrublands?

    Treesearch

    Susan E. Meyer

    2011-01-01

    In a world where the metrics of the carbon economy have become a major issue, it may come as a surprise that intact cold desert shrublands can sequester significant amounts of carbon, both as biomass and in the form of SOC (soil organic carbon). Xerophytic shrubs invest heavily in belowground biomass, placing fixed carbon in an environment where it turns over only very...

  9. Characterizing variable biogeochemical changes during the treatment of produced oilfield waste.

    PubMed

    Hildenbrand, Zacariah L; Santos, Inês C; Liden, Tiffany; Carlton, Doug D; Varona-Torres, Emmanuel; Martin, Misty S; Reyes, Michelle L; Mulla, Safwan R; Schug, Kevin A

    2018-09-01

    At the forefront of the discussions about climate change and energy independence has been the process of hydraulic fracturing, which utilizes large amounts of water, proppants, and chemical additives to stimulate sequestered hydrocarbons from impermeable subsurface strata. This process also produces large amounts of heterogeneous flowback and formation waters, the subsurface disposal of which has most recently been linked to the induction of anthropogenic earthquakes. As such, the management of these waste streams has provided a newfound impetus to explore recycling alternatives to reduce the reliance on subsurface disposal and fresh water resources. However, the biogeochemical characteristics of produced oilfield waste render its recycling and reutilization for production well stimulation a substantial challenge. Here we present a comprehensive analysis of produced waste from the Eagle Ford shale region before, during, and after treatment through adjustable separation, flocculation, and disinfection technologies. The collection of bulk measurements revealed significant reductions in suspended and dissolved constituents that could otherwise preclude untreated produced water from being utilized for production well stimulation. Additionally, a significant step-wise reduction in pertinent scaling and well-fouling elements was observed, in conjunction with notable fluctuations in the microbiomes of highly variable produced waters. Collectively, these data provide insight into the efficacies of available water treatment modalities within the shale energy sector, which is currently challenged with improving the environmental stewardship of produced water management. Copyright © 2018 Elsevier B.V. All rights reserved.

  10. Mineral-bearing vesicle transport in sea urchin embryos.

    PubMed

    Vidavsky, Netta; Masic, Admir; Schertel, Andreas; Weiner, Steve; Addadi, Lia

    2015-12-01

    Sea urchin embryos sequester calcium from the sea water. This calcium is deposited in a concentrated form in granule bearing vesicles both in the epithelium and in mesenchymal cells. Here we use in vivo calcein labeling and confocal Raman spectroscopy, as well as cryo-FIB-SEM 3D structural reconstructions, to investigate the processes occurring in the internal cavity of the embryo, the blastocoel. We demonstrate that calcein stained granules are also present in the filopodial network within the blastocoel. Simultaneous fluorescence imaging and Raman spectroscopy show that these granules do contain a calcium mineral. By tracking the movements of these granules, we show that the granules in the epithelium and primary mesenchymal cells barely move, but those in the filopodial network move long distances. We could however not detect any unidirectional movement of the filopodial granules. We also show the presence of mineral containing multivesicular vesicles that also move in the filopodial network. We conclude that the filopodial network is an integral part of the mineral transport process, and possibly also for sequestering calcium and other ions. Although much of the sequestered calcium is deposited in the mineralized skeleton, a significant amount is used for other purposes, and this may be temporarily stored in these membrane-delineated intracellular deposits. Copyright © 2015 Elsevier Inc. All rights reserved.

  11. Silicone Wristbands as Personal Passive Samplers

    PubMed Central

    2014-01-01

    Active-sampling approaches are commonly used for personal monitoring, but are limited by energy usage and data that may not represent an individual’s exposure or bioavailable concentrations. Current passive techniques often involve extensive preparation, or are developed for only a small number of targeted compounds. In this work, we present a novel application for measuring bioavailable exposure with silicone wristbands as personal passive samplers. Laboratory methodology affecting precleaning, infusion, and extraction were developed from commercially available silicone, and chromatographic background interference was reduced after solvent cleanup with good extraction efficiency (>96%). After finalizing laboratory methods, 49 compounds were sequestered during an ambient deployment which encompassed a diverse set of compounds including polycyclic aromatic hydrocarbons (PAHs), consumer products, personal care products, pesticides, phthalates, and other industrial compounds ranging in log Kow from −0.07 (caffeine) to 9.49 (tris(2-ethylhexyl) phosphate). In two hot asphalt occupational settings, silicone personal samplers sequestered 25 PAHs during 8- and 40-h exposures, as well as 2 oxygenated-PAHs (benzofluorenone and fluorenone) suggesting temporal sensitivity over a single work day or week (p < 0.05, power =0.85). Additionally, the amount of PAH sequestered differed between worksites (p < 0.05, power = 0.99), suggesting spatial sensitivity using this novel application. PMID:24548134

  12. Analysis of Geologic Parameters on the Performance of CO2-Plume Geothermal (CPG) Systems in a Multi-Layered Reservoirs

    NASA Astrophysics Data System (ADS)

    Garapati, N.; Randolph, J.; Saar, M. O.

    2013-12-01

    CO2-Plume Geothermal (CPG) involves injection of CO2 as a working fluid to extract heat from naturally high permeable sedimentary basins. The injected CO2 forms a large subsurface CO2 plume that absorbs heat from the geothermal reservoir and eventually buoyantly rises to the surface. The heat density of sedimentary basins is typically relatively low.However, this drawback is likely counteracted by the large accessible volume of natural reservoirs compared to artificial, hydrofractured, and thus small-scale, reservoirs. Furthermore, supercritical CO2has a large mobility (inverse kinematic viscosity) and expansibility compared to water resulting in the formation of a strong thermosiphon which eliminates the need for parasitic pumping power requirements and significantly increasing electricity production efficiency. Simultaneously, the life span of the geothermal power plant can be increased by operating the CPG system such that it depletes the geothermal reservoir heat slowly. Because the produced CO2 is reinjected into the ground with the main CO2 sequestration stream coming from a CO2 emitter, all of the CO2 is ultimately geologically sequestered resulting in a CO2 sequestering geothermal power plant with a negative carbon footprint. Conventional geothermal process requires pumping of huge amount of water for the propagation of the fractures in the reservoir, but CPG process eliminates this requirement and conserves water resources. Here, we present results for performance of a CPG system as a function of various geologic properties of multilayered systemsincludingpermeability anisotropy, rock thermal conductivity, geothermal gradient, reservoir depth and initial native brine salinity as well as spacing between the injection and production wells. The model consists of a 50 m thick, radially symmetric grid with a semi-analytic heat exchange and no fluid flow at the top and bottom boundaries and no fluid and heat flow at the lateral boundaries. We design Plackett-Burman experiments resulting in 16 simulations for the seven parameters investigated. The reservoir is divided into 3-, 4-, or 5- layer systems with log-normal permeability distributions. We consider 10 sets of values for each case resulting in a total of 16x3x10 =480 simulations.We analyze the performance of the system to maximize the amount of heat energy extracted, minimize reservoir temperature depletion and maximize the CO2concentration in the produced fluid. Achieving the latter objective reduces power system problems as Welch and Boyle (GRC Trans. 2009) found that CO2 concentration should be >94% in the systems they investigated.

  13. Carbon sequestration in a surface flow constructed wetland after 12 years of swine wastewater treatment.

    PubMed

    Reddy, Gudigopuram B; Raczkowski, Charles W; Cyrus, Johnsely S; Szogi, Ariel

    2016-01-01

    Constructed wetlands used for the treatment of swine wastewater may potentially sequester significant amounts of carbon. In past studies, we evaluated the treatment efficiency of wastewater in a marsh-pond-marsh design wetland system. The functionality of this system was highly dependent on soil carbon content and organic matter turnover rate. To better understand system performance and carbon dynamics, we measured plant dry matter, decomposition rates and soil carbon fractions. Plant litter decomposition rate was 0.0052 g day(-1) (±0.00119 g day(-1)) with an estimated half-life of 133 days. The detritus layer accumulated over the soil surface had much more humin than other C fractions. In marsh areas, soil C extracted with NaOH had four to six times higher amounts of humic acid, fulvic acid and humin than soil C extracted by cold and hot water, HCl/HF, and Na pyruvate. In the pond area, humic acid, fulvic acid and humin content were two to four times lower than in the marsh area. More soil C and N was found in the marsh area than in the pond area. These wetlands proved to be large sinks for stable C forms.

  14. Long-term simulations of forest management impacts on carbon storage from loblolly pine plantations in the Southern U.S.

    Treesearch

    Huei-Jin Wang; Philip J. Radtke; Stephen P. Prisley

    2012-01-01

    Accounting for forest components in carbon accounting systems may be insufficient when substantial amounts of sequestered carbon are harvested and converted to wood products in use and in landfill. The potential of forest offset – in-woods aboveground carbon storage, carbon stored in harvested wood, and energy offset by burning harvested wood – from loblolly pine...

  15. Carbon sequestration via reaction with basaltic rocks: geochemical modeling and experimental results

    USGS Publications Warehouse

    Rosenbauer, Robert J.; Thomas, Burt; Bischoff, James L.; Palandri, James

    2012-01-01

    Basaltic rocks are potential repositories for sequestering carbon dioxide (CO2) because of their capacity for trapping CO2 in carbonate minerals. We carried out a series of thermodynamic equilibrium models and high pressure experiments, reacting basalt with CO2-charged fluids over a range of conditions from 50 to 200 °C at 300 bar. Results indicate basalt has a high reactivity to CO2 acidified brine. Carbon dioxide is taken up from solution at all temperatures from 50 to 200 °C, 300 bar, but the maximum extent and rate of reaction occurs at 100 °C, 300 bar. Reaction path simulations utilizing the geochemical modeling program CHILLER predicted an equilibrium carbonate alteration assemblage of calcite, magnesite, and siderite, but the only secondary carbonate identified in the experiments was a ferroan magnesite. The amount of uptake at 100 °C, 300 bar ranged from 8% by weight for a typical tholeite to 26% for a picrite. The actual amount of CO2 uptake and extent of rock alteration coincides directly with the magnesium content of the rock suggesting that overall reaction extent is controlled by bulk basalt Mg content. In terms of sequestering CO2, an average basaltic MgO content of 8% is equivalent to 2.6 × 108 metric ton CO2/km3 basalt.

  16. Sequestering the standard model vacuum energy.

    PubMed

    Kaloper, Nemanja; Padilla, Antonio

    2014-03-07

    We propose a very simple reformulation of general relativity, which completely sequesters from gravity all of the vacuum energy from a matter sector, including all loop corrections and renders all contributions from phase transitions automatically small. The idea is to make the dimensional parameters in the matter sector functionals of the 4-volume element of the Universe. For them to be nonzero, the Universe should be finite in spacetime. If this matter is the standard model of particle physics, our mechanism prevents any of its vacuum energy, classical or quantum, from sourcing the curvature of the Universe. The mechanism is consistent with the large hierarchy between the Planck scale, electroweak scale, and curvature scale, and early Universe cosmology, including inflation. Consequences of our proposal are that the vacuum curvature of an old and large universe is not zero, but very small, that w(DE) ≃ -1 is a transient, and that the Universe will collapse in the future.

  17. Impacts of crop rotations on soil organic carbon sequestration

    NASA Astrophysics Data System (ADS)

    Gobin, Anne; Vos, Johan; Joris, Ingeborg; Van De Vreken, Philippe

    2013-04-01

    Agricultural land use and crop rotations can greatly affect the amount of carbon sequestered in the soil. We developed a framework for modelling the impacts of crop rotations on soil carbon sequestration at the field scale with test case Flanders. A crop rotation geo-database was constructed covering 10 years of crop rotation in Flanders using the IACS parcel registration (Integrated Administration and Control System) to elicit the most common crop rotation on major soil types in Flanders. In order to simulate the impact of crop cover on carbon sequestration, the Roth-C model was adapted to Flanders' environment and coupled to common crop rotations extracted from the IACS geodatabases and statistical databases on crop yield. Crop allometric models were used to calculate crop residues from common crops in Flanders and subsequently derive stable organic matter fluxes to the soil (REGSOM). The REGSOM model was coupled to Roth-C model was run for 30 years and for all combinations of seven main arable crops, two common catch crops and two common dosages of organic manure. The common crops are winter wheat, winter barley, sugar beet, potato, grain maize, silage maize and winter rapeseed; the catch crops are yellow mustard and Italian ryegrass; the manure dosages are 35 ton/ha cattle slurry and 22 ton/ha pig slurry. Four common soils were simulated: sand, loam, sandy loam and clay. In total more than 2.4 million simulations were made with monthly output of carbon content for 30 years. Results demonstrate that crop cover dynamics influence carbon sequestration for a very large percentage. For the same rotations carbon sequestration is highest on clay soils and lowest on sandy soils. Crop residues of grain maize and winter wheat followed by catch crops contribute largely to the total carbon sequestered. This implies that agricultural policies that impact on agricultural land management influence soil carbon sequestration for a large percentage. The framework is therefore suited for further scenario analysis and impact assessment in order to support agri-environmental policy decisions.

  18. Atmospheric feedbacks in North Africa from an irrigated, afforested Sahara

    NASA Astrophysics Data System (ADS)

    Kemena, Tronje Peer; Matthes, Katja; Martin, Thomas; Wahl, Sebastian; Oschlies, Andreas

    2017-09-01

    Afforestation of the Sahara has been proposed as a climate engineering method to sequester a substantial amount of carbon dioxide, potentially effective to mitigate climate change. Earlier studies predicted changes in the atmospheric circulation system. These atmospheric feedbacks raise questions about the self-sustainability of such an intervention, but have not been investigated in detail. Here, we investigate changes in precipitation and circulation in response to Saharan large-scale afforestation and irrigation with NCAR's CESM-WACCM Earth system model. Our model results show a Saharan temperature reduction by 6 K and weak precipitation enhancement by 267 mm/year over the Sahara. Only 26% of the evapotranspirated water re-precipitates over the Saharan Desert, considerably large amounts are advected southward to the Sahel zone and enhance the West African monsoon (WAM). Different processes cause circulation and precipitation changes over North Africa. The increase in atmospheric moisture leads to radiative cooling above the Sahara and increased high-level cloud coverage as well as atmospheric warming above the Sahel zone. Both lead to a circulation anomaly with descending air over the Sahara and ascending air over the Sahel zone. Together with changes in the meridional temperature gradient, this results in a southward shift of the inner-tropical front. The strengthening of the Tropical easterly jet and the northward displacement of the African easterly jet is associated with a northward displacement and strengthening of the WAM precipitation. Our results suggest complex atmospheric circulation feedbacks, which reduce the precipitation potential over an afforested Sahara and enhance WAM precipitation.

  19. Population assessment and potential functional roles of native mussels in the Upper Mississippi River

    USGS Publications Warehouse

    Newton, Teresa J.; Zigler, Steven J.; Rogala, James T.; Gray, Brian R.; Davis, Mike

    2011-01-01

    1. Despite a heightened global concern for native mussels, fundamental research on mussel ecology in large rivers is lacking. These gaps in knowledge about where mussels occur, and why, are limiting habitat restoration activities. 2. Large-scale systematic surveys for native mussels in three reaches of the Upper Mississippi River documented mussel communities composed of 16–23 species and ranging from 2.9–4.5 live mussels m-2 that were actively recruiting new cohorts into their populations (87–100% of the species were found as juveniles 5 years old). Estimates of mean tissue biomass and production in these reaches ranged from 2.1–3.1 g C m-2 and 0.4–0.6 g C m-2year-1, respectively. 3. Mussels filtered a significant amount of water (range, 0.05–0.07 m3m-2d-1) over a 480 km reach of the Upper Mississippi River — amounting to a filtration rate of 53.1 million m3day-1. The filtration rate of mussels as a percentage of river discharge ranged from 0.5–1.4% at high flows (5% exceedance), from 1.5–4.4% at moderate flows (50% exceedance) and from 4.4–12.2% during low flows (95% exceedance). 4. Collectively, these data suggest that native mussels play an integral role in this ecosystem by sequestering suspended materials that can be used by other benthic organisms.

  20. Atmospheric feedbacks in North Africa from an irrigated, afforested Sahara

    NASA Astrophysics Data System (ADS)

    Kemena, Tronje Peer; Matthes, Katja; Martin, Thomas; Wahl, Sebastian; Oschlies, Andreas

    2018-06-01

    Afforestation of the Sahara has been proposed as a climate engineering method to sequester a substantial amount of carbon dioxide, potentially effective to mitigate climate change. Earlier studies predicted changes in the atmospheric circulation system. These atmospheric feedbacks raise questions about the self-sustainability of such an intervention, but have not been investigated in detail. Here, we investigate changes in precipitation and circulation in response to Saharan large-scale afforestation and irrigation with NCAR's CESM-WACCM Earth system model. Our model results show a Saharan temperature reduction by 6 K and weak precipitation enhancement by 267 mm/year over the Sahara. Only 26% of the evapotranspirated water re-precipitates over the Saharan Desert, considerably large amounts are advected southward to the Sahel zone and enhance the West African monsoon (WAM). Different processes cause circulation and precipitation changes over North Africa. The increase in atmospheric moisture leads to radiative cooling above the Sahara and increased high-level cloud coverage as well as atmospheric warming above the Sahel zone. Both lead to a circulation anomaly with descending air over the Sahara and ascending air over the Sahel zone. Together with changes in the meridional temperature gradient, this results in a southward shift of the inner-tropical front. The strengthening of the Tropical easterly jet and the northward displacement of the African easterly jet is associated with a northward displacement and strengthening of the WAM precipitation. Our results suggest complex atmospheric circulation feedbacks, which reduce the precipitation potential over an afforested Sahara and enhance WAM precipitation.

  1. Soil carbon sequestration is a climate stabilization wedge: comments on Sommer and Bossio (2014).

    PubMed

    Lassaletta, Luis; Aguilera, Eduardo

    2015-04-15

    Sommer and Bossio (2014) model the potential soil organic carbon (SOC) sequestration in agricultural soils (croplands and grasslands) during the next 87 years, concluding that this process cannot be considered as a climate stabilization wedge. We argue, however, that the amounts of SOC potentially sequestered in both scenarios (pessimistic and optimistic) fulfil the requirements for being considered as wedge because in both cases at least 25 GtC would be sequestered during the next 50 years. We consider that it is precisely in the near future, and meanwhile other solutions are developed, when this stabilization effort is most urgent even if after some decades the sequestration rate is significantly reduced. Indirect effects of SOC sequestration on mitigation could reinforce the potential of this solution. We conclude that the sequestration of organic carbon in agricultural soils as a climate change mitigation tool still deserves important attention for scientists, managers and policy makers. Copyright © 2015 Elsevier Ltd. All rights reserved.

  2. Seasonal copepod lipid pump promotes carbon sequestration in the deep North Atlantic

    PubMed Central

    Jónasdóttir, Sigrún Huld; Visser, André W.; Richardson, Katherine; Heath, Michael R.

    2015-01-01

    Estimates of carbon flux to the deep oceans are essential for our understanding of global carbon budgets. Sinking of detrital material (“biological pump”) is usually thought to be the main biological component of this flux. Here, we identify an additional biological mechanism, the seasonal “lipid pump,” which is highly efficient at sequestering carbon into the deep ocean. It involves the vertical transport and metabolism of carbon rich lipids by overwintering zooplankton. We show that one species, the copepod Calanus finmarchicus overwintering in the North Atlantic, sequesters an amount of carbon equivalent to the sinking flux of detrital material. The efficiency of the lipid pump derives from a near-complete decoupling between nutrient and carbon cycling—a “lipid shunt,” and its direct transport of carbon through the mesopelagic zone to below the permanent thermocline with very little attenuation. Inclusion of the lipid pump almost doubles the previous estimates of deep-ocean carbon sequestration by biological processes in the North Atlantic. PMID:26338976

  3. Potential of global croplands and bioenergy crops for climate change mitigation through deployment for enhanced weathering.

    PubMed

    Kantola, Ilsa B; Masters, Michael D; Beerling, David J; Long, Stephen P; DeLucia, Evan H

    2017-04-01

    Conventional row crop agriculture for both food and fuel is a source of carbon dioxide (CO 2 ) and nitrous oxide (N 2 O) to the atmosphere, and intensifying production on agricultural land increases the potential for soil C loss and soil acidification due to fertilizer use. Enhanced weathering (EW) in agricultural soils-applying crushed silicate rock as a soil amendment-is a method for combating global climate change while increasing nutrient availability to plants. EW uses land that is already producing food and fuel to sequester carbon (C), and reduces N 2 O loss through pH buffering. As biofuel use increases, EW in bioenergy crops offers the opportunity to sequester CO 2 while reducing fossil fuel combustion. Uncertainties remain in the long-term effects and global implications of large-scale efforts to directly manipulate Earth's atmospheric CO 2 composition, but EW in agricultural lands is an opportunity to employ these soils to sequester atmospheric C while benefitting crop production and the global climate. © 2017 The Author(s).

  4. Scattering and sequestering of blow-up moduli in local string models

    NASA Astrophysics Data System (ADS)

    Conlon, Joseph P.; Witkowski, Lukas T.

    2011-12-01

    We study the scattering and sequestering of blow-up fields - either local to or distant from a visible matter sector - through a CFT computation of the dependence of physical Yukawa couplings on the blow-up moduli. For a visible sector of D3-branes on orbifold singularities we compute the disk correlator left< {tau_s^{{(1)}}tau_s^{{(2)}}...tau_s^{{(n)}}ψ ψ φ } rightrangle between orbifold blow-up moduli and matter Yukawa couplings. For n = 1 we determine the full quantum and classical correlator. This result has the correct factorisation onto lower 3-point functions and also passes numerous other consistency checks. For n > 1 we show that the structure of picture-changing applied to the twist operators establishes the sequestering of distant blow-up moduli at disk level to all orders in α'. We explain how these results are relevant to suppressing soft terms to scales parametrically below the gravitino mass. By giving vevs to the blow-up fields we can move into the smooth limit and thereby derive CFT results for the smooth Swiss-cheese Calabi-Yaus that appear in the Large Volume Scenario.

  5. Large-scale sequestration of atmospheric carbon via plant roots in natural and agricultural ecosystems: why and how.

    PubMed

    Kell, Douglas B

    2012-06-05

    The soil holds twice as much carbon as does the atmosphere, and most soil carbon is derived from recent photosynthesis that takes carbon into root structures and further into below-ground storage via exudates therefrom. Nonetheless, many natural and most agricultural crops have roots that extend only to about 1 m below ground. What determines the lifetime of below-ground C in various forms is not well understood, and understanding these processes is therefore key to optimising them for enhanced C sequestration. Most soils (and especially subsoils) are very far from being saturated with organic carbon, and calculations show that the amounts of C that might further be sequestered (http://dbkgroup.org/carbonsequestration/rootsystem.html) are actually very great. Breeding crops with desirable below-ground C sequestration traits, and exploiting attendant agronomic practices optimised for individual species in their relevant environments, are therefore important goals. These bring additional benefits related to improvements in soil structure and in the usage of other nutrients and water.

  6. Accelerated weathering of limestone for CO2 mitigation opportunities for the stone and cement industries

    USGS Publications Warehouse

    Langer, W.H.; Juan, C.A.S.; Rau, G.H.; Caldeira, K.

    2009-01-01

    Large amounts of limestone fines coproduced during the processing of crushed limestone may be useful in the sequestration of carbon dioxide (CO 2). Accelerated weathering of limestone (AWL) is proposed as a low-tech method to capture and sequester CO2 from fossil fuel-fired power plants and other point-sources such as cement manufacturing. AWL reactants are readily available, inexpensive, and environmentally benign. Waste CO 2 is hydrated with water to produce carbonic acid, which then reacts with and is neutralized by limestone fines, thus converting CO2 gas to dissolved calcium bicarbonate. AWL waste products can be disposed of in the ocean. Feasibility requires access to an inexpensive source of limestone and to seawater, thus limiting AWL facilities within about 10 km of the coastline. The majority of U.S. coastal power generating facilities are within economical transport distance of limestone resources. AWL presents opportunities for collaborative efforts among the crushed stone industry, electrical utilities, cement manufactures, and research scientists.

  7. Transmission of atmospherically derived trace elements through an undeveloped, forested Maryland watershed

    USGS Publications Warehouse

    Scudlark, J.R.; Rice, Karen C.; Conko, Kathryn M.; Bricker, Owen P.; Church, T.M.

    2005-01-01

    The transmission of atmospherically derived trace elements (Al, As, Cd, Cr, Cu, Fe, Mn, Ni, Pb, Se, and Zn) was evaluated in a small, undeveloped, forested watershed located in north-central Maryland. Atmospheric input was determined for wet-only and vegetative throughfall components. Annual throughfall fluxes were significantly enriched over incident precipitation for most elements, although some elements exhibited evidence of canopy release (Mn) or preferential uptake (As, Cr, and Se). Stream export was gauged based on systematic sampling under varied flow regimes. Particle loading appears to contribute significantly to watershed export (> 10%) for only As, Pb, and Fe, and then only during large precipitation/runoff events. The degree of watershed transmission for each trace element was evaluated based on a comparison of total, net atmospheric input (throughfall) to stream export over an annual hydrologic cycle. This comparison indicates that the atmospheric input of some elements (Al, Cd, Ni, Zn) is effectively transmitted through the watershed, but other elements (Pb, As, Se, Fe, Cr, Cu) appear to be strongly sequestered, in the respective orders noted. Results suggest that precipitation and subsequent soil pH are the primary factors that determine the mobility of sequestered trace element phases.To further resolve primary atmospheric and secondary weathering components, the geochemical model NETPATH was applied. Results indicate that minerals dissolved include chlorite, plagioclase feldspar, epidote, and potassium feldspar; phases formed were kaolinite, pyrite, and silica. The model also indicates that weathering processes contribute negligible amounts of trace elements to stream export, indicative of the unreactive orthoquartzite bedrock lithology underlying the watershed. Thus, the stream export of trace elements primarily reflects atmospheric deposition to the local watershed.

  8. On the rebound: soil organic carbon stocks can bounce back to near forest levels when agroforests replace agriculture in southern India

    NASA Astrophysics Data System (ADS)

    Hombegowda, H. C.; van Straaten, O.; Köhler, M.; Hölscher, D.

    2016-01-01

    Tropical agroforestry has an enormous potential to sequester carbon while simultaneously producing agricultural yields and tree products. The amount of soil organic carbon (SOC) sequestered is influenced by the type of the agroforestry system established, the soil and climatic conditions, and management. In this regional-scale study, we utilized a chronosequence approach to investigate how SOC stocks changed when the original forests are converted to agriculture, and then subsequently to four different agroforestry systems (AFSs): home garden, coffee, coconut and mango. In total we established 224 plots in 56 plot clusters across 4 climate zones in southern India. Each plot cluster consisted of four plots: a natural forest reference, an agriculture reference and two of the same AFS types of two ages (30-60 years and > 60 years). The conversion of forest to agriculture resulted in a large loss the original SOC stock (50-61 %) in the top meter of soil depending on the climate zone. The establishment of home garden and coffee AFSs on agriculture land caused SOC stocks to rebound to near forest levels, while in mango and coconut AFSs the SOC stock increased only slightly above the agriculture SOC stock. The most important variable regulating SOC stocks and its changes was tree basal area, possibly indicative of organic matter inputs. Furthermore, climatic variables such as temperature and precipitation, and soil variables such as clay fraction and soil pH were likewise all important regulators of SOC and SOC stock changes. Lastly, we found a strong correlation between tree species diversity in home garden and coffee AFSs and SOC stocks, highlighting possibilities to increase carbon stocks by proper tree species assemblies.

  9. On the rebound: soil organic carbon stocks can bounce back to near forest levels when agroforests replace agriculture in southern India

    NASA Astrophysics Data System (ADS)

    Hombegowda, H. C.; van Straaten, O.; Köhler, M.; Hölscher, D.

    2015-08-01

    Tropical agroforestry has an enormous potential to sequester carbon while simultaneously producing agricultural yields and tree products. The amount of soil organic carbon (SOC) sequestered is however influenced by the type of the agroforestry system established, the soil and climatic conditions and management. In this regional scale study, we utilized a chronosequence approach to investigate how SOC stocks changed when the original forests are converted to agriculture, and then subsequently to four different agroforestry systems (AFSs): homegarden, coffee, coconut and mango. In total we established 224 plots in 56 plot clusters across four climate zones in southern India. Each plot cluster consisted of four plots: a natural forest reference plot, an agriculture reference and two of the same AFS types of two ages (30-60 years and > 60 years). The conversion of forest to agriculture resulted in a large loss the original SOC stock (50-61 %) in the top meter of soil depending on the climate zone. The establishment of homegarden and coffee AFSs on agriculture land caused SOC stocks to rebound to near forest levels, while in mango and coconut AFSs the SOC stock increased only slightly above the agriculture stock. The most important variable regulating SOC stocks and its changes was tree basal area, possibly indicative of organic matter inputs. Furthermore, climatic variables such as temperature and precipitation, and soil variables such as clay fraction and soil pH were likewise all important regulators of SOC and SOC stock changes. Lastly, we found a strong correlation between tree species diversity in homegarden and coffee AFSs and SOC stocks, highlighting possibilities to increase carbon stocks by proper tree species assemblies.

  10. Forestry mitigation potential and costs in developing countries - Preface

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sathaye, Jayant A.; Makundi, Willy; Andrasko, Kenneth

    2001-01-01

    The forest sector in Tanzania offers ample opportunities to reduce greenhouse gas emissions (GHG) and sequestered carbon (C) in terrestrial ecosystems. More than 90% of the country's demand for primary energy is obtained from biomass mostly procured unsustainably from natural forests. This study examines the potential to sequester C through expansion of forest plantations aimed at reducing the dependence on natural forest for wood fuel production, as well as increase the country's output of industrial wood from plantations. These were compared ton conservation options in the tropical and miombo ecosystems. Three sequestration options were analyzed, involving the establishment of shortmore » rotation and long rotation plantations on about 1.7 x 106 hectares. The short rotation community forest option has a potential to sequester an equilibrium amount of 197.4 x 106 Mg C by 2024 at a net benefit of $79.5 x 106, while yielding a NPV of $0.46 Mg-1 C. The long rotation options for softwood and hardwood plantations will reach an equilibrium sequestration of 5.6 and 11.8 x 106 Mg C at a negative NPV of $0.60 Mg-1 C and $0.32 Mg-1 C. The three options provide cost competitive opportunities for sequestering about 7.5 x 106 Mg C yr -1 while providing desired forest products and easing the pressure on the natural forests in Tanzania. The endowment costs of the sequestration options were all found to be cheaper than the emission avoidance cost for conservation options which had an average cost of $1.27 Mg-1 C, rising to $7.5 Mg-1 C under some assumptions on vulnerability to encroachment. The estimates shown here may represent the upper bound, because the actual potential will be influenced by market prices for inputs and forest products, land use policy constraints and the structure of global C transactions.« less

  11. Potential and cost of carbon sequestration in the Tanzanian forest sector

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Makundi, Willy R.

    2001-01-01

    The forest sector in Tanzania offers ample opportunities to reduce greenhouse gas emissions (GHG) and sequestered carbon (C) in terrestrial ecosystems. More than 90% of the country's demand for primary energy is obtained from biomass mostly procured unsustainably from natural forests. This study examines the potential to sequester C through expansion of forest plantations aimed at reducing the dependence on natural forest for wood fuel production, as well as increase the country's output of industrial wood from plantations. These were compared ton conservation options in the tropical and miombo ecosystems. Three sequestration options were analyzed, involving the establishment of shortmore » rotation and long rotation plantations on about 1.7 x 106 hectares. The short rotation community forest option has a potential to sequester an equilibrium amount of 197.4 x 106 Mg C by 2024 at a net benefit of $79.5 x 106, while yielding a NPV of $0.46 Mg-1 C. The long rotation options for softwood and hardwood plantations will reach an equilibrium sequestration of 5.6 and 11.8 x 106 Mg C at a negative NPV of $0.60 Mg-1 C and $0.32 Mg-1 C. The three options provide cost competitive opportunities for sequestering about 7.5 x 106 Mg C yr -1 while providing desired forest products and easing the pressure on the natural forests in Tanzania. The endowment costs of the sequestration options were all found to be cheaper than the emission avoidance cost for conservation options which had an average cost of $1.27 Mg-1 C, rising to $ 7.5 Mg-1 C under some assumptions on vulnerability to encroachment. The estimates shown here may represent the upper bound, because the actual potential will be influenced by market prices for inputs and forest products, land use policy constraints and the structure of global C transactions.« less

  12. Diet quality can play a critical role in defense efficacy against parasitoids and pathogens in the Glanville fritillary (Melitaea cinxia).

    PubMed

    Laurentz, Minna; Reudler, Joanneke H; Mappes, Johanna; Friman, Ville; Ikonen, Suvi; Lindstedt, Carita

    2012-01-01

    Numerous herbivorous insect species sequester noxious chemicals from host plants that effectively defend against predators, and against parasitoids and pathogens. Sequestration of these chemicals may be expensive and involve a trade off with other fitness traits. Here, we tested this hypothesis. We reared Glanville fritillary butterfly (Melitaea cinxia L.) larvae on plant diets containing low- and high-levels of iridoid glycosides (IGs) (mainly aucubin and catalpol) and tested: 1) whether IGs affect the herbivore's defense against parasitoids (measured as encapsulation rate) and bacterial pathogens (measured as herbivore survival); 2) whether parasitoid and bacterial defenses interact; and 3) whether sequestration of the plant's defense chemicals incurs any life history costs. Encapsulation rates were stronger when there were higher percentages of catalpol in the diet. Implanted individuals had greater amounts of IGs in their bodies as adults. This suggests that parasitized individuals may sequester more IGs, increase their feeding rate after parasitism, or that there is a trade off between detoxification efficiency and encapsulation rate. Larval survival after bacterial infection was influenced by diet, but probably not by diet IG content, as changes in survival did not correlate linearly with the levels of IGs in the diet. However, M. cinxia larvae with good encapsulation abilities were better defended against bacteria. We did not find any life history costs of diet IG concentration for larvae. These results suggest that the sequestering of plant defense chemicals can help herbivorous insects to defend against parasitoids.

  13. Quasifixed points from scalar sequestering and the little hierarchy problem in supersymmetry

    NASA Astrophysics Data System (ADS)

    Martin, Stephen P.

    2018-02-01

    In supersymmetric models with scalar sequestering, superconformal strong dynamics in the hidden sector suppresses the low-energy couplings of mass dimension 2, compared to the squares of the dimension-1 parameters. Taking into account restrictions on the anomalous dimensions in superconformal theories, I point out that the interplay between the hidden and visible sector renormalizations gives rise to quasifixed point running for the supersymmetric Standard Model squared mass parameters, rather than driving them to 0. The extent to which this dynamics can ameliorate the little hierarchy problem in supersymmetry is studied. Models of this type in which the gaugino masses do not unify are arguably more natural, and are certainly more likely to be accessible, eventually, to the Large Hadron Collider.

  14. Aggregation of ALS-linked FUS mutant sequesters RNA binding proteins and impairs RNA granules formation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Takanashi, Keisuke; Yamaguchi, Atsushi, E-mail: atsyama@restaff.chiba-u.jp

    Highlights: • Aggregation of ALS-linked FUS mutant sequesters ALS-associated RNA-binding proteins (FUS wt, hnRNP A1, and hnRNP A2). • Aggregation of ALS-linked FUS mutant sequesters SMN1 in the detergent-insoluble fraction. • Aggregation of ALS-linked FUS mutant reduced the number of speckles in the nucleus. • Overproduced ALS-linked FUS mutant reduced the number of processing-bodies (PBs). - Abstract: Protein aggregate/inclusion is one of hallmarks for neurodegenerative disorders including amyotrophic lateral sclerosis (ALS). FUS/TLS, one of causative genes for familial ALS, encodes a multifunctional DNA/RNA binding protein predominantly localized in the nucleus. C-terminal mutations in FUS/TLS cause the retention and the inclusionmore » of FUS/TLS mutants in the cytoplasm. In the present study, we examined the effects of ALS-linked FUS mutants on ALS-associated RNA binding proteins and RNA granules. FUS C-terminal mutants were diffusely mislocalized in the cytoplasm as small granules in transiently transfected SH-SY5Y cells, whereas large aggregates were spontaneously formed in ∼10% of those cells. hnRNP A1, hnRNP A2, and SMN1 as well as FUS wild type were assembled into stress granules under stress conditions, and these were also recruited to FUS mutant-derived spontaneous aggregates in the cytoplasm. These aggregates stalled poly(A) mRNAs and sequestered SMN1 in the detergent insoluble fraction, which also reduced the number of nuclear oligo(dT)-positive foci (speckles) in FISH (fluorescence in situ hybridization) assay. In addition, the number of P-bodies was decreased in cells harboring cytoplasmic granules of FUS P525L. These findings raise the possibility that ALS-linked C-terminal FUS mutants could sequester a variety of RNA binding proteins and mRNAs in the cytoplasmic aggregates, which could disrupt various aspects of RNA equilibrium and biogenesis.« less

  15. Pseudomonas putida growing at low temperature shows increased levels of CrcZ and CrcY sRNAs, leading to reduced Crc-dependent catabolite repression.

    PubMed

    Fonseca, Pilar; Moreno, Renata; Rojo, Fernando

    2013-01-01

    The Crc protein of Pseudomonas inhibits the expression of genes involved in the transport and assimilation of a number of non-preferred carbon sources when preferred substrates are available, thus coordinating carbon metabolism. Crc acts by binding to target mRNAs, inhibiting their translation. In Pseudomonas putida, the amount of free Crc available is controlled by two sRNAs, CrcY and CrcZ, which bind to and sequester Crc. The levels of these sRNAs vary according to metabolic conditions. Pseudomonas putida grows optimally at 30°C, but can also thrive at 10°C. The present work shows that when cells grow exponentially at 10°C, the repressive effect of Crc on many genes is significantly reduced compared with that seen at 30°C. Total Crc levels were similar at both temperatures, but those of CrcZ and CrcY were significantly higher at 10°C. Therefore, Crc-mediated repression may, at least in part, be reduced at 10°C because the fraction of Crc protein sequestered by CrcZ and CrcY is larger, reducing the amount of free Crc available to bind its targets. This may help P. putida to face cold stress. The results reported might help understanding the behaviour of this bacterium in bioremediation or rhizoremediation strategies at low temperatures. © 2012 Society for Applied Microbiology and Blackwell Publishing Ltd.

  16. Carbon sequestration in two created riverine wetlands in the midwestern United States.

    PubMed

    Bernal, Blanca; Mitsch, William J

    2013-07-01

    Wetlands have the ability to accumulate significant amounts of carbon (C) and thus could provide an effective approach to mitigate greenhouse gas accumulation in the atmosphere. Wetland hydrology, age, and management can affect primary productivity, decomposition, and ultimately C sequestration in riverine wetlands, but these aspects of wetland biogeochemistry have not been adequately investigated, especially in created wetlands. In this study we investigate the ability of created freshwater wetlands to sequester C by determining the sediment accretion and soil C accumulation of two 15-yr-old created wetlands in central Ohio-one planted and one naturally colonized. We measured the amount of sediment and soil C accumulated over the parent material and found that these created wetlands accumulated an average of 242 g C m yr, 70% more than a similar natural wetland in the region and 26% more than the rate estimated for these same wetlands 5 yr before this study. The C sequestration of the naturally colonized wetland was 22% higher than that of the planted wetland (267 ± 17 vs. 219 ± 15 g C m yr, respectively). Soil C accrual accounted for 66% of the aboveground net primary productivity on average. Open water communities had the highest C accumulation rates in both wetlands. This study shows that created wetlands can be natural, cost-effective tools to sequester C to mitigate the effect of greenhouse gas emissions. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  17. Extraction of extracellular lipids from chemoautotrophic bacteria Serratia sp. ISTD04 for production of biodiesel.

    PubMed

    Bharti, Randhir K; Srivastava, Shaili; Thakur, Indu Shekhar

    2014-08-01

    A CO2 sequestering bacterial strain, Serratia sp. ISTD04, that produces a significant amount of extracellular lipids was isolated from marble mine rocks. (14)C labeling analysis revealed that the rate of assimilation of CO2 by the strain is 0.756×10(-9)μmolCO2fixedcell(-1)h(-1). It was found to produce 466mg/l of extracellular lipid which was characterized using (1)H NMR. After transesterification of lipids, the total saturated and unsaturated FAME was found to be 51% and 49% respectively. The major FAME contained in the biodiesel were palmitic acid methyl ester (C16:0), oleic acid methyl ester (C18:1) and 10-nonadecenoic acid methyl ester (C19:1). Biodiesel produced by Serratia sp. ISTD04 is balanced in terms of FAME composition of good quality. It also contained higher proportion of oleic acid (35%) which makes it suitable for utilization in existing engines. Thus, the strain can be harnessed commercially to sequester CO2 into biodiesel. Copyright © 2014 Elsevier Ltd. All rights reserved.

  18. Prehistorically modified soils of central Amazonia: a model for sustainable agriculture in the twenty-first century.

    PubMed

    Glaser, Bruno

    2007-02-28

    Terra Preta soils of central Amazonia exhibit approximately three times more soil organic matter, nitrogen and phosphorus and 70 times more charcoal compared to adjacent infertile soils. The Terra Preta soils were generated by pre-Columbian native populations by chance or intentionally adding large amounts of charred residues (charcoal), organic wastes, excrements and bones. In this paper, it is argued that generating new Terra Preta sites ('Terra Preta nova') could be the basis for sustainable agriculture in the twenty-first century to produce food for billions of people, and could lead to attaining three Millennium Development Goals: (i) to combat desertification, (ii) to sequester atmospheric CO2 in the long term, and (iii) to maintain biodiversity hotspots such as tropical rainforests. Therefore, large-scale generation and utilization of Terra Preta soils would decrease the pressure on primary forests that are being extensively cleared for agricultural use with only limited fertility and sustainability and, hence, only providing a limited time for cropping. This would maintain biodiversity while mitigating both land degradation and climate change. However, it should not be overlooked that the infertility of most tropical soils (and associated low population density) is what could have prevented tropical forests undergoing large-scale clearance for agriculture. Increased fertility may increase the populations supported by shifting cultivation, thereby maintaining and increasing pressure on forests.

  19. Transport of metals and sulphur in magmas by flotation of sulphide melt on vapour bubbles

    NASA Astrophysics Data System (ADS)

    Mungall, J. E.; Brenan, J. M.; Godel, B.; Barnes, S. J.; Gaillard, F.

    2015-03-01

    Emissions of sulphur and metals from magmas in Earth’s shallow crust can have global impacts on human society. Sulphur-bearing gases emitted into the atmosphere during volcanic eruptions affect climate, and metals and sulphur can accumulate in the crust above a magma reservoir to form giant copper and gold ore deposits, as well as massive sulphur anomalies. The volumes of sulphur and metals that accumulate in the crust over time exceed the amounts that could have been derived from an isolated magma reservoir. They are instead thought to come from injections of multiple new batches of vapour- and sulphide-saturated magmas into the existing reservoirs. However, the mechanism for the selective upward transfer of sulphur and metals is poorly understood because their main carrier phase, sulphide melt, is dense and is assumed to settle to the bottoms of magma reservoirs. Here we use laboratory experiments as well as gas-speciation and mass-balance models to show that droplets of sulphide melt can attach to vapour bubbles to form compound drops that float. We demonstrate the feasibility of this mechanism for the upward mobility of sulphide liquids to the shallow crust. Our work provides a mechanism for the atmospheric release of large amounts of sulphur, and contradicts the widely held assumption that dense sulphide liquids rich in sulphur, copper and gold will remain sequestered in the deep crust.

  20. Expression of an Arabidopsis sodium/proton antiporter gene (AtNHX1)in peanut to improve salt tolerance

    USDA-ARS?s Scientific Manuscript database

    Salinity is a major environmental stress that affects agricultural productivity worldwide. One approach to improving salt tolerance in crops is through high expression of the Arabidopsis gene AtNHX1, which encodes a vacuolar sodium/proton antiporter that sequesters excess sodium ion into the large i...

  1. Copper mobilization affected by weather conditions in a stormwater detention system receiving runoff waters from vineyard soils (Champagne, France).

    PubMed

    Banas, D; Marin, B; Skraber, S; Chopin, E I B; Zanella, A

    2010-02-01

    Copper, a priority substance on the EU-Water Framework Directive list, is widely used to protect grapevines against fungus diseases. Many vineyards being located on steep slopes, large amounts of Cu could be discharged in downstream systems by runoff water. The efficiency of stormwater detention basins to retain copper in a vineyard catchment was estimated. Suspended solids, dissolved (Cu(diss)) and total Cu (Cu(tot)) concentrations were monitored in runoff water, upstream, into and downstream from a detention pond. Mean Cu(tot) concentrations in entering water was 53.6 microg/L whereas it never exceeded 2.4 microg/L in seepage. Cu(tot) concentrations in basin water (>100 microg/L in 24% of the samples) exceeded LC(50) values for several aquatic animals. Copper was principally sequestered by reduced compounds in the basin sediments (2/3 of Cu(tot)). Metal sequestration was reversible since sediment resuspension resulted in Cu remobilization. Wind velocity controlled resuspension, explained 70% of Cu(diss) variability and could help predicting Cu mobilization. Copyright (c) 2009 Elsevier Ltd. All rights reserved.

  2. Effects of intracellular injection of calcium buffers on light adaptation in Limulus ventral photoreceptors

    PubMed Central

    1975-01-01

    The calcium sequestering agent, EGTA, was injected into Limulus ventral photoreceptors. Before injection, the inward membrane current induced by a long stimulus had a large initial transient which declined to a smaller plateau. Iontophoretic injection of EGTA tended to prevent the decline from transient to plateau. Before injection the plateau response was a nonlinear function of light intensity. After EGTA injection the response-intensity curves tended to become linear. Before injection, bright lights lowered the sensitivity as determined with subsequent test flashes. EGTA injection decreased the light-induced changes in sensitivity. Ca-EGTA buffers having different levels of free calcium were pressure-injected into ventral photoreceptors; the higher the level of free calcium, the lower the sensitivity measured after injection. The effects of inotophoretic injection of EGTA were not mimicked by injection or similar amounts of sulfate and the effects of pressure injection of EGTA buffer solutions were not mimicked by injection of similar volumes of pH buffer or mannitol. The data are consistent with the hypothesis that light adaptation is mediated by a rise of the intracellular free calcium concentration. PMID:810540

  3. The Physiology and Ecology of Diapause in Marine Copepods.

    PubMed

    Baumgartner, Mark F; Tarrant, Ann M

    2017-01-03

    Diapause is a type of dormancy that requires preparation, typically precedes the onset of unfavorable conditions, and necessitates a period of arrest before development can proceed. Two ecologically important groups of copepods have incorporated diapausing stages into their life histories. In freshwater, estuarine, and coastal environments, species within the Centropagoidea superfamily can produce resting eggs containing embryos that may be quiescent, diapausing, or in some intermediate state. Resting eggs sink into the sediments, remain viable over months to years, and form a reservoir from which the planktonic population is reestablished. In coastal and oceanic environments, copepods within the Calanidae and Eucalanidae families can enter diapause during late juvenile (copepodid) or adult stages. These copepods accumulate large amounts of lipids before they migrate into deep water and diapause for several months. Through respiration, diapausing copepods may sequester more carbon in the deep ocean than any other biogeochemical process, and changes in diapause phenology associated with climate change (particularly reduction in diapause duration) could have a significant impact not only on regional ecosystems, but on global climate as well.

  4. Expression of Shewanella oneidensis MR-1 [FeFe]-Hydrogenase Genes in Anabaena sp. Strain PCC 7120

    PubMed Central

    Gärtner, Katrin; Lechno-Yossef, Sigal; Cornish, Adam J.; Wolk, C. Peter

    2012-01-01

    H2 generated from renewable resources holds promise as an environmentally innocuous fuel that releases only energy and water when consumed. In biotechnology, photoautotrophic oxygenic diazotrophs could produce H2 from water and sunlight using the cells' endogenous nitrogenases. However, nitrogenases have low turnover numbers and require large amounts of ATP. [FeFe]-hydrogenases found in other organisms can have 1,000-fold higher turnover numbers and no specific requirement for ATP but are very O2 sensitive. Certain filamentous cyanobacteria protect nitrogenase from O2 by sequestering the enzyme within internally micro-oxic, differentiated cells called heterocysts. We heterologously expressed the [FeFe]-hydrogenase operon from Shewanella oneidensis MR-1 in Anabaena sp. strain PCC 7120 using the heterocyst-specific promoter PhetN. Active [FeFe]-hydrogenase was detected in and could be purified from aerobically grown Anabaena sp. strain PCC 7120, but only when the organism was grown under nitrate-depleted conditions that elicited heterocyst formation. These results suggest that the heterocysts protected the [FeFe]-hydrogenase against inactivation by O2. PMID:23023750

  5. Magnitude and Mechanism of Siderophore-Mediated Competition at Low Iron Solubility in the Pseudomonas aeruginosa Pyochelin System.

    PubMed

    Schiessl, Konstanze T; Janssen, Elisabeth M-L; Kraemer, Stephan M; McNeill, Kristopher; Ackermann, Martin

    2017-01-01

    A central question in microbial ecology is whether microbial interactions are predominantly cooperative or competitive. The secretion of siderophores, microbial iron chelators, is a model system for cooperative interactions. However, siderophores have also been shown to mediate competition by sequestering available iron and making it unavailable to competitors. The details of how siderophores mediate competition are not well understood, especially considering the complex distribution of iron phases in the environment. One pertinent question is whether sequestering iron through siderophores can indeed be effective in natural conditions; many natural environments are characterized by large pools of precipitated iron, and it is conceivable that any soluble iron that is sequestered by siderophores is replenished by the dissolution of these precipitated iron sources. Our goal here was to address this issue, and investigate the magnitude and mechanism of siderophore-mediated competition in the presence of precipitated iron. We combined experimental work with thermodynamic modeling, using Pseudomonas aeruginosa as a model system and ferrihydrite precipitates as the iron source with low solubility. Our experiments show that competitive growth inhibition by the siderophore pyochelin is indeed efficient, and that inhibition of a competitor can even have a stronger growth-promoting effect than solubilization of precipitated iron. Based on the results of our thermodynamic models we conclude that the observed inhibition of a competitor is effective because sequestered iron is only very slowly replenished by the dissolution of precipitated iron. Our research highlights the importance of competitive benefits mediated by siderophores, and underlines that the dynamics of siderophore production and uptake in environmental communities could be a signature of competitive, not just cooperative, dynamics.

  6. A review of mineral carbonation technologies to sequester CO2.

    PubMed

    Sanna, A; Uibu, M; Caramanna, G; Kuusik, R; Maroto-Valer, M M

    2014-12-07

    Carbon dioxide (CO2) capture and sequestration includes a portfolio of technologies that can potentially sequester billions of tonnes of CO2 per year. Mineral carbonation (MC) is emerging as a potential CCS technology solution to sequester CO2 from smaller/medium emitters, where geological sequestration is not a viable option. In MC processes, CO2 is chemically reacted with calcium- and/or magnesium-containing materials to form stable carbonates. This work investigates the current advancement in the proposed MC technologies and the role they can play in decreasing the overall cost of this CO2 sequestration route. In situ mineral carbonation is a very promising option in terms of resources available and enhanced security, but the technology is still in its infancy and transport and storage costs are still higher than geological storage in sedimentary basins ($17 instead of $8 per tCO2). Ex situ mineral carbonation has been demonstrated on pilot and demonstration scales. However, its application is currently limited by its high costs, which range from $50 to $300 per tCO2 sequestered. Energy use, the reaction rate and material handling are the key factors hindering the success of this technology. The value of the products seems central to render MC economically viable in the same way as conventional CCS seems profitable only when combined with EOR. Large scale projects such as the Skyonic process can help in reducing the knowledge gaps on MC fundamentals and provide accurate costing and data on processes integration and comparison. The literature to date indicates that in the coming decades MC can play an important role in decarbonising the power and industrial sector.

  7. Assessing the 100-Year Climate Change Mitigation Potential of Large-Scale Tropical Forest Restoration Under the Bonn Challenge

    NASA Astrophysics Data System (ADS)

    Wheeler, C. E.; Mitchard, E. T.; Lewis, S. L.

    2017-12-01

    Restoring degraded and deforested tropical lands to sequester carbon is widely considered to offer substantial climate change mitigation opportunities, if conducted over large spatial scales. Despite this assertion, explicit estimates of how much carbon could be sequestered because of large-scale restoration are rare and have large uncertainties. This is principally due to the many different characteristics of land available for restoration, and different potential restoration activities, which together cause very different rates of carbon sequestration. For different restoration pathways: natural regeneration of degraded and secondary forest, timber plantations and agroforestry, we estimate carbon sequestration rates from the published literature. Then based on tropical restoration commitments made under the Bonn challenge and using carbon density maps, these carbon sequestration rates were used to predict total pan-tropical carbon sequestration to 2100. Restoration of degraded or secondary forest via natural regeneration offers the greatest carbon sequestration potential, considerably exceeding the carbon captured by either timber plantations or agroforestry. This is predominantly due to naturally regenerating forests representing a more permanent store of carbon in comparison to timber plantations and agroforestry land-use options, which, due to their rotational nature, result in the sequential return of carbon to the atmosphere. If the Bonn Challenge is to achieve its ambition of providing substantial climate change mitigation from restoration it must incorporate large areas of natural regeneration back to an intact forest state, otherwise it stands to be a missed opportunity in helping meet the Paris climate change goals.

  8. Total carbon accumulation in a tropical forest landscape.

    PubMed

    Sierra, Carlos A; Del Valle, Jorge I; Restrepo, Hector I

    2012-12-19

    Regrowing tropical forests worldwide sequester important amounts of carbon and restore part of the C emissions emitted by deforestation. However, there are large uncertainties concerning the rates of carbon accumulation after the abandonment of agricultural and pasture land. We report here accumulation of total carbon stocks (TCS) in a chronosequence of secondary forests at a mid-elevation landscape (900-1200 m asl) in the Andean mountains of Colombia. We found positive accumulation rates for all ecosystem pools except soil carbon, which showed no significant trend of recovery after 36 years of secondary succession. We used these data to develop a simple model to predict accumulation of TCS over time. This model performed remarkably well predicting TCS at other chronosequences in the Americas (Root Mean Square Error < 40 Mg C ha-1), which provided an opportunity to explore different assumptions in the calculation of large-scale carbon budgets. Simulations of TCS with our empirical model were used to test three assumptions often made in carbon budgets: 1) the use of carbon accumulation in tree aboveground biomass as a surrogate for accumulation of TCS, 2) the implicit consideration of carbon legacies from previous land-use, and 3) the omission of landscape age in calculating accumulation rates of TCS. Our simulations showed that in many situations carbon can be released from regrowing secondary forests depending on the amount of carbon legacies and the average age of the landscape. In most cases, the rates used to predict carbon accumulation in the Americas were above the rates predicted in our simulations. These biome level rates seemed to be realistic only in landscapes not affected by carbon legacies from previous land-use and mean ages of around 10 years.

  9. Dark Radiation predictions from general Large Volume Scenarios

    NASA Astrophysics Data System (ADS)

    Hebecker, Arthur; Mangat, Patrick; Rompineve, Fabrizio; Witkowski, Lukas T.

    2014-09-01

    Recent observations constrain the amount of Dark Radiation (Δ N eff ) and may even hint towards a non-zero value of Δ N eff . It is by now well-known that this puts stringent constraints on the sequestered Large Volume Scenario (LVS), i.e. on LVS realisations with the Standard Model at a singularity. We go beyond this setting by considering LVS models where SM fields are realised on 7-branes in the geometric regime. As we argue, this naturally goes together with high-scale supersymmetry. The abundance of Dark Radiation is determined by the competition between the decay of the lightest modulus to axions, to the SM Higgs and to gauge fields, and leads to strict constraints on these models. Nevertheless, these constructions can in principle meet current DR bounds due to decays into gauge bosons alone. Further, a rather robust prediction for a substantial amount of Dark Radiation can be made. This applies both to cases where the SM 4-cycles are stabilised by D-terms and are small `by accident', i.e. tuning, as well as to fibred models with the small cycles stabilised by loops. In these constructions the DR axion and the QCD axion are the same field and we require a tuning of the initial misalignment to avoid Dark Matter overproduction. Furthermore, we analyse a closely related setting where the SM lives at a singularity but couples to the volume modulus through flavour branes. We conclude that some of the most natural LVS settings with natural values of model parameters lead to Dark Radiation predictions just below the present observational limits. Barring a discovery, rather modest improvements of present Dark Radiation bounds can rule out many of these most simple and generic variants of the LVS.

  10. Total carbon accumulation in a tropical forest landscape

    PubMed Central

    2012-01-01

    Background Regrowing tropical forests worldwide sequester important amounts of carbon and restore part of the C emissions emitted by deforestation. However, there are large uncertainties concerning the rates of carbon accumulation after the abandonment of agricultural and pasture land. We report here accumulation of total carbon stocks (TCS) in a chronosequence of secondary forests at a mid-elevation landscape (900-1200 m asl) in the Andean mountains of Colombia. Results We found positive accumulation rates for all ecosystem pools except soil carbon, which showed no significant trend of recovery after 36 years of secondary succession. We used these data to develop a simple model to predict accumulation of TCS over time. This model performed remarkably well predicting TCS at other chronosequences in the Americas (Root Mean Square Error < 40 Mg C ha-1), which provided an opportunity to explore different assumptions in the calculation of large-scale carbon budgets. Simulations of TCS with our empirical model were used to test three assumptions often made in carbon budgets: 1) the use of carbon accumulation in tree aboveground biomass as a surrogate for accumulation of TCS, 2) the implicit consideration of carbon legacies from previous land-use, and 3) the omission of landscape age in calculating accumulation rates of TCS. Conclusions Our simulations showed that in many situations carbon can be released from regrowing secondary forests depending on the amount of carbon legacies and the average age of the landscape. In most cases, the rates used to predict carbon accumulation in the Americas were above the rates predicted in our simulations. These biome level rates seemed to be realistic only in landscapes not affected by carbon legacies from previous land-use and mean ages of around 10 years. PMID:23249727

  11. The SEQUEST Family Tree

    NASA Astrophysics Data System (ADS)

    Tabb, David L.

    2015-11-01

    Since its introduction in 1994, SEQUEST has gained many important new capabilities, and a host of successor algorithms have built upon its successes. This Account and Perspective maps the evolution of this important tool and charts the relationships among contributions to the SEQUEST legacy. Many of the changes represented improvements in computing speed by clusters and graphics cards. Mass spectrometry innovations in mass accuracy and activation methods led to shifts in fragment modeling and scoring strategies. These changes, as well as the movement of laboratories and lab members, have led to great diversity among the members of the SEQUEST family.

  12. Potential mechanisms of cytosolic calcium modulation in interferon-gamma treated U937 cells

    NASA Technical Reports Server (NTRS)

    Klein, Jon B.; Mcleish, Kenneth R.; Sonnenfeld, Gerald; Dean, William L.

    1987-01-01

    The ability of interferon-gamma (IFN-gamma) to alter cytoplasmic Ca(2+) content in the monocytelike cell line U937 was investigated, using a slow Ca-channel blocker, diltiazem. In addition, the Ca-ATPase and the Ca-uptake activities were measured in isolated U937 membranes, together with the effect of inositol trisphosphate (IP3) upon the Ca(2+) release from Ca-loaded membranes. The addition of 50 U/ml INF-gamma to U937 cultures was found to increase internal Ca(2+) by about 100 percent within 3 min. The increase was significantly reduced by incubation in Ca-free buffer or by the addition of diltiazem. A crude membrane preparation from U937 cells was found to contain significant amounts of Ca-ATPase activity and to sequester Ca(2+) to a level of 8 nmol/mg in 30 sec; the addition of IP3 induced release of a portion of the sequestered Ca(2+) which was then resequestered. The results suggest that IFN-gamma causes an increase of cytoplasmic Ca(2+), in part, by the IP3-induced release from the internal storage sites and, in part, from the entry of extracellular Ca through slow channels.

  13. Melanosomal sequestration of cytotoxic drugs contributes to the intractability of malignant melanomas

    PubMed Central

    Chen, Kevin G.; Valencia, Julio C.; Lai, Barry; Zhang, Guofeng; Paterson, Jill K.; Rouzaud, François; Berens, Werner; Wincovitch, Stephen M.; Garfield, Susan H.; Leapman, Richard D.; Hearing, Vincent J.; Gottesman, Michael M.

    2006-01-01

    Multidrug resistance mechanisms underlying the intractability of malignant melanomas remain largely unknown. In this study, we demonstrate that the development of multidrug resistance in melanomas involves subcellular sequestration of intracellular cytotoxic drugs such as cis-diaminedichloroplatinum II (cisplatin; CDDP). CDDP is initially sequestered in subcellular organelles such as melanosomes, which significantly reduces its nuclear localization when compared with nonmelanoma/KB-3-1 epidermoid carcinoma cells. The melanosomal accumulation of CDDP remarkably modulates melanogenesis through a pronounced increase in tyrosinase activity. The altered melanogenesis manifested an ≈8-fold increase in both intracellular pigmentation and extracellular transport of melanosomes containing CDDP. Thus, our experiments provide evidence that melanosomes contribute to the refractory properties of melanoma cells by sequestering cytotoxic drugs and increasing melanosome-mediated drug export. Preventing melanosomal sequestration of cytotoxic drugs by inhibiting the functions of melanosomes may have great potential as an approach to improving the chemosensitivity of melanoma cells. PMID:16777967

  14. Reactive transport modeling of CO2 mineral sequestration in basaltic rocks

    NASA Astrophysics Data System (ADS)

    Aradottir, E. S.; Sonnenthal, E. L.; Bjornsson, G.; Jonsson, H.

    2011-12-01

    CO2 mineral sequestration in basalt may provide a long lasting, thermodynamically stable, and environmentally benign solution to reduce greenhouse gases in the atmosphere. Multi-dimensional, field scale, reactive transport models of this process have been developed with a focus on the CarbFix pilot CO2 injection in Iceland. An extensive natural analog literature review was conducted in order to identify the primary and secondary minerals associated with water-basalt interaction at low and elevated CO2 conditions. Based on these findings, an internally consistent thermodynamic database describing the mineral reactions of interest was developed and validated. Hydrological properties of field scale mass transport models were properly defined by calibration to field data using iTOUGH2. Reactive chemistry was coupled to the models and TOUGHREACT used for running predictive simulations carried out with the objective of optimizing long-term management of injection sites, to quantify the amount of CO2 that can be mineralized, and to identify secondary minerals that compete with carbonates for cations leached from the primary rock. Calibration of field data from the CarbFix reservoir resulted in a horizontal permeability for lava flows of 300 mD and a vertical permeability of 1700 mD. Active matrix porosity was estimated to be 8.5%. The CarbFix numerical models were a valuable engineering tool for designing optimal injection and production schemes aimed at increasing groundwater flow. Reactive transport simulations confirm dissolution of primary basaltic minerals as well as carbonate formation, and thus indicate in situ CO2 mineral sequestration in basalts to be a viable option. Furthermore, the simulations imply that clay minerals are most likely to compete with magnesite-siderite solid solutions for Mg and Fe leached from primary minerals, whereas zeolites compete with calcite for dissolved Ca. In the case of the CarbFix pilot injection, which involves a continuous injection of 1,100 tons CO2 in total for 6 months, the basalt hosted reservoir was estimated to have a 100% sequestering efficiency after 10 years. In the case of an upscaled 10 year long injection of 40,000 tons per year, sequestering efficiency of the same reservoir was estimated to be about 10% after 100 years. However, sequestering efficiency in the latter case has every potential of increasing substantially with time due to the vast amount of primary basaltic minerals in the reservoir.

  15. Measurement of carbon for carbon sequestration and site monitoring

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Martin, Madhavi Z; Wullschleger, Stan D; Garten Jr, Charles T

    A 2 to 6 degree C increase in global temperature by 2050 has been predicted due to the production of greenhouse gases that is directly linked to human activities. This has encouraged an increase in the international efforts on ways to reduce anthropogenic emissions of greenhouse gases particularly carbon dioxide (CO{sub 2}) as evidence for the link between atmospheric greenhouse gases and climate change has been established. Suggestion that soils and vegetation could be managed to increase their uptake and storage of CO{sub 2}, and thus become 'land carbon sinks' is an incentive for scientists to undertake the ability tomore » measure and quantify the carbon in soils and vegetation to establish base-line quantities present at this time. The verification of the permanence of these carbon sinks has raised some concern regarding the accuracy of their long-term existence. Out of the total percentage of carbon that is potentially sequestered in the terrestrial land mass, only 25% of that is sequestered above ground and almost 75% is hypothesized to be sequestered underground. Soil is composed of solids, liquids, and gases which is similar to a three-phase system. The gross chemical composition of soil organic carbon (SOC) consists of 65% humic substances that are amorphous, dark-colored, complex, polyelectrolyte-like materials that range in molecular weight from a few hundred to several thousand Daltons. The very complex structure of humic and fulvic acid makes it difficult to obtain a spectral signature for all soils in general. The humic acids of different soils have been observed to have polymeric structure, appearing as rings, chains and clusters as seen in electron microscope observations. The humification processes of the soils will decide the sizes of their macromolecules that range from 60-500 angstroms. The percentage of the humus that occurs in the light brown soils is much lower than the humus present in dark brown soils. The humus of forest soils is characterized by a high content of fulvic acids while the humus of peat and grassland soils is high in humic acids. Similarly it is well known that the amount of carbon present in forest soils is lower than the amount present in grassland soils.« less

  16. Will marine productivity wane?

    NASA Astrophysics Data System (ADS)

    Laufkötter, Charlotte; Gruber, Nicolas

    2018-03-01

    If marine algae are impaired severely by global climate change, the resulting reduction in marine primary production would strongly affect marine life and the ocean's biological pump that sequesters substantial amounts of atmospheric carbon dioxide in the ocean's interior. Most studies, including the latest generation of Earth system models, project only moderate global decreases in biological production until 2100 (1, 2), suggesting that these concerns are unwarranted. But on page 1139 of this issue, Moore et al. (3) show that this conclusion might be shortsighted and that there may be much larger long-term changes in ocean productivity than previously appreciated.

  17. Fermentation process for the production of organic acids

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hermann, Theron; Reinhardt, James; Yu, Xiaohui

    This invention relates to improvements in the fermentation process used in the production of organic acids from biological feedstock using bacterial catalysts. The improvements in the fermentation process involve providing a fermentation medium comprising an appropriate form of inorganic carbon, an appropriate amount of aeration and a biocatalyst with an enhanced ability to uptake and assimilate the inorganic carbon into the organic acids. This invention also provides, as a part of an integrated fermentation facility, a novel process for producing a solid source of inorganic carbon by sequestering carbon released from the fermentation in an alkali solution.

  18. Upscaling nitrogen-mycorrhizal effects to quantify CO2 fertilization.

    NASA Astrophysics Data System (ADS)

    Terrer, C.; Franklin, O.; Kaiser, C.; Vicca, S.; Stocker, B.; Prentice, I. C.; Soudzilovskaia, N.

    2016-12-01

    Terrestrial ecosystems sequester annually about a quarter of anthropogenic carbon dioxide (CO2) emissions. However, it has been proposed that nitrogen (N) availability will limit plants' capacity to absorb increasing quantities of CO2 in the atmosphere. Experiments in which plants are fumigated with elevated CO2 show contrasting results, leaving open the debate of whether the magnitude of the CO2 fertilization effect will be limited by N. By synthesizing data from CO2 experiments through meta-analysis, we found that the magnitude of the CO2 fertilization effect can be explained based on the interaction between N availability and type of mycorrhizal association. Indeed, N availability is the most important driver of the CO2 fertilization effect, however, plants that associate with ectomycorrhizal fungi can overcome N limitations and grow about 30% more under 650ppm than under 400ppm of atmospheric CO2. On the other hand, plants that associate with arbuscular mycorrhizal fungi show no CO2 fertilization effect under low N availability. Using this framework, we quantified biomass responses to CO2 as a function of the soil parameters that determine N availability for the two mycorrhizal types. Then, by overlaying the distribution of mycorrhizal plants with global projections of the soil parameters that determine N availability, we estimated the amount of extra CO2 that terrestrial plants can sequester in biomass for an increase in CO2, as well as the distribution of the CO2 fertilization effect. This synthesis reconciles contrasting views of the role of N in terrestrial carbon uptake and emphasizes the plant control on N availability through interaction with ectomycorrhizal fungi. Large-scale ecosystem models should account for the influence of nitrogen and mycorrhizae reported here, which will improve representation of the CO2 fertilization effect, critical for projecting ecosystem responses and feedbacks to climate change.

  19. Silviculture of forests in the Eastern United States

    Treesearch

    Daniel C. Dey; John C. Brissette; Callie J. Schweitzer; James M. Guldin

    2012-01-01

    The forests of the Eastern United States are diverse and provide many products and amenities for people living in the area and beyond. Eastern temperate forests play an important role in determining water yield and quality. They have the potential to sequester large quantities of carbon and influence air quality, and thus climate. Our standard of living is very much...

  20. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Malhotra, Vivak

    The USA is embarking upon tackling the serious environmental challenges posed to the world by greenhouse gases, especially carbon dioxide (CO2). The dimension of the problem is daunting. In fact, according to the Energy Information Agency, nearly 6 billion metric tons of CO2 were produced in the USA in 2007 with coal-burning power plants contributing about 2 billion metric tons. To mitigate the concerns associated with CO2 emission, geological sequestration holds promise. Among the potential geological storage sites, unmineable coal seams and shale formations in particular show promise because of the probability of methane recovery while sequestering the CO2. However.more » the success of large-scale sequestration of CO2 in coal and shale would hinge on a thorough understanding of CO2's interactions with host reservoirs. An important parameter for successful storage of CO2 reservoirs would be whether the pressurized CO2 would remain invariant in coal and shale formations under reasonable internal and/or external perturbations. Recent research has brought to the fore the potential of induced seismicity, which may result in caprock compromise. Therefore, to evaluate the potential risks involved in sequestering CO2 in Illinois bituminous coal seams and shale, we studied: (i) the mechanical behavior of Murphysboro (Illinois) and Houchin Creek (Illinois) coals, (ii) thermodynamic behavior of Illinois bituminous coal at - 100oC ≤ T ≤ 300oC, (iii) how high pressure CO2 (up to 20.7 MPa) modifies the viscosity of the host, (iv) the rate of emission of CO2 from Illinois bituminous coal and shale cores if the cores, which were pressurized with high pressure (≤ 20.7 MPa) CO2, were exposed to an atmospheric pressure, simulating the development of leakage pathways, (v) whether there are any fractions of CO2 stored in these hosts which are resistance to emission by simply exposing the cores to atmospheric pressure, and (vi) how compressive shockwaves applied to the coal and shale cores, which were pressurized with high pressure CO2, determine the fate of sequestered CO2 in these cores. Our results suggested that Illinois bituminous coal in its unperturbed state, i.e., when not pressurized with CO2, showed large variations in the mechanical properties. Modulus varied from 0.7 GPa to 3.4 GPa even though samples were extracted from a single large chunk of coal. We did not observe any glass transition for Illinois bituminous coal at - 100oC ≤ T ≤ 300oC, however, when the coal was pressurized with CO2 at ambient ≤ P ≤ 20.7 MPa, the viscosity of the coal decreased and inversely scaled with the CO2 pressure. The decrease in viscosity as a function of pressure could pose CO2 injection problems for coal as lower viscosity would allow the solid coal to flow to plug the fractures, fissures, and cleats. Our experiments also showed a very small fraction of CO2 was absorbed in coal; and when CO2 pressurized coals were exposed to atmospheric conditions, the loss of CO2 from coals was massive. Half of the sequestered gas from the coal cores was lost in less than 20 minutes. Our shockwave experiments on Illinois bituminous coal, New Albany shale (Illinois), Devonian shale (Ohio), and Utica shale (Ohio) presented clear evidence that the significant emission of the sequestered CO2 from these formations cannot be discounted during seismic activity, especially if caprock is compromised. It is argued that additional shockwave studies, both compressive and transverse, would be required for successfully mapping the risks associated with sequestering high pressure CO2 in coal and shale formations.« less

  1. In situ synthesis of gold nanoparticles in exponentially-growing layer-by-layer films

    PubMed Central

    Shen, Liyan; Rapenne, Laetitia; Chaudouet, Patrick; Ji, Jian; Picart, Catherine

    2014-01-01

    In situ synthesis of inorganic nanoparticles (NPs) in polyelectrolytes multilayers (PEMs) has recently gained much attention. Due to the versatility of their composition, PEMs offer a unique opportunity to synthesize a variety of NPs. So far, mostly cationic precursors have been used and only few studies have investigated the possibility of using amine groups to bind anionic precursors. Here, we use exponentially growing poly(L-lysine)/hyaluronan (PLL/HA) films as a nanoreservoir to bind and sequester aurochlorate (AuCl4−) anions thanks to the large number of free amine groups. The polypeptide-polysaccharide reactive template enabled the formation in a spatially-confined environment of gold NP at a very high yield. The synthesized gold NPs were homogenous and well-dispersed in the nanocomposite. Importantly, there was no particular effect of the film-ending layer (either PLL or HA). The largest particles of ~ 9 nm and the largest amount of gold were obtained at acidic pH of 3. When the pH was increased, smaller and more numerous NPs were synthesized but the total amount of gold was lower. Based on UV-visible spectrometry, FTIR and TEM data, we finally propose a scheme for the mechanism of gold NPs formation, in which several groups of PLL and HA contribute to the binding of gold ions, the nucleation and growth of NPs, and their stabilization in the “bulk” of the film. PMID:22981588

  2. Ion Homeostasis in Chloroplasts under Salinity and Mineral Deficiency 1

    PubMed Central

    Schröppel-Meier, Gabriele; Kaiser, Werner M.

    1988-01-01

    Spinach (Spinacia oleracea var “Yates”) plants in hydroponic culture were exposed to stepwise increased concentrations of NaCl or NaNO3 up to a final concentration of 300 millimoles per liter, at constant Ca2+-concentration. Leaf cell sap and extracts from aqueously isolated spinach chloroplasts were analyzed for mineral cations, anions, amino acids, sugars, and quarternary ammonium compounds. Total osmolality of leaf sap and photosynthetic capacity of leaves were also measured. For comparison, leaf sap from salt-treated pea plants was also analyzed. Spinach plants under NaCl or NaNO3 salinity took up large amounts of sodium (up to 400 millimoles per liter); nitrate as the accompanying anion was taken up less (up to 90 millimoles per liter) than chloride (up to 450 millimoles per liter). Under chloride salinity, nitrate content in leaves decreased drastically, but total amino acid concentrations remained constant. This response was much more pronounced (and occurred at lower salt concentrations) in leaves from the glycophyte (pea, Pisum sativum var “Kleine Rheinländerin”) than from moderately salt-tolerant spinach. In spinach, sodium chloride or nitrate taken up into leaves was largely sequestered in the vacuoles; both salts induced synthesis of quarternary ammonium compounds, which were accumulated mainly in chloroplasts (and cytosol). This prevented impairment of metabolism, as indicated by an unchanged photosynthetic capacity of leaves. PMID:16666232

  3. Colloid-facilitated mobilization of metals by freeze-thaw cycles.

    PubMed

    Mohanty, Sanjay K; Saiers, James E; Ryan, Joseph N

    2014-01-21

    The potential of freeze-thaw cycles to release colloids and colloid-associated contaminants into water is unknown. We examined the effect of freeze-thaw cycles on the mobilization of cesium and strontium in association with colloids in intact cores of a fractured soil, where preferential flow paths are prevalent. Two intact cores were contaminated with cesium and strontium. To mobilize colloids and metal cations sequestered in the soil cores, each core was subjected to 10 intermittent wetting events separated by 66 h pauses. During the first five pauses, the cores were dried at room temperature, and during last five pauses, the cores were subjected to 42 h of freezing followed by 24 h of thawing. In comparison to drying, freeze-thaw cycles created additional preferential flow paths through which colloids, cesium, and strontium were mobilized. The wetting events following freeze-thaw intervals mobilized about twice as many colloids as wetting events following drying at room temperature. Successive wetting events following 66 h of drying mobilized similar amounts of colloids; in contrast, successive wetting events after 66 h of freeze-thaw intervals mobilized greater amounts of colloids than the previous one. Drying and freeze-thaw treatments, respectively, increased and decreased the dissolved cesium and strontium, but both treatments increased the colloidal cesium and strontium. Overall, the freeze-thaw cycles increased the mobilization of metal contaminants primarily in association with colloids through preferential flow paths. These findings suggest that the mobilization of colloid and colloid-associated contaminants could increase when temperature variations occur around the freezing point of water. Thus, climate extremes have the potential to mobilize contaminants that have been sequestered in the vadose zone for decades.

  4. Carbon and nitrogen distribution in oak-hickory forests distributed along a productivity gradient

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Reber, R.T.; Kaczmarek, D.J.; Pope, P.E.

    1993-12-31

    Biomass, carbon and nitrogen pools were determined for oak-hickory forests of varying productivity. Little information of this type is available for the central hardwood region. Six oak-hickory dominated forests were chosen to represent a range in potential site productivity as influenced by soil type, amount of recyclable nutrients and available water. Biomass, carbon and nitrogen storage were determined for the following components: above ground standing biomass, fine root biomass, forest floor organic layers and litterfall. As site sequestered at each site was dependent more on the amount of living biomass at each site Litterfall, to some extent, increased with increasingmore » site productivity. As potential site productivity decreased, total fine root biomass increased. The data suggest that as site quality decreased fine root production and turnover may become as important in nutrient cycling as annual litterfall.« less

  5. Non-Reductive Strategies for U Sequestration: Natural Analogues and Practical Application

    NASA Astrophysics Data System (ADS)

    Maher, K.; Bethke, C. M.; Massey, M. S.

    2011-12-01

    A number of strategies have been proposed for the in situ remediation of U contaminated zones, including bioreduction, permeable reactive barriers, and incorporation into secondary phases such as phosphates. An alternative approach is to sequester U within amorphous Si phases such as opaline silica. We have investigated the isotopic and major element composition and structure of naturally occurring U-rich opaline silica in semi-arid soil environments across the western United States. These phases constitute a large natural reservoir of sequestered U. By combining these observations with geochemical considerations, we propose a remedial strategy for sequestering U in amorphous silica. The U-rich opal occurs as laminations, veins, and coatings on clasts in soils developed on a range of parent materials. U-rich opal deposits are also found as speleothems in caves, as silica-rich spring deposits, and as cavity fillings and hydrothermal veins in volcanic tuffs. Measurements of U, Th and Pb isotopes reveal the age of the opaline silica, demonstrating the long-term stability of U sequestration in open chemical environments. The isotopic data also suggest that opaline silica will retain the majority of the initial U over millions of years. U in naturally occurring opal generally ranges between 200 to 1000 ppm. In contrast, co-existing calcite contains less than 100 ppb U. From pore water chemistry, the distribution coefficient for U incorporation into opaline silica is approximately 20, whereas the coefficient for calcite is typically between 0.2 and 1. X-ray absorption spectroscopy investigations confirm that hexavalent U is incorporated in amorphous silica as the UO22+ ion. Coexisting Fe-oxides provide a further sink for sequestering UO22+ from the pore water. However, preliminary calculations suggest that incorporation of U into amorphous silica may be a dominant mechanism for isolating UO22+from groundwater over long time scales. Nature's mechanism for sequestering UO22+ from the environment might be profitably incorporated into groundwater remediation strategies. We consider a remedial strategy in which Na2SiO3 is amended into the subsurface. The silicate flood reacts with the surface acidity in the sediments to lower pH and precipitate amorphous silica. Hexavalent uranium is partitioned strongly into the silica, as well as complexed with the sediment surfaces.

  6. Reforestation can sequester two petagrams of carbon in US topsoils in a century

    Treesearch

    Lucas E. Nave; Grant M. Domke; Kathryn L. Hofmeister; Umakant Mishra; Charles H. Perry; Brian F. Walters; Christopher W. Swanston

    2018-01-01

    Soils are Earth’s largest terrestrial carbon (C) pool, and their responsiveness to land use and management make them appealing targets for strategies to enhance C sequestration. Numerous studies have identified practices that increase soil C, but their inferences are often based on limited data extrapolated over large areas. Here, we combine 15,000 observations from...

  7. Evaluation of Populus and Salix continuously irrigated with landfill leachate I. Genotype-specific elemental phytoremediation

    Treesearch

    Ronald S., Jr. Zalesny; Edmund O. Bauer

    2007-01-01

    There is a need for the identification and selection of specific tree genotypes that can sequester elements from contaminated soils, with elevated rates of uptake. We irrigated Populus (DN17, DN182, DN34, NM2, NM6) and Salix (94003, 94012, S287, S566, SX61) genotypes planted in large soil-filled containers with landfill leachate or...

  8. Net ecosystem carbon exchange of a dry temperate eucalypt forest

    NASA Astrophysics Data System (ADS)

    Hinko-Najera, Nina; Isaac, Peter; Beringer, Jason; van Gorsel, Eva; Ewenz, Cacilia; McHugh, Ian; Exbrayat, Jean-François; Livesley, Stephen J.; Arndt, Stefan K.

    2017-08-01

    Forest ecosystems play a crucial role in the global carbon cycle by sequestering a considerable fraction of anthropogenic CO2, thereby contributing to climate change mitigation. However, there is a gap in our understanding about the carbon dynamics of eucalypt (broadleaf evergreen) forests in temperate climates, which might differ from temperate evergreen coniferous or deciduous broadleaved forests given their fundamental differences in physiology, phenology and growth dynamics. To address this gap we undertook a 3-year study (2010-2012) of eddy covariance measurements in a dry temperate eucalypt forest in southeastern Australia. We determined the annual net carbon balance and investigated the temporal (seasonal and inter-annual) variability in and environmental controls of net ecosystem carbon exchange (NEE), gross primary productivity (GPP) and ecosystem respiration (ER). The forest was a large and constant carbon sink throughout the study period, even in winter, with an overall mean NEE of -1234 ± 109 (SE) g C m-2 yr-1. Estimated annual ER was similar for 2010 and 2011 but decreased in 2012 ranging from 1603 to 1346 g C m-2 yr-1, whereas GPP showed no significant inter-annual variability, with a mean annual estimate of 2728 ± 39 g C m-2 yr-1. All ecosystem carbon fluxes had a pronounced seasonality, with GPP being greatest during spring and summer and ER being highest during summer, whereas peaks in NEE occurred in early spring and again in summer. High NEE in spring was likely caused by a delayed increase in ER due to low temperatures. A strong seasonal pattern in environmental controls of daytime and night-time NEE was revealed. Daytime NEE was equally explained by incoming solar radiation and air temperature, whereas air temperature was the main environmental driver of night-time NEE. The forest experienced unusual above-average annual rainfall during the first 2 years of this 3-year period so that soil water content remained relatively high and the forest was not water limited. Our results show the potential of temperate eucalypt forests to sequester large amounts of carbon when not water limited. However, further studies using bottom-up approaches are needed to validate measurements from the eddy covariance flux tower and to account for a possible underestimation in ER due to advection fluxes.

  9. Modeling the influence of coupled mass transfer processes on mass flux downgradient of heterogeneous DNAPL source zones

    NASA Astrophysics Data System (ADS)

    Yang, Lurong; Wang, Xinyu; Mendoza-Sanchez, Itza; Abriola, Linda M.

    2018-04-01

    Sequestered mass in low permeability zones has been increasingly recognized as an important source of organic chemical contamination that acts to sustain downgradient plume concentrations above regulated levels. However, few modeling studies have investigated the influence of this sequestered mass and associated (coupled) mass transfer processes on plume persistence in complex dense nonaqueous phase liquid (DNAPL) source zones. This paper employs a multiphase flow and transport simulator (a modified version of the modular transport simulator MT3DMS) to explore the two- and three-dimensional evolution of source zone mass distribution and near-source plume persistence for two ensembles of highly heterogeneous DNAPL source zone realizations. Simulations reveal the strong influence of subsurface heterogeneity on the complexity of DNAPL and sequestered (immobile/sorbed) mass distribution. Small zones of entrapped DNAPL are shown to serve as a persistent source of low concentration plumes, difficult to distinguish from other (sorbed and immobile dissolved) sequestered mass sources. Results suggest that the presence of DNAPL tends to control plume longevity in the near-source area; for the examined scenarios, a substantial fraction (43.3-99.2%) of plume life was sustained by DNAPL dissolution processes. The presence of sorptive media and the extent of sorption non-ideality are shown to greatly affect predictions of near-source plume persistence following DNAPL depletion, with plume persistence varying one to two orders of magnitude with the selected sorption model. Results demonstrate the importance of sorption-controlled back diffusion from low permeability zones and reveal the importance of selecting the appropriate sorption model for accurate prediction of plume longevity. Large discrepancies for both DNAPL depletion time and plume longevity were observed between 2-D and 3-D model simulations. Differences between 2- and 3-D predictions increased in the presence of sorption, especially for the case of non-ideal sorption, demonstrating the limitations of employing 2-D predictions for field-scale modeling.

  10. The effects of snow and salt on ice table stability in University Valley, Antarctica

    USGS Publications Warehouse

    Williams, Kaj; Heldmann, Jennifer L.; McKay, Christopher P.; Mellon, Michael T.

    2018-01-01

    The Antarctic Dry Valleys represent a unique environment where it is possible to study dry permafrost overlaying an ice-rich permafrost. In this paper, two opposing mechanisms for ice table stability in University Valley are addressed: i) diffusive recharge via thin seasonal snow deposits and ii) desiccation via salt deposits in the upper soil column. A high-resolution time-marching soil and snow model was constructed and applied to University Valley, driven by meteorological station atmospheric measurements. It was found that periodic thin surficial snow deposits (observed in University Valley) are capable of drastically slowing (if not completely eliminating) the underlying ice table ablation. The effects of NaCl, CaCl2 and perchlorate deposits were then modelled. Unlike the snow cover, however, the presence of salt in the soil surface (but no periodic snow) results in a slight increase in the ice table recession rate, due to the hygroscopic effects of salt sequestering vapour from the ice table below. Near-surface pore ice frequently forms when large amounts of salt are present in the soil due to the suppression of the saturation vapour pressure. Implications for Mars high latitudes are discussed.

  11. Substantial global carbon uptake by cement carbonation

    NASA Astrophysics Data System (ADS)

    Xi, Fengming; Davis, Steven J.; Ciais, Philippe; Crawford-Brown, Douglas; Guan, Dabo; Pade, Claus; Shi, Tiemao; Syddall, Mark; Lv, Jie; Ji, Lanzhu; Bing, Longfei; Wang, Jiaoyue; Wei, Wei; Yang, Keun-Hyeok; Lagerblad, Björn; Galan, Isabel; Andrade, Carmen; Zhang, Ying; Liu, Zhu

    2016-12-01

    Calcination of carbonate rocks during the manufacture of cement produced 5% of global CO2 emissions from all industrial process and fossil-fuel combustion in 2013. Considerable attention has been paid to quantifying these industrial process emissions from cement production, but the natural reversal of the process--carbonation--has received little attention in carbon cycle studies. Here, we use new and existing data on cement materials during cement service life, demolition, and secondary use of concrete waste to estimate regional and global CO2 uptake between 1930 and 2013 using an analytical model describing carbonation chemistry. We find that carbonation of cement materials over their life cycle represents a large and growing net sink of CO2, increasing from 0.10 GtC yr-1 in 1998 to 0.25 GtC yr-1 in 2013. In total, we estimate that a cumulative amount of 4.5 GtC has been sequestered in carbonating cement materials from 1930 to 2013, offsetting 43% of the CO2 emissions from production of cement over the same period, not including emissions associated with fossil use during cement production. We conclude that carbonation of cement products represents a substantial carbon sink that is not currently considered in emissions inventories.

  12. Non-volcanic CO2 Earth degassing: Case of Mefite d'Ansanto (southern Apennines), Italy

    NASA Astrophysics Data System (ADS)

    Chiodini, G.; Granieri, D.; Avino, R.; Caliro, S.; Costa, A.; Minopoli, C.; Vilardo, G.

    2010-06-01

    Mefite d'Ansanto, southern Apennines, Italy is the largest natural emission of low temperature CO2 rich gases, from non-volcanic environment, ever measured in the Earth. The emission is fed by a buried reservoir, made up of permeable limestones and covered by clayey sediments. We estimated a total gas flux of ˜2000 tons per day. Under low wind conditions, the gas flows along a narrow natural channel producing a persistent gas river which has killed over a period of time people and animals. The application of a physical numerical model allowed us to define the zones which potentially can be affected by dangerous CO2 concentration at breathing height for humans. The geometry of the Mefite gas reservoir is similar to those designed for sequestering CO2 in geological storage projects where huge amounts of CO2 should be injected in order to reduce atmospheric CO2 concentration. The approach which we have used at Mefite to define hazardous zones for the human health can be applied also in case of large CO2 leakages from storage sites, a phenomena which, even if improbable, can not be ruled out.

  13. The origin of volatiles in the Earth's mantle

    NASA Astrophysics Data System (ADS)

    Hier-Majumder, Saswata; Hirschmann, Marc M.

    2017-08-01

    The Earth's deep interior contains significant reservoirs of volatiles such as H, C, and N. Due to the incompatible nature of these volatile species, it has been difficult to reconcile their storage in the residual mantle immediately following crystallization of the terrestrial magma ocean (MO). As the magma ocean freezes, it is commonly assumed that very small amounts of melt are retained in the residual mantle, limiting the trapped volatile concentration in the primordial mantle. In this article, we show that inefficient melt drainage out of the freezing front can retain large amounts of volatiles hosted in the trapped melt in the residual mantle while creating a thick early atmosphere. Using a two-phase flow model, we demonstrate that compaction within the moving freezing front is inefficient over time scales characteristic of magma ocean solidification. We employ a scaling relation between the trapped melt fraction, the rate of compaction, and the rate of freezing in our magma ocean evolution model. For cosmochemically plausible fractions of volatiles delivered during the later stages of accretion, our calculations suggest that up to 77% of total H2O and 12% of CO2 could have been trapped in the mantle during magma ocean crystallization. The assumption of a constant trapped melt fraction underestimates the mass of volatiles in the residual mantle by more than an order of magnitude.Plain Language SummaryThe Earth's deep interior contains substantial amounts of volatile elements like C, H, and N. How these elements got sequestered in the Earth's interior has long been a topic of debate. It is generally assumed that most of these elements escaped the interior of the Earth during the first few hundred thousand years to create a primitive atmosphere, leaving the mantle reservoir nearly empty. In this work, we show that the key to this paradox involves the very early stages of crystallization of the mantle from a global magma ocean. Using numerical models, we show that the mantle stored substantially higher amounts of volatiles than previously thought, thanks to large quantities of melt trapped in the mantle due to rapid freezing of the magma ocean. Our models show that up to 77% of the total planetary budget of water and 12% of CO2 can be stored in the mantle due to this previously unaccounted process.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/928561','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/928561"><span>Geological Sequestration of CO2 by Hydrous Carbonate Formation with Reclaimed Slag</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Von L. Richards; Kent Peaslee; Jeffrey Smith</p> <p></p> <p>The concept of this project is to develop a process that improves the kinetics of the hydrous carbonate formation reaction enabling steelmakers to directly remove CO2 from their furnace exhaust gas. It is proposed to bring the furnace exhaust stream containing CO2 in contact with reclaimed steelmaking slag in a reactor that has an environment near the unit activity of water resulting in the production of carbonates. The CO2 emissions from the plant would be reduced by the amount sequestered in the formation of carbonates. The main raw materials for the process are furnace exhaust gases and specially prepared slag.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29870965','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29870965"><span>Energy efficiency and reduction of CO2 emissions from campsites management in a protected area.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Del Moretto, Deny; Branca, Teresa Annunziata; Colla, Valentina</p> <p>2018-09-15</p> <p>Campsites can be a pollution source, mainly due to the energy consumption. In addition, the green areas, thanks to the direct CO 2 sequestration and the shading, indirectly prevent the CO 2 emissions related to energy consumption. The methodology presented in this paper allowed assessing the annual CO 2 emissions directly related to the campsite management and the consequent environmental impact in campsite clusters in Tuscany. The software i-Tree Canopy was exploited, enabling to evaluate in terms of "canopy" the tonnes of CO 2 sequestered by the vegetation within each campsite. Energy and water consumptions from 2012 to 2015 were assessed for each campsite. As far as the distribution of sequestered CO 2 is concerned, the campsites ranking was in accordance to their size. According to the indicator "T-Tree" or canopy cover, a larger area of the canopy cover allows using less outdoor areas covered by trees for the sequestration of the remaining amount of pollutants. The analysis shows that the considered campsites, that are located in a highly naturalistic Park, present significant positive aspects both in terms of CO 2 emission reductions and of energy efficiency. However, significant margins of improvement are also possible and they were analysed in the paper. Copyright © 2018 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70189891','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70189891"><span>Formation of mercury sulfide from Hg(II)−thiolate complexes in natural organic matter</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Alain Manceau,; Cyprien Lemouchi,; Mironel Enescu,; Anne-Claire Gaillot,; Martine Lanson,; Valerie Magnin,; Pieter Glatzel,; Poulin, Brett; Ryan, Joseph N.; Aiken, George R.; Isabelle Gautier-Lunea,; Kathryn L. Nagy,</p> <p>2015-01-01</p> <p>Methylmercury is the environmental form of neurotoxic mercury that is biomagnified in the food chain. Methylation rates are reduced when the metal is sequestered in crystalline mercury sulfides or bound to thiol groups in macromolecular natural organic matter. Mercury sulfide minerals are known to nucleate in anoxic zones, by reaction of the thiol-bound mercury with biogenic sulfide, but not in oxic environments. We present experimental evidence that mercury sulfide forms from thiol-bound mercury alone in aqueous dark systems in contact with air. The maximum amount of nanoparticulate mercury sulfide relative to thiol-bound mercury obtained by reacting dissolved mercury and soil organic matter matches that detected in the organic horizon of a contaminated soil situated downstream from Oak Ridge, TN, in the United States. The nearly identical ratios of the two forms of mercury in field and experimental systems suggest a common reaction mechanism for nucleating the mineral. We identified a chemical reaction mechanism that is thermodynamically favorable in which thiol-bound mercury polymerizes to mercury–sulfur clusters. The clusters form by elimination of sulfur from the thiol complexes via breaking of mercury–sulfur bonds as in an alkylation reaction. Addition of sulfide is not required. This nucleation mechanism provides one explanation for how mercury may be immobilized, and eventually sequestered, in oxygenated surface environments.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://hdl.handle.net/2060/20150002834','NASA-TRS'); return false;" href="http://hdl.handle.net/2060/20150002834"><span>Halite as a Methane Sequestration Host: A Possible Explanation for Periodic Methane Release on Mars, and a Surface-accessible Source of Ancient Martian Carbon</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://ntrs.nasa.gov/search.jsp">NASA Technical Reports Server (NTRS)</a></p> <p>Fries, M. D.; Steele, Andrew; Hynek, B. M.</p> <p>2015-01-01</p> <p>We present the hypothesis that halite may play a role in methane sequestration on the martian surface. In terrestrial examples, halite deposits sequester large volumes of methane and chloromethane. Also, examples of chloromethane-bearing, approximately 4.5 Ga old halite from the Monahans meteorite show that this system is very stable unless the halite is damaged. On Mars, methane may be generated from carbonaceous material trapped in ancient halite deposits and sequestered. The methane may be released by damaging its halite host; either by aqueous alteration, aeolian abrasion, heating, or impact shock. Such a scenario may help to explain the appearance of short-lived releases of methane on the martian surface. The methane may be of either biogenic or abiogenic origin. If this scenario plays a significant role on Mars, then martian halite deposits may contain samples of organic compounds dating to the ancient desiccation of the planet, accessible at the surface for future sample return missions.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4389604','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4389604"><span>Na+/K+-ATPase resistance and cardenolide sequestration: basal adaptations to host plant toxins in the milkweed bugs (Hemiptera: Lygaeidae: Lygaeinae)</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Bramer, Christiane; Dobler, Susanne; Deckert, Jürgen; Stemmer, Michael; Petschenka, Georg</p> <p>2015-01-01</p> <p>Despite sequestration of toxins being a common coevolutionary response to plant defence in phytophagous insects, the macroevolution of the traits involved is largely unaddressed. Using a phylogenetic approach comprising species from four continents, we analysed the ability to sequester toxic cardenolides in the hemipteran subfamily Lygaeinae, which is widely associated with cardenolide-producing Apocynaceae. In addition, we analysed cardenolide resistance of their Na+/K+-ATPases, the molecular target of cardenolides. Our data indicate that cardenolide sequestration and cardenolide-resistant Na+/K+-ATPase are basal adaptations in the Lygaeinae. In two species that shifted to non-apocynaceous hosts, the ability to sequester was secondarily reduced, yet Na+/K+-ATPase resistance was maintained. We suggest that both traits evolved together and represent major coevolutionary adaptations responsible for the evolutionary success of lygaeine bugs. Moreover, specialization on cardenolides was not an evolutionary dead end, but enabled this insect lineage to host shift to cardenolide-producing plants from distantly related families. PMID:25808891</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2006PNAS..103.9903C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2006PNAS..103.9903C"><span>Melanosomal sequestration of cytotoxic drugs contributes to the intractability of malignant melanomas</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Chen, Kevin G.; Valencia, Julio C.; Lai, Barry; Zhang, Guofeng; Paterson, Jill K.; Rouzaud, François; Berens, Werner; Wincovitch, Stephen M.; Garfield, Susan H.; Leapman, Richard D.; Hearing, Vincent J.; Gottesman, Michael M.</p> <p>2006-06-01</p> <p>Multidrug resistance mechanisms underlying the intractability of malignant melanomas remain largely unknown. In this study, we demonstrate that the development of multidrug resistance in melanomas involves subcellular sequestration of intracellular cytotoxic drugs such as cis-diaminedichloroplatinum II (cisplatin; CDDP). CDDP is initially sequestered in subcellular organelles such as melanosomes, which significantly reduces its nuclear localization when compared with nonmelanoma/KB-3-1 epidermoid carcinoma cells. The melanosomal accumulation of CDDP remarkably modulates melanogenesis through a pronounced increase in tyrosinase activity. The altered melanogenesis manifested an 8-fold increase in both intracellular pigmentation and extracellular transport of melanosomes containing CDDP. Thus, our experiments provide evidence that melanosomes contribute to the refractory properties of melanoma cells by sequestering cytotoxic drugs and increasing melanosome-mediated drug export. Preventing melanosomal sequestration of cytotoxic drugs by inhibiting the functions of melanosomes may have great potential as an approach to improving the chemosensitivity of melanoma cells. cancer | melanosomes | skin | tumor therapy | multidrug resistance</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/21304940','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/21304940"><span>Entrapment of viral capsids in nuclear PML cages is an intrinsic antiviral host defense against varicella-zoster virus.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Reichelt, Mike; Wang, Li; Sommer, Marvin; Perrino, John; Nour, Adel M; Sen, Nandini; Baiker, Armin; Zerboni, Leigh; Arvin, Ann M</p> <p>2011-02-03</p> <p>The herpesviruses, like most other DNA viruses, replicate in the host cell nucleus. Subnuclear domains known as promyelocytic leukemia protein nuclear bodies (PML-NBs), or ND10 bodies, have been implicated in restricting early herpesviral gene expression. These viruses have evolved countermeasures to disperse PML-NBs, as shown in cells infected in vitro, but information about the fate of PML-NBs and their functions in herpesvirus infected cells in vivo is limited. Varicella-zoster virus (VZV) is an alphaherpesvirus with tropism for skin, lymphocytes and sensory ganglia, where it establishes latency. Here, we identify large PML-NBs that sequester newly assembled nucleocapsids (NC) in neurons and satellite cells of human dorsal root ganglia (DRG) and skin cells infected with VZV in vivo. Quantitative immuno-electron microscopy revealed that these distinctive nuclear bodies consisted of PML fibers forming spherical cages that enclosed mature and immature VZV NCs. Of six PML isoforms, only PML IV promoted the sequestration of NCs. PML IV significantly inhibited viral infection and interacted with the ORF23 capsid surface protein, which was identified as a target for PML-mediated NC sequestration. The unique PML IV C-terminal domain was required for both capsid entrapment and antiviral activity. Similar large PML-NBs, termed clastosomes, sequester aberrant polyglutamine (polyQ) proteins, such as Huntingtin (Htt), in several neurodegenerative disorders. We found that PML IV cages co-sequester HttQ72 and ORF23 protein in VZV infected cells. Our data show that PML cages contribute to the intrinsic antiviral defense by sensing and entrapping VZV nucleocapsids, thereby preventing their nuclear egress and inhibiting formation of infectious virus particles. The efficient sequestration of virion capsids in PML cages appears to be the outcome of a basic cytoprotective function of this distinctive category of PML-NBs in sensing and safely containing nuclear aggregates of aberrant proteins.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_5");'>5</a></li> <li><a href="#" onclick='return showDiv("page_6");'>6</a></li> <li class="active"><span>7</span></li> <li><a href="#" onclick='return showDiv("page_8");'>8</a></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_7 --> <div id="page_8" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_6");'>6</a></li> <li><a href="#" onclick='return showDiv("page_7");'>7</a></li> <li class="active"><span>8</span></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="141"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/983785','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/983785"><span>Comments on Economides and Ehlig-Economides,"Sequestering carbon dioxide in a closed underground volume," SPE 124430, October 2009</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Oldenburg, Curt; Pruess, Karsten; Birkholzer, Jens</p> <p></p> <p>The paper examines the pressure increase resulting from injection of CO2 into a 1D radial system with closed boundaries. The finding is that unacceptably high pressures are obtained when only 1% or less of the pore volume is occupied by injected CO2. These results are used to make the general conclusion that large-scale CCS is not feasible.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.dtic.mil/docs/citations/ADA472056','DTIC-ST'); return false;" href="http://www.dtic.mil/docs/citations/ADA472056"><span>The Potential for Carbon Sequestration in the United States</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.dtic.mil/">DTIC Science & Technology</a></p> <p></p> <p>2007-09-01</p> <p>Potential of U.S. Cropland to Sequester Carbon and Mitigate the Greenhouse Effect (Ann Arbor, Mich.: Ann Arbor Press, 1998), pp. 18–21; R.F. Follett and...others, The Potential of U.S. Grazing Land to Sequester Carbon and Mitigate the Greenhouse Effect (Boca Raton, Fla.: CRC Press, 2001), pp. 401–430... the Greenhouse Effect , pp. 18–21; R. Lal and others, “Managing U.S. Cropland to Sequester Carbon in Soil,” Journal of Soil and Water Conservation</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/22504551-treatment-reuse-wastewaters-discharged-petroleum-industries-hmd-algeria','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/22504551-treatment-reuse-wastewaters-discharged-petroleum-industries-hmd-algeria"><span>Treatment and Reuse of Wastewaters Discharged by Petroleum Industries (HMD/Algeria)</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Sellami, MH, E-mail: sellami2000dz@gmail.com; Loudiyi, K; Boubaker, MC</p> <p></p> <p>Industrial wastewaters discharged by petroleum industries contains: oil, heavy metals and chemicals used in the process of oil separation and treatment. These waters are a source of soil, water and air pollution, and lead a mortal danger to the ecosystem. Our aim in this work has an aspect that can contribute to the collective effort to address the enormous amount of water purges storage bins and reuse them to avoid any environmental damage. This was achieved by chemical treating of these wastewaters discharged from three different locations of Hassi Messaoud (HMD) petroleum field by flocculation with (C-5563) followed by coagulationmore » with (C-2061) using two different acids as sequestering namely: Ascorbic and Citric acid. After experiments, the results showed that the wastewater can be treated without sequestering by adding 40 ppm of activated silicates. The best result was obtained by addition of 160 ppm of Ascorbic acid as sequestering agent and 20 ppm of activated silicates; resulting in removal of 92.81 % of suspended matter and 95.53 % of turbidity. Finally we concluded that this wastewater was satisfactorily treated and we recommend either inject it for enhanced oil recovery in industrial closest field (North field) to maintain the reservoir pressure and the improved rate recovery of oil reserves or reuse it in garden irrigation. In order to see the impact of the treated water on plants, irrigation tests have conducted on two types of plants (date palm and shaft apocalyptic) for one year. The tests showed that the thick layer of 5 cm and 0.08mm of particles diameter of dune sand removes most of remaining oil. The sand layer that fills the basin surrounding the shaft is removed and replaced every 06 months. So, Dune sand plays the role of natural filter. The garden plants appear and grow normally.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/15789030','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/15789030"><span>Large-scale database searching using tandem mass spectra: looking up the answer in the back of the book.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Sadygov, Rovshan G; Cociorva, Daniel; Yates, John R</p> <p>2004-12-01</p> <p>Database searching is an essential element of large-scale proteomics. Because these methods are widely used, it is important to understand the rationale of the algorithms. Most algorithms are based on concepts first developed in SEQUEST and PeptideSearch. Four basic approaches are used to determine a match between a spectrum and sequence: descriptive, interpretative, stochastic and probability-based matching. We review the basic concepts used by most search algorithms, the computational modeling of peptide identification and current challenges and limitations of this approach for protein identification.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2018ECSS..202..134J','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2018ECSS..202..134J"><span>Influence of seasonal variation and anthropogenic activity on phosphorus cycling and retention in mangrove sediments: A case study in China</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Jiang, Shan; Lu, Haoliang; Liu, Jingchun; Lin, Yushan; Dai, Minyue; Yan, Chongling</p> <p>2018-03-01</p> <p>Mangroves are known for sequestering and storing large quantities of phosphorus (P) within their sediments. In the present study, the sediment P cycle (including phosphatase activity intensity, total sedimentary P, P fractions distinguished by a sequential extraction method, as well as diffusion-adsorption processes) in a mangrove swamp in a subtropical estuary in China was studied. In the spring, the acid phosphatase activity varied between 1.3 and 1.9 units in the four sites in the estuary. The activity of alkaline phosphatase varied from 0.8 to 1.4 units. The total sedimentary P ranged from 821 to 1689 mg kg-1 with a dominance of redox-sensitive (Fe/Al bound) P. In the autumn, activities of both phosphatases and the total sediment P amount increased, probably due to enhanced inputs of organic matter and Fe oxides. In addition to seasonal variation, P in the mangrove sediment was influenced by anthropogenic activities. In particular, redox-sensitive P decreased significantly while phosphatase activity increased in the site that was flushed with aquaculture pond effluents. In contrast, sediment P enrichment was observed in the site that received domestic sewage. Both sources of anthropogenic P increased the eutrophication risk of the mangrove sediment because of a decrease in the amount of P adsorption and an enhancement of P release via diffusion. Diesel contamination due to the presence of a dock depressed phosphatase activity in the surficial sediment. The overlap between seasonal rhythm and human influences may introduce significant variations in P cycling, which warrants further attention from coastal management.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5347598','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5347598"><span>Role of degassing of the Noril’sk nickel deposits in the Permian–Triassic mass extinction event</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Barnes, Stephen J.; Mungall, James E.</p> <p>2017-01-01</p> <p>The largest mass extinction event in Earth's history marks the boundary between the Permian and Triassic Periods at circa 252 Ma and has been linked with the eruption of the basaltic Siberian Traps large igneous province (SLIP). One of the kill mechanisms that has been suggested is a biogenic methane burst triggered by the release of vast amounts of nickel into the atmosphere. A proposed Ni source lies within the huge Noril’sk nickel ore deposits, which formed in magmatic conduits widely believed to have fed the eruption of the SLIP basalts. However, nickel is a nonvolatile element, assumed to be largely sequestered at depth in dense sulfide liquids that formed the orebodies, preventing its release into the atmosphere and oceans. Flotation of sulfide liquid droplets by surface attachment to gas bubbles has been suggested as a mechanism to overcome this problem and allow introduction of Ni into the atmosphere during eruption of the SLIP lavas. Here we use 2D and 3D X-ray imagery on Noril’sk nickel sulfide, combined with simple thermodynamic models, to show that the Noril’sk ores were degassing while they were forming. Consequent “bubble riding” by sulfide droplets, followed by degassing of the shallow, sulfide-saturated, and exceptionally volatile and Cl-rich SLIP lavas, permitted a massive release of nickel-rich volcanic gas and subsequent global dispersal of nickel released from this gas as aerosol particles. PMID:28223492</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70184406','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70184406"><span>Multi-year persistence of oil mousse on high energy beaches distant from the Exxon Valdez spill origin</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Irvine, Gail V.; Mann, Daniel H.; Short, Jeffrey W.</p> <p>1999-01-01</p> <p>For at least 5 yr after the Exxon Valdez spill, relatively unweathered oil mousse has persisted on the exposed rocky shores of Shelikof Strait 500 km from Prince William Sound, Alaska. Previously it was thought that oil would be rapidly removed from such geomorphic settings by wave action. Oil mousse persists at sites in Katmai National Park and Preserve (NP&P) where it was stranded high in the intertidal zone under a lag of large boulders. These boulders armor the beach, preventing waves from disturbing the substrate and its included oil. Weathering of this stranded mousse has been slight – mousse sampled in 1989, 1992 and 1994 show negligible changes in polynuclear aromatic hydrocarbons compared to 11-day old Exxon Valdez crude. The preservation of this oil is due to its transport as mousse boli whose interiors largely escape weathering, followed by its sheltering in the interstices of boulder-armored beaches. The transport of mousse may allow for the long distance dispersal of less weathered, and hence still toxic oil. Our findings suggest that the low ecological sensitivity ratings previously applied to exposed, rocky shorelines need to be modified. The biological threat posed by oil stranded on the Katmai NP&P coast probably is slight because of its small amount and sequestered state. However, it still possesses the ability to be chemically toxic and could be released through disturbance of the armoring boulders by unusually high wave events.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015BGD....1217393M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015BGD....1217393M"><span>Water level, vegetation composition and plant productivity explain greenhouse gas fluxes in temperate cutover fens after inundation</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Minke, M.; Augustin, J.; Burlo, A.; Yarmashuk, T.; Chuvashova, H.; Thiele, A.; Freibauer, A.; Tikhonov, V.; Hoffmann, M.</p> <p>2015-10-01</p> <p>Rewetting of temperate continental cutover peatlands generally implies the creation of flooded areas, which are - dependent on water depth - colonized by helophytes such as Eriophorum angustifolium, Carex spp., Typha latifolia or Phragmites australis. Reeds of Typha and Phragmites are reported to be large sources of methane, but data on net CO2 uptake are contradictory for Typha and rare for Phragmites. This paper describes the effect of vegetation, water level and nutrient conditions on greenhouse gas (GHG) emissions for representative vegetation types along water level gradients at two rewetted cutover fens (mesotrophic and eutrophic) in Belarus. Greenhouse emissions were measured with manual chambers in weekly to few - weekly intervals over a two years period and interpolated by modelling. All sites had negligible nitrous oxide exchange rates. Most sites were carbon sinks and small GHG sources. Methane emissions were generally associated with net ecosystem CO2 uptake. Small sedges were minor methane emitters and net CO2 sinks, while Phragmites australis sites released large amounts of methane and sequestered very much CO2. Variability of both fluxes increased with site productivity. Floating mats composed of Carex tussocks and Typha latifolia were a source for both methane and CO2. We conclude that shallow, stable flooding is a better measure to arrive at low GHG emissions than deep flooding, and that the risk of high GHG emissions consequent on rewetting is larger for eutrophic than for mesotrophic peatlands.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/975150','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/975150"><span>Assessing carbon dynamics in semiarid ecosystems : Balancing potential gains with potential large rapid losses</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Breshears, D. D.; Ebinger, M. H.; Unkefer, P. J.</p> <p></p> <p>Photosynthesis and respiration are the largest fluxes into and out of the biosphere (Molles 1999). Consequently, small changes in these fluxes can potentially produce large changes in the storage of carbon in the biosphere. Terrestrial carbon fluxes account for more than half of the carbon transferred between the atmosphere and the earth's surface (about 120 GigaTons/year), and current stores of carbon in terrestrial ecosystem are estimated at 2060 GigaTons. Increasing attention is being focused on the role of managing and sequestering carbon in the terrestrial biosphere as a means for addressing global climate change (IGBP, 1998; U.S. Department of Energy,more » 1999). Terrestrial ecosystems are widely recognized as a major biological scrubber for atmosphereic CO{sub 2} and their ability to finction as such can be increased significantly over the next 25 years through careful manipulation. The potential for terrestrial carbon gains has been the subject of much attention (Dixon et al., 1994; Masera et al. 1997; Cao and Woodward, 1998; DeLucia et al. 1999). In contrast to other strategies for reducing net carbon emissions, terrestrial sequestration has the potential for rapid implementation. Strategies that focus on soil carbon are likely to be effective because in addition to being a storage pool of carbon, soil carbon also improves site productivity through improving soil quality (e.g., water retention and nutrient availability). The carbon pool in soils is immense and highly dynamic. The flux of carbon into and out of soils is one of the largest uncertainties in the total mass balance of global carbon (NRC, 1999; La1 et al., 1998; Cambardella, 1998). Reducing these uncertainties is key to developing carbon sequestration strategies. Soil carbon pools have been greatly depleted over recent centuries, and there is potential to increase storage of carbon in these soils through effective land management. Whereas carbon in vegetation can be managed directly through land use, carbon in soils generally must be managed indirectly through manipulation of vegetation and nutrients. Land management as well as climate changes have the potential to increase soil carbon, but also could trigger large soil carbon losses. Recently, the importance of accounting for countervailing losses in assessing potential amounts of terrestrial carbon that can be sequestered has been highlighted (Schlesinger, 1999; Walker et al., 1999). Realistic assessment of terrestrial carbon sequestration strategies must consider net results of an applied strategy, not simply projected carbon gains. In addition, large, rapid losses of carbon resulting from carbon management strategies could exacerbate the global warming rather than mitigating it. Such potential losses include rapid loss of carbon in vegetation due to fire and rapid loss of soil carbon triggered by reductions in ground cover (e.g., fire, drought). Therefore, strategies for terrestrial carbon sequestration must determine how to increase terrestrial carbon while minimizing the risk of large-scale catastrophic losses. Our objectives in this paper are to (1) highlight approaches that are being considered in terms of terrestrial carbon sequestration, (2) highlight case studies for which large losses of carbon may occur, and (3) suggest future directions and application for terrestrial carbon sequestration.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4459201','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4459201"><span>The deep permafrost carbon pool of the Yedoma region in Siberia and Alaska</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Strauss, Jens; Schirrmeister, Lutz; Grosse, Guido; Wetterich, Sebastian; Ulrich, Mathias; Herzschuh, Ulrike; Hubberten, Hans-Wolfgang</p> <p>2013-01-01</p> <p>[1] Estimates for circumpolar permafrost organic carbon (OC) storage suggest that this pool contains twice the amount of current atmospheric carbon. The Yedoma region sequestered substantial quantities of OC and is unique because its deep OC, which was incorporated into permafrost during ice age conditions. Rapid inclusion of labile organic matter into permafrost halted decomposition and resulted in a deep long-term sink. We show that the deep frozen OC in the Yedoma region consists of two distinct major subreservoirs: Yedoma deposits (late Pleistocene ice- and organic-rich silty sediments) and deposits formed in thaw-lake basins (generalized as thermokarst deposits). We quantified the OC pool based on field data and extrapolation using geospatial data sets to 83 + 61/−57 Gt for Yedoma deposits and to 128 + 99/−96 Gt for thermokarst deposits. The total Yedoma region 211 + 160/−153 Gt is a substantial amount of thaw-vulnerable OC that must be accounted for in global models. PMID:26074633</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/10078167','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/10078167"><span>Elemental mercury in the appendix: an unusual complication of a Mexican-American folk remedy.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>McKinney, P E</p> <p>1999-01-01</p> <p>Ingestion of small amounts of elemental mercury is generally thought to be harmless. However, in 4 previously reported cases, ingested mercury became sequestered in the appendix, causing appendicitis in one. We present a case in which elemental mercury was administered as a Mexican-American folk remedy for abdominal pain and became sequestered in the appendix. A 10-year-old Hispanic male presented with 3 days of right-sided abdominal pain, diarrhea, fever, and malaise. On admission, his temperature was 41.5 degrees C and he had right abdominal tenderness. Urinalysis showed 3 WBCs, 9 RBCs, occasional bacteria, and 1+ protein. An abdominal CT scan suggested right focal pyelonephritis, but also showed multiple intraabdominal metallic densities. On further questioning, the family admitted giving him elemental mercury as a remedy for "empacho." He was treated with intravenous ampicillin/sulbactam and gentamicin for a focal pyelonephritis. Because of mercury remaining in the gastrointestinal tract, activated charcoal and sorbitol were given. By hospital day 3, mercury filled the appendix as shown by abdominal radiograph. He was placed in the left lateral decubitus position overnight, and by the next morning, the mercury partially emptied from the appendix. By hospital day 8, his symptoms had resolved and mercury was no longer seen in the appendix. There were only minimal increases in urine mercury levels (18 mg/L). At 5-month follow-up, he has remained asymptomatic.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFM.H14E..02S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFM.H14E..02S"><span>Blind Inlet as a Possible Technology for the Remediation of Phosphorus from Surface Runoff</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Sturmlechner, M.; Wu, X.; Livingston, S.; Klik, A.; Huang, C. H.</p> <p>2015-12-01</p> <p>Phosphorus (P) is an essential element for plant life, but too much P in runoff water can cause eutrophication and harmful algal blooms. Hence, mitigation of agricultural P losses into the water cycle is a very important issue. In-stream P treatment is difficult to implement because the large amount of storm runoff needs to be treated in short durations. In this research, we evaluated the potential to use blind inlet as an in-field P treatment technology. A box system was built to simulate hydrological and chemical processes occurring in a blind inlet. Current blind inlets, which are already installed in the field, use a bed of limestone with a sand/pea gravel layer on the top. In this study, steel slags has been tested, which has a very high P sorption potential, as the filter media through a series of adsorption and desorption experiments. The P mass balance results are compared with the limestone material used in current blind inlet construction. The total mass of P which was absorbed by the limestone was 14 % of the P input into the system whereas 26 % P was absorbed by the steel slags. Therefore the steel slags show potential to sequester dissolved P. Additional research is on-going to come up with a design criteria for field implementation.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?direntryid=334251','PESTICIDES'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?direntryid=334251"><span>Water Utility Lime Sludge Reuse – An Environmental Sorbent ...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.epa.gov/pesticides/search.htm">EPA Pesticide Factsheets</a></p> <p></p> <p></p> <p>Lime sludge can be used as an environmental sorbent to remove sulfur dioxide (SO2) and acid gases, by the ultra-fine CaCO3 particles, and to sequester mercury and other heavy metals, by the Natural Organic Matter and residual activated carbon. The laboratory experimental set up included a simulated flue gas preparation unit, a lab-scale wet scrubber, and a mercury analyzer system. The influent mercury concentration was based on a range from 22 surveyed power plants. The reactivity of the lime sludge sample for acid neutralization was determined using a method similar to method ASTM C1318-95. Similar experiments were conducted using reagent calcium carbonate and calcium sulfate to obtain baseline data for comparing with the lime sludge test results. The project also evaluated the techno-economic feasibility and sustainable benefits of reusing lime softening sludge. If implemented on a large scale, this transformative approach for recycling waste materials from water treatment utilities at power generation utilities for environmental cleanup can save both water and power utilities millions of dollars. Huge amounts of lime sludge waste, generated from hundreds of water treatment utilities across the U.S., is currently disposed in landfills. This project evaluated a sustainable and economically-attractive approach to the use of lime sludge waste as a valuable resource for power generation utilities.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/1023447','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/1023447"><span>PLANTS AS BIO-MONITORS FOR 137CS, 238PU, 239, 240PU AND 40K AT THE SAVANNAH RIVER SITE</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Caldwell, E.; Duff, M.; Ferguson, C.</p> <p>2010-12-16</p> <p>The nuclear fuel cycle generates a considerable amount of radioactive waste, which often includes nuclear fission products, such as strontium-90 ({sup 90}Sr) and cesium-137 ({sup 137}Cs), and actinides such as uranium (U) and plutonium (Pu). When released into the environment, large quantities of these radionuclides can present considerable problems to man and biota due to their radioactive nature and, in some cases as with the actinides, their chemical toxicity. Radionuclides are expected to decay at a known rate. Yet, research has shown the rate of elimination from an ecosystem to differ from the decay rate due to physical, chemical andmore » biological processes that remove the contaminant or reduce its biological availability. Knowledge regarding the rate by which a contaminant is eliminated from an ecosystem (ecological half-life) is important for evaluating the duration and potential severity of risk. To better understand a contaminants impact on an environment, consideration should be given to plants. As primary producers, they represent an important mode of contamination transfer from sediments and soils into the food chain. Contaminants that are chemically and/or physically sequestered in a media are less likely to be bio-available to plants and therefore an ecosystem.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFMGC53C1222B','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFMGC53C1222B"><span>The Efficacy and Potential of Renewable Energy from Carbon Dioxide that is Sequestered in Sedimentary Basin Geothermal Resources</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Bielicki, J. M.; Adams, B. M.; Choi, H.; Saar, M. O.; Taff, S. J.; Jamiyansuren, B.; Buscheck, T. A.; Ogland-Hand, J.</p> <p>2015-12-01</p> <p>Mitigating climate change requires increasing the amount of electricity that is generated from renewable energy technologies and while simultaneously reducing the amount of carbon dioxide (CO2) that is emitted to the atmosphere from present energy and industrial facilities. We investigated the efficacy of generating electricity using renewable geothermal heat that is extracted by CO2 that is sequestered in sedimentary basins. To determine the efficacy of CO2-Geothermal power production in the United States, we conducted a geospatial resource assessment of the combination of subsurface CO2 storage capacity and heat flow in sedimentary basins and developed an integrated systems model that combines reservoir modeling with power plant modeling and economic costs. The geospatial resource assessment estimates the potential resource base for CO2-Geothermal power plants, and the integrated systems model estimates the physical (e.g., net power) and economic (e.g., levelized cost of electricity, capital cost) performance of an individual CO2-Geothermal power plant for a range of reservoir characteristics (permeability, depth, geothermal temperature gradient). Using coupled inverted five-spot injection patterns that are common in CO2-enhanced oil recovery operations, we determined the well pattern size that best leveraged physical and economic economies of scale for the integrated system. Our results indicate that CO2-Geothermal plants can be cost-effectively deployed in a much larger region of the United States than typical approaches to geothermal electricity production. These cost-effective CO2-Geothermal electricity facilities can also be capacity-competitive with many existing baseload and renewable energy technologies over a range of reservoir parameters. For example, our results suggest that, given the right combination of reservoir parameters, LCOEs can be as low as $25/MWh and capacities can be as high as a few hundred MW.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/1260866-elution-uranium-transition-metals-from-amidoxime-based-polymer-adsorbents-sequestering-uranium-from-seawater','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/1260866-elution-uranium-transition-metals-from-amidoxime-based-polymer-adsorbents-sequestering-uranium-from-seawater"><span>Elution of Uranium and Transition Metals from Amidoxime-Based Polymer Adsorbents for Sequestering Uranium from Seawater</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Pan, Horng-Bin; Kuo, Li-Jung; Wai, Chien M.</p> <p>2015-11-30</p> <p>High-surface-area amidoxime and carboxylic acid grafted polymer adsorbents developed at Oak Ridge National Laboratory were tested for sequestering uranium in a flowing seawater flume system at the PNNL-Marine Sciences Laboratory. FTIR spectra indicate that a KOH conditioning process is necessary to remove the proton from the carboxylic acid and make the sorbent effective for sequestering uranium from seawater. The alkaline conditioning process also converts the amidoxime groups to carboxylate groups in the adsorbent. Both Na 2CO 3-H 2O 2 and hydrochloric acid elution methods can remove ~95% of the uranium sequestered by the adsorbent after 42 days of exposure inmore » real seawater. The Na 2CO 3-H 2O 2 elution method is more selective for uranium than conventional acid elution. Iron and vanadium are the two major transition metals competing with uranium for adsorption to the amidoxime-based adsorbents in real seawater.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=292837&keyword=nmr&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=292837&keyword=nmr&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Native Soil Charcoal as a Model for Designing Biochar for Carbon Sequestration</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Under changing climate a variety of mechanisms for removing carbon from the atmosphere and sequestering it elsewhere are being considered to reduce the forcing of the atmosphere. Amending soils with biochar has been proposed as one long-term means of sequestering carbon originat...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/983527','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/983527"><span>An Evaluation of the Feasibility of Combining Carbon Dioxide Flooding Technologies with Microbial Enhanced Oil Recovery Technologies in Order To Sequester Carbon Dioxide</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Todd French; Lew Brown; Rafael Hernandez</p> <p>2009-08-19</p> <p>The need for more energy as our population grows results in an increase in the amount of CO2 introduced into the atmosphere. The effect of this introduction is currently debated intensely as to the severity of the effect of this. The bjective of this investigation was to determine if the production of more energy (i.e. petroleum) and the sequestration of CO2 could be coupled into one process. Carbon dioxide flooding is a well-established technique that introduces Compressed CO2 into a subsurface oil-bearing formation to aide in liquefying harder to extract petroleum and enhancing its mobility towards the production wells.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/6656289-radioimmunoassays-hidden-viral-antigens','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/6656289-radioimmunoassays-hidden-viral-antigens"><span>Radioimmunoassays of hidden viral antigens</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Neurath, A.R.; Strick, N.; Baker, L.</p> <p>1982-07-01</p> <p>Antigens corresponding to infectious agents may be present in biological specimens only in a cryptic form bound to antibodies and, thus, may elude detection. We describe a solid-phase technique for separation of antigens from antibodies. Immune complexes are precipitated from serum by polyethylene glycol, dissociated with NaSCN, and adsorbed onto nitrocellulose or polystyrene supports. Antigens remain topographically separated from antibodies after removal of NaSCN and can be detected with radiolabeled antibodies. Genomes from viruses immobilized on nitrocellulose can be identified by nucleic acid hybridization. Nanogram quantities of sequestered hepatitis B surface and core antigens and picogram amounts of hepatitis Bmore » virus DNA were detected. Antibody-bound adenovirus, herpesvirus, and measles virus antigens were discerned by the procedure.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/867309','DOE-PATENT-XML'); return false;" href="https://www.osti.gov/servlets/purl/867309"><span>Removal of metal ions from aqueous solution</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/doepatents">DOEpatents</a></p> <p>Jackson, Paul J.; Delhaize, Emmanuel; Robinson, Nigel J.; Unkefer, Clifford J.; Furlong, Clement</p> <p>1990-01-01</p> <p>A method of removing heavy metals from aqueous solution, a composition of matter used in effecting said removal, and apparatus used in effecting said removal. One or more of the polypeptides, poly (.gamma.-glutamylcysteinyl)glycines, is immobilized on an inert material in particulate form. Upon contact with an aqueous solution containing heavy metals, the polypeptides sequester the metals, removing them from the solution. There is selectivity of poly (.gamma.-glutamylcysteinyl)glycines having a particular number of monomer repeat units for particular metals. The polypeptides are easily regenerated by contact with a small amount of an organic acid, so that they can be used again to remove heavy metals from solution. This also results in the removal of the metals from the column in a concentrated form.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_6");'>6</a></li> <li><a href="#" onclick='return showDiv("page_7");'>7</a></li> <li class="active"><span>8</span></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_8 --> <div id="page_9" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_7");'>7</a></li> <li><a href="#" onclick='return showDiv("page_8");'>8</a></li> <li class="active"><span>9</span></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="161"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/867600','DOE-PATENT-XML'); return false;" href="https://www.osti.gov/servlets/purl/867600"><span>Removal of metal ions from aqueous solution</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/doepatents">DOEpatents</a></p> <p>Jackson, Paul J.; Delhaize, Emmanuel; Robinson, Nigel J.; Unkefer, Clifford J.; Furlong, Clement</p> <p>1990-11-13</p> <p>A method of removing heavy metals from aqueous solution, a composition of matter used in effecting said removal, and apparatus used in effecting said removal. One or more of the polypeptides, poly (.gamma.-glutamylcysteinyl)glycines, is immobilized on an inert material in particulate form. Upon contact with an aqueous solution containing heavy metals, the polypeptides sequester the metals, removing them from the solution. There is selectivity of poly (.gamma.-glutamylcysteinyl)glycines having a particular number of monomer repeat unit for particular metals. The polypeptides are easily regenerated by contact with a small amount of an organic acid, so that they can be used again to remove heayv metals from solution. This also results in the removal of the metals from the column in a concentrated form.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/868171','DOE-PATENT-XML'); return false;" href="https://www.osti.gov/servlets/purl/868171"><span>Compositions containing poly (.gamma.-glutamylcysteinyl)glycines</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/doepatents">DOEpatents</a></p> <p>Jackson, Paul J.; Delhaize, Emmanuel; Robinson, Nigel J.; Unkefer, Clifford J.; Furlong, Clement</p> <p>1992-01-01</p> <p>A method of removing heavy metals from aqueous solution, a composition of matter used in effecting said removal, and apparatus used in effecting said removal. One or more of the polypeptides, poly (.gamma.-glutamylcysteinyl)glycines, is immobilized on an inert material in particulate form. Upon contact with an aqueous solution containing heavy metals, the polypeptides sequester the metals, removing them from the solution. There is selectivity of poly (.gamma.-glutamylcysteinyl)glycines having a particular number of monomer repeat units for particular metals. The polypeptides are easily regenerated by contact with a small amount of an organic acid, so that they can be used again to remove heavy metals from solution. This also results in the removal of the metals from the column in a concentrated form.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28062735','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28062735"><span>Ability of Bruton's Tyrosine Kinase Inhibitors to Sequester Y551 and Prevent Phosphorylation Determines Potency for Inhibition of Fc Receptor but not B-Cell Receptor Signaling.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bender, Andrew T; Gardberg, Anna; Pereira, Albertina; Johnson, Theresa; Wu, Yin; Grenningloh, Roland; Head, Jared; Morandi, Federica; Haselmayer, Philipp; Liu-Bujalski, Lesley</p> <p>2017-03-01</p> <p>Bruton's tyrosine kinase (Btk) is expressed in a variety of hematopoietic cells. Btk has been demonstrated to regulate signaling downstream of the B-cell receptor (BCR), Fc receptors (FcRs), and toll-like receptors. It has become an attractive drug target because its inhibition may provide significant efficacy by simultaneously blocking multiple disease mechanisms. Consequently, a large number of Btk inhibitors have been developed. These compounds have diverse binding modes, and both reversible and irreversible inhibitors have been developed. Reported herein, we have tested nine Btk inhibitors and characterized on a molecular level how their interactions with Btk define their ability to block different signaling pathways. By solving the crystal structures of Btk inhibitors bound to the enzyme, we discovered that the compounds can be classified by their ability to trigger sequestration of Btk residue Y551. In cells, we found that sequestration of Y551 renders it inaccessible for phosphorylation. The ability to sequester Y551 was an important determinant of potency against FcεR signaling as Y551 sequestering compounds were more potent for inhibiting basophils and mast cells. This result was true for the inhibition of FcγR signaling as well. In contrast, Y551 sequestration was less a factor in determining potency against BCR signaling. We also found that Btk activity is regulated differentially in basophils and B cells. These results elucidate important determinants for Btk inhibitor potency against different signaling pathways and provide insight for designing new compounds with a broader inhibitory profile that will likely result in greater efficacy. Copyright © 2017 by The American Society for Pharmacology and Experimental Therapeutics.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.ars.usda.gov/research/publications/publication/?seqNo115=237348','TEKTRAN'); return false;" href="http://www.ars.usda.gov/research/publications/publication/?seqNo115=237348"><span>Conservation agricultural management to sequester soil organic carbon</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ars.usda.gov/research/publications/find-a-publication/">USDA-ARS?s Scientific Manuscript database</a></p> <p></p> <p></p> <p>Storing carbon (C) in soil as organic matter is not only a viable strategy to sequester CO2 from the atmosphere, but is vital for improving the quality, fertility, and functioning of soil. This presentation describes relevant management approaches to avoid land degradation and foster soil organic C ...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.nrc.gov/reading-rm/doc-collections/nuregs/contract/cr7178/','USGSPUBS'); return false;" href="https://www.nrc.gov/reading-rm/doc-collections/nuregs/contract/cr7178/"><span>Uranium Sequestration During Biostimulated Reduction and In Response to the Return of Oxic Conditions In Shallow Aquifers</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Fuller, Christopher C.; Johnson, Kelly J.; Akstin, Katherine; Singer, David M.; Yabusaki, Steven B.; Fang, Yilin; Fuhrmann, M.</p> <p>2015-01-01</p> <p>A proposed approach for groundwater remediation of uranium contamination is to generate reducing conditions by stimulating the growth of microbial populations through injection of electron donor compounds into the subsurface. Sufficiently reducing conditions will result in reduction of soluble hexavalent uranium, U(VI), and precipitation of the less soluble +4 oxidation state uranium, U(IV). This process is termed biostimulated reduction. A key issue in the remediation of uranium (U) contamination in aquifers by biostimulated reduction is the long term stability of the sequestered uranium. Three flow-through column experiments using aquifer sediment were used to evaluate the remobilization of bioreduced U sequestered under conditions in which biostimulation extended well into sulfate reduction to enhance precipitation of reduced sulfur phases such as iron sulfides. One column received added ferrous iron, Fe(II), increasing production of iron sulfides, to test their effect on remobilization of the sequestered uranium, either by serving as a redox buffer by competing for dissolved oxygen, or by armoring the reduced uranium. During biostimulation of the ambient microbial population with acetate, dissolved uranium was lowered by a factor of 2.5 or more with continued removal for over 110 days of biostimulation, well after the onset of sulfate reduction at ~30 days. Sequestered uranium was essentially all U(IV) resulting from the formation of nano-particulate uraninite that coated sediment grains to a thickness of a few 10’s of microns, sometimes in association with S and Fe. A multicomponent biogeochemical reactive transport model simulation of column effluents during biostimulation was generally able to describe the acetate oxidation, iron, sulfate, and uranium reduction for all three columns using parameters derived from simulations of field scale biostimulation experiments. Columns were eluted with artificial groundwater at equilibrium with atmospheric oxygen to simulate the upper limit of dissolved oxygen in recharge water. Overall about 9% of total uranium removed from solution during biostimulation was remobilized. Release of U during oxic elution was a continuous process over 140 days with dissolved uranium concentrations about 0.2 and 0.8 aM for columns with and without ferrous iron addition, respectively. Uranium remaining on the sediment was in the reduced form. The prolonged period of biostimulation and concomitant sulfate reduction appears to limit the rate of U(IV) oxidative remobilization in contrast to a large release observed for columns in previous studies that did not undergo sulfate reduction. Although continued sulfate reduction may cause decreased permeability from precipitation of iron sulfide, the greater apparent stability of the sequestered U(IV) provided by the sustained biostimulation should be considered in design of field scale remediation efforts. Remobilization of uranium following biostimulated reduction should be tested further at the field scale.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/972957-review-pyrolysis-platform-coproducing-bio-oil-biochar','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/972957-review-pyrolysis-platform-coproducing-bio-oil-biochar"><span>Review of the pyrolysis platform for coproducing bio-oil and biochar</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Laird, David A.; Brown, Robert C.; Amonette, James E.</p> <p>2009-09-01</p> <p>Pyrolysis is a relatively simple, inexpensive, and robust thermochemical technology for transforming biomass into bio-oil, biochar, and syngas. The robust nature of the pyrolysis technology, which allows considerable flexibility in both the type and quality of the biomass feedstock, combined with a distributed network of small pyrolysis plants, would be compatible with existing agriculture and forestry infrastructure. Bio-oil can be used as a fuel in existing industrial boilers. Biochar can be used with existing infrastructure as a replacement for pulverized coal; however, use of biochar as a soil amendment results in significant environmental and agronomic benefits. Soil application of biocharmore » is a means of sequestering large amounts of C and may have other greenhouse gas benefits. Preliminary reports of the impact of soil biochar applications on crop yields indicate that biochar quality is very important. Biochar is an effective adsorbent for both nutrients and organic contaminants, hence the presence of biochar in soils has been shown to improve water quality in column leaching and field lysimeter studies and it is anticipated to do the same for agricultural watersheds. The pyrolysis platform for producing bio-oil and biochar from biomass appears to be a practical, effective, and environmentally sustainable means of producing large quantities of renewable bioenergy while simultaneously reducing emissions of greenhouse gases. At the present time, the pyrolysis platform is economically marginal because markets for bio-oil and biochar are highly competitive. However, if the USA adopts a program for controlling greenhouse gases, the pyrolysis platform would be highly competitive.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFM.B32C..08M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFM.B32C..08M"><span>Ecosystem Level Methane Dynamics in a Southern Forest Wetland</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Mitra, B.; Minick, K.; Miao, G.; Furst, J.; Domec, J. C.; Sun, G.; McNulty, S.; King, J. S.; Noormets, A.</p> <p>2017-12-01</p> <p>Methane (CH4) budgets of most ecosystems remain poorly defined, particularly for the forested wetlands of the Southeastern United States.These once abundant ecosystems are unique in the amount of sequestered soil carbon they hold, and because of their interaction with climate through their contribution to both CO2 and CH4 exchange. The stability of the large C stocks in the vegetation and soil of these ecosystems is largest in submerged anoxic conditions, even though methanogenic processes still occur. However, the pressure from land development and drainage, more variable hydrology, and salt-water intrusion can alter the magnitude and balance of aerobic and anaerobic decomposition processes. Here we report five years of CH4 and CO2 fluxes from a forested wetland in the Alligator River National Wildlife Refuge (ARNWR) on the Albemarle-Pamlico Peninsula of North Carolina, USA. Time series of eddy covariance based estimates of CH4 fluxes from 2012 to 2016 show large temporal variation, with seasonal progression in daily mean fluxes from June through October. The peak methane emission coincided with the peak of gross primary production and ecosystem level respiration. The combined responses of these fluxes increases the uncertainty in whether wetlands will be sources or sinks of carbon. CH4 fluxes demonstrated strong variability and different environmental regulation across years and seasons. Water table depth and atmospheric pressure regulated synoptic and seasonal patterns of CH4 emissions. Across all years, the forested wetland emitted CH4 at rates far exceeding those reported for mid-latitude wetlands and rice paddy systems.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015JGRC..120.5545A','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015JGRC..120.5545A"><span>Environmental controls of marine productivity hot spots around Antarctica</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Arrigo, Kevin R.; van Dijken, Gert L.; Strong, Aaron L.</p> <p>2015-08-01</p> <p>Antarctic coastal polynyas are biologically rich ecosystems that support large populations of mammals and birds and are globally significant sinks of atmospheric carbon dioxide. To support local phytoplankton blooms, these highly productive ecosystems require a large input of iron (Fe), the sources of which are poorly known. Here we assess the relative importance of six different environmental factors in controlling the amount of phytoplankton biomass and rates of net primary production (NPP) in 46 coastal polynyas around Antarctica. Data presented here suggest that melting ice shelves are a primary supplier of Fe to coastal polynyas, with basal melt rates explaining 59% of the between-polynya variance in mean chlorophyll a (Chl a) concentration. In a multiple regression analysis, which explained 78% of the variance in chlorophyll a (Chl a) between polynyas, basal melt rate explained twice as much of the variance as the next most important variable. Fe upwelled from sediments, which is partly controlled by continental shelf width, was also important in some polynyas. Of secondary importance to phytoplankton abundance and NPP were sea surface temperature and polynya size. Surprisingly, differences in light availability and the length of the open water season explained little or none of the variance in either Chl a or NPP between polynyas. If the productivity of coastal polynyas is indeed sensitive to the release of Fe from melting ice shelves, future changes in ice shelf melt rates could dramatically influence Antarctic coastal ecosystems and the ability of continental shelf waters to sequester atmospheric carbon dioxide. This article was corrected on 26 AUG 2015. See the end of the full text for details.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/1994PNAS...91.8368S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/1994PNAS...91.8368S"><span>Transthyretin Sequesters Amyloid β Protein and Prevents Amyloid Formation</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Schwarzman, Alexander L.; Gregori, Luisa; Vitek, Michael P.; Lyubski, Sergey; Strittmatter, Warren J.; Enghilde, Jan J.; Bhasin, Ramaninder; Silverman, Josh; Weisgraber, Karl H.; Coyle, Patricia K.; Zagorski, Michael G.; Talafous, Joseph; Eisenberg, Moises; Saunders, Ann M.; Roses, Allen D.; Goldgaber, Dmitry</p> <p>1994-08-01</p> <p>The cardinal pathological features of Alzheimer disease are depositions of aggregated amyloid β protein (Aβ) in the brain and cerebrovasculature. However, the Aβ is found in a soluble form in cerebrospinal fluid in healthy individuals and patients with Alzheimer disease. We postulate that sequestration of Aβ precludes amyloid formation. Failure to sequester Aβ in Alzheimer disease may result in amyloidosis. When we added Aβ to cerebrospinal fluid of patients and controls it was rapidly sequestered into stable complexes with transthyretin. Complexes with apolipoprotein E, which has been shown to bind Aβ in vitro, were not observed in cerebrospinal fluid. Additional in vitro studies showed that both purified transthyretin and apolipoprotein E prevent amyloid formation.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://files.eric.ed.gov/fulltext/EJ885001.pdf','ERIC'); return false;" href="http://files.eric.ed.gov/fulltext/EJ885001.pdf"><span>A Mouse Click Away: Internet Resources for Students in Crisis in Geographically Isolated or Self-Sequestered Communities</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.eric.ed.gov/ERICWebPortal/search/extended.jsp?_pageLabel=advanced">ERIC Educational Resources Information Center</a></p> <p>Gary, Juneau Mahan</p> <p>2010-01-01</p> <p>The impact, incidence, prevalence, and severity of violence and trauma adversely affect students academically, behaviorally, emotionally, and socially. For students residing in geographically isolated or self-sequestered communities, trauma may be exacerbated when school counselors may be unprepared to respond effectively and timely because…</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/989012','DOE-PATENT-XML'); return false;" href="https://www.osti.gov/servlets/purl/989012"><span>Process for sequestering carbon dioxide and sulfur dioxide</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/doepatents">DOEpatents</a></p> <p>Maroto-Valer, M Mercedes [State College, PA; Zhang, Yinzhi [State College, PA; Kuchta, Matthew E [State College, PA; Andresen, John M [State College, PA; Fauth, Dan J [Pittsburgh, PA</p> <p>2009-10-20</p> <p>A process for sequestering carbon dioxide, which includes reacting a silicate based material with an acid to form a suspension, and combining the suspension with carbon dioxide to create active carbonation of the silicate-based material, and thereafter producing a metal salt, silica and regenerating the acid in the liquid phase of the suspension.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27848102','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27848102"><span>Can greening of aquaculture sequester blue carbon?</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ahmed, Nesar; Bunting, Stuart W; Glaser, Marion; Flaherty, Mark S; Diana, James S</p> <p>2017-05-01</p> <p>Globally, blue carbon (i.e., carbon in coastal and marine ecosystems) emissions have been seriously augmented due to the devastating effects of anthropogenic pressures on coastal ecosystems including mangrove swamps, salt marshes, and seagrass meadows. The greening of aquaculture, however, including an ecosystem approach to Integrated Aquaculture-Agriculture (IAA) and Integrated Multi-Trophic Aquaculture (IMTA) could play a significant role in reversing this trend, enhancing coastal ecosystems, and sequestering blue carbon. Ponds within IAA farming systems sequester more carbon per unit area than conventional fish ponds, natural lakes, and inland seas. The translocation of shrimp culture from mangrove swamps to offshore IMTA could reduce mangrove loss, reverse blue carbon emissions, and in turn increase storage of blue carbon through restoration of mangroves. Moreover, offshore IMTA may create a barrier to trawl fishing which in turn could help restore seagrasses and further enhance blue carbon sequestration. Seaweed and shellfish culture within IMTA could also help to sequester more blue carbon. The greening of aquaculture could face several challenges that need to be addressed in order to realize substantial benefits from enhanced blue carbon sequestration and eventually contribute to global climate change mitigation.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016NatSR...632372V','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016NatSR...632372V"><span>Substrate prediction of Ixodes ricinus salivary lipocalins differentially expressed during Borrelia afzelii infection</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Valdés, James J.; Cabezas-Cruz, Alejandro; Sima, Radek; Butterill, Philip T.; Růžek, Daniel; Nuttall, Patricia A.</p> <p>2016-09-01</p> <p>Evolution has provided ticks with an arsenal of bioactive saliva molecules that counteract host defense mechanisms. This salivary pharmacopoeia enables blood-feeding while enabling pathogen transmission. High-throughput sequencing of tick salivary glands has thus become a major focus, revealing large expansion within protein encoding gene families. Among these are lipocalins, ubiquitous barrel-shaped proteins that sequester small, typically hydrophobic molecules. This study was initiated by mining the Ixodes ricinus salivary gland transcriptome for specific, uncharacterized lipocalins: three were identified. Differential expression of these I. ricinus lipocalins during feeding at distinct developmental stages and in response to Borrelia afzelii infection suggests a role in transmission of this Lyme disease spirochete. A phylogenetic analysis using 803 sequences places the three I. ricinus lipocalins with tick lipocalins that sequester monoamines, leukotrienes and fatty acids. Both structural analysis and biophysical simulations generated robust predictions showing these I. ricinus lipocalins have the potential to bind monoamines similar to other tick species previously reported. The multidisciplinary approach employed in this study characterized unique lipocalins that play a role in tick blood-feeding and transmission of the most important tick-borne pathogen in North America and Eurasia.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4298725','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4298725"><span>Photoprotection in sequestered plastids of sea slugs and respective algal sources</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Cruz, Sónia; Cartaxana, Paulo; Newcomer, Rebecca; Dionísio, Gisela; Calado, Ricardo; Serôdio, João; Pelletreau, Karen N.; Rumpho, Mary E.</p> <p>2015-01-01</p> <p>Some sea slugs are capable of retaining functional sequestered chloroplasts (kleptoplasts) for variable periods of time. The mechanisms supporting the maintenance of these organelles in animal hosts are still largely unknown. Non-photochemical quenching (NPQ) and the occurrence of a xanthophyll cycle were investigated in the sea slugs Elysia viridis and E. chlorotica using chlorophyll fluorescence measurements and pigment analysis. The photoprotective capacity of kleptoplasts was compared to that observed in their respective algal source, Codium tomentosum and Vaucheria litorea. A functional xanthophyll cycle and a rapidly reversible NPQ component were found in V. litorea and E. chlorotica but not in C. tomentosum and E. viridis. To our knowledge, this is the first report of the absence of a functional xanthophyll cycle in a green macroalgae. The absence of a functional xanthophyll cycle in C. tomentosum could contribute to the premature loss of photosynthetic activity and relatively short-term retention of kleptoplasts in E. viridis. On the contrary, E. chlorotica displays one of the longest functional examples of kleptoplasty known so far. We speculate that different efficiencies of photoprotection and repair mechanisms of algal food sources play a role in the longevity of photosynthetic activity in kleptoplasts retained by sea slugs. PMID:25601025</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013EPJWC..5004003W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013EPJWC..5004003W"><span>Design of a perfluorocarbon tracer based monitoring network to support monitoring verification and accounting of sequestered CO2</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Watson, T.; Sullivan, T.</p> <p>2013-05-01</p> <p>The levels of CO2 in the atmosphere have been growing since the beginning of the industrial revolution. The current level is 391 ppm. If there are no efforts to mitigate CO2 emissions, the levels will rise to 750 ppm by 2100. Geologic carbon sequestration is one strategy that may be used to begin to reduce emissions. Sequestration will not be effective unless reservoir leak rates are significantly less than 1%. There must be rigorous monitoring protocols in place to ensure sequestration projects meet regulatory and environmental goals. Monitoring for CO2 leakage directly is difficult because of the large background levels and variability of CO2 in the atmosphere. Using tracers to tag the sequestered CO2 can mitigate some of the difficulties of direct measurement but a tracer monitoring network and the levels of tagging need to be carefully designed. Simple diffusion and dispersion models are used to predict the surface and atmospheric concentrations that would be seen by a network monitoring a sequestration site. Levels of tracer necessary to detect leaks from 0.01 to 1% are presented and suggestions for effective monitoring and protection of global tracer utility are presented.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.ars.usda.gov/research/publications/publication/?seqNo115=290171','TEKTRAN'); return false;" href="http://www.ars.usda.gov/research/publications/publication/?seqNo115=290171"><span>Genetically modified Medicago truncatula lacking calcium oxalate has increased calcium bioavailability and partially rescues vitamin D receptor knockout mice phenotypes</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ars.usda.gov/research/publications/find-a-publication/">USDA-ARS?s Scientific Manuscript database</a></p> <p></p> <p></p> <p>How the distribution and sequestered form of plant macro/micro-nutrients influence their bioavailability, and ultimately impact human health, is poorly understood. The legume Medicago truncatula has a portion of its tissue calcium sequestered in the form of the calcium oxalate crystal, which reduces...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70035780','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70035780"><span>Arsenic species in weathering mine tailings and biogenic solids at the Lava Cap Mine Superfund Site, Nevada City, CA</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Foster, Andrea L.; Ashley, Roger P.; Rytuba, James J.</p> <p>2011-01-01</p> <p>Sub- to anoxic conditions minimize dissolution of arsenopyrite at the LCMS site, but may accelerate the dissolution of As-bearing secondary iron phases such as Fe3+-oxyhydroxides and arseniosiderite, if sufficient organic matter is present to spur anaerobic microbial activity. Oxidizing, dry conditions favor the stabilization of secondary phases, while promoting oxidative breakdown of the primary sulfides. The stability of both primary and secondary As phases is likely to be at a minimum under cyclic wet-dry conditions. Biogenic iron (hydr)oxide flocs can sequester significant amounts of arsenic; this property may be useful for treatment of perpetual sources of As such as mine adit water, but the fate of As associated with natural accumulations of floc material needs to be assessed.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27708149','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27708149"><span>Urban warming reduces aboveground carbon storage.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Meineke, Emily; Youngsteadt, Elsa; Dunn, Robert R; Frank, Steven D</p> <p>2016-10-12</p> <p>A substantial amount of global carbon is stored in mature trees. However, no experiments to date test how warming affects mature tree carbon storage. Using a unique, citywide, factorial experiment, we investigated how warming and insect herbivory affected physiological function and carbon sequestration (carbon stored per year) of mature trees. Urban warming increased herbivorous arthropod abundance on trees, but these herbivores had negligible effects on tree carbon sequestration. Instead, urban warming was associated with an estimated 12% loss of carbon sequestration, in part because photosynthesis was reduced at hotter sites. Ecosystem service assessments that do not consider urban conditions may overestimate urban tree carbon storage. Because urban and global warming are becoming more intense, our results suggest that urban trees will sequester even less carbon in the future. © 2016 The Author(s).</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/7207234','DOE-PATENT-XML'); return false;" href="https://www.osti.gov/biblio/7207234"><span>Compositions containing poly ([gamma]glutamylcysteinyl)glycines</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/doepatents">DOEpatents</a></p> <p>Jackson, P.J.; Delhaize, E.; Robinson, N.J.; Unkefer, C.J.; Furlong, C.</p> <p>1992-02-18</p> <p>A method of removing heavy metals from aqueous solution, a composition of matter used in effecting the removal, and the apparatus used in effecting the removal are described. One or more of the polypeptides, poly ([gamma]glutamylcysteinyl)glycines, is immobilized on an inert material in particulate form. Upon contact with an aqueous solution containing heavy metals, the polypeptides sequester the metals, removing them from the solution. There is selectivity of poly ([gamma]glutamylcysteinyl)glycines having a particular number of monomer repeat units for particular metals. The polypeptides are easily regenerated by contact with a small amount of an organic acid, so that they can be used again to remove heavy metals from solution. This also results in the removal of the metals from the column in a concentrated form. 1 figs.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4063787','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4063787"><span>Aboveground Tree Growth Varies with Belowground Carbon Allocation in a Tropical Rainforest Environment</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Raich, James W.; Clark, Deborah A.; Schwendenmann, Luitgard; Wood, Tana E.</p> <p>2014-01-01</p> <p>Young secondary forests and plantations in the moist tropics often have rapid rates of biomass accumulation and thus sequester large amounts of carbon. Here, we compare results from mature forest and nearby 15–20 year old tree plantations in lowland Costa Rica to evaluate differences in allocation of carbon to aboveground production and root systems. We found that the tree plantations, which had fully developed, closed canopies, allocated more carbon belowground - to their root systems - than did mature forest. This increase in belowground carbon allocation correlated significantly with aboveground tree growth but not with canopy production (i.e., leaf fall or fine litter production). In contrast, there were no correlations between canopy production and either tree growth or belowground carbon allocation. Enhanced allocation of carbon to root systems can enhance plant nutrient uptake, providing nutrients beyond those required for the production of short-lived tissues such as leaves and fine roots, and thus enabling biomass accumulation. Our analyses support this deduction at our site, showing that enhanced allocation of carbon to root systems can be an important mechanism promoting biomass accumulation during forest growth in the moist tropics. Identifying factors that control when, where and for how long this occurs would help us to improve models of forest growth and nutrient cycling, and to ascertain the role that young forests play in mitigating increased atmospheric carbon dioxide. PMID:24945351</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_7");'>7</a></li> <li><a href="#" onclick='return showDiv("page_8");'>8</a></li> <li class="active"><span>9</span></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_9 --> <div id="page_10" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_8");'>8</a></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li class="active"><span>10</span></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="181"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/21708387','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/21708387"><span>Primary, secondary, and tertiary amines for CO2 capture: designing for mesoporous CO2 adsorbents.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ko, Young Gun; Shin, Seung Su; Choi, Ung Su</p> <p>2011-09-15</p> <p>CO(2) emissions, from fossil-fuel-burning power plants, the breathing, etc., influence the global worming on large scale and the man's work efficiency on small scale. The reversible capture of CO(2) is a prominent feature of CO(2) organic-inorganic hybrid adsorbent to sequester CO(2). Herein, (3-aminopropyl) trimethoxysilane (APTMS), [3-(methylamino)propyl] trimethoxysilane (MAPTMS), and [3-(diethylamino) propyl] trimethoxysilane (DEAPTMS) are immobilized on highly ordered mesoporous silicas (SBA-15) to catch CO(2) as primary, secondary, and tertiary aminosilica adsorbents. X-ray photoelectron spectroscopy was used to analyze the immobilized APTMS, MAPTMS, and DEAPTMS on the SBA-15. We report an interesting discovery that the CO(2) adsorption and desorption on the adsorbent depend on the amine type of the aminosilica adsorbent. The adsorbed CO(2) was easily desorbed from the adsorbent with the low energy consumption in the order of tertiary, secondary, and primary amino-adsorbents while the adsorption amount and the bonding-affinity increased in the reverse order. The effectiveness of amino-functionalized (1(o), 2(o), and 3(o) amines) SBA-15s as a CO(2) capturing agent was investigated in terms of adsorption capacity, adsorption-desorption kinetics, and thermodynamics. This work demonstrates apt amine types to catch CO(2) and regenerate the adsorbent, which may open new avenues to designing "CO(2) basket". Copyright © 2011. Published by Elsevier Inc.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23129610','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23129610"><span>Carbon abatement via treating the solid waste from the Australian olive industry in mobile pyrolysis units: LCA with uncertainty analysis.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>El Hanandeh, Ali</p> <p>2013-04-01</p> <p>The olive oil industry in Australia has been growing at a rapid rate over the past decade. It is forecast to continue growing due to the steady increase in demand for olive oil and olive products in the local and regional market. However, the olive oil extraction process generates large amounts of solid waste called olive husk which is currently underutilized. This paper uses life-cycle methodology to analyse the carbon emission reduction potential of utilizing olive husk as a feedstock in a mobile pyrolysis unit. Four scenarios, based on different combinations of pyrolysis technologies (slow versus fast) and end-use of products (land application versus energy utilization), are constructed. The performance of each scenario under conditions of uncertainty was also investigated. The results show that all scenarios result in significant carbon emission abatement. Processing olive husk in mobile fast pyrolysis units and the utilization of bio-oil and biochar as substitutes for heavy fuel oil and coal is likely to realize a carbon offset greater than 32.3 Gg CO2-eq annually in 90% of the time. Likewise, more than 3.2 Gg-C (11.8 Gg CO2-eq) per year could be sequestered in the soil in the form of fixed carbon if slow mobile pyrolysis units were used to produce biochar.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/16825457','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/16825457"><span>Soil organic carbon sequestration in cotton production systems of the southeastern United States: a review.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Causarano, H J; Franzluebbers, A J; Reeves, D W; Shaw, J N</p> <p>2006-01-01</p> <p>Past agricultural management practices have contributed to the loss of soil organic carbon (SOC) and emission of greenhouse gases (e.g., carbon dioxide and nitrous oxide). Fortunately, however, conservation-oriented agricultural management systems can be, and have been, developed to sequester SOC, improve soil quality, and increase crop productivity. Our objectives were to (i) review literature related to SOC sequestration in cotton (Gossypium hirsutum L.) production systems, (ii) recommend best management practices to sequester SOC, and (iii) outline the current political scenario and future probabilities for cotton producers to benefit from SOC sequestration. From a review of 20 studies in the region, SOC increased with no tillage compared with conventional tillage by 0.48 +/- 0.56 Mg C ha(-1) yr(-1) (H(0): no change, p < 0.001). More diverse rotations of cotton with high-residue-producing crops such as corn (Zea mays L.) and small grains would sequester greater quantities of SOC than continuous cotton. No-tillage cropping with a cover crop sequestered 0.67 +/- 0.63 Mg C ha(-1) yr(-1), while that of no-tillage cropping without a cover crop sequestered 0.34 +/- 47 Mg C ha(-1) yr(-1) (mean comparison, p = 0.04). Current government incentive programs recommend agricultural practices that would contribute to SOC sequestration. Participation in the Conservation Security Program could lead to government payments of up to Dollars 20 ha(-1). Current open-market trading of C credits would appear to yield less than Dollars 3 ha(-1), although prices would greatly increase should a government policy to limit greenhouse gas emissions be mandated.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4866489','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4866489"><span>Differential Regulation of Angiogenesis using Degradable VEGF-Binding Microspheres</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Belair, David G.; Miller, Michael J.; Wang, Shoujian; Darjatmokon, Soesiawati R.; Binder, Bernard Y.K.; Sheibani, Nader; Murphy, William L.</p> <p>2016-01-01</p> <p>Vascular endothelial growth factor (VEGF) spatial and temporal activity must be tightly controlled during angiogenesis to form perfusable vasculature in a healing wound. The native extracellular matrix (ECM) regulates growth factor activity locally via sequestering, and researchers have used ECM-mimicking approaches to regulate the activity of VEGF in cell culture and in vivo. However, the impact of dynamic, affinity-mediated growth factor sequestering has not been explored in detail with biomaterials. Here, we sought to modulate VEGF activity dynamically over time using poly(ethylene glycol) microspheres containing VEGF-binding peptides (VBPs) and exhibiting varying degradation rates. The degradation rate of VBP microspheres conferred a differential ability to up- or down-regulate VEGF activity in culture with primary human endothelial cells. VBP microspheres with fast-degrading crosslinks reduced VEGF activity and signaling, while VBP microspheres with no inherent degradability sequestered and promoted VEGF activity in culture with endothelial cells. VBP microspheres with degradable crosslinks significantly reduced neovascularization in vivo, but neither non-degradable VBP microspheres nor bolus delivery of soluble VBP reduced neovascularization. The covalent incorporation of VBP to degradable microspheres was required to reduce neovascularization in a mouse model of choroidal neovascularization in vivo, which demonstrates a potential clinical application of degradable VBP microspheres to reduce pathological angiogenesis. The results herein highlight the ability to modulate the activity of a sequestered growth factor by changing the crosslinker identity within PEG hydrogel microspheres. The insights gained here may instruct the design and translation of affinity-based growth factor sequestering biomaterials for regenerative medicine applications. PMID:27061268</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.fs.usda.gov/treesearch/pubs/14989','TREESEARCH'); return false;" href="https://www.fs.usda.gov/treesearch/pubs/14989"><span>Carbon sequestration in forests as a national policy issue</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.fs.usda.gov/treesearch/">Treesearch</a></p> <p>Linda S. Heath; Linda A. Joyce</p> <p>1997-01-01</p> <p>The United States' 1993 Climate Change Action Plan called upon the forestry sector to sequester an additional 10 million metric tons/yr by the year 2000. Forests are currently sequestering carbon and may provide opportunities to mitigate fossil fuel emissions in the near-term until fossil fuel emissions can be reduced. Using the analysis of carbon budgets based on...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.fs.usda.gov/treesearch/pubs/44268','TREESEARCH'); return false;" href="https://www.fs.usda.gov/treesearch/pubs/44268"><span>Forest carbon benefits, costs and leakage effects of carbon reserve scenarios in the United States</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.fs.usda.gov/treesearch/">Treesearch</a></p> <p>Prakash Nepal; Peter J. Ince; Kenneth E. Skog; Sun J. Chang</p> <p>2013-01-01</p> <p>This study evaluated the potential effectiveness of future carbon reserve scenarios, where U.S. forest landowners would hypothetically be paid to sequester carbon on their timberland and forego timber harvests for 100 years. Scenarios featured direct payments to landowners of $0 (baseline), $5, $10, or $15 per metric ton of additional forest carbon sequestered on the...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.fs.usda.gov/treesearch/pubs/44970','TREESEARCH'); return false;" href="https://www.fs.usda.gov/treesearch/pubs/44970"><span>Aligning ecology and markets in the forest carbon cycle</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.fs.usda.gov/treesearch/">Treesearch</a></p> <p>Matthew D. Hurteau; Bruce A. Hungate; George W. Koch; Malcolm P. North; Gordon R Smith</p> <p>2013-01-01</p> <p>A forest carbon (C) offset is a quantifiable unit of C that is commonly developed at the local or regional project scale and is designed to counterbalance anthropogenic C emissions by sequestering C in trees. In capand- trade programs, forest offsets have market value if the sequestered C is additional (more than would have occurred in the absence of the project) and...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/pages/biblio/1265763-elution-uranium-transition-metals-from-amidoxime-based-polymer-adsorbents-sequestering-uranium-from-seawater','SCIGOV-DOEP'); return false;" href="https://www.osti.gov/pages/biblio/1265763-elution-uranium-transition-metals-from-amidoxime-based-polymer-adsorbents-sequestering-uranium-from-seawater"><span>Elution of uranium and transition metals from amidoxime-based polymer adsorbents for sequestering uranium from seawater</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/pages">DOE PAGES</a></p> <p>Pan, Horng-Bin; Kuo, Li-Jung; Miyamoto, Naomi; ...</p> <p>2015-11-30</p> <p>High-surface-area amidoxime and carboxylic acid grafted polymer adsorbents developed at Oak Ridge National Laboratory were tested for sequestering uranium in a flowing seawater flume system at the PNNL-Marine Sciences Laboratory. FTIR spectra indicate that a KOH conditioning process is necessary to remove the proton from the carboxylic acid and make the sorbent effective for sequestering uranium from seawater. The alkaline conditioning process also converts the amidoxime groups to carboxylate groups in the adsorbent. Both Na 2CO 3 H 2O 2 and hydrochloric acid elution methods can remove ~95% of the uranium sequestered by the adsorbent after 42 days of exposuremore » in real seawater. The Na 2CO 3 H 2O 2 elution method is more selective for uranium than conventional acid elution. Iron and vanadium are the two major transition metals competing with uranium for adsorption to the amidoxime-based adsorbents in real seawater. Tiron (4,5-Dihydroxy-1,3-benzenedisulfonic acid disodium salt, 1 M) can remove iron from the adsorbent very effectively at pH around 7. The coordination between vanadium (V) and amidoxime is also discussed based on our 51V NMR data.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015NatSR...512045H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015NatSR...512045H"><span>In-situ observation for growth of hierarchical metal-organic frameworks and their self-sequestering mechanism for gas storage</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Hyo Park, Jung; Min Choi, Kyung; Joon Jeon, Hyung; Jung Choi, Yoon; Ku Kang, Jeung</p> <p>2015-07-01</p> <p>Although structures with the single functional constructions and micropores were demonstrated to capture many different molecules such as carbon dioxide, methane, and hydrogen with high capacities at low temperatures, their feeble interactions still limit practical applications at room temperature. Herein, we report in-situ growth observation of hierarchical pores in pomegranate metal-organic frameworks (pmg-MOFs) and their self-sequestering storage mechanism, not observed for pristine MOFs. Direct observation of hierarchical pores inside the pmg-MOF was evident by in-situ growth X-ray measurements while self-sequestering storage mechanism was revealed by in-situ gas sorption X-ray analysis and molecular dynamics simulations. The results show that meso/macropores are created at the early stage of crystal growth and then enclosed by micropore crystalline shells, where hierarchical pores are networking under self-sequestering mechanism to give enhanced gas storage. This pmg-MOF gives higher CO2 (39%) and CH4 (14%) storage capacity than pristine MOF at room temperature, in addition to fast kinetics with robust capacity retention during gas sorption cycles, thus giving the clue to control dynamic behaviors of gas adsorption.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUFM.B21I0545R','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUFM.B21I0545R"><span>Anthropogenic Disturbance of Montane Meadows May Cause Substantial Loss of Soil Carbon to the Atmosphere</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Reed, C. C.; Sullivan, B. W.; Hart, S. C.; Drew, M.; Merrill, A.</p> <p>2016-12-01</p> <p>High-elevation meadows are biological hotspots that contain high densities of soil carbon (C). The capacity of these ecosystems to sequester C depends on a combination of high primary productivity, seasonally low temperatures, and anaerobic soil conditions associated with water tables at or near the soil surface. However, anthropogenic disturbances in many montane meadows in California's Sierra Nevada have lowered water tables, decreased primary productivity, and created aerobic soil conditions - changes that may alter the balance of greenhouse gas (GHG) emissions and reverse meadows from a net C sink to a net source. Recently, C policy in California has spurred interest in the potential of hydrologic restoration to increase C sequestration in meadows. However, soil C pools and fluxes in degraded meadows must be quantified before the impacts of restoration can accurately be assessed. In this study, we measured soil C stocks in surface soil (1 m) and annual soil GHG fluxes (carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O)) in three degraded, northern Sierra Nevada meadows. In a parallel laboratory incubation, we manipulated meadow soil water content to determine target goals for restoration of anaerobic conditions. Our results suggest that degraded meadows contain large reservoirs of existing C, but that this C may be vulnerable to decomposition under current conditions. Soil CO2 fluxes ranged from 26.7-33.1 Mg of CO2 ha-1 y-1, roughly equivalent to the amount of C sequestered annually by 70 acres of U.S. forests. These high rates of soil respiration, combined with low primary productivity, resulted in substantial losses of soil C with implications for climate change, ecosystem function, and restoration. Soils from these meadows were a net source of N2O and a net sink of CH4, but these fluxes were 4 orders of magnitude smaller than CO2. Also, we found substantial GHG emissions persist in these organic soils at peak soil moisture, suggesting that restoration may need to sustain soil water holding capacities in excess of 115%, and possibly 200%, for anaerobic soil conditions to return. These findings highlight the need to conserve properly functioning meadows and provide target conditions for optimal restoration of degraded meadows.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/21669753','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/21669753"><span>A food's-eye view of the transition from basal metazoans to bilaterians.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Blackstone, Neil W</p> <p>2007-11-01</p> <p>Living things invariably consist of some kind of compartmentalized redox chemistry. Signaling pathways mediated by oxidation and reduction thus derive from the nature of life itself. The role of such redox or metabolic signaling broadened with major transitions in the history of life. Prokaryotes often use redox signals to deploy one or more variant electron carriers and associated enzymes to better utilize environmental energy sources. Eukaryotes transcend the strong surface-to-volume constraints inherent in prokaryotic cells by moving chemiosmotic membranes internally. As a consequence, eukaryotic redox signaling is frequently between these organelle membranes and the nucleus, thus potentially involving levels-of-selection synergies and antagonisms. Gradients of oxygen and substrate in simple multicellular organisms similarly associated metabolic signaling with levels of selection, now at the level of the cell and the organism. By allowing sequestration of large amounts of food, the evolution of the animal mouth was a pivotal event in metabolic signaling, leading to "multicellular" redox regulation. Because concentrated food resources may be patchy in time and space, long-lived sedentary animals with mouths employ such metabolic signaling and phenotypic plasticity in ways that adapt them to the changing availability of food. Alternatively, if the mouth is coupled to a battery of sensory equipment, the organism can actively seek out and sequester patches of food. In these early bilaterians, competition for food resources may have favored rapid development with little subsequent plasticity and metabolic signaling. With rapid dispersal and colonization, such "assembly-line" animals could effectively compete for patchy resources. Limiting metabolic signaling, however, resulted in a cascade of seemingly unrelated changes. These changes derive from the effectiveness of metabolic signaling in policing variation at the cellular level. If the signals an organism uses to control cellular replication are the same as the signals a cell uses to control its own metabolism, then cells that ignore these signals and carry out selfish replication will pay a fitness cost in terms of inefficient metabolism. Bilaterians with limited metabolic signaling thus require other mechanisms to police cell-level variation. Bilaterian features such as restricted somatic cell potency, a sequestered germ line, and determinate growth should be viewed in this context. Bilaterian senescence evolved as a by-product of restricted potency of somatic cells, itself a mechanism of cell policing required by limited metabolic signaling.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/17968317','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/17968317"><span>Human APC sequesters beta-catenin even in the absence of GSK-3beta in a Drosophila model.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Rao, P R; Makhijani, K; Shashidhara, L S</p> <p>2008-04-10</p> <p>There have been conflicting reports on the requirement of GSK-3beta-mediated phosphorylation of the tumor suppressor adenomatous polyposis coli (APC) vis-à-vis its ability to bind and degrade beta-catenin. Using a unique combination of loss of function for Shaggy/GSK-3beta and a gain of function for human APC in Drosophila, we show that misexpressed human APC (hAPC) can still sequester Armadillo/beta-catenin. In addition, human APC could suppress gain of Wnt/Wingless phenotypes associated with loss of Shaggy/GSK-3beta activity, suggesting that sequestered Armadillo/beta-catenin is non-functional. Based on these studies, we propose that binding per se of beta-catenin by APC does not require phosphorylation by GSK-3beta.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/11245789','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/11245789"><span>The rapid mode of calcium uptake into heart mitochondria (RaM): comparison to RaM in liver mitochondria.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Buntinas, L; Gunter, K K; Sparagna, G C; Gunter, T E</p> <p>2001-04-02</p> <p>A mechanism of Ca(2+) uptake, capable of sequestering significant amounts of Ca(2+) from cytosolic Ca(2+) pulses, has previously been identified in liver mitochondria. This mechanism, the Rapid Mode of Ca(2+) uptake (RaM), was shown to sequester Ca(2+) very rapidly at the beginning of each pulse in a sequence [Sparagna et al. (1995) J. Biol. Chem. 270, 27510-27515]. The existence and properties of RaM in heart mitochondria, however, are unknown and are the basis for this study. We show that RaM functions in heart mitochondria with some of the characteristics of RaM in liver, but its activation and inhibition are quite different. It is feasible that these differences represent different physiological adaptations in these two tissues. In both tissues, RaM is highly conductive at the beginning of a Ca(2+) pulse, but is inhibited by the rising [Ca(2+)] of the pulse itself. In heart mitochondria, the time required at low [Ca(2+)] to reestablish high Ca(2+) conductivity via RaM i.e. the 'resetting time' of RaM is much longer than in liver. RaM in liver mitochondria is strongly activated by spermine, activated by ATP or GTP and unaffected by ADP and AMP. In heart, RaM is activated much less strongly by spermine and unaffected by ATP or GTP. RaM in heart is strongly inhibited by AMP and has a biphasic response to ADP; it is activated at low concentrations and inhibited at high concentrations. Finally, an hypothesis consistent with the data and characteristics of liver and heart is presented to explain how RaM may function to control the rate of oxidative phosphorylation in each tissue. Under this hypothesis, RaM functions to create a brief, high free Ca(2+) concentration inside mitochondria which may activate intramitochondrial metabolic reactions with relatively small amounts of Ca(2+) uptake. This hypothesis is consistent with the view that intramitochondrial [Ca(2+)] may be used to control the rate of ADP phosphorylation in such a way as to minimize the probability of activating the Ca(2+)-induced mitochondrial membrane permeability transition (MPT).</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25230693','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25230693"><span>Reforestation with native mixed-species plantings in a temperate continental climate effectively sequesters and stabilizes carbon within decades.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Cunningham, Shaun C; Cavagnaro, Timothy R; Mac Nally, Ralph; Paul, Keryn I; Baker, Patrick J; Beringer, Jason; Thomson, James R; Thompson, Ross M</p> <p>2015-04-01</p> <p>Reforestation has large potential for mitigating climate change through carbon sequestration. Native mixed-species plantings have a higher potential to reverse biodiversity loss than do plantations of production species, but there are few data on their capacity to store carbon. A chronosequence (5-45 years) of 36 native mixed-species plantings, paired with adjacent pastures, was measured to investigate changes to stocks among C pools following reforestation of agricultural land in the medium rainfall zone (400-800 mm yr(-1)) of temperate Australia. These mixed-species plantings accumulated 3.09 ± 0.85 t C ha(-1) yr(-1) in aboveground biomass and 0.18 ± 0.05 t C ha(-1) yr(-1) in plant litter, reaching amounts comparable to those measured in remnant woodlands by 20 years and 36 years after reforestation respectively. Soil C was slower to increase, with increases seen only after 45 years, at which time stocks had not reached the amounts found in remnant woodlands. The amount of trees (tree density and basal area) was positively associated with the accumulation of carbon in aboveground biomass and litter. In contrast, changes to soil C were most strongly related to the productivity of the location (a forest productivity index and soil N content in the adjacent pasture). At 30 years, native mixed-species plantings had increased the stability of soil C stocks, with higher amounts of recalcitrant C and higher C:N ratios than their adjacent pastures. Reforestation with native mixed-species plantings did not significantly change the availability of macronutrients (N, K, Ca, Mg, P, and S) or micronutrients (Fe, B, Mn, Zn, and Cu), content of plant toxins (Al, Si), acidity, or salinity (Na, electrical conductivity) in the soil. In this medium rainfall area, native mixed-species plantings provided comparable rates of C sequestration to local production species, with the probable additional benefit of providing better quality habitat for native biota. These results demonstrate that reforestation using native mixed-species plantings is an effective alternative for carbon sequestration to standard monocultures of production species in medium rainfall areas of temperate continental climates, where they can effectively store C, convert C into stable pools and provide greater benefits for biodiversity. © 2014 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://eric.ed.gov/?q=Multiple+AND+sclerosis&pg=6&id=EJ810617','ERIC'); return false;" href="https://eric.ed.gov/?q=Multiple+AND+sclerosis&pg=6&id=EJ810617"><span>Naive CD8 T-Cells Initiate Spontaneous Autoimmunity to a Sequestered Model Antigen of the Central Nervous System</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.eric.ed.gov/ERICWebPortal/search/extended.jsp?_pageLabel=advanced">ERIC Educational Resources Information Center</a></p> <p>Na, Shin-Young; Cao, Yi; Toben, Catherine; Nitschke, Lars; Stadelmann, Christine; Gold, Ralf; Schimpl, Anneliese; Hunig, Thomas</p> <p>2008-01-01</p> <p>In multiple sclerosis, CD8 T-cells are thought play a key pathogenetic role, but mechanistic evidence from rodent models is limited. Here, we have tested the encephalitogenic potential of CD8 T-cells specific for the model antigen ovalbumin (OVA) sequestered in oligodendrocytes as a cytosolic molecule. We show that in these "ODC-OVA" mice, the…</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFMGC23J1223S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFMGC23J1223S"><span>Ice-Rich Yedoma Permafrost: A Synthesis of Circum-Arctic Distribution and Thickness</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Strauss, J.; Fedorov, A. N.; Fortier, D.; Froese, D. G.; Fuchs, M.; Grosse, G.; Günther, F.; Harden, J. W.; Hugelius, G.; Kanevskiy, M. Z.; Kholodov, A. L.; Kunitsky, V.; Laboor, S.; Lapointe Elmrabti, L.; Rivkina, E.; Robinson, J. E.; Schirrmeister, L.; Shmelev, D.; Shur, Y.; Spektor, V.; Ulrich, M.; Veremeeva, A.; Walter Anthony, K. M.; Zimov, S. A.</p> <p>2015-12-01</p> <p>Vast portions of Arctic and sub-Arctic Siberia, Alaska and the Yukon Territory are covered by ice-rich silts that are penetrated by large ice wedges, resulting from syngenetic sedimentation and freezing. Accompanied by wedge-ice growth, the sedimentation process was driven by cold continental climatic and environmental conditions in unglaciated regions during the late Pleistocene, inducing the accumulation of the unique Yedoma permafrost deposits up to 50 meter thick. Because of fast incorporation of organic material into permafrost during formation, Yedoma deposits include low-decomposed organic matter. Moreover, ice-rich permafrost deposits like Yedoma are especially prone to degradation triggered by climate changes or human activity. When Yedoma deposits degrade, large amounts of sequestered organic carbon as well as other nutrients are released and become part of active biogeochemical cycling. This could be of global significance for the climate warming, as increased permafrost thaw is likely to cause a positive feedback loop. Therefore, a detailed assessment of the Yedoma deposit volume is of importance to estimate its potential future climate response. Moreover, as a step beyond the objectives of this synthesis study, our coverage (see figure for the Yedoma domain) and thickness estimation will provide critical data to refine the Yedoma permafrost organic carbon inventory, which is assumed to have freeze-locked between 83±12 and 129±30 gigatonnes (Gt) of organic carbon. Hence, we here synthesize data on the circum-Arctic and sub-Arctic distribution and thickness of Yedoma permafrost (see figure for the Yedoma domain) in the framework of an Action Group funded by the International Permafrost Association (IPA). The quantification of the Yedoma coverage is conducted by the digitization of geomorphological and Quaternary geological maps. Further data on Yedoma thickness is contributed from boreholes and exposures reported in the scientific literature.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70024358','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70024358"><span>Seed chemistry of Sophora chrysophylla (mamane) in relation to diet of specialist avian seed predator Loxioides bailleui (palila) in Hawaii</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Banko, P.C.; Cipollini, M.L.; Breton, G.W.; Paulk, E.; Wink, M.; Izhaki, Ido</p> <p>2002-01-01</p> <p>This study describes the chemical ecology of a tritrophic interaction among species endemic to the island of Hawaii, USA: a tree (Sophora chrysophylla: mamane), an endangered bird (Loxioides bailleui; palila), and moth larvae (Cydia spp.). Palila and Cydia both specialize on the seed embryos of mamane but avoid eating the seed coats. Palila actively seek out and feed mamane embryos and Cydia larvae to their nestlings. Because mamane embryos contain potentially toxic levels of alkaloids, including broadly toxic quinolizidine alkaloids, and because insects often sequester alkaloids from their food plants, we focus on the questions of why palila forage upon mamane embryos and why they supplement their diet with Cydia larvae. Our data show that mamane embryos contain high amounts of potentially toxic alkaloids, but are well balanced nutritionally and contain lipids, carbohydrates, proteins, amino acids, and minerals at levels that are likely to be sufficient for maintenance and breeding. Mamane seed coats contain lower levels of alkaloids and nutrients, somewhat higher levels of phenolics, and much higher levels of nondigestible fiber. Taken together, these results suggest that palila have evolved tolerance to high levels of alkaloids and that they forage upon embryos primarily because of their availability in the habitat and high nutritional reward. Our data also suggest that Cydia are used by palila because they are readily accessible, nontoxic, and nutritious; the larvae apparently do not sequester alkaloids while feeding upon mamane seeds. Our results are interpreted with respect to the likelihood of current and historical coadaptive responses in this ecologically isolated and simplified island setting.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/16098186','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/16098186"><span>PA700, the regulatory complex of the 26S proteasome, interferes with alpha-synuclein assembly.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ghee, Medeva; Melki, Ronald; Michot, Nadine; Mallet, Jacques</p> <p>2005-08-01</p> <p>Parkinson's disease is characterized by the loss of dopaminergic neurons in the nigrostriatal pathway accompanied by the presence of intracellular cytoplasmic inclusions, termed Lewy bodies. Fibrillized alpha-synuclein forms the major component of Lewy bodies. We reported a specific interaction between rat alpha-synuclein and tat binding protein 1, a subunit of PA700, the regulatory complex of the 26S proteasome. It has been demonstrated that PA700 prevents the aggregation of misfolded, nonubiquinated substrates. In this study, we examine the effect of PA700 on the aggregation of wild-type and A53T mutant alpha-synuclein. PA700 inhibits both wild-type and A53T alpha-synuclein fibril formation as measured by Thioflavin T fluorescence. Using size exclusion chromatography, we present evidence for a stable PA700-alpha-synuclein complex. Sedimentation analyses reveal that PA700 sequesters alpha-synuclein in an assembly incompetent form. Analysis of the morphology of wild-type and A53T alpha-synuclein aggregates during the course of fibrillization by electron microscopy demonstrate the formation of amyloid-like fibrils. Secondary structure analyses of wild-type and A53T alpha-synuclein assembled in the presence of PA700 revealed a decrease in the overall amount of assembled alpha-synuclein with no significant change in protein conformation. Thus, PA700 acts on alpha-synuclein assembly and not on the structure of fibrils. We hypothesize that PA700 sequesters alpha-synuclein oligomeric species that are the precursors of the fibrillar form of the protein, thus preventing its assembly into fibrils.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/19259829','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/19259829"><span>Protective actions of the vesicular monoamine transporter 2 (VMAT2) in monoaminergic neurons.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Guillot, Thomas S; Miller, Gary W</p> <p>2009-04-01</p> <p>Vesicular monoamine transporters (VMATs) are responsible for the packaging of neurotransmitters such as dopamine, serotonin, norepinephrine, and epinephrine into synaptic vesicles. These proteins evolved from precursors in the major facilitator superfamily of transporters and are among the members of the toxin extruding antiporter family. While the primary function of VMATs is to sequester neurotransmitters within vesicles, they can also translocate toxicants away from cytosolic sites of action. In the case of dopamine, this dual role of VMAT2 is combined-dopamine is more readily oxidized in the cytosol where it can cause oxidative stress so packaging into vesicles serves two purposes: neurotransmission and neuroprotection. Furthermore, the deleterious effects of exogenous toxicants on dopamine neurons, such as MPTP, can be attenuated by VMAT2 activity. The active metabolite of MPTP can be kept within vesicles and prevented from disrupting mitochondrial function thereby sparing the dopamine neuron. The highly addictive drug methamphetamine is also neurotoxic to dopamine neurons by using dopamine itself to destroy the axon terminals. Methamphetamine interferes with vesicular sequestration and increases the production of dopamine, escalating the amount in the cytosol and leading to oxidative damage of terminal components. Vesicular transport seems to resist this process by sequestering much of the excess dopamine, which is illustrated by the enhanced methamphetamine neurotoxicity in VMAT2-deficient mice. It is increasingly evident that VMAT2 provides neuroprotection from both endogenous and exogenous toxicants and that while VMAT2 has been adapted by eukaryotes for synaptic transmission, it is derived from phylogenetically ancient proteins that originally evolved for the purpose of cellular protection.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26538594','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26538594"><span>Milkweed butterfly resistance to plant toxins is linked to sequestration, not coping with a toxic diet.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Petschenka, Georg; Agrawal, Anurag A</p> <p>2015-11-07</p> <p>Insect resistance to plant toxins is widely assumed to have evolved in response to using defended plants as a dietary resource. We tested this hypothesis in the milkweed butterflies (Danaini) which have progressively evolved higher levels of resistance to cardenolide toxins based on amino acid substitutions of their cellular sodium-potassium pump (Na(+)/K(+)-ATPase). Using chemical, physiological and caterpillar growth assays on diverse milkweeds (Asclepias spp.) and isolated cardenolides, we show that resistant Na(+)/K(+)-ATPases are not necessary to cope with dietary cardenolides. By contrast, sequestration of cardenolides in the body (as a defence against predators) is associated with the three levels of Na(+)/K(+)-ATPase resistance. To estimate the potential physiological burden of cardenolide sequestration without Na(+)/K(+)-ATPase adaptations, we applied haemolymph of sequestering species on isolated Na(+)/K(+)-ATPase of sequestering and non-sequestering species. Haemolymph cardenolides dramatically impair non-adapted Na(+)/K(+)-ATPase, but had systematically reduced effects on Na(+)/K(+)-ATPase of sequestering species. Our data indicate that major adaptations to plant toxins may be evolutionarily linked to sequestration, and may not necessarily be a means to eat toxic plants. Na(+)/K(+)-ATPase adaptations thus were a potential mechanism through which predators spurred the coevolutionary arms race between plants and insects. © 2015 The Author(s).</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_8");'>8</a></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li class="active"><span>10</span></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_10 --> <div id="page_11" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li class="active"><span>11</span></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="201"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4650158','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4650158"><span>Milkweed butterfly resistance to plant toxins is linked to sequestration, not coping with a toxic diet</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Petschenka, Georg; Agrawal, Anurag A.</p> <p>2015-01-01</p> <p>Insect resistance to plant toxins is widely assumed to have evolved in response to using defended plants as a dietary resource. We tested this hypothesis in the milkweed butterflies (Danaini) which have progressively evolved higher levels of resistance to cardenolide toxins based on amino acid substitutions of their cellular sodium–potassium pump (Na+/K+-ATPase). Using chemical, physiological and caterpillar growth assays on diverse milkweeds (Asclepias spp.) and isolated cardenolides, we show that resistant Na+/K+-ATPases are not necessary to cope with dietary cardenolides. By contrast, sequestration of cardenolides in the body (as a defence against predators) is associated with the three levels of Na+/K+-ATPase resistance. To estimate the potential physiological burden of cardenolide sequestration without Na+/K+-ATPase adaptations, we applied haemolymph of sequestering species on isolated Na+/K+-ATPase of sequestering and non-sequestering species. Haemolymph cardenolides dramatically impair non-adapted Na+/K+-ATPase, but had systematically reduced effects on Na+/K+-ATPase of sequestering species. Our data indicate that major adaptations to plant toxins may be evolutionarily linked to sequestration, and may not necessarily be a means to eat toxic plants. Na+/K+-ATPase adaptations thus were a potential mechanism through which predators spurred the coevolutionary arms race between plants and insects. PMID:26538594</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28545892','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28545892"><span>Technical feasibility and carbon footprint of biochar co-production with tomato plant residue.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Llorach-Massana, Pere; Lopez-Capel, Elisa; Peña, Javier; Rieradevall, Joan; Montero, Juan Ignacio; Puy, Neus</p> <p>2017-09-01</p> <p>World tomato production is in the increase, generating large amounts of organic agricultural waste, which are currently incinerated or composted, releasing CO 2 into the atmosphere. Organic waste is not only produced from conventional but also urban agricultural practices due recently gained popularity. An alternative to current waste management practices and carbon sequestration opportunity is the production of biochar (thermally converted biomass) from tomato plant residues and use as a soil amendment. To address the real contribution of biochar for greenhouse gas mitigation, it is necessary to assess the whole life cycle from the production of the tomato biomass feedstock to the actual distribution and utilisation of the biochar produced in a regional context. This study is the first step to determine the technical and environmental potential of producing biochar from tomato plant (Solanum lycopersicum arawak variety) waste biomass and utilisation as a soil amendment. The study includes the characterisation of tomato plant residue as biochar feedstock (cellulose, hemicellulose, lignin and metal content); feedstock thermal stability; and the carbon footprint of biochar production under urban agriculture at pilot and small-scale plant, and conventional agriculture at large-scale plant. Tomato plant residue is a potentially suitable biochar feedstock under current European Certification based on its lignin content (19.7%) and low metal concentration. Biomass conversion yields of over 40%, 50% carbon stabilization and low pyrolysis temperature conditions (350-400°C) would be required for biochar production to sequester carbon under urban pilot scale conditions; while large-scale biochar production from conventional agricultural practices have not the potential to sequestrate carbon because its logistics, which could be improved. Therefore, the diversion of tomato biomass waste residue from incineration or composting to biochar production for use as a soil amendment would environmentally be beneficial, but only if high biochar yields could be produced. Copyright © 2017 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/19587681','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/19587681"><span>The late Precambrian greening of the Earth.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Knauth, L Paul; Kennedy, Martin J</p> <p>2009-08-06</p> <p>Many aspects of the carbon cycle can be assessed from temporal changes in the (13)C/(12)C ratio of oceanic bicarbonate. (13)C/(12)C can temporarily rise when large amounts of (13)C-depleted photosynthetic organic matter are buried at enhanced rates, and can decrease if phytomass is rapidly oxidized or if low (13)C is rapidly released from methane clathrates. Assuming that variations of the marine (13)C/(12)C ratio are directly recorded in carbonate rocks, thousands of carbon isotope analyses of late Precambrian examples have been published to correlate these otherwise undatable strata and to document perturbations to the carbon cycle just before the great expansion of metazoan life. Low (13)C/(12)C in some Neoproterozoic carbonates is considered evidence of carbon cycle perturbations unique to the Precambrian. These include complete oxidation of all organic matter in the ocean and complete productivity collapse such that low-(13)C/(12)C hydrothermal CO(2) becomes the main input of carbon. Here we compile all published oxygen and carbon isotope data for Neoproterozoic marine carbonates, and consider them in terms of processes known to alter the isotopic composition during transformation of the initial precipitate into limestone/dolostone. We show that the combined oxygen and carbon isotope systematics are identical to those of well-understood Phanerozoic examples that lithified in coastal pore fluids, receiving a large groundwater influx of photosynthetic carbon from terrestrial phytomass. Rather than being perturbations to the carbon cycle, widely reported decreases in (13)C/(12)C in Neoproterozoic carbonates are more easily interpreted in the same way as is done for Phanerozoic examples. This influx of terrestrial carbon is not apparent in carbonates older than approximately 850 Myr, so we infer an explosion of photosynthesizing communities on late Precambrian land surfaces. As a result, biotically enhanced weathering generated carbon-bearing soils on a large scale and their detrital sedimentation sequestered carbon. This facilitated a rise in O(2) necessary for the expansion of multicellular life.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/237359','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/237359"><span>PCR detection of groundwater bacteria associated with colloidal transport</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Cruz-Perez, P.; Stetzenbach, L.D.; Alvarez, A.J.</p> <p>1996-02-29</p> <p>Colloidal transport may increase the amount of contaminant material than that which could be transported by water flow alone. The role of colloids in groundwater contaminant transport is complicated and may involve many different processes, including sorption of elements onto colloidal particles, coagulation/dissolution, adsorption onto solid surfaces, filtration, and migration. Bacteria are known to concentrate minerals and influence the transport of compounds in aqueous environments and may also serve as organic colloids, thereby influencing subsurface transport of radionuclides and other contaminants. The initial phase of the project consisted of assembling a list of bacteria capable of sequestering or facilitating mineralmore » transport. The development and optimization of the PCR amplification assay for the detection of the organisms of interest, and the examination of regional groundwaters for those organisms, are presented for subsequent research.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5312858','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5312858"><span>New Insights into Understanding Irreversible and Reversible Lithium Storage within SiOC and SiCN Ceramics</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Graczyk-Zajac, Magdalena; Reinold, Lukas Mirko; Kaspar, Jan; Sasikumar, Pradeep Vallachira Warriam; Soraru, Gian-Domenico; Riedel, Ralf</p> <p>2015-01-01</p> <p>Within this work we define structural properties of the silicon carbonitride (SiCN) and silicon oxycarbide (SiOC) ceramics which determine the reversible and irreversible lithium storage capacities, long cycling stability and define the major differences in the lithium storage in SiCN and SiOC. For both ceramics, we correlate the first cycle lithiation or delithiation capacity and cycling stability with the amount of SiCN/SiOC matrix or free carbon phase, respectively. The first cycle lithiation and delithiation capacities of SiOC materials do not depend on the amount of free carbon, while for SiCN the capacity increases with the amount of carbon to reach a threshold value at ~50% of carbon phase. Replacing oxygen with nitrogen renders the mixed bond Si-tetrahedra unable to sequester lithium. Lithium is more attracted by oxygen in the SiOC network due to the more ionic character of Si-O bonds. This brings about very high initial lithiation capacities, even at low carbon content. If oxygen is replaced by nitrogen, the ceramic network becomes less attractive for lithium ions due to the more covalent character of Si-N bonds and lower electron density on the nitrogen atom. This explains the significant difference in electrochemical behavior which is observed for carbon-poor SiCN and SiOC materials. PMID:28347008</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3843837','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3843837"><span>Plastid-bearing sea slugs fix CO2 in the light but do not require photosynthesis to survive</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Christa, Gregor; Zimorski, Verena; Woehle, Christian; Tielens, Aloysius G. M.; Wägele, Heike; Martin, William F.; Gould, Sven B.</p> <p>2014-01-01</p> <p>Several sacoglossan sea slugs (Plakobranchoidea) feed upon plastids of large unicellular algae. Four species—called long-term retention (LtR) species—are known to sequester ingested plastids within specialized cells of the digestive gland. There, the stolen plastids (kleptoplasts) remain photosynthetically active for several months, during which time LtR species can survive without additional food uptake. Kleptoplast longevity has long been puzzling, because the slugs do not sequester algal nuclei that could support photosystem maintenance. It is widely assumed that the slugs survive starvation by means of kleptoplast photosynthesis, yet direct evidence to support that view is lacking. We show that two LtR plakobranchids, Elysia timida and Plakobranchus ocellatus, incorporate 14CO2 into acid-stable products 60- and 64-fold more rapidly in the light than in the dark, respectively. Despite this light-dependent CO2 fixation ability, light is, surprisingly, not essential for the slugs to survive starvation. LtR animals survived several months of starvation (i) in complete darkness and (ii) in the light in the presence of the photosynthesis inhibitor monolinuron, all while not losing weight faster than the control animals. Contrary to current views, sacoglossan kleptoplasts seem to be slowly digested food reserves, not a source of solar power. PMID:24258718</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=555531','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=555531"><span>Engineering of vault nanocapsules with enzymatic and fluorescent properties</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Kickhoefer, Valerie A.; Garcia, Yvette; Mikyas, Yeshi; Johansson, Erik; Zhou, Jing C.; Raval-Fernandes, Sujna; Minoofar, Payam; Zink, Jeffrey I.; Dunn, Bruce; Stewart, Phoebe L.; Rome, Leonard H.</p> <p>2005-01-01</p> <p>One of the central issues facing the emerging field of nanotechnology is cellular compatibility. Nanoparticles have been proposed for diagnostic and therapeutic applications, including drug delivery, gene therapy, biological sensors, and controlled catalysis. Viruses, liposomes, peptides, and synthetic and natural polymers have been engineered for these applications, yet significant limitations continue to prevent their use. Avoidance of the body's natural immune system, lack of targeting specificity, and the inability to control packaging and release are remaining obstacles. We have explored the use of a naturally occurring cellular nanoparticle known as the vault, which is named for its morphology with multiple arches reminiscent of cathedral ceilings. Vaults are 13-MDa ribonucleoprotein particles with an internal cavity large enough to sequester hundreds of proteins. Here, we report a strategy to target and sequester biologically active materials within the vault cavity. Attachment of a vault-targeting peptide to two proteins, luciferase and a variant of GFP, resulted in their sequestration within the vault cavity. The targeted proteins confer enzymatic and fluorescent properties on the recombinant vaults, both of which can be detected by their emission of light. The modified vaults are compatible with living cells. The ability to engineer vault particles with designed properties and functionalities represents an important step toward development of a biocompatible nanocapsule. PMID:15753293</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/15753293','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/15753293"><span>Engineering of vault nanocapsules with enzymatic and fluorescent properties.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Kickhoefer, Valerie A; Garcia, Yvette; Mikyas, Yeshi; Johansson, Erik; Zhou, Jing C; Raval-Fernandes, Sujna; Minoofar, Payam; Zink, Jeffrey I; Dunn, Bruce; Stewart, Phoebe L; Rome, Leonard H</p> <p>2005-03-22</p> <p>One of the central issues facing the emerging field of nanotechnology is cellular compatibility. Nanoparticles have been proposed for diagnostic and therapeutic applications, including drug delivery, gene therapy, biological sensors, and controlled catalysis. Viruses, liposomes, peptides, and synthetic and natural polymers have been engineered for these applications, yet significant limitations continue to prevent their use. Avoidance of the body's natural immune system, lack of targeting specificity, and the inability to control packaging and release are remaining obstacles. We have explored the use of a naturally occurring cellular nanoparticle known as the vault, which is named for its morphology with multiple arches reminiscent of cathedral ceilings. Vaults are 13-MDa ribonucleoprotein particles with an internal cavity large enough to sequester hundreds of proteins. Here, we report a strategy to target and sequester biologically active materials within the vault cavity. Attachment of a vault-targeting peptide to two proteins, luciferase and a variant of GFP, resulted in their sequestration within the vault cavity. The targeted proteins confer enzymatic and fluorescent properties on the recombinant vaults, both of which can be detected by their emission of light. The modified vaults are compatible with living cells. The ability to engineer vault particles with designed properties and functionalities represents an important step toward development of a biocompatible nanocapsule.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/937184','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/937184"><span>Sequestering the Gravitino: Neutralino Dark Matter in Gauge Mediation</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Craig, Nathaniel J.; /Stanford U., Dept. Phys.; Green, Daniel</p> <p>2008-08-15</p> <p>In conventional models of gauge-mediated supersymmetry breaking, the lightest supersymmetric particle (LSP) is invariably the gravitino. However, if the supersymmetry breaking sector is strongly coupled, conformal sequestering may raise the mass of the gravitino relative to the remaining soft supersymmetry-breaking masses. In this letter, we demonstrate that such conformal dynamics in gauge-mediated theories may give rise to satisfactory neutralino dark matter while simultaneously solving the flavor and {mu}/B{mu} problems.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.dtic.mil/docs/citations/ADA241688','DTIC-ST'); return false;" href="http://www.dtic.mil/docs/citations/ADA241688"><span>Pharmacokinetic Models for the Elimination of Drinking Water Contaminants from the Body,</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.dtic.mil/">DTIC Science & Technology</a></p> <p></p> <p>1990-03-01</p> <p>that are sequestered in the bones (lead, barium), in certain soft tissues such as the kidney ( cadmium ), and in the adipose tissue (DDT...slow" component (sequestered in 3 bone or in adipose tissue ). Finally, much more attention must be given to differences among I individuals and among...lead from bone, effectively reducing the half-life. Fasting or starvation can mobilize toxicants 3 stored in adipose tissue . Competition for enzyme</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27795274','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27795274"><span>Genome Sequence of Carbon Dioxide-Sequestering Serratia sp. Strain ISTD04 Isolated from Marble Mining Rocks.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Kumar, Manish; Gazara, Rajesh Kumar; Verma, Sandhya; Kumar, Madan; Verma, Praveen Kumar; Thakur, Indu Shekhar</p> <p>2016-10-20</p> <p>The Serratia sp. strain ISTD04 has been identified as a carbon dioxide (CO 2 )-sequestering bacterium isolated from marble mining rocks in the Umra area, Rajasthan, India. This strain grows chemolithotrophically on media that contain sodium bicarbonate (NaHCO 3 ) as the sole carbon source. Here, we report the genome sequence of 5.07 Mb Serratia sp. ISTD04. Copyright © 2016 Kumar et al.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/pages/biblio/1424008-etude-global-vacuum-energy-sequester','SCIGOV-DOEP'); return false;" href="https://www.osti.gov/pages/biblio/1424008-etude-global-vacuum-energy-sequester"><span>An étude on global vacuum energy sequester</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/pages">DOE PAGES</a></p> <p>D’Amico, Guido; Kaloper, Nemanja; Padilla, Antonio; ...</p> <p>2017-09-18</p> <p>Recently two of the authors proposed a mechanism of vacuum energy sequester as a means of protecting the observable cosmological constant from quantum radiative corrections. The original proposal was based on using global Lagrange multipliers, but later a local formulation was provided. Subsequently other interesting claims of a different non-local approach to the cosmological constant problem were made, based again on global Lagrange multipliers. We examine some of these proposals and find their mutual relationship. We explain that the proposals which do not treat the cosmological constant counterterm as a dynamical variable require fine tunings to have acceptable solutions. Furthermore,more » the counterterm often needs to be retuned at every order in the loop expansion to cancel the radiative corrections to the cosmological constant, just like in standard GR. These observations are an important reminder of just how the proposal of vacuum energy sequester avoids such problems.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=25157','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=25157"><span>Dissociation of the Tubulin-sequestering and Microtubule Catastrophe-promoting Activities of Oncoprotein 18/Stathmin</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Howell, Bonnie; Larsson, Niklas; Gullberg, Martin; Cassimeris, Lynne</p> <p>1999-01-01</p> <p>Oncoprotein 18/stathmin (Op18) has been identified recently as a protein that destabilizes microtubules, but the mechanism of destabilization is currently controversial. Based on in vitro microtubule assembly assays, evidence has been presented supporting conflicting destabilization models of either tubulin sequestration or promotion of microtubule catastrophes. We found that Op18 can destabilize microtubules by both of these mechanisms and that these activities can be dissociated by changing pH. At pH 6.8, Op18 slowed microtubule elongation and increased catastrophes at both plus and minus ends, consistent with a tubulin-sequestering activity. In contrast, at pH 7.5, Op18 promoted microtubule catastrophes, particularly at plus ends, with little effect on elongation rates at either microtubule end. Dissociation of tubulin-sequestering and catastrophe-promoting activities of Op18 was further demonstrated by analysis of truncated Op18 derivatives. Lack of a C-terminal region of Op18 (aa 100–147) resulted in a truncated protein that lost sequestering activity at pH 6.8 but retained catastrophe-promoting activity. In contrast, lack of an N-terminal region of Op18 (aa 5–25) resulted in a truncated protein that still sequestered tubulin at pH 6.8 but was unable to promote catastrophes at pH 7.5. At pH 6.8, both the full length and the N-terminal–truncated Op18 bound tubulin, whereas truncation at the C-terminus resulted in a pronounced decrease in tubulin binding. Based on these results, and a previous study documenting a pH-dependent change in binding affinity between Op18 and tubulin, it is likely that tubulin sequestering observed at lower pH resulted from the relatively tight interaction between Op18 and tubulin and that this tight binding requires the C-terminus of Op18; however, under conditions in which Op18 binds weakly to tubulin (pH 7.5), Op18 stimulated catastrophes without altering tubulin subunit association or dissociation rates, and Op18 did not depolymerize microtubules capped with guanylyl (α, β)-methylene diphosphonate–tubulin subunits. We hypothesize that weak binding between Op18 and tubulin results in free Op18, which is available to interact with microtubule ends and thereby promote catastrophes by a mechanism that likely involves GTP hydrolysis. PMID:9880330</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70129208','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70129208"><span>Geochemical monitoring for potential environmental impacts of geologic sequestration of CO2</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Kharaka, Yousif K.; Cole, David R.; Thordsen, James J.; Gans, Kathleen D.; Thomas, Randal B.</p> <p>2013-01-01</p> <p>Carbon dioxide sequestration is now considered an important component of the portfolio of options for reducing greenhouse gas emissions to stabilize their atmospheric levels at values that would limit global temperature increases to the target of 2 °C by the end of the century (Pacala and Socolow 2004; IPCC 2005, 2007; Benson and Cook 2005; Benson and Cole 2008; IEA 2012; Romanak et al. 2013). Increased anthropogenic emissions of CO2 have raised its atmospheric concentrations from about 280 ppmv during pre-industrial times to ~400 ppmv today, and based on several defined scenarios, CO2 concentrations are projected to increase to values as high as 1100 ppmv by 2100 (White et al. 2003; IPCC 2005, 2007; EIA 2012; Global CCS Institute 2012). An atmospheric CO2 concentration of 450 ppmv is generally the accepted level that is needed to limit global temperature increases to the target of 2 °C by the end of the century. This temperature limit likely would moderate the adverse effects related to climate change that could include sea-level rise from the melting of alpine glaciers and continental ice sheets and from the ocean warming; increased frequency and intensity of wildfires, floods, droughts, and tropical storms; and changes in the amount, timing, and distribution of rain, snow, and runoff (IPCC 2007; Sundquist et al. 2009; IEA 2012). Rising atmospheric CO2 concentrations are also increasing the amount of CO2 dissolved in ocean water lowering its pH from 8.1 to 8.0, with potentially disruptive effects on coral reefs, plankton and marine ecosystems (Adams and Caldeira 2008; Schrag 2009; Sundquist et al. 2009). Sedimentary basins in general and deep saline aquifers in particular are being investigated as possible repositories for the large volumes of anthropogenic CO2 that must be sequestered to mitigate global warming and related climate changes (Hitchon 1996; Benson and Cole 2008; Verma and Warwick 2011).</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25265095','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25265095"><span>Carbon sequestration efficiency of organic amendments in a long-term experiment on a vertisol in Huang-Huai-Hai Plain, China.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Hua, Keke; Wang, Daozhong; Guo, Xisheng; Guo, Zibin</p> <p>2014-01-01</p> <p>Soil organic carbon (SOC) sequestration is important for improving soil fertility of cropland and for the mitigation of greenhouse gas emissions to the atmosphere. The efficiency of SOC sequestration depends on the quantity and quality of the organic matter, soil type, and climate. Little is known about the SOC sequestration efficiency of organic amendments in Vertisols. Thus, we conducted the research based on 29 years (1982-2011) of long-term fertilization experiment with a no fertilizer control and five fertilization regimes: CK (control, no fertilizer), NPK (mineral NPK fertilizers alone), NPK+1/2W (mineral NPK fertilizers combined with half the amount of wheat straw), NPK+W (mineral NPK fertilizers combined with full the amount of wheat straw), NPK+PM (mineral NPK fertilizers combined with pig manure) and NPK+CM (mineral NPK fertilizers combined cattle manure). Total mean annual C inputs were 0.45, 1.55, 2.66, 3.71, 4.68 and 6.56 ton/ha/yr for CK, NPK, NPKW1/2, NPKW, NPKPM and NPKCM, respectively. Mean SOC sequestration rate was 0.20 ton/ha/yr in the NPK treatment, and 0.39, 0.50, 0.51 and 0.97 ton/ha/yr in the NPKW1/2, NPKW, NPKPM, and NPKCM treatments, respectively. A linear relationship was observed between annual C input and SOC sequestration rate (SOCsequestration rate  = 0.16 Cinput -0.10, R = 0.95, P<0.01), suggesting a C sequestration efficiency of 16%. The Vertisol required an annual C input of 0.63 ton/ha/yr to maintain the initial SOC level. Moreover, the C sequestration efficiencies of wheat straw, pig manure and cattle manure were 17%, 11% and 17%, respectively. The results indicate that the Vertisol has a large potential to sequester SOC with a high efficiency, and applying cattle manure or wheat straw is a recommendable SOC sequestration practice in Vertisols.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4180924','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4180924"><span>Carbon Sequestration Efficiency of Organic Amendments in a Long-Term Experiment on a Vertisol in Huang-Huai-Hai Plain, China</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Hua, Keke; Wang, Daozhong; Guo, Xisheng; Guo, Zibin</p> <p>2014-01-01</p> <p>Soil organic carbon (SOC) sequestration is important for improving soil fertility of cropland and for the mitigation of greenhouse gas emissions to the atmosphere. The efficiency of SOC sequestration depends on the quantity and quality of the organic matter, soil type, and climate. Little is known about the SOC sequestration efficiency of organic amendments in Vertisols. Thus, we conducted the research based on 29 years (1982–2011) of long-term fertilization experiment with a no fertilizer control and five fertilization regimes: CK (control, no fertilizer), NPK (mineral NPK fertilizers alone), NPK+1/2W (mineral NPK fertilizers combined with half the amount of wheat straw), NPK+W (mineral NPK fertilizers combined with full the amount of wheat straw), NPK+PM (mineral NPK fertilizers combined with pig manure) and NPK+CM (mineral NPK fertilizers combined cattle manure). Total mean annual C inputs were 0.45, 1.55, 2.66, 3.71, 4.68 and 6.56 ton/ha/yr for CK, NPK, NPKW1/2, NPKW, NPKPM and NPKCM, respectively. Mean SOC sequestration rate was 0.20 ton/ha/yr in the NPK treatment, and 0.39, 0.50, 0.51 and 0.97 ton/ha/yr in the NPKW1/2, NPKW, NPKPM, and NPKCM treatments, respectively. A linear relationship was observed between annual C input and SOC sequestration rate (SOCsequestration rate  = 0.16 Cinput –0.10, R = 0.95, P<0.01), suggesting a C sequestration efficiency of 16%. The Vertisol required an annual C input of 0.63 ton/ha/yr to maintain the initial SOC level. Moreover, the C sequestration efficiencies of wheat straw, pig manure and cattle manure were 17%, 11% and 17%, respectively. The results indicate that the Vertisol has a large potential to sequester SOC with a high efficiency, and applying cattle manure or wheat straw is a recommendable SOC sequestration practice in Vertisols. PMID:25265095</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26471069','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26471069"><span>Siderophore production and the evolution of investment in a public good: An adaptive dynamics approach to kin selection.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Lee, William; van Baalen, Minus; Jansen, Vincent A A</p> <p>2016-01-07</p> <p>Like many other bacteria, Pseudomonas aeruginosa sequesters iron from the environment through the secretion, and subsequent uptake, of iron-binding molecules. As these molecules can be taken up by other bacteria in the population than those who secreted them, this is a form of cooperation through a public good. Traditionally, this problem has been studied by comparing the relative fitnesses of siderophore-producing and non-producing strains, but this gives no information about the fate of strains that do produce intermediate amounts of siderophores. Here, we investigate theoretically how the amount invested in this form of cooperation evolves. We use a mechanistic description of the laboratory protocols used in experimental evolution studies to describe the competition and cooperation of the bacteria. From this dynamical model we derive the fitness following the adaptive dynamics method. The results show how selection is driven by local siderophore production and local competition. Because siderophore production reduces the growth rate, local competition decreases with the degree of relatedness (which is a dynamical variable in our model). Our model is not restricted to the analysis of small phenotypic differences and allows for theoretical exploration of the effects of large phenotypic differences between cooperators and cheats. We predict that an intermediate ESS level of cooperation (molecule production) should exist. The adaptive dynamics approach allows us to assess evolutionary stability, which is often not possible in other kin-selection models. We found that selection can lead to an intermediate strategy which in our model is always evolutionarily stable, yet can allow invasion of strategies that are much more cooperative. Our model describes the evolution of a public good in the context of the ecology of the microorganism, which allows us to relate the extent of production of the public good to the details of the interactions. Copyright © 2015 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.dtic.mil/docs/citations/ADA448598','DTIC-ST'); return false;" href="http://www.dtic.mil/docs/citations/ADA448598"><span>The National Shipbuilding Research Program. Trailer Mounted Water Recovery and Reuse System</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.dtic.mil/">DTIC Science & Technology</a></p> <p></p> <p>2000-11-30</p> <p>surfactants, and stabilize oil emulsions. • Sequestering or chelating agents bind problematic ions such as calcium or iron, which tend to form deposits on...cleaned parts. • Wetting/emulsifying agents (surfactants) help remove oil from dirty parts and stabilize the removed oil, preventing it from redepositing...neutralized; • The metal-loading can overcome the sequestering agents ’ capacity to keep the metals in solution; and • Oil and grease, if held in the emulsified</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/1010957','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/1010957"><span></span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Doug Cathro</p> <p></p> <p>The Lake Charles CCS Project is a large-scale industrial carbon capture and sequestration (CCS) project which will demonstrate advanced technologies that capture and sequester carbon dioxide (CO{sub 2}) emissions from industrial sources into underground formations. Specifically the Lake Charles CCS Project will accelerate commercialization of large-scale CO{sub 2} storage from industrial sources by leveraging synergy between a proposed petroleum coke to chemicals plant (the LCC Gasification Project) and the largest integrated anthropogenic CO{sub 2} capture, transport, and monitored sequestration program in the U.S. Gulf Coast Region. The Lake Charles CCS Project will promote the expansion of EOR in Texas andmore » Louisiana and supply greater energy security by expanding domestic energy supplies. The capture, compression, pipeline, injection, and monitoring infrastructure will continue to sequester CO{sub 2} for many years after the completion of the term of the DOE agreement. The objectives of this project are expected to be fulfilled by working through two distinct phases. The overall objective of Phase 1 was to develop a fully definitive project basis for a competitive Renewal Application process to proceed into Phase 2 - Design, Construction and Operations. Phase 1 includes the studies attached hereto that will establish: the engineering design basis for the capture, compression and transportation of CO{sub 2} from the LCC Gasification Project, and the criteria and specifications for a monitoring, verification and accounting (MVA) plan at the Hastings oil field in Texas. The overall objective of Phase 2, provided a successful competitive down-selection, is to execute design, construction and operations of three capital projects: (1) the CO{sub 2} capture and compression equipment, (2) a Connector Pipeline from the LLC Gasification Project to the Green Pipeline owned by Denbury and an affiliate of Denbury, and (3) a comprehensive MVA system at the Hastings oil field.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1054257','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1054257"><span>Biochemistry of Fern Spore Germination: Globulin Storage Proteins in Matteuccia struthiopteris L. 1</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Templeman, Thomas S.; DeMaggio, Augustus E.; Stetler, David A.</p> <p>1987-01-01</p> <p>Two globulin storage proteins have been identified in spores of the ostrich fern, Matteuccia struthiopteris (L.) Todaro. The two proteins comprise a significant amount of the total spore protein, are predominantly salt-soluble, and can be extracted by other solvents to a limited extent. The large 11.3 Svedberg unit (S) globulin is composed of five polypeptides with molecular weights of 21,000, 22,000, 24,000, 28,000 and 30,000. Each polypeptide has several isoelectric point (pI) variants between pH 5 and 7. The small 2.2S storage protein has a pI > 10.5 and is composed of at least two major polypeptides of 6,000 and 14,000 Mr. The amino acid composition of both storage proteins reveals that the 11.3S protein is particularly rich in aspartic and glutamic acid, while the 2.2S protein has few acidic amino acids. During imbibition and germination the globulin fraction declines rapidly, with a corresponding degradation of individual polypeptides of each protein. Polyclonal antibodies against each of the two proteins were produced and used for immunolocalization to determine the site of storage protein deposition within the quiescent spore. The proteins were sequestered in protein bodies of 2 to 10 micrometers, that are morphologically similar to those found in the seeds of flowering plants. The results suggest that spore globulins are biochemically similar to seed globulins, especially those found in some cruciferous seeds. Images Fig. 6 Fig. 7 Fig. 8 Fig. 9 PMID:16665699</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li class="active"><span>11</span></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_11 --> <div id="page_12" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li class="active"><span>12</span></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="221"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2003CRGeo.335..611J','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2003CRGeo.335..611J"><span>Potentiel des méthodes de séparation et stockage du CO2 dans la lutte contre l'effet de serreThe role of CO2 capture and sequestration in mitigation of climate change</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Jean-Baptiste, Philippe; Ducroux, René</p> <p>2003-06-01</p> <p>Increasing atmospheric level of greenhouse gases are causing global warming and putting at risk the global climate system. The main anthropogenic greenhouse gas is CO 2. Technical solutions exist to reduce CO 2 emission and stabilise atmospheric CO 2 concentration, including energy saving and energy efficiency, switch to lower carbon content fuels like natural gas and to energy sources that operate with zero CO 2 emissions such as renewable or nuclear energy, enhance the natural sinks for CO 2 (forests, soils, etc.), and last but not least, sequester CO 2 from fossil fuels combustion. The purpose of this paper is to provide an overview of the technology and cost for capture and storage of CO 2. Some of the factors that will influence application, including environmental impact, cost and efficiency, are also discussed. Capturing CO 2 and storing it in underground geological reservoirs appears as the best environmentally acceptable option. It can be done with existing technology; however, substantial R&D is needed to improve available technology and to lower the cost. Applicable to large CO 2 emitting industrial facilities such as power plants, cement factories, steel industry, etc., which amount to more than 30% of the global anthropogenic CO 2 emission, it represents a valuable tool in the battle against global warming. To cite this article: P. Jean-Baptiste, R. Ducroux, C. R. Geoscience 335 (2003).</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27453949','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27453949"><span>The O2-assisted Al/CO2 electrochemical cell: A system for CO2 capture/conversion and electric power generation.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Al Sadat, Wajdi I; Archer, Lynden A</p> <p>2016-07-01</p> <p>Economical and efficient carbon capture, utilization, and sequestration technologies are a requirement for successful implementation of global action plans to reduce carbon emissions and to mitigate climate change. These technologies are also essential for longer-term use of fossil fuels while reducing the associated carbon footprint. We demonstrate an O2-assisted Al/CO2 electrochemical cell as a new approach to sequester CO2 emissions and, at the same time, to generate substantial amounts of electrical energy. We report on the fundamental principles that guide operations of these cells using multiple intrusive electrochemical and physical analytical methods, including chronopotentiometry, cyclic voltammetry, direct analysis in real-time mass spectrometry, energy-dispersive x-ray spectroscopy, x-ray photoelectron spectroscopy, and coupled thermogravimetric analysis-Fourier transform infrared spectroscopy. On this basis, we demonstrate that an electrochemical cell that uses metallic aluminum as anode and a carbon dioxide/oxygen gas mixture as the active material in the cathode provides a path toward electrochemical generation of a valuable (C2) species and electrical energy. Specifically, we show that the cell first reduces O2 at the cathode to form superoxide intermediates. Chemical reaction of the superoxide with CO2 sequesters the CO2 in the form of aluminum oxalate, Al2(C2O4)3, as the dominant product. On the basis of an analysis of the overall CO2 footprint, which considers emissions associated with the production of the aluminum anode and the CO2 captured/abated by the Al/CO2-O2 electrochemical cell, we conclude that the proposed process offers an important strategy for net reduction of CO2 emissions.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29938851','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29938851"><span>Comparison of sample preparation techniques and data analysis for the LC-MS/MS-based identification of proteins in human follicular fluid.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Lehmann, Roland; Schmidt, André; Pastuschek, Jana; Müller, Mario M; Fritzsche, Andreas; Dieterle, Stefan; Greb, Robert R; Markert, Udo R; Slevogt, Hortense</p> <p>2018-06-25</p> <p>The proteomic analysis of complex body fluids by liquid chromatography tandem mass spectrometry (LC-MS/MS) analysis requires the selection of suitable sample preparation techniques and optimal parameter settings in data analysis software packages to obtain reliable results. Proteomic analysis of follicular fluid, as a representative of a complex body fluid similar to serum or plasma, is difficult as it contains a vast amount of high abundant proteins and a variety of proteins with different concentrations. However, the accessibility of this complex body fluid for LC-MS/MS analysis is an opportunity to gain insights into the status, the composition of fertility-relevant proteins including immunological factors or for the discovery of new diagnostic and prognostic markers for, for example, the treatment of infertility. In this study, we compared different sample preparation methods (FASP, eFASP and in-solution digestion) and three different data analysis software packages (Proteome Discoverer with SEQUEST, Mascot and MaxQuant with Andromeda) combined with semi- and full-tryptic databank search options to obtain a maximum coverage of the follicular fluid proteome. We found that the most comprehensive proteome coverage is achieved by the eFASP sample preparation method using SDS in the initial denaturing step and the SEQUEST-based semi-tryptic data analysis. In conclusion, we have developed a fractionation-free methodical workflow for in depth LC-MS/MS-based analysis for the standardized investigation of human follicle fluid as an important representative of a complex body fluid. Taken together, we were able to identify a total of 1392 proteins in follicular fluid. © 2018 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70029177','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70029177"><span>Ferric iron-bearing sediments as a mineral trap for CO2 sequestration: Iron reduction using sulfur-bearing waste gas</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Palandri, J.L.; Kharaka, Y.K.</p> <p>2005-01-01</p> <p>We present a novel method for geologic sequestration of anthropogenic CO2 in ferrous carbonate, using ferric iron present in widespread redbeds and other sediments. Iron can be reduced by SO2 that is commonly a component of flue gas produced by combustion of fossil fuel, or by adding SO2 or H2S derived from other industrial processes to the injected waste gas stream. Equilibrium and kinetically controlled geochemical simulations at 120 bar and 50 and 100 ??C with SO2 or H2S show that iron can be transformed almost entirely to siderite thereby trapping CO2, and simultaneously, that sulfur can be converted predominantly to dissolved sulfate. If there is an insufficient amount of sulfur-bearing gas relative to CO2 as for typical flue gas, then some of the iron is not reduced, and some of the CO2 is not sequestered. If there is an excess of sulfur-bearing gas, then complete iron reduction is ensured, and some of the iron precipitates as pyrite or other solid iron sulfide, depending on their relative precipitation kinetics. Gas mixtures with insufficient sulfur relative to CO2 can be used in sediments containing Ca, Mg, or other divalent metals capable of precipitating carbonate minerals. For quartz arenite with an initial porosity of 21% and containing 0.25 wt.% Fe2O3, approximately 0.7 g of CO2 is sequestered per kg of rock, and the porosity decrease is less than 0.03%. Sequestration of CO2 using ferric iron has the advantage of disposing of SO2 that may already be present in the combustion gas. ?? 2005 Published by Elsevier B.V.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70174832','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70174832"><span>Estimating carbon sequestration in the piedmont ecoregion of the United States from 1971 to 2010</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Liu, Jinxun; Sleeter, Benjamin M.; Zhu, Zhiliang; Heath, Linda S.; Tan, Zhengxi; Wilson, Tamara; Sherba, Jason T.; Zhou, Decheng</p> <p>2016-01-01</p> <p>Background: Human activities have diverse and profound impacts on ecosystem carbon cycles. The Piedmont ecoregion in the eastern United States has undergone significant land use and land cover change in the past few decades. The purpose of this study was to use newly available land use and land cover change data to quantify carbon changes within the ecoregion. Land use and land cover change data (60-m spatial resolution) derived from sequential remotely sensed Landsat imagery were used to generate 960-m resolution land cover change maps for the Piedmont ecoregion. These maps were used in the Integrated Biosphere Simulator (IBIS) to simulate ecosystem carbon stock and flux changes from 1971 to 2010. Results: Results show that land use change, especially urbanization and forest harvest had significant impacts on carbon sources and sinks. From 1971 to 2010, forest ecosystems sequestered 0.25 Mg C ha−1 yr−1, while agricultural ecosystems sequestered 0.03 Mg C ha−1 yr−1. The total ecosystem C stock increased from 2271 Tg C in 1971 to 2402 Tg C in 2010, with an annual average increase of 3.3 Tg C yr−1. Conclusions: Terrestrial lands in the Piedmont ecoregion were estimated to be weak net carbon sink during the study period. The major factors contributing to the carbon sink were forest growth and afforestation; the major factors contributing to terrestrial emissions were human induced land cover change, especially urbanization and forest harvest. An additional amount of carbon continues to be stored in harvested wood products. If this pool were included the carbon sink would be stronger. Keywords: Land-use change, Carbon change, Piedmont ecoregion, IBIS model</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4956394','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4956394"><span>The O2-assisted Al/CO2 electrochemical cell: A system for CO2 capture/conversion and electric power generation</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Al Sadat, Wajdi I.; Archer, Lynden A.</p> <p>2016-01-01</p> <p>Economical and efficient carbon capture, utilization, and sequestration technologies are a requirement for successful implementation of global action plans to reduce carbon emissions and to mitigate climate change. These technologies are also essential for longer-term use of fossil fuels while reducing the associated carbon footprint. We demonstrate an O2-assisted Al/CO2 electrochemical cell as a new approach to sequester CO2 emissions and, at the same time, to generate substantial amounts of electrical energy. We report on the fundamental principles that guide operations of these cells using multiple intrusive electrochemical and physical analytical methods, including chronopotentiometry, cyclic voltammetry, direct analysis in real-time mass spectrometry, energy-dispersive x-ray spectroscopy, x-ray photoelectron spectroscopy, and coupled thermogravimetric analysis–Fourier transform infrared spectroscopy. On this basis, we demonstrate that an electrochemical cell that uses metallic aluminum as anode and a carbon dioxide/oxygen gas mixture as the active material in the cathode provides a path toward electrochemical generation of a valuable (C2) species and electrical energy. Specifically, we show that the cell first reduces O2 at the cathode to form superoxide intermediates. Chemical reaction of the superoxide with CO2 sequesters the CO2 in the form of aluminum oxalate, Al2(C2O4)3, as the dominant product. On the basis of an analysis of the overall CO2 footprint, which considers emissions associated with the production of the aluminum anode and the CO2 captured/abated by the Al/CO2-O2 electrochemical cell, we conclude that the proposed process offers an important strategy for net reduction of CO2 emissions. PMID:27453949</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24979194','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24979194"><span>Celiac disease treatment: gluten-free diet and beyond.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mäki, Markku</p> <p>2014-07-01</p> <p>The basis for celiac disease (CD) treatment is a strict lifelong gluten-free diet. On the diet, the small intestinal mucosal injury heals and gluten-induced symptoms and signs disappear. The mucosal healing is a prerequisite for sustaining health and is also obtained with a diet containing oats and trace amounts of gluten, industrially purified wheat starch-based gluten-free products. The small intestinal mucosa does not heal in noncompliant people, nor when a patient is inadvertently ingesting gluten. Development of adjunctive or alternative therapies is on its way. There are several novel treatment pipelines within academy and industry. Examples are the ideas of using glutenases as a drug to degrade the ingested gluten, polymers to bind and sequester the gluten to the feces, and also vaccine development for an immunotherapy to induce tolerance towards gluten. Clinical drug trials are to be foreseen in CD, soon also in children.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4575267','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4575267"><span>Human Calprotectin Is an Iron-Sequestering Host-Defense Protein</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Nakashige, Toshiki G.; Zhang, Bo; Krebs, Carsten; Nolan, Elizabeth M.</p> <p>2015-01-01</p> <p>Human calprotectin (CP) is a metal-chelating antimicrobial protein of the innate immune response. The current working model states that CP sequesters manganese and zinc from pathogens. We report the discovery that CP chelates iron and deprives bacteria of this essential nutrient. Elemental analysis of CP-treated growth medium establishes that CP reduces the concentrations of manganese, iron, and zinc. Microbial growth studies reveal that iron depletion by CP contributes to the growth inhibition of bacterial pathogens. Biochemical investigations demonstrate that CP coordinates Fe(II) at an unusual hexahistidine motif, and the Mössbauer spectrum of 57Fe(II)-bound CP is consistent with coordination of high-spin Fe(II) at this site (δ = 1.20 mm/s, ΔEQ = 1.78 mm/s). In the presence of Ca(II), CP turns on its iron-sequestering function and exhibits sub-picomolar affinity for Fe(II). Our findings expand the biological coordination chemistry of iron and support a previously unappreciated role for CP in mammalian iron homeostasis. PMID:26302479</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/19746933','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/19746933"><span>Proton-driven amide bond-cleavage pathways of gas-phase peptide ions lacking mobile protons.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bythell, Benjamin J; Suhai, Sándor; Somogyi, Arpád; Paizs, Béla</p> <p>2009-10-07</p> <p>The mobile proton model (Dongre, A. R., Jones, J. L., Somogyi, A. and Wysocki, V. H. J. Am. Chem. Soc. 1996, 118 , 8365-8374) of peptide fragmentation states that the ionizing protons play a critical role in the gas-phase fragmentation of protonated peptides upon collision-induced dissociation (CID). The model distinguishes two classes of peptide ions, those with or without easily mobilizable protons. For the former class mild excitation leads to proton transfer reactions which populate amide nitrogen protonation sites. This enables facile amide bond cleavage and thus the formation of b and y sequence ions. In contrast, the latter class of peptide ions contains strongly basic functionalities which sequester the ionizing protons, thereby often hindering formation of sequence ions. Here we describe the proton-driven amide bond cleavages necessary to produce b and y ions from peptide ions lacking easily mobilizable protons. We show that this important class of peptide ions fragments by different means from those with easily mobilizable protons. We present three new amide bond cleavage mechanisms which involve salt-bridge, anhydride, and imine enol intermediates, respectively. All three new mechanisms are less energetically demanding than the classical oxazolone b(n)-y(m) pathway. These mechanisms offer an explanation for the formation of b and y ions from peptide ions with sequestered ionizing protons which are routinely fragmented in large-scale proteomics experiments.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22527055','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22527055"><span>Occurrence of sarmentosin and other hydroxynitrile glucosides in Parnassius (papilionidae) butterflies and their food plants.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bjarnholt, Nanna; Nakonieczny, Mirosław; Kędziorski, Andrzej; Debinski, Diane M; Matter, Stephen F; Olsen, Carl Erik; Zagrobelny, Mika</p> <p>2012-05-01</p> <p>Sequestration of plant secondary metabolites is a widespread phenomenon among aposematic insects. Sarmentosin is an unsaturated γ-hydroxynitrile glucoside known from plants and some Lepidoptera. It is structurally and biosynthetically closely related to cyanogenic glucosides, which are commonly sequestered from food plants and/or de novo synthesized by lepidopteran species. Sarmentosin was found previously in Parnassius (Papilionidae) butterflies, but it was not known how the occurrence was related to food plants or whether Parnassius species could biosynthesize the compound. Here, we report on the occurrence of sarmentosin and related compounds in four different Parnassius species belonging to two different clades, as well as their known and suspected food plants. There were dramatic differences between the two clades, with P. apollo and P. smintheus from the Apollo group containing high amounts of sarmentosin, and P. clodius and P. mnemosyne from the Mnemosyne group containing low or no detectable amounts. This was reflected in the larval food plants; P. apollo and P. smintheus larvae feed on Sedum species (Crassulaceae), which all contained considerable amounts of sarmentosin, while the known food plants of the two other species, Dicentra and Corydalis (Fumariaceae), had no detectable levels of sarmentosin. All insects and plants containing sarmentosin also contained other biosynthetically related hydroxynitrile glucosides in patterns previously reported for plants, but not for insects. Not all findings could be explained by sequestration alone and we therefore hypothesize that Parnassius species are able to de novo synthesize sarmentosin.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://hdl.handle.net/2060/20120007638','NASA-TRS'); return false;" href="http://hdl.handle.net/2060/20120007638"><span>Nano Sponges for Drug Delivery and Medicinal Applications</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://ntrs.nasa.gov/search.jsp">NASA Technical Reports Server (NTRS)</a></p> <p>Tour, James M.; Lucente-Schultz, Rebecca; Leonard, Ashley; Kosynkin, Dimitry V.; Price, Brandi Katherine; Hudson, Jared L.; Conyers, Jodie L., Jr.; Moore, Valerie C.; Casscells, S. Ward; Myers, Jeffrey N.; <a style="text-decoration: none; " href="javascript:void(0); " onClick="displayelement('author_20120007638'); toggleEditAbsImage('author_20120007638_show'); toggleEditAbsImage('author_20120007638_hide'); "> <img style="display:inline; width:12px; height:12px; " src="images/arrow-up.gif" width="12" height="12" border="0" alt="hide" id="author_20120007638_show"> <img style="width:12px; height:12px; display:none; " src="images/arrow-down.gif" width="12" height="12" border="0" alt="hide" id="author_20120007638_hide"></p> <p>2012-01-01</p> <p>This invention is a means of delivering a drug, or payload, to cells using non-covalent associations of the payload with nano-engineered scaffolds; specifically, functionalized single-walled carbon nanotubes (SWNTs) and their derivatives where the payload is effectively sequestered by the nanotube's addends and then delivered to the site (often interior of a cell) of interest. Polyethylene glycol (PEG) and other water-soluble organic molecules have been shown to greatly enhance the solubility of SWNTs in water. PEG groups and other water-solubilizing addends can act to sequester (sponge) molecules and deliver them into cells. Using PEG that, when attached to the SWNTs, the SWNT/PEG matrix will enter cells has been demonstrated. This was visualized by the addition of fluorescein isothiocyanate (FITC) to the SWNT/PEG matrix. Control studies showed that both FITC alone and FITC/PEG did not enter the cells. These observations suggest that the FITC is highly associated with the SWNT/PEG matrix that brings the FITC into the cells, allowing visualization of SWNTs in cells. The FITC is not covalently attached, because extended dialysis in hot DMF will remove all fluorescence quickly (one week). However, prolonged dialysis in water (1-2 months) will only slowly diminish the fluorescence. This demonstrates that the SWNT/PEG matrix solubilizes the FITC by sequestering it from the surrounding water and into the more solubilizing organic environment of the SWNT/PEG matrix of this type. This can be extended for the sequestering of other molecules such as drugs with PEG and other surfactants.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3317781','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3317781"><span>Host Shifts from Lamiales to Brassicaceae in the Sawfly Genus Athalia</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Opitz, Sebastian E. W.; Boevé, Jean-Luc; Nagy, Zoltán Tamás; Sonet, Gontran; Koch, Frank; Müller, Caroline</p> <p>2012-01-01</p> <p>Plant chemistry can be a key driver of host shifts in herbivores. Several species in the sawfly genus Athalia are important economic pests on Brassicaceae, whereas other Athalia species are specialized on Lamiales. These host plants have glucosides in common, which are sequestered by larvae. To disentangle the possible direction of host shifts in this genus, we examined the sequestration specificity and feeding deterrence of iridoid glucosides (IGs) and glucosinolates (GSs) in larvae of five species which either naturally sequester IGs from their hosts within the Plantaginaceae (Lamiales) or GSs from Brassicaceae, respectively. Furthermore, adults were tested for feeding stimulation by a neo-clerodane diterpenoid which occurs in Lamiales. Larvae of the Plantaginaceae-feeders did not sequester artificially administered p-hydroxybenzylGS and were more deterred by GSs than Brassicaceae-feeders were by IGs. In contrast, larvae of Brassicaceae-feeders were able to sequester artificially administered catalpol (IG), which points to an ancestral association with Lamiales. In line with this finding, adults of all tested species were stimulated by the neo-clerodane diterpenoid. Finally, in a phylogenetic tree inferred from genetic marker sequences of 21 Athalia species, the sister species of all remaining 20 Athalia species also turned out to be a Lamiales-feeder. Fundamental physiological pre-adaptations, such as the establishment of a glucoside transporter, and mechanisms to circumvent activation of glucosides by glucosidases are therefore necessary prerequisites for successful host shifts between Lamiales and Brassicaceae. PMID:22485146</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28393296','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28393296"><span>Localization of Defensive Chemicals in Two Congeneric Butterflies (Euphydryas, Nymphalidae).</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mason, Peri A; Deane Bowers, M</p> <p>2017-05-01</p> <p>Many insect species sequester compounds acquired from their host plants for defense against natural enemies. The distribution of these compounds is likely to affect both their efficacy as defenses, and their costs. In this study we examined the distribution of sequestered iridoid glycosides (IGs) in two congeneric species of nymphalid butterfly, Euphydryas anicia and E. phaeton, and found that the pattern of localization of IGs differed between the two species. Although IG concentrations were quite high in the heads of both species, the relative concentrations in wings and abdomens differed substantially. Euphydryas anicia had relatively high IG concentrations in their abdomens and low IG concentrations in their wings, whereas the reverse was true in E. phaeton. We interpret these results in light of two current hypotheses regarding where sequestered chemicals should be localized: that they should be found in wings, which would allow non-lethal sampling by predators; and that their distribution is constrained by the distribution of tissue types to which sequestered compounds bind. We also offer the third hypothesis, that costs of storage may differ among body parts, and that the localization of compounds may reflect a cost-reduction strategy. Results from E. phaeton were consistent with all three of these non-mutually exclusive hypotheses, whereas results from E. anicia were only consistent with the notion that tissue bias among body parts plays a role in IG distribution. The finding that these two congeneric butterflies exhibit different patterns of IG localization suggests that they have been shaped by different selection regimes.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2018Litho.310...20W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2018Litho.310...20W"><span>Tin in granitic melts: The role of melting temperature and protolith composition</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Wolf, Mathias; Romer, Rolf L.; Franz, Leander; López-Moro, Francisco Javier</p> <p>2018-06-01</p> <p>Granite bound tin mineralization typically is seen as the result of extreme magmatic fractionation and late exsolution of magmatic fluids. Mineralization, however, also could be obtained at considerably less fractionation if initial melts already had enhanced Sn contents. We present chemical data and results from phase diagram modeling that illustrate the dominant roles of protolith composition, melting conditions, and melt extraction/evolution for the distribution of Sn between melt and restite and, thus, the Sn content of melts. We compare the element partitioning between leucosome and restite of low-temperature and high-temperature migmatites. During low-temperature melting, trace elements partition preferentially into the restite with the possible exception of Sr, Cd, Bi, and Pb, that may be enriched in the melt. In high-temperature melts, Ga, Y, Cd, Sn, REE, Pb, Bi, and U partition preferentially into the melt whereas Sc, V, Cr, Co, Ni, Mo, and Ba stay in the restite. This contrasting behavior is attributed to the stability of trace element sequestering minerals during melt generation. In particular muscovite, biotite, titanite, and rutile act as host phases for Sn and, therefore prevent Sn enrichment in the melt as long as they are stable phases in the restite. As protolith composition controls both the mineral assemblage and modal contents of the various minerals, protolith composition eventually also controls the fertility of a rock during anatexis, restite mineralogy, and partitioning behavior of trace metals. If a particular trace element is sequestered in a phase that is stable during partial melting, the resulting melt is depleted in this element whereas the restite becomes enriched. Melt generation at high temperature may release Sn when Sn-hosts become unstable. If melt has not been lost before the breakdown of Sn-hosts, Sn contents in the melt will increase but never will be high. In contrast, if melt has been lost before the decomposition of Sn-hosts, the small volume of the high-temperature melt will not be diluted by low-temperature, low-Sn melts and, therefore, could have high Sn-contents. The combination of multiple melt extractions and Sn-mobilization at high temperature results in strong Sn enrichment in late, high-temperature melts. Metal enrichment during partial melting becomes particularly efficient, if the sedimentary protolith had experienced intense chemical alteration as the loss of Na and Ca together with a relative enrichment of K favors muscovite-rich metamorphic mineral assemblages that produce large amounts of melt during muscovite dehydration melting.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013NatCo...4E2753L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013NatCo...4E2753L"><span>Soluble forms of polyQ-expanded huntingtin rather than large aggregates cause endoplasmic reticulum stress</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Leitman, Julia; Ulrich Hartl, F.; Lederkremer, Gerardo Z.</p> <p>2013-11-01</p> <p>In Huntington’s disease, as in other neurodegenerative diseases, it was initially thought that insoluble protein aggregates are the toxic species. However, growing evidence implicates soluble oligomeric polyglutamine-expanded huntingtin in cytotoxicity. Here we show that pathogenic huntingtin inhibits endoplasmic reticulum (ER)-associated degradation and induces ER stress before its aggregation into visible inclusions. All three branches of the unfolded protein response are activated. ER stress can be compensated by overexpression of p97/VCP, suggesting its sequestration by pathogenic huntingtin as a main cause. Stress correlates with the presence of huntingtin oligomers and is independent of continual huntingtin synthesis. Stress levels, measured in striatal neurons, are stabilized but only slowly subside on huntingtin aggregation into inclusions. Our results can be explained by the constant conversion of huntingtin monomers to toxic oligomers; large aggregates sequester the former, precluding further conversion, whereas pre-existing toxic oligomers are only gradually depleted.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/367551-protection-against-heavy-metal-toxicity-mucous-scales-fish','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/367551-protection-against-heavy-metal-toxicity-mucous-scales-fish"><span>Protection against heavy metal toxicity by mucous and scales in fish</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Coello, W.F.; Khan, M.A.Q.</p> <p>1995-12-31</p> <p>Fingerlings of three freshwater fish species showed differences in susceptibility to lethality of 250 mg/L lead suspension or lead nitrate solution in water. Among these the large mouth bass Micropterus salmoides seemed to be more tolerant than green sunfish Lepomis cyanellus and goldfish Carassius auratus. Mucous from large mouth bass, when added to jars containing lead, lowered the toxicity of lead to sunfish and goldfish. Adding scales, especially if these were pretreated with an alkaline solution of cysteine and glycine, made all these species become tolerant to otherwise lethal concentrations of lead nitrate. The scales and mucous together buffered themore » acidity of lead nitrate and mercuric nitrate solution and sequestered hydrogen ions and lead and mercury from water and then settled to the bottom of jars. Scales of younger fingerling were more efficient than those of older ones.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1144205','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1144205"><span>Identification and subsequent phosphorylation of sequestered partially processed caseins in the lactating guinea-pig mammary gland.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Boulton, A P; Pascall, J C; Craig, R K</p> <p>1984-01-01</p> <p>Golgi and endoplasmic-reticulum fractions were prepared from the lactating guinea-pig mammary gland. The endoplasmic-reticulum fraction was highly active in the processing and sequestration of milk-protein primary translation products. Explants from the lactating gland in organ culture were used to identify milk-protein intermediates present in the secretory pathway, and the timing of the events leading to their post-translational modification. With [35S]methionine, the milk proteins labelled after a short pulse (3 min) were represented by the partially processed (but not phosphorylated) caseins and alpha-lactalbumin sequestered within membrane-bound vesicles. After a 30 min labelling period, higher-Mr caseins with electrophoretic mobilities identical with those of the phosphorylated caseins isolated from milk were identified in the incubation medium, and sequestered within membrane-bound vesicles. Pulse-chase experiments established a precursor-product relationship between these forms. Secretion is apparent approx. 30 min after sequestration. Caseins are highly phosphorylated; removal of the phosphate residues with acid phosphatase results in proteins with increased electrophoretic mobility, similar to those of the partially processed early casein intermediates found sequestered in explants after a 3 min pulse with [35S]methionine, and those sequestered within microsomal membranes after mRNA-directed cell-free protein synthesis. A comparison of the proteins labelled during both short (5 min) and long (30 min) pulses with [35S]methionine and [32P]Pi shows that, in contrast with the 35S-labelled caseins, those labelled with [32P]Pi exhibit only electrophoretic mobilities identical with those of the mature caseins isolated from milk and those identified after long labelling periods with [35S]methionine. No phosphorylated early intermediate forms of caseins were identified. We conclude that the synthesis and post-translational modification of guinea-pig caseins occurs in two stages, (i) an early event involving synthesis and sequestration within the endoplasmic reticulum, an event that involves signal-peptide removal, followed (ii) 10-20 min later by phosphorylation at a different point in the secretory pathway, probably in the Golgi complex. Secretion of the phosphorylated caseins occurs 10-20 min later. Images Fig. 1. Fig. 2. Fig. 3. Fig. 4. Fig. 5. PMID:6477529</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24625698','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24625698"><span>The multiple strategies of an insect herbivore to overcome plant cyanogenic glucoside defence.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Pentzold, Stefan; Zagrobelny, Mika; Roelsgaard, Pernille Sølvhøj; Møller, Birger Lindberg; Bak, Søren</p> <p>2014-01-01</p> <p>Cyanogenic glucosides (CNglcs) are widespread plant defence compounds that release toxic hydrogen cyanide by plant β-glucosidase activity after tissue damage. Specialised insect herbivores have evolved counter strategies and some sequester CNglcs, but the underlying mechanisms to keep CNglcs intact during feeding and digestion are unknown. We show that CNglc-sequestering Zygaena filipendulae larvae combine behavioural, morphological, physiological and biochemical strategies at different time points during feeding and digestion to avoid toxic hydrolysis of the CNglcs present in their Lotus food plant, i.e. cyanogenesis. We found that a high feeding rate limits the time for plant β-glucosidases to hydrolyse CNglcs. Larvae performed leaf-snipping, a minimal disruptive feeding mode that prevents mixing of plant β-glucosidases and CNglcs. Saliva extracts did not inhibit plant cyanogenesis. However, a highly alkaline midgut lumen inhibited the activity of ingested plant β-glucosidases significantly. Moreover, insect β-glucosidases from the saliva and gut tissue did not hydrolyse the CNglcs present in Lotus. The strategies disclosed may also be used by other insect species to overcome CNglc-based plant defence and to sequester these compounds intact.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5823522','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5823522"><span>HIV internalization into oral and genital epithelial cells by endocytosis and macropinocytosis leads to viral sequestration in the vesicles</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Yasen, Aizezi; Herrera, Rossana; Rosbe, Kristina; Lien, Kathy; Tugizov, Sharof M.</p> <p>2018-01-01</p> <p>Recently, we showed that HIV-1 is sequestered, i.e., trapped, in the intracellular vesicles of oral and genital epithelial cells. Here, we investigated the mechanisms of HIV-1 sequestration in vesicles of polarized tonsil, foreskin and cervical epithelial cells. HIV-1 internalization into epithelial cells is initiated by multiple entry pathways, including clathrin-, caveolin/lipid raft-associated endocytosis and macropinocytosis. Inhibition of HIV-1 attachment to galactosylceramide and heparan sulfate proteoglycans, and virus endocytosis and macropinocytosis reduced HIV-1 sequestration by 30–40%. T-cell immunoglobulin and mucin domain 1 (TIM-1) were expressed on the apical surface of polarized tonsil, cervical and foreskin epithelial cells. However, TIM-1-associated HIV-1 macropinocytosis and sequestration were detected mostly in tonsil epithelial cells. Sequestered HIV-1 was resistant to trypsin, pronase, and soluble CD4, indicating that the sequestered virus was intracellular. Inhibition of HIV-1 intraepithelial sequestration and elimination of vesicles containing virus in the mucosal epithelium may help in the prevention of HIV-1 mucosal transmission. PMID:29277006</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70034095','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70034095"><span>Federal land management, carbon sequestration, and climate change in the Southeastern U.S.: a case study with fort benning</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Zhao, S.; Liu, S.; Li, Z.; Sohl, Terry L.</p> <p>2010-01-01</p> <p>Land use activities can have a major impact on the temporal trendsandspatialpatternsofregionalland-atmosphereexchange of carbon. Federal lands generally have substantially different land management strategies from surrounding areas, and the carbon consequences have rarely been quantified and assessed. Using the Fort Benning Installation as a case study, we used the General Ensemble biogeochemical Modeling System (GEMS) to simulate and compare ecosystem carbon sequestration between the U.S. Army's Fort Benning and surrounding areas from 1992 to 2050. Our results indicate that the military installation sequestered more carbon than surrounding areas from 1992 to 2007 (76.7 vs 18.5 g C m-2 yr-1), and is projected to continue sequestering more carbon from 2008 to 2050 (75.7 vs 25.6 g C m-2 yr-1), mostly because of the proactive management approaches adopted on military training lands. Our results suggest that federal lands might play a positive and important role in sequestering and conserving atmospheric carbon because some anthropogenic disturbances (e.g., urbanization, forest harvesting, and agriculture) can be minimized or prevented on federal lands</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li class="active"><span>12</span></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_12 --> <div id="page_13" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li class="active"><span>13</span></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="241"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3748188','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3748188"><span>Amorphous areas in the cytoplasm of Dendrobium tepal cells</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>van Doorn, Wouter G.; Kirasak, Kanjana; Ketsa, Saichol</p> <p>2013-01-01</p> <p>In Dendrobium flowers some tepal mesophyll cells showed cytoplasmic areas devoid of large organelles. Such amorphous areas comprised up to about 40% of the cross-section of a cell. The areas were not bound by a membrane. The origin of these areas is not known. We show data suggesting that they can be formed from vesicle-like organelles. The data imply that these organelles and other material become degraded inside the cytoplasm. This can be regarded as a form of autophagy. The amorphous areas became surrounded by small vacuoles, vesicles or double membranes. These seemed to merge and thereby sequester the areas. Degradation of the amorphous areas therefore seemed to involve macroautophagy. PMID:23823702</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/1082431','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/1082431"><span>A PERMEABLE ACTIVE AMENDMENT CONCRETE (PAAC) FOR CONTAMINANT REMEDIATION AND EROSION CONTROL</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Knox, A.; Paller, M.; Dixon, K.</p> <p>2012-06-29</p> <p>The final project report for SEED SERDP ER - 2134 describes the development of permeable active amendment concrete (PAAC), which was evaluated through four tasks: 1) development of PAAC; 2) assessment of PAAC for contaminant removal; 3) evaluation of promising PAAC formulations for potential environmental impacts; and 4) assessment of the hydraulic, physical, and structural properties of PAAC. Conventional permeable concrete (often referred to as pervious concrete) is concrete with high porosity as a result of an extensive and interconnected void content. It is made from carefully controlled amounts of water and cementitious materials used to create a paste thatmore » forms a coating around aggregate particles. The mixture has a substantial void content (e.g., 15% - 25%) that results in a highly permeable structure that drains quickly. In PAAC, the aggregate material is partly replaced by chemically-active amendments that precipitate or adsorb contaminants in water that flows through the concrete interstices. PAAC combines the relatively high structural strength, ample void space, and water permeability of pervious concrete with the contaminant sequestration ability of chemically-active amendments to produce a new material with superior durability and ability to control contaminant mobility. The high surface area provided by the concrete interstices in PAAC provides significant opportunity for contaminants to react with the amendments incorporated into the concrete matrix. PAAC has the potential to immobilize a large variety of organic and inorganic contaminants by incorporating different active sequestering agents including phosphate materials (rock phosphate), organoclays, zeolite, and lime individually or in combinations.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFMMR41A2627B','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFMMR41A2627B"><span>Capillary Imbibition of Hydraulic Fracturing Fluids into Partially Saturated Shale</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Birdsell, D.; Rajaram, H.; Lackey, G.</p> <p>2015-12-01</p> <p>Understanding the migration of hydraulic fracturing fluids injected into unconventional reservoirs is important to assess the risk of aquifer contamination and to optimize oil and gas production. Capillary imbibition causes fracturing fluids to flow from fractures into the rock matrix where the fluids are sequestered for geologically long periods of time. Imbibition could explain the low amount of flowback water observed in the field (5-50% of the injected volume) and reduce the chance of fracturing fluid migrating out of formation towards overlying aquifers. We present calculations of spontaneous capillary imbibition in the form of an "imbibition rate parameter" (A) based on the only known exact analytical solution for spontaneous capillary imbibition. A depends on the hydraulic and capillary properties of the reservoir rock, the initial water saturation, and the viscosities of the wetting and nonwetting fluids. Imbibed volumes can be large for a high permeability shale gas reservoir (up to 95% of the injected volume) or quite small for a low permeability shale oil reservoir (as low as 3% of the injected volume). We also present a nondimensionalization of the imbibition rate parameter, which facilitates the calculation of A and clarifies the relation of A to initial saturation, porous medium properties, and fluid properties. Over the range of initial water saturations reported for the Marcellus shale (0.05-0.6), A varies by less than factors of ~1.8 and ~3.4 for gas and oil nonwetting phases respectively. However, A decreases significantly for larger initial water saturations. A is most sensitive to the intrinsic permeability of the reservoir rock and the viscosity of the fluids.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUFMNS21B1896M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUFMNS21B1896M"><span>Carbon Dynamics in Isolated Wetlands of the Northern Everglades Watershed is Revealed using Hydrogeophysical Methods and Aerial Imagery</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>McClellan, M. D.; Job, M. J.; Comas, X.</p> <p>2016-12-01</p> <p>Peatlands play a critical role in the carbon (C) cycle by sequestering and storing a large fraction of the global soil C pool; and by producing and releasing significant amounts of greenhouse gasses (CO2, CH4) into the atmosphere. While most studies exploring these attributes have traditionally focused on boreal and subarctic biomes, wetlands in temperate and tropical climates (such as the Florida Everglades) have been understudied despite accounting for more than 20% of the global peatland C stock. We used a combination of indirect non-invasive geophysical methods (ground penetrating radar, GPR), aerial imagery, and direct measurements (gas traps) to estimate the contribution of subtropical isolated wetlands to the total C pool of the pine flatwoods landscape at the Disney Wilderness Preserve (DWP, Poinciana, FL). Measurements were collected within two types of isolated wetlands at the preserve, emergent and forested. Geophysical surveys were collected weekly to 1) define total peat thickness (i.e. from the surface to the mineral soil interface) and 2) estimate changes within the internal gas regime. Direct measurements of gas fluxes using gas traps and time-lapse cameras were used to estimate gas emissions (i.e. CH­4 and CO2). Aerial photographs were used to estimate surface area for each isolated wetland and develop a relationship between surface area and total wetland C production that is then applied to every isolated wetland in the preserve to estimate the total wetland C contribution. This work seeks to provide evidence that isolated wetlands within the central Florida landscape are key contributors of C to the atmosphere.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017EGUGA..1918967H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017EGUGA..1918967H"><span>Make the rhizosphere great again: microbes build walls in soil that roots pay for</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Hallett, Paul; Naveed, Muhammad; Raffan, Annette; Bengough, Glyn; Feeney, Debbie; Brown, Lawrie; Georgy, Timothy; Cooper, Laura; Daly, Keith; Koebernick, Nicolai; Sinclair, Ian; Roose, Tiina</p> <p>2017-04-01</p> <p>Plant roots physically manipulate surrounding soil to ease penetration, provide anchorage, improve water and nutrient capture and enhance gaseous exchange, with knock-on impacts to habitats for microorganisms, soil stabilisation and sequestering of carbon. Root traits that alter soil physical properties include exudates, root hairs, the extent of soil drying and root architecture. We are exploring the extent that different root traits physically manipulate soils, drawing on near isogenic crop lines that differ in root hairs, architecture and exudation, and new physical approaches that quantify rhizosphere impacts. These approaches include hydromechanical testing that bridge soil physics, soil biology and materials science, small-scale measurements and non-invasive imaging to measure the rhizosphere directly. We use these data in image based models that describe retention and transport of water and nutrients in the rhizosphere. Micromechanics tests have found that barley root exudates initially disperse soil, followed by gelling after secondary decomposition of these exudates by microbes. Maize root exudates, on the other hand, caused a large amount of gelling of the soil, whereas this impact decreased with microbial decomposition. From our data on exudate viscosity, contact angle and surface tension, we have modelled the direct impact on water retention and transport in the rhizosphere, using 3D CT imaging with Synchrotron XRay CT with sufficient resolution to detect root hairs. From these images, pore structure changes were found to be affected by the presence of root hairs in barley. This could have implications to resource capture by plants, showing a secondary impact of root hairs beyond expanding the volume of soil that roots access.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70033616','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70033616"><span>Mid-infrared diffuse reflectance spectroscopic examination of charred pine wood, bark, cellulose, and lignin: Implications for the quantitative determination of charcoal in soils</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Reeves, J. B.; McCarty, G.W.; Rutherford, D.W.; Wershaw, R. L.</p> <p>2008-01-01</p> <p>Fires in terrestrial ecosystems produce large amounts of charcoal that persist in the environment and represent a substantial pool of sequestered carbon in soil. The objective of this research was to investigate the effect of charring on mid-infrared spectra of materials likely to be present in forest fires in order to determine the feasibility of determining charred organic matter in soils. Four materials (cellulose, lignin, pine bark, and pine wood) and char from these materials, created by charring for various durations (1 to 168 h) and at various temperatures (200 to 450 ??C), were studied. Mid-infrared spectra and measures of acidity (total acids, carboxylic acids, lactones, and phenols as determined by titration) were determined for 56 different samples (not all samples were charred at all temperatures/durations). Results showed spectral changes that varied with the material, temperature, and duration of charring. Despite the wide range of spectral changes seen with the differing materials and length/temperature of charring, partial least squares calibrations for total acids, carboxylic acids, lactones, and phenols were successfully created (coefficient of determination and root mean squared deviation of 0.970 and 0.380; 0.933 and 0.227; 0.976 and 0.120; and 0.982 and 0.101 meq/g, respectively), indicating that there is a sufficient commonality in the changes to develop calibrations without the need for unique calibrations for each specific material or condition of char formation. ?? 2008 Society for Applied Spectroscopy.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1280783','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1280783"><span>Cation radius effects on the helix-coil transition of DNA. Cryptates and other large cations.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Trend, B L; Knoll, D A; Ueno, M; Evans, D F; Bloomfield, V A</p> <p>1990-01-01</p> <p>Most polyelectrolyte theories of the effect of ions on the thermal melting of DNA assume that the predominant influence of the cations comes through their charge. Ion size and structure are treated, for analytic convenience, as negligible variables. We have examined the validity of this assumption by measuring the melting temperature of calf thymus DNA as a function of salt concentration with four univalent cations of different hydrated radii. These are K+ (3.3 A), (n-Pr)4N+ (4.5 A), (EtOH)4N+ (4.5 A), and C222-K+ (5 A). C222-K+ is a complex of cryptand C222 with K+. With K+ as the sole cation, Tm varies linearly with the log of ionic strength over the range 0.001-0.1 M. With all the K+ sequestered by an equimolar amount of C222, Tm is depressed by 10-20 degrees C and the slope of Tm vs. ionic strength is lower. At low ionic strength, an even greater reduction in Tm is achieved with (n-Pr)4N+; but the similar-sized (EtOH)4N+ gives a curve more similar to K+. Theoretical modeling, taking into account cation size through the Poisson-Boltzmann equation for cylindrical polyelectrolytes, predicts that larger cations should be less effective in stabilizing the double helix; but the calculated effect is less than observed experimentally. These results show that valence, cation size, and specific solvation effects are all important in determining the stability of the double-helical form of DNA. PMID:2344467</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017BGeo...14.4023C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017BGeo...14.4023C"><span>Modelling past, present and future peatland carbon accumulation across the pan-Arctic region</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Chaudhary, Nitin; Miller, Paul A.; Smith, Benjamin</p> <p>2017-09-01</p> <p>Most northern peatlands developed during the Holocene, sequestering large amounts of carbon in terrestrial ecosystems. However, recent syntheses have highlighted the gaps in our understanding of peatland carbon accumulation. Assessments of the long-term carbon accumulation rate and possible warming-driven changes in these accumulation rates can therefore benefit from process-based modelling studies. We employed an individual-based dynamic global ecosystem model with dynamic peatland and permafrost functionalities and patch-based vegetation dynamics to quantify long-term carbon accumulation rates and to assess the effects of historical and projected climate change on peatland carbon balances across the pan-Arctic region. Our results are broadly consistent with published regional and global carbon accumulation estimates. A majority of modelled peatland sites in Scandinavia, Europe, Russia and central and eastern Canada change from carbon sinks through the Holocene to potential carbon sources in the coming century. In contrast, the carbon sink capacity of modelled sites in Siberia, far eastern Russia, Alaska and western and northern Canada was predicted to increase in the coming century. The greatest changes were evident in eastern Siberia, north-western Canada and in Alaska, where peat production hampered by permafrost and low productivity due the cold climate in these regions in the past was simulated to increase greatly due to warming, a wetter climate and higher CO2 levels by the year 2100. In contrast, our model predicts that sites that are expected to experience reduced precipitation rates and are currently permafrost free will lose more carbon in the future.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3126779','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3126779"><span>Computer-based fluorescence quantification: a novel approach to study nucleolar biology</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p></p> <p>2011-01-01</p> <p>Background Nucleoli are composed of possibly several thousand different proteins and represent the most conspicuous compartments in the nucleus; they play a crucial role in the proper execution of many cellular processes. As such, nucleoli carry out ribosome biogenesis and sequester or associate with key molecules that regulate cell cycle progression, tumorigenesis, apoptosis and the stress response. Nucleoli are dynamic compartments that are characterized by a constant flux of macromolecules. Given the complex and dynamic composition of the nucleolar proteome, it is challenging to link modifications in nucleolar composition to downstream effects. Results In this contribution, we present quantitative immunofluorescence methods that rely on computer-based image analysis. We demonstrate the effectiveness of these techniques by monitoring the dynamic association of proteins and RNA with nucleoli under different physiological conditions. Thus, the protocols described by us were employed to study stress-dependent changes in the nucleolar concentration of endogenous and GFP-tagged proteins. Furthermore, our methods were applied to measure de novo RNA synthesis that is associated with nucleoli. We show that the techniques described here can be easily combined with automated high throughput screening (HTS) platforms, making it possible to obtain large data sets and analyze many of the biological processes that are located in nucleoli. Conclusions Our protocols set the stage to analyze in a quantitative fashion the kinetics of shuttling nucleolar proteins, both at the single cell level as well as for a large number of cells. Moreover, the procedures described here are compatible with high throughput image acquisition and analysis using HTS automated platforms, thereby providing the basis to quantify nucleolar components and activities for numerous samples and experimental conditions. Together with the growing amount of information obtained for the nucleolar proteome, improvements in quantitative microscopy as they are described here can be expected to produce new insights into the complex biological functions that are orchestrated by the nucleolus. PMID:21639891</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26854892','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26854892"><span>Legacy effects of grassland management on soil carbon to depth.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ward, Susan E; Smart, Simon M; Quirk, Helen; Tallowin, Jerry R B; Mortimer, Simon R; Shiel, Robert S; Wilby, Andrew; Bardgett, Richard D</p> <p>2016-08-01</p> <p>The importance of managing land to optimize carbon sequestration for climate change mitigation is widely recognized, with grasslands being identified as having the potential to sequester additional carbon. However, most soil carbon inventories only consider surface soils, and most large-scale surveys group ecosystems into broad habitats without considering management intensity. Consequently, little is known about the quantity of deep soil carbon and its sensitivity to management. From a nationwide survey of grassland soils to 1 m depth, we show that carbon in grassland soils is vulnerable to management and that these management effects can be detected to considerable depth down the soil profile, albeit at decreasing significance with depth. Carbon concentrations in soil decreased as management intensity increased, but greatest soil carbon stocks (accounting for bulk density differences), were at intermediate levels of management. Our study also highlights the considerable amounts of carbon in subsurface soil below 30 cm, which is missed by standard carbon inventories. We estimate grassland soil carbon in Great Britain to be 2097 Tg C to a depth of 1 m, with ~60% of this carbon being below 30 cm. Total stocks of soil carbon (t ha(-1) ) to 1 m depth were 10.7% greater at intermediate relative to intensive management, which equates to 10.1 t ha(-1) in surface soils (0-30 cm), and 13.7 t ha(-1) in soils from 30 to 100 cm depth. Our findings highlight the existence of substantial carbon stocks at depth in grassland soils that are sensitive to management. This is of high relevance globally, given the extent of land cover and large stocks of carbon held in temperate managed grasslands. Our findings have implications for the future management of grasslands for carbon storage and climate mitigation, and for global carbon models which do not currently account for changes in soil carbon to depth with management. © 2016 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFM.B12D..06L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFM.B12D..06L"><span>Toward Reducing Uncertainties in Biospheric Carbon Uptake in the American West: An Atmospheric Perspective</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Lin, J. C.; Stephens, B. B.; Mallia, D.; Wu, D.; Jacobson, A. R.</p> <p>2015-12-01</p> <p>Despite the need for an understanding of terrestrial biospheric carbon fluxes to account for carbon cycle feedbacks and predict future CO2 concentrations, knowledge of such fluxes at the regional scale remains poor. This is particularly true in mountainous areas, where lack of observations combined with difficulties in their interpretation lead to significant uncertainties. Yet mountainous regions are also where significant forest cover and biomass are found—areas that have the potential to serve as carbon sinks. In particular, understanding carbon fluxes in the American West is of critical importance for the U.S. carbon budget, as the large area and biomass indicate potential for carbon sequestration. However, disturbances such as drought, insect outbreak, and wildfires in this region can introduce significant perturbations to the carbon cycle and thereby affect the amount of carbon sequestered by vegetation in the Rockies. To date, there have been few atmospheric CO2 observations in the American Rockies due to a combination of difficulties associated with logistics and interpretation of the measurements in the midst of complex terrain. Among the few sites are those associated with NCAR's Regional Atmospheric Continuous CO2 Network in the Rocky Mountains (Rocky RACCOON). As CO2 observations in mountainous areas increase in the future, it is imperative that they can be properly interpreted to yield information about biospheric carbon fluxes. In this paper, we will present CO2 observations from RACCOON, along with atmospheric simulations that attempt to extract information about biospheric carbon fluxes in the Western U.S. from these observations. We show that atmospheric models can significantly misinterpret the CO2 observations, leading to large errors in the retrieved biospheric fluxes, due to erroneous atmospheric flows. Recommendations for ways to minimize such errors and properly link the CO2 concentrations to biospheric fluxes are discussed.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014AGUFMEP13A3503O','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014AGUFMEP13A3503O"><span>Evolution of Fine-Grained Channel Margin Deposits behind Large Woody Debris in an Experimental Gravel-Bed Flume</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>ONeill, B.; Marks, S.; Skalak, K.; Puleo, J. A.; Wilcock, P. R.; Pizzuto, J. E.</p> <p>2014-12-01</p> <p>Fine grained channel margin (FGCM) deposits of the South River, Virginia sequester a substantial volume of fine-grained sediment behind large woody debris (LWD). FGCM deposits were created in a laboratory setting meant to simulate the South River environment using a recirculating flume (15m long by 0.6m wide) with a fixed gravel bed and adjustable slope (set to 0.0067) to determine how fine sediment is transported and deposited behind LWD. Two model LWD structures were placed 3.7 m apart on opposite sides of the flume. A wire mesh screen with attached wooden dowels simulated LWD with an upstream facing rootwad. Six experiments with three different discharge rates, each with low and high sediment concentrations, were run. Suspended sediment was very fine grained (median grain size of 3 phi) and well sorted (0.45 phi) sand. Upstream of the wood, water depths averaged about 0.08m, velocities averaged about 0.3 m/s, and Froude numbers averaged around 0.3. Downstream of the first LWD structure, velocities were reduced tenfold. Small amounts of sediment passed through the rootwad and fell out of suspension in the area of reduced flow behind LWD, but most of the sediment was carried around the LWD by the main flow and then behind the LWD by a recirculating eddy current. Upstream migrating dunes formed behind LWD due to recirculating flow, similar to reattachment bars documented in bedrock canyon rivers partially obstructed by debouching debris fans. These upstream migrating dunes began at the reattachment point and merged with deposits formed from sediment transported through the rootwad. Downstream migrating dunes formed along the channel margin behind the LWD, downstream of the reattachment point. FGCM deposits were about 3 m long, with average widths of about 0.8 m. Greater sediment concentration created thicker FGCM deposits, and higher flows eroded the sides of the deposits, reducing their widths.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26788665','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26788665"><span>Changes in soil organic carbon fractions after remediation of a coastal floodplain soil.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Wong, V N L; McNaughton, C; Pearson, A</p> <p>2016-03-01</p> <p>Coastal floodplain soils and wetland sediments can store large amounts of soil organic carbon (SOC). These environments are also commonly underlain by sulfidic sediments which can oxidise to form coastal acid sulfate soils (CASS) and contain high concentrations of acidity and trace metals. CASS are found on every continent globally except Antarctica. When sulfidic sediments are oxidised, scalds can form, which are large bare patches without vegetation. However, SOC stocks and fractions have not been quantified in these coastal floodplain environments. We studied the changes in soil geochemistry and SOC stocks and fractions three years after remediation of a CASS scald. Remediation treatments included raising water levels, and addition of either lime (LO) or lime and mulch (LM) relative to a control (C) site. We found SOC concentrations in the remediated sites (LO and LM) were more than double than that found at site C, reflected in the higher SOC stocks to a depth of 1.6 m (426 Mg C/ha, 478 Mg C/ha and 473 Mg C/ha at sites C, LO and LM, respectively). The particulate organic C (POC) fraction was higher at sites LO and LM due to increased vegetation and biomass inputs, compared to site C. Reformation of acid volatile sulfide (AVS) occurred throughout the profile at site LM, whereas only limited AVS reformation occurred at sites LO and C. Higher AVS at site LM may be linked to the additional source of organic matter provided by the mulch. POC can also potentially contribute to decreasing acidity as a labile SOC source for Fe(3+) and SO4(2-) reduction. Therefore, coastal floodplains and wetlands are a large store of SOC and can potentially increase SOC following remediation due to i) reduced decomposition rates with higher water levels and waterlogging, and ii) high C inputs due to rapid revegetation of scalded areas and high rates of biomass production. These results highlight the importance of maintaining vegetation cover in coastal floodplains and wetlands for sequestering SOC. Crown Copyright © 2015. Published by Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/21639042','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/21639042"><span>Historical carbon emissions and uptake from the agricultural frontier of the Brazilian Amazon.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Galford, Gillian L; Melillo, Jerry M; Kicklighter, David W; Mustard, John F; Cronin, Timothy W; Cerri, Carlos E P; Cerri, Carlos C</p> <p>2011-04-01</p> <p>Tropical ecosystems play a large and complex role in the global carbon cycle. Clearing of natural ecosystems for agriculture leads to large pulses of CO2 to the atmosphere from terrestrial biomass. Concurrently, the remaining intact ecosystems, especially tropical forests, may be sequestering a large amount of carbon from the atmosphere in response to global environmental changes including climate changes and an increase in atmospheric CO2. Here we use an approach that integrates census-based historical land use reconstructions, remote-sensing-based contemporary land use change analyses, and simulation modeling of terrestrial biogeochemistry to estimate the net carbon balance over the period 1901-2006 for the state of Mato Grosso, Brazil, which is one of the most rapidly changing agricultural frontiers in the world. By the end of this period, we estimate that of the state's 925 225 km2, 221 092 km2 have been converted to pastures and 89 533 km2 have been converted to croplands, with forest-to-pasture conversions being the dominant land use trajectory but with recent transitions to croplands increasing rapidly in the last decade. These conversions have led to a cumulative release of 4.8 Pg C to the atmosphere, with 80% from forest clearing and 20% from the clearing of cerrado. Over the same period, we estimate that the residual undisturbed ecosystems accumulated 0.3 Pg C in response to CO2 fertilization. Therefore, the net emissions of carbon from Mato Grosso over this period were 4.5 Pg C. Net carbon emissions from Mato Grosso since 2000 averaged 146 Tg C/yr, on the order of Brazil's fossil fuel emissions during this period. These emissions were associated with the expansion of croplands to grow soybeans. While alternative management regimes in croplands, including tillage, fertilization, and cropping patterns promote carbon storage in ecosystems, they remain a small portion of the net carbon balance for the region. This detailed accounting of a region's carbon balance is the type of foundation analysis needed by the new United Nations Collaborative Programmme for Reducing Emissions from Deforestation and Forest Degradation (REDD).</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/8744009','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/8744009"><span>Regional myocardial oxygen tension: 19F MRI of sequestered perfluorocarbon.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Shukla, H P; Mason, R P; Bansal, N; Antich, P P</p> <p>1996-06-01</p> <p>A novel noninvasive method of measuring local myocardial oxygen tension (pO2) in the perfused rat heart using 19F MRI is demonstrated. Tissue pO2 was determined on the basis of the 19F spin-lattice relaxation rate (R1) of perflubron (perfluorooctyl bromide) sequestered in the heart after IV infusion of an emulsion. Spectroscopic measurement of R1 was previously used to measure a global weighted average of oxygen status. 19F MRI now provides 3D spatial resolution indicating local cardiac pO2 under normally perfused, globally ischemic, and regionally ischemic conditions.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=540225','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=540225"><span>UBF-binding site arrays form pseudo-NORs and sequester the RNA polymerase I transcription machinery</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Mais, Christine; Wright, Jane E.; Prieto, José-Luis; Raggett, Samantha L.; McStay, Brian</p> <p>2005-01-01</p> <p>Human ribosomal genes (rDNA) are located in nucleolar organizer regions (NORs) on the short arms of acrocentric chromosomes. Metaphase NORs that were transcriptionally active in the previous cell cycle appear as prominent chromosomal features termed secondary constrictions that are achromatic in chromosome banding and positive in silver staining. The architectural RNA polymerase I (pol I) transcription factor UBF binds extensively across rDNA throughout the cell cycle. To determine if UBF binding underpins NOR structure, we integrated large arrays of heterologous UBF-binding sequences at ectopic sites on human chromosomes. These arrays efficiently recruit UBF even to sites outside the nucleolus and, during metaphase, form novel silver stainable secondary constrictions, termed pseudo-NORs, morphologically similar to NORs. We demonstrate for the first time that in addition to UBF the other components of the pol I machinery are found associated with sequences across the entire human rDNA repeat. Remarkably, a significant fraction of these same pol I factors are sequestered by pseudo-NORs independent of both transcription and nucleoli. Because of the heterologous nature of the sequence employed, we infer that sequestration is mediated primarily by protein–protein interactions with UBF. These results suggest that extensive binding of UBF is responsible for formation and maintenance of the secondary constriction at active NORs. Furthermore, we propose that UBF mediates recruitment of the pol I machinery to nucleoli independently of promoter elements. PMID:15598984</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4598876','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4598876"><span>Structure of the DBL3X-DBL4ε region of the VAR2CSA placental malaria vaccine candidate: insight into DBL domain interactions</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Gangnard, Stéphane; Lewit-Bentley, Anita; Dechavanne, Sébastien; Srivastava, Anand; Amirat, Faroudja; Bentley, Graham A.; Gamain, Benoît</p> <p>2015-01-01</p> <p>The human malaria parasite, Plasmodium falciparum, is able to evade spleen-mediated clearing from blood stream by sequestering in peripheral organs. This is due to the adhesive properties conferred by the P. falciparum Erythrocyte Membrane Protein 1 (PfEMP1) family exported by the parasite to the surface of infected erythrocytes. Expression of the VAR2CSA variant of PfEMP1 leads to pregnancy-associated malaria, which occurs when infected erythrocytes massively sequester in the placenta by binding to low-sulfated Chondroitin Sulfate A (CSA) present in the intervillous spaces. VAR2CSA is a 350 kDa protein that carries six Duffy-Binding Like (DBL) domains, one Cysteine-rich Inter-Domain Regions (CIDR) and several inter-domain regions. In the present paper, we report for the first time the crystal structure at 2.9 Å of a VAR2CSA double domain, DBL3X-DBL4ε, from the FCR3 strain. DBL3X and DBL4ε share a large contact interface formed by residues that are invariant or highly conserved in VAR2CSA variants, which suggests that these two central DBL domains (DBL3X-DBL4ε) contribute significantly to the structuring of the functional VAR2CSA extracellular region. We have also examined the antigenicity of peptides corresponding to exposed loop regions of the DBL4ε structure. PMID:26450557</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013AGUFM.B33J0602H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013AGUFM.B33J0602H"><span>The impact of extreme drought on the biofuel feedstock production</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>hussain, M.; Zeri, M.; Bernacchi, C.</p> <p>2013-12-01</p> <p>Miscanthus (Miscanthus x giganteus) and Switchgrass (Panicum virgatum) have been identified as the primary targets for second-generation cellulosic biofuel crops. Prairie managed for biomass is also considered as one of the alternative to conventional biofuel and promised to provide ecosystem services, including carbon sequestration. These perennial grasses possess a number of traits that make them desirable biofuel crops and can be cultivated on marginal lands or interspersed with maize and soybean in the Corn Belt region. The U.S. Corn Belt region is the world's most productive and expansive maize-growing region, approximately 20% of the world's harvested corn hectares are found in 12 Corn Belt states. The introduction of a second generation cellulosic biofuels for biomass production in a landscape dominated by a grain crop (maize) has potential implications on the carbon and water cycles of the region. This issue is further intensified by the uncertainty in the response of the vegetation to the climate change induced drought periods, as was seen during the extreme droughts of 2011 and 2012 in the Midwest. The 2011 and 2012 growing seasons were considered driest since the 1932 dust bowl period; temperatures exceeded 3.0 °C above the 50- year mean and precipitation deficit reached 50 %. The major objective of this study was to evaluate the drought responses (2011 and 2012) of corn and perennial species at large scale, and to determine the seasonability of carbon and water fluxes in the response of controlling factors. We measured net CO2 ecosystem exchange (NEE) and water fluxes of maize-maize-soybean, and perennial species such as miscanthus, switchgrass and mixture of prairie grasses, using eddy covariance in the University of Illinois energy farm at Urbana, IL. The data presented here were for 5 years (2008- 2012). In the first two years, higher NEE in maize led to large CO2 sequestration. NEE however, decreased in dry years, particularly in 2012. On the other hand, miscanthus, switchgrass, and to a lesser extent, prairie showed higher NEE and gross primary production (GPP) - a partitioned NEE component - than maize during 2012. Although miscanthus uses more water relative to maize (consumed 30 % more water), Net Ecosystem Carbon Balance (NECB) results show that it provides the greatest net benefits of sequestering atmospheric CO2 during drought. Our findings highlight the important role of perennial species in sustaining productivity and sequestering CO2 during drought, as compared to maize. We conclude that changing land use from row crops to perennial species will result in more sequestered carbon, even with drought stress, and will be more resilient to prolonged dry periods.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/21157018','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/21157018"><span>Aluminum and Alzheimer's disease: after a century of controversy, is there a plausible link?</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Tomljenovic, Lucija</p> <p>2011-01-01</p> <p>The brain is a highly compartmentalized organ exceptionally susceptible to accumulation of metabolic errors. Alzheimer's disease (AD) is the most prevalent neurodegenerative disease of the elderly and is characterized by regional specificity of neural aberrations associated with higher cognitive functions. Aluminum (Al) is the most abundant neurotoxic metal on earth, widely bioavailable to humans and repeatedly shown to accumulate in AD-susceptible neuronal foci. In spite of this, the role of Al in AD has been heavily disputed based on the following claims: 1) bioavailable Al cannot enter the brain in sufficient amounts to cause damage, 2) excess Al is efficiently excreted from the body, and 3) Al accumulation in neurons is a consequence rather than a cause of neuronal loss. Research, however, reveals that: 1) very small amounts of Al are needed to produce neurotoxicity and this criterion is satisfied through dietary Al intake, 2) Al sequesters different transport mechanisms to actively traverse brain barriers, 3) incremental acquisition of small amounts of Al over a lifetime favors its selective accumulation in brain tissues, and 4) since 1911, experimental evidence has repeatedly demonstrated that chronic Al intoxication reproduces neuropathological hallmarks of AD. Misconceptions about Al bioavailability may have misled scientists regarding the significance of Al in the pathogenesis of AD. The hypothesis that Al significantly contributes to AD is built upon very solid experimental evidence and should not be dismissed. Immediate steps should be taken to lessen human exposure to Al, which may be the single most aggravating and avoidable factor related to AD.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/274159','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/274159"><span>Phytoremediation: using green plants to clean up contaminate soil, groundwater, and wastewater</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Negri, M.C.; Hinchman, R.R.; Gatliff, E.G.</p> <p>1996-07-01</p> <p>Phytoremediation, an emerging cleanup technology for contaminated soils, groundwater, and wastewater that is both low-tech and low-cost, is defined as the engineered use of green plants (including grasses, forbs, and woody species) to remove, contain, or render harmless such environmental contaminants as heavy metals, trace elements, organic compounds and radioactive compounds in soil or water. Our research includes a successful field demonstration of a plant bioreactor for processing the salty wastewater from petroleum wells; the demonstration is currently under way at a natural gas well site in Oklahoma, in cooperation with Devon Energy Corporation. A greenhouse experiment on zinc uptakemore » in hybrid poplar (Populus sp.) was initiated in 1995. These experiments are being conducted to confirm and extend field data indicating high levels of zinc (4,200 ppm) in leaves of hybrid poplar growing as a cleanup system at a site with zinc contamination in the root zone of some of the trees. Analyses of soil water from experimental pots that had received several doses of zinc indicated that the zinc was totally sequestered by the plants in about 4 hours during a single pass through the root system. The data also showed concentrations of sequestered metal of >38,000 ppm Zn in the dry root tissue. These levels of sequestered zinc exceed the levels found in either roots or tops of many of the known ``hyperaccumulator`` species. Because the roots sequester most of the contaminant taken up in most plants, a major objective of this program is to determine the feasibility of root harvesting as a method to maximize the removal of contaminants from soils. Available techniques and equipment for harvesting plant roots, including young tree roots, are being evaluated and modified as necessary for use with phytoremediation plants.« less</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li class="active"><span>13</span></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_13 --> <div id="page_14" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li class="active"><span>14</span></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="261"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4895795','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4895795"><span>North Atlantic Deep Water Production during the Last Glacial Maximum</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Howe, Jacob N. W.; Piotrowski, Alexander M.; Noble, Taryn L.; Mulitza, Stefan; Chiessi, Cristiano M.; Bayon, Germain</p> <p>2016-01-01</p> <p>Changes in deep ocean ventilation are commonly invoked as the primary cause of lower glacial atmospheric CO2. The water mass structure of the glacial deep Atlantic Ocean and the mechanism by which it may have sequestered carbon remain elusive. Here we present neodymium isotope measurements from cores throughout the Atlantic that reveal glacial–interglacial changes in water mass distributions. These results demonstrate the sustained production of North Atlantic Deep Water under glacial conditions, indicating that southern-sourced waters were not as spatially extensive during the Last Glacial Maximum as previously believed. We demonstrate that the depleted glacial δ13C values in the deep Atlantic Ocean cannot be explained solely by water mass source changes. A greater amount of respired carbon, therefore, must have been stored in the abyssal Atlantic during the Last Glacial Maximum. We infer that this was achieved by a sluggish deep overturning cell, comprised of well-mixed northern- and southern-sourced waters. PMID:27256826</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2752952','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2752952"><span>Light-Dependent Redistribution of Arrestin in Vertebrate Rods Is an Energy-Independent Process Governed by Protein-Protein Interactions</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Nair, K. Saidas; Hanson, Susan M.; Mendez, Ana; Gurevich, Eugenia V.; Kennedy, Matthew J.; Shestopalov, Valery I.; Vishnivetskiy, Sergey A.; Chen, Jeannie; Hurley, James B.; Gurevich, Vsevolod V.; Slepak, Vladlen Z.</p> <p>2009-01-01</p> <p>Summary In rod photoreceptors, arrestin localizes to the outer segment (OS) in the light and to the inner segment (IS) in the dark. Here, we demonstrate that redistribution of arrestin between these compartments can proceed in ATP-depleted photoreceptors. Translocation of transducin from the IS to the OS also does not require energy, but depletion of ATP or GTP inhibits its reverse movement. A sustained presence of activated rhodopsin is required for sequestering arrestin in the OS, and the rate of arrestin relocalization to the OS is determined by the amount and the phosphorylation status of photolyzed rhodopsin. Interaction of arrestin with microtubules is increased in the dark. Mutations that enhance arrestin-microtubule binding attenuate arrestin translocation to the OS. These results indicate that the distribution of arrestin in rods is controlled by its dynamic interactions with rhodopsin in the OS and microtubules in the IS and that its movement occurs by simple diffusion. PMID:15944125</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/552091-packaging-induced-failure-semiconductor-lasers-optical-telecommunications-components','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/552091-packaging-induced-failure-semiconductor-lasers-optical-telecommunications-components"><span>Packaging-induced failure of semiconductor lasers and optical telecommunications components</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Sharps, J.A.</p> <p>1996-12-31</p> <p>Telecommunications equipment for field deployment generally have specified lifetimes of > 100,000 hr. To achieve this high reliability, it is common practice to package sensitive components in hermetic, inert gas environments. The intent is to protect components from particulate and organic contamination, oxidation, and moisture. However, for high power density 980 nm diode lasers used in optical amplifiers, the authors found that hermetic, inert gas packaging induced a failure mode not observed in similar, unpackaged lasers. They refer to this failure mode as packaging-induced failure, or PIF. PIF is caused by nanomole amounts of organic contamination which interact with highmore » intensity 980 nm light to form solid deposits over the emitting regions of the lasers. These deposits absorb 980 nm light, causing heating of the laser, narrowing of the band gap, and eventual thermal runaway. The authors have found PIF is averted by packaging with free O{sub 2} and/or a getter material that sequesters organics.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/14962387','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/14962387"><span>Mass spectrometry of Escherichia coli RNA polymerase: interactions of the core enzyme with sigma70 and Rsd protein.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ilag, Leopold L; Westblade, Lars F; Deshayes, Caroline; Kolb, Annie; Busby, Stephen J W; Robinson, Carol V</p> <p>2004-02-01</p> <p>The E. coli RNA polymerase core enzyme is a multisubunit complex of 388,981 Da. To initiate transcription at promoters, the core enzyme associates with a sigma subunit to form holo RNA polymerase. Here we have used nanoflow electrospray mass spectrometry, coupled with tandem mass spectrometry, to probe the interaction of the RNA polymerase core enzyme with the most abundant sigma factor, sigma70. The results show remarkably well-resolved spectra for both the core and holo RNA polymerases. The regulator of sigma70, Rsd protein, has previously been identified as a protein that binds to free sigma70. We show that Rsd also interacts with core enzyme. In addition, by adding increasing amounts of Rsd, we show that sigma70 is displaced from holo RNA polymerase, resulting in complexes of Rsd with core and sigma70. The results argue for a model in which Rsd not only sequesters sigma70, but is also an effector of core RNA polymerase.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/11861306','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/11861306"><span>Retrovirally mediated correction of bone marrow-derived mesenchymal stem cells from patients with mucopolysaccharidosis type I.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Baxter, Melissa A; Wynn, Robert F; Deakin, Jonathan A; Bellantuono, Ilaria; Edington, Kirsten G; Cooper, Alan; Besley, Guy T N; Church, Heather J; Wraith, J Ed; Carr, Trevor F; Fairbairn, Leslie J</p> <p>2002-03-01</p> <p>We have investigated the utility of bone marrow-derived mesenchymal stem cells (MSCs) as targets for gene therapy of the autosomal recessive disorder mucopolysaccharidosis type IH (MPS-IH, Hurler syndrome). Cultures of MSCs were initially exposed to a green fluorescent protein-expressing retrovirus. Green fluorescent protein-positive cells maintained their proliferative and differentiation capacity. Next we used a vector encoding alpha-L-iduronidase (IDUA), the enzyme that is defective in MPS-IH. Following transduction, MPS-IH MSCs expressed high levels of IDUA and secreted supernormal levels of this enzyme into the extracellular medium. Exogenous IDUA expression led to a normalization of glycosaminoglycan storage in MPS-IH cells, as evidenced by a dramatic decrease in the amount of (35)SO(4) sequestered within the heparan sulfate and dermatan sulfate compartments of these cells. Finally, gene-modified MSCs were able to cross-correct the enzyme defect in untransduced MPS-IH fibroblasts via protein transfer.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/985247','DOE-PATENT-XML'); return false;" href="https://www.osti.gov/servlets/purl/985247"><span>Method of detecting leakage from geologic formations used to sequester CO.sub.2</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/doepatents">DOEpatents</a></p> <p>White, Curt [Pittsburgh, PA; Wells, Arthur [Bridgeville, PA; Diehl, J Rodney [Pittsburgh, PA; Strazisar, Brian [Venetia, PA</p> <p>2010-04-27</p> <p>The invention provides methods for the measurement of carbon dioxide leakage from sequestration reservoirs. Tracer moieties are injected along with carbon dioxide into geological formations. Leakage is monitored by gas chromatographic analyses of absorbents. The invention also provides a process for the early leak detection of possible carbon dioxide leakage from sequestration reservoirs by measuring methane (CH.sub.4), ethane (C.sub.2H.sub.6), propane (C.sub.3H.sub.8), and/or radon (Rn) leakage rates from the reservoirs. The invention further provides a method for branding sequestered carbon dioxide using perfluorcarbon tracers (PFTs) to show ownership.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/16377188','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/16377188"><span>Novel endotoxin-sequestering compounds with terephthalaldehyde-bis-guanylhydrazone scaffolds.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Khownium, Kriangsak; Wood, Stewart J; Miller, Kelly A; Balakrishna, Rajalakshmi; Nguyen, Thuan B; Kimbrell, Matthew R; Georg, Gunda I; David, Sunil A</p> <p>2006-03-01</p> <p>We have shown that lipopolyamines bind to the lipid A moiety of lipopolysaccharide, a constituent of Gram-negative bacterial membranes, and neutralize its toxicity in animal models of endotoxic shock. In an effort to identify non-polyamine scaffolds with similar endotoxin-recognizing features, we had observed an unusually high frequency of hits containing guanylhydrazone scaffolds in high-throughput screens. We now describe the syntheses and preliminary structure-activity relationships in a homologous series of bis-guanylhydrazone compounds decorated with hydrophobic functionalities. These first-generation compounds bind and neutralize lipopolysaccharide with a potency comparable to that of polymyxin B, a peptide antibiotic known to sequester LPS.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/12460485','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/12460485"><span>Forests, carbon and global climate.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Malhi, Yadvinder; Meir, Patrick; Brown, Sandra</p> <p>2002-08-15</p> <p>This review places into context the role that forest ecosystems play in the global carbon cycle, and their potential interactions with climate change. We first examine the natural, preindustrial carbon cycle. Every year forest gross photosynthesis cycles approximately one-twelfth of the atmospheric stock of carbon dioxide, accounting for 50% of terrestrial photosynthesis. This cycling has remained almost constant since the end of the last ice age, but since the Industrial Revolution it has undergone substantial disruption as a result of the injection of 480 PgC into the atmosphere through fossil-fuel combustion and land-use change, including forest clearance. In the second part of this paper we review this 'carbon disruption', and its impact on the oceans, atmosphere and biosphere. Tropical deforestation is resulting in a release of 1.7 PgC yr(-1) into the atmosphere. However, there is also strong evidence for a 'sink' for carbon in natural vegetation (carbon absorption), which can be explained partly by the regrowth of forests on abandoned lands, and partly by a global change factor, the most likely cause being 'fertilization' resulting from the increase in atmospheric CO(2). In the 1990s this biosphere sink was estimated to be sequestering 3.2 PgC yr(-1) and is likely to have substantial effects on the dynamics, structure and biodiversity of all forests. Finally, we examine the potential for forest protection and afforestation to mitigate climate change. An extensive global carbon sequestration programme has the potential to make a particularly significant contribution to controlling the rise in CO2 emissions in the next few decades. In the course of the whole century, however, even the maximum amount of carbon that could be sequestered will be dwarfed by the magnitude of (projected) fossil-fuel emissions. Forest carbon sequestration should only be viewed as a component of a mitigation strategy, not as a substitute for the changes in energy supply, use and technology that will be required if atmospheric CO(2) concentrations are to be stabilized.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28455771','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28455771"><span>Cadmium and zinc activate adaptive mechanisms in Nicotiana tabacum similar to those observed in metal tolerant plants.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Vera-Estrella, Rosario; Gómez-Méndez, María F; Amezcua-Romero, Julio C; Barkla, Bronwyn J; Rosas-Santiago, Paul; Pantoja, Omar</p> <p>2017-09-01</p> <p>Tobacco germinated and grew in the presence of high concentrations of cadmium and zinc without toxic symptoms. Evidence suggests that these ions are sequestered into the vacuole by heavy metal/H + exchanger mechanisms. Heavy metal hyperaccumulation and hypertolerance are traits shared by a small set of plants which show specialized physiological and molecular adaptations allowing them to accumulate and sequester toxic metal ions. Nicotiana tabacum was used to test its potential as a metal-accumulator in a glass house experiment. Seed germination was not affected in the presence of increasing concentrations of zinc and cadmium. Juvenile and adult plants could concentrate CdCl 2 and ZnSO 4 to levels exceeding those in the hydroponic growth medium and maintained or increased their leaf dry weight when treated with 0.5- or 1-mM CdCl 2 or 1-mM ZnSO 4 for 5 days. Accumulation of heavy metals did not affect the chlorophyll and carotenoid levels, while variable effects were observed in cell sap osmolarity. Heavy metal-dependent H + transport across the vacuole membrane was monitored using quinacrine fluorescence quenching. Cadmium- or zinc-dependent fluorescence recovery revealed that increasing concentrations of heavy metals stimulated the activities of the tonoplast Cd 2+ or Zn 2+ /H + exchangers. Immunodetection of the V-ATPase subunits showed that the increased proton transport by zinc was not due to changes in protein amount. MTP1 and MTP4 immunodetection and semiquantitative RT-PCR of NtMTP1, NtNRAMP1, and NtZIP1 helped to identify the genes that are likely involved in sequestration of cadmium and zinc in the leaf and root tissue. Finally, we demonstrated that cadmium and zinc treatments induced an accumulation of zinc in leaf tissues. This study shows that N. tabacum possesses a hyperaccumulation response, and thus could be used for phytoremediation purposes.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/394091-transient-neutropenia-neutrophil-distribution-replacement','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/394091-transient-neutropenia-neutrophil-distribution-replacement"><span>Transient neutropenia: Neutrophil distribution and replacement</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Thakur, M.L.; Li, Jinghua; Binoy, Li</p> <p></p> <p>Radiolabeled polymorphonuclear (PMN) receptor-specific proteins or peptides lead the list of agents being evaluated for imaging inflammatory foci. Some of these agents induce transient neutropenia. This study was designed to quantify the degree of dose dependency of neutropenia, determine the duration of neutropenia, identify the organs in which these PMNs sequester and ascertain if these PMNs return to the circulation. Rodent anti-PMN (Gr-1) MAb RB6-8C5 (lgG-2A) and Balb/c mice served as the model, and PMN nonspecific ME 31.3 (lgG-2A) as a control. Circulating PMN number was determined several times, 30 min prior to and between 1 min and 120 hrmore » after MAb administration. Iodine-125-MAbs provided quantification of circulating activity and tissue distribution as a function of time. Data showed the severity of neutropenia increased with the amount of MAb administered (>95% PMNs lost after 150 {mu}g versus <85% after 10 {mu}g). Moreover, the recovery time for PMN counts to reach the pretreatment level also increased in a dose-dependent manner (96 hr at 150 {mu}g versus 4 hr at 10 {mu}g and 2 hr at 2 {mu}g). The blood activity, however, which declined quickly with the neutropenia, never rose again with PMN recovery. As a function of time, radioactivity in the study group decreased from all organs except from the liver and spleen, whereas in the control group; and spleen, 15.5% decrease versus 63.6% decrease in control group. The degree and duration of neutropenia is dose-dependent. PMNs, lost from the circulation, sequester in the reticuloendothelial system, and do not return to circulation. Therefore, they are not available to image inflammatory foci. The PMN concentration is restored to a pretreatment level in a dose-dependent fashion, presumably by freshly released PMNs from bone marrow. 32 refs., 5 figs.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/1006919-simple-host-guest-chemistry-modulate-process-concentration-crystallization-membrane-proteins-detergent-capture-microfluidic-device','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/1006919-simple-host-guest-chemistry-modulate-process-concentration-crystallization-membrane-proteins-detergent-capture-microfluidic-device"><span></span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Li, Liang; Nachtergaele, Sigrid; Seddon, Annela M.</p> <p></p> <p>This paper utilizes cyclodextrin-based host-guest chemistry in a microfluidic device to modulate the crystallization of membrane proteins and the process of concentration of membrane protein samples. Methyl-{beta}-cyclodextrin (MBCD) can efficiently capture a wide variety of detergents commonly used for the stabilization of membrane proteins by sequestering detergent monomers. Reaction Center (RC) from Blastochloris viridis was used here as a model system. In the process of concentrating membrane protein samples, MBCD was shown to break up free detergent micelles and prevent them from being concentrated. The addition of an optimal amount of MBCD to the RC sample captured loosely bound detergentmore » from the protein-detergent complex and improved sample homogeneity, as characterized by dynamic light scattering. Using plug-based microfluidics, RC crystals were grown in the presence of MBCD, giving a different morphology and space group than crystals grown without MBCD. The crystal structure of RC crystallized in the presence of MBCD was consistent with the changes in packing and crystal contacts hypothesized for removal of loosely bound detergent. The incorporation of MBCD into a plug-based microfluidic crystallization method allows efficient use of limited membrane protein sample by reducing the amount of protein required and combining sparse matrix screening and optimization in one experiment. The use of MBCD for detergent capture can be expanded to develop cyclodextrin-derived molecules for fine-tuned detergent capture and thus modulate membrane protein crystallization in an even more controllable way.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22062097','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22062097"><span>The use and control of nitrate and nitrite for the processing of meat products.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Honikel, Karl-Otto</p> <p>2008-01-01</p> <p>Nitrate and nitrite are used for the purpose of curing meat products. In most countries the use of both substances, usually added as potassium or sodium salts, is limited. Either the ingoing or the residual amounts are regulated by laws. The effective substance is nitrite acting primarily as an inhibitor for some microorganisms. Nitrite added to a batter of meat is partially oxidized to nitrate by sequestering oxygen - thus it acts as an antioxidant - a part of nitrite is bound to myoglobin, forming the heat stable NO-myoglobin, a part is bound to proteins or other substances in meat. Nitrate may be reduced to nitrite in raw meat products by microorganisms. As oxidation and reduction may occur the concentrations of nitrite plus nitrate in a product has to be controlled and measured especially if the residual amounts are regulated. This sum of both compounds is important for the human body. Intake of nitrate with food leads to its absorption over the digestive tract into the blood. In the oral cavity nitrate appears again where it is reduced to nitrite. With the saliva the nitrite is mixed with food, having the same effect as nitrite in a batter (inhibiting growth of some pathogenic microorganisms) and swallowed. In the stomach nitrite can eventually form carcinogenic nitrosamines in the acidic environment.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26436679','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26436679"><span>Wheat leaf lipids during heat stress: I. High day and night temperatures result in major lipid alterations.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Narayanan, Sruthi; Tamura, Pamela J; Roth, Mary R; Prasad, P V Vara; Welti, Ruth</p> <p>2016-04-01</p> <p>Understanding how wheat (Triticum aestivum L.) plants under high temperature (HT) regulate lipid composition is critical to developing climate-resilient varieties. We measured 165 glycerolipids and sterol derivatives under optimum and high day and night temperatures in wheat leaves using electrospray ionization-tandem mass spectrometry. Levels of polar lipid fatty acyl chain unsaturation were lower in both heat-tolerant genotype Ventnor and susceptible genotype Karl 92 under HT, compared with optimum temperature. The lower unsaturation was predominantly because of lower levels of 18:3 acyl chains and higher levels of 18:1 and 16:0 acyl chains. Levels of 18:3-containing triacylglycerols increased threefold/more under HT, consistent with their possible role in sequestering fatty acids during membrane lipid remodelling. Phospholipids containing odd-numbered or oxidized acyl chains accumulated in leaves under HT. Sterol glycosides (SG) and 16:0-acylated sterol glycosides (ASG) were higher under HT than optimum temperatures. Ventnor had lower amounts of phospholipids with oxidized acyl chains under HT and higher amounts of SG and 16:0-ASG than Karl 92. Taken together, the data demonstrate that wheat leaf lipid composition is altered by HT, in which some lipids are particularly responsive to HT, and that two wheat genotypes, chosen for their differing physiological responses to HT, differ in lipid profile under HT. © 2015 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5102054','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5102054"><span>Wheat leaf lipids during heat stress: I. High day and night temperatures result in major lipid alterations</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Narayanan, Sruthi; Tamura, Pamela J.; Roth, Mary R.; Vara Prasad, P.V.; Welti, Ruth</p> <p>2016-01-01</p> <p>Understanding how wheat (Triticum aestivum L.) plants under high temperature (HT) regulate lipid composition is critical to developing climate-resilient varieties. We measured 165 glycerolipids and sterol derivatives under optimum and high day and night temperatures in wheat leaves using electrospray ionization-tandem mass spectrometry. Levels of polar lipid fatty acyl chain unsaturation were lower in both heat-tolerant genotype Ventnor and susceptible genotype Karl 92 under HT, compared to optimum temperature. The lower unsaturation was predominantly due to lower levels of 18:3 and higher levels of 18:1 and 16:0 acyl chains. Levels of 18:3-containing triacylglycerols increased 3-fold/more under HT, consistent with their possible role in sequestering fatty acids during membrane lipid remodeling. Phospholipids containing odd-numbered or oxidized acyl chains accumulated in leaves under HT. Sterol glycosides (SG) and 16:0-acylated sterol glycosides (ASG) were higher under HT than optimum temperatures. Ventnor had lower amounts of phospholipids with oxidized acyl chains under HT and higher amounts of SG and 16:0-ASG than Karl 92. Taken together, the data demonstrate that wheat leaf lipid composition is altered by HT, that some lipids are particularly responsive to HT, and that two wheat genotypes, chosen for their differing physiological responses to HT, differ in lipid profile under HT. PMID:26436679</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/7696854','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/7696854"><span>Chitovibrin: a chitin-binding lectin from Vibrio parahemolyticus.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Gildemeister, O S; Zhu, B C; Laine, R A</p> <p>1994-12-01</p> <p>A novel 134 kDa, calcium-independent chitin-binding lectin, 'chitovibrin', is secreted by the marine bacterium Vibrio parahemolyticus, inducible with chitin or chitin-oligomers. Chitovibrin shows no apparent enzymatic activity but exhibits a strong affinity for chitin and chito-oligomers > dp9. The protein has an isoelectric pH of 3.6, shows thermal tolerance, binds chitin with an optimum at pH 6 and is active in 0-4 M NaCl. Chitovibrin appears to be completely different from other reported Vibrio lectins and may function to bind V. parahemolyticus to chitin substrates, or to capture or sequester chito-oligomers. It may be a member of a large group of recently described proteins in Vibrios related to a complex chitinoclastic (chitinivorous) system.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/1993GBioC...7..305H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/1993GBioC...7..305H"><span>Current land cover in the tropics and its potential for sequestering carbon</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Houghton, R. A.; Unruh, J. D.; Lefebvre, P. A.</p> <p>1993-06-01</p> <p>Emissions of carbon dioxide and other greenhouse gases from human activity are increasing the concentrations of these gases in the atmosphere. The Earth is expected to warm as a result, with consequences that are potentially highly disruptive to human societies. Reductions in the use of fossil fuels and in rates of deforestation worldwide will reduce emissions of CO2, but atmospheric concentrations will continue to increase unless emissions are reduced by more than 60% (about 4.5 billion tons of carbon annually). Reforestation seems to offer one of the few means for reducing the atmospheric concentration of CO2 over periods as short as human generations. We report here an approach for evaluating the potential for reforestation to help stabilize or even reduce the concentration of CO2 in the atmosphere. Reforestation is defined broadly to include tree plantations, natural regrowth of secondary forests, and the practice of agroforestry. Our premise is that human use of the land has generally reduced woody biomass and that such lands have a potential for reaccumulating carbon if appropriately managed. We used published ground studies together with global vegetation index data from the NOAA 7 satellite to estimate current land cover in tropical regions. Then, superimposing this map of current land cover over maps depicting the distribution of vegetation cover prior to human disturbance, we obtained an estimate of about 3200 X 106 ha in the tropics (almost 60% of the total land area considered) where woody biomass had been decreased, and where carbon might again be sequestered. We calculated the amount of carbon that could be withdrawn from the atmosphere and stored in woody biomass if several management options were implemented. Biomass accumulations were determined from forestry statistics. Application of the data on biomass to the areas suitable for accumulation of carbon yielded an estimate of potential accumulation of 160-170 Pg carbon, an amount equivalent to the accumulation of carbon in the atmosphere since the start of the industrial revolution, or to about 25 years of fossil fuel emissions at current rates. Estimates of both area and potential accumulation of carbon were crude, probably not better than ±50%. They are useful for suggesting the role that tropical lands might play in stabilizing atmospheric concentrations of CO2, but they should not be used to suggest specific management options in individual countries. As maps with higher spatial resolution become available, however, the method should provide more precise estimates overall and in specific locations.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFM.B31C0575S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFM.B31C0575S"><span>High-Resolution Remote Sensing and Stable Isotope Patterns Across Heath-Shrub-Forest Ecotone at Abisko and Vassijaure, Northern Sweden</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Schwan, M. R.; Herrick, C.; Hobbie, E. A.; Chen, J.; Varner, R. K.; Palace, M. W.; Marek, E.; Kashi, N. N.; Smith, S. L.</p> <p>2015-12-01</p> <p>Rapid warming in arctic and sub-arctic environments shifts plant community structure which in turn can alter carbon cycling by releasing large stocks of carbon sequestered in arctic soils. Much work has been done in sub-arctic peatlands to understand how shifts in dominant vegetation cover can ultimately affect global carbon balances, but less focus has been given to upland environments where similar changes are occurring. Recent circumpolar expansion of deciduous shrubs and trees in sub-arctic upland environments may alter carbon cycling due to shrubs and trees sequestering less C in soils than the heath plants they typically replace. In this study we explored the relationship between nutrient and carbon cycling and above-ground vegetation on six transects which traverse an ecotone gradient from heath tundra (dominated by ericoid mycorrhizal plants) through deciduous shrubs to deciduous trees (dominated by ectomycorrhizal plants) in upland environments of sub-arctic Sweden near Vassijaure (~850 mm precipitation) and Abisko (~300 mm precipitation). We collected soil and foliage for analysis of natural abundances of stable carbon and nitrogen isotopes (δ13C and δ15N), which can be a sensitive indicator of C and N dynamics. We also took high-resolution remote aerial imagery over the transects to calculate percent cover of vegetation types using GIS software. We concurrently estimated percent cover in smaller plots on the ground of three dominant species, Empetrum nigrum, Betula nana, and Betula pubescens, to serve as ground-truthing for the aerial imagery. Analysis of vegetation cover data shows significant differences in vegetation types along the transects. Preliminary multiple regression analysis of isotopes shows that δ13C in organic soil at the Vassijaure site is mostly controlled by distance along the transect, an interaction term between transect distance and soil depth, and δ15N (adjusted r2 = 0.85, p < 0.0001). Values of δ13C were lower in soils in the shrubs and forest than in the heath. In regression analyses, δ15N was primarily controlled by depth, and secondarily by heath cover (adjusted r2 = 0.68, p < 0.0001). These results suggest that trees and shrubs are sequestering carbon, and interactions between plants and belowground soil communities may be driving nitrogen dynamics.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2018MNRAS.473L..64E','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2018MNRAS.473L..64E"><span>Accreting transition discs with large cavities created by X-ray photoevaporation in C and O depleted discs</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Ercolano, Barbara; Weber, Michael L.; Owen, James E.</p> <p>2018-01-01</p> <p>Circumstellar discs with large dust depleted cavities and vigorous accretion on to the central star are often considered signposts for (multiple) giant planet formation. In this Letter, we show that X-ray photoevaporation operating in discs with modest (factors 3-10) gas-phase depletion of carbon and oxygen at large radii ( > 15 au) yields the inner radius and accretion rates for most of the observed discs, without the need to invoke giant planet formation. We present one-dimensional viscous evolution models of discs affected by X-ray photoevaporation assuming moderate gas-phase depletion of carbon and oxygen, well within the range reported by recent observations. Our models use a simplified prescription for scaling the X-ray photoevaporation rates and profiles at different metallicity, and our quantitative result depends on this scaling. While more rigorous hydrodynamical modelling of mass-loss profiles at low metallicities is required to constrain the observational parameter space that can be explained by our models, the general conclusion that metal sequestering at large radii may be responsible for the observed diversity of transition discs is shown to be robust. Gap opening by giant planet formation may still be responsible for a number of observed transition discs with large cavities and very high accretion rate.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4182016','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4182016"><span>Vaults Engineered for Hydrophobic Drug Delivery</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Buehler, Daniel C.; Toso, Daniel B.; Kickhoefer, Valerie A.; Zhou, Z. Hong</p> <p>2013-01-01</p> <p>The vault nanoparticle is one of the largest known ribonucleoprotein complexes in the sub-100 nm range. Highly conserved and almost ubiquitously expressed in eukaryotes, vaults form a large nanocapsule with a barrel-shaped morphology surrounding a large hollow interior. These properties make vaults an ideal candidate for development into a drug delivery vehicle. In this study, we report the first example of using vaults towards this goal. We engineered recombinant vaults to encapsulate the highly insoluble and toxic hydrophobic compound All-trans Retinoic Acid (ATRA) using a vault binding lipoprotein complex that forms a lipid bilayer nanodisk. These recombinant vaults offer protection to the encapsulated ATRA from external elements. Furthermore, a cryo-electron tomography (cryo-ET) reconstruction shows the vault binding lipoprotein complex sequestered within the vault lumen. Finally, these ATRA loaded vaults have enhanced cytotoxicity against the hepatocellular carcinoma cell line HepG2. The ability to package therapeutic compounds into the vault is an important achievement toward their development into a viable and versatile platform for drug delivery. PMID:21506266</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70134754','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70134754"><span>Energy demands for maintenance, growth, pregnancy, and lactation of female Pacific walruses (Odobenus rosmarus divergens)</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Noren, Shawn R.; Udevitz, Mark S.; Jay, Chadwick V.</p> <p>2014-01-01</p> <p>Decreases in sea ice have altered habitat use and activity patterns of female Pacific walruses Odobenus rosmarus divergens and could affect their energetic demands, reproductive success, and population status. However, a lack of physiological data from walruses has hampered efforts to develop the bioenergetics models required for fully understanding potential population-level impacts. We analyzed long-term longitudinal data sets of caloric consumption and body mass from nine female Pacific walruses housed at six aquaria using a hierarchical Bayesian approach to quantify relative energetic demands for maintenance, growth, pregnancy, and lactation. By examining body mass fluctuations in response to food consumption, the model explicitly uncoupled caloric demand from caloric intake. This is important for pinnipeds because they sequester and deplete large quantities of lipids throughout their lifetimes. Model outputs were scaled to account for activity levels typical of free-ranging Pacific walruses, averaging 83% of the time active in water and 17% of the time hauled-out resting. Estimated caloric requirements ranged from 26,900 kcal d−1 for 2-yr-olds to 93,370 kcal d−1 for simultaneously lactating and pregnant walruses. Daily consumption requirements were higher for pregnancy than lactation, reflecting energetic demands of increasing body size and lipid deposition during pregnancy. Although walruses forage during lactation, fat sequestered during pregnancy sustained 27% of caloric requirements during the first month of lactation, suggesting that walruses use a mixed strategy of capital and income breeding. Ultimately, this model will aid in our understanding of the energetic and population consequences of sea ice loss.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li class="active"><span>14</span></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_14 --> <div id="page_15" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li class="active"><span>15</span></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="281"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/17910061','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/17910061"><span>Energetics of protein homodimerization: effects of water sequestering on the formation of beta-lactoglobulin dimer.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bello, Martiniano; Pérez-Hernández, Gerardo; Fernández-Velasco, D Alejandro; Arreguín-Espinosa, Roberto; García-Hernández, Enrique</p> <p>2008-03-01</p> <p>Transient protein-protein interactions are functionally relevant as a control mechanism in a variety of biological processes. Analysis of the 3D structure of protein-protein complexes indicates that water molecules trapped at the interface are very common; however, their role in the stability and specificity of protein homodimer interactions has been not addressed yet. To provide new insights into the energetic bases that govern the formation of highly hydrated interfaces, the dissociation process of bovine beta lg variant A at a neutral pH was characterized here thermodynamically by conducting dilution experiments with an isothermal titration calorimeter. Association was enthalpically driven throughout the temperature range spanned. DeltaH and deltaC(p) were significantly more negative than estimates based on surface area changes, suggesting the occurrence of effects additional to the dehydration of the contact surfaces between subunits. Near-UV CD spectra proved to be independent of protein concentration, indicating a rigid body-like association. Furthermore, the process proved not to be coupled to significant changes in the protonation state of ionizable groups or counterion exchange. In contrast, both osmotic stress experiments and a computational analysis of the dimer's 3D structure indicated that a large number of water molecules are incorporated into the interface upon association. Numerical estimates considering the contributions of interface area desolvation and water immobilization accounted satisfactorily for the experimental deltaC(p). Thus, our study highlights the importance of explicitly considering the effects of water sequestering to perform a proper quantitative analysis of the formation of homodimers with highly hydrated interfaces. 2007 Wiley-Liss, Inc.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4024869','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4024869"><span>Capping protein regulatory cycle driven by CARMIL and V-1 may promote actin network assembly at protruding edges</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Fujiwara, Ikuko; Remmert, Kirsten; Piszczek, Grzegorz; Hammer, John A.</p> <p>2014-01-01</p> <p>Although capping protein (CP) terminates actin filament elongation, it promotes Arp2/3-dependent actin network assembly and accelerates actin-based motility both in vitro and in vivo. In vitro, capping protein Arp2/3 myosin I linker (CARMIL) antagonizes CP by reducing its affinity for the barbed end and by uncapping CP-capped filaments, whereas the protein V-1/myotrophin sequesters CP in an inactive complex. Previous work showed that CARMIL can readily retrieve CP from the CP:V-1 complex, thereby converting inactive CP into a version with moderate affinity for the barbed end. Here we further clarify the mechanism of this exchange reaction, and we demonstrate that the CP:CARMIL complex created by complex exchange slows the rate of barbed-end elongation by rapidly associating with, and dissociating from, the barbed end. Importantly, the cellular concentrations of V-1 and CP determined here argue that most CP is sequestered by V-1 at steady state in vivo. Finally, we show that CARMIL is recruited to the plasma membrane and only at cell edges undergoing active protrusion. Assuming that CARMIL is active only at this location, our data argue that a large pool of freely diffusing, inactive CP (CP:V-1) feeds, via CARMIL-driven complex exchange, the formation of weak-capping complexes (CP:CARMIL) at the plasma membrane of protruding edges. In vivo, therefore, CARMIL should promote Arp2/3-dependent actin network assembly at the leading edge by promoting barbed-end capping there. PMID:24778263</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5712313','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5712313"><span>Viral Impact in Autoimmune Diseases: Expanding the “X Chromosome–Nucleolus Nexus” Hypothesis</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Brooks, Wesley H.</p> <p>2017-01-01</p> <p>Viruses are suspected of significant roles in autoimmune diseases but the mechanisms are unclear. We get some insight by considering demands a virus places on host cells. Viruses not only require production of their own proteins, RNA and/or DNA, but also production of additional cellular machinery, such as ribosomes, to handle the increased demands. Since the nucleolus is a major site of RNA processing and ribonucleoprotein assembly, nucleoli are targeted by viruses, directly when viral RNA and proteins enter the nucleolus and indirectly when viruses induce increased expression of cellular polyamine genes. Polyamines are at high levels in nucleoli to assist in RNA folding. The size and activity of nucleoli increase directly with increases in polyamines. Nucleolar expansion due to abnormal increases in polyamines could disrupt nearby chromatin, such as the inactive X chromosome, leading to expression of previously sequestered DNA. Sudden expression of a large concentration of Alu elements from the disrupted inactive X can compete with RNA transcripts containing intronic Alu sequences that normally maintain nucleolar structural integrity. Such disruption of nucleolar activity can lead to misfolded RNAs, misassembled ribonucleoprotein complexes, and fragmentation of the nucleolus. Many autoantigens in lupus are, at least transiently, components of the nucleolus. Considering these effects of viruses, the “X chromosome–nucleolus nexus” hypothesis, which proposed disruption of the inactive X by the nucleolus during stress, is now expanded here to propose subsequent disruption of the nucleolus by previously sequestered Alu elements, which can fragment the nucleolus, leading to generation of autoantigens. PMID:29234321</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUFM.B11C0475B','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUFM.B11C0475B"><span>Micrometeorological Observations in a Sierra Nevada Meadow</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Blackburn, D. A.; Oliphant, A. J.</p> <p>2016-12-01</p> <p>Mountain meadows play important roles on watershed and ecosystem services, including improving water quality, moderating runoff and providing biodiversity hotspots. In the Sierra Nevada, mountain meadows are an integral part of the mountain ecosystem and watersheds that impact more than 20 million people. Grazing, logging and other forms of anthropogenic land use in the Sierra Nevada have degraded the functioning of meadows, by altering the morphology, hydrology and vegetation. Existing meandering stream networks become incised and straightened by increased runoff, which effectively lowers the water table and completely alters the ecosystem from moist meadow sedges, grasses, and herbs to dryland grass and shrubs. Given the large growth cycle in healthy meadows, it is also expected that they sequester a significant amount of carbon and enhance atmospheric humidity through evapotranspiration, but relatively little work has been done on the bio-micrometeorology of meadows. The purpose of this study is to assess the growing season carbon, water and energy budgets of a partly degraded meadow in the northern Sierra Nevada. Loney Meadow, located at nearly 2,000 m in the Tahoe National Forest, has been identified as a degraded meadow and is scheduled to undergo restoration work to raise the water table in 2017. A micrometeorological tower with eddy covariance instruments was deployed at the site for most of the snow-free period from May to October 2016. The measurements include: fluxes of CO2, water vapor, surface radiation and energy budget components; ancillary meteorological and soil data; and an automated camera capturing daily images of the meadow surface. The poster will present diurnal and seasonal CO2 on a daily basis with a very rapid increase at the onset of the growing season.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017BGeo...14.2891R','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017BGeo...14.2891R"><span>The effect of drought on dissolved organic carbon (DOC) release from peatland soil and vegetation sources</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Ritson, Jonathan P.; Brazier, Richard E.; Graham, Nigel J. D.; Freeman, Chris; Templeton, Michael R.; Clark, Joanna M.</p> <p>2017-06-01</p> <p>Drought conditions are expected to increase in frequency and severity as the climate changes, representing a threat to carbon sequestered in peat soils. Downstream water treatment works are also at risk of regulatory compliance failures and higher treatment costs due to the increase in riverine dissolved organic carbon (DOC) often observed after droughts. More frequent droughts may also shift dominant vegetation in peatlands from Sphagnum moss to more drought-tolerant species. This paper examines the impact of drought on the production and treatability of DOC from four vegetation litters (Calluna vulgaris, Juncus effusus, Molinia caerulea and Sphagnum spp.) and a peat soil. We found that mild droughts caused a 39.6 % increase in DOC production from peat and that peat DOC that had been exposed to oxygen was harder to remove by conventional water treatment processes (coagulation/flocculation). Drought had no effect on the amount of DOC production from vegetation litters; however large variation was observed between typical peatland species (Sphagnum and Calluna) and drought-tolerant grassland species (Juncus and Molinia), with the latter producing more DOC per unit weight. This would therefore suggest the increase in riverine DOC often observed post-drought is due entirely to soil microbial processes and DOC solubility rather than litter layer effects. Long-term shifts in species diversity may, therefore, be the most important impact of drought on litter layer DOC flux, whereas pulses related to drought may be observed in peat soils and are likely to become more common in the future. These results provide evidence in support of catchment management which increases the resilience of peat soils to drought, such as ditch blocking to raise water tables.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/6271866','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/6271866"><span>Histochemical evidence for the differential surface labeling, uptake, and intracellular transport of a colloidal gold-labeled insulin complex by normal human blood cells.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ackerman, G A; Wolken, K W</p> <p>1981-10-01</p> <p>A colloidal gold-labeled insulin-bovine serum albumin (GIA) reagent has been developed for the ultrastructural visualization of insulin binding sites on the cell surface and for tracing the pathway of intracellular insulin translocation. When applied to normal human blood cells, it was demonstrated by both visual inspection and quantitative analysis that the extent of surface labeling, as well as the rate and degree of internalization of the insulin complex, was directly related to cell type. Further, the pathway of insulin (GIA) transport via round vesicles and by tubulo-vesicles and saccules and its subsequent fate in the hemic cells was also related to cell variety. Monocytes followed by neutrophils bound the greatest amount of labeled insulin. The majority of lymphocytes bound and internalized little GIA, however, between 5-10% of the lymphocytes were found to bind considerable quantities of GIA. Erythrocytes rarely bound the labeled insulin complex, while platelets were noted to sequester large quantities of the GIA within their extracellular canalicular system. GIA uptake by the various types of leukocytic cells appeared to occur primarily by micropinocytosis and by the direct opening of cytoplasmic tubulo-vesicles and saccules onto the cell surface in regions directly underlying surface-bound GIA. Control procedures, viz., competitive inhibition of GIA labeling using an excess of unlabeled insulin in the incubation medium, preincubation of the GIA reagent with an antibody directed toward porcine insulin, and the incorporation of 125I-insulin into the GIA reagent, indicated the specificity and selectivity of the GIA histochemical procedure for the localization of insulin binding sites.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017JGRG..122..145O','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017JGRG..122..145O"><span>Evaluation of a hierarchy of models reveals importance of substrate limitation for predicting carbon dioxide and methane exchange in restored wetlands</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Oikawa, P. Y.; Jenerette, G. D.; Knox, S. H.; Sturtevant, C.; Verfaillie, J.; Dronova, I.; Poindexter, C. M.; Eichelmann, E.; Baldocchi, D. D.</p> <p>2017-01-01</p> <p>Wetlands and flooded peatlands can sequester large amounts of carbon (C) and have high greenhouse gas mitigation potential. There is growing interest in financing wetland restoration using C markets; however, this requires careful accounting of both CO2 and CH4 exchange at the ecosystem scale. Here we present a new model, the PEPRMT model (Peatland Ecosystem Photosynthesis Respiration and Methane Transport), which consists of a hierarchy of biogeochemical models designed to estimate CO2 and CH4 exchange in restored managed wetlands. Empirical models using temperature and/or photosynthesis to predict respiration and CH4 production were contrasted with a more process-based model that simulated substrate-limited respiration and CH4 production using multiple carbon pools. Models were parameterized by using a model-data fusion approach with multiple years of eddy covariance data collected in a recently restored wetland and a mature restored wetland. A third recently restored wetland site was used for model validation. During model validation, the process-based model explained 70% of the variance in net ecosystem exchange of CO2 (NEE) and 50% of the variance in CH4 exchange. Not accounting for high respiration following restoration led to empirical models overestimating annual NEE by 33-51%. By employing a model-data fusion approach we provide rigorous estimates of uncertainty in model predictions, accounting for uncertainty in data, model parameters, and model structure. The PEPRMT model is a valuable tool for understanding carbon cycling in restored wetlands and for application in carbon market-funded wetland restoration, thereby advancing opportunity to counteract the vast degradation of wetlands and flooded peatlands.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27422434','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27422434"><span>Heavy metal accumulation and signal transduction in herbaceous and woody plants: Paving the way for enhancing phytoremediation efficiency.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Luo, Zhi-Bin; He, Jiali; Polle, Andrea; Rennenberg, Heinz</p> <p>2016-11-01</p> <p>Heavy metal (HM)-accumulating herbaceous and woody plants are employed for phytoremediation. To develop improved strategies for enhancing phytoremediation efficiency, knowledge of the microstructural, physiological and molecular responses underlying HM-accumulation is required. Here we review the progress in understanding the structural, physiological and molecular mechanisms underlying HM uptake, transport, sequestration and detoxification, as well as the regulation of these processes by signal transduction in response to HM exposure. The significance of genetic engineering for enhancing phytoremediation efficiency is also discussed. In herbaceous plants, HMs are taken up by roots and transported into the root cells via transmembrane carriers for nutritional ions. The HMs absorbed by root cells can be further translocated to the xylem vessels and unloaded into the xylem sap, thereby reaching the aerial parts of plants. HMs can be sequestered in the cell walls, vacuoles and the Golgi apparatuses. Plant roots initially perceive HM stress and trigger the signal transduction, thereby mediating changes at the molecular, physiological, and microstructural level. Signaling molecules such as phytohormones, reactive oxygen species (ROS) and nitric oxide (NO), modulate plant responses to HMs via differentially expressed genes, activation of the antioxidative system and coordinated cross talk among different signaling molecules. A number of genes participated in HM uptake, transport, sequestration and detoxification have been functionally characterized and transformed to target plants for enhancing phytoremediation efficiency. Fast growing woody plants hold an advantage over herbaceous plants for phytoremediation in terms of accumulation of high HM-amounts in their large biomass. Presumably, woody plants accumulate HMs using similar mechanisms as herbaceous counterparts, but the processes of HM accumulation and signal transduction can be more complex in woody plants. Copyright © 2016 Elsevier Inc. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017ERL....12j4013G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017ERL....12j4013G"><span>Organic carbon storage change in China's urban landfills from 1978-2014</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Ge, Shidong; Zhao, Shuqing</p> <p>2017-10-01</p> <p>China has produced increasingly large quantities of waste associated with its accelerated urbanization and economic development and deposited these wastes into landfills, potentially sequestering carbon. However, the magnitude of the carbon storage in China’s urban landfills and its spatial and temporal change remain unclear. Here, we estimate the total amount of organic carbon (OC) stored in China's urban landfills between 1978 and 2014 using a first order organic matter decomposition model and data compiled from literature review and statistical yearbooks. Our results show that total OC stored in China’s urban landfills increased nearly 68-fold from the 1970s to the 2010s, and reached 225.2-264.5 Tg C (95% confidence interval, hereafter) in 2014. Construction waste was the largest OC pool (128.4-157.5 Tg C) in 2014, followed by household waste (67.7-83.8 Tg C), and sewage sludge was the least (19.7-34.1 Tg C). Carbon stored in urban landfills accounts for more than 10% of the country’s carbon stocks in urban ecosystems. The annual increase (i.e. sequestration rate) of OC in urban landfills in the 2010s (25.1 ± 4.3 Tg C yr-1, mean ± 2SD, hereafter) is equivalent to 1% of China's carbon emissions from fossil fuel combustion and cement production during the same period, but represents about 9% of the total terrestrial carbon sequestration in the country. Our study clearly indicates that OC dynamics in landfills should not be neglected in regional to national carbon cycle studies as landfills not only account for a substantial part of the carbon stored in urban ecosystems but also have a respectable contribution to national carbon sequestration.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/1995GeCoA..59.1895S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/1995GeCoA..59.1895S"><span>Evidence for gammacerane as an indicator of water column stratification</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Sinninghe Damsté, Jaap S.; Kenig, Fabien; Koopmans, Martin P.; Köster, Jürgen; Schouten, Stefan; Hayes, J. M.; de Leeuw, Jan W.</p> <p>1995-05-01</p> <p>A new route for the formation of gammacerane from tetrahymanol is proposed; in addition to dehydration and hydrogenation, sulphurisation and early CS cleavage are shown to be important in the pathway of formation, especially in marine sediments. Evidence is twofold. First, relatively large amounts of the gammacerane skeleton are sequestered in S-rich macromolecular aggregates formed by natural sulphurisation of functionalised lipids. Selective cleavage of polysulphide linkages with MeLi/MeI led to formation of 3-methylthiogammacerane, indicating that the gammacerane skeleton is primarily bound via sulphur at position 3, consistent with the idea that tetrahymanol (or the corresponding ketone) is the precursor for gammacerane. Second, upon mild artificial maturation of two sediments using hydrous pyrolysis, gammacerane is released from S-rich macromolecular aggregates by cleavage of the relatively weak CS bonds. The stable carbon isotopic compositions of gammacerane and lipids derived from primary producers and green sulphur bacteria in both the Miocene Gessoso-solfifera and Upper Jurassic Allgäu Formations indicate that gammacerane is derived from bacterivorous ciliates which were partially feeding on green sulphur bacteria. This demonstrates that anaerobic ciliates living at or below the chemocline are important sources for gammacerane, consistent with the fact that ciliates only biosynthesize tetrahymanol if their diet is deprived of sterols. This leads to the conclusion that gammacerane is an indicator for water column stratification, which solves two current enigmas in gammacerane geochemistry. Firstly, it explains why gammacerane is often found in sediments deposited under hypersaline conditions but is not necessarily restricted to this type of deposits. Secondly, it explains why lacustrine deposits may contain abundant gammacerane since most lakes in the temperate climatic zones are stratified during summer.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFM.B51E1845G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFM.B51E1845G"><span>Organic carbon storage change in China's urban landfills from 1978 to 2014</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Ge, S.; Zhao, S.</p> <p>2017-12-01</p> <p>China has produced increasingly large quantities of waste associated with her accelerated urbanization and economic development and deposited these wastes into landfills potentially sequestering carbon. However, the magnitude of the carbon storage in China's urban landfills and its spatial and temporal change remain unclear. Here, we estimate the total amount of organic carbon (OC) stored in China's urban landfills between 1978 and 2014 using a first order organic matter decomposition model and data compiled from literature review and statistical yearbooks. Our results show that total OC stored in China's urban landfills increased nearly 68 folds from the 1970s to the 2010s, and reached 225.2 - 264.5 Tg C (95% confidence interval, hereafter) in 2014. Construction waste was the largest OC pool (128.4 - 157.5 Tg C) in 2014, followed by household waste (67.7 - 83.8 Tg C), and sewage sludge was the least (19.7 - 34.1 Tg C). Carbon stored in urban landfills accounts for more than 10% of the country's carbon stocks in urban ecosystems. The annual increase (i.e., sequestration rate) of OC in urban landfills in the 2010s (25.1 ± 4.3 Tg C yr-1, mean±2SD, hereafter) is equivalent to 1% of China's carbon emissions from fossil fuel combustion and cement production during the same period, but represents about 9% of the total terrestrial carbon sequestration in the country. Our study clearly indicates that OC dynamics in landfills should not be neglected in regional to national carbon cycle studies as landfills not only account for a substantial part of the carbon stored in urban ecosystems but also contribute respectably to national carbon sequestration.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFMMR44A..05M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFMMR44A..05M"><span>Effect of chemical environment and rock composition on fracture mechanics properties of reservoir lithologies in context of CO2 sequestration</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Major, J. R.; Eichhubl, P.; Callahan, O. A.</p> <p>2015-12-01</p> <p>The coupled chemical and mechanical response of reservoir and seal rocks to injection of CO2 have major implications on the short and long term security of sequestered carbon. Many current numerical models evaluating behavior of reservoirs and seals during and after CO2 injection in the subsurface consider chemistry and mechanics separately and use only simple mechanical stability criteria while ignoring time-dependent failure parameters. CO2 injection irreversibly alters the subsurface chemical environment which can then affect geomechanical properties on a range of time scales by altering rock mineralogy and cements through dissolution, remobilization, and precipitation. It has also been documented that geomechanical parameters such as fracture toughness (KIC) and subcritical index (SCI) are sensitive to chemical environment. Double torsion fracture mechanics testing of reservoir lithologies under controlled environmental conditions relevant to CO2 sequestration show that chemical environment can measurably affect KIC and SCI. This coupled chemical-mechanical behavior is also influenced by rock composition, grains, amount and types of cement, and fabric. Fracture mechanics testing of the Aztec Sandstone, a largely silica-cemented, subarkose sandstone demonstrate it is less sensitive to chemical environment than Entrada Sandstone, a silty, clay-rich sandstone. The presence of de-ionized water lowers KIC by approximately 20% and SCI 30% in the Aztec Sandstone relative to tests performed in air, whereas the Entrada Sandstone shows reductions on the order of 70% and 90%, respectively. These results indicate that rock composition influences the chemical-mechanical response to deformation, and that the relative chemical reactivity of target reservoirs should be recognized in context of CO2 sequestration. In general, inert grains and cements such as quartz will be less sensitive to the changing subsurface environment than carbonates and clays.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014AGUFMGC41D0616F','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014AGUFMGC41D0616F"><span>Links between Plant Invasion, Anthropogenic Nitrogen Enrichment, and Wildfires: A Systematic Review</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Felker-Quinn, E.; Gooding Lassiter, M.; Maxwell, A.; Housego, R.; Young, B.</p> <p>2014-12-01</p> <p>Wildfires can become positive feedbacks in climate change scenarios, because wildfires release large amounts of carbon sequestered in plants and soil to the atmosphere, and because their frequency increases with increasing temperatures. Invasive plants represent an important biotic link between anthropogenic activity and wildfire, as many of these species benefit from human disturbance while increasing fire frequency and severity. A robust body of literature addresses the response of invasive species to nitrogen enrichment, and a separate body of research assesses the feedbacks between invasive plant species and wildfire. We have undertaken a systematic review of these fields in order to evaluate the hypothesis that anthropogenic nitrogen loading contributes to increasing wildfires by promoting the growth and spread of fire-adapted invasive plant species. We identified invasive plant species using the Fire Effects Information System (FEIS), a Forest Service database that evaluates fire ecology of species identified as being of concern by land managers. We used information contained in the FEIS as well as more recent studies to characterize species on a continuum from fire-adapted to fire-intolerant based on traits related to interactions of fire with survival, reproduction, and spread. Of the 107 invasive plant species with fire ecology reports in the FEIS, we have initially classified 18 as fire-adapted, possessing traits that intensify fire regimes. Additionally, 33 species are fire-tolerant, benefiting from fire primarily because it creates a high-resource, low-competition environment. In continuing work, we are evaluating the responses of the invasive plant species to increased anthropogenic nitrogen with a focus on traits such as germination, productivity, and survival, as these traits contribute to wildfire frequency and severity. The views expressed in this abstract are those of the authors and do not necessarily represent the views or policies of the U.S. EPA.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://ntrs.nasa.gov/search.jsp?R=20040089491&hterms=protozoa&qs=Ntx%3Dmode%2Bmatchall%26Ntk%3DAll%26N%3D0%26No%3D60%26Ntt%3Dprotozoa','NASA-TRS'); return false;" href="https://ntrs.nasa.gov/search.jsp?R=20040089491&hterms=protozoa&qs=Ntx%3Dmode%2Bmatchall%26Ntk%3DAll%26N%3D0%26No%3D60%26Ntt%3Dprotozoa"><span>Evidence for gammacerane as an indicator of water column stratification</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://ntrs.nasa.gov/search.jsp">NASA Technical Reports Server (NTRS)</a></p> <p>Sinninghe Damste, J. S.; Kenig, F.; Koopmans, M. P.; Koster, J.; Schouten, S.; Hayes, J. M.; de Leeuw, J. W.</p> <p>1995-01-01</p> <p>A new route for the formation of gammacerane from tetrahymanol is proposed; in addition to dehydration and hydrogenation, sulphurisation and early C-S cleavage are shown to be important in the pathway of formation, especially in marine sediments. Evidence is twofold. First, relatively large amounts of the gammacerane skeleton are sequestered in S-rich macromolecular aggregates formed by natural sulphurisation of functionalised lipids. Selective cleavage of polysulphide linkages with MeLi/MeI led to formation of 3-methylthiogammacerane, indicating that the gammacerane skeleton is primarily bound via sulphur at position 3, consistent with the idea that tetrahymanol (or the corresponding ketone) is the precursor for gammacerane. Second, upon mild artificial maturation of two sediments using hydrous pyrolysis, gammacerane is released from S-rich macromolecular aggregates by cleavage of the relatively weak C-S bonds. The stable carbon isotopic compositions of gammacerane and lipids derived from primary producers and green sulphur bacteria in both the Miocene Gessoso-solfifera and Upper Jurassic Allgau Formations indicate that gammacerane is derived from bacterivorous ciliates which were partially feeding on green sulphur bacteria. This demonstrates that anaerobic ciliates living at or below the chemocline are important sources for gammacerane, consistent with the fact that ciliates only biosynthesize tetrahymanol if their diet is deprived of sterols. This leads to the conclusion that gammacerane is an indicator for water column stratification, which solves two current enigmas in gammacerane geochemistry. Firstly, it explains why gammacerane is often found in sediments deposited under hypersaline conditions but is not necessarily restricted to this type of deposits. Secondly, it explains why lacustrine deposits may contain abundant gammacerane since most lakes in the temperate climatic zones are stratified during summer.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFM.B53D1983H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFM.B53D1983H"><span>Multi-year coupled biogeochemical and biophysical impacts of restoring drained agricultural peatlands to wetlands across the Sacramento-San Joaquin Delta, California, USA.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Hemes, K. S.; Eichelmann, E.; Chamberlain, S.; Knox, S. H.; Oikawa, P.; Sturtevant, C.; Verfaillie, J. G.; Baldocchi, D. D.</p> <p>2017-12-01</p> <p>Globally, delta ecosystems are critical for human livelihoods, but are at increasingly greater risk of degradation. The Sacramento-San Joaquin River Delta (`Delta') has been subsiding dramatically, losing close to 100 Tg of carbon since the mid 19th century due in large part to agriculture-induced oxidation of the peat soils through drainage and cultivation. Efforts to re-wet the peat soils through wetland restoration are attractive as climate mitigation activities. While flooded wetland systems have the potential to sequester significant amounts of carbon as photosynthesis outpaces aerobic respiration, the highly-reduced conditions can result in significant methane emissions. This study will utilize three years (2014-2016) of continuous, gap-filled, CO2 and CH4 flux data from a mesonetwork of seven eddy covariance towers in the Delta to compute GHG budgets for the restored wetlands and agricultural baseline sites measured. Along with biogeochemical impacts of wetland restoration, biophysical impacts such as changes in reflectance, energy partitioning, and surface roughness, can have significant local to regional impacts on air temperature and heat fluxes. We hypothesize that despite flooded wetlands reducing albedo, wetland land cover will cool the near-surface air temperature due to increased net radiation being preferentially partitioned into latent heat flux and rougher canopy conditions allowing for more turbulent mixing with the atmosphere. This study will investigate the seasonal and diurnal patterns of turbulent energy fluxes and the surface properties that drive them. With nascent policy mechanisms set to compensate landowners and farmers for low emission land use practices beyond reforestation, it is essential that policy mechanisms take into consideration how the biophysical impacts of land use change could drive local to regional-scale climatic perturbations, enhancing or attenuating the biogeochemical impacts.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22720588','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22720588"><span>[Quantifying rice (Oryza sativa L.) photo-assimilated carbon input into soil organic carbon pools following continuous 14C labeling].</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Nie, San-An; Zhou, Ping; Ge, Ti-Da; Tong, Cheng-Li; Xiao, He-Ai; Wu, Jin-Shui; Zhang, Yang-Zhu</p> <p>2012-04-01</p> <p>The microcosm experiment was carried out to quantify the input and distribution of photo-assimilated C into soil C pools by using a 14C continuous labeling technique. Destructive samplings of rice (Oryza sativa) were conducted after labeling for 80 days. The allocation of 14C-labeled photosynthates in plants and soil C pools such as dissolved organic C (DOC) and microbial biomass C (MBC) in rice-planted soil were examined over the 14C labeling span. The amounts of rice shoot and root biomass C was ranged from 1.86 to 5.60 g x pot(-1), 0.46 to 0.78 g x pot(-1) in different tested paddy soils after labeling for 80 days, respectively. The amount of 14C in the soil organic C (14C-SOC) was also dependent on the soils, ranged from 114.3 to 348.2 mg x kg(-1), accounting for 5.09% to 6.62% of the rice biomass 14C, respectively. The amounts of 14C in the dissolved organic C (14C-DOC) and in the microbial biomass C(14C-MBC), as proportions of 14C-SOC, were 2.21%-3.54% and 9.72% -17.2%, respectively. The 14C-DOC, 14C-MBC, and 14C-SOC as proportions of total DOC, MBC, and SOC, respectively, were 6.72% -14.64%, 1.70% -7.67%, and 0.73% -1.99%, respectively. Moreover, the distribution and transformation of root-derived C had a greater influence on the dynamics of DOC and MBC than on the dynamics of SOC. Further studies are required to ascertain the functional significance of soil microorganisms (such as C-sequestering bacteria and photosynthetic bacteria) in the paddy system.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/5775398-vivo-quantitation-rat-liver-ability-eliminate-endotoxin-from-portal-vein-blood','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/5775398-vivo-quantitation-rat-liver-ability-eliminate-endotoxin-from-portal-vein-blood"><span>In vivo quantitation of the rat liver's ability to eliminate endotoxin from portal vein blood</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Yamaguchi, Y.; Yamaguchi, K.; Babb, J.L.</p> <p></p> <p>The in vivo uptake of endotoxin by the liver from portal vein blood was assessed during a single passage through the liver. /sup 51/Cr labeled and unlabeled endotoxin were infused in different amounts into the femoral vein of three groups of lead-sensitized rats: a nonoperated, a sham-operated, and a surgically created reversed Eck fistula (REF) group. Whereas in the former two the infused endotoxin encounters the lung as the first filter organ, the liver performs this function in the latter experimental model. The mortality rates observed in control and sham-operated, lead-sensitized rats were found to correlate closely and reproducibly tomore » the degree of endotoxemia. This assay was then applied to determine the amount of endotoxin eliminated by the liver by establishing, in the REF rat, the amounts of endotoxin that escaped hepatic clearance. The capacity of the liver to eliminate endotoxin from portal vein blood during a single passage increases as the portal vein endotoxin level rises; it approaches a maximum, suggesting that endotoxin's interaction with the Kupffer cells conforms to classical saturation kinetics. A Lineweaver-Burk plot prepared from these data indicates that the maximal in vivo capacity of the liver to remove endotoxin from portal vein blood approximates 1.5 micrograms/gm liver/hr. Data obtained with the use of radiolabeled endotoxin corroborate the information obtained with the bioassay technique. Endotoxin eliminated by the Kupffer cells in these quantities is slowly disintegrated; 4 hr after termination of the endotoxin infusion, less than 4% of the radiolabel is found in the urine and none in the bile. These observations indicate that the Kupffer cell's functional capacity to sequester and detoxify endotoxin is extensive and far exceeds the requirements imposed by physiological and most pathological conditions.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70030374','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70030374"><span>North American prairie wetlands are important nonforested land-based carbon storage sites</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Euliss, N.H.; Gleason, R.A.; Olness, A.; McDougal, R.L.; Murkin, H.R.; Robarts, R.D.; Bourbonniere, R.A.; Warner, B.G.</p> <p>2006-01-01</p> <p>We evaluated the potential of prairie wetlands in North America as carbon sinks. Agricultural conversion has resulted in the average loss of 10.1 Mg ha- 1 of soil organic carbon on over 16 million ha of wetlands in this region. Wetland restoration has potential to sequester 378 Tg of organic carbon over a 10-year period. Wetlands can sequester over twice the organic carbon as no-till cropland on only about 17% of the total land area in the region. We estimate that wetland restoration has potential to offset 2.4% of the annual fossil CO2 emission reported for North America in 1990. ?? 2005 Elsevier B.V. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70033333','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70033333"><span>Sequestering ADM ethanol plant carbon dioxide</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Finley, R.J.; Riddle, D.</p> <p>2008-01-01</p> <p>Archer Daniels Midland Co. (ADM) and the Illinois State Geological Survey (ISGS) are collaborating on a project in confirming that a rock formation can store carbon dioxide from the plant in its pores. The project aimed to sequester the gas underground permanently to minimize release of the greenhouse gas into the atmosphere. It is also designed to store one million tons of carbon dioxide over a three-year period. The project is worth $84.3M, funded by $66.7M from the US Department Energy, supplemented by co-funding from ADM and other corporate and state resources. The project will start drilling of wells to an expected depth over 6500 feet into the Mount Simon Sandstone formation.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2010AGUFM.B41E0355S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2010AGUFM.B41E0355S"><span>Soil charcoal from the plains to tundra in the Colorado Front Range</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Sanford, R. L.; Licata, C.</p> <p>2010-12-01</p> <p>Throughout the forests of the central Rockies, soil charcoal from Holocene wildfires has been produced in response to wildland natural fire regimes. The extent and spatial distribution of soil charcoal production is poorly documented in this region, especially with regard to forests and shrublands at different elevations. Soil charcoal is a super-passive C pool derived from woody biomass that can be sequestered for millennia in forest soils. Recent research indicates that soil charcoal may promote enhanced soil fertility. Additionally, soil charcoal is an often overlooked component of soil C mass and flux. We hypothesize that differences in forest and shrubland fire regimes over the millennia have resulted in different soil charcoal amounts. Geospatial data were used to locate random sample plots in foothills shrublands (Cercocarpus montanus), and four forest types; ponderosa pine (Pinus ponderosa), Douglas-fir (Pseudotsuga menziesii), lodgepole pine (Pinus contorta) and spruce-fir (Picea engelmannii - Abies lasiocarpa). Sample plots were stratified to occur with the mid 200 m elevation band of each vegetation type with east aspect, and 10-30% slope. Soils were sampled widely at 0-10 cm depth and analyzed for total soil C and soil charcoal C via chemical digestion and dry combustion techniques. Overall, soil charcoal is four times more abundant in spruce-fir forests than in foothills shrublands (1.9 +/- 0.92 Mg C/ha versus 0.54 +/- 0.44 Mg C/ha). Soil charcoal is also abundant in lodgepole pine and ponderosa pine soils (1.4 +/- 1.02 Mg C/ha and 1.4 +/- 0.54 Mg C/ha respectively) but is less plentiful in Douglas-fir soils (1.0 +/- 0.67). Spruce-fir forests have the most above ground biomass, slower decomposition rates and a less frequent mean fire return interval than the other four forests, hence it makes sense that high per-fire rates of charcoal production would occur in the spruce-fir zone, given large amounts of surface fuels at the time of fire. In contrast, low amounts of coarse woody debris in ponderosa, lodgepole, and shrub communities would cause less charcoal to form, despite higher fire frequencies. The Douglas-fir soil charcoal seems anomalously low, but it may reflect a combination of low forest floor woody debris and low fire frequency. Foothills shrublands have the least biomass, comparatively rapid decomposition rates and a more frequent mean fire return interval. We propose that high biomass and slow turnover rates in the spruce-fir forests creates conditions for relatively higher net soil charcoal accumulation.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li class="active"><span>15</span></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_15 --> <div id="page_16" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li class="active"><span>16</span></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="301"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015EGUGA..17.4097B','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015EGUGA..17.4097B"><span>Potentials to mitigate climate change using biochar - the Austrian perspective</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Bruckman, Viktor J.; Klinglmüller, Michaela; Liu, Jay; Uzun, Basak B.; Varol, Esin A.</p> <p>2015-04-01</p> <p>Biomass utilization is seen as one of various promising strategies to reduce additional carbon emissions. A recent project on potentials of biochar to mitigate climate change (FOREBIOM) goes even a step further towards bioenergy in combination of CCS or "BECS" and tries to assess the current potentials, from sustainable biomass availability to biochar amendment in soils, including the identification of potential disadvantages and current research needs. The current report represents an outcome of the 1st FOREBIOM Workshop held in Vienna in April, 2013 and tries to characterize the Austrian perspective of biochar for climate change mitigation. The survey shows that for a widespread utilization of biochar in climate change mitigation strategies, still a number of obstacles have to be overcome. There are concerns regarding production and application costs, contamination and health issues for both producers and customers besides a fragmentary knowledge about biochar-soil interactions specifically in terms of long-term behavior, biochar stability and the effects on nutrient cycles. However, there are a number of positive examples showing that biochar indeed has the potential to sequester large amounts of carbon while improving soil properties and subsequently leading to a secondary carbon sink via rising soil productivity. Diversification, cascadic utilization and purpose designed biochar production are key strategies overcoming initial concerns, especially regarding economic aspects. A theoretical scenario calculation showed that relatively small amounts of biomass that is currently utilized for energy can reduce the gap between Austria's current GHG emissions and the Kyoto target by about 30% if biomass residues are pyrolized and biochar subsequently used as soil amendment. However, by using a more conservative approach that is representing the aims of the underlying FOREBIOM project (assuming that 10% of the annual biomass increment from forests is used for biochar production), each year 0.38 megatons CO2e could potentially be mitigated in Austria, which is 0.4% of total or 5% of all GHG emissions caused by agriculture in Austria in 2010. In order to produce this amount of biochar annually, about 27 medium-scale or 220 small-scale pyrolysis plants would be required. The economic analysis revealed that biochar yield, carbon sequestration and feedstock costs have the highest influence on GHG abatement costs. Further reading: Bruckman, V.J. and Klinglmüller, M. (2014): Potentials to Mitigate Climate Change Using Biochar - the Austrian Perspective. In: Bruckman, V.J., Liu, J., Başak, B.B. and Apaydın-Varol, E. (Eds.) Potentials to Mitigate Climate Change Using Biochar. IUFRO Occasional Papers 27.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29321628','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29321628"><span>Realizing Mitigation Efficiency of European Commercial Forests by Climate Smart Forestry.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Yousefpour, Rasoul; Augustynczik, Andrey Lessa Derci; Reyer, Christopher P O; Lasch-Born, Petra; Suckow, Felicitas; Hanewinkel, Marc</p> <p>2018-01-10</p> <p>European temperate and boreal forests sequester up to 12% of Europe's annual carbon emissions. Forest carbon density can be manipulated through management to maximize its climate mitigation potential, and fast-growing tree species may contribute the most to Climate Smart Forestry (CSF) compared to slow-growing hardwoods. This type of CSF takes into account not only forest resource potentials in sequestering carbon, but also the economic impact of regional forest products and discounts both variables over time. We used the process-based forest model 4 C to simulate European commercial forests' growth conditions and coupled it with an optimization algorithm to simulate the implementation of CSF for 18 European countries encompassing 68.3 million ha of forest (42.4% of total EU-28 forest area). We found a European CSF policy that could sequester 7.3-11.1 billion tons of carbon, projected to be worth 103 to 141 billion euros in the 21st century. An efficient CSF policy would allocate carbon sequestration to European countries with a lower wood price, lower labor costs, high harvest costs, or a mixture thereof to increase its economic efficiency. This policy prioritized the allocation of mitigation efforts to northern, eastern and central European countries and favored fast growing conifers Picea abies and Pinus sylvestris to broadleaves Fagus sylvatica and Quercus species.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/903407','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/903407"><span>SEQUESTERING AGENTS FOR ACTIVE CAPS - REMEDIATION OF METALS AND ORGANICS</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Knox, A; Michael Paller, M; Danny D. Reible, D</p> <p>2007-05-10</p> <p>This research evaluated organoclays, zeolites, phosphates, and a biopolymer as sequestering agents for inorganic and organic contaminants. Batch experiments were conducted to identify amendments and mixtures of amendments for metal and organic contaminants removal and retention. Contaminant removal was evaluated by calculating partitioning coefficients. Metal retention was evaluated by desorption studies in which residue from the removal studies was extracted with 1 M MgCl{sub 2} solution. The results indicated that phosphate amendments, some organoclays, and the biopolymer, chitosan, were very effective sequestering agents for metals in fresh and salt water. Organoclays were very effective sorbents for phenanthrene, pyrene, and benzo(a)pyrene.more » Partitioning coefficients for the organoclays were 3000-3500 ml g{sup -1} for benzo(a)pyrene, 400-450 ml g{sup -1} for pyrene, and 50-70 ml g{sup -1} for phenanthrene. Remediation of sites with a mixture of contaminants is more difficult than sites with a single contaminant because metals and organic contaminants have different fate and transport mechanisms in sediment and water. Mixtures of amendments (e.g., organoclay and rock phosphate) have high potential for remediating both organic and inorganic contaminants under a broad range of environmental conditions, and have promise as components in active caps for sediment remediation.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=42808','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=42808"><span>The chemistry of poisons in amphibian skin.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Daly, J W</p> <p>1995-01-01</p> <p>Poisons are common in nature, where they often serve the organism in chemical defense. Such poisons either are produced de novo or are sequestered from dietary sources or symbiotic organisms. Among vertebrates, amphibians are notable for the wide range of noxious agents that are contained in granular skin glands. These compounds include amines, peptides, proteins, steroids, and both water-soluble and lipid-soluble alkaloids. With the exception of the alkaloids, most seem to be produced de novo by the amphibian. The skin of amphibians contains many structural classes of alkaloids previously unknown in nature. These include the batrachotoxins, which have recently been discovered to also occur in skin and feathers of a bird, the histrionicotoxins, the gephyrotoxins, the decahydroquinolines, the pumiliotoxins and homopumiliotoxins, epibatidine, and the samandarines. Some amphibian skin alkaloids are clearly sequestered from the diet, which consists mainly of small arthropods. These include pyrrolizidine and indolizidine alkaloids from ants, tricyclic coccinellines from beetles, and pyrrolizidine oximes, presumably from millipedes. The sources of other alkaloids in amphibian skin, including the batrachotoxins, the decahydroquinolines, the histrionicotoxins, the pumiliotoxins, and epibatidine, are unknown. While it is possible that these are produced de novo or by symbiotic microorganisms, it appears more likely that they are sequestered by the amphibians from as yet unknown dietary sources. PMID:7816854</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4262175','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4262175"><span>Active foraging for toxic prey during gestation in a snake with maternal provisioning of sequestered chemical defences</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Kojima, Yosuke; Mori, Akira</p> <p>2015-01-01</p> <p>Many animals sequester dietary defensive compounds and incorporate them into the offspring, which protects the young against predation. One possible but poorly investigated question is whether females of such species actively prey upon toxic diets. The snake Rhabdophis tigrinus sequesters defensive steroids from toads consumed as prey; it also feeds on other amphibians. Females produce chemically armed offspring in direct proportion to their own level of toad-derived toxins by provisioning the toxins to their eggs. Our field observations of movements and stomach contents of radio-tracked R. tigrinus showed that gravid snakes preyed upon toads by actively foraging in the habitat of toads, even though toads were a scarce resource and toad-searching may incur potential costs. Our Y-maze experiments demonstrated that gravid females were more likely to trail the chemical cues of toads than were males or non-gravid females. These results showed behavioural switching in females and active foraging for scarce, toxic prey during gestation. Because exploitation of toads by gravid females results in their offspring being more richly endowed with prey-derived toxins, active foraging for toxic prey is expected to be an adaptive antipredator trait, which may enhance chemical defence in offspring. PMID:25392472</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25392472','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25392472"><span>Active foraging for toxic prey during gestation in a snake with maternal provisioning of sequestered chemical defences.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Kojima, Yosuke; Mori, Akira</p> <p>2015-01-07</p> <p>Many animals sequester dietary defensive compounds and incorporate them into the offspring, which protects the young against predation. One possible but poorly investigated question is whether females of such species actively prey upon toxic diets. The snake Rhabdophis tigrinus sequesters defensive steroids from toads consumed as prey; it also feeds on other amphibians. Females produce chemically armed offspring in direct proportion to their own level of toad-derived toxins by provisioning the toxins to their eggs. Our field observations of movements and stomach contents of radio-tracked R. tigrinus showed that gravid snakes preyed upon toads by actively foraging in the habitat of toads, even though toads were a scarce resource and toad-searching may incur potential costs. Our Y-maze experiments demonstrated that gravid females were more likely to trail the chemical cues of toads than were males or non-gravid females. These results showed behavioural switching in females and active foraging for scarce, toxic prey during gestation. Because exploitation of toads by gravid females results in their offspring being more richly endowed with prey-derived toxins, active foraging for toxic prey is expected to be an adaptive antipredator trait, which may enhance chemical defence in offspring. © 2014 The Author(s) Published by the Royal Society. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/7835348','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/7835348"><span>Effects of secondary structure on pre-mRNA splicing: hairpins sequestering the 5' but not the 3' splice site inhibit intron processing in Nicotiana plumbaginifolia.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Liu, H X; Goodall, G J; Kole, R; Filipowicz, W</p> <p>1995-01-16</p> <p>We have performed a systematic study of the effect of artificial hairpins on pre-mRNA splicing in protoplasts of a dicot plant, Nicotiana plumbaginifolia. Hairpins with a potential to form 18 or 24 bp stems strongly inhibit splicing when they sequester the 5' splice site or are placed in the middle of short introns. However, similar 24 bp hairpins sequestering the 3' splice site do not prevent this site from being used as an acceptor. Utilization of the stem-located 3' site requires that the base of the stem is separated from the upstream 5' splice site by a minimum of approximately 45 nucleotides and that another 'helper' 3' splice site is present downstream of the stem. The results indicate that the spliceosome or factors associated with it may have a potential to unfold secondary structure present in the downstream portion of the intron, prior to or at the step of the 3' splice site selection. The finding that the helper 3' site is required for utilization of the stem-located acceptor confirms and extends previous observations, obtained with HeLa cell in vitro splicing systems, indicating that the 3' splice site may be recognized at least twice during spliceosome assembly.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5344537','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5344537"><span>Release of HIV-1 sequestered in the vesicles of oral and genital mucosal epithelial cells by epithelial-lymphocyte interaction</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Yasen, Aizezi; Herrera, Rossana; Rosbe, Kristina</p> <p>2017-01-01</p> <p>Oropharyngeal mucosal epithelia of fetuses/neonates/infants and the genital epithelia of adults play a critical role in HIV-1 mother-to-child transmission and sexual transmission of virus, respectively. To study the mechanisms of HIV-1 transmission through mucosal epithelium, we established polarized tonsil, cervical and foreskin epithelial cells. Analysis of HIV-1 transmission through epithelial cells showed that approximately 0.05% of initially inoculated virions transmigrated via epithelium. More than 90% of internalized virions were sequestered in the endosomes of epithelial cells, including multivesicular bodies (MVBs) and vacuoles. Intraepithelial HIV-1 remained infectious for 9 days without viral release. Release of sequestered intraepithelial HIV-1 was induced by the calcium ionophore ionomycin and by cytochalasin D, which increase intracellular calcium and disrupt the cortical actin of epithelial cells, respectively. Cocultivation of epithelial cells containing HIV-1 with activated peripheral blood mononuclear cells and CD4+ T lymphocytes led to the disruption of epithelial cortical actin and spread of virus from epithelial cells to lymphocytes. Treatment of epithelial cells with proinflammatory cytokines tumor necrosis factor-alpha and interferon gamma also induced reorganization of cortical actin and release of virus. Inhibition of MVB formation by small interfering RNA (siRNA)-mediated silencing of its critical protein hepatocyte growth factor-regulated tyrosine kinase substrate (Hrs) expression reduced viral sequestration in epithelial cells and its transmission from epithelial cells to lymphocytes by ~60–70%. Furthermore, inhibition of vacuole formation of epithelial cells by siRNA-inactivated rabankyrin-5 expression also significantly reduced HIV-1 sequestration in epithelial cells and spread of virus from epithelial cells to lymphocytes. Interaction of the intercellular adhesion molecule-1 of epithelial cells with the function-associated antigen-1 of lymphocytes was important for inducing the release of sequestered HIV-1 from epithelial cells and facilitating cell-to-cell spread of virus from epithelial cells to lymphocytes. This mechanism may serve as a pathway of HIV-1 mucosal transmission. PMID:28241053</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/231975-phytoremediation-using-green-plants-clean-up-contaminated-soil-groundwater-wastewater','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/231975-phytoremediation-using-green-plants-clean-up-contaminated-soil-groundwater-wastewater"><span>Phytoremediation: Using green plants to clean up contaminated soil, groundwater, and wastewater</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Negri, M.C.; Hinchman, R.R.</p> <p>1996-05-01</p> <p>Phytoremediation, an emerging cleanup technology for contaminated soils, groundwater, and wastewater that is both low-tech and low-cost, is defined as the engineered use of green plants (including grasses, forbs, and woody species) to remove, contain, or render harmless such environmental contaminants as heavy metals, trace elements, organic compounds ({open_quotes}organics{close_quotes}), and radioactive compounds in soil or water. Current research at Argonne National Laboratory includes a successful field demonstration of a plant bioreactor for processing the salty wastewater from petroleum wells; the demonstration is currently under way at a natural gas well site in Oklahoma, in cooperation with Devon Energy Corporation. Amore » greenhouse experiment on zinc uptake in hybrid poplar (Populus sp.) was initiated in 1995. These experiments are being conducted to confirm and extend field data from Applied Natural Sciences, Inc. (our CRADA partner), indicating high levels of zinc (4,200 ppm) in leaves of hybrid poplar growing as a cleanup system at a site with zinc contamination in the root zone of some of the trees. Analyses of soil water from experimental pots that had received several doses of zinc indicated that the zinc was totally sequestered by the plants in about 4 hours during a single pass through the root system. The data also showed concentrations of sequestered metal of >38,000 ppm Zn in the dry root tissue. These levels of sequestered zinc exceed the levels found in either roots or tops of many of the known {open_quotes}hyperaccumulator{close_quotes} species. Because the roots sequester most of the contaminant taken up in most plants, a major objective of this program is to determine the feasibility of root harvesting as a method to maximize the removal of contaminants from soils. Available techniques and equipment for harvesting plant roots, including young tree roots, are being evaluated and modified as necessary for use with phytoremediation plants.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017Sci...356..948A','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017Sci...356..948A"><span>Massive blow-out craters formed by hydrate-controlled methane expulsion from the Arctic seafloor</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Andreassen, K.; Hubbard, A.; Winsborrow, M.; Patton, H.; Vadakkepuliyambatta, S.; Plaza-Faverola, A.; Gudlaugsson, E.; Serov, P.; Deryabin, A.; Mattingsdal, R.; Mienert, J.; Bünz, S.</p> <p>2017-06-01</p> <p>Widespread methane release from thawing Arctic gas hydrates is a major concern, yet the processes, sources, and fluxes involved remain unconstrained. We present geophysical data documenting a cluster of kilometer-wide craters and mounds from the Barents Sea floor associated with large-scale methane expulsion. Combined with ice sheet/gas hydrate modeling, our results indicate that during glaciation, natural gas migrated from underlying hydrocarbon reservoirs and was sequestered extensively as subglacial gas hydrates. Upon ice sheet retreat, methane from this hydrate reservoir concentrated in massive mounds before being abruptly released to form craters. We propose that these processes were likely widespread across past glaciated petroleum provinces and that they also provide an analog for the potential future destabilization of subglacial gas hydrate reservoirs beneath contemporary ice sheets.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2007NatNa...2..679L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2007NatNa...2..679L"><span>Injectable nanocarriers for biodetoxification</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Leroux, Jean-Christophe</p> <p>2007-11-01</p> <p>Hospitals routinely treat patients suffering from overdoses of drugs or other toxic chemicals as a result of illicit drug consumption, suicide attempts or accidental exposures. However, for many life-threatening situations, specific antidotes are not available and treatment is largely based on emptying the stomach, administering activated charcoal or other general measures of intoxication support. A promising strategy for managing such overdoses is to inject nanocarriers that can extract toxic agents from intoxicated tissues. To be effective, the nanocarriers must remain in the blood long enough to sequester the toxic components and/or their metabolites, and the toxin bound complex must also remain stable until it is removed from the bloodstream. Here, we discuss the principles that govern the use of injectable nanocarriers in biodetoxification and review the pharmacological performance of a number of different approaches.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2812437','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2812437"><span>Mechanism of the eukaryotic chaperonin: protein folding in the chamber of secrets</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Spiess, Christoph; Meyer, Anne S.; Reissmann, Stefanie; Frydman, Judith</p> <p>2010-01-01</p> <p>Chaperonins are key components of the cellular chaperone machinery. These large, cylindrical complexes contain a central cavity that binds to unfolded polypeptides and sequesters them from the cellular environment. Substrate folding then occurs in this central cavity in an ATP-dependent manner. The eukaryotic chaperonin TCP-1 ring complex (TRiC, also called CCT) is indispensable for cell survival because the folding of an essential subset of cytosolic proteins requires TRiC, and this function cannot be substituted by other chaperones. This specificity indicates that TRiC has evolved structural and mechanistic features that distinguish it from other chaperones. Although knowledge of this unique complex is in its infancy, we review recent advances that open the way to understanding the secrets of its folding chamber. PMID:15519848</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25895889','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25895889"><span>Crescendo: A Protein Sequence Database Search Engine for Tandem Mass Spectra.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Wang, Jianqi; Zhang, Yajie; Yu, Yonghao</p> <p>2015-07-01</p> <p>A search engine that discovers more peptides reliably is essential to the progress of the computational proteomics. We propose two new scoring functions (L- and P-scores), which aim to capture similar characteristics of a peptide-spectrum match (PSM) as Sequest and Comet do. Crescendo, introduced here, is a software program that implements these two scores for peptide identification. We applied Crescendo to test datasets and compared its performance with widely used search engines, including Mascot, Sequest, and Comet. The results indicate that Crescendo identifies a similar or larger number of peptides at various predefined false discovery rates (FDR). Importantly, it also provides a better separation between the true and decoy PSMs, warranting the future development of a companion post-processing filtering algorithm.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/pages/biblio/1342736-visualizing-chain-flipping-mechanism-fatty-acid-biosynthesis','SCIGOV-DOEP'); return false;" href="https://www.osti.gov/pages/biblio/1342736-visualizing-chain-flipping-mechanism-fatty-acid-biosynthesis"><span>Visualizing the chain-flipping mechanism in fatty-acid biosynthesis</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/pages">DOE PAGES</a></p> <p>Beld, Joris; Cang, Hu; Burkart, Michael D.</p> <p>2014-10-29</p> <p>The acyl carrier protein (ACP) from fatty acid synthases sequesters elongating products within its hydrophobic core, but this dynamic mechanism remains poorly understood. In this paper, we exploited solvatochromic pantetheine probes attached to ACP that fluoresce when sequestered. The addition of a catalytic partner lures the cargo out of the ACP and into the active site of the enzyme, thus enhancing fluorescence to reveal the elusive chain-flipping mechanism. This activity was confirmed by the use of a dual solvatochromic cross-linking probe and solution-phase NMR spectroscopy. Finally, the chain-flipping mechanism was visualized by single-molecule fluorescence techniques, thus demonstrating specificity between themore » Escherichia coli ACP and its ketoacyl synthase catalytic partner KASII.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22942379','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22942379"><span>Ribulose-1,5-bis-phosphate carboxylase/oxygenase accumulation factor1 is required for holoenzyme assembly in maize.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Feiz, Leila; Williams-Carrier, Rosalind; Wostrikoff, Katia; Belcher, Susan; Barkan, Alice; Stern, David B</p> <p>2012-08-01</p> <p>Most life is ultimately sustained by photosynthesis and its rate-limiting carbon fixing enzyme, ribulose-1,5-bis-phosphate carboxylase/oxygenase (Rubisco). Although the structurally comparable cyanobacterial Rubisco is amenable to in vitro assembly, the higher plant enzyme has been refractory to such manipulation due to poor understanding of its assembly pathway. Here, we report the identification of a chloroplast protein required for Rubisco accumulation in maize (Zea mays), RUBISCO ACCUMULATION FACTOR1 (RAF1), which lacks any characterized functional domains. Maize lines lacking RAF1 due to Mutator transposon insertions are Rubisco deficient and seedling lethal. Analysis of transcripts and proteins showed that Rubisco large subunit synthesis in raf1 plants is not compromised; however, newly synthesized Rubisco large subunit appears in a high molecular weight form whose accumulation requires a specific chaperonin 60 isoform. Gel filtration analysis and blue native gels showed that endogenous and recombinant RAF1 are trimeric; however, following in vivo cross-linking, RAF1 copurifies with Rubisco large subunit, suggesting that they interact weakly or transiently. RAF1 is predominantly expressed in bundle sheath chloroplasts, consistent with a Rubisco accumulation function. Our results support the hypothesis that RAF1 acts during Rubisco assembly by releasing and/or sequestering the large subunit from chaperonins early in the assembly process.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70020068','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70020068"><span>Rare earth element metasomatism in hydrothermal systems: The Willsboro-Lewis wollastonite ores, New York, USA</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Whitney, P.R.; Olmsted, J.F.</p> <p>1998-01-01</p> <p>Wollastonite ores and garnet-pyroxene skarns in the Willsboro-Lewis district, New York, USA were formed in a complex hydrothermal system associated with the emplacement of a large anorthosite pluton. Contact-metamorphic marbles were replaced by wollastonite, garnet, and clinopyroxene during infiltration metasomatism involving large volumes of water of chiefly meteoric origin. Rare earth elements (REE) in these rocks show large departures from the protolith REE distribution, indicative of substantial REE mobility. Three types of chondrite-normalized REE distribution patterns are present. The most common, found in ores and skarns containing andradite-rich garnet, is convex-up in the light REE (LREE) with a maximum at Pr and a positive Eu anomaly. Europium anomalies and Pr/Yb ratios are correlated with X(Ad) in garnet. This pattern (type C) results from uptake of REE from hydrothermal fluids by growing crystals of calcsilicate minerals, principally andradite, with amounts of LREE controlled by the difference in ionic radius between Ca++ and REE3+ in garnet X sites. The Eu anomaly results either from prior interaction of the fluids with plagioclase-rich, Eu-positive anorthositic rocks in and near the ore zone, or by enrichment of divalent Eu on growth surfaces of garnet followed by entrapment, or both. Relative enrichment in heavy REE (type H) occurs in ores and skarn where calcsilicates, including grossularitic garnet, in contact-metamorphic marble have been concentrated by dissolution of calcite. In most cases a negative Eu anomaly is inherited from the marble protolith. Skarns containing titanite and apatite exhibit high total REE, relative light REE enrichment, and negative Eu anomalies (type L). These appear to be intrusive igneous rocks (ferrodiorites or anorthositic gabbros) that have been converted to skarn by Ca metasomatism. REE, sequestered in titanite, apatite, and garnet, preserve the approximate REE distribution pattern of the igneous protolith. Post-ore granulite facies metamorphism homogenized zoned mineral grains without causing complete intergranular reequilibration and does not appear to have significantly affected the whole-rock REE distributions. These results demonstrate that extensive REE metasomatism can occur in hydrothermal systems at shallow to intermediate depths and that REE geochemistry may be useful in discerning the origin of skarns and skarn-related ore deposits.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017E%26PSL.480...25G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017E%26PSL.480...25G"><span>The terrestrial late veneer from core disruption of a lunar-sized impactor</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Genda, H.; Brasser, R.; Mojzsis, S. J.</p> <p>2017-12-01</p> <p>Overabundances in highly siderophile elements (HSEs) of Earth's mantle can be explained by conveyance from a singular, immense (D ∼ 3000 km) ;Late Veneer; impactor of chondritic composition, subsequent to lunar formation and terrestrial core-closure. Such rocky objects of approximately lunar mass (∼0.01 M⊕) ought to be differentiated, such that nearly all of their HSE payload is sequestered into iron cores. Here, we analyze the mechanical and chemical fate of the core of such a Late Veneer impactor, and trace how its HSEs are suspended - and thus pollute - the mantle. For the statistically most-likely oblique collision (∼45°), the impactor's core elongates and thereafter disintegrates into a metallic hail of small particles (∼10 m). Some strike the orbiting Moon as sesquinary impactors, but most re-accrete to Earth as secondaries with further fragmentation. We show that a single oblique impactor provides an adequate amount of HSEs to the primordial terrestrial silicate reservoirs via oxidation of (<m-sized) metal particles with a hydrous, pre-impact, early Hadean Earth.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/835220','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/835220"><span>DOE-FG02-00ER62797 Final Report</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Sweedler, J.V.</p> <p>2004-12-01</p> <p>Specific Aims The overall goal of this proposal has been to develop and interface a new technology, molecular gates, with microfabricated systems to add an important capability to microfabricated DNA measurement systems. This project specifically focused on demonstrating how molecular gates could be used to capture a single analyte band, among a stream of bands from a separation or a flow injection analysis experiment, and release it for later measurement, thus allowing further manipulations on the selected analyte. Since the original proposal, the molecular gate concept has been greatly expanded to allow the gates to be used as externally controllablemore » intelligent interconnects in multilayer microfluidic networks. We have demonstrated: (1) the ability of the molecular gates to work with a much wider range of biological molecules including DNA, proteins and small metabolites; and (2) the capability of performing an electrophoretic separation and sequestering individual picoliter volume components (or even classes of components) into separate channels for further analysis. Both capabilities will enable characterization of small mass amounts of complex mixtures of DNA, proteins and even small molecules--allowing them to be further separated and chemically characterized.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3948733','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3948733"><span>Carbon Sequestration and Fertility after Centennial Time Scale Incorporation of Charcoal into Soil</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Criscuoli, Irene; Alberti, Giorgio; Baronti, Silvia; Favilli, Filippo; Martinez, Cristina; Calzolari, Costanza; Pusceddu, Emanuela; Rumpel, Cornelia; Viola, Roberto; Miglietta, Franco</p> <p>2014-01-01</p> <p>The addition of pyrogenic carbon (C) in the soil is considered a potential strategy to achieve direct C sequestration and potential reduction of non-CO2 greenhouse gas emissions. In this paper, we investigated the long term effects of charcoal addition on C sequestration and soil physico-chemical properties by studying a series of abandoned charcoal hearths in the Eastern Alps of Italy established in the XIX century. This natural setting can be seen as an analogue of a deliberate experiment with replications. Carbon sequestration was assessed indirectly by comparing the amount of pyrogenic C present in the hearths (23.3±4.7 kg C m−2) with the estimated amount of charcoal that was left on the soil after the carbonization (29.3±5.1 kg C m−2). After taking into account uncertainty associated with parameters’ estimation, we were able to conclude that 80±21% of the C originally added to the soil via charcoal can still be found there and that charcoal has an overall Mean Residence Time of 650±139 years, thus supporting the view that charcoal incorporation is an effective way to sequester atmospheric CO2. We also observed an overall change in the physical properties (hydrophobicity and bulk density) of charcoal hearth soils and an accumulation of nutrients compared to the adjacent soil without charcoal. We caution, however, that our site-specific results should not be generalized without further study. PMID:24614647</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29708644','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29708644"><span>Influence of the Hfq and Crc global regulators on the control of iron homeostasis in Pseudomonas putida.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Sánchez-Hevia, Dione L; Yuste, Luis; Moreno, Renata; Rojo, Fernando</p> <p>2018-04-30</p> <p>Metabolically versatile bacteria use catabolite repression control to select their preferred carbon sources, thus optimizing carbon metabolism. In pseudomonads, this occurs through the combined action of the proteins Hfq and Crc, which form stable tripartite complexes at target mRNAs, inhibiting their translation. The activity of Hfq/Crc is antagonised by small RNAs of the CrcZ family, the amounts of which vary according to carbon availability. The present work examines the role of Pseudomonas putida Hfq protein under conditions of low-level catabolite repression, in which Crc protein would have a minor role since it is sequestered by CrcZ/CrcY. The results suggest that, under these conditions, Hfq remains operative and plays an important role in iron homeostasis. In this scenario, Crc appears to participate indirectly by helping CrcZ/CrcY to control the amount of free Hfq in the cell. Iron homeostasis in pseudomonads relies on regulatory elements such as the Fur protein, the PrrF1-F2 sRNAs, and several extracytoplasmic sigma factors. Our results show that the absence of Hfq is paralleled by a reduction in PrrF1-F2 small RNAs. Hfq thus provides a regulatory link between iron and carbon metabolism, coordinating the iron supply to meet the needs of the enzymes operational under particular nutritional regimes. This article is protected by copyright. All rights reserved. © 2018 Society for Applied Microbiology and John Wiley & Sons Ltd.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li class="active"><span>16</span></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_16 --> <div id="page_17" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li class="active"><span>17</span></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="321"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://hdl.handle.net/2060/19890004784','NASA-TRS'); return false;" href="http://hdl.handle.net/2060/19890004784"><span>Gaseous emissions from plants in controlled environments</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://ntrs.nasa.gov/search.jsp">NASA Technical Reports Server (NTRS)</a></p> <p>Dubay, Denis T.</p> <p>1988-01-01</p> <p>Plant growth in a controlled ecological life support system may entail the build-up over extended time periods of phytotoxic concentrations of volatile organic compounds produced by the plants themselves. Ethylene is a prominent gaseous emission of plants, and is the focus of this report. The objective was to determine the rate of ethylene release by spring wheat, white potato, and lettuce during early, middle, and late growth stages, and during both the light and dark segments of the diurnal cycle. Plants grown hydroponically using the nutrient film technique were covered with plexiglass containers for 4 to 6 h. At intervals after enclosure, gas samples were withdrawn with a syringe and analyzed for ethylene with a gas chromatograph. Lettuce produced 10 to 100 times more ethylene than wheat or potato, with production rates ranging from 141 to 158 ng g-dry/wt/h. Wheat produced from 1.7 to 14.3 ng g-dry/wt/h, with senescent wheat producing the least amount and flowering wheat the most. Potatoes produced the least amount of ethylene, with values never exceeding 5 ng g-dry/wt/h. Lettuce and potatoes each produced ethylene at similar rates whether in dark period or light period. Ethylene sequestering of 33 to 43 percent by the plexiglass enclosures indicated that these production estimates may be low by one-third to one-half. These results suggest that concern for ethylene build-up in a contained atmosphere should be greatest when growing lettuce, and less when growing wheat or potato.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/1036090','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/1036090"><span>Well-to-wheels analysis of fast pyrolysis pathways with the GREET model.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Han, J.; Elgowainy, A.; Palou-Rivera, I.</p> <p></p> <p>The pyrolysis of biomass can help produce liquid transportation fuels with properties similar to those of petroleum gasoline and diesel fuel. Argonne National Laboratory conducted a life-cycle (i.e., well-to-wheels [WTW]) analysis of various pyrolysis pathways by expanding and employing the Greenhouse Gases, Regulated Emissions, and Energy Use in Transportation (GREET) model. The WTW energy use and greenhouse gas (GHG) emissions from the pyrolysis pathways were compared with those from the baseline petroleum gasoline and diesel pathways. Various pyrolysis pathway scenarios with a wide variety of possible hydrogen sources, liquid fuel yields, and co-product application and treatment methods were considered. Atmore » one extreme, when hydrogen is produced from natural gas and when bio-char is used for process energy needs, the pyrolysis-based liquid fuel yield is high (32% of the dry mass of biomass input). The reductions in WTW fossil energy use and GHG emissions relative to those that occur when baseline petroleum fuels are used, however, is modest, at 50% and 51%, respectively, on a per unit of fuel energy basis. At the other extreme, when hydrogen is produced internally via reforming of pyrolysis oil and when bio-char is sequestered in soil applications, the pyrolysis-based liquid fuel yield is low (15% of the dry mass of biomass input), but the reductions in WTW fossil energy use and GHG emissions are large, at 79% and 96%, respectively, relative to those that occur when baseline petroleum fuels are used. The petroleum energy use in all scenarios was restricted to biomass collection and transportation activities, which resulted in a reduction in WTW petroleum energy use of 92-95% relative to that found when baseline petroleum fuels are used. Internal hydrogen production (i.e., via reforming of pyrolysis oil) significantly reduces fossil fuel use and GHG emissions because the hydrogen from fuel gas or pyrolysis oil (renewable sources) displaces that from fossil fuel natural gas and the amount of fossil natural gas used for hydrogen production is reduced; however, internal hydrogen production also reduces the potential petroleum energy savings (per unit of biomass input basis) because the fuel yield declines dramatically. Typically, a process that has a greater liquid fuel yield results in larger petroleum savings per unit of biomass input but a smaller reduction in life-cycle GHG emissions. Sequestration of the large amount of bio-char co-product (e.g., in soil applications) provides a significant carbon dioxide credit, while electricity generation from bio-char combustion provides a large energy credit. The WTW energy and GHG emissions benefits observed when a pyrolysis oil refinery was integrated with a pyrolysis reactor were small when compared with those that occur when pyrolysis oil is distributed to a distant refinery, since the activities associated with transporting the oil between the pyrolysis reactors and refineries have a smaller energy and emissions footprint than do other activities in the pyrolysis pathway.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2007AGUFM.U42A..06A','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2007AGUFM.U42A..06A"><span>Terrestrial Carbon Sequestration with Biochar: A Preliminary Assessment of its Global Potential</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Amonette, J.; Lehmann, J.; Joseph, S.</p> <p>2007-12-01</p> <p>Biochar technology involves the capture of CO2 from the atmosphere by photosynthesis and its ultimate conversion to biochar by pyrolysis. Energy is obtained during the pyrolysis process and the charcoal, or biochar, which is considerably more stable than biomass, may then be incorporated into agricultural lands where it serves to increase the nutrient- and water-holding capacity of soil. With an estimated half-life in soil on the order of centuries to millenia, biochar offers a way of safely storing C for long periods of time while enhancing the productivity of terrestrial ecosystems. Moreover, biochar technology, like other biomass conversion approaches that include C sequestration options, offers a way to decrease the levels of CO2 in the atmosphere. That is, biochar technology is one of the few inherently "carbon-negative" sources of energy. These positive attributes are of little consequence, however, if the total contribution to sequestration is small compared to the need. In this paper, we provide a preliminary assessment of the potential contribution of biochar technology to the mitigation of climate change, and identify some research needs. Currently, the atmospheric C levels are increasing by about 4.1 Gt/yr, with 7.2 Gt/yr being put into the atmosphere by fossil fuel combustion and cement production, and 3.1 Gt/yr being removed from the atmosphere by the ocean (2.2 Gt/yr) and terrestrial processes (0.9 Gt/yr). The uptake by terrestrial processes can be increased significantly by management of the 60.6 Gt/yr of biomass C that is fixed by photosynthesis (i.e., net primary productivity), of which 59 Gt/yr is decomposed and 1.6 Gt/yr combusted. Biomass pyrolysis converts about 50% of the biomass C to char. Of the other 50% that is converted to bio-oil and bio-gas, the net energy production is about 62% efficient. Thus, pyrolysis of 1 Gt of biomass C would provide energy equivalent to about 0.3 Gt of fossil C and could be used to offset that amount of fossil C, while sequestering 0.5 Gt as biochar. Of the 60.6 Gt/yr of biomass that is fixed in usable form, we estimate that perhaps 10% of it (6.1 Gt/yr) could become available in one form or another (crop and forestry residues, and animal waste) for pyrolysis. This level of pyrolysis would offset 1.8 Gt/yr of fossil C, and sequester 3.0 Gt/yr as biochar, enough to halt the increase and actually decrease the level of atmospheric C by 0.7 Gt/yr. Even at half this level (i.e., 5% of annually fixed biomass), pyrolysis would be sufficient to decrease the global C cycle imbalance by 2.4 Gt/yr and in combination with other sequestration options help to achieve the minimum goal of C neutrality. Clearly, the potential contribution of biochar technology is large, perhaps large enough to mitigate climate change alone. However, this preliminary assessment is tempered by several unknowns. Research is needed to further define the impacts of biochar amendments on soil biota, productivity, and greenhouse gas production. For example, there is some evidence that N2O and CH4 production is decreased by biochar amendments, but the mechanisms responsible are unknown. The impact of different types of biochar and pyrolysis conditions also needs to be determined. Lastly, total accounting for greenhouse gas emissions coupled with economic analyses to determine the economic potential of the technology under various scenarios is essential.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012AGUFM.B13C0536L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012AGUFM.B13C0536L"><span>Interactive effects of agricultural management and topography on soil carbon sequestration</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Ladoni, M.; Kravchenko, S.; Munoz, J.; Erickson, M.</p> <p>2012-12-01</p> <p>Proper agricultural management scenarios such as no-tillage, cover cropping, agroforestry, have demonstrated potential to increase the amount of carbon sequestered in soil and to mitigate atmospheric carbon levels. The knowledge about positive effects of cover cropping comes mostly from small uniform experimental plots, but whether these positive effects will exists in large scale fields with diverse topography and what would be the magnitude of these effects on a field scale remains to be seen. Our objective is to compare performance of different agricultural managements including those with cover crops in their influences on SOC across diverse topographical landscape in large agricultural fields. The three studied agricultural practices are Conventionally tilled and fertilized management without cover crops (T1), Low-input management with reduced chemical inputs (T3) and Organic (T4) management, the latter two have rye and red clover cover crops as part of their rotations. Within each field 1- 4 transects with three topographical positions of "depression", "slope" and "summit" were identified. The first soil sampling was done in spring 2010 and the second set of soil samples were collected from topographical positions during growing season of 2011. Samples were analyzed for total SOC and also particulate organic carbon (POC) content to show the changes in active pools of SOC. The results showed that topography has a significant influence in performance of cover crops. Agricultural managements with cover crops increased the POC in soil and the magnitude of this increase was different across space. Cover crops built the highest POC in depressions followed by summit and then slope. The conventional agricultural management increased POC in depression but decreased it on slopes. Low-input agricultural management when coupled with cover cropping has a potential to produce the highest increase in active pools of SOC across topographically diverse fields. The ratio of particulate organic carbon (POC) to total organic carbon (TOC) in each of agricultural managements (T1: conventional, T3: low-input, T4: organic), topographical position (DE: depression, SL: slope, SU: summit) and depth of soil (cm).</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014AGUFMOS11C..05M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014AGUFMOS11C..05M"><span>Short- and Long-Term Dynamics of Gas Hydrate at GC600: A Gulf of Mexico Hydrocarbon Seep</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>MacDonald, I. R.; Johansen, C.; Silva, M.; Daneshgar, S.; Garcia-Pineda, O. G.; Shedd, W. W.</p> <p>2014-12-01</p> <p>The GC600 hydrocarbon seep is located at 1200 m in the northern Gulf of Mexico (GOM). Satellite data show it to be one of the most prolific sources of natural oil slicks in the entire GOM. We mapped its seafloor oil and gas vents with 3-D seismic, swath-bathymetry acoustics and submersible observations, documenting gas hydrate deposits, brine pools, benthic fauna, and authigenic carbonates. Geophysical profiles show subbottom locations of salt bodies and migration conduits. We deployed time-lapse imaging systems focused on individual vents to quantify release rates. Oil and gas flow upward along the flanks of an allochthonous salt body from source rocks at 10,000 m and migrate to the seafloor from faults emanating from the salt. Venting to the water column and surface consists of oily bubbles and occurs in two fields separated by ~1 km. The NW vent field (Megaplume) appears to be a more recent expression and hosts about three highly active vents; while the SE vent field (Birthday Candles) hosts more than 10 vents that are generally slower. We measured discharge rates of 2.6 cm3 s-1 and Megaplume and 0.09 cm3 s-1 at Birthday Candles. Although surface deposits of gas hydrate were evident at both vent fields, the Birthday Candles area featured dozens of conical mounds formed by gas hydrate that were dark brown due to large amounts of liquid oil perfused throughout the deposits. Large brine pools indicated gas hydrate formation at the seafloor. Venting occurred in horizontal fissures on the mounds, in which oil and hydrate combined to form short-lived chimneys and balloon-like structures. Ice worms (Hesiocaeca methanicola) were extremely abundant in burrows extending from the sediment into the gas hydrate. Proceeding farther to the SE, venting is reduced and absent, but surface carbonate deposits suggest relict gas hydrate mounds. We propose that the NW to SE trend at GC600 encompasses the progressive development of a biogeochemical filter that sequesters and mineralizes a very substantial portion of the source hydrocarbon prior to discharge into the water column.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27992951','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27992951"><span>Limits on carbon sequestration in arid blue carbon ecosystems.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Schile, Lisa M; Kauffman, J Boone; Crooks, Stephen; Fourqurean, James W; Glavan, Jane; Megonigal, J Patrick</p> <p>2017-04-01</p> <p>Coastal ecosystems produce and sequester significant amounts of carbon ("blue carbon"), which has been well documented in humid and semi-humid regions of temperate and tropical climates but less so in arid regions where mangroves, marshes, and seagrasses exist near the limit of their tolerance for extreme temperature and salinity. To better understand these unique systems, we measured whole-ecosystem carbon stocks in 58 sites across the United Arab Emirates (UAE) in natural and planted mangroves, salt marshes, seagrass beds, microbial mats, and coastal sabkha (inter- and supratidal unvegetated salt flats). Natural mangroves held significantly more carbon in above- and belowground biomass than other vegetated ecosystems. Planted mangrove carbon stocks increased with age, but there were large differences for sites of similar age. Soil carbon varied widely across sites (2-367 Mg C/ha), with ecosystem averages that ranged from 49 to 156 Mg C/ha. For the first time, microbial mats were documented to contain soil carbon pools comparable to vascular plant-dominated ecosystems, and could arguably be recognized as a unique blue carbon ecosystem. Total ecosystem carbon stocks ranged widely from 2 to 515 Mg C/ha (seagrass bed and mangrove, respectively). Seagrass beds had the lowest carbon stock per unit area, but the largest stock per total area due to their large spatial coverage. Compared to similar ecosystems globally, mangroves and marshes in the UAE have lower plant and soil carbon stocks; however, the difference in soil stocks is far larger than with plant stocks. This incongruent difference between stocks is likely due to poor carbon preservation under conditions of weakly reduced soils (200-350 mV), coarse-grained sediments, and active shoreline migration. This work represents the first attempt to produce a country-wide coastal ecosystem carbon accounting using a uniform sampling protocol, and was motivated by specific policy goals identified by the Abu Dhabi Global Environmental Data Initiative. These carbon stock data supported two objectives: to quantify carbon stocks and infer sequestration capacity in arid blue carbon ecosystems, and to explore the potential to incorporate blue carbon science into national reporting and planning documents. © 2016 by the Ecological Society of America.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFMOS32A..03A','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFMOS32A..03A"><span>Carbon Transformations and Source - Sink Dynamics along a River, Marsh, Estuary, Ocean Continuum</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Anderson, I. C.; Crosswell, J.; Czapla, K.; Van Dam, B.</p> <p>2017-12-01</p> <p>Estuaries, the transition zone between land and the coastal ocean, are highly dynamic systems in which carbon sourced from watersheds, marshes, atmosphere, and ocean may be transformed, sequestered, or exported. The net fate of carbon in estuaries, governed by the interactions of biotic and physical drivers varying on spatial and temporal scales, is currently uncertain because of limited observational data. In this study, conducted in a temperate, microtidal, and shallow North Carolina USA estuary, carbon exchanges via river, tributary, and fringing salt marsh, air-water fluxes, sediment C accumulation, and metabolism were monitored over two-years, with sharply different amounts of rainfall. Air-water CO2 fluxes and metabolic variables were simultaneously measured in channel and shoal by conducting high-resolution surveys at dawn, dusk and the following dawn. Marsh CO2 exchanges, sediment C inputs, and lateral exports of DIC and DOC were also measured. Carbon flows between estuary regions and export to the coastal ocean were calculated by quantifying residual transport of DIC and TOC down-estuary as flows were modified by sources, sinks and internal transformations. Variation in metabolic rates, CO2, TOC and DIC exchanges were large when determined for short time and limited spatial scales. However, when scaled to annual and whole estuarine scales, variation tended to decrease because of counteracting metabolic rates and fluxes between channel and shoal or between seasons. Although overall salt marshes accumulated OC, they were a negligible source of DIC and DOC to the estuary, and net inputs of C to the marsh were mainly derived from sediment OC. These results, as observed in other observational studies of estuaries, show that riverine input, light, temperature and metabolism are major controls on carbon cycling. Comparison of our results with other types of estuaries varying in depth, latitude, and nutrification demonstrates large discrepancies underscoring the limitations of current sampling designs, models and datasets in representing system-scale diversity; thus, a more practical approach may be to choose a small number of representative coastal systems, coordinate research efforts to quantify the relevant fluxes and constrain a range of environmental conditions that influence carbon cycling.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25440888','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25440888"><span>The childhood obesity epidemic as a result of nongenetic evolution: the maternal resources hypothesis.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Archer, Edward</p> <p>2015-01-01</p> <p>Over the past century, socioenvironmental evolution (eg, reduced pathogenic load, decreased physical activity, and improved nutrition) led to cumulative increments in maternal energy resources (ie, body mass and adiposity) and decrements in energy expenditure and metabolic control. These decrements reduced the competition between maternal and fetal energy demands and increased the availability of energy substrates to the intrauterine milieu. This perturbation of mother-conceptus energy partitioning stimulated fetal pancreatic β-cell and adipocyte hyperplasia, thereby inducing an enduring competitive dominance of adipocytes over other tissues in the acquisition and sequestering of nutrient energy via intensified insulin secretion and hyperplastic adiposity. At menarche, the competitive dominance of adipocytes was further amplified via hormone-induced adipocyte hyperplasia and weight-induced decrements in physical activity. These metabolic and behavioral effects were propagated progressively when obese, inactive, metabolically compromised women produced progressively larger, more inactive, metabolically compromised children. Consequently, the evolution of human energy metabolism was markedly altered. This phenotypic evolution was exacerbated by increments in the use of cesarean sections, which allowed both the larger fetuses and the metabolically compromised mothers who produced them to survive and reproduce. Thus, natural selection was iatrogenically rendered artificial selection, and the frequency of obese, inactive, metabolically compromised phenotypes increased in the global population. By the late 20th century, a metabolic tipping point was reached at which the postprandial insulin response was so intense, the relative number of adipocytes so large, and inactivity so pervasive that the competitive dominance of adipocytes in the sequestering of nutrient energy was inevitable and obesity was unavoidable. Copyright © 2015 Mayo Foundation for Medical Education and Research. Published by Elsevier Inc. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.usgs.gov/ds/414/','USGSPUBS'); return false;" href="https://pubs.usgs.gov/ds/414/"><span>Mapping the Mineral Resource Base for Mineral Carbon-Dioxide Sequestration in the Conterminous United States</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Krevor, S.C.; Graves, C.R.; Van Gosen, B. S.; McCafferty, A.E.</p> <p>2009-01-01</p> <p>This database provides information on the occurrence of ultramafic rocks in the conterminous United States that are suitable for sequestering captured carbon dioxide in mineral form, also known as mineral carbon-dioxide sequestration. Mineral carbon-dioxide sequestration is a proposed greenhouse gas mitigation technology whereby carbon dioxide (CO2) is disposed of by reacting it with calcium or magnesium silicate minerals to form a solid magnesium or calcium carbonate product. The technology offers a large capacity to permanently store CO2 in an environmentally benign form via a process that takes little effort to verify or monitor after disposal. These characteristics are unique among its peers in greenhouse gas disposal technologies. The 2005 Intergovernmental Panel on Climate Change report on Carbon Dioxide Capture and Storage suggested that a major gap in mineral CO2 sequestration is locating the magnesium-silicate bedrock available to sequester the carbon dioxide. It is generally known that silicate minerals with high concentrations of magnesium are suitable for mineral carbonation. However, no assessment has been made in the United States that details their geographical distribution and extent, nor has anyone evaluated their potential for use in mineral carbonation. Researchers at Columbia University and the U.S. Geological Survey have developed a digital geologic database of ultramafic rocks in the conterminous United States. Data were compiled from varied-scale geologic maps of magnesium-silicate ultramafic rocks. The focus of our national-scale map is entirely on ultramafic rock types, which typically consist primarily of olivine- and serpentine-rich rocks. These rock types are potentially suitable as source material for mineral CO2 sequestration.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/20683647','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/20683647"><span>Caterpillar chemical defense and parasitoid success: Cotesia congregata parasitism of Ceratomia catalpae.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Lampert, Evan C; Dyer, Lee A; Bowers, M Deane</p> <p>2010-09-01</p> <p>Sequestration of plant compounds by herbivorous insects as a defense against predators is well documented; however, few studies have examined the effectiveness of sequestration as a defense against parasitoids. One assumption of the "nasty host" hypothesis is that sequestration of plant defense compounds is deleterious to parasitoid development. We tested this hypothesis with larvae of the sequestering sphingid Ceratomia catalpae, which is heavily parasitized by the endoparasitoid Cotesia congregata, despite sequestering high concentrations of the iridoid glycoside catalpol from their catalpa host plants. We collected C. catalpae and catalpa leaves from six populations in the Eastern US, and allowed any C. congregata to emerge in the lab. Leaf iridoid glycosides and caterpillar iridoid glycosides were quantified, and we examined associations between sequestered caterpillar iridoid glycosides and C. congregata performance. Caterpillar iridoid glycosides were not associated with C. congregata field parasitism or number of offspring produced. Although wasp survival was over 90% in all populations, there was a slight negative relationship between caterpillar iridoid glycosides and wasp survival. Iridoid glycosides were present in caterpillars at levels that are deterrent to a variety of vertebrate and invertebrate predators. Thus, our results support the alternative hypothesis that unpalatable, chemically defended hosts are "safe havens" for endoparasitoids. Future trials examining the importance of catalpol sequestration to potential natural enemies of C. congregata and C. catalpae are necessary to strengthen this conclusion.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23246940','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23246940"><span>Red mud as a carbon sink: variability, affecting factors and environmental significance.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Si, Chunhua; Ma, Yingqun; Lin, Chuxia</p> <p>2013-01-15</p> <p>The capacity of red mud to sequester CO(2) varied markedly due to differences in bauxite type, processing and disposal methods. Calcium carbonates were the dominant mineral phases responsible for the carbon sequestration in the investigated red mud types. The carbon sequestration capacity of red mud was not fully exploited due to shortages of soluble divalent cations for formation of stable carbonate minerals. Titanate and silicate ions were the two major oxyanions that appeared to strongly compete with carbonate ions for the available soluble Ca. Supply of additional soluble Ca and Mg could be a viable pathway for maximizing carbon sequestration in red mud and simultaneously reducing the causticity of red mud. It is roughly estimated that over 100 million tonnes of CO(2) have been unintentionally sequestered in red mud around the world to date through the natural weathering of historically produced red mud. Based on the current production rate of red mud, it is likely that some 6 million tonnes of CO(2) will be sequestered annually through atmospheric carbonation. If appropriate technologies are in place for incorporating binding cations into red mud, approximately 6 million tonnes of additional CO(2) can be captured and stored in the red mud while the hazardousness of red mud is simultaneously reduced. Copyright © 2012 Elsevier B.V. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/1052520-biochar-produced-from-anaerobically-digested-fiber-reduces-phosphorus-dairy-lagoons','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/1052520-biochar-produced-from-anaerobically-digested-fiber-reduces-phosphorus-dairy-lagoons"><span>Biochar Produced from Anaerobically Digested Fiber Reduces Phosphorus in Dairy Lagoons</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Streubel, Jason D.; Collins, Harold P.; Tarara, Julie M.</p> <p>2012-01-01</p> <p>This study evaluated the use of biochar produced from anaerobic digester dairy fiber (ADF) to sequester phosphorus (P) from dairy lagoons. The ADF was collected from a plugged flow digester, air-dried to <8% water content, and pelletized. Biochar was produced by slow pyrolysis in a barrel retort. The potential of biochar to reduce P in the anaerobic digester effluent (ADE) was assessed in small-scale filter systems through which the effluent was circulated. Biochar sequestered an average of 381 mg L -1 P from the ADE, and 4 g L -1 ADF was captured as a coating on the biochar. Theremore » was an increase of total (1.9 g kg -1), Olsen (763 mg kg -1), and water-extractable P (914 mg kg -1) bound to the biochar after 15 d of filtration. This accounted for a recovery of 32% of the P in the ADE. The recovered P on the biochar was analyzed using 31P nuclear magnetic resonance for P speciation, which confirmed the recovery of inorganic orthophosphate after liquid extraction of the biochar and the presence of inextractable Ca-P in the solid state. The inorganic phosphate was sequestered on the biochar through physical and weak chemical bonding. Finally, results indicate that biochar could be a beneficial component to P reduction in the dairy system.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70034900','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70034900"><span>The key to commercial-scale geological CO2 sequestration: Displaced fluid management</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Surdam, R.C.; Jiao, Z.; Stauffer, P.; Miller, T.</p> <p>2011-01-01</p> <p>The Wyoming State Geological Survey has completed a thorough inventory and prioritization of all Wyoming stratigraphic units and geologic sites capable of sequestering commercial quantities of CO2 (5-15 Mt CO 2/year). This multi-year study identified the Paleozoic Tensleep/Weber Sandstone and Madison Limestone (and stratigraphic equivalent units) as the leading clastic and carbonate reservoir candidates for commercial-scale geological CO2 sequestration in Wyoming. This conclusion was based on unit thickness, overlying low permeability lithofacies, reservoir storage and continuity properties, regional distribution patterns, formation fluid chemistry characteristics, and preliminary fluid-flow modeling. This study also identified the Rock Springs Uplift in southwestern Wyoming as the most promising geological CO2 sequestration site in Wyoming and probably in any Rocky Mountain basin. The results of the WSGS CO2 geological sequestration inventory led the agency and colleagues at the UW School of Energy Resources Carbon Management Institute (CMI) to collect available geologic, petrophysical, geochemical, and geophysical data on the Rock Springs Uplift, and to build a regional 3-D geologic framework model of the Uplift. From the results of these tasks and using the FutureGen protocol, the WSGS showed that on the Rock Springs Uplift, the Weber Sandstone has sufficient pore space to sequester 18 billion tons (Gt) of CO2, and the Madison Limestone has sufficient pore space to sequester 8 Gt of CO2. ?? 2011 Published by Elsevier Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25533102','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25533102"><span>Nanoparticle growth and surface chemistry changes in cell-conditioned culture medium.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Kendall, Michaela; Hodges, Nikolas J; Whitwell, Harry; Tyrrell, Jess; Cangul, Hakan</p> <p>2015-02-05</p> <p>When biomolecules attach to engineered nanoparticle (ENP) surfaces, they confer the particles with a new biological identity. Physical format may also radically alter, changing ENP stability and agglomeration state within seconds. In order to measure which biomolecules are associated with early ENP growth, we studied ENPs in conditioned medium from A549 cell culture, using dynamic light scattering (DLS) and linear trap quadrupole electron transfer dissociation mass spectrometry. Two types of 100 nm polystyrene particles (one uncoated and one with an amine functionalized surface) were used to measure the influence of surface type. In identically prepared conditioned medium, agglomeration was visible in all samples after 1 h, but was variable, indicating inter-sample variability in secretion rates and extracellular medium conditions. In samples conditioned for 1 h or more, ENP agglomeration rates varied significantly. Agglomerate size measured by DLS was well correlated with surface sequestered peptide number for uncoated but not for amine coated polystyrene ENPs. Amine-coated ENPs grew much faster and into larger agglomerates associated with fewer sequestered peptides, but including significant sequestered lactose dehydrogenase. We conclude that interference with extracellular peptide balance and oxidoreductase activity via sequestration is worthy of further study, as increased oxidative stress via this new mechanism may be important for cell toxicity. © 2014 The Author(s) Published by the Royal Society. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.dtic.mil/docs/citations/ADA285222','DTIC-ST'); return false;" href="http://www.dtic.mil/docs/citations/ADA285222"><span>Destruction of Navy Hazardous Wastes by Supercritical Water Oxidation</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.dtic.mil/">DTIC Science & Technology</a></p> <p></p> <p>1994-08-01</p> <p>cleaning and derusting (nitrite and citric acid solutions), electroplating ( acids and metal bearing solutions), electronics and refrigeration... acid forming chemical species or that contain a large amount of dissolved solids present a challenge to current SCWO •-chnology. Approved for public...Waste streams that contain a large amount of mineral- acid forming chemical species or that contain a large amount of dissolved solids present a challenge</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5825053','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5825053"><span>Empirical relationships between tree fall and landscape-level amounts of logging and fire</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Blanchard, Wade; Blair, David; McBurney, Lachlan; Stein, John; Banks, Sam C.</p> <p>2018-01-01</p> <p>Large old trees are critically important keystone structures in forest ecosystems globally. Populations of these trees are also in rapid decline in many forest ecosystems, making it important to quantify the factors that influence their dynamics at different spatial scales. Large old trees often occur in forest landscapes also subject to fire and logging. However, the effects on the risk of collapse of large old trees of the amount of logging and fire in the surrounding landscape are not well understood. Using an 18-year study in the Mountain Ash (Eucalyptus regnans) forests of the Central Highlands of Victoria, we quantify relationships between the probability of collapse of large old hollow-bearing trees at a site and the amount of logging and the amount of fire in the surrounding landscape. We found the probability of collapse increased with an increasing amount of logged forest in the surrounding landscape. It also increased with a greater amount of burned area in the surrounding landscape, particularly for trees in highly advanced stages of decay. The most likely explanation for elevated tree fall with an increasing amount of logged or burned areas in the surrounding landscape is change in wind movement patterns associated with cutblocks or burned areas. Previous studies show that large old hollow-bearing trees are already at high risk of collapse in our study area. New analyses presented here indicate that additional logging operations in the surrounding landscape will further elevate that risk. Current logging prescriptions require the protection of large old hollow-bearing trees on cutblocks. We suggest that efforts to reduce the probability of collapse of large old hollow-bearing trees on unlogged sites will demand careful landscape planning to limit the amount of timber harvesting in the surrounding landscape. PMID:29474487</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29474487','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29474487"><span>Empirical relationships between tree fall and landscape-level amounts of logging and fire.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Lindenmayer, David B; Blanchard, Wade; Blair, David; McBurney, Lachlan; Stein, John; Banks, Sam C</p> <p>2018-01-01</p> <p>Large old trees are critically important keystone structures in forest ecosystems globally. Populations of these trees are also in rapid decline in many forest ecosystems, making it important to quantify the factors that influence their dynamics at different spatial scales. Large old trees often occur in forest landscapes also subject to fire and logging. However, the effects on the risk of collapse of large old trees of the amount of logging and fire in the surrounding landscape are not well understood. Using an 18-year study in the Mountain Ash (Eucalyptus regnans) forests of the Central Highlands of Victoria, we quantify relationships between the probability of collapse of large old hollow-bearing trees at a site and the amount of logging and the amount of fire in the surrounding landscape. We found the probability of collapse increased with an increasing amount of logged forest in the surrounding landscape. It also increased with a greater amount of burned area in the surrounding landscape, particularly for trees in highly advanced stages of decay. The most likely explanation for elevated tree fall with an increasing amount of logged or burned areas in the surrounding landscape is change in wind movement patterns associated with cutblocks or burned areas. Previous studies show that large old hollow-bearing trees are already at high risk of collapse in our study area. New analyses presented here indicate that additional logging operations in the surrounding landscape will further elevate that risk. Current logging prescriptions require the protection of large old hollow-bearing trees on cutblocks. We suggest that efforts to reduce the probability of collapse of large old hollow-bearing trees on unlogged sites will demand careful landscape planning to limit the amount of timber harvesting in the surrounding landscape.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27252530','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27252530"><span>Ebola Virus Does Not Induce Stress Granule Formation during Infection and Sequesters Stress Granule Proteins within Viral Inclusions.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Nelson, Emily V; Schmidt, Kristina M; Deflubé, Laure R; Doğanay, Sultan; Banadyga, Logan; Olejnik, Judith; Hume, Adam J; Ryabchikova, Elena; Ebihara, Hideki; Kedersha, Nancy; Ha, Taekjip; Mühlberger, Elke</p> <p>2016-08-15</p> <p>A hallmark of Ebola virus (EBOV) infection is the formation of viral inclusions in the cytoplasm of infected cells. These viral inclusions contain the EBOV nucleocapsids and are sites of viral replication and nucleocapsid maturation. Although there is growing evidence that viral inclusions create a protected environment that fosters EBOV replication, little is known about their role in the host response to infection. The cellular stress response is an effective antiviral strategy that leads to stress granule (SG) formation and translational arrest mediated by the phosphorylation of a translation initiation factor, the α subunit of eukaryotic initiation factor 2 (eIF2α). Here, we show that selected SG proteins are sequestered within EBOV inclusions, where they form distinct granules that colocalize with viral RNA. These inclusion-bound (IB) granules are functionally and structurally different from canonical SGs. Formation of IB granules does not indicate translational arrest in the infected cells. We further show that EBOV does not induce formation of canonical SGs or eIF2α phosphorylation at any time postinfection but is unable to fully inhibit SG formation induced by different exogenous stressors, including sodium arsenite, heat, and hippuristanol. Despite the sequestration of SG marker proteins into IB granules, canonical SGs are unable to form within inclusions, which we propose might be mediated by a novel function of VP35, which disrupts SG formation. This function is independent of VP35's RNA binding activity. Further studies aim to reveal the mechanism for SG protein sequestration and precise function within inclusions. Although progress has been made developing antiviral therapeutics and vaccines against the highly pathogenic Ebola virus (EBOV), the cellular mechanisms involved in EBOV infection are still largely unknown. To better understand these intracellular events, we investigated the cellular stress response, an antiviral pathway manipulated by many viruses. We show that EBOV does not induce formation of stress granules (SGs) in infected cells and is therefore unrestricted by their concomitant translational arrest. We identified SG proteins sequestered within viral inclusions, which did not impair protein translation. We further show that EBOV is unable to block SG formation triggered by exogenous stress early in infection. These findings provide insight into potential targets of therapeutic intervention. Additionally, we identified a novel function of the interferon antagonist VP35, which is able to disrupt SG formation. Copyright © 2016, American Society for Microbiology. All Rights Reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5068162','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5068162"><span>Probiotic Lactobacillus rhamnosus Reduces Organophosphate Pesticide Absorption and Toxicity to Drosophila melanogaster</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Trinder, Mark; McDowell, Tim W.; Daisley, Brendan A.; Ali, Sohrab N.; Leong, Hon S.; Sumarah, Mark W.</p> <p>2016-01-01</p> <p>ABSTRACT Organophosphate pesticides used in agriculture can pose health risks to humans and wildlife. We hypothesized that dietary supplementation with Lactobacillus, a genus of commensal bacteria, would reduce absorption and toxicity of consumed organophosphate pesticides (parathion and chlorpyrifos [CP]). Several Lactobacillus species were screened for toleration of 100 ppm of CP or parathion in MRS broth based on 24-h growth curves. Certain Lactobacillus strains were unable to reach stationary-phase culture maxima and displayed an abnormal culture morphology in response to pesticide. Further characterization of commonly used, pesticide-tolerant and pesticide-susceptible, probiotic Lactobacillus rhamnosus strain GG (LGG) and L. rhamnosus strain GR-1 (LGR-1), respectively, revealed that both strains could significantly sequester organophosphate pesticides from solution after 24-h coincubations. This effect was independent of metabolic activity, as L. rhamnosus GG did not hydrolyze CP and no difference in organophosphate sequestration was observed between live and heat-killed strains. Furthermore, LGR-1 and LGG reduced the absorption of 100 μM parathion or CP in a Caco-2 Transwell model of the small intestine epithelium. To determine the effect of sequestration on acute toxicity, newly eclosed Drosophila melanogaster flies were exposed to food containing 10 μM CP with or without supplementation with live LGG. Supplementation with LGG simultaneously, but not with administration of CP 3 days prior (prophylactically), mitigated CP-induced mortality. In summary, the results suggest that L. rhamnosus may be useful for reducing toxic organophosphate pesticide exposure via passive binding. These findings could be transferable to clinical and livestock applications due to affordability and practical ability to supplement products with food-grade bacteria. IMPORTANCE The consequences of environmental pesticide pollution due to widespread usage in agriculture and soil leaching are becoming a major societal concern. Although the long-term effects of low-dose pesticide exposure for humans and wildlife remain largely unknown, logic suggests that these chemicals are not aligned with ecosystem health. This observation is most strongly supported by the agricultural losses associated with honeybee population declines, known as colony collapse disorder, in which pesticide usage is a likely trigger. Lactobacilli are bacteria used as beneficial microorganisms in fermented foods and have shown potentials to sequester and degrade environmental toxins. This study demonstrated that commonly used probiotic strains of lactobacilli could sequester, but not metabolize, organophosphate pesticides (parathion and chlorpyrifos). This Lactobacillus-mediated sequestration was associated with decreased intestinal absorption and insect toxicity in appropriate models. These findings hold promise for supplementing human, livestock, or apiary foods with probiotic microorganisms to reduce organophosphate pesticide exposure. PMID:27520820</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/3249023','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/3249023"><span>Metabolism of trimethylamines in kelp bass (Paralabrax clathratus) and marine and freshwater pink salmon (Oncorhynchus gorbuscha).</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Charest, R P; Chenoweth, M; Dunn, A</p> <p>1988-01-01</p> <p>3H or 14C labeled tracers were used to investigate the metabolism of trimethylamine (TMA), trimethylamine oxide (TMAO), choline, and betaine in free swimming kelp bass (Paralabrax clathratus). An indwelling cannula in the ventral aorta was used to administer tracer and with-draw blood samples. The concentrations of TMA and TMAO were determined in liver, muscle, and plasma. The TMA liver content is higher than that of muscle (0.85 vs less than 0.01 mumoles/g wet tissue) while the amount of TMAO in muscle greatly exceeds its liver concentration (60 vs 0.04 mumoles/g wet tissue). Prolonged fasting (21 and 75 days) or feeding the fish a squid diet containing high levels of TMAO did not alter the tissue concentrations of TMA or TMAO, suggesting that these compounds are endogenous in origin and that their tissue concentrations are subject to regulation. Comparison of the radiospecific activities of TMA and TMAO, and the administered TMA tracer suggest that TMA is channeled directly to TMAO in the liver without equilibration in the hepatic TMA pool. The conversion kinetics of TMA to TMAO and the distribution of these amines in liver and muscle with time suggest that labeled TMA is rapidly taken up into a sequestered pool from which it is slowly released, oxidized to TMAO in the liver, and then transported via the circulation to the muscle mass. The location of this proposed sequestered TMA pool was not determined. Experiments with labeled choline and betaine suggest that these compounds are interconverted in the liver and that enzymes are present for conversion of choline in equilibrium betaine----TMA----TMAO. Labeled dimethylamine (DMA) was not metabolized and is, therefore, probably not a precursor of TMA and TMAO. [14C]Trimethylamine (TMA) was also used to investigate the possible role of trimethylamine oxide (TMAO) as an osmoregulatory compound in migrating prespawning cannulated Pacific pink salmon (Oncorhynchus gorbuscha) taken from marine or fresh water environments. Marine and fresh water salmon oxidized administered [14C]TMA to TMAO; labeled metabolites other than TMA and TMAO were not detected. Four hours after [14C]TMA injection about 10% of the administered dose was present in muscle as labeled TMAO and about 33% as TMA. Unlike our finding in kelp bass, [14C]TMAO was not recovered in liver, although low amounts of labeled TMA were found (0.4% of administered dose). Labeled TMA and TMAO, however, were detected in liver after [14C]betaine administration to a marine salmon, indicating that TMA-mono-oxygenase is present in salmon liver.(ABSTRACT TRUNCATED AT 400 WORDS)</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li class="active"><span>17</span></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_17 --> <div id="page_18" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li class="active"><span>18</span></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="341"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013EGUGA..15.3982S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013EGUGA..15.3982S"><span>Seal assessment and estimated storage capacities of a targeted CO2 reservoir based on new displacement pressures in SW Wyoming, U.S.A.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Spaeth, Lynsey; Campbell-Stone, Erin; Lynds, Ranie; Frost, Carol; McLaughlin, J. Fred</p> <p>2013-04-01</p> <p>Carbon capture and storage locations are being investigated throughout the state of Wyoming, USA, in preparation for sequestration of greenhouse gases. At potential storage sites, confining units must be identified that are capable of ensuring stored carbon dioxide remains in place at depth. Previous fluid inclusion volatile work indicates that Triassic formations in southwestern Wyoming act as a confining system on the Rock Springs uplift (RSU). An investigation of the Triassic Dinwoody Formation using mercury capillary entry pressure was conducted to calculate column height potential for CO2 sequestration on the RSU. A stratigraphic test well drilled on the RSU recovered 27.4 meters of core from the Dinwoody Formation. It is dominantly a brownish-red, very fine-grained sandy and micaceous siltstone with minor layers of thin mudstone and minor amounts of anhydrite. Four samples were taken from this core for mercury injection capillary pressure (MICP) analysis. During MICP analysis, mercury is injected into the sample over a range of pressures increased in steps. Only when sufficient pressure is applied will the mercury penetrate into the pore system and at this pressure a confining system will begin to leak. The mercury entry pressures for the Dinwoody samples range from 6.58 to18.85 megapascals and were converted to entry pressures for brine/CO2 systems. Previous simulations indicate that sequestering commercial quantities of CO2 (5-15 megatons CO2/year) over the course of 50 years can be accommodated at the RSU. Determination of the total possible capacity requires knowledge of the column height, i.e. the vertical thickness of CO2 that can be safely injected without caprock failure. Using converted pressures for brine/CO2 systems, the interfacial tensions of CO2, water, and substrate, as well as the densities of CO2 and brine, column heights were calculated for the RSU. It has been suggested by other research that supercritical CO2 and brine may behave as a single wetting phase at elevated pressures and temperatures, resulting in an interfacial tension of 0 milliNewton/meter. Under these conditions the pore throat radius of sealing units is assumed to be the principle inhibitor to flow through the seal. Experimental data indicate pore throat radii range from 39.2 to 113.5 nanometers in the confining system, and preliminary column height calculations indicate that, depending on the size of the plume, reservoir thickness will most likely be the limiting factor to the amount of CO2 that can be sequestered rather than the column height.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2005AGUFM.B51A0183T','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2005AGUFM.B51A0183T"><span>Sequestration of Carbon in Mycorrhizal Fungi Under Nitrogen Fertilization</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Treseder, K. K.; Turner, K. M.</p> <p>2005-12-01</p> <p>Mycorrhizal fungi are root symbionts that facilitate plant uptake of soil nutrients in exchange for plant carbohydrates. They grow in almost every terrestrial ecosystem on earth, form relationships with about 80% of plant species, and receive 10 to 20% of the carbon fixed by their host plants. As such, they could potentially sequester a significant amount of carbon in ecosystems. We hypothesized that nitrogen fertilization would decrease carbon storage in mycorrhizal fungi, because plants should reduce investment of carbon in mycorrhizal fungi when nitrogen availability is high. We measured the abundance of two major groups of mycorrhizal fungi, arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) fungi, in control and nitrogen-fertilized plots within three boreal ecosystems of inland Alaska. The ecosystems represented different recovery stages following severe fire, and comprised a young site dominated by AM fungi, an old site dominated by ECM fungi, and an intermediate site co-dominated by both groups. Pools of mycorrhizal carbon included root-associated AM and ECM structures, soil-associated AM hyphae, and soil-associated glomalin. Glomalin is a glycoprotein produced only by AM fungi. It is present in the cell walls of AM hyphae, and then is deposited in the soil as the hyphae senesce. Nitrogen significantly altered total mycorrhizal carbon pools, but its effect varied by site (site * N interaction, P = 0.05). Under nitrogen fertilization, mycorrhizal carbon was reduced from 99 to 50 g C m2 in the youngest site, was increased from 124 to 203 g C m2 in the intermediate-aged site, and remained at 35 g C m2 in the oldest site. The changes in total mycorrhizal carbon stocks were driven mostly by changes in glomalin (site * N interaction, P = 0.05), and glomalin stocks were strongly correlated with AM hyphal abundance (P < 0.01). Nevertheless, it is not clear why AM hyphae responded differently to nitrogen fertilization in the different sites. Carbon stocks within root-associated AM structures increased significantly with nitrogen fertilization across all sites (P = 0.001), as did root-associated ECM structures (P = 0.021). The amount of carbon sequestered within living mycorrhizal structures (0.013 to 0.21 g m2), however, was modest compared to that of glomalin (91 g m2). We conclude that allocation by AM fungi to hyphal growth influenced the size of glomalin stocks in the soil, and that nitrogen fertilization altered investment in hyphal growth, with potential consequences for soil carbon storage. However, the nitrogen response was inconsistent among boreal forest ecosystems. An understanding of the mechanisms underlying this variation would improve our ability to predict ecosystem feedbacks to global change.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3770333','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3770333"><span>Autophagy sequesters damaged lysosomes to control lysosomal biogenesis and kidney injury</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Maejima, Ikuko; Takahashi, Atsushi; Omori, Hiroko; Kimura, Tomonori; Takabatake, Yoshitsugu; Saitoh, Tatsuya; Yamamoto, Akitsugu; Hamasaki, Maho; Noda, Takeshi; Isaka, Yoshitaka; Yoshimori, Tamotsu</p> <p>2013-01-01</p> <p>Diverse causes, including pathogenic invasion or the uptake of mineral crystals such as silica and monosodium urate (MSU), threaten cells with lysosomal rupture, which can lead to oxidative stress, inflammation, and apoptosis or necrosis. Here, we demonstrate that lysosomes are selectively sequestered by autophagy, when damaged by MSU, silica, or the lysosomotropic reagent L-Leucyl-L-leucine methyl ester (LLOMe). Autophagic machinery is recruited only on damaged lysosomes, which are then engulfed by autophagosomes. In an autophagy-dependent manner, low pH and degradation capacity of damaged lysosomes are recovered. Under conditions of lysosomal damage, loss of autophagy causes inhibition of lysosomal biogenesis in vitro and deterioration of acute kidney injury in vivo. Thus, we propose that sequestration of damaged lysosomes by autophagy is indispensable for cellular and tissue homeostasis. PMID:23921551</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23921551','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23921551"><span>Autophagy sequesters damaged lysosomes to control lysosomal biogenesis and kidney injury.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Maejima, Ikuko; Takahashi, Atsushi; Omori, Hiroko; Kimura, Tomonori; Takabatake, Yoshitsugu; Saitoh, Tatsuya; Yamamoto, Akitsugu; Hamasaki, Maho; Noda, Takeshi; Isaka, Yoshitaka; Yoshimori, Tamotsu</p> <p>2013-08-28</p> <p>Diverse causes, including pathogenic invasion or the uptake of mineral crystals such as silica and monosodium urate (MSU), threaten cells with lysosomal rupture, which can lead to oxidative stress, inflammation, and apoptosis or necrosis. Here, we demonstrate that lysosomes are selectively sequestered by autophagy, when damaged by MSU, silica, or the lysosomotropic reagent L-Leucyl-L-leucine methyl ester (LLOMe). Autophagic machinery is recruited only on damaged lysosomes, which are then engulfed by autophagosomes. In an autophagy-dependent manner, low pH and degradation capacity of damaged lysosomes are recovered. Under conditions of lysosomal damage, loss of autophagy causes inhibition of lysosomal biogenesis in vitro and deterioration of acute kidney injury in vivo. Thus, we propose that sequestration of damaged lysosomes by autophagy is indispensable for cellular and tissue homeostasis.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/170446','DOE-PATENT-XML'); return false;" href="https://www.osti.gov/biblio/170446"><span>Method for treating liquid wastes</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/doepatents">DOEpatents</a></p> <p>Katti, K.V.; Volkert, W.A.; Singh, P.; Ketring, A.R.</p> <p>1995-12-26</p> <p>The method of treating liquid waste in a media is accomplished by exposing the media to phosphinimines and sequestering {sup 99}Tc from the media by the phosphinimine (PN) functionalities. The system for treating the liquid waste in the media includes extraction of {sup 99}TcO{sub 4}{sup {minus}} from aqueous solutions into organic solvents or mixed organic/polar media, extraction of {sup 99}Tc from solutions on a solid matrix by using a container containing PN functionalities on solid matrices including an inlet and outlet for allowing flow of media through an immobilized phosphinimine ligand system contained within the container. Also, insoluble suspensions of phosphinimine functionalities on solid matrices in liquid solutions or present on supported liquid membranes (SLM) can be used to sequester {sup 99}Tc from those liquids. 6 figs.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/870223','DOE-PATENT-XML'); return false;" href="https://www.osti.gov/servlets/purl/870223"><span>Method for treating liquid wastes</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/doepatents">DOEpatents</a></p> <p>Katti, Kattesh V.; Volkert, Wynn A.; Singh, Prahlad; Ketring, Alan R.</p> <p>1995-01-01</p> <p>The method of treating liquid waste in a media is accomplished by exposing the media to phosphinimines and sequestering .sup.99 Tc from the media by the phosphinimine (PN) functionalities. The system for treating the liquid waste in the media includes extraction of .sup.99 TcO.sub.4.sup.- from aqueous solutions into organic solvents or mixed organic/polar media, extraction of .sup.99 Tc from solutions on a solid matrix by using a container containing PN functionalities on solid matrices including an inlet and outlet for allowing flow of media through an immobilized phosphinimine ligand system contained within the container. Also, insoluble suspensions of phosphinimine functionalities on solid matrices in liquid solutions or present on supported liquid membranes (SLM) can be used to sequester .sup.99 Tc from those liquids.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/17351046','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/17351046"><span>The Escherichia coli regulator of sigma 70 protein, Rsd, can up-regulate some stress-dependent promoters by sequestering sigma 70.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mitchell, Jennie E; Oshima, Taku; Piper, Sarah E; Webster, Christine L; Westblade, Lars F; Karimova, Gouzel; Ladant, Daniel; Kolb, Annie; Hobman, Jon L; Busby, Stephen J W; Lee, David J</p> <p>2007-05-01</p> <p>The Escherichia coli Rsd protein forms complexes with the RNA polymerase sigma(70) factor, but its biological role is not understood. Transcriptome analysis shows that overexpression of Rsd causes increased expression from some promoters whose expression depends on the alternative sigma(38) factor, and this was confirmed by experiments with lac fusions at selected promoters. The LP18 substitution in Rsd increases the Rsd-dependent stimulation of these promoter-lac fusions. Analysis with a bacterial two-hybrid system shows that the LP18 substitution in Rsd increases its interaction with sigma(70). Our experiments support a model in which the role of Rsd is primarily to sequester sigma(70), thereby increasing the levels of RNA polymerase containing the alternative sigma(38) factor.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012PhBio...9e6004D','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012PhBio...9e6004D"><span>A simple biosynthetic pathway for large product generation from small substrate amounts</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Djordjevic, Marko; Djordjevic, Magdalena</p> <p>2012-10-01</p> <p>A recently emerging discipline of synthetic biology has the aim of constructing new biosynthetic pathways with useful biological functions. A major application of these pathways is generating a large amount of the desired product. However, toxicity due to the possible presence of toxic precursors is one of the main problems for such production. We consider here the problem of generating a large amount of product from a potentially toxic substrate. To address this, we propose a simple biosynthetic pathway, which can be induced in order to produce a large number of the product molecules, by keeping the substrate amount at low levels. Surprisingly, we show that the large product generation crucially depends on fast non-specific degradation of the substrate molecules. We derive an optimal induction strategy, which allows as much as three orders of magnitude increase in the product amount through biologically realistic parameter values. We point to a recently discovered bacterial immune system (CRISPR/Cas in E. coli) as a putative example of the pathway analysed here. We also argue that the scheme proposed here can be used not only as a stand-alone pathway, but also as a strategy to produce a large amount of the desired molecules with small perturbations of endogenous biosynthetic pathways.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/14319400','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/14319400"><span>THE PRESENCE OF ENDOGENOUS PYROGEN IN NORMAL RABBIT TISSUES.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>SNELL, E S; ATKINS, E</p> <p>1965-06-01</p> <p>Saline extracts of homogenized, uninfected, rabbit tissues produced febrile responses when injected intravenously into rabbits. Extracts of muscle, lung, and heart evoked fevers that were similar to those induced by leucocyte pyrogen; extracts of spleen, liver, and kidney caused more sustained fevers. The minimal pyrogenic dose appeared to be between 1.5 and 3 gm wet weight of tissue. Evidence is presented that neither Gram-negative bacterial endotoxin nor polymorphonuclear leucocytes (circulating or sequestered in the tissues) can be implicated as the source of pyrogen in tissue extracts. It seems likely, therefore, that a pyrogenic material of truly endogenous origin is widely distributed in tissues. Tissue pyrogen appears to be a large molecule which is relatively resistant to treatment with acid but not with alkali. Possible pathological roles for this endogenous agent (or agents) are briefly indicated.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013AGUFMGC42C..01F','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013AGUFMGC42C..01F"><span>CO2 Sequestration within Spent Oil Shale</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Foster, H.; Worrall, F.; Gluyas, J.; Morgan, C.; Fraser, J.</p> <p>2013-12-01</p> <p>Worldwide deposits of oil shales are thought to represent ~3 trillion barrels of oil. Jordanian oil shale deposits are extensive and of high quality, and could represent 100 billion barrels of oil, leading to much interest and activity in the development of these deposits. The exploitation of oil shales has raised a number of environmental concerns including: land use, waste disposal, water consumption, and greenhouse gas emissions. The dry retorting of oil shales can overcome a number of the environmental impacts, but this leaves concerns over management of spent oil shale and CO2 production. In this study we propose that the spent oil shale can be used to sequester CO2 from the retorting process. Here we show that by conducting experiments using high pressure reaction facilities, we can achieve successful carbonation of spent oil shale. High pressure reactor facilities in the Department of Earth Sciences, Durham University, are capable of reacting solids with a range of fluids up to 15 MPa and 350°C, being specially designed for research with supercritical fluids. Jordanian spent oil shale was reacted with high pressure CO2 in order to assess whether there is potential for sequestration. Fresh and reacted materials were then examined by: Inductively Coupled Plasma Mass Spectrometry (ICP-MS), Thermogravimetric Analysis (TGA), X-Ray Fluorescence (XRF) and X-Ray Diffraction (XRD) methods. Jordanian spent oil shale was found to sequester up to 5.8 wt % CO2, on reacting under supercritical conditions, which is 90% of the theoretical carbonation. Jordanian spent oil shale is composed of a large proportion of CaCO3, which on retorting decomposes, forming CaSO4 and Ca-oxides which are the focus of carbonation reactions. A factorially designed experiment was used to test different factors on the extent of carbonation, including: pressure; temperature; duration; and the water content. Analysis of Variance (ANOVA) techniques were then used to determine the significance of each of these. Results show that the duration; temperature; pressure; and the interactions between these significantly affect the extent of carbonation. Reactions carried out for at least 4 hours show significantly more carbonation than those under supercritical conditions for 2 hours or less. However, reacting for 24 hours does not show a significant increase in the extent of reaction, indicating that the reaction has reached equilibrium within a few hours. Maximum carbonation occurred within 4 hours, at higher temperatures and pressures of 80°C and 100 bar although results also show that there is a significant amount of carbonation achieved within 30 minutes, at 40°C and 70 bar. The magnitude of the CO2 sequestration achieved was sufficient that it could lower CO2 emissions by up to 30 kg CO2 /bbl, thereby bringing the emissions from oil shale processing in line with those from conventional oil extraction methods. The determination of optimum conditions to allow for: maximum carbonation, oil recovery and sufficient calcination, is also of importance and is currently under investigation.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27457946','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27457946"><span>Deep ocean nutrients imply large latitudinal variation in particle transfer efficiency.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Weber, Thomas; Cram, Jacob A; Leung, Shirley W; DeVries, Timothy; Deutsch, Curtis</p> <p>2016-08-02</p> <p>The "transfer efficiency" of sinking organic particles through the mesopelagic zone and into the deep ocean is a critical determinant of the atmosphere-ocean partition of carbon dioxide (CO2). Our ability to detect large-scale spatial variations in transfer efficiency is limited by the scarcity and uncertainties of particle flux data. Here we reconstruct deep ocean particle fluxes by diagnosing the rate of nutrient accumulation along transport pathways in a data-constrained ocean circulation model. Combined with estimates of organic matter export from the surface, these diagnosed fluxes reveal a global pattern of transfer efficiency to 1,000 m that is high (∼25%) at high latitudes and low (∼5%) in subtropical gyres, with intermediate values in the tropics. This pattern is well correlated with spatial variations in phytoplankton community structure and the export of ballast minerals, which control the size and density of sinking particles. These findings accentuate the importance of high-latitude oceans in sequestering carbon over long timescales, and highlight potential impacts on remineralization depth as phytoplankton communities respond to a warming climate.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016GeoRL..43.4391H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016GeoRL..43.4391H"><span>Riverine dissolved lithium isotopic signatures in low-relief central Africa and their link to weathering regimes</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Henchiri, Soufian; Gaillardet, Jérôme; Dellinger, Mathieu; Bouchez, Julien; Spencer, Robert G. M.</p> <p>2016-05-01</p> <p>The isotopic composition of dissolved lithium (δ7Li) near the Congo River mouth varied from 14‰ to 22‰ in 2010 and was negatively correlated to discharge. From the relationship between dissolved δ7Li and strontium isotopes, we suggest that this large variation is due to mixing of waters from two contrasting continental weathering regimes. One end-member (high δ7Li ≈ 25‰) represents waters sourced from active lateritic soils covering the periphery of the basin (Li highly sequestered into secondary mineral products) and another representing blackwater rivers (low δ7Li ≈ 5.7‰) derived from the swampy central depression where high organic matter content in water leads to congruent dissolution of the Tertiary sedimentary bedrock. This suggests that the lithium isotopic signature of tropical low-relief surfaces is not unique and traces the long-term, large-scale vertical motions of the continental crust that control geomorphological settings. This evolution should be recorded in the oceanic secular δ7Li curve.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4978250','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4978250"><span>Deep ocean nutrients imply large latitudinal variation in particle transfer efficiency</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Weber, Thomas; Cram, Jacob A.; Leung, Shirley W.; DeVries, Timothy; Deutsch, Curtis</p> <p>2016-01-01</p> <p>The “transfer efficiency” of sinking organic particles through the mesopelagic zone and into the deep ocean is a critical determinant of the atmosphere−ocean partition of carbon dioxide (CO2). Our ability to detect large-scale spatial variations in transfer efficiency is limited by the scarcity and uncertainties of particle flux data. Here we reconstruct deep ocean particle fluxes by diagnosing the rate of nutrient accumulation along transport pathways in a data-constrained ocean circulation model. Combined with estimates of organic matter export from the surface, these diagnosed fluxes reveal a global pattern of transfer efficiency to 1,000 m that is high (∼25%) at high latitudes and low (∼5%) in subtropical gyres, with intermediate values in the tropics. This pattern is well correlated with spatial variations in phytoplankton community structure and the export of ballast minerals, which control the size and density of sinking particles. These findings accentuate the importance of high-latitude oceans in sequestering carbon over long timescales, and highlight potential impacts on remineralization depth as phytoplankton communities respond to a warming climate. PMID:27457946</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016PNAS..113.8606W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016PNAS..113.8606W"><span>Deep ocean nutrients imply large latitudinal variation in particle transfer efficiency</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Weber, Thomas; Cram, Jacob A.; Leung, Shirley W.; DeVries, Timothy; Deutsch, Curtis</p> <p>2016-08-01</p> <p>The “transfer efficiency” of sinking organic particles through the mesopelagic zone and into the deep ocean is a critical determinant of the atmosphere-ocean partition of carbon dioxide (CO2). Our ability to detect large-scale spatial variations in transfer efficiency is limited by the scarcity and uncertainties of particle flux data. Here we reconstruct deep ocean particle fluxes by diagnosing the rate of nutrient accumulation along transport pathways in a data-constrained ocean circulation model. Combined with estimates of organic matter export from the surface, these diagnosed fluxes reveal a global pattern of transfer efficiency to 1,000 m that is high (˜25%) at high latitudes and low (˜5%) in subtropical gyres, with intermediate values in the tropics. This pattern is well correlated with spatial variations in phytoplankton community structure and the export of ballast minerals, which control the size and density of sinking particles. These findings accentuate the importance of high-latitude oceans in sequestering carbon over long timescales, and highlight potential impacts on remineralization depth as phytoplankton communities respond to a warming climate.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017EGUGA..1916940M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017EGUGA..1916940M"><span>Influence of sustainable irrigation regimes and agricultural practices on the soil CO2 fluxes from olive groves in SE Spain</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Marañón-Jiménez, Sara; Serrano-Ortíz, Penelope; Vicente-Vicente, Jose Luis; Chamizo, Sonia; Kowalski, Andrew S.</p> <p>2017-04-01</p> <p>Olive (Olea europaea) is the dominant agriculture plantation in Spain and its main product, olive oil, is vital to the economy of Mediterranean countries. Given the extensive surface dedicated to olive plantations, olive groves can potentially sequester large amounts of carbon and contribute to mitigate climate change. Their potential for carbon sequestration will, however, largely depend on the management and irrigation practices in the olive grove. Although soil respiration is the main path of C release from the terrestrial ecosystems to the atmosphere and a suitable indicator of soil health and fertility, the interaction of agricultural management practices with irrigation regimes on soil CO2 fluxes have not been assessed yet. Here we investigate the influence of the presence of herbaceous cover, use of artificial fertilizers and their interaction with the irrigation regime on the CO2 emission from the soil to the atmosphere. For this, the three agricultural management treatments were established in replicated plots in an olive grove in the SE of Spain: presence of herbaceous cover ("H"), exclusion of herbaceous cover by using herbicides ("NH"), and exclusion of herbaceous cover along with addition of artificial fertilizers (0.55 kg m-2 year-1 of N, P, K solid fertilizer in the proportion 20:10:10, "NHF"). Within each management treatment, three irrigation regimes were also implemented in a randomized design: no-irrigation ("NO") or rain fed, full irrigation (224 l week-1 per olive tree, "MAX"), and a 50% restriction (112 l week-1 per olive tree, "MED"). Soil respiration was measured every 2-3 weeks at 1, 3, and 5 meters from each olive tree together with soil temperature and soil moisture in order to account for the spatial and seasonal variability over the year. Soil respiration was higher when herbaceous cover was present compared to the herbaceous exclusion, whereas the addition of fertilizer did not exert any significant effect. Although the different irrigation regimes did affect soil moisture, soil CO2 fluxes remained unaffected by the amount of water added. Soil moisture and temperature were actually reduced by the presence of herbaceous cover during the growing season, which suggests water competition between herbaceous plants and olives with counteracting effects on soil respiration values. Soil respiration showed high spatial heterogeneity, with values decreasing exponentially with the distance from the olive trees. These data highlight the need to account for their spatial and seasonal heterogeneity when estimating the contribution of soil respiration to atmospheric CO2 emissions and the crucial role of the agricultural management on determining the carbon sequestration potential of soil from olive groves.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=199964&Lab=NHEERL&keyword=Accounting+AND+measurement&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=199964&Lab=NHEERL&keyword=Accounting+AND+measurement&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Trading forest carbon - OSU</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Issues associate with trading carbon sequestered in forests are discussed. Scientific uncertainties associated with carbon measurement are discussed with respect to proposed accounting procedures. Major issues include: (1) Establishing baselines. (2) Determining additivity from f...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.congress.gov/bill/113th-congress/house-bill/699?q=%7B%22search%22%3A%5B%22%26%231103%22%5D%7D&r=18','SCIGOV-CON-113'); return false;" href="https://www.congress.gov/bill/113th-congress/house-bill/699?q=%7B%22search%22%3A%5B%22%26%231103%22%5D%7D&r=18"><span>Stop the Sequester Job Loss Now Act</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://thomas.loc.gov/home/LegislativeData.php?&n=BSS&c=113">THOMAS, 113th Congress </a></p> <p>Rep. Van Hollen, Chris [D-MD-8</p> <p>2013-02-14</p> <p>House - 03/01/2013 Referred to the Subcommittee on General Farm Commodities and Risk Management. (All Actions) Tracker: This bill has the status IntroducedHere are the steps for Status of Legislation:</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/874804','DOE-PATENT-XML'); return false;" href="https://www.osti.gov/servlets/purl/874804"><span>Methods and constructs for expression of foreign proteins in photosynthetic organisms</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/doepatents">DOEpatents</a></p> <p>Laible, Philip D.; Hanson, Deborah K.</p> <p>2002-01-01</p> <p>A method for expressing and purifying foreign proteins in photosynthetic organisms comprising the simultaneous expression of both the heterologous protein and a means for compartmentalizing or sequestering of the protein.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/1007474','DOE-PATENT-XML'); return false;" href="https://www.osti.gov/servlets/purl/1007474"><span>Situ formation of apatite for sequestering radionuclides and heavy metals</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/doepatents">DOEpatents</a></p> <p>Moore, Robert C.</p> <p>2003-07-15</p> <p>Methods for in situ formation in soil of a permeable reactive barrier or zone comprising a phosphate precipitate, such as apatite or hydroxyapatite, which is capable of selectively trapping and removing radionuclides and heavy metal contaminants from the soil, while allowing water or other compounds to pass through. A preparation of a phosphate reagent and a chelated calcium reagent is mixed aboveground and injected into the soil. Subsequently, the chelated calcium reagent biodegrades and slowly releases free calcium. The free calcium reacts with the phosphate reagent to form a phosphate precipitate. Under the proper chemical conditions, apatite or hydroxyapatite can form. Radionuclide and heavy metal contaminants, including lead, strontium, lanthanides, and uranium are then selectively sequestered by sorbing them onto the phosphate precipitate. A reducing agent can be added for reduction and selective sequestration of technetium or selenium contaminants.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/17663575','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/17663575"><span>On the predictability of protein database search complexity and its relevance to optimization of distributed searches.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Deciu, Cosmin; Sun, Jun; Wall, Mark A</p> <p>2007-09-01</p> <p>We discuss several aspects related to load balancing of database search jobs in a distributed computing environment, such as Linux cluster. Load balancing is a technique for making the most of multiple computational resources, which is particularly relevant in environments in which the usage of such resources is very high. The particular case of the Sequest program is considered here, but the general methodology should apply to any similar database search program. We show how the runtimes for Sequest searches of tandem mass spectral data can be predicted from profiles of previous representative searches, and how this information can be used for better load balancing of novel data. A well-known heuristic load balancing method is shown to be applicable to this problem, and its performance is analyzed for a variety of search parameters.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li class="active"><span>18</span></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_18 --> <div id="page_19" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li class="active"><span>19</span></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="361"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3538077','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3538077"><span>PNUTS functions as a proto-oncogene by sequestering PTEN</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Kavela, Sridhar; Shinde, Swapnil R; Ratheesh, Raman; Viswakalyan, Kotapalli; Bashyam, Murali D; Gowrishankar, Swarnalata; Vamsy, Mohana; Pattnaik, Sujit; Rao, Subramanyeshwar; Sastry, Regulagadda A; Srinivasulu, Mukta; Chen, Junjie; Maddika, Subbareddy</p> <p>2012-01-01</p> <p>PTEN is a well-defined tumor suppressor gene that antagonizes the PI3K/Akt pathway to regulate a multitude of cellular processes such as survival, growth, motility, invasiveness and angiogenesis. While the functions of PTEN have been studied extensively, the regulation of its activity during normal and disease conditions still remains incompletely understood. In this study, we identified the protein phosphatase-1 nuclear targeting subunit PNUTS (PPP1R10) as a PTEN associated protein. PNUTS directly interacted with the lipid-binding domain (C2 domain) of PTEN and sequestered it in the nucleus. Depletion of PNUTS leads to increased apoptosis and reduced cellular proliferation in a PTEN-dependent manner. PNUTS expression was elevated in certain cancers compared to matched normal tissues. Collectively, our studies reveal PNUTS as a novel PTEN regulator and a likely oncogene. PMID:23117887</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1855875','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1855875"><span>The Escherichia coli Regulator of Sigma 70 Protein, Rsd, Can Up-Regulate Some Stress-Dependent Promoters by Sequestering Sigma 70▿</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Mitchell, Jennie E.; Oshima, Taku; Piper, Sarah E.; Webster, Christine L.; Westblade, Lars F.; Karimova, Gouzel; Ladant, Daniel; Kolb, Annie; Hobman, Jon L.; Busby, Stephen J. W.; Lee, David J.</p> <p>2007-01-01</p> <p>The Escherichia coli Rsd protein forms complexes with the RNA polymerase σ70 factor, but its biological role is not understood. Transcriptome analysis shows that overexpression of Rsd causes increased expression from some promoters whose expression depends on the alternative σ38 factor, and this was confirmed by experiments with lac fusions at selected promoters. The LP18 substitution in Rsd increases the Rsd-dependent stimulation of these promoter-lac fusions. Analysis with a bacterial two-hybrid system shows that the LP18 substitution in Rsd increases its interaction with σ70. Our experiments support a model in which the role of Rsd is primarily to sequester σ70, thereby increasing the levels of RNA polymerase containing the alternative σ38 factor. PMID:17351046</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3810076','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3810076"><span>Proteinuria Impairs Podocyte Regeneration by Sequestering Retinoic Acid</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Peired, Anna; Angelotti, Maria Lucia; Ronconi, Elisa; la Marca, Giancarlo; Mazzinghi, Benedetta; Sisti, Alessandro; Lombardi, Duccio; Giocaliere, Elisa; Della Bona, Marialuisa; Villanelli, Fabio; Parente, Eliana; Ballerini, Lara; Sagrinati, Costanza; Wanner, Nicola; Huber, Tobias B.; Liapis, Helen; Lazzeri, Elena; Lasagni, Laura</p> <p>2013-01-01</p> <p>In CKD, the risk of kidney failure and death depends on the severity of proteinuria, which correlates with the extent of podocyte loss and glomerular scarring. We investigated whether proteinuria contributes directly to progressive glomerulosclerosis through the suppression of podocyte regeneration and found that individual components of proteinuria exert distinct effects on renal progenitor survival and differentiation toward a podocyte lineage. In particular, albumin prevented podocyte differentiation from human renal progenitors in vitro by sequestering retinoic acid, thus impairing retinoic acid response element (RARE)-mediated transcription of podocyte-specific genes. In mice with Adriamycin nephropathy, a model of human FSGS, blocking endogenous retinoic acid synthesis increased proteinuria and exacerbated glomerulosclerosis. This effect was related to a reduction in podocyte number, as validated through genetic podocyte labeling in NPHS2.Cre;mT/mG transgenic mice. In RARE-lacZ transgenic mice, albuminuria reduced retinoic acid bioavailability and impaired RARE activation in renal progenitors, inhibiting their differentiation into podocytes. Treatment with retinoic acid restored RARE activity and induced the expression of podocyte markers in renal progenitors, decreasing proteinuria and increasing podocyte number, as demonstrated in serial biopsy specimens. These results suggest that albumin loss through the damaged filtration barrier impairs podocyte regeneration by sequestering retinoic acid and promotes the generation of FSGS lesions. Our findings may explain why reducing proteinuria delays CKD progression and provide a biologic rationale for the clinical use of pharmacologic modulators to induce regression of glomerular diseases. PMID:23949798</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27992652','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27992652"><span>Molecular determination of kleptoplast origins from the sea slug Plakobranchus ocellatus (Sacoglossa, Gastropoda) reveals cryptic bryopsidalean (Chlorophyta) diversity in the Hawaiian Islands.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Wade, Rachael M; Sherwood, Alison R</p> <p>2017-06-01</p> <p>The sacoglossan sea slug species complex Plakobranchus ocellatus is a common algivore throughout the tropical Pacific, including the Hawaiian Islands. Plakobranchus ocellatus is kleptoplastic-it sequesters and retains algal chloroplasts-a characteristic that can be exploited to molecularly characterize diminutive bryopsidalean algae that are typically difficult to locate, collect, and identify. Previous DNA barcode analyses of both P. ocellatus and its kleptoplasts have been conducted primarily in the western Pacific and have only minimally sampled the most eastern populations in the Hawaiian Islands. Using two chloroplast markers, rbcL and tufA, kleptoplast samples from an Oahu population of P. ocellatus were amplified and cloned to identify their algal sources. Plakobranchus ocellatus sequester chloroplasts from up to 11 bryopsidalean algal species, all but one being diminutive in thallus size. Notably, eight of the detected algal species were new records to the Hawaiian Islands. A sequestration preference study demonstrated that the O'ahu population of P. ocellatus preferentially sequesters chloroplasts from diminutive, epilithic taxa. Using coxI barcoding of P. ocellatus, we showed the O'ahu population to be part of a clade that includes sequences from the neighboring island Maui, Australia, and the Philippines. The use of P. ocellatus as a novel sampling tool allows the exploration of the green algal community diversity and composition at a fine scale. © 2016 Phycological Society of America.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22053874','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22053874"><span>Two small RNAs, CrcY and CrcZ, act in concert to sequester the Crc global regulator in Pseudomonas putida, modulating catabolite repression.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Moreno, Renata; Fonseca, Pilar; Rojo, Fernando</p> <p>2012-01-01</p> <p>The Crc protein is a translational repressor that recognizes a specific target at some mRNAs, controlling catabolite repression and co-ordinating carbon metabolism in pseudomonads. In Pseudomonas aeruginosa, the levels of free Crc protein are controlled by CrcZ, a sRNA that sequesters Crc, acting as an antagonist. We show that, in Pseudomonas putida, the levels of free Crc are controlled by CrcZ and by a novel 368 nt sRNA named CrcY. CrcZ and CrcY, which contain six potential targets for Crc, were able to bind Crc specifically in vitro. The levels of CrcZ and CrcY were low under conditions generating a strong catabolite repression, and increased strongly when catabolite repression was absent. Deletion of either crcZ or crcY had no effect on catabolite repression, but the simultaneous absence of both sRNAs led to constitutive catabolite repression that compromised growth on some carbon sources. Overproduction of CrcZ or CrcY significantly reduced repression. We propose that CrcZ and CrcY act in concert, sequestering and modulating the levels of free Crc according to metabolic conditions. The CbrA/CbrB two-component system activated crcZ transcription, but had little effect on crcY. CrcY was detected in P. putida, Pseudomonas fluorescens and Pseudomonas syringae, but not in P. aeruginosa. © 2011 Blackwell Publishing Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29421555','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29421555"><span>Synthetic design of growth factor sequestering extracellular matrix mimetic hydrogel for promoting in vivo bone formation.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Yan, Hong Ji; Casalini, Tommaso; Hulsart-Billström, Gry; Wang, Shujiang; Oommen, Oommen P; Salvalaglio, Matteo; Larsson, Sune; Hilborn, Jöns; Varghese, Oommen P</p> <p>2018-04-01</p> <p>Synthetic scaffolds that possess an intrinsic capability to protect and sequester sensitive growth factors is a primary requisite for developing successful tissue engineering strategies. Growth factors such as recombinant human bone morphogenetic protein-2 (rhBMP-2) is highly susceptible to premature degradation and to provide a meaningful clinical outcome require high doses that can cause serious side effects. We discovered a unique strategy to stabilize and sequester rhBMP-2 by enhancing its molecular interactions with hyaluronic acid (HA), an extracellular matrix (ECM) component. We found that by tuning the initial protonation state of carboxylic acid residues of HA in a covalently crosslinked hydrogel modulate BMP-2 release at physiological pH by minimizing the electrostatic repulsion and maximizing the Van der Waals interactions. At neutral pH, BMP-2 release is primarily governed by Fickian diffusion, whereas at acidic pH both diffusion and electrostatic interactions between HA and BMP-2 become important as confirmed by molecular dynamics simulations. Our results were also validated in an in vivo rat ectopic model with rhBMP-2 loaded hydrogels, which demonstrated superior bone formation with acidic hydrogel as compared to the neutral counterpart. We believe this study provides new insight on growth factor stabilization and highlights the therapeutic potential of engineered matrices for rhBMP-2 delivery and may help to curtail the adverse side effects associated with the high dose of the growth factor. Copyright © 2018 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70115187','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70115187"><span>Quantifying biomineralization of zinc in the Rio Naracauli (Sardinia, Italy), using a tracer injection and synoptic sampling</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>De Giudici, Giovanni; Wanty, Richard B.; Podda, F.; Kimball, Briant A.; Verplanck, Philip L.; Lattanzi, P.; Cidu, R.; Medas, D.</p> <p>2014-01-01</p> <p>Streams draining mined areas throughout the world commonly have high concentrations of Zn. Because Zn is not easily removed from stream water and because it can be toxic to aquatic organisms, its presence is a persistent problem. The discovery of biomineralization of Zn-bearing solids in the mine drainage of Rio Naracauli, in Sardinia, Italy, provides insights into strategies for removing Zn and improving water quality in streams affected by mine drainage. Until now, the transport and attenuation of Zn has not been quantified in this stream setting. A continuous tracer injection experiment was conducted to quantify the biomineralization process and to identify the loading of constituents that causes a change from precipitation of hydrozincite [Zn5(CO3)2(OH)6] in the upstream reach to precipitation of a Zn-silicate phase downstream. Based on the mass-load calculations derived from the tracer experiment, about 1.2 kg/day of Zn is sequestered in hydrozincite. This biomineralization represents nearly 90% removal of Zn. Other elements such as Pb and Cd also are sequestered, either in the hydrozincite, or in a separate phase that forms simultaneously. In the lower 600 m of the stream, where the Zn-silicate forms, as much as 0.7 kg/day Zn are sequestered in this solid, but additions of Zn to the stream from groundwater discharge lead to an overall increase in load in that portion of the Rio Naracauli.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27940269','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27940269"><span>Hydrogen sulfide alleviates mercury toxicity by sequestering it in roots or regulating reactive oxygen species productions in rice seedlings.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Chen, Zhen; Chen, Moshun; Jiang, Ming</p> <p>2017-02-01</p> <p>Soil mercury (Hg) contamination is a major factor that affects agricultural yield and food security. Hydrogen sulfide (H 2 S) plays multifunctional roles in mediating a variety of responses to abiotic stresses. The effects of exogenous H 2 S on rice (Oryza sativa var 'Nipponbare') growth and metabolism under mercuric chloride (HgCl 2 ) stress were investigated in this study. Either 100 or 200 μM sodium hydrosulfide (NaHS, a donor of H 2 S) pretreatment improved the transcription of bZIP60, a membrane-associated transcription factor, and then enhanced the expressions of non-protein thiols (NPT) and metallothioneins (OsMT-1) to sequester Hg in roots and thus inhibit Hg transport to shoots. Meanwhile, H 2 S promoted seedlings growth significantly even in the presences of Hg and superoxide dismutase (SOD, EC 1.15.1.1) or catalase (CAT, EC 1.11.1.6) inhibitors, diethyldithiocarbamate (DDC) or 3-amino-1,2,4-triazole (AT). H 2 S might act as an antioxidant to inhibit or scavenge reactive oxygen species (ROS) productions for maintaining the lower MDA and H 2 O 2 levels, and thereby preventing oxidative damages. All these results indicated H 2 S effectively alleviated Hg toxicity by sequestering it in roots or by regulating ROS in seedlings and then thus significantly promoted rice growth. Copyright © 2016 Elsevier Masson SAS. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014NW....101..707V','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014NW....101..707V"><span>Development of a generalist predator, Podisus maculiventris, on glucosinolate sequestering and nonsequestering prey</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>van Geem, Moniek; Harvey, Jeffrey A.; Gols, Rieta</p> <p>2014-09-01</p> <p>Insect herbivores exhibit various strategies to counter the toxic effects of plant chemical defenses. These strategies include the detoxification, excretion, and sequestration of plant secondary metabolites. The latter strategy is often considered to provide an additional benefit in that it provides herbivores with protection against natural enemies such as predators. Profiles of sequestered chemicals are influenced by the food plants from which these chemicals are derived. We compared the effects of sequestration and nonsequestration of plant secondary metabolites in two specialist herbivores on the development of a generalist predator, Podisus maculiventris. Profiles of glucosinolates, secondary metabolites characteristic for the Brassicaceae, are known to differ considerably both inter- and intraspecifically. Throughout their immature (=nymphal) development, the predator was fed on larval stages of either sequestering (turnip sawfly, Athalia rosae) or nonsequestering (small cabbage white butterfly, Pieris rapae) prey that in turn had been feeding on plants originating from three wild cabbage ( Brassica oleracea) populations that have previously been shown to differ in their glucosinolate profiles. We compared survival, development time, and adult body mass as parameters for bug performance. Our results show that sequestration of glucosinolates by A. rosae only marginally affected the development of P. maculiventris. The effects of plant population on predator performance were variable. We suggest that sequestration of glucosinolates by A. rosae functions not only as a defensive mechanism against some predators, but may also be an alternative way of harmlessly dealing with plant allelochemicals.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2002GBioC..16.1143C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2002GBioC..16.1143C"><span>Potential soil carbon sequestration in overgrazed grassland ecosystems</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Conant, Richard T.; Paustian, Keith</p> <p>2002-12-01</p> <p>Excessive grazing pressure is detrimental to plant productivity and may lead to declines in soil organic matter. Soil organic matter is an important source of plant nutrients and can enhance soil aggregation, limit soil erosion, and can also increase cation exchange and water holding capacities, and is, therefore, a key regulator of grassland ecosystem processes. Changes in grassland management which reverse the process of declining productivity can potentially lead to increased soil C. Thus, rehabilitation of areas degraded by overgrazing can potentially sequester atmospheric C. We compiled data from the literature to evaluate the influence of grazing intensity on soil C. Based on data contained within these studies, we ascertained a positive linear relationship between potential C sequestration and mean annual precipitation which we extrapolated to estimate global C sequestration potential with rehabilitation of overgrazed grassland. The GLASOD and IGBP DISCover data sets were integrated to generate a map of overgrazed grassland area for each of four severity classes on each continent. Our regression model predicted losses of soil C with decreased grazing intensity in drier areas (precipitation less than 333 mm yr-1), but substantial sequestration in wetter areas. Most (93%) C sequestration potential occurred in areas with MAP less than 1800 mm. Universal rehabilitation of overgrazed grasslands can sequester approximately 45 Tg C yr-1, most of which can be achieved simply by cessation of overgrazing and implementation of moderate grazing intensity. Institutional level investments by governments may be required to sequester additional C.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3462642','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3462642"><span>Ribulose-1,5-Bis-Phosphate Carboxylase/Oxygenase Accumulation Factor1 Is Required for Holoenzyme Assembly in Maize[C][W</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Feiz, Leila; Williams-Carrier, Rosalind; Wostrikoff, Katia; Belcher, Susan; Barkan, Alice; Stern, David B.</p> <p>2012-01-01</p> <p>Most life is ultimately sustained by photosynthesis and its rate-limiting carbon fixing enzyme, ribulose-1,5-bis-phosphate carboxylase/oxygenase (Rubisco). Although the structurally comparable cyanobacterial Rubisco is amenable to in vitro assembly, the higher plant enzyme has been refractory to such manipulation due to poor understanding of its assembly pathway. Here, we report the identification of a chloroplast protein required for Rubisco accumulation in maize (Zea mays), RUBISCO ACCUMULATION FACTOR1 (RAF1), which lacks any characterized functional domains. Maize lines lacking RAF1 due to Mutator transposon insertions are Rubisco deficient and seedling lethal. Analysis of transcripts and proteins showed that Rubisco large subunit synthesis in raf1 plants is not compromised; however, newly synthesized Rubisco large subunit appears in a high molecular weight form whose accumulation requires a specific chaperonin 60 isoform. Gel filtration analysis and blue native gels showed that endogenous and recombinant RAF1 are trimeric; however, following in vivo cross-linking, RAF1 copurifies with Rubisco large subunit, suggesting that they interact weakly or transiently. RAF1 is predominantly expressed in bundle sheath chloroplasts, consistent with a Rubisco accumulation function. Our results support the hypothesis that RAF1 acts during Rubisco assembly by releasing and/or sequestering the large subunit from chaperonins early in the assembly process. PMID:22942379</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://eric.ed.gov/?q=biological+AND+networks&id=ED558281','ERIC'); return false;" href="https://eric.ed.gov/?q=biological+AND+networks&id=ED558281"><span>Querying Large Biological Network Datasets</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.eric.ed.gov/ERICWebPortal/search/extended.jsp?_pageLabel=advanced">ERIC Educational Resources Information Center</a></p> <p>Gulsoy, Gunhan</p> <p>2013-01-01</p> <p>New experimental methods has resulted in increasing amount of genetic interaction data to be generated every day. Biological networks are used to store genetic interaction data gathered. Increasing amount of data available requires fast large scale analysis methods. Therefore, we address the problem of querying large biological network datasets.…</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFM.B41F2036W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFM.B41F2036W"><span>Greater soil carbon accumulation in deeper soils in native- than in exotic-dominated grassland plantings in the southern Plains</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Wilsey, B. J.; Xu, X.; Polley, H. W.; Hofmockel, K. S.</p> <p>2017-12-01</p> <p>Global change includes invasion by non-native plant species, and invasion may affect carbon cycling and storage. We tested predictions in central Texas in an experiment that compares mixtures of all exotic or all native species under two summer irrigation treatments (128 or 0 mm) that varies the amount of summer drought stress. At the end of the eighth growing season after establishment, soils were sampled in 10 cm increments to 100 cm depth to determine if soil C differed among treatments, and if treatments differentially affected soil C in deeper soils. Soil C content was significantly (5%) higher under native plantings than under exotic species plantings (P < 0.001). The difference between native and exotic plantings increased with depth, and native plantings had higher soil C in deeper soil layers than in surface layers (native-exotic x depth, P < 0.001). Exotic plantings had decreasing soil C with depth. Soil C:N ratio and δ13C/12C were also significantly affected by native-exotic status, with soils in exotic plots having a significantly greater C4 contribution than native soils. Soil C was unaffected by summer irrigation treatments. Our results suggest that a significant amount of carbon could be sequestered by replacing exotic plant species with native species in the southern Plains, and that more work should be conducted at deeper soil depths. If we had restricted our analyses to surface soil layers (e.g. top 30 cm), we would have failed to detect depth differences between natives and exotics.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/17695916','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/17695916"><span>Ocean sequestration of carbon dioxide: modeling the deep ocean release of a dense emulsion of liquid Co2-in-water stabilized by pulverized limestone particles.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Golomb, D; Pennell, S; Ryan, D; Barry, E; Swett, P</p> <p>2007-07-01</p> <p>The release into the deep ocean of an emulsion of liquid carbon dioxide-in-seawater stabilized by fine particles of pulverized limestone (CaCO3) is modeled. The emulsion is denser than seawater, hence, it will sink deeper from the injection point, increasing the sequestration period. Also, the presence of CaCO3 will partially buffer the carbonic acid that results when the emulsion eventually disintegrates. The distance that the plume sinks depends on the density stratification of the ocean, the amount of the released emulsion, and the entrainment factor. When released into the open ocean, a plume containing the CO2 output of a 1000 MW(el) coal-fired power plant will typically sink hundreds of meters below the injection point. When released from a pipe into a valley on the continental shelf, the plume will sink about twice as far because of the limited entrainment of ambient seawater when the plume flows along the valley. A practical system is described involving a static mixer for the in situ creation of the CO2/seawater/pulverized limestone emulsion. The creation of the emulsion requires significant amounts of pulverized limestone, on the order of 0.5 tons per ton of liquid CO2. That increases the cost of ocean sequestration by about $13/ ton of CO2 sequestered. However, the additional cost may be compensated by the savings in transportation costs to greater depth, and because the release of an emulsion will not acidify the seawater around the release point.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUFM.B13A0555M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUFM.B13A0555M"><span>Assessing the Extent and Density of Seagrass Meadows in Pacific Rim National Park Reserve and Clayoquot Sound on the Pacific Coast of Canada</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>McGowan, A. E.; Postlethwaite, V. R.; Pellatt, M. G.; Kohfeld, K. E.; Robinson, C.; Yakimishyn, J.; Chastain, S. G.</p> <p>2016-12-01</p> <p>Across the globe seagrass habits are recognized as highly productive systems, and have recently been characterized by their ability to store and sequester substantial amounts of organic carbon, known as `blue carbon.' Unfortunately, seagrasses are among the most rapidly disappearing ecosystems on Earth due to anthropogenic activities and development. Given the paucity of geospatial information on the global abundance of blue carbon environments, the rate of seagrass habitat loss is uncertain. Recent studies indicate that the consequences of coastal ecosystem conversion are larger than predicted, particularly on Canada's Pacific coastline where agricultural, forestry, and commercial developments have destroyed substantial amounts of seagrass habitat. This lack of knowledge hinders coastal habitat and blue carbon conservation planning and inhibits comprehensive policy development regarding coastal carbon management. This research quantitatively assesses various measures of above and below ground biomass and eelgrass shoot density as well as incorporates geospatial data collected from remote sensing technologies from three seagrass meadows on the Pacific coast of British Columbia. Using ArcGIS software, the distribution, extent, and density of seagrass located in the Pacific Rim National Park Reserve and southern Clayoquot Sound will be used to contribute to the first set of continental maps of blue carbon habitats within North America led by the Commission for Environmental Cooperation. Further, these results will be integrated into a geospatial database on the carbon accumulation rates in seagrass meadows on the Pacific coast of North America, providing a baseline for determining the role blue carbon habitats play in carbon mitigation on coastal British Columbia.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014SPIE.9246E..05L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014SPIE.9246E..05L"><span>Satellite assisted aerosol correlation in a sequestered CO2 leakage controlled site</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Landulfo, Eduardo; da Silva Lopes, Fábio J.; Nakaema, Walter M.; de Medeiros, José A. G.; Moreira, Andrea</p> <p>2014-10-01</p> <p>Currently one of the main challenges in CO2 storage research is to grant the development, testing and validation of accurate and efficient Measuring, Monitoring and Verification (MMV) techniques to be deployed at the final storage site, targeting maximum storage efficiency at the minimal leakage risk levels. For such task a mimetic sequestration site has been deployed in Florianopolis, Brazil, in order to verify the performance of monitoring plataforms to detect and quantify leakages of ground injected CO2, namely a Cavity Ring Down System (CRDS) - Los Gatos Research - an Eddy Covariance System (Campbell Scientific and Irgason) and meteorological tower for wind, humidity, precipitation and temperature monitoring onsite. The measurement strategy for detecting CO2 leakages can be very challenging since environmental and phytogenic influence can be very severe and play a role on determining if the values measured are unambiguous or not. One external factor to be considered is the amount of incoming solar radiation which will be the driving force for the whole experimental setup and following this reasoning the amount of aerosols in the atmospheric column can be a determinant factor influencing the experimental results. Thus the investigation of measured fluxes CO2 and its concentration with the aforementioned experimental instruments and their correlation with the aerosol data should be taken into account by means of satellite borne systems dedicated to measure aerosol vertical distribution and its optical properties, in this study we have selected CALIPSO and MODIS instrumentation to help on deriving the aerosol properties and CO2 measurements.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/1157567','DOE-PATENT-XML'); return false;" href="https://www.osti.gov/servlets/purl/1157567"><span>Magnetic mesoporous material for the sequestration of algae</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/doepatents">DOEpatents</a></p> <p>Trewyn, Brian G.; Kandel, Kapil; Slowing, Igor Ivan; Lee, Show-Ling</p> <p>2014-09-09</p> <p>The present invention provides a magnetic mesoporous nanoparticle that includes a mesoporous silicate nanoparticle and iron oxide. The present invention also provides a method of using magnetic mesoporous nanoparticles to sequester microorganisms from a media.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.osti.gov/sciencecinema/biblio/1248036','SCIGOVIMAGE-SCICINEMA'); return false;" href="http://www.osti.gov/sciencecinema/biblio/1248036"><span>In Situ Formation of Calcium Apatite in Soil for Sequestering Contaminants in Soil and Groundwater</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/sciencecinema/">ScienceCinema</a></p> <p>Moore, Robert; Szecsody, Jim; Thompson, Mike</p> <p>2018-01-16</p> <p>A new method for in situ formation of a calcium apatite permeable reactive barrier that is a groundbreaking technology for containing radioactive/heavy metal contaminants threatening groundwater supplies.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.congress.gov/bill/112th-congress/house-bill/5652?q=%7B%22search%22%3A%5B%22High+AND+Frequency+AND+Space+AND+Communication%22%5D%7D&r=41','CONGRESS-112'); return false;" href="https://www.congress.gov/bill/112th-congress/house-bill/5652?q=%7B%22search%22%3A%5B%22High+AND+Frequency+AND+Space+AND+Communication%22%5D%7D&r=41"><span>Sequester Replacement Reconciliation Act of 2012</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://thomas.loc.gov/home/LegislativeData.php?&n=BSS&c=112">THOMAS, 112th Congress</a></p> <p>Rep. Ryan, Paul [R-WI-1</p> <p>2012-05-09</p> <p>Senate - 05/15/2012 Read the second time. Placed on Senate Legislative Calendar under General Orders. Calendar No. 398. (All Actions) Tracker: This bill has the status Passed HouseHere are the steps for Status of Legislation:</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/1248036','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/1248036"><span>In Situ Formation of Calcium Apatite in Soil for Sequestering Contaminants in Soil and Groundwater</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Moore, Robert; Szecsody, Jim; Thompson, Mike</p> <p>2015-10-20</p> <p>A new method for in situ formation of a calcium apatite permeable reactive barrier that is a groundbreaking technology for containing radioactive/heavy metal contaminants threatening groundwater supplies.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li class="active"><span>19</span></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_19 --> <div id="page_20" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li class="active"><span>20</span></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="381"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28900142','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28900142"><span>Earth system feedback statistically extracted from the Indian Ocean deep-sea sediments recording Eocene hyperthermals.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Yasukawa, Kazutaka; Nakamura, Kentaro; Fujinaga, Koichiro; Ikehara, Minoru; Kato, Yasuhiro</p> <p>2017-09-12</p> <p>Multiple transient global warming events occurred during the early Palaeogene. Although these events, called hyperthermals, have been reported from around the globe, geologic records for the Indian Ocean are limited. In addition, the recovery processes from relatively modest hyperthermals are less constrained than those from the severest and well-studied hothouse called the Palaeocene-Eocene Thermal Maximum. In this study, we constructed a new and high-resolution geochemical dataset of deep-sea sediments clearly recording multiple Eocene hyperthermals in the Indian Ocean. We then statistically analysed the high-dimensional data matrix and extracted independent components corresponding to the biogeochemical responses to the hyperthermals. The productivity feedback commonly controls and efficiently sequesters the excess carbon in the recovery phases of the hyperthermals via an enhanced biological pump, regardless of the magnitude of the events. Meanwhile, this negative feedback is independent of nannoplankton assemblage changes generally recognised in relatively large environmental perturbations.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4851848','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4851848"><span>Plankton networks driving carbon export in the oligotrophic ocean</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Larhlimi, Abdelhalim; Roux, Simon; Darzi, Youssef; Audic, Stephane; Berline, Léo; Brum, Jennifer; Coelho, Luis Pedro; Espinoza, Julio Cesar Ignacio; Malviya, Shruti; Sunagawa, Shinichi; Dimier, Céline; Kandels-Lewis, Stefanie; Picheral, Marc; Poulain, Julie; Searson, Sarah; Stemmann, Lars; Not, Fabrice; Hingamp, Pascal; Speich, Sabrina; Follows, Mick; Karp-Boss, Lee; Boss, Emmanuel; Ogata, Hiroyuki; Pesant, Stephane; Weissenbach, Jean; Wincker, Patrick; Acinas, Silvia G.; Bork, Peer; de Vargas, Colomban; Iudicone, Daniele; Sullivan, Matthew B.; Raes, Jeroen; Karsenti, Eric; Bowler, Chris; Gorsky, Gabriel</p> <p>2015-01-01</p> <p>The biological carbon pump is the process by which CO2 is transformed to organic carbon via photosynthesis, exported through sinking particles, and finally sequestered in the deep ocean. While the intensity of the pump correlates with plankton community composition, the underlying ecosystem structure driving the process remains largely uncharacterised. Here we use environmental and metagenomic data gathered during the Tara Oceans expedition to improve our understanding of carbon export in the oligotrophic ocean. We show that specific plankton communities, from the surface and deep chlorophyll maximum, correlate with carbon export at 150 m and highlight unexpected taxa such as Radiolaria, alveolate parasites, as well as Synechococcus and their phages, as lineages most strongly associated with carbon export in the subtropical, nutrient-depleted, oligotrophic ocean. Additionally, we show that the relative abundance of just a few bacterial and viral genes can predict most of the variability in carbon export in these regions. PMID:26863193</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/914013-structures-polymorphic-interactions-two-heptad-repeat-regions-sars-virus-s2-protein','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/914013-structures-polymorphic-interactions-two-heptad-repeat-regions-sars-virus-s2-protein"><span></span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Deng,Y.; Liu, J.; Zheng, Q.</p> <p></p> <p>Entry of SARS coronavirus into its target cell requires large-scale structural transitions in the viral spike (S) glycoprotein in order to induce fusion of the virus and cell membranes. Here we describe the identification and crystal structures of four distinct a-helical domains derived from the highly conserved heptad-repeat (HR) regions of the S2 fusion subunit. The four domains are an antiparallel four-stranded coiled coil, a parallel trimeric coiled coil, a four-helix bundle, and a six-helix bundle that is likely the final fusogenic form of the protein. When considered together, the structural and thermodynamic features of the four domains suggest amore » possible mechanism whereby the HR regions, initially sequestered in the native S glycoprotein spike, are released and refold sequentially to promote membrane fusion. Our results provide a structural framework for understanding the control of membrane fusion and should guide efforts to intervene in the SARS coronavirus entry process.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/1225180','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/1225180"><span>Literature review for oxalate oxidation processes and plutonium oxalate solubility</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Nash, C. A.</p> <p>2015-10-01</p> <p>A literature review of oxalate oxidation processes finds that manganese(II)-catalyzed nitric acid oxidation of oxalate in precipitate filtrate is a viable and well-documented process. The process has been operated on the large scale at Savannah River in the past, including oxidation of 20 tons of oxalic acid in F-Canyon. Research data under a variety of conditions show the process to be robust. This process is recommended for oxalate destruction in H-Canyon in the upcoming program to produce feed for the MOX facility. Prevention of plutonium oxalate precipitation in filtrate can be achieved by concentrated nitric acid/ferric nitrate sequestration of oxalate.more » Organic complexants do not appear practical to sequester plutonium. Testing is proposed to confirm the literature and calculation findings of this review at projected operating conditions for the upcoming campaign.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016Natur.532..465.','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016Natur.532..465."><span>Plankton networks driving carbon export in the oligotrophic ocean</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p></p> <p>2016-04-01</p> <p>The biological carbon pump is the process by which CO2 is transformed to organic carbon via photosynthesis, exported through sinking particles, and finally sequestered in the deep ocean. While the intensity of the pump correlates with plankton community composition, the underlying ecosystem structure driving the process remains largely uncharacterized. Here we use environmental and metagenomic data gathered during the Tara Oceans expedition to improve our understanding of carbon export in the oligotrophic ocean. We show that specific plankton communities, from the surface and deep chlorophyll maximum, correlate with carbon export at 150 m and highlight unexpected taxa such as Radiolaria and alveolate parasites, as well as Synechococcus and their phages, as lineages most strongly associated with carbon export in the subtropical, nutrient-depleted, oligotrophic ocean. Additionally, we show that the relative abundance of a few bacterial and viral genes can predict a significant fraction of the variability in carbon export in these regions.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2010AGUFM.B24A..06S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2010AGUFM.B24A..06S"><span>Organic Carbon Burial in Brazilian Mangrove Sediments (Invited)</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Sanders, C.; Smoak, J. M.; Sanders, L.; Patchineelam, S.</p> <p>2010-12-01</p> <p>This study reviews the organic carbon (OC) burial rates in mangrove forests, margins and mud flats in geographically distinct areas of the Brazilian coastline. We exam the burial rates, taking into account the geomorphology of each region. Our initial results indicate that the Northeastern region of Brazil is sequestering significantly more OC than in the Southeastern areas, being that the mass sediment accumulation rates remained consistent within the forests as opposed to large variations found in the mudflats. The other pertinent factor was OC content, which differed substantially in respect to region. Given that the mangrove forests of the Southeastern regions of Brazil may be more susceptible to a rising sea level, as these areas are constricted by vast mountain ranges, this work attempts to put in perspective the possible impacts of climate change on mangrove ecosystems and OC burial along the Brazilian coastal ocean. We also compare our result to global averages.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29866805','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29866805"><span>RsmV a small non-coding regulatory RNA in Pseudomonas aeruginosa that sequesters RsmA and RsmF from target mRNAs.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Janssen, Kayley H; Diaz, Manisha R; Gode, Cindy J; Wolfgang, Matthew C; Yahr, Timothy L</p> <p>2018-06-04</p> <p>The Gram-negative opportunistic pathogen Pseudomonas aeruginosa has distinct genetic programs that favor either acute or chronic virulence gene expression. Acute virulence is associated with twitching and swimming motility, expression of a type III secretion system (T3SS), and the absence of alginate, Psl, or Pel polysaccharide production. Traits associated with chronic infection include growth as a biofilm, reduced motility, and expression of a type VI secretion system (T6SS). The Rsm post-transcriptional regulatory system plays important roles in the inverse control of phenotypes associated with acute and chronic virulence. RsmA and RsmF are RNA-binding proteins that interact with target mRNAs to control gene expression at the post-transcriptional level. Previous work found that RsmA activity is controlled by at least three small, non-coding regulatory RNAs (RsmW, RsmY, and RsmZ). In this study, we took an in-silico approach to identify additional sRNAs that might function in the sequestration of RsmA and/or RsmF and identified RsmV, a 192 nt transcript with four predicted RsmA/RsmF consensus binding sites. RsmV is capable of sequestering RsmA and RsmF in vivo to activate translation of tssA1 , a component of the T6SS, and to inhibit T3SS gene expression. Each of the predicted RsmA/RsmF consensus binding sites contribute to RsmV activity. Electrophoretic mobility shifts assays show that RsmF binds RsmV with >10-fold higher affinity than RsmY and RsmZ. Gene expression studies revealed that the temporal expression pattern of RsmV differs from RsmW, RsmY, and RsmZ. These findings suggest that each sRNA may play distinct roles in controlling RsmA and RsmF activity. IMPORTANCE The CsrA/RsmA family of RNA-binding proteins play important roles in post-transcriptional control of gene expression. The activity of CsrA/RsmA proteins is controlled by small non-coding RNAs that function as decoys to sequester CsrA/RsmA from target mRNAs. Pseudomonas aeruginosa has two CsrA family proteins (RsmA and RsmF) and at least four sequestering sRNAs (RsmV [identified in this study], RsmW, RsmY, RsmZ) that control RsmA/RsmF activity. RsmY and RsmZ are the primary sRNAs that sequester RsmA/RsmF, and RsmV and RsmW appear to play smaller roles. Differences in the temporal expression and absolute levels of the sRNAs and in their binding affinities for RsmA/RsmF may provide a mechanism of fine-tuning the output of the Rsm system in response to environmental cues. Copyright © 2018 American Society for Microbiology.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23947074','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23947074"><span>[Preliminary assessment of the potential of biochar technology in mitigating the greenhouse effect in China].</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Jiang, Zhi-Xiang; Zheng, Hao; Li, Feng-Min; Wang, Zhen-Yu</p> <p>2013-06-01</p> <p>The production of biochar by pyrolysis and its application to soil can sequester the CO2 which was absorbed by plants from atmosphere into soil, in addition it can also bring multiple benefits for agriculture production. On the basis of the available potential survey of the biomass residues from agriculture and forestry section, life cycle assessment was employed to quantify the potential of biochar technology in mitigation of greenhouse gases in our country. The results showed: In China, the amount of available biomass resource was 6.04 x 10(8) t every year and its net greenhouse effect potential was 5.32 x 10(8) t CO(2e) (CO(2e): CO2 equivalent), which was equivalent to 0.88 t CO(2e) for every ton biomass. The greatest of contributor to the total potential was plant carbon sequestration in soil as the form of biochar which accounts for 73.94%, followed by production of renewable energy and its percentage was 23.85%. In summary, production of biochar from agriculture and forestry biomass residues had a significant potential for our country to struggle with the pressure of greenhouse gas emission.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28924176','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28924176"><span>Low carbon renewable natural gas production from coalbeds and implications for carbon capture and storage.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Huang, Zaixing; Sednek, Christine; Urynowicz, Michael A; Guo, Hongguang; Wang, Qiurong; Fallgren, Paul; Jin, Song; Jin, Yan; Igwe, Uche; Li, Shengpin</p> <p>2017-09-18</p> <p>Isotopic studies have shown that many of the world's coalbed natural gas plays are secondary biogenic in origin, suggesting a potential for gas regeneration through enhanced microbial activities. The generation of biogas through biostimulation and bioaugmentation is limited to the bioavailability of coal-derived compounds and is considered carbon positive. Here we show that plant-derived carbohydrates can be used as alternative substrates for gas generation by the indigenous coal seam microorganisms. The results suggest that coalbeds can act as natural geobioreactors to produce low carbon renewable natural gas, which can be considered carbon neutral, or perhaps even carbon negative depending on the amount of carbon sequestered within the coal. In addition, coal bioavailability is no longer a limiting factor. This approach has the potential of bridging the gap between fossil fuels and renewable energy by utilizing existing coalbed natural gas infrastructure to produce low carbon renewable natural gas and reducing global warming.Coalbeds produce natural gas, which has been observed to be enhanced by in situ microbes. Here, the authors add plant-derived carbohydrates (monosaccharides) to coal seams to be converted by indigenous microbes into natural gas, thus demonstrating a potential low carbon renewable natural gas resource.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012HMR....66..635L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012HMR....66..635L"><span>Vertical distribution of the prokaryotic cell size in the Mediterranean Sea</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>La Ferla, R.; Maimone, G.; Azzaro, M.; Conversano, F.; Brunet, C.; Cabral, A. S.; Paranhos, R.</p> <p>2012-12-01</p> <p>Distributions of prokaryotic cell size and morphology were studied in different areas of the Mediterranean Sea by using image analysis on samples collected from surface down to bathypelagic layers (max depth 4,900 m) in the Southern Tyrrhenian, Southern Adriatic and Eastern Mediterranean Seas. Distribution of cell size of prokaryotes in marine ecosystem is very often not considered, which makes our study first in the context of prokaryotic ecology. In the deep Mediterranean layers, an usually-not-considered form of carbon sequestration through prokaryotic cells has been highlighted, which is consistent with an increase in cell size with the depth of the water column. A wide range in prokaryotic cell volumes was observed (between 0.045 and 0.566 μm3). Increase in cell size with depth was opposed to cell abundance distribution. Our results from microscopic observations were confirmed by the increasing HNA/LNA ratio (HNA, cells with high nucleic acid content; LNA, cells with low nucleic acid content) along the water column. Implications of our results on the increasing cell size with depth are in the fact that the quantitative estimation of prokaryotic biomass changes along the water column and the amount of carbon sequestered in the deep biota is enhanced.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=161881','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=161881"><span>Decolorization of Malachite Green and Crystal Violet by Waterborne Pathogenic Mycobacteria</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Jones, Jefferson J.; Falkinham III, Joseph O.</p> <p>2003-01-01</p> <p>Mycobacterium avium, Mycobacterium intracellulare, Mycobacterium scrofulaceum, Mycobacterium marinum, and Mycobacterium chelonae tolerate high concentrations of the dyes malachite green and crystal violet. Cells of strains of those species decolorized (reduced) both malachite green and crystal violet. Because decolorized malachite green lacked antimicrobial activity, the resistance of these mycobacteria could be due, in part, to their ability to decolorize the dyes. Small amounts of malachite green and its reduced, decolorized product were detected in the lipid fraction of M. avium strain A5 cells grown in the presence of malachite green, suggesting that a minor component of resistance could be due to sequestering the dyes in the extensive mycobacterial cell surface lipid. The membrane fraction of M. avium strain A5 had at least a fivefold-higher specific decolorization rate than did the crude extract, suggesting that the decolorization activity is membrane associated. The malachite green-decolorizing activity of the membrane fraction of M. avium strain A5 was abolished by either boiling or proteinase exposure, suggesting that the decolorizing activity was due to a protein. Decolorization activity of membrane fractions was stimulated by ferrous ion and inhibited by dinitrophenol and metyrapone. PMID:12821489</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27681920','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27681920"><span>Biofilms from Klebsiella pneumoniae: Matrix Polysaccharide Structure and Interactions with Antimicrobial Peptides.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Benincasa, Monica; Lagatolla, Cristina; Dolzani, Lucilla; Milan, Annalisa; Pacor, Sabrina; Liut, Gianfranco; Tossi, Alessandro; Cescutti, Paola; Rizzo, Roberto</p> <p>2016-08-10</p> <p>Biofilm matrices of two Klebsiella pneumoniae clinical isolates, KpTs101 and KpTs113, were investigated for their polysaccharide composition and protective effects against antimicrobial peptides. Both strains were good biofilm producers, with KpTs113 forming flocs with very low adhesive properties to supports. Matrix exopolysaccharides were isolated and their monosaccharide composition and glycosidic linkage types were defined. KpTs101 polysaccharide is neutral and composed only of galactose, in both pyranose and furanose ring configurations. Conversely, KpTs113 polysaccharide is anionic due to glucuronic acid units, and also contains glucose and mannose residues. The susceptibility of the two strains to two bovine cathelicidin antimicrobial peptides, BMAP-27 and Bac7(1-35), was assessed using both planktonic cultures and biofilms. Biofilm matrices exerted a relevant protection against both antimicrobials, which act with quite different mechanisms. Similar protection was also detected when antimicrobial peptides were tested against planktonic bacteria in the presence of the polysaccharides extracted from KpTs101 and KpTs113 biofilms, suggesting sequestering adduct formation with antimicrobials. Circular dichroism experiments on BMAP-27 in the presence of increasing amounts of either polysaccharide confirmed their ability to interact with the peptide and induce an α-helical conformation.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFMIN31B0077A','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFMIN31B0077A"><span>Predicting Seagrass Occurrence in a Changing Climate Using Random Forests</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Aydin, O.; Butler, K. A.</p> <p>2017-12-01</p> <p>Seagrasses are marine plants that can quickly sequester vast amounts of carbon (up to 100 times more and 12 times faster than tropical forests). In this work, we present an integrated GIS and machine learning approach to build a data-driven model of seagrass presence-absence. We outline a random forest approach that avoids the prevalence bias in many ecological presence-absence models. One of our goals is to predict global seagrass occurrence from a spatially limited training sample. In addition, we conduct a sensitivity study which investigates the vulnerability of seagrass to changing climate conditions. We integrate multiple data sources including fine-scale seagrass data from MarineCadastre.gov and the recently available globally extensive publicly available Ecological Marine Units (EMU) dataset. These data are used to train a model for seagrass occurrence along the U.S. coast. In situ oceans data are interpolated using Empirical Bayesian Kriging (EBK) to produce globally extensive prediction variables. A neural network is used to estimate probable future values of prediction variables such as ocean temperature to assess the impact of a warming climate on seagrass occurrence. The proposed workflow can be generalized to many presence-absence models.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25140329','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25140329"><span>The effects of rape residue mulching on net global warming potential and greenhouse gas intensity from no-tillage paddy fields.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Zhang, Zhi-Sheng; Cao, Cou-Gui; Guo, Li-Jin; Li, Cheng-Fang</p> <p>2014-01-01</p> <p>A field experiment was conducted to provide a complete greenhouse gas (GHG) accounting for global warming potential (GWP), net GWP, and greenhouse gas intensity (GHGI) from no-tillage (NT) paddy fields with different amounts of oilseed rape residue mulch (0, 3000, 4000, and 6000 kg dry matter (DM) ha(-1)) during a rice-growing season after 3 years of oilseed rape-rice cultivation. Residue mulching treatments showed significantly more organic carbon (C) density for the 0-20 cm soil layer at harvesting than no residue treatment. During a rice-growing season, residue mulching treatments sequestered significantly more organic C from 687 kg C ha(-1) season(-1) to 1654 kg C ha(-1) season(-1) than no residue treatment. Residue mulching significantly increased emissions of CO2 and N2O but decreased CH4 emissions. Residue mulching treatments significantly increased GWP by 9-30% but significantly decreased net GWP by 33-71% and GHGI by 35-72% relative to no residue treatment. These results suggest that agricultural economic viability and GHG mitigation can be achieved simultaneously by residue mulching on NT paddy fields in central China.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28498113','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28498113"><span>A greenhouse gas source of surprising significance: anthropogenic CO2 emissions from use of methanol in sewage treatment.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Willis, John L; Al-Omari, Ahmed; Bastian, Robert; Brower, Bill; DeBarbadillo, Christine; Murthy, Sudhir; Peot, Christopher; Yuan, Zhiguo</p> <p>2017-05-01</p> <p>The impact of methanol (CH 3 OH) as a source of anthropogenic carbon dioxide (CO 2 ) in denitrification at wastewater treatment plants (WWTPs) has never been quantified. CH 3 OH is the most commonly purchased carbon source for sewage denitrification. Until recently, greenhouse gas (GHG) reporting protocols consistently ignored the liberation of anthropogenic CO 2 attributable to CH 3 OH. This oversight can likely be attributed to a simplifying notion that CO 2 produced through activated-sludge-process respiration is biogenic because most raw-sewage carbon is un-sequestered prior to entering a WWTP. Instead, a biogenic categorization cannot apply to fossil-fuel-derived carbon sources like CH 3 OH. This paper provides a summary of how CH 3 OH use at DC Water's Blue Plains Advanced Wastewater Treatment Plant (AWTP; Washington, DC, USA) amounts to 60 to 85% of the AWTP's Scope-1 emissions. The United States Environmental Protection Agency and Water Environment Federation databases suggest that CH 3 OH CO 2 likely represents one quarter of all Scope-1 GHG emissions attributable to sewage treatment in the USA. Finally, many alternatives to CH 3 OH use exist and are discussed.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.congress.gov/bill/113th-congress/senate-bill/799?q=%7B%22search%22%3A%5B%225+AND+amendment%22%5D%7D&r=1','SCIGOV-CON-113'); return false;" href="https://www.congress.gov/bill/113th-congress/senate-bill/799?q=%7B%22search%22%3A%5B%225+AND+amendment%22%5D%7D&r=1"><span>A bill to provide for a sequester replacement.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://thomas.loc.gov/home/LegislativeData.php?&n=BSS&c=113">THOMAS, 113th Congress </a></p> <p>Sen. Inhofe, James M. [R-OK</p> <p>2013-04-24</p> <p>Senate - 04/25/2013 Read the second time. Placed on Senate Legislative Calendar under General Orders. Calendar No. 65. (All Actions) Tracker: This bill has the status IntroducedHere are the steps for Status of Legislation:</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/7118841-scale-converters-dissolution-scale-deposits','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/7118841-scale-converters-dissolution-scale-deposits"><span>Scale converters. [Dissolution of scale deposits</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Rybacki, R.L.</p> <p>1979-04-03</p> <p>A water-soluble maleate salt, preferably disodium maleate, is described as a scale solubilizer. Such salts convert scale into a water-soluble compound without the conventional step of employing either an acid wash or a sequestering agent. 10 claims.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017NatCh...9.1025M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017NatCh...9.1025M"><span>Salinomycin kills cancer stem cells by sequestering iron in lysosomes</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Mai, Trang Thi; Hamaï, Ahmed; Hienzsch, Antje; Cañeque, Tatiana; Müller, Sebastian; Wicinski, Julien; Cabaud, Olivier; Leroy, Christine; David, Amandine; Acevedo, Verónica; Ryo, Akihide; Ginestier, Christophe; Birnbaum, Daniel; Charafe-Jauffret, Emmanuelle; Codogno, Patrice; Mehrpour, Maryam; Rodriguez, Raphaël</p> <p>2017-10-01</p> <p>Cancer stem cells (CSCs) represent a subset of cells within tumours that exhibit self-renewal properties and the capacity to seed tumours. CSCs are typically refractory to conventional treatments and have been associated to metastasis and relapse. Salinomycin operates as a selective agent against CSCs through mechanisms that remain elusive. Here, we provide evidence that a synthetic derivative of salinomycin, which we named ironomycin (AM5), exhibits a more potent and selective activity against breast CSCs in vitro and in vivo, by accumulating and sequestering iron in lysosomes. In response to the ensuing cytoplasmic depletion of iron, cells triggered the degradation of ferritin in lysosomes, leading to further iron loading in this organelle. Iron-mediated production of reactive oxygen species promoted lysosomal membrane permeabilization, activating a cell death pathway consistent with ferroptosis. These findings reveal the prevalence of iron homeostasis in breast CSCs, pointing towards iron and iron-mediated processes as potential targets against these cells.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/15093515','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/15093515"><span>Hydrophobic organochlorine compounds sequestered in submersed aquatic macrophytes (Hydrilla verticillata (L.F.) Royle) from the tidal Potomac River (USA).</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Hopple, J A; Foster, G D</p> <p>1996-01-01</p> <p>The potential for hydrophobic organochlorine contaminants to be sequestered in submersed aquatic vegetation was evaluated by determining the concentrations of cis- and trans-chlordane, dieldrin, and polychlorinated biphenyls (PCBs) in feral aquatic macrophytes (Hydrilla verticillata (L.f.) Royle) collected from the tidal Potomac River. Similarities in mean dry-weight concentrations of the identified organochlorine compounds in H. verticillata and surrounding alluvial sediments indicated that the extent of sequestration in H. verticillata was of the same magnitude as sorption of these compounds to river sediments, but some qualitative differences in PCB congener profiles existed. The results imply that to some degree H. verticillata can influence downstream fluxes of organic contaminants in fluvial transport in the Potomac River, and, furthermore, identify this species as a viable candidate organism for hydrophobic organochlorine contaminant biomonitoring in the Chesapeake Bay estuary.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=515048','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=515048"><span>Mutant Huntingtin Impairs Axonal Trafficking in Mammalian Neurons In Vivo and In Vitro</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Trushina, Eugenia; Dyer, Roy B.; Badger, John D.; Ure, Daren; Eide, Lars; Tran, David D.; Vrieze, Brent T.; Legendre-Guillemin, Valerie; McPherson, Peter S.; Mandavilli, Bhaskar S.; Van Houten, Bennett; Zeitlin, Scott; McNiven, Mark; Aebersold, Ruedi; Hayden, Michael; Parisi, Joseph E.; Seeberg, Erling; Dragatsis, Ioannis; Doyle, Kelly; Bender, Anna; Chacko, Celin; McMurray, Cynthia T.</p> <p>2004-01-01</p> <p>Recent data in invertebrates demonstrated that huntingtin (htt) is essential for fast axonal trafficking. Here, we provide direct and functional evidence that htt is involved in fast axonal trafficking in mammals. Moreover, expression of full-length mutant htt (mhtt) impairs vesicular and mitochondrial trafficking in mammalian neurons in vitro and in whole animals in vivo. Particularly, mitochondria become progressively immobilized and stop more frequently in neurons from transgenic animals. These defects occurred early in development prior to the onset of measurable neurological or mitochondrial abnormalities. Consistent with a progressive loss of function, wild-type htt, trafficking motors, and mitochondrial components were selectively sequestered by mhtt in human Huntington's disease-affected brain. Data provide a model for how loss of htt function causes toxicity; mhtt-mediated aggregation sequesters htt and components of trafficking machinery leading to loss of mitochondrial motility and eventual mitochondrial dysfunction. PMID:15340079</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li class="active"><span>20</span></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_20 --> <div id="page_21" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li class="active"><span>21</span></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="401"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70018212','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70018212"><span>Hydrophobic organochlorine compounds sequestered in submersed aquatic macrophytes (Hydrilla yerticillata (L.f.) Royle) from the tidal Potomac River (USA)</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Hopple, J.A.; Foster, G.D.</p> <p>1996-01-01</p> <p>The potential for hydrophobic organochlorine contaminants to be sequestered in submersed aquatic vegetation was evaluated by determining the concentrations of cis- and trans-chlordane, dieldrin, and polychlorinated biphenyls (PCBs) in feral aquatic macrophytes (Hydrilla verticillata (L.f.) Royle) collected from the tidal Potomac River. Similarities in mean dry-weight concentrations of the identified organochlorine compounds in H. verticillata and surrounding alluvial sediments indicated that the extent of sequestration in H. verticillata was of the same magnitude as sorption of these compounds to river sediments, but some qualitative differences in PCB congener profiles existed. The results imply that to some degree H. verticillata can influence downstream fluxes of organic contaminants in fluvial transport in the Potomac River, and, furthermore, identify this species as a viable candidate organism for hydrophobic organochlorine contaminant biomonitoring in the Chesapeake Bay estuary.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25497054','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25497054"><span>Biosequestration of atmospheric CO2 and flue gas-containing CO2 by microalgae.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Cheah, Wai Yan; Show, Pau Loke; Chang, Jo-Shu; Ling, Tau Chuan; Juan, Joon Ching</p> <p>2015-05-01</p> <p>The unceasing rise of greenhouse gas emission has led to global warming and climate change. Global concern on this phenomenon has put forward the microalgal-based CO2 sequestration aiming to sequester carbon back to the biosphere, ultimately reducing greenhouse effects. Microalgae have recently gained enormous attention worldwide, to be the valuable feedstock for renewable energy production, due to their high growth rates, high lipid productivities and the ability to sequester carbon. The photosynthetic process of microalgae uses atmospheric CO2 and CO2 from flue gases, to synthesize nutrients for their growth. In this review article, we will primarily discuss the efficiency of CO2 biosequestration by microalgae species, factors influencing microalgal biomass productions, microalgal cultivation systems, the potential and limitations of using flue gas for microalgal cultivation as well as the bio-refinery approach of microalgal biomass. Copyright © 2014 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28280441','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28280441"><span>Sequestered gravity in gauge mediation.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Antoniadis, Ignatios; Benakli, Karim; Quiros, Mariano</p> <p>2016-01-01</p> <p>We present a novel mechanism of supersymmetry breaking embeddable in string theory and simultaneously sharing the main advantages of (sequestered) gravity and gauge mediation. It is driven by a Scherk-Schwarz deformation along a compact extra dimension, transverse to a brane stack supporting the supersymmetric extension of the Standard Model. This fixes the magnitude of the gravitino mass, together with that of the gauginos of a bulk gauge group, at a scale as high as [Formula: see text] GeV. Supersymmetry breaking is mediated to the observable sector dominantly by gauge interactions using massive messengers transforming non-trivially under the bulk and Standard Model gauge groups and leading to a neutralino LSP as dark matter candidate. The Higgsino mass [Formula: see text] and soft Higgs-bilinear [Formula: see text] term could be generated at the same order of magnitude as the other soft terms by effective supergravity couplings as in the Giudice-Masiero mechanism.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28371332','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28371332"><span>Fluorinated methacrylamide chitosan sequesters reactive oxygen species to relieve oxidative stress while delivering oxygen.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Patil, Pritam S; Leipzig, Nic D</p> <p>2017-08-01</p> <p>Antioxidants play an important role in regulating overabundant reactive oxygen species (ROS) in wound healing to reduce oxidative stress and inflammation. In this work, we demonstrate for the first time that functionalization of methacrylamide chitosan (MAC) with aliphatic pentadecafluoro chains, to synthesize pentadecafluoro-octanoyl methacrylamide chitosan (MACF), enhances the antioxidant capacity of the MAC base hydrogel material, while being able to deliver oxygen for future enhanced wound healing applications. As such, MACF was shown to sequester more nitric oxide (p < 0.01) and hydroxyl (p < 0.0001) radicals as compared to the negative control even when delivering additional oxygen. MACF's beneficial antioxidant capacity was further confirmed in in vitro cell culture experiments using human dermal fibroblasts stressed with 2,2'-azobis(2-methylpropionamidine) dihydrochloride (AAPH). © 2017 Wiley Periodicals, Inc. J Biomed Mater Res Part A: 105A: 2368-2374, 2017. © 2017 Wiley Periodicals, Inc.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/826382','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/826382"><span>Strategies for the Engineered Phytoremediation of Mercury and Arsenic Pollution</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Dhankher, Om Parkash; Meagher, Richard B.</p> <p>2003-03-26</p> <p>Phytoremediation is the use of plants to extract, transport, detoxify and/or sequester pollutants of the land, water or air. Mercury and arsenic are among the worst environmental pollutants, adversely affecting the health of hundreds of millions of people worldwide. We have demonstrated that plants can be engineered to take up and tolerate several times the levels of mercury and arsenic that would kill most plant species. Starting with methylmercury and/or ionic mercury contamination, mercury is detoxified, stored below or above ground, and even volatilized as part of the transpiration process and keeping it out of the food chain. Initial effortsmore » with arsenate demonstrate that it can be taken up, transported aboveground, electrochemically reduced to arsenite in leaves and sequestered in thiol-rich peptide complexes. The transgenic mercury remediation strategies also worked in cultivated and wild plant species like canola, rice and cottonwood.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/16630815','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/16630815"><span>Toxoplasma gondii sequesters lysosomes from mammalian hosts in the vacuolar space.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Coppens, Isabelle; Dunn, Joe Dan; Romano, Julia D; Pypaert, Marc; Zhang, Hui; Boothroyd, John C; Joiner, Keith A</p> <p>2006-04-21</p> <p>The intracellular compartment harboring Toxoplasma gondii satisfies the parasite's nutritional needs for rapid growth in mammalian cells. We demonstrate that the parasitophorous vacuole (PV) of T. gondii accumulates material coming from the host mammalian cell via the exploitation of the host endo-lysosomal system. The parasite actively recruits host microtubules, resulting in selective attraction of endo-lysosomes to the PV. Microtubule-based invaginations of the PV membrane serve as conduits for the delivery of host endo-lysosomes within the PV. These tubular conduits are decorated by a parasite coat, including the tubulogenic protein GRA7, which acts like a garrote that sequesters host endocytic organelles in the vacuolar space. These data define an unanticipated process allowing the parasite intimate and concentrated access to a diverse range of low molecular weight components produced by the endo-lysosomal system. More generally, they identify a unique mechanism for unidirectional transport and sequestration of host organelles.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/6928624-mechanism-thorium-biosorption-rhizopus-arrhizus','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/6928624-mechanism-thorium-biosorption-rhizopus-arrhizus"><span>The mechanism of thorium biosorption by Rhizopus arrhizus</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Tsezos, M.; Volesky, B.</p> <p>1982-04-01</p> <p>Inactive cells of Rhizopus arrhizus have been documented to exhibit a high thorium biosorptive uptake (170 mg/g) from aqueous solutions. The mechanism of thorium sequestering by this biomass type was investigated following the same method as for the uranium biosorption emchanism. The thorium sequestering mechanism appeared somewhat different from that of uranium. Experimental evidence is presented which indicates that, at optimum biosorption pH (4), thorium coordinates with the nitroge of the chitin cell wall network and, in addition, more thorium is adsorbed by the external section of the fungal cell wall. At pH 2 the overall thorium uptake is reduced.more » The kinetic study of thorium biosorption revealed a very rapid rate of uptake. Unlike uranium at optimum solution pH, Fe/sup 2 +/ and Zn/sup 2 +/ did not interfere significantly with the thorium biosorptive uptake capacity of R. arrhizus.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/20230030','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/20230030"><span>Attenuation of Vibrio fischeri quorum sensing using rationally designed polymers.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Piletska, Elena V; Stavroulakis, Georgios; Karim, Kal; Whitcombe, Michael J; Chianella, Iva; Sharma, Anant; Eboigbodin, Kevin E; Robinson, Gary K; Piletsky, Sergey A</p> <p>2010-04-12</p> <p>A first attempt to attenuate the quorum sensing (QS) of a marine heterotroph microorganism, Vibrio fischeri , using signal molecule-sequestering polymers (SSPs) is presented. A set of rationally designed polymers with affinity toward a signal molecule of V. fischeri , N-(beta-ketocaproyl)-l-homoserine lactone (3-oxo-C6-AHL) was produced. It is reported that computationally designed polymers could sequester a signal molecule of V. fischeri and prevent QS-controlled phenotypes (in this case, bioluminescence) from being up-regulated. It was proven that the attenuation of bioluminescence of V. fischeri was due to sequestration of the signal molecule by specific polymers and not due to the toxicity of polymer or nonspecific depletion of nutrients. The ability to disrupt the bacterial communication using easy to synthesize and chemically inert polymers could provide a new concept for the development of pharmaceuticals and susceptible device coatings such as catheters.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/5585995-colestipol-hydrochloride-prophylaxis-diarrhea-during-pelvic-radiotherapy','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/5585995-colestipol-hydrochloride-prophylaxis-diarrhea-during-pelvic-radiotherapy"><span>Colestipol hydrochloride prophylaxis of diarrhea during pelvic radiotherapy</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Stryker, J.A.; Chung, C.K.; Layser, J.D.</p> <p>1983-02-01</p> <p>Thirty-three patients were randomized prior to pelvic radiotherapy to receive the bile acid-sequestering resin colestipol hydrochloride, 5 grams qid, during the entire time of their therapy or diphenoxylate hydrochloride and atropine sulfate 2.5-20 mg per day (control) if they experienced diarrhea. The colestipol patients also took diphenoxylate if they had diarrhea. The patients in the colestipol group often experienced nausea, vomiting, and abdominal cramps and 8 were forced to discontinue the drug. There was no difference in the weekly stool frequency between the colestipol and the control patients but the colestipol patients who took at least 50% of the prescribedmore » dose required fewer diphenoxylate tablets than the controls. The data suggest that colestipol hydrochloride is not of value in preventing radiation-induced diarrhea because of the side effects associated with the drug, but the theory on which the use of bile acid-sequestering agents is based may be correct.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/1047284','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/1047284"><span>Renewal of Collaborative Research: Economically Viable Forest Harvesting Practices That Increase Carbon Sequestration</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Davidson, E.A.; Dail, D.B., Hollinger, D.; Scott, N.</p> <p></p> <p>Forests provide wildlife habitat, water and air purification, climate moderation, and timber and nontimber products. Concern about climate change has put forests in the limelight as sinks of atmospheric carbon. The C stored in the global vegetation, mostly in forests, is nearly equivalent to the amount present in atmospheric CO{sub 2}. Both voluntary and government-mandated carbon trading markets are being developed and debated, some of which include C sequestration resulting from forest management as a possible tradeable commodity. However, uncertainties regarding sources of variation in sequestration rates, validation, and leakage remain significant challenges for devising strategies to include forest managementmore » in C markets. Hence, the need for scientifically-based information on C sequestration by forest management has never been greater. The consequences of forest management on the US carbon budget are large, because about two-thirds of the {approx}300 million hectare US forest resource is classified as 'commercial forest.' In most C accounting budgets, forest harvesting is usually considered to cause a net release of C from the terrestrial biosphere to the atmosphere. However, forest management practices could be designed to meet the multiple goals of providing wood and paper products, creating economic returns from natural resources, while sequestering C from the atmosphere. The shelterwood harvest strategy, which removes about 30% of the basal area of the overstory trees in each of three successive harvests spread out over thirty years as part of a stand rotation of 60-100 years, may improve net C sequestration compared to clear-cutting because: (1) the average C stored on the land surface over a rotation increases, (2) harvesting only overstory trees means that a larger fraction of the harvested logs can be used for long-lived sawtimber products, compared to more pulp resulting from clearcutting, (3) the shelterwood cut encourages growth of subcanopy trees by opening up the forest canopy to increasing light penetration. Decomposition of onsite harvest slash and of wastes created during timber processing releases CO{sub 2} to the atmosphere, thus offsetting some of the C sequestered in vegetation. Decomposition of soil C and dead roots may also be temporarily stimulated by increased light penetration and warming of the forest floor. Quantification of these processes and their net effect is needed. We began studying C sequestration in a planned shelterwood harvest at the Howland Forest in central Maine in 2000. The harvest took place in 2002 by the International Paper Corporation, who assisted us to track the fates of harvest products (Scott et al., 2004, Environmental Management 33: S9-S22). Here we present the results of intensive on-site studies of the decay of harvest slash, soil respiration, growth of the remaining trees, and net ecosystem exchange (NEE) of CO{sub 2} during the first six years following the harvest. These results are combined with calculations of C in persisting off-site harvest products to estimate the net C consequences to date of this commercial shelterwood harvest operation. Tower-based eddy covariance is an ideal method for this study, as it integrates all C fluxes in and out of the forest over a large 'footprint' area and can reveal how the net C flux, as well as gross primary productivity and respiration, change following harvest. Because the size of this experiment precludes large-scale replication, we are use a paired-airshed approach, similar to classic large-scale paired watershed experiments. Measurements of biomass and C fluxes in control and treatment stands were compared during a pre-treatment calibration period, and then divergence from pre-treatment relationships between the two sites measured after the harvest treatment. Forests store carbon (C) as they accumulate biomass. Many forests are also commercial sources of timber and wood fiber. In most C accounting budgets, forest harvesting is usually considered to cause a net release of C from the terrestrial biosphere to the atmosphere. However, it might also be possible for commercial use of forests to contribute to terrestrial sequestration of C. The objective of the our research project is to determine whether shelterwood cutting regimes now being adopted in the commercial forests of Maine and other areas of the country can achieve these multiple goals.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2018ERL....13f4028H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2018ERL....13f4028H"><span>Ratcheting ambition to limit warming to 1.5 °C–trade-offs between emission reductions and carbon dioxide removal</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Holz, Christian; Siegel, Lori S.; Johnston, Eleanor; Jones, Andrew P.; Sterman, John</p> <p>2018-06-01</p> <p>Mitigation scenarios to limit global warming to 1.5 °C or less in 2100 often rely on large amounts of carbon dioxide removal (CDR), which carry significant potential social, environmental, political and economic risks. A precautionary approach to scenario creation is therefore indicated. This letter presents the results of such a precautionary modelling exercise in which the models C-ROADS and En-ROADS were used to generate a series of 1.5 °C mitigation scenarios that apply increasingly stringent constraints on the scale and type of CDR available. This allows us to explore the trade-offs between near-term stringency of emission reductions and assumptions about future availability of CDR. In particular, we find that regardless of CDR assumptions, near-term ambition increase (‘ratcheting’) is required for any 1.5 °C pathway, making this letter timely for the facilitative, or Talanoa, dialogue to be conducted by the UNFCCC in 2018. By highlighting the difference between net and gross reduction rates, often obscured in scenarios, we find that mid-term gross CO2 emission reduction rates in scenarios with CDR constraints increase to levels without historical precedence. This in turn highlights, in addition to the need to substantially increase CO2 reduction rates, the need to improve emission reductions for non-CO2 greenhouse gases. Further, scenarios in which all or part of the CDR is implemented as non-permanent storage exhibit storage loss emissions, which partly offset CDR, highlighting the importance of differentiating between net and gross CDR in scenarios. We find in some scenarios storage loss trending to similar values as gross CDR, indicating that gross CDR would have to be maintained simply to offset the storage losses of CO2 sequestered earlier, without any additional net climate benefit.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23110428','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23110428"><span>Bio-crude transcriptomics: gene discovery and metabolic network reconstruction for the biosynthesis of the terpenome of the hydrocarbon oil-producing green alga, Botryococcus braunii race B (Showa).</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Molnár, István; Lopez, David; Wisecaver, Jennifer H; Devarenne, Timothy P; Weiss, Taylor L; Pellegrini, Matteo; Hackett, Jeremiah D</p> <p>2012-10-30</p> <p>Microalgae hold promise for yielding a biofuel feedstock that is sustainable, carbon-neutral, distributed, and only minimally disruptive for the production of food and feed by traditional agriculture. Amongst oleaginous eukaryotic algae, the B race of Botryococcus braunii is unique in that it produces large amounts of liquid hydrocarbons of terpenoid origin. These are comparable to fossil crude oil, and are sequestered outside the cells in a communal extracellular polymeric matrix material. Biosynthetic engineering of terpenoid bio-crude production requires identification of genes and reconstruction of metabolic pathways responsible for production of both hydrocarbons and other metabolites of the alga that compete for photosynthetic carbon and energy. A de novo assembly of 1,334,609 next-generation pyrosequencing reads form the Showa strain of the B race of B. braunii yielded a transcriptomic database of 46,422 contigs with an average length of 756 bp. Contigs were annotated with pathway, ontology, and protein domain identifiers. Manual curation allowed the reconstruction of pathways that produce terpenoid liquid hydrocarbons from primary metabolites, and pathways that divert photosynthetic carbon into tetraterpenoid carotenoids, diterpenoids, and the prenyl chains of meroterpenoid quinones and chlorophyll. Inventories of machine-assembled contigs are also presented for reconstructed pathways for the biosynthesis of competing storage compounds including triacylglycerol and starch. Regeneration of S-adenosylmethionine, and the extracellular localization of the hydrocarbon oils by active transport and possibly autophagy are also investigated. The construction of an annotated transcriptomic database, publicly available in a web-based data depository and annotation tool, provides a foundation for metabolic pathway and network reconstruction, and facilitates further omics studies in the absence of a genome sequence for the Showa strain of B. braunii, race B. Further, the transcriptome database empowers future biosynthetic engineering approaches for strain improvement and the transfer of desirable traits to heterologous hosts.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4657486','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4657486"><span>Rapid carbon turnover beneath shrub and tree vegetation is associated with low soil carbon stocks at a subarctic treeline</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Parker, Thomas C; Subke, Jens-Arne; Wookey, Philip A</p> <p>2015-01-01</p> <p>Climate warming at high northern latitudes has caused substantial increases in plant productivity of tundra vegetation and an expansion of the range of deciduous shrub species. However significant the increase in carbon (C) contained within above-ground shrub biomass, it is modest in comparison with the amount of C stored in the soil in tundra ecosystems. Here, we use a ‘space-for-time’ approach to test the hypothesis that a shift from lower-productivity tundra heath to higher-productivity deciduous shrub vegetation in the sub-Arctic may lead to a loss of soil C that out-weighs the increase in above-ground shrub biomass. We further hypothesize that a shift from ericoid to ectomycorrhizal systems coincident with this vegetation change provides a mechanism for the loss of soil C. We sampled soil C stocks, soil surface CO2 flux rates and fungal growth rates along replicated natural transitions from birch forest (Betula pubescens), through deciduous shrub tundra (Betula nana) to tundra heaths (Empetrum nigrum) near Abisko, Swedish Lapland. We demonstrate that organic horizon soil organic C (SOCorg) is significantly lower at shrub (2.98 ± 0.48 kg m−2) and forest (2.04 ± 0.25 kg m−2) plots than at heath plots (7.03 ± 0.79 kg m−2). Shrub vegetation had the highest respiration rates, suggesting that despite higher rates of C assimilation, C turnover was also very high and less C is sequestered in the ecosystem. Growth rates of fungal hyphae increased across the transition from heath to shrub, suggesting that the action of ectomycorrhizal symbionts in the scavenging of organically bound nutrients is an important pathway by which soil C is made available to microbial degradation. The expansion of deciduous shrubs onto potentially vulnerable arctic soils with large stores of C could therefore represent a significant positive feedback to the climate system. PMID:25367088</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25367088','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25367088"><span>Rapid carbon turnover beneath shrub and tree vegetation is associated with low soil carbon stocks at a subarctic treeline.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Parker, Thomas C; Subke, Jens-Arne; Wookey, Philip A</p> <p>2015-05-01</p> <p>Climate warming at high northern latitudes has caused substantial increases in plant productivity of tundra vegetation and an expansion of the range of deciduous shrub species. However significant the increase in carbon (C) contained within above-ground shrub biomass, it is modest in comparison with the amount of C stored in the soil in tundra ecosystems. Here, we use a 'space-for-time' approach to test the hypothesis that a shift from lower-productivity tundra heath to higher-productivity deciduous shrub vegetation in the sub-Arctic may lead to a loss of soil C that out-weighs the increase in above-ground shrub biomass. We further hypothesize that a shift from ericoid to ectomycorrhizal systems coincident with this vegetation change provides a mechanism for the loss of soil C. We sampled soil C stocks, soil surface CO2 flux rates and fungal growth rates along replicated natural transitions from birch forest (Betula pubescens), through deciduous shrub tundra (Betula nana) to tundra heaths (Empetrum nigrum) near Abisko, Swedish Lapland. We demonstrate that organic horizon soil organic C (SOCorg ) is significantly lower at shrub (2.98 ± 0.48 kg m(-2) ) and forest (2.04 ± 0.25 kg m(-2) ) plots than at heath plots (7.03 ± 0.79 kg m(-2) ). Shrub vegetation had the highest respiration rates, suggesting that despite higher rates of C assimilation, C turnover was also very high and less C is sequestered in the ecosystem. Growth rates of fungal hyphae increased across the transition from heath to shrub, suggesting that the action of ectomycorrhizal symbionts in the scavenging of organically bound nutrients is an important pathway by which soil C is made available to microbial degradation. The expansion of deciduous shrubs onto potentially vulnerable arctic soils with large stores of C could therefore represent a significant positive feedback to the climate system. © 2014 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3533583','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3533583"><span>Bio-crude transcriptomics: Gene discovery and metabolic network reconstruction for the biosynthesis of the terpenome of the hydrocarbon oil-producing green alga, Botryococcus braunii race B (Showa)*</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p></p> <p>2012-01-01</p> <p>Background Microalgae hold promise for yielding a biofuel feedstock that is sustainable, carbon-neutral, distributed, and only minimally disruptive for the production of food and feed by traditional agriculture. Amongst oleaginous eukaryotic algae, the B race of Botryococcus braunii is unique in that it produces large amounts of liquid hydrocarbons of terpenoid origin. These are comparable to fossil crude oil, and are sequestered outside the cells in a communal extracellular polymeric matrix material. Biosynthetic engineering of terpenoid bio-crude production requires identification of genes and reconstruction of metabolic pathways responsible for production of both hydrocarbons and other metabolites of the alga that compete for photosynthetic carbon and energy. Results A de novo assembly of 1,334,609 next-generation pyrosequencing reads form the Showa strain of the B race of B. braunii yielded a transcriptomic database of 46,422 contigs with an average length of 756 bp. Contigs were annotated with pathway, ontology, and protein domain identifiers. Manual curation allowed the reconstruction of pathways that produce terpenoid liquid hydrocarbons from primary metabolites, and pathways that divert photosynthetic carbon into tetraterpenoid carotenoids, diterpenoids, and the prenyl chains of meroterpenoid quinones and chlorophyll. Inventories of machine-assembled contigs are also presented for reconstructed pathways for the biosynthesis of competing storage compounds including triacylglycerol and starch. Regeneration of S-adenosylmethionine, and the extracellular localization of the hydrocarbon oils by active transport and possibly autophagy are also investigated. Conclusions The construction of an annotated transcriptomic database, publicly available in a web-based data depository and annotation tool, provides a foundation for metabolic pathway and network reconstruction, and facilitates further omics studies in the absence of a genome sequence for the Showa strain of B. braunii, race B. Further, the transcriptome database empowers future biosynthetic engineering approaches for strain improvement and the transfer of desirable traits to heterologous hosts. PMID:23110428</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017E%26PSL.479...71K','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017E%26PSL.479...71K"><span>Redox-controlled carbon and phosphorus burial: A mechanism for enhanced organic carbon sequestration during the PETM</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Komar, Nemanja; Zeebe, Richard E.</p> <p>2017-12-01</p> <p>Geological records reveal a major perturbation in carbon cycling during the Paleocene-Eocene Thermal Maximum (PETM, ∼56 Ma), marked by global warming of more than 5 °C and a prominent negative carbon isotope excursion of at least 2.5‰ within the marine realm. The entire event lasted about 200,000 yr and was associated with a massive release of light carbon into the ocean-atmosphere system over several thousands of years. Here we focus on the terminal stage of the PETM, during which the ocean-atmosphere system rapidly recovered from the carbon cycle perturbation. We employ a carbon-cycle box model to examine the feedbacks between surface ocean biological production, carbon, oxygen, phosphorus, and carbonate chemistry during massive CO2 release events, such as the PETM. The model results indicate that the redox-controlled carbon-phosphorus feedback is capable of producing enhanced organic carbon sequestration during large carbon emission events. The locale of carbon oxidation (ocean vs. atmosphere) does not affect the amount of carbon sequestered. However, even though the model produces trends consistent with oxygen, excess accumulation rates of organic carbon (∼1700 Pg C during the recovery stage), export production and δ13 C data, it fails to reproduce the magnitude of change of sediment carbonate content and the CCD over-deepening during the recovery stage. The CCD and sediment carbonate content overshoot during the recovery stage is muted by a predicted increase in CaCO3 rain. Nonetheless, there are indications that the CaCO3 export remained relatively constant during the PETM. If this was indeed true, then an initial pulse of 3,000 Pg C followed by an additional, slow leak of 2,500 Pg C could have triggered an accelerated nutrient supply to the surface ocean instigating enhanced organic carbon export, consequently increasing organic carbon sequestration, resulting in an accelerated restoration of ocean-atmosphere biogeochemistry during the termination phase of the PETM.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29658158','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29658158"><span>Limited evidence for CO2 -related growth enhancement in northern Rocky Mountain lodgepole pine populations across climate gradients.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Reed, Charlotte C; Ballantyne, Ashley P; Cooper, Leila Annie; Sala, Anna</p> <p>2018-04-15</p> <p>Forests sequester large amounts of carbon annually and are integral in buffering against effects of global change. Increasing atmospheric CO 2 may enhance photosynthesis and/or decrease stomatal conductance (g s ) thereby enhancing intrinsic water-use efficiency (iWUE), having potential indirect and direct benefits to tree growth. While increasing iWUE has been observed in most trees globally, enhanced growth is not ubiquitous, possibly due to concurrent climatic constraints on growth. To investigate our incomplete understanding of interactions between climate and CO 2 and their impacts on tree physiology and growth, we used an environmental gradient approach. We combined dendrochronology with carbon isotope analysis (δ 13 C) to assess the covariation of basal area increment (BAI) and iWUE over time in lodgepole pine. Trees were sampled at 18 sites spanning two climatically distinct elevation transects on the lee and windward sides of the Continental Divide, encompassing the majority of lodgepole pine's northern Rocky Mountain elevational range. We analyzed BAI and iWUE from 1950 to 2015, and explored correlations with monthly climate variables. As expected, iWUE increased at all sites. However, concurrent growth trends depended on site climatic water deficit (CWD). Significant growth increases occurred only at the driest sites, where increases in iWUE were strongest, while growth decreases were greatest at sites where CWD has been historically lowest. Late summer drought of the previous year negatively affected growth across sites. These results suggest that increasing iWUE, if strong enough, may indirectly benefit growth at drier sites by effectively extending the growing season via reductions in g s . Strong growth decreases at high elevation windward sites may reflect increasing water stress as a result of decreasing snowpack, which was not offset by greater iWUE. Our results imply that increasing iWUE driven by decreasing g s may benefit tree growth in limited scenarios, having implications for future carbon uptake potential of semiarid ecosystems. © 2018 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3855771','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3855771"><span>Morphology, Chemistry and Function of the Postpharyngeal Gland in the South American Digger Wasps Trachypus boharti and Trachypus elongatus</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Herzner, Gudrun; Kaltenpoth, Martin; Poettinger, Theodor; Weiss, Katharina; Koedam, Dirk; Kroiss, Johannes; Strohm, Erhard</p> <p>2013-01-01</p> <p>Microbes pose severe threats to animals as competitors or pathogens and strongly affect the evolution of life history traits like parental care. Females of the European beewolf Philanthus triangulum, a solitary digger wasp, provision their offspring with paralyzed honeybees and embalm them with the secretion from large postpharyngeal glands (PPG) that contain mainly unsaturated hydrocarbons. This coating changes the physico-chemical properties of the prey surface, causes a reduction of water condensation and retards growth of mold fungi. Here we examined the closely related South American genus Trachypus, which shows a life-history similar to Philanthus. We investigated whether Trachypus spp. also possess PPGs and embalm larval provisions. Using histological methods and 3D reconstructions we show that Trachypus boharti and T. elongatus possess PPGs that are similar to P. triangulum but somewhat smaller. The ultrastructure of the gland epithelium suggests that the gland content is at least partly sequestered from the hemolymph. Chemical analyses using gas chromatography / mass spectrometry revealed that both the cuticle and PPGs of Trachypus contain mainly unsaturated long-chain hydrocarbons. The gland of T. boharti additionally contains long-chain ketones. The hydrocarbons from the PPG of T. elongatus occurred on prey bees excavated from nests in the field but not on conspecific control bees. While the embalming only slightly elevated the amount of hydrocarbons on prey bees, the proportion of unsaturated hydrocarbons, which is crucial for the antifungal effect, was significantly increased. The Trachypus species under study possess PPGs that are very similar to the PPG of P. triangulum with regard to morphology, ultrastructure and chemistry. Moreover, we provide clear evidence that T. elongatus females embalm their prey, presumably as a means of prey preservation. The observed differences among Trachypus and Philanthus in gland size and prey embalming may have evolved in response to divergent ecological conditions. PMID:24324830</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24038905','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24038905"><span>Carbon sequestration potential of soils in southeast Germany derived from stable soil organic carbon saturation.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Wiesmeier, Martin; Hübner, Rico; Spörlein, Peter; Geuß, Uwe; Hangen, Edzard; Reischl, Arthur; Schilling, Bernd; von Lützow, Margit; Kögel-Knabner, Ingrid</p> <p>2014-02-01</p> <p>Sequestration of atmospheric carbon (C) in soils through improved management of forest and agricultural land is considered to have high potential for global CO2 mitigation. However, the potential of soils to sequester soil organic carbon (SOC) in a stable form, which is limited by the stabilization of SOC against microbial mineralization, is largely unknown. In this study, we estimated the C sequestration potential of soils in southeast Germany by calculating the potential SOC saturation of silt and clay particles according to Hassink [Plant and Soil 191 (1997) 77] on the basis of 516 soil profiles. The determination of the current SOC content of silt and clay fractions for major soil units and land uses allowed an estimation of the C saturation deficit corresponding to the long-term C sequestration potential. The results showed that cropland soils have a low level of C saturation of around 50% and could store considerable amounts of additional SOC. A relatively high C sequestration potential was also determined for grassland soils. In contrast, forest soils had a low C sequestration potential as they were almost C saturated. A high proportion of sites with a high degree of apparent oversaturation revealed that in acidic, coarse-textured soils the relation to silt and clay is not suitable to estimate the stable C saturation. A strong correlation of the C saturation deficit with temperature and precipitation allowed a spatial estimation of the C sequestration potential for Bavaria. In total, about 395 Mt CO2 -equivalents could theoretically be stored in A horizons of cultivated soils - four times the annual emission of greenhouse gases in Bavaria. Although achieving the entire estimated C storage capacity is unrealistic, improved management of cultivated land could contribute significantly to CO2 mitigation. Moreover, increasing SOC stocks have additional benefits with respect to enhanced soil fertility and agricultural productivity. © 2013 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2009AGUFMOS33A1221H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2009AGUFMOS33A1221H"><span>The German collaborative project SUGAR Utilization of a natural treasure - Developing innovative techniques for the exploration and production of natural gas from hydrate-bearing sediments</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Haeckel, M.; Bialas, J.; Wallmann, K. J.</p> <p>2009-12-01</p> <p>Gas hydrates occur in nature at all active and passive continental margins as well as in permafrost regions, and vast amounts of natural gas are bound in those deposits. Geologists estimate that twice as much carbon is bound in gas hydrates than in any other fossil fuel reservoir, such as gas, oil and coal. Hence, natural gas hydrates represent a huge potential energy resource that, in addition, could be utilized in a CO2-neutral and therefore environmentally friendly manner. However, the utilization of this natural treasure is not as easy as the conventional production of oil or natural gas and calls for new and innovative techniques. In the framework of the large-scale collaborative research project SUGAR (Submarine Deposits of Gas Hydrates - Exploration, Production and Transportation), we aim to produce gas from methane hydrates and to sequester carbon dioxide from power plants and other industrial sources as CO2 hydrates in the same host sediments. Thus, the SUGAR project addresses two of the most pressing and challenging topics of our time: development of alternative energy strategies and greenhouse gas mitigation techniques. The SUGAR project is funded by two federal German ministries and the German industry for an initial period of three years. In the framework of this project new technologies starting from gas hydrate exploration techniques over drilling technologies and innovative gas production methods to CO2 storage in gas hydrates and gas transportation technologies will be developed and tested. Beside the performance of experiments, numerical simulation studies will generate data regarding the methane production and CO2 sequestration in the natural environment. Reservoir modelling with respect to gas hydrate formation and development of migration pathways complete the project. This contribution will give detailed information about the planned project parts and first results with focus on the production methods.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li class="active"><span>21</span></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_21 --> <div id="page_22" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li class="active"><span>22</span></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="421"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26718892','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26718892"><span>Nitrogen availability increases in a tundra ecosystem during five years of experimental permafrost thaw.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Salmon, Verity G; Soucy, Patrick; Mauritz, Marguerite; Celis, Gerardo; Natali, Susan M; Mack, Michelle C; Schuur, Edward A G</p> <p>2016-05-01</p> <p>Perennially frozen soil in high latitude ecosystems (permafrost) currently stores 1330-1580 Pg of carbon (C). As these ecosystems warm, the thaw and decomposition of permafrost is expected to release large amounts of C to the atmosphere. Fortunately, losses from the permafrost C pool will be partially offset by increased plant productivity. The degree to which plants are able to sequester C, however, will be determined by changing nitrogen (N) availability in these thawing soil profiles. N availability currently limits plant productivity in tundra ecosystems but plant access to N is expected improve as decomposition increases in speed and extends to deeper soil horizons. To evaluate the relationship between permafrost thaw and N availability, we monitored N cycling during 5 years of experimentally induced permafrost thaw at the Carbon in Permafrost Experimental Heating Research (CiPEHR) project. Inorganic N availability increased significantly in response to deeper thaw and greater soil moisture induced by Soil warming. This treatment also prompted a 23% increase in aboveground biomass and a 49% increase in foliar N pools. The sedge Eriophorum vaginatum responded most strongly to warming: this species explained 91% of the change in aboveground biomass during the 5 year period. Air warming had little impact when applied alone, but when applied in combination with Soil warming, growing season soil inorganic N availability was significantly reduced. These results demonstrate that there is a strong positive relationship between the depth of permafrost thaw and N availability in tundra ecosystems but that this relationship can be diminished by interactions between increased thaw, warmer air temperatures, and higher levels of soil moisture. Within 5 years of permafrost thaw, plants actively incorporate newly available N into biomass but C storage in live vascular plant biomass is unlikely to be greater than losses from deep soil C pools. © 2015 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4132121','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4132121"><span>Rising CO2 Levels Will Intensify Phytoplankton Blooms in Eutrophic and Hypertrophic Lakes</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Verspagen, Jolanda M. H.; Van de Waal, Dedmer B.; Finke, Jan F.; Visser, Petra M.; Van Donk, Ellen; Huisman, Jef</p> <p>2014-01-01</p> <p>Harmful algal blooms threaten the water quality of many eutrophic and hypertrophic lakes and cause severe ecological and economic damage worldwide. Dense blooms often deplete the dissolved CO2 concentration and raise pH. Yet, quantitative prediction of the feedbacks between phytoplankton growth, CO2 drawdown and the inorganic carbon chemistry of aquatic ecosystems has received surprisingly little attention. Here, we develop a mathematical model to predict dynamic changes in dissolved inorganic carbon (DIC), pH and alkalinity during phytoplankton bloom development. We tested the model in chemostat experiments with the freshwater cyanobacterium Microcystis aeruginosa at different CO2 levels. The experiments showed that dense blooms sequestered large amounts of atmospheric CO2, not only by their own biomass production but also by inducing a high pH and alkalinity that enhanced the capacity for DIC storage in the system. We used the model to explore how phytoplankton blooms of eutrophic waters will respond to rising CO2 levels. The model predicts that (1) dense phytoplankton blooms in low- and moderately alkaline waters can deplete the dissolved CO2 concentration to limiting levels and raise the pH over a relatively wide range of atmospheric CO2 conditions, (2) rising atmospheric CO2 levels will enhance phytoplankton blooms in low- and moderately alkaline waters with high nutrient loads, and (3) above some threshold, rising atmospheric CO2 will alleviate phytoplankton blooms from carbon limitation, resulting in less intense CO2 depletion and a lesser increase in pH. Sensitivity analysis indicated that the model predictions were qualitatively robust. Quantitatively, the predictions were sensitive to variation in lake depth, DIC input and CO2 gas transfer across the air-water interface, but relatively robust to variation in the carbon uptake mechanisms of phytoplankton. In total, these findings warn that rising CO2 levels may result in a marked intensification of phytoplankton blooms in eutrophic and hypertrophic waters. PMID:25119996</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/1389519','SCIGOV-DOEDE'); return false;" href="https://www.osti.gov/servlets/purl/1389519"><span>Soil Organic Carbon Sequestration by Tillage and Crop Rotation: A Global Data Analysis</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/dataexplorer">DOE Data Explorer</a></p> <p>West, Tristram O. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Post, Wilfred M. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)</p> <p>2002-01-01</p> <p>Changes in agricultural management can potentially increase the accumulation rate of soil organic carbon (SOC), thereby sequestering CO2 from the atmosphere. This study was conducted to quantify potential soil carbon (C) sequestration rates for different crops in response to decreasing tillage intensity or enhancing rotation complexity, and to estimate the duration of time over which sequestration may occur. Analyses of C sequestration rates were completed using a global database of 67 long-term agricultural experiments, consisting of 276 paired treatments. Results indicate, on average, that a change from conventional tillage (CT) to no-till (NT) can sequester 57 ± 14 g C m<sup>–2</sup> yr<sup>–1</sup>, excluding wheat (Triticum aestivum L.)-fallow systems which may not result in SOC accumulation with a change from CT to NT. Enhancing rotation complexity can sequester an average 14 ± 11 g C m<sup>–2</sup> yr<sup>–1</sup>, excluding a change from continuous corn (Zea mays L.) to corn-soybean (Glycine max L.) which may not result in a significant accumulation of SOC. Carbon sequestration rates, with a change from CT to NT, can be expected to peak in 5-10 yr with SOC reaching a new equilibrium in 15-20 yr. Following initiation of an enhancement in rotation complexity, SOC may reach a new equilibrium in approximately 40-60 yr. Carbon sequestration rates, estimated for a number of individual crops and crop rotations in this study, can be used in spatial modeling analyses to more accurately predict regional, national, and global C sequestration potentials.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23712009','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23712009"><span>The Chinese Grain for Green Programme: assessing the carbon sequestered via land reform.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Persson, Martin; Moberg, Jesper; Ostwald, Madelene; Xu, Jintao</p> <p>2013-09-15</p> <p>The Grain for Green Programme (GGP) was launched in China in 1999 to control erosion and increase vegetation cover. Budgeted at USD 40 billion, GGP has converted over 20 million hectares of cropland and barren land into primarily tree-based plantations. Although GGP includes energy forests, only a negligible part (0.6%) is planted as such, most of the land (78%) being converted for protection. Future use of these plantations is unclear and an energy substitution hypothesis is valid. We estimate the overall carbon sequestration via GGP using official statistics and three approaches, based on i) net primary production, ii) IPCC's greenhouse gas inventory guidelines, and iii) mean annual increment. We highlight uncertainties associated with GGP and the estimates. Results indicate that crop- and barren-land conversion sequestered 222-468 Mt of carbon over GGP's first ten years, the IPCC approach yielding the highest estimate and the other two approaches yielding similar but lower estimates (approximately 250 Mt of carbon). The carbon stock in these plantation systems yields a mean of 12.3 t of carbon per hectare. Assessment uncertainties concern the use of growth curves not designed for particular species and locations, actual plantation survival rates, and discrepancies in GGP figures (e.g., area, type, and survival rate) at different authority levels (from national to local). The carbon sequestered in above- and below-ground biomass from GGP represents 14% (based on the median of the three approaches) of China's yearly (2009) carbon dioxide emissions from fossil fuel use and cement production. Copyright © 2013 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/22239684-actin-sequestering-protein-thymosin-regulates-activity-myocardin-related-transcription-factor','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/22239684-actin-sequestering-protein-thymosin-regulates-activity-myocardin-related-transcription-factor"><span>G-actin sequestering protein thymosin-β4 regulates the activity of myocardin-related transcription factor</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Morita, Tsuyoshi, E-mail: tsuyo@nbiochem.med.osaka-u.ac.jp; Hayashi, Ken’ichiro</p> <p>2013-08-02</p> <p>Highlights: •Tβ4 competed with MRTF-A for G-actin binding. •Tβ4 activated the MRTF–SRF signaling pathway. •Tβ4 increased the endogenous expression of SRF-dependent genes. -- Abstract: Myocardin-related transcription factors (MRTFs) are robust coactivators of serum response factor (SRF). MRTFs contain three copies of the RPEL motif at their N-terminus, and they bind to monomeric globular actin (G-actin). Previous studies illustrate that G-actin binding inhibits MRTF activity by preventing the MRTFs nuclear accumulation. In the living cells, the majority of G-actin is sequestered by G-actin binding proteins that prevent spontaneous actin polymerization. Here, we demonstrate that the most abundant G-actin sequestering protein thymosin-β4more » (Tβ4) was involved in the regulation of subcellular localization and activity of MRTF-A. Tβ4 competed with MRTF-A for G-actin binding; thus, interfering with G-actin–MRTF-A complex formation. Tβ4 overexpression induced the MRTF-A nuclear accumulation and activation of MRTF–SRF signaling. The activation rate of MRTF-A by the Tβ4 mutant L17A, whose affinity for G-actin is very low, was lower than that by wild-type Tβ4. In contrast, the β-actin mutant 3DA, which has a lower affinity for Tβ4, more effectively suppressed MRTF-A activity than wild-type β-actin. Furthermore, ectopic Tβ4 increased the endogenous expression of SRF-dependent actin cytoskeletal genes. Thus, Tβ4 is an important MRTF regulator that controls the G-actin–MRTFs interaction.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27520820','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27520820"><span>Probiotic Lactobacillus rhamnosus Reduces Organophosphate Pesticide Absorption and Toxicity to Drosophila melanogaster.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Trinder, Mark; McDowell, Tim W; Daisley, Brendan A; Ali, Sohrab N; Leong, Hon S; Sumarah, Mark W; Reid, Gregor</p> <p>2016-10-15</p> <p>Organophosphate pesticides used in agriculture can pose health risks to humans and wildlife. We hypothesized that dietary supplementation with Lactobacillus, a genus of commensal bacteria, would reduce absorption and toxicity of consumed organophosphate pesticides (parathion and chlorpyrifos [CP]). Several Lactobacillus species were screened for toleration of 100 ppm of CP or parathion in MRS broth based on 24-h growth curves. Certain Lactobacillus strains were unable to reach stationary-phase culture maxima and displayed an abnormal culture morphology in response to pesticide. Further characterization of commonly used, pesticide-tolerant and pesticide-susceptible, probiotic Lactobacillus rhamnosus strain GG (LGG) and L. rhamnosus strain GR-1 (LGR-1), respectively, revealed that both strains could significantly sequester organophosphate pesticides from solution after 24-h coincubations. This effect was independent of metabolic activity, as L. rhamnosus GG did not hydrolyze CP and no difference in organophosphate sequestration was observed between live and heat-killed strains. Furthermore, LGR-1 and LGG reduced the absorption of 100 μM parathion or CP in a Caco-2 Transwell model of the small intestine epithelium. To determine the effect of sequestration on acute toxicity, newly eclosed Drosophila melanogaster flies were exposed to food containing 10 μM CP with or without supplementation with live LGG. Supplementation with LGG simultaneously, but not with administration of CP 3 days prior (prophylactically), mitigated CP-induced mortality. In summary, the results suggest that L. rhamnosus may be useful for reducing toxic organophosphate pesticide exposure via passive binding. These findings could be transferable to clinical and livestock applications due to affordability and practical ability to supplement products with food-grade bacteria. The consequences of environmental pesticide pollution due to widespread usage in agriculture and soil leaching are becoming a major societal concern. Although the long-term effects of low-dose pesticide exposure for humans and wildlife remain largely unknown, logic suggests that these chemicals are not aligned with ecosystem health. This observation is most strongly supported by the agricultural losses associated with honeybee population declines, known as colony collapse disorder, in which pesticide usage is a likely trigger. Lactobacilli are bacteria used as beneficial microorganisms in fermented foods and have shown potentials to sequester and degrade environmental toxins. This study demonstrated that commonly used probiotic strains of lactobacilli could sequester, but not metabolize, organophosphate pesticides (parathion and chlorpyrifos). This Lactobacillus-mediated sequestration was associated with decreased intestinal absorption and insect toxicity in appropriate models. These findings hold promise for supplementing human, livestock, or apiary foods with probiotic microorganisms to reduce organophosphate pesticide exposure. Copyright © 2016, American Society for Microbiology. All Rights Reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFMEP43A1864H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFMEP43A1864H"><span>Geomorphic and habitat response to a large-dam removal in a Mediterranean river</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Harrison, L.; East, A. E.; Smith, D. P.; Bond, R.; Logan, J. B.; Nicol, C.; Williams, T.; Boughton, D. A.; Chow, K.</p> <p>2017-12-01</p> <p>The presence of large dams has fundamentally altered physical and biological processes in riverine ecosystems, and dam removal is becoming more common as a river restoration strategy. We used a before-after-control-impact study design to investigate the geomorphic and habitat response to removal of 32-m-high San Clemente Dam on the Carmel River, CA. The project represents the first major dam removal in a Mediterranean river and is also unique among large dam removals in that most reservoir sediment was sequestered in place. We found that in the first year post-removal, a sediment pulse migrated 3.5 km downstream, filling pools and the interstitial pore spaces of gravels with sand. These sedimentary and topographic changes initially reduced the overall quality of steelhead (O. mykiss) spawning and rearing habitat in impacted reaches. Over the second winter after dam removal, a sequence of high flows flushed large volumes of sand from pools and mobilized the river bed throughout much of the active channel. The floods substantially altered fluvial evolution in the upper part of the reservoir, promoting new avulsion and the subsequent delivery of gravel and large wood to below dam reaches. These geomorphic processes increased the availability of spawning-sized gravel and enhanced channel complexity in reaches within several km of the former dam, which should improve habitat for multiple life stages of steelhead. Results indicate that when most reservoir sediment remains impounded, high flows become more important drivers of geomorphic and habitat change than dam removal alone. In such cases, the rates at which biophysical processes are reestablished will depend largely on post-dam removal flow sequencing and the upstream supply of sediment and large wood.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=62203&Lab=NRMRL&keyword=phytoremediation&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=62203&Lab=NRMRL&keyword=phytoremediation&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>PHYTOTECHNOLOGIES IN THE UNITED STATES: GROWING SOLUTIONS TO ENVIRONMENTAL CHALLENGES</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Phytotechnology may be defined as the use of plants to contain, sequester, remove, or degrade organic and inorganic contaminants in soils, sediments, surface water, and groundwater. Mechanisms employed by the plant community may include transpiration (phytovolatilization), plant...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017EGUGA..1915222S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017EGUGA..1915222S"><span>The soil carbon dilemma in the humid tropics: cannot hoard it!?</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Sommer, Rolf; Paul, Birthe; Kihara, Job</p> <p>2017-04-01</p> <p>As Albrecht (1938) wrote some 70 years ago: "[Soil] Organic matter functions mainly as it is decayed and destroyed. Its value lies in its dynamic nature." Thus, by merely hoarding rather than using soil organic matter (SOM; compare also Janzen, 2006) with the aim to sequester carbon (C) in soils, we risk neglecting the crucial aspect that decomposing SOM and the release of nutrients (and concurrently CO2) is the basis for a healthy crop, decent yields and thus food security. This is even more true so in the tropics, where the majority of soils have low intrinsic fertility. In the absence of sufficient nutrient inputs through fertilizers in smallholder subsistence agriculture predominating e.g. in sub-Saharan Africa (SSA), SOM turnover is the key driver of crop productivity. On the other hand, humid tropical conditions - high temperatures and long periods of moist conditions - are very conducive to SOM decay. Therefore, maintaining SOM levels requires the constant input of significant amounts of organic matter; material that is often in low supply while then first of all used as animal feed in SSA mixed-crop livestock systems. In this context it is not surprising that for SSA very few studies so far have been published that showcased viable agronomic management systems that did also sequester notable C in the soil. The two long-term trials of the International Center for Tropical Agriculture (CIAT) in Western Kenya are no exception. Neither Conservation Agriculture (CA) nor Integrated Soil Fertility Management (ISFM) management practices over a period of 12 years could prevent the topsoil from losing C. But, these two practices could significantly slow down C losses in comparison to treatments representing common farmer practice. Also in comparison to the latter, yields of CA and ISFM plots were 2-4 time higher. This example shows that hoarding SOM in soils under humid tropical conditions is a challenge, and to attain amounts required to come even close to the 4p1000 C-sequestration targets are (yet?) make-believe. However, using SOM, while replenishing losses as much as possible, provides for a notable increase in soil fertility and crop yields while - as a co-benefit - reducing carbon emissions from these systems. The presentation will discuss this dilemma and elaborate on the pros and cons of alternatively using soil organic carbon emission intensities - analogous to the concept of greenhouse gas emissions intensities from livestock, which could be a smarter way of assessing the climate footprint of smallholder agricultural systems in the tropics. ========== Albrecht, W.A., 1938. Loss of soil organic matter and its restoration. In: United States Department of Agriculture, Soils and Men: Yearbook of Agriculture 1938. US Government Printing Office, pp. 347-360 Janzen, H.H. 2006. The soil carbon dilemma: Shall we hoard it or use it? Soil Biology & Biochemistry 38, 419-424.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2009AGUFM.B52A..04W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2009AGUFM.B52A..04W"><span>Impacts of Colonial Deforestation on Sediment Organic Carbon Fluxes and Budget Using Black Carbon Chronology: Waiapu Continental Shelf, New Zealand</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Wadman, H. M.; Canuel, E. A.; Bauer, J. E.; McNinch, J. E.</p> <p>2009-12-01</p> <p>Small, mountainous rivers deliver a disproportionate amount of sediment and associated organic matter to coastal regions globally. The Waiapu River, North Island, New Zealand, is characterized by one of the highest sediment yields on earth, providing a model system for studying episodic delivery and preservation of sedimentary organic matter in an energetic, aggradational setting. Hyperpycnal plumes provide the primary mode of sediment delivery, depositing fine-grained sediment as flood layers on the inner shelf. Severe erosion following colonial-era (~1890-1920) slash and burn deforestation increased the sediment yield to the shelf 4- to 5-fold relative to previous levels. Colonial catchment-wide burning also produced black carbon (BC), which may be used to establish chronological control in the heterogeneous inner shelf sediments that are not easily dateable using traditional techniques. While recent work indicates that these inner shelf flood layers sequester ~16-34% of the total fine-grained sediment budget, comparable to the amount preserved on the mid-outer shelf, little is understood about the organic matter associated with these inner shelf sediments. High-resolution seismic reflection data were used to select four representative cores to characterize total sedimentary BC, total organic carbon (TOC) and total nitrogen (TN) sequestered in the inner shelf fine-grained sediments. Soot and graphitic BC (SGBC) was quantified using chemo-thermal oxidation (CTO-375), while coarse-grained BC (CGBC) was quantified using traditional point-counting methodologies. SGBC weight percentages ranged from ~0.01-0.07, and peaked at ~150cm depth in all four cores. This interval corresponds to peak abundance of CGBC as well. The ~150cm interval is interpreted to represent the height of colonial slash and burn deforestation, and is further supported by fining-upward sequences in all of the cores as well as by multiple 14C dates. Overall, SGBC represented an average of 29% (range 7-75%) of the TOC throughout the cores, with the highest levels found in the deforestation layer at ~150cm (average 44%, range 30-75%). A secondary increase in % SGBC was found in the upper 50cm of the cores and is interpreted as increasing global BC production by diesel combustion in the 1970s. TOC and TN weight percentages associated with the fine-sediment fraction did not differ markedly above and below the deforestation layer. TOC and TN associated with the bulk sediment, however, did show increases in weight percent above ~150cm. This suggests that either 1) increases in fine-grained sedimentary organic material associated with the recent increase in sediment yield have been effectively remineralized, or 2) sedimentary organic matter is bimodal in origin (recent plant material vs. ancient, bedrock-derived carbon), and size-related variations in catchment and burial dynamics are influencing the fate of the different size fractions of organic material.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016EGUGA..1815310L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016EGUGA..1815310L"><span>Black Nitrogen as a source for the built-up of microbial biomass in soils</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>López-Martín, María; Milter, Anja; Knicker, Heike</p> <p>2016-04-01</p> <p>In areas with frequent wildfires, soil organic nitrogen (SON) is sequestered in pyrogenic organic matter (PyOM) due to heat-induced transformation of proteinaceous compounds into N-heterocycles, i.e. pyrrole, imidazole and indole compounds. These newly formed structures, known as Black Nitrogen (BN), have been assumed to be hardly degradable by microorganisms, thus being efficiently sequestered from the N cycle. On the other hand, a previous study showed that nitrogen of BN can be used by plants for the built-up of their biomass (de la Rosa and Knicker 2011). Thus, BN may play an important role as an N source during the recovery of the forest after a fire event. In order to obtain a more profound understanding of the role of BN within the N cycle in soils, we studied the bioavailability and incorporation of N derived from PyOM into microbial amino acids. For that, pots with soil from a burnt and an unburnt Cambisol located under a Mediterranean forest were covered with different amendments. The toppings were mixtures of unlabeled KNO3 with 15N labeled grass or 15N-labeled PyOM from burned grass and K15NO3 mixed with unlabeled grass material or PyOM. The pots were kept in the greenhouse under controlled conditions for 16 months and were sampled after 0.5, 1, 5, 8 and 16 months. From all samples the amino acids were extracted after hydrolysis (6 M HCl, 22 h, 110 °C) and quantified via gas chromatography mass spectrometry (GC/MS). The fate of 15N was followed by isotopic ratio mass spectrometry (IRMS). The results show that the contribution of extractable amino acids to total soil organic matter was always higher in the unburnt than in the burnt soil. However, with ongoing incubation their amount decreased. Already after 0.5 months, some PyOM-derived 15N was incorporated into the extractable amino acids and the amount increased with experiment time. Since this can only occur after prior microbial degradation of PyOM our results clearly support a lower biochemical recalcitrance of N-rich charred residues than formerly assumed. Our experiment demonstrated further that aside from being incorporated into plants (de la Rosa and Knicker 2011) the release PyOM-N can also be used for the built-up of new microbial biomass. ACKNOWLEDGEMENT The Ministerio de Economía y competitividad de España, the European Regional Development Fund (ERDF) and the IHSS Training Award are acknowledged for financial support of the project (CGL2009-10557) and the travel and stay of the María López Martín at the Helmholtz Center for Environmental Research UFZ. The latter is thanked greatly for hosting the awardee. REFERENCES de la Rosa, J. M. and H. Knicker (2011). "Bioavailability of N released from N-rich pyrogenic organic matter: An incubation study." Soil Biology and Biochemistry 43(12): 2368-2373.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22892174','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22892174"><span>Analysis of the production and transaction costs of forest carbon offset projects in the USA.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Galik, Christopher S; Cooley, David M; Baker, Justin S</p> <p>2012-12-15</p> <p>Forest carbon offset project implementation costs, comprised of both production and transaction costs, could present an important barrier to private landowner participation in carbon offset markets. These costs likewise represent a largely undocumented component of forest carbon offset potential. Using a custom spreadsheet model and accounting tool, this study examines the implementation costs of different forest offset project types operating in different forest types under different accounting and sampling methodologies. Sensitivity results are summarized concisely through response surface regression analysis to illustrate the relative effect of project-specific variables on total implementation costs. Results suggest that transaction costs may represent a relatively small percentage of total project implementation costs - generally less than 25% of the total. Results also show that carbon accounting methods, specifically the method used to establish project baseline, may be among the most important factors in driving implementation costs on a per-ton-of-carbon-sequestered basis, dramatically increasing variability in both transaction and production costs. This suggests that accounting could be a large driver in the financial viability of forest offset projects, with transaction costs likely being of largest concern to those projects at the margin. Copyright © 2012 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016EGUGA..18..140K','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016EGUGA..18..140K"><span>Dynamics of soil carbon stocks due to large-scale land use changes across the former Soviet Union during the 20th century</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Kurganova, Irina; Prishchepov, Alexander V.; Schierhorn, Florian; Lopes de Gerenyu, Valentin; Müller, Daniel; Kuzyakov, Yakov</p> <p>2016-04-01</p> <p>Land use change is a major driver of land-atmosphere carbon (C) fluxes. The largest net C fluxes caused by LUC are attributed to the conversion of native unmanaged ecosystems to croplands and vice versa. Here, we present the changes of soil organic carbon (SOC) stocks in response to large-scale land use changes in the former Soviet Union from 1953-2012. Widespread and rapid conversion of native ecosystems to croplands occurred in the course of the Virgin Lands Campaign (VLC) between 1954 to 1963 in the Soviet Union, when more than 45 million hectares (Mha) were ploughed in south-eastern Russia and northern Kazakhstan in order to expand domestic food production. After 1991, the collapse of the Soviet Union triggered the abandonment of around 75 Mha across the post-Soviet states. To assess SOC dynamics, we generated a static cropland mask for 2009 based on three global cropland maps. We used the cropland mask to spatially disaggregate annual sown area statistics at province level based on the suitability of each plot for crop production, which yielded land use maps for each year from 1954 to 2012 for all post-Soviet states. To estimate the SOC-dynamics due to the VLC and post-Soviet croplands abandonment, we used available experimental data, own field measurements, and soil maps. A bookkeeping approach was applied to assess the total changes in SOC-stocks in response to large-scale land use changes in the former Soviet Union. The massive croplands expansion during VLC resulted in a substantial loss of SOC - 611±47 Mt C and 241±11 Mt C for the upper 0-50 cm soil layer during the first 20 years of cultivation for Russia and Kazakhstan, respectively. These magnitudes are similar to C losses due to the plowing up of the prairies in USA in the mid-1930s. The total SOC sequestration due to post-Soviet croplands abandonment was estimated at 72.2±6.0 Mt C per year from 1991 to 2010. This amount of carbon equals about 40% of the current fossil fuel emission for this territory or about 7% of global C loss due to land-use change. However, recent recultivation of abandoned croplands in Russia and Kazakhstan can lead to release more labile forms of SOC stored on abandoned lands during last two decades. Since 2001, about 80 Mt of new sequestered SOC has been lost due to current programs on agricultural development in Russia and Kazakhstan. Our results demonstrate the large effects of land-use policies and institutional changes for the national and global C budgets during the last century.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=66122&Lab=NCER&keyword=phytoremediation&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=66122&Lab=NCER&keyword=phytoremediation&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>AGRONOMIC OPTIMIZATION FOR PHYTOREMEDIATION OF POLYCYCLIC AROMATIC HYDROCARBONS</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p><p>Phytoremediation is a low-cost method of using plants to degrade, volatilize or sequester organic and metal pollutants that has been used in efforts to remediate sites contaminated with polycyclic aromatic hydrocarbon (PAH) refinery wastes. Non-native plant species aggressivel...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.ars.usda.gov/research/publications/publication/?seqNo115=301440','TEKTRAN'); return false;" href="http://www.ars.usda.gov/research/publications/publication/?seqNo115=301440"><span>Biochar</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ars.usda.gov/research/publications/find-a-publication/">USDA-ARS?s Scientific Manuscript database</a></p> <p></p> <p></p> <p>Biochar, a carbonaceous material produced by pyrolysis, can be used as soil amendment to improve soil properties. As some of the carbon is converted into a recalcitrant form rendering it more resistant to biodegradation, land application of biochar is promoted as a beneficial mean for carbon sequest...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.ars.usda.gov/research/publications/publication/?seqNo115=276321','TEKTRAN'); return false;" href="http://www.ars.usda.gov/research/publications/publication/?seqNo115=276321"><span>Assessment of autophagosome formation by transmission electron microscopy</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ars.usda.gov/research/publications/find-a-publication/">USDA-ARS?s Scientific Manuscript database</a></p> <p></p> <p></p> <p>Autophagy is a complex degradative process by which cytosolic material, including organelles, is randomly sequestered within double-membrane bound vesicles termed autophagosomes and targeted for degradation. Initially described as a nutrient stress adaptation response, the process of autophagy is n...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/FR-2010-02-10/pdf/2010-2812.pdf','FEDREG'); return false;" href="https://www.gpo.gov/fdsys/pkg/FR-2010-02-10/pdf/2010-2812.pdf"><span>75 FR 6539 - Healthy Forests Reserve Program</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.gpo.gov/fdsys/browse/collection.action?collectionCode=FR">Federal Register 2010, 2011, 2012, 2013, 2014</a></p> <p></p> <p>2010-02-10</p> <p>... species, sustains biodiversity, protects watersheds, sequesters carbon, and helps purify the air. However... fragmentation, reduction in periodic fires, lack of proper management, or invasive species. Habitat loss has... for species that have suffered significant population declines. Active management and protection of...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.ars.usda.gov/research/publications/publication/?seqNo115=232058','TEKTRAN'); return false;" href="http://www.ars.usda.gov/research/publications/publication/?seqNo115=232058"><span>Polysaccharides and Cellulose in the Design of Wound Healing Materials</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ars.usda.gov/research/publications/find-a-publication/">USDA-ARS?s Scientific Manuscript database</a></p> <p></p> <p></p> <p>Chronic Wound Dressings that Sequester Harmful Proteases: Traditionally the use of carbohydrate-based wound dressings including cotton, xerogels, charcoal cloth, alginates, chitosan and hydrogels, have afforded properties such as absorbency, ease of application and removal, bacterial protection, flu...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.ars.usda.gov/research/publications/publication/?seqNo115=228346','TEKTRAN'); return false;" href="http://www.ars.usda.gov/research/publications/publication/?seqNo115=228346"><span>Polysaccharides and cellulose in the design of wound healing materials</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ars.usda.gov/research/publications/find-a-publication/">USDA-ARS?s Scientific Manuscript database</a></p> <p></p> <p></p> <p>1. Chronic Wound Dressings that Sequester Harmful Proteases: Traditionally the use of carbohydrate-based wound dressings including cotton, xerogels, charcoal cloth, alginates, chitosan and hydrogels, have afforded properties such as absorbency, ease of application and removal, bacterial protection, ...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015PhDT.......191H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015PhDT.......191H"><span>Development of Carbon Sequestration Options by Studying Carbon Dioxide-Methane Exchange in Hydrates</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Horvat, Kristine Nicole</p> <p></p> <p>Gas hydrates form naturally at high pressures (>4 MPa) and low temperatures (<4 °C) when a set number of water molecules form a cage in which small gas molecules can be entrapped as guests. It is estimated that about 700,000 trillion cubic feet (tcf) of methane (CH4) exist naturally as hydrates in marine and permafrost environments, which is more than any other natural sources combined as CH4 hydrates contain about 14 wt% CH4. However, a vast amount of gas hydrates exist in marine environments, which makes gas extraction an environmental challenge, both for potential gas losses during extraction and the potential impact of CH4 extraction on seafloor stability. From the climate change point of view, a 100 ppm increase in atmospheric carbon dioxide (CO2) levels over the past century is of urgent concern. A potential solution to both of these issues is to simultaneously exchange CH4 with CO 2 in natural hydrate reserves by forming more stable CO2 hydrates. This approach would minimize disturbances to the host sediment matrix of the seafloor while sequestering CO2. Understanding hydrate growth over time is imperative to prepare for large scale CH4 extraction coupled with CO2 sequestration. In this study, we performed macroscale experiments in a 200 mL high-pressure Jerguson cell that mimicked the pressure-temperature conditions of the seafloor. A total of 13 runs were performed under varying conditions. These included the formation of CH4 hydrates, followed by a CO2 gas injection and CO2 hydrate formation followed by a CH4 gas injection. Results demonstrated that once gas hydrates formed, they show "memory effect" in subsequent charges, irrespective of the two gases injected. This was borne out by the induction time data for hydrate formation that reduced from 96 hours for CH4 and 24 hours for CO2 to instant hydrate formation in both cases upon injection of a secondary gas. During the study of CH4-CO2 exchange where CH4 hydrates were first formed and CO2 gas was injected into the system, gas chromatographic (GC) analysis of the cell indicated a pure CH4 gas phase, i.e., all injected CO2 gas entered the hydrate phase and remained trapped in hydrate cages for several hours, though over time some CO2 did enter the gas phase. Alternatively, during the CH 4-CO2 exchange study where CO2 hydrates were first formed, the injected CH4 initially entered the hydrate phase, but quickly gaseous CO2 exchanged with CH4 in hydrates to form more stable CO2 hydrates. These results are consistent with the better thermodynamic stability of CO2 hydrates, and this appears to be a promising method to sequester CO2 in natural CH4 hydrate matrices. The macroscale study described above was complemented by a microscale study to visualize hydrate growth. This first-of-its-kind in-situ study utilized the x-ray computed microtomography (CMT) technique to visualize microscale CO2, CH4, and mixed CH 4-CO2 hydrate growth phenomenon in salt solutions in the presence or absence of porous media. The data showed that under the experimental conditions used, pure CH4 formed CH4 hydrates as mostly spheres, while pure CO2 hydrates were more dendritic branches. Additionally, varying ratios of mixed CH4-CO2 hydrates were also formed that had needle-like growth. In porous media, CO2 hydrates grew, consistent with known growth models in which the solution was the sediment wetting phase. When glass beads and Ottawa sand were used as a host, the system exhibited pore-filling hydrate growth, while the presence of liquid CO2 and possible CO2 hydrates in Ottawa sand initially were pore-filling that over time transformed into a grain-displacing morphology. The data appears promising to develop a method that would supplant our energy supply by extracting CH4 from naturally occurring hydrates while CO2 is sequestered in the same formations.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li class="active"><span>22</span></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_22 --> <div id="page_23" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li class="active"><span>23</span></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="441"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2006NW.....93..114G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2006NW.....93..114G"><span>Decay of cacti and carbon cycling</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Garvie, Laurence A. J.</p> <p>2006-03-01</p> <p>Cacti contain large quantities of Ca-oxalate biominerals, with C derived from atmospheric CO2. Their death releases these biominerals into the environment, which subsequently transform to calcite via a monohydrocalcite intermediate. Here, the fate of Ca-oxalates released by plants in arid environments is investigated. This novel and widespread form of biomineralization has unexpected consequences on C cycling and calcite accumulation in areas with large numbers of cacti. The magnitude of this mineralization is revealed by studying the large columnar cactus Carnegiea gigantea (Engelm.) Britton and Rose in southwestern Arizona (locally called the saguaro). A large C. gigantea contains on the order of 1×105 g of the Ca-oxalate weddellite—CaC2O4·2H2O. In areas with high C. gigantea density, there is an estimated 40 g Catm m-2 sequestered in Ca-oxalates. Following the death of the plant, the weddellite transforms to calcite on the order to 10-20 years. In areas with high saguaro density, there is an estimated release of up to 2.4 g calcite m-2 year-1 onto the desert soil. Similar transformation mechanisms occur with the Ca-oxalates that are abundant in the majority of cacti. Thus, the total atmospheric C returned to the soil of areas with a high number density of cacti is large, suggesting that there may be a significant long-term accumulation of atmospheric C in these soils derived from Ca-oxalate biominerals. These findings demonstrate that plant decay in arid environments may have locally significant impacts on the Ca and inorganic C cycles.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/16453105','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/16453105"><span>Decay of cacti and carbon cycling.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Garvie, Laurence A J</p> <p>2006-03-01</p> <p>Cacti contain large quantities of Ca-oxalate biominerals, with C derived from atmospheric CO(2). Their death releases these biominerals into the environment, which subsequently transform to calcite via a monohydrocalcite intermediate. Here, the fate of Ca-oxalates released by plants in arid environments is investigated. This novel and widespread form of biomineralization has unexpected consequences on C cycling and calcite accumulation in areas with large numbers of cacti. The magnitude of this mineralization is revealed by studying the large columnar cactus Carnegiea gigantea (Engelm.) Britton and Rose in southwestern Arizona (locally called the saguaro). A large C. gigantea contains on the order of 1 x 10(5) g of the Ca-oxalate weddellite-CaC(2)O(4) x 2H(2)O. In areas with high C. gigantea density, there is an estimated 40 g C(atm) m(-2) sequestered in Ca-oxalates. Following the death of the plant, the weddellite transforms to calcite on the order to 10-20 years. In areas with high saguaro density, there is an estimated release of up to 2.4 g calcite m(-2) year(-1) onto the desert soil. Similar transformation mechanisms occur with the Ca-oxalates that are abundant in the majority of cacti. Thus, the total atmospheric C returned to the soil of areas with a high number density of cacti is large, suggesting that there may be a significant long-term accumulation of atmospheric C in these soils derived from Ca-oxalate biominerals. These findings demonstrate that plant decay in arid environments may have locally significant impacts on the Ca and inorganic C cycles.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28697380','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28697380"><span>Assessment of carbon sequestration potential of revegetated coal mine overburden dumps: A chronosequence study from dry tropical climate.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ahirwal, Jitendra; Maiti, Subodh Kumar</p> <p>2017-10-01</p> <p>Development of secondary forest as post-mining land use in the surface coal mining degraded sites is of high research interest due to its potential to sequester atmospheric carbon (C). The objectives of this study were to assess the improvement in mine soil quality and C sequestration potential of the post-mining reclaimed land with time. Hence, this study was conducted in reclaimed chronosequence sites (young, intermediate and old) of a large open cast coal project (Central Coal Fields Limited, Jharkhand, India) and results were compared to a reference forest site (Sal forest, Shorea robusta). Mine soil quality was assessed in terms of accretion of soil organic carbon (SOC), available nitrogen (N) and soil CO 2 flux along with the age of revegetation. After 14 years of revegetation, SOC and N concentrations increased three and five-fold, respectively and found equivalent to the reference site. Accretion of SOC stock was estimated to be 1.9 Mg C ha -1 year -1 . Total ecosystem C sequestered after 2-14 years of revegetation increased from 8 Mg C ha -1 to 90 Mg C ha -1 (30-333 Mg CO 2 ha -1 ) with an average rate of 6.4 Mg C ha -1 year -1 . Above ground biomass contributes maximum C sequestrate (50%) in revegetated site. CO 2 flux increased with age of revegetation and found 11, 33 and 42 Mg CO 2 ha -1 year -1 in younger, intermediate and older dumps, respectively. Soil respiration in revegetated site is more influenced by the temperature than soil moisture. Results of the study also showed that trees like, Dalbergia sissoo and Heterophragma adenophyllum should be preferred for revegetation of mine degraded sites. Copyright © 2017 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/pages/biblio/1377771-earth-battery','SCIGOV-DOEP'); return false;" href="https://www.osti.gov/pages/biblio/1377771-earth-battery"><span>Earth Battery</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/pages">DOE PAGES</a></p> <p>Buscheck, Thomas A.</p> <p>2015-12-01</p> <p>It’s the bane of renewable energy. No matter how efficient photovoltaic cells become or how much power a wind turbine can capture, someone will counter with, “What happens when the sun goes down and wind doesn’t blow?” And the person who poses that question uses it as an argument in favor of traditional baseload power. While it’s true that the way the electrical grid has developed in North America and Europe doesn’t lend itself to the start-and-stop, opportunistic nature of wind and solar, there are ways to meet the challenge. Electricity can be stored in batteries or water pumped uphillmore » into reservoirs when power generation exceeds demand, to be tapped when needed. Unfortunately, utility-scale battery storage is prohibitively expensive, and pumped hydro is possible only in particular geographic locations. What is needed is a large-scale, distributed, dispatchable energy storage system that can smooth out a renewable energy generation profile that changes by the minute as well as over the course of the day or the season. Colleagues from Lawrence Livermore National Laboratory, the Ohio State University (led by Jeffrey Bielicki), and the University of Minnesota (led by Jimmy Randolph), and I have developed a system that can do all that. What’s more, this system actually sequesters carbon dioxide—a gas implicated in global climate change—as part of its normal operation. Furthermore, we have modeled our system and found that, if it can be successfully demonstrated in the field, it could provide utility-scale diurnal and seasonal energy storage (many hundreds of MWe) and dispatchable power, while permanently sequestering CO 2 from industrial-scale fossil-energy power plants. Certainly, an energy storage system is only as clean or as green as the primary generation it’s working with. But it is going to be difficult to implement solar or wind power to a degree high enough to make a difference in global carbon dioxide emissions without utility-scale energy storage.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2112760','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2112760"><span>Studies on the in vivo sensitivity of spindle microtubules to calcium ions and evidence for a vesicular calcium-sequestering system</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p></p> <p>1981-01-01</p> <p>I microinjected calcium ions into echinoderm eggs during mitosis to determine the calcium sensitivity of microtubules (Mts) in vivo. Spindle birefringence (BR), a measure of the number of aligned Mts in the spindle, is locally, rapidly, and reversibly abolished by small volumes of microinjected CaCl2 (1 mM). Rapid return of BR is followed by anaphase, and subsequent divisions are normal. Similar doses of MgCl2, BaCl2, KCl, NaCl, pH buffers, distilled water, or vegetable oil have no effect on spindle BR, whereas large doses of such agents sometimes cause slow, uniform loss in BR over the course of a minute or more. Of the ions tested, only Sr++ causes effects comparable to Ca++. Ca-EGTA buffers, containing greater than micromolar free Ca++, abolishes BR in a manner similar to millimolar concentrations of injected CaCl2. Caffeine, a potent uncoupler of the Ca++-pump/ATPase of sarcoplasmic reticulum, causes a local, transient depression in spindle BR in the injected region. Finally, injection of potassium oxalate results in the formation of small, highly BR crystals, presumably CA- oxalate, in Triton-sensitive compartments in the cytoplasm. Taken together, these findings demonstrate that spindle Mts are sensitive to levels of free Ca++ in the physiological range, provide evidence for the existence of a strong cytoplasmic Ca++-sequestering system, and support the notion that Mt assembly and disassembly in local regions of the spindle may be orchestrated by local changes in the cytoplasmic free Ca++ concentration during mitosis. An appendix offers the design of a new chamber for immobilizing echinoderm eggs for injection, a new method for determining the volume of the injected solution, and a description of the microinjection technique, which was designed, but never fully described, by Hiramoto (Y. Hiramoto, Exp. Cell. Res., 1962, 27:416-426.). PMID:7194345</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26963623','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26963623"><span>Carbon Abatement and Emissions Associated with the Gasification of Walnut Shells for Bioenergy and Biochar Production.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Pujol Pereira, Engil Isadora; Suddick, Emma C; Six, Johan</p> <p>2016-01-01</p> <p>By converting biomass residue to biochar, we could generate power cleanly and sequester carbon resulting in overall greenhouse gas emissions (GHG) savings when compared to typical fossil fuel usage and waste disposal. We estimated the carbon dioxide (CO2) abatements and emissions associated to the concurrent production of bioenergy and biochar through biomass gasification in an organic walnut farm and processing facility in California, USA. We accounted for (i) avoided-CO2 emissions from displaced grid electricity by bioenergy; (ii) CO2 emissions from farm machinery used for soil amendment of biochar; (iii) CO2 sequestered in the soil through stable biochar-C; and (iv) direct CO2 and nitrous oxide (N2O) emissions from soil. The objective of these assessments was to pinpoint where the largest C offsets can be expected in the bioenergy-biochar chain. We found that energy production from gasification resulted in 91.8% of total C offsets, followed by stable biochar-C (8.2% of total C sinks), offsetting a total of 107.7 kg CO2-C eq Mg-1 feedstock. At the field scale, we monitored gas fluxes from soils for 29 months (180 individual observations) following field management and precipitation events in addition to weekly measurements within three growing seasons and two tree dormancy periods. We compared four treatments: control, biochar, compost, and biochar combined with compost. Biochar alone or in combination with compost did not alter total N2O and CO2 emissions from soils, indicating that under the conditions of this study, biochar-prompted C offsets may not be expected from the mitigation of direct soil GHG emissions. However, this study revealed a case where a large environmental benefit was given by the waste-to-bioenergy treatment, addressing farm level challenges such as waste management, renewable energy generation, and C sequestration.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4786142','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4786142"><span>Carbon Abatement and Emissions Associated with the Gasification of Walnut Shells for Bioenergy and Biochar Production</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Pujol Pereira, Engil Isadora; Suddick, Emma C.; Six, Johan</p> <p>2016-01-01</p> <p>By converting biomass residue to biochar, we could generate power cleanly and sequester carbon resulting in overall greenhouse gas emissions (GHG) savings when compared to typical fossil fuel usage and waste disposal. We estimated the carbon dioxide (CO2) abatements and emissions associated to the concurrent production of bioenergy and biochar through biomass gasification in an organic walnut farm and processing facility in California, USA. We accounted for (i) avoided-CO2 emissions from displaced grid electricity by bioenergy; (ii) CO2 emissions from farm machinery used for soil amendment of biochar; (iii) CO2 sequestered in the soil through stable biochar-C; and (iv) direct CO2 and nitrous oxide (N2O) emissions from soil. The objective of these assessments was to pinpoint where the largest C offsets can be expected in the bioenergy-biochar chain. We found that energy production from gasification resulted in 91.8% of total C offsets, followed by stable biochar-C (8.2% of total C sinks), offsetting a total of 107.7 kg CO2-C eq Mg-1 feedstock. At the field scale, we monitored gas fluxes from soils for 29 months (180 individual observations) following field management and precipitation events in addition to weekly measurements within three growing seasons and two tree dormancy periods. We compared four treatments: control, biochar, compost, and biochar combined with compost. Biochar alone or in combination with compost did not alter total N2O and CO2 emissions from soils, indicating that under the conditions of this study, biochar-prompted C offsets may not be expected from the mitigation of direct soil GHG emissions. However, this study revealed a case where a large environmental benefit was given by the waste-to-bioenergy treatment, addressing farm level challenges such as waste management, renewable energy generation, and C sequestration. PMID:26963623</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013AGUFMOS53A1683W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013AGUFMOS53A1683W"><span>The evolution of organic matter along the lower Amazon River continuum - Óbidos to the ocean</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Ward, N. D.; Keil, R. G.; Medeiros, P. M.; Brito, D.; Cunha, A.; Sawakuchi, H. O.; Moura, J. S.; Yager, P. L.; Krusche, A. V.; Richey, J. E.</p> <p>2013-12-01</p> <p>The influence of the Amazon River on global hydrologic and biogeochemical cycling is well recognized. The Amazon River provides roughly 16% of the global freshwater supply to the ocean and is a significant source of CO2 to the atmosphere, outgassing 0.5 Pg C y-1 to the atmosphere--a flux roughly equivalent to the amount of carbon 'sequestered' by the Amazon rainforest (Field et al, 1998; Richey et al., 2002; Malhi et al., 2008). However, much of our understanding of the flux of matter from the Amazon River into the Atlantic Ocean (and atmosphere) is limited to measurements made at and upstream of Óbidos, 900 km upstream from the actual river mouth. Further, there are few to no observations documenting the transformation of organic matter in a parcel of water as it travels downstream of Óbidos into the ocean. Here we explore the hydrological and biogeochemical evolution of the lower Amazon River continuum, from Óbidos to the Atlantic Ocean. A suite of dissolved and particulate organic matter (OM) parameters were measured during a series of five river expeditions with stations at Óbidos, the Tapajós tributary, the mouth of the Lago Grande de Curuai floodplain lake, both the north and south channels of the Amazon River mouth near Macapá, and the confluence of the Amazon and Tocantins Rivers near Belém. In addition to bulk carbon isotopic signatures, a suite of biomarkers including dissolved and particulate lignin-derived phenols were measured to trace the sources and degradation history of terrestrial vascular plant derived OM throughout the continuum. Dissolved and particulate lignin phenol concentrations both correlated positively with river discharge in the Amazon River mainstem, with variable export patterns from the tributaries and floodplains. As organic matter travels along the continuum it is degraded by microbial composition, fuelling gross respiration and CO2 outgassing. The flux of organic carbon to the ocean is chemically recalcitrant as a result of the constant biological processing of labile OM throughout the lower river. We estimate that 40% of the vascular plant-derived organic carbon sequestered by the terrestrial biosphere is degraded within soils, 55% is degraded along the river continuum, and less than 5% is delivered to the ocean (Ward et al., 2013) References Cited Field, C., M. Behrenfeld, J. Randerson, and P. Falkowski. 1998. Primary production of the biosphere: Integrating terrestrial and oceanic components. Science 281, 237-240. Malhi, Y., Roberts, J.T., Betts, R.A., Killeen, T.J., Li, W., Nobre, C.A. 2008. Climate change, deforestation, and the fate of the Amazon. Science 319, 169-172. Richey, J. E., Melack, J. M., Aufdenkampe, A. K., Ballester, V. M. & Hess, L. L. 2002. Outgassing from Amazonian rivers and wetlands as a large tropical source of atmospheric CO2. Nature 416, 617-620. Ward, N.D.; Keil, R.G.; Medeiros, P.M.; Brito, D.C.; Cunha, A.C.; Dittmar, T.; Yager, P.L.; Krusche, A.V.; Richey, J.E. 2013. Degradation of terrestrially derived macromolecules in the Amazon River. Nature Geoscience. doi: 10.1038/ngeo1817</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015EGUGA..1712947S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015EGUGA..1712947S"><span>Geochemical modelling of EGS fracture stimulation applying weak and strong acid treatments</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Sigfusson, Bergur; Sif Pind Aradottir, Edda</p> <p>2015-04-01</p> <p>Engineered Geothermal systems (EGS) provide geothermal power by tapping into the Earth's deep geothermal resources that are otherwise not exploitable due to lack of water and fractures, location or rock type. EGS technologies have the potential to cost effectively produce large amounts of electricity almost anywhere in the world. The EGS technology creates permeability in the rock by hydro-fracturing the reservoir with cold water pumped into the first well (the injection well) at a high pressure. The second well (the production well) intersects the stimulated fracture system and returns the hot water to the surface where electricity can be generated. A significant technological hurdle is ensuring effective connection between the wells and the fracture system and to control the deep-rooted fractures (can exceed 5 000 m depth). A large area for heat transfer and sufficient mass flow needs to be ensured between wells without creating fast flowing paths in the fracture network. Maintaining flow through the fracture system can cause considerable energy penalty to the overall process. Therefore, chemical methods to maintain fractures and prevent scaling can be necessary to prevent excessive pressure build up in the re-injection wells of EGS systems. The effect of different acid treatments on the porosity development of selected rock types was simulated with the aid of the Petrasim interface to the Toughreact simulation code. The thermodynamic and kinetic database of Aradottir et al. (2014) was expanded to include new minerals and the most important fluoride bearing species involved in mineral reactions during acid stimulation of geothermal systems. A series of simulations with injection waters containing fluoric acid, hydrochloric acid and CO2 or mixtures thereof were then carried out and porosity development in the fracture system monitored. The periodic injection of weak acid mixtures into EGS systems may be cost effective in some isolated cases to prevent pressure build-up and therefore lowering pumping costs during operation. Selection of the acid is though highly dependent on the chemistry of the reservoir in question. Reference Aradottir, E. S. P., Gunnarsson, I., Sigfusson, B., Gunnarsson, G., Juliusson, B. M., Gunnlaugsson, E., Sigurdardóttir, H., Arnarson, M. T., Sonnenthal, E., 2014. Toward Cleaner Geothermal Energy Utilization: Capturing and Sequestering CO2 and H2S Emissions from Geothermal Power Plants. Transport in Porous Media. DOI 10.1007s/11242-014-0316-5</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFMOS43B..02P','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFMOS43B..02P"><span>Relict thermokarst carbon source kept stable within gas hydrate stability zone of the South Kara Sea</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Portnov, A.; Mienert, J.; Winsborrow, M.; Vadakkepuliyambatta, S.; Semenov, P.</p> <p>2017-12-01</p> <p>Substantial shallow sources of carbon can exist in the South Kara Sea shelf, extending offshore from the permafrost areas of Yamal Peninsula and the Polar Ural coast. Our study presents new evidence for >250 buried relict thermokarst units. These amalgamated thawing wedges formed in the uppermost permafrost of the past and are still recognizable in today's non-permafrost areas. Part of these potential carbon reservoirs are kept stable within the South Kara Sea gas hydrate stability zone (GHSZ). We utilize an extensive 2D high-resolution seismic dataset, collected in the South Kara Sea in 2005-2006 by Marine Arctic Geological Expedition (MAGE), to map distinctive U-shaped units that are acoustically transparent. These units appear all over the study area in water depths 50-250 m. Created by thermal erosion into Cretaceous-Paleogene bedrock, they are buried under the younger glacio-marine deposits and reach hundreds of meters wide and up to 100 meters thick. They show the characteristics of relict thermokarst, generated during ancient episode(s) of sea level regression of the South Kara Sea. These thermokarst units are generally limited by the Upper Regional Unconformity, which is an erosional horizon created by several glaciation events during the Pleistocene. On land, permafrost is known to sequester large volumes of carbon, half of which is concentrated within thermokarst structures. Based on modern thermokarst analogues we demonstrate with our study that a significant amount of organic carbon can be stored under the Kara Sea. To assess the stability of these shallow carbon reservoirs we carried out GHSZ modeling, constrained by geochemical analyses, temperature measurements and precise bathymetry. This revealed a significant potential for a GHSZ in water depths >225 m. The relict thermokast carbon storage system is stable under today's extremely low bottom water temperatures ( -1.7 °C) that allows for buried GHSZ, located tens of meters below the seabed. Noteworthy, vast parts of GHSZ do not expose on the seafloor, since both upper and lower GHSZ boundaries occur clearly sub-seafloor. Our findings show that under the deepest regions of the South Kara Sea, large areas of relict thermokarst may presently exist within the GHSZ of unique configuration, and therefore provide substantial methane source for gas hydrate.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014EGUGA..1615254G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014EGUGA..1615254G"><span>Impacts of crop growth dynamics on soil quality at the regional scale</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Gobin, Anne</p> <p>2014-05-01</p> <p>Agricultural land use and in particular crop growth dynamics can greatly affect soil quality. Both the amount of soil lost from erosion by water and soil organic matter are key indicators for soil quality. The aim was to develop a modelling framework for quantifying the impacts of crop growth dynamics on soil quality at the regional scale with test case Flanders. A framework for modelling the impacts of crop growth on soil erosion and soil organic matter was developed by coupling the dynamic crop cover model REGCROP (Gobin, 2010) to the PESERA soil erosion model (Kirkby et al., 2009) and to the RothC carbon model (Coleman and Jenkinson, 1999). All three models are process-based, spatially distributed and intended as a regional diagnostic tool. A geo-database was constructed covering 10 years of crop rotation in Flanders using the IACS parcel registration (Integrated Administration and Control System). Crop allometric models were developed from variety trials to calculate crop residues for common crops in Flanders and subsequently derive stable organic matter fluxes to the soil. Results indicate that crop growth dynamics and crop rotations influence soil quality for a very large percentage. soil erosion mainly occurs in the southern part of Flanders, where silty to loamy soils and a hilly topography are responsible for soil loss rates of up to 40 t/ha. Parcels under maize, sugar beet and potatoes are most vulnerable to soil erosion. Crop residues of grain maize and winter wheat followed by catch crops contribute most to the total carbon sequestered in agricultural soils. For the same rotations carbon sequestration is highest on clay soils and lowest on sandy soils. This implies that agricultural policies that impact on agricultural land management influence soil quality for a large percentage. The coupled REGCROP-PESERA-ROTHC model allows for quantifying the impact of seasonal and year-to-year crop growth dynamics on soil quality. When coupled to a multi-annual crop rotation database both spatial and temporal analysis becomes possible and allows for decision support at both farm and regional level. The framework is therefore suited for further scenario analysis and impact assessment. The research is funded by the Belgian Science Policy Organisation (Belspo) under contract nr SD/RI/03A.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFMOS53B1200P','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFMOS53B1200P"><span>Along - Strike Analysis of Contemporary Ocean Temperature Change on the Cascadia Margin and Implications to Upper Slope Hydrate Instability</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Phrampus, B.; Harris, R. N.; Trehu, A. M.; Embley, R. W.; Merle, S. G.</p> <p>2017-12-01</p> <p>Gas hydrates are found globally on continental margins and due to the large amount of sequestered carbon in hydrate reservoirs, whether these deposits are dynamic or stable has significant implications for slope stability, ocean/atmosphere carbon budget, and deep-water energy exploration. Recent studies indicate that upper slope hydrate degradation may be relatively widespread on passive margins due to recent ocean temperature warming between 0.012 and 0.033 °C/yr (e.g. Svalbard, North Alaska, and US Atlantic margin). However, the potential and breadth of warming induced hydrate instability remains contentious based on multiple observations including: 1) seep locations not consistent with locations of hydrate dissociation, 2) a lack of hydrate in regions of warming, and 3) evidence for long-lived seepage in regions associated with contemporary warming-induced hydrate dissociation. At the Cascadia margin, a recent study suggests that contemporary warming of intermediate water intersects the hydrate stability zone leading to hydrate dissociation that feeds upper slope seeps. Here, we provide a systematic analysis of along-strike variations in hydrate distribution along the Cascadia margin combined with a multivariable regression of ocean temperatures to characterize the potential of upper slope hydrate instability. Preliminary seep locations reveal upper slope seeps and observed regions of hydrate are correlated spatially between 42.5 and 48.0 °N, outside this region there is a dearth of identified upper slope hydrate and seeps. Between 44.5 and 48.0 °N a contemporary warming trend is as large as 0.006 °C/yr and is collocated with upper slope hydrate and gas seepage. This warming rate is relatively small, 2-5x smaller than warming trends identified in the Arctic where temperature induced hydrate instability remains uncertain. Additionally, we identify a region between 42.5 and 44.5 °N with collocated upper slope seepage and hydrate but no evidence of ocean warming, suggesting upper slope seepage is not driven by temperature induced hydrate instability, but maybe driven by tectonic uplift. These results highlight the absence of temperature driven seepage and slope instability on the Cascadia margin and deemphasize the impact of lower latitude warming on global hydrate dynamics and carbon budget.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017EGUGA..1919451M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017EGUGA..1919451M"><span>CH_{4} production in the deep soil as a source of stem CH_{4} emission in Fagus sylvatica}</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Maier, Martin; Machacova, Katerina; Urban, Otmar; Lang, Friederike</p> <p>2017-04-01</p> <p>Predicting greenhouse gas (GHG) fluxes on a global scale requires understanding fluxes on the local scale. Understanding GHG processes in soil-plant-atmosphere systems is essential to understand and mitigate GHG fluxes on the local scale. Forests are known to act as carbon sink. Yet, trees at waterlogged sites are known to emit large amounts of CH4, what can offset the positive GHG balance due the CO2 that is sequestered as wood. Generally, upland trees like European beech (Fagus sylvatica L.) are assumed not to emit CH4, and the upland forest soils are regarded as CH4 sinks. Soil-atmosphere fluxes and stem-atmosphere fluxes of CH4 were studied together with soil gas profiles at two upland beech forest sites in Germany and Czech Republic. Soil was a net CH4 sink at both sites. While most trees showed no or low emissions, one beech tree had exorbitant CH4 emissions that were higher than the CH4 sink capacity of the soil. A soil survey showed strong redoximorphic color patterns in the soil adjacent to this tree. Although the soil around the tree was taking up CH4, the soil gas profiles around this tree showed CH4 production at a soil depth >0.3 m. We interpret the coincidence of the production of CH4 in the deep soil below the beech with the large stem emissions as strong hint that there is a transport link between the soil and stem. We think that the root system represents a preferential transport system for CH4 despite the fact that beech roots usually do not have a special gas transport tissue. The observed CH4 stem emissions represent an important CH4 flux in this ecosystem, and, thus, should be considered in future research. Acknowledgement This research was supported by the Czech Academy of Sciences and the German Academic Exchange Service within the project "Methane (CH4) and nitrous oxide (N2O) emissions from Fagus sylvatica trees" (DAAD-15-03), the Czech Science Foundation (17-18112Y), National Programme for Sustainability I (LO1415) and project DFG (MA 5826/2-1). We would like to thank Marek Jakubik, Sinikka Paulus, Ellen Halaburt and Sally Haddad for technical support.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/15007355','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/15007355"><span>NON-DESTRUCTIVE SOIL CARBON ANALYZER.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Wielopolski, Lucian; Hendrey, G.; Orion, I.</p> <p>2004-02-01</p> <p>This report describes the feasibility, calibration, and safety considerations of a non-destructive, in situ, quantitative, volumetric soil carbon analytical method based on inelastic neutron scattering (INS). The method can quantify values as low as 0.018 gC/cc, or about 1.2% carbon by weight with high precision under the instrument's configuration and operating conditions reported here. INS is safe and easy to use, residual soil activation declines to background values in under an hour, and no radiological requirements are needed for transporting the instrument. The labor required to obtain soil-carbon data is about 10-fold less than with other methods, and the instrumentmore » offers a nearly instantaneous rate of output of carbon-content values. Furthermore, it has the potential to quantify other elements, particularly nitrogen. New instrumentation was developed in response to a research solicitation from the U.S. Department of Energy (DOE LAB 00-09 Carbon Sequestration Research Program) supporting the Terrestrial Carbon Processes (TCP) program of the Office of Science, Biological and Environmental Research (BER). The solicitation called for developing and demonstrating novel techniques for quantitatively measuring changes in soil carbon. The report includes raw data and analyses of a set of proof-of-concept, double-blind studies to evaluate the INS approach in the first phase of developing the instrument. Managing soils so that they sequester massive amounts of carbon was suggested as a means to mitigate the atmospheric buildup of anthropogenic CO{sub 2}. Quantifying changes in the soils' carbon stocks will be essential to evaluating such schemes and documenting their performance. Current methods for quantifying carbon in soil by excavation and core sampling are invasive, slow, labor-intensive and locally destroy the system being observed. Newly emerging technologies, such as Laser Induced Breakdown Spectroscopy and Near-Infrared Spectroscopy, offer soil-carbon analysis; however, these also are invasive and destructive techniques. The INS approach permits quantification in a relatively large volume of soil without disrupting the measurement site. The technique is very fast and provides nearly instantaneous results thereby reducing the cost, and speeding up the rate of analysis. It also has the potential to cover large areas in a mobile scanning mode. These capabilities will significantly advance the tracking carbon sequestration and offer a tool for research in agronomy, forestry, soil ecology and biogeochemistry.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017EGUGA..19.5537V','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017EGUGA..19.5537V"><span>Urban soils as hotspots of anthropogenic carbon accumulation: Review of stocks, mechanisms and factors</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Vasenev, Viacheslav; Kuzyakov, Yakov</p> <p>2017-04-01</p> <p>Urban soils and cultural layers accumulate carbon (C) over centuries and consequently large C stocks are sequestered below the cities. These C stocks as well as the full range of processes and mechanisms leading to high C accumulation in urban soils remain unknown. We collected data on organic (SOC), inorganic (SOC) and black (pyrogenic) (BC) C content in urban and natural soils from 100 papers based on Scopus and Web-of-Knowledge databases. The yielded database includes 770 values on SOC, SIC and BC stocks from 118 cities worldwide. The collected data were analyzed considering the effects of climatic conditions and urban-specific factors: city size, age and functional zoning. For the whole range of climatic conditions, the C contents in urban soils were 1.5-3 times higher than in respective natural soils. This higher C content and much deeper C accumulation in urban soils resulted in 3 to 5 times higher C stocks compared to natural soils. Urban SOC stocks were positively correlated with latitude, whereas SIC stocks were less affected by climate. The city size and age were the main factors controlling intra-city variability of C stocks with higher stocks in small cities compared to megapolises and in medieval compared to new cities. The inter-city variability of C stocks was dominated by functional zoning: large SOC and N stocks in residential areas and large SIC and BC stocks in industrial zones and roadsides were similar for all climates and for cities of different size and age. Substantial stocks of SOC, SIC and N were sequestered for long-term in the subsoils and cultural layers of the sealed soils, which underline the importance of these 'hidden' stocks for C assessments. Typical and specific for urban soils is that the anthropogenic factor overshadows the other five factors of soil formation. Substantial C stocks in urban soils and cultural layers result from specific mechanisms of C accumulation in cities: i) large and long-term C inputs from outside the city (e.g. suburban, agricultural and forest areas), and ii) C accumulation in parallel with upward soil growing without complete mineralization (common in natural soils). These mechanisms result over long period in gradual growing-up of urban soils and C accumulation. The average rate of urban soils' uprising growth of 50 cm per century and the average SOC contents of 3-5% led conclude that urban soils accumulate 15-30 kg C m-2 per century without steady state (common for all natural soils). These factors lead to high potential of urban soils for long-term C sequestration. We conclude that despite small area under the cities, urban soils are hotspots of belowground long-term C sequestration worldwide and the importance of urban soils will increase in future with global urbanization.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://ntrs.nasa.gov/search.jsp?R=20020064474&hterms=Aldehydes+ketones&qs=N%3D0%26Ntk%3DAll%26Ntx%3Dmode%2Bmatchall%26Ntt%3DAldehydes%2Bketones','NASA-TRS'); return false;" href="https://ntrs.nasa.gov/search.jsp?R=20020064474&hterms=Aldehydes+ketones&qs=N%3D0%26Ntk%3DAll%26Ntx%3Dmode%2Bmatchall%26Ntt%3DAldehydes%2Bketones"><span>Measurements of Oxygenated Organic Chemicals In the Pacific Troposphere During TRACE-P: Higher Aldehydes (less than C(sub 1)), Their Sources, and Potential Role In Atmospheric Oxidation</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://ntrs.nasa.gov/search.jsp">NASA Technical Reports Server (NTRS)</a></p> <p>Singh, Hanwant B.; Salas, L.; Herlth, D.; Viezee, W.; Fried, A.; Jackob, D.; Blake, D.; Heikes, B.; Talbot, R.; Sachse, G.; <a style="text-decoration: none; " href="javascript:void(0); " onClick="displayelement('author_20020064474'); toggleEditAbsImage('author_20020064474_show'); toggleEditAbsImage('author_20020064474_hide'); "> <img style="display:inline; width:12px; height:12px; " src="images/arrow-up.gif" width="12" height="12" border="0" alt="hide" id="author_20020064474_show"> <img style="width:12px; height:12px; display:none; " src="images/arrow-down.gif" width="12" height="12" border="0" alt="hide" id="author_20020064474_hide"></p> <p>2002-01-01</p> <p>Airborne measurements of a large number of oxygenated organics were carried out in the Pacific troposphere (to 12 km) in the Spring of 2001 (Feb. 24-April 10). Specifically these measurements included acetaldehyde, propanaldehyde, acetone, methylethyl ketone, methanol, ethanol, PAM and organic nitrates. Independent measurements of formaldehyde, peroxides, and tracers were also available. Highly polluted as well as pristine air masses were sampled. Oxygenated organics were abundant in the clean In troposphere and were greatly enhanced in the outflow regions from Asia. Extremely high concentrations of aldehydes could be measured in the troposphere. It is not possible to explain the large abundances of aldehydes in the background troposphere without invoking significant oceanic sources. A strong correlation between the observed mixing ratios of formaldehyde and acetaldehyde is present. We infer that higher aldehydes (such as acetaldehyde and propanaldehyde) may provide a large source of formaldehyde and sequester Cox throughout the troposphere. The atmospheric behavior of acetone, methylethyl ketone, and methanol is generally indicative of their common terrestrial sources with a Image contribution from biomass/biofuel burning. A vast body of data has been collected and it is being analyzed both statistically and with the help of models to better understand the role that oxygenated organics play in the atmosphere and to unravel their sources and sinks. These results will be presented.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28589455','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28589455"><span>Terrestrially derived glomalin-related soil protein quality as a potential ecological indicator in a peri-urban watershed.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Sui, Xueyan; Wu, Zhipeng; Lin, Chen; Zhou, Shenglu</p> <p>2017-07-01</p> <p>Glomalin, which sequesters substantial amounts of carbon, plays a critical role in sustaining terrestrial biome functions and contributes to the fate of many pollutants from terrestrial to aquatic ecosystems. Despite having focused on the amount of glomalin produced, very few attempts have been made to understand how landscapes and environmental conditions influence glomalin composition and characteristics. This study focused on glomalin-related soil protein (GRSP) exported as storm runoff including eroded sediment and water that was collected before flowing to surface waters in a peri-urban watershed. GRSP characteristics were assessed by Bradford protein analysis, fluorescence spectroscopy combined with parallel factor analysis (PARAFAC), and the determination of aromaticity based on the specific ultraviolet absorption value (280 nm) and molecular weight. General linear models (GLMs) was established by integrating microbial activity, land cover, water temperature, precipitation, and other solution chemical properties to explain the variations in GRSP characteristics. Results showed that a higher GRSP concentration in agricultural reference sites was produced in the form of specific materials with low molecular weight and aromaticity, as well as high percentage of C1 and C5 components which indicate microbial-processed sources, relative to urbanized and forested sites. Compared with forested land, urbanized land clearly produced runoff GRSP with low molecular weight and aromaticity, as well as more degradation of humic-like materials (C3 component). The highest GLM explaining 89% of the variables, including significant variables (p < 0.05) such as microbial activity, water temperature, and water conductivity, was observed for GRSP characteristics. Therefore, changes in eroded soil GRSP quality can serve as an indicator for improving watershed management and thus protecting aquatic ecosystems.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4077815','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4077815"><span>Modulation of Phosphorylation of Tocopherol and Phosphatidylinositol by hTAP1/SEC14L2-Mediated Lipid Exchange</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Zingg, Jean-Marc; Libinaki, Roksan; Meydani, Mohsen; Azzi, Angelo</p> <p>2014-01-01</p> <p>The vitamin E derivative, alpha-tocopheryl phosphate (αTP), is detectable in cultured cells, plasma and tissues in small amounts, suggesting the existence of enzyme(s) with α-tocopherol (αT) kinase activity. Here, we characterize the production of αTP from αT and [γ-32P]-ATP in primary human coronary artery smooth muscle cells (HCA-SMC) using separation by thin layer chromatography (TLC) and subsequent analysis by Ultra Performance Liquid Chromatography (UPLC). In addition to αT, although to a lower amount, also γT is phosphorylated. In THP-1 monocytes, γTP inhibits cell proliferation and reduces CD36 scavenger receptor expression more potently than αTP. Both αTP and γTP activate the promoter of the human vascular endothelial growth factor (VEGF) gene with similar potency, whereas αT and γT had no significant effect. The recombinant human tocopherol associated protein 1 (hTAP1, hSEC14L2) binds both αT and αTP and stimulates phosphorylation of αT possibly by facilitating its transport and presentation to a putative αT kinase. Recombinant hTAP1 reduces the in vitro activity of the phosphatidylinositol-3-kinase gamma (PI3Kγ) indicating the formation of a stalled/inactive hTAP1/PI3Kγ heterodimer. The addition of αT, βT, γT, δT or αTP differentially stimulates PI3Kγ, suggesting facilitated egress of sequestered PI from hTAP1 to the enzyme. It is suggested that the continuous competitive exchange of different lipophilic ligands in hTAPs with cell enzymes and membranes may be a way to make these lipophiles more accessible as substrates for enzymes and as components of specific membrane domains. PMID:24983950</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017GGG....18..827X','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017GGG....18..827X"><span>The biokarst system and its carbon sinks in response to pH changes: A simulation experiment with microalgae</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Xie, Tengxiang; Wu, Yanyou</p> <p>2017-03-01</p> <p>This study aims to explore the changes in a microalgal biokarst system as a potential carbon sink system in response to pH changes. The bidirectional isotope labeling method and mass balance calculation were adopted in a simulated biokarst environment with a series of set pH conditions and three microalgal species. Three key processes of the microalgal biokarst system, including calcite dissolution, CaCO3 reprecipitation, and inorganic carbon assimilation by microalgae, were completely quantitatively described. The combined effects of chemical dissolution and species-specific biodissolution caused a decrease in overall dissolution rate when the pH increased from 7 to 9. CaCO3 reprecipitation and the utilization of dissolved inorganic carbon originating from calcite dissolution decreased when the pH increased from 7 to 9. The three processes exhibited different effects in changing the CO2 atmosphere. The amount of photosynthetic carbon sink was larger at high pH values than at low pH values. However, the CO2 sequestration related to the biokarst process (biokarst carbon sink) increased with decreasing pH. Overall, the total amount of sequestered CO2 produced by the biokarst system (CaCO3-CO2-microalgae) shows a minimum at a specific pH then increases with decreasing pH. Therefore, various processes and carbon sinks in the biokarst system are sensitive to pH changes, and biokarst processes play an important negative feedback role in the release of CO2 by acidification. The results also suggest that the carbon sink associated with carbonate weathering cannot be neglected when considering the global carbon cycle on the scale of thousands of years (<3 ka).</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015SolE....6..609W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015SolE....6..609W"><span>Remediation of degraded arable steppe soils in Moldova using vetch as green manure</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Wiesmeier, M.; Lungu, M.; Hübner, R.; Cerbari, V.</p> <p>2015-05-01</p> <p>In the Republic of Moldova, non-sustainable arable farming led to severe degradation and erosion of fertile steppe soils (Chernozems). As a result, the Chernozems lost about 40% of their initial amounts of soil organic carbon (SOC). The aim of this study was to remediate degraded arable soils and promote carbon sequestration by implementation of cover cropping and green manuring in Moldova. Thereby, the suitability of the legume hairy vetch (Vicia sativa) as cover crop under the dry continental climate of Moldova was examined. At two experimental sites, the effect of cover cropping on chemical and physical soil properties as well as on yields of subsequent main crops was determined. The results showed a significant increase of SOC after incorporation of hairy vetch mainly due to increases of aggregate-occluded and mineral-associated OC. This was related to a high above- and belowground biomass production of hairy vetch associated with a high input of carbon and nitrogen into arable soils. A calculation of SOC stocks based on equivalent soil masses revealed a sequestration of around 3 t C ha-1yr-1 as a result of hairy vetch cover cropping. The buildup of SOC was associated with an improvement of the soil structure as indicated by a distinct decrease of bulk density and a relative increase of macroaggregates at the expense of microaggregates and clods. As a result, yields of subsequent main crops increased by around 20%. Our results indicated that hairy vetch is a promising cover crop to remediate degraded steppe soils, control soil erosion and sequester substantial amounts of atmospheric C in arable soils of Moldova.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li class="active"><span>23</span></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_23 --> <div id="page_24" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li class="active"><span>24</span></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="461"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFM.B33E2125R','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFM.B33E2125R"><span>Modeling the Distribution and Type of High-Latitude Natural Wetlands for Methane Studies</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Romanski, J.; Matthews, E.</p> <p>2017-12-01</p> <p>High latitude (>50N) natural wetlands emit a substantial amount of methane to the atmosphere, and are located in a region of amplified warming. Northern hemisphere high latitudes are characterized by cold climates, extensive permafrost, poor drainage, short growing seasons, and slow decay rates. Under these conditions, organic carbon accumulates in the soil, sequestering CO2 from the atmosphere. Methanogens produce methane from this carbon reservoir, converting stored carbon into a powerful greenhouse gas. Methane emission from wetland ecosystems depends on vegetation type, climate characteristics (e.g, precipitation amount and seasonality, temperature, snow cover, etc.), and geophysical variables (e.g., permafrost, soil type, and landscape slope). To understand how wetland methane dynamics in this critical region will respond to climate change, we have to first understand how wetlands themselves will change and therefore, what the primary controllers of wetland distribution and type are. Understanding these relationships permits data-anchored, physically-based modeling of wetland distribution and type in other climate scenarios, such as paleoclimates or future climates, a necessary first step toward modeling wetland methane emissions in these scenarios. We investigate techniques and datasets for predicting the distribution and type of high latitude (>50N) natural wetlands from a suite of geophysical and climate predictors. Hierarchical clustering is used to derive an empirical methane-centric wetland model. The model is applied in a multistep process - first to predict the distribution of wetlands from relevant geophysical parameters, and then, given the predicted wetland distribution, to classify the wetlands into methane-relevant types using an expanded suite of climate and biogeophysical variables. As the optimum set of predictor variables is not known a priori, the model is applied iteratively, and each simulation is evaluated with respect to observed high-latitude wetlands.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFMGC13B0776V','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFMGC13B0776V"><span>Effects of the international soybean trade on the dynamics of Gross Primary Productivity in soybean-producing regions in China and Brazil</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Viña, A.; Silva, R. F. B. D.; Yang, H.; Liu, J.</p> <p>2017-12-01</p> <p>The international trade of agricultural commodities, such as soybean, is driven by a series of pull and push factors linked to market demand. These in turn fluctuate based on changes in economic affluence, infrastructure development, and socioeconomic homogenization, among others, in both sending and receiving systems. While many studies have analyzed some of these push/pull factors and their environmental effects in either sending or receiving systems, few studies have assessed these effects simultaneously in both sending and receiving systems. This study evaluates the effects of the soybean trade between Brazil and China on the spatio-temporal patterns of gross primary productivity (GPP) in both sending and receiving systems. The GPP is a measure of the amount of biomass produced through photosynthesis across space and through time. This metric is directly related with the amount of carbon that is sequestered from the atmosphere, and thus is related with the impacts of land use/cover dynamics on global climate change. The spatio-temporal patterns of both GPP and land use/cover were evaluated simultaneously in two soybean-producing regions (state of Mato Grosso in Brazil, and Heilongjiang province in China) through the use of surface reflectance data acquired by the Moderate Resolution Imaging Spectroradiometer (MODIS) onboard NASA's Terra satellite, combined with a production efficiency model (PEM) entirely based on remotely sensed data. Results from this analysis provide new insights on the consequences of the international trade at local/regional scales, and allow assessing how changes in market demand for agricultural commodities may generate drastic environmental effects in both sending and receiving systems, with global implications on carbon sequestration and thus on climate change.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25881153','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25881153"><span>From waste water treatment to land management: Conversion of aquatic biomass to biochar for soil amelioration and the fortification of crops with essential trace elements.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Roberts, David A; Paul, Nicholas A; Cole, Andrew J; de Nys, Rocky</p> <p>2015-07-01</p> <p>Macroalgae can be grown in industrial waste water to sequester metals and the resulting biomass used for biotechnological applications. We have previously cultivated the freshwater macroalga Oedogonium at a coal-fired power station to treat a metal-contaminated effluent from that facility. We then produced biochar from this biomass and determined the suitability of both the biomass and the biochar for soil amelioration. The dried biomass of Oedogonium cultivated in the waste water contained several elements for which there are terrestrial biosolids criteria (As, Cd, Cr, Cu, Pb, Ni, Se and Zn) and leached significant amounts of these elements into solution. Here, we demonstrate that these biomass leachates impair the germination and growth of radishes as a model crop. However, the biochar produced from this same biomass leaches negligible amounts of metal into solution and the leachates support high germination and growth of radishes. Biochar produced at 750 °C leaches the least metal and has the highest recalcitrant C content. When this biochar is added to a low-quality soil it improves the retention of nutrients (N, P, Ca, Mg, K and Mo) from fertilizer in the soil and the growth of radishes by 35-40%. Radishes grown in the soils amended with the biochar have equal or lower metal contents than radishes grown in soil without biochar, but much higher concentrations of essential trace elements (Mo) and macro nutrients (P, K, Ca and Mg). The cultivation of macroalgae is an effective waste water bioremediation technology that also produces biomass that can be used as a feedstock for conversion to biochar for soil amelioration. Copyright © 2015 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=307232&Lab=NHEERL&keyword=physical+AND+activity&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=307232&Lab=NHEERL&keyword=physical+AND+activity&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Physical disintegration of biochar: An overlooked process</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Biochar is a form of black carbon (BC) that has been documented to be resistant to both microbial and chemical degradation pathways as well as simultaneously sequestering atmospheric carbon (C) and postulated to act as a soil fertility agent by providing critical inorganic plant ...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/FR-2010-01-27/pdf/2010-1350.pdf','FEDREG'); return false;" href="https://www.gpo.gov/fdsys/pkg/FR-2010-01-27/pdf/2010-1350.pdf"><span>75 FR 4259 - Revisions to the EDA Regulations</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.gpo.gov/fdsys/browse/collection.action?collectionCode=FR">Federal Register 2010, 2011, 2012, 2013, 2014</a></p> <p></p> <p>2010-01-27</p> <p>... Aggressive EDA Leadership and Oversight Needed To Correct Persistent Problems in the RLF Program (March 2007... talent to ensure a Project's successful execution. (c) Advances productivity, innovation and... withdraw any sequestered funds. (ii) Persistent non-compliance. An RLF Recipient will generally be allowed...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=150248&Lab=NRMRL&keyword=RNA+RNA&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=150248&Lab=NRMRL&keyword=RNA+RNA&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>CHARACTERIZATION OF VIRAL RNA EXTRACTION EFFICIENCY FROM ENVIRONMENTAL WATERS</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Inhibition of PCR by environmental factors is a common problem affecting the sensitive detection of pathogenic microorganisms in environmental waters. This inhibition is caused by one of three mechanisms: 1) failure to lyse the microorganism, 2) degradation or sequestering of the...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/16825471','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/16825471"><span>Carbon supply and storage in tilled and nontilled soils as influenced by cover crops and nitrogen fertilization.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Sainju, Upendra M; Singh, Bharat P; Whitehead, Wayne F; Wang, Shirley</p> <p>2006-01-01</p> <p>Soil carbon (C) sequestration in tilled and nontilled areas can be influenced by crop management practices due to differences in plant C inputs and their rate of mineralization. We examined the influence of four cover crops {legume [hairy vetch (Vicia villosa Roth)], nonlegume [rye (Secale cereale L.)], biculture of legume and nonlegume (vetch and rye), and no cover crops (or winter weeds)} and three nitrogen (N) fertilization rates (0, 60 to 65, and 120 to 130 kg N ha(-1)) on C inputs from cover crops, cotton (Gossypium hirsutum L.), and sorghum [Sorghum bicolor (L.) Moench)], and soil organic carbon (SOC) at the 0- to 120-cm depth in tilled and nontilled areas. A field experiment was conducted on Dothan sandy loam (fine-loamy, siliceous, thermic Plinthic Paleudults) from 1999 to 2002 in central Georgia. Total C inputs to the soil from cover crops, cotton, and sorghum from 2000 to 2002 ranged from 6.8 to 22.8 Mg ha(-1). The SOC at 0 to 10 cm fluctuated with C input from October 1999 to November 2002 and was greater from cover crops than from weeds in no-tilled plots. In contrast, SOC values at 10 to 30 cm in no-tilled and at 0 to 60 cm in chisel-tilled plots were greater for biculture than for weeds. As a result, C at 0 to 30 cm was sequestered at rates of 267, 33, -133, and -967 kg C ha(-1) yr(-1) for biculture, rye, vetch, and weeds, respectively, in the no-tilled plot. In strip-tilled and chisel-tilled plots, SOC at 0 to 30 cm decreased at rates of 233 to 1233 kg C ha(-1) yr(-1). The SOC at 0 to 30 cm increased more in cover crops with 120 to 130 kg N ha(-1) yr(-1) than in weeds with 0 kg N ha(-1) yr(-1), regardless of tillage. In the subtropical humid region of the southeastern United States, cover crops and N fertilization can increase the amount of C input and storage in tilled and nontilled soils, and hairy vetch and rye biculture was more effective in sequestering C than monocultures or no cover crop.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFMPP43E..04P','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFMPP43E..04P"><span>The co-evolution of seawater δ18O and δD</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Pope, E. C.</p> <p>2017-12-01</p> <p>The δ18O of marine carbonate and silica precipitates has increased by 15‰ over the last ca. 3.5 billion years. Whether this shift reflects a parallel increase in oxygen isotope compositions of seawater with time, Precambrian atmospheric temperatures >55°C, or complete alteration of ancient samples during diagenesis, remains controversial despite nearly a half-century of debate. Early mass balance models of the modern ocean system suggested near constant δ18OSEAWATER over time due to the buffering capacity of fresh oceanic crust. However, fluxes controlling 18O sources and sinks to the ocean (high-temperature alteration of the seafloor, and low-temperature weathering of continental and ocean crust, respectively) have not remained fixed throughout Earth history. I adapted published mass balance models for δ18OSEAWATER to evaluate how continental growth, the subaerial emergence of continents, and decreasing mantle temperature affect the magnitude of 18O sources and sinks, and thus the evolution of seawater δ18O since the early Archean. These factors also affect the δD of seawater, which is controlled by the flux of water between mantle, crustal and glacial reservoirs, such that its evolution can be used as an independent constraint on the magnitude that these variables have had on δ18O evolution. The models indicate that a key parameter controlling δ18OSEAWATER is the flux of water between the mantle and free water of the exosphere. Recent geophysical models suggest that the capacity for subducting slabs to sequester water into the deep ocean has increased as the mantle has cooled. Hydrous minerals in subducted oceanic crust have a net δ18O lower than seawater. Incomplete recycling of water from these phases in subduction zones results in progressive removal of 16O from the ocean and thus can explain a significant portion of the increase in δ18O recorded in the marine sediment record. However, mass balance constraints on the global hydrogen budget limits the amount of water which could be sequestered in the mantle. An increase in δDSEAWATER by approximately 25 ± 5‰ since ca. 3.8 Ga, as reflected in the composition of oceanic serpentinites and hydrous silicate minerals formed in subduction-related metasomatic environments, is mostly compensated for by continental growth and the mass of modern glaciers.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/825555','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/825555"><span>CHEMICAL FIXATION OF CO2 IN COAL COMBUSTION PRODUCTS AND RECYCLING THROUGH BIOSYSTEMS</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>C. Henry Copeland; Paul Pier; Samantha Whitehead</p> <p>2003-12-15</p> <p>This Annual Technical Progress Report presents the principle results in enhanced growth of algae using coal combustion products as a catalyst to increase bicarbonate levels in solution. A co-current reactor is present that increases the gas phase to bicarbonate transfer rate by a factor of five to nine. The bicarbonate concentration at a given pH is approximately double that obtained using a control column of similar construction. Algae growth experiments were performed under laboratory conditions to obtain baseline production rates and to perfect experimental methods. The final product of this initial phase in algae production is presented. Algal growth canmore » be limited by several factors, including the level of bicarbonate available for photosynthesis, the pH of the growth solution, nutrient levels, and the size of the cell population, which determines the available space for additional growth. In order to supply additional CO2 to increase photosynthesis and algal biomass production, fly ash reactor has been demonstrated to increase the available CO2 in solution above the limits that are achievable with dissolved gas alone. The amount of dissolved CO2 can be used to control pH for optimum growth. Periodic harvesting of algae can be used to maintain algae in the exponential, rapid growth phase. An 800 liter scale up demonstrated that larger scale production is possible. The larger experiment demonstrated that indirect addition of CO2 is feasible and produces significantly less stress on the algal system. With better harvesting methods, nutrient management, and carbon dioxide management, an annual biomass harvest of about 9,000 metric tons per square kilometer (36 MT per acre) appears to be feasible. To sequester carbon, the algal biomass needs to be placed in a permanent location. If drying is undesirable, the biomass will eventually begin to aerobically decompose. It was demonstrated that algal biomass is a suitable feed to an anaerobic digester to produce methane. The remaining carbonaceous material is essentially bio-inactive and is permanently sequestered. The feasibility of using algae to convert carbon dioxide to a biomass has been demonstrated. This biomass provides a sustainable means to produce methane, ethanol, and/or bio diesel. The first application of concept demonstrated by the project could be to use algal biomass production to capture carbon dioxide associated with ethanol production.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3816948','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3816948"><span>Bile acid malabsorption in chronic diarrhea: Pathophysiology and treatment</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Barkun, Alan; Love, Jonathan; Gould, Michael; Pluta, Henryk; Steinhart, A Hillary</p> <p>2013-01-01</p> <p>BACKGROUND: Bile acid malabsorption (BAM) is a common but frequently under-recognized cause of chronic diarrhea, with an estimated prevalence of 4% to 5%. METHODS: The published literature for the period 1965 to 2012 was examined for articles regarding the pathophysiology and treatment of BAM to provide an overview of the management of BAM in gastroenterology practice. RESULTS: BAM is classified as type 1 (secondary to ileal dysfunction), type 2 (idiopathic) or type 3 (secondary to gastrointestinal disorders not associated with ileal dysfunction). The estimated prevalence of BAM is >90% in patients with resected Crohn disease (CD) and 11% to 52% of unresected CD patients (type 1); 33% in diarrhea-predominant irritable bowel syndrome (type 2); and is a frequent finding postcholecystectomy or postvagotomy (type 3). Investigations include BAM fecal bile acid assay, 23-seleno-25-homo-tauro-cholic acid (SeHCAT) testing and high-performance liquid chromatography of serum 7-α-OH-4-cholesten-3-one (C4), to determine the level of bile acid synthesis. A less time-consuming and expensive alternative in practice is an empirical trial of the bile acid sequestering agent cholestyramine. An estimated 70% to 96% of chronic diarrhea patients with BAM respond to short-course cholestyramine. Adverse effects include constipation, nausea, borborygmi, flatulence, bloating and abdominal pain. Other bile acid sequestering agents, such as colestipol and colesevelam, are currently being investigated for the treatment of BAM-associated diarrhea. CONCLUSIONS: BAM is a common cause of chronic diarrhea presenting in gastroenterology practice. In accordance with current guidelines, an empirical trial of a bile acid sequestering agent is warranted as part of the clinical workup to rule out BAM. PMID:24199211</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70026623','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70026623"><span>Hazard assessment of a simulated oil spill on intertidal areas of the St. Lawrence River with SPMD-TOX</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Johnson, B. Thomas; Petty, J.D.; Huckins, J.N.; Lee, Kenneth; Gauthier, J.</p> <p>2004-01-01</p> <p>Phytoremediation in a simulated crude oil spill was studied with a “minimalistic” approach. The SPMD-TOX paradigm—a miniature passive sorptive device to collect and concentrate chemicals and microscale tests to detect toxicity—was used to monitor over time the bioavailability and potential toxicity of an oil spill. A simulated crude oil spill was initiated on an intertidal freshwater grass-wetland along the St. Lawrence River southwest of Quebec City, Quebec, Canada. Several phytoremediation treatments were investigated; to dissipate and ameliorate the spill, treatments included nutrient amendments with inorganic nitrogen sources (ammonium nitrate and sodium nitrate) and phosphate (super triple phosphate) with and without cut plants, with natural attenuation (no phytoremedial treatment) as a control. Sequestered oil residues were bioavailable in all oil-treated plots in Weeks 1 and 2. Interestingly, the samples were colored and fluoresced under ultraviolet light. In addition, microscale tests showed that sequestered residues were acutely toxic and genotoxic, as well as that they induced hepatic P450enzymes. Analysis of these data suggested that polycyclic aromatic hydrocarbons were among the bioavailable residues sequestered. In addition, these findings suggested that the toxic bioavailable fractions of the oil spill and degradation products dissipated rapidly over time because after the second week the water column contained no oil or detectable degradation products in this riverine intertidal wetland. SPMD-TOX revealed no evidence of bioavailable oil products in Weeks 4, 6, 8, and 12. All phytoremediation efforts appeared to be ineffective in changing either the dissipation rate or the ability to ameliorate the oil toxicity. SPMD-TOX analysis of the water columns from these riverine experimental plots profiled the occurrence, dissipation, and influence of phytoremediation on the bioavailability and toxicity of oil products (parent or degradation products).</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/19174894','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/19174894"><span>Distribution and weathering of crude oil residues on shorelines 18 years after the Exxon Valdez spill.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Boehm, Paul D; Page, David S; Brown, John S; Neff, Jerry M; Bragg, James R; Atlas, Ronald M</p> <p>2008-12-15</p> <p>In 2007, a systematic study was conducted to evaluate the form and location of residues of oil buried on Prince William Sound (PWS) shorelines, 18 years after the 1989 Exxon Valdez Oil Spill (EVOS). We took 678 sediment samples from 22 sites that were most heavily oiled in 1989 and known to contain the heaviest subsurface oil (SSO) deposits based on multiple studies conducted since 2001. An additional 66 samples were taken from two sites, both heavily oiled in 1989 and known to be active otter foraging sites. All samples were analyzed for total extractable hydrocarbons (TEH), and 25% were also analyzed for saturated and aromatic hydrocarbon weathering parameters. Over 90% of the samples from all sites contained light or no SSO at all. Of samples containing SSO, 81% showed total polycyclic aromatic hydrocarbon (TPAH) losses greater than 70%, relative to cargo oil, with most having >80% loss. Samples with SSO were observed in isolated patches sequestered by surface boulder and cobble armoring. Samples showing lowest TPAH loss correlated strongly with higher elevations in the intertidal zones. Of the 17 atypical, less-weathered samples having less than 70% loss of TPAH (>30% remaining), only two were found sequestered in the lower intertidal zone, both at a single site. Most of the EVOS oil in PWS has been eliminated due to natural weathering. Some isolated SSO residues remain because they are sequestered and only slowly affected by natural weathering processes that normally would bring about their rapid removal. Even where SSO patches remain, most are highly weathered, sporadically distributed at a small number of sites, and widely separated from biologically productive lower intertidal zones where most foraging by wildlife occurs.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/17893426','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/17893426"><span>In vitro studies to show sequestration of matrix metalloproteinases by silver-containing wound care products.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Walker, Michael; Bowler, Philip G; Cochrane, Christine A</p> <p>2007-09-01</p> <p>Excess or "uncontrolled" proteinase activity in the wound bed has been implicated as one factor that may delay or compromise wound healing. One proteinase group--matrix metalloproteinases--includes collagenases, elastase, and gelatinases and can be endogenous (cell) or exogenous (bacterial) in origin. A study was conducted to assess the ability of five silver-containing wound care products to reduce a known matrix metalloproteinase supernatant concentration in vitro. Four silver-containing wound dressings (a carboxy-methyl cellulose, a nanocrystalline, a hydro-alginate, and a collagen/oxidized regenerated cellulose composite dressing), along with a 0.5% aqueous silver nitrate [w/v] solution and controls for matrix metalloproteinase-2 and matrix metalloproteinase-9 sourced from ex vivo dermal tissue and blood monocytes, respectively, were used. Extracts were separated and purified using gelatine-Sepharose column chromatography and dialysis and polyacrylamide gel electrophoretic zymography was used to analyze specific matrix metalloproteinase activity. All dressings and the solution were shown to sequester both matrix metalloproteinases. The silver-containing carboxy-methyl cellulose dressing showed significantly greater sequestration for matrix metalloproteinase-2 at 6 and 24 hours (P< 0.001) compared to the other treatments. For matrix metalloproteinase-9, both the carboxy-methyl cellulose dressing and the oxidized regenerated cellulose dressing achieved significant sequestration when compared to the other treatments at 24 hours (P <0.001), which was maintained to 48 hours (P < 0.001). Results from this study show that silver-containing dressings are effective in sequestering matrix metalloproteinase-2 and -9 and that this can be achieved without a sacrificial protein (eg, collagen). Although the varying ability of wound dressings to sequester matrix metalloproteinases has been shown in vitro, further in vivo evidence is required to confirm these findings.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28929747','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28929747"><span>Structure of an Insecticide Sequestering Carboxylesterase from the Disease Vector Culex quinquefasciatus: What Makes an Enzyme a Good Insecticide Sponge?</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Hopkins, Davis H; Fraser, Nicholas J; Mabbitt, Peter D; Carr, Paul D; Oakeshott, John G; Jackson, Colin J</p> <p>2017-10-17</p> <p>Carboxylesterase (CBE)-mediated metabolic resistance to organophosphate and carbamate insecticides is a major problem for the control of insect disease vectors, such as the mosquito. The most common mechanism involves overexpression of CBEs that bind to the insecticide with high affinity, thereby sequestering them before they can interact with their target. However, the absence of any structure for an insecticide-sequestering CBE limits our understanding of the molecular basis for this process. We present the first structure of a CBE involved in sequestration, Cqestβ2 1 , from the mosquito disease vector Culex quinquefasciatus. Lysine methylation was used to obtain the crystal structure of Cqestβ2 1 , which adopts a canonical α/β-hydrolase fold that has high similarity to the target of organophosphate and carbamate insecticides, acetylcholinesterase. Sequence similarity networks of the insect carboxyl/cholinesterase family demonstrate that CBEs associated with metabolic insecticide resistance across many species share a level of similarity that distinguishes them from a variety of other classes. This is further emphasized by the structural similarities and differences in the binding pocket and active site residues of Cqestβ2 1 and other insect carboxyl/cholinesterases. Stopped-flow and steady-state inhibition studies support a major role for Cqestβ2 1 in organophosphate resistance and a minor role in carbamate resistance. Comparison with another isoform associated with insecticide resistance, Cqestβ1, showed both enzymes have similar affinity to insecticides, despite 16 amino acid differences between the two proteins. This provides a molecular understanding of pesticide sequestration by insect CBEs and could facilitate the design of CBE-specific inhibitors to circumvent this resistance mechanism in the future.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AtmEn.171..149R','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AtmEn.171..149R"><span>Carbon sequestration by mangrove forest: One approach for managing carbon dioxide emission from coal-based power plant</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Ray, Raghab; Jana, Tapan Kumar</p> <p>2017-12-01</p> <p>Mangroves are known as natural carbon sinks, taking CO2 out of the atmosphere and store it in their biomass for many years. This study aimed to investigate the capacity of world's largest mangrove, the Sundarbans (Indian part) to sequester anthropogenic CO2 emitted from the proximate coal-based thermal power plant in Kolaghat (∼100 km away from mangrove site). Study also includes Kolkata, one of the largest metropolises of India (∼150 km away from mangrove site) for comparing micrometeorological parameters, biosphere-atmosphere CO2 exchange fluxes and atmospheric pollutants between three distinct environments: mangrove-power plant-metropolis. Hourly sampling of atmospheric CO2 in all three sites (late December 2011 and early January 2012) revealed that CO2 concentrations and emission fluxes were maximum around the power plant (360-621 ppmv, 5.6-56.7 mg m-2s-1 respectively) followed by the metropolis (383-459 ppmv, 3.8-20.4 mg m-2s-1 respectively) and mangroves (277-408 ppmv, -8.9-11.4 mg m-2s-1, respectively). Monthly coal consumption rates (41-57, in 104 ton month-1) were converted to CO2 suggesting that 2.83 Tg C was added to the atmosphere in 2011 for the generation of 7469732 MW energy from the power plant. Indian Sundarbans (4264 km2) sequestered total of 2.79 Tg C which was 0.64% of the annual fossil fuel emission from India in the same time period. Based on these data from 2010 to 2011, it is calculated that about 4328 km2 mangrove forest coverage is needed to sequester all CO2 emitted from the Kolaghat power plant.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.ars.usda.gov/research/publications/publication/?seqNo115=288348','TEKTRAN'); return false;" href="http://www.ars.usda.gov/research/publications/publication/?seqNo115=288348"><span>Use of tropical maize for bioethanol production</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ars.usda.gov/research/publications/find-a-publication/">USDA-ARS?s Scientific Manuscript database</a></p> <p></p> <p></p> <p>Tropical maize is an alternative energy crop being considered as a feedstock for bioethanol production in the North Central and Midwest United States. Tropical maize is advantageous because it produces large amounts of soluble sugars in its stalks, creates a large amount of biomass, and requires lo...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.ars.usda.gov/research/publications/publication/?seqNo115=314972','TEKTRAN'); return false;" href="http://www.ars.usda.gov/research/publications/publication/?seqNo115=314972"><span>Field windbreaks for bioenergy production and carbon sequestration</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ars.usda.gov/research/publications/find-a-publication/">USDA-ARS?s Scientific Manuscript database</a></p> <p></p> <p></p> <p>Tree windbreaks are a multi-benefit land use with the ability to mitigate climate change by modifying the local microclimate for improved crop growth and sequestering carbon in soil and biomass. Agroforestry practices are also being considered for bioenergy production by direct combustion or produci...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://ntrs.nasa.gov/search.jsp?R=20010053171&hterms=death&qs=Ntx%3Dmode%2Bmatchall%26Ntk%3DAll%26N%3D0%26No%3D30%26Ntt%3Ddeath','NASA-TRS'); return false;" href="https://ntrs.nasa.gov/search.jsp?R=20010053171&hterms=death&qs=Ntx%3Dmode%2Bmatchall%26Ntk%3DAll%26N%3D0%26No%3D30%26Ntt%3Ddeath"><span>Morphological and Geomicrobiological Characteristics of an Endolithic Microbial Community from the Badwater Basin, Death Valley, California</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://ntrs.nasa.gov/search.jsp">NASA Technical Reports Server (NTRS)</a></p> <p>Douglas, S.</p> <p>2001-01-01</p> <p>ESEM-EDS studies of an endolithic evaporite community from Death Valley revealed its ability to sequester water and affect the partitioning of trace metals in this environment. Additional information is contained in the original extended abstract.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=252385&Lab=NRMRL&keyword=quantitative+AND+time+AND+series+AND+research&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=252385&Lab=NRMRL&keyword=quantitative+AND+time+AND+series+AND+research&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Modeling Dissolved Organic Carbon (DOC) Dynamics in Flooded Wetlands</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Wetlands play an important role in the global carbon cycle and are recognized for their considerable potential to sequester carbon. Wetlands contain the largest component (18-30%) of the terrestrial carbon pool and are responsible for about a quarter of the global methane emissi...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.fs.usda.gov/treesearch/pubs/46351','TREESEARCH'); return false;" href="https://www.fs.usda.gov/treesearch/pubs/46351"><span>Outplanting [Chapter 17</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.fs.usda.gov/treesearch/">Treesearch</a></p> <p>Diane L. Haase; Thomas D. Landis; R. Kasten Dumroese</p> <p>2014-01-01</p> <p>Survival and growth after outplanting are the ultimate tests of nursery plant quality. After the nursery plants are established in the field, they will provide many benefits to the environment by improving soil quality, enhancing biodiversity, inhibiting establishment of invasive plants, sequestering carbon, restoring native plant populations, providing windbreaks,...</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li class="active"><span>24</span></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_24 --> <div id="page_25" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li class="active"><span>25</span></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="481"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.congress.gov/bill/113th-congress/senate-bill/788?q=%7B%22search%22%3A%5B%22Control+AND+design%22%5D%7D&r=45','SCIGOV-CON-113'); return false;" href="https://www.congress.gov/bill/113th-congress/senate-bill/788?q=%7B%22search%22%3A%5B%22Control+AND+design%22%5D%7D&r=45"><span>A bill to suspend the fiscal year 2013 sequester and establish limits on war-related spending.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://thomas.loc.gov/home/LegislativeData.php?&n=BSS&c=113">THOMAS, 113th Congress </a></p> <p>Sen. Reid, Harry [D-NV</p> <p>2013-04-23</p> <p>Senate - 04/24/2013 Read the second time. Placed on Senate Legislative Calendar under General Orders. Calendar No. 64. (All Actions) Tracker: This bill has the status IntroducedHere are the steps for Status of Legislation:</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=132010&keyword=geology&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=132010&keyword=geology&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>IRON SULFIDES IN THE ENVIRONMENT: FORMATION, FATE, AND SIGNIFICANCE TO CONTAMINANT BEHAVIOR</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>This seminar will cover aspects of the geochemistry of iron sulfides, their formation in sedimentary and aquifer environments, and their roles in sequestering and releasing contaminants. A special emphasis will be placed on the interactions between iron sulfides and arsenic.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.ars.usda.gov/research/publications/publication/?seqNo115=346121','TEKTRAN'); return false;" href="http://www.ars.usda.gov/research/publications/publication/?seqNo115=346121"><span>Does grazing management matter for soil carbon sequestration in shortgrass steppe?</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ars.usda.gov/research/publications/find-a-publication/">USDA-ARS?s Scientific Manuscript database</a></p> <p></p> <p></p> <p>Considerable uncertainty remains regarding the potential of grazing management on semiarid rangelands to sequester soil carbon. Short-term (less than 1 decade) studies have determined that grazing management potentially influences fluxes of carbon, but such studies are strongly influenced by prevail...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://www.ars.usda.gov/research/publications/publication/?seqNo115=304812','TEKTRAN'); return false;" href="http://www.ars.usda.gov/research/publications/publication/?seqNo115=304812"><span>Sound management may sequester methane in grazed rangeland ecosystems</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ars.usda.gov/research/publications/find-a-publication/">USDA-ARS?s Scientific Manuscript database</a></p> <p></p> <p></p> <p>Considering their contribution to global warming, the sources and sinks of methane (CH4) should be accounted when undertaking a greenhouse gas inventory for grazed rangeland ecosystems. The aim of this study was to evaluate the mitigation potential of current ecological management programs implement...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=105024&keyword=climate+AND+change+AND+rise+AND+temperature&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=105024&keyword=climate+AND+change+AND+rise+AND+temperature&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>RISING ATMOSPHERIC CO2 AND CARBON SEQUESTRATION IN FORESTS</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Rising CO2 concentrations in the Earth's atmosphere could alter Earth's climate system, but it is thought that higher concentrations may improve plant growth by way of the fertilization effect. Forests, an important part of the Earth's carbon cycle, are postulated to sequester a...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=260260&Lab=NCER&keyword=marketing&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=260260&Lab=NCER&keyword=marketing&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>DEVELOPMENT OF AN IMPROVED ARBORLOO TO PROMOTE SANITATION IN RURAL ENVIRONMENTS</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p><p> Multiple designs will be generated. They will be evaluated against appropriate criteria as identified by the design teams in consultation with advisors and likely users. Such criteria will, at a minimum include the ability to sequester waste material, structural robustness,...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=325410&Lab=NHEERL&keyword=Johnson&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=325410&Lab=NHEERL&keyword=Johnson&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Carrot, Corn, Lettuce and Soybean Nutrient Contents are Affected by Biochar</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Biochar, the carbon-rich material remaining after pyrolysis of cellulosic and manure feedstocks, has the potential as a soil amendment to sequester carbon and to improve soil water-holding and nutrient properties- thereby enhancing plant growth. However, biochar produced from so...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25815920','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25815920"><span>Sequestration of vacuum energy and the end of the universe.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Kaloper, Nemanja; Padilla, Antonio</p> <p>2015-03-13</p> <p>Recently, we proposed a mechanism for sequestering the standard model vacuum energy that predicts that the Universe will collapse. Here we present a simple mechanism for bringing about this collapse, employing a scalar field whose potential is linear and becomes negative, providing the negative energy density required to end the expansion. The slope of the potential is chosen to allow for the expansion to last until the current Hubble time, about 10^{10} years, to accommodate our Universe. Crucially, this choice is technically natural due to a shift symmetry. Moreover, vacuum energy sequestering selects radiatively stable initial conditions for the collapse, which guarantee that immediately before the turnaround the Universe is dominated by the linear potential which drives an epoch of accelerated expansion for at least an e fold. Thus, a single, technically natural choice for the slope ensures that the collapse is imminent and is preceded by the current stage of cosmic acceleration, giving a new answer to the "why now?"</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/servlets/purl/541839','SCIGOV-STC'); return false;" href="https://www.osti.gov/servlets/purl/541839"><span></span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>NONE</p> <p></p> <p>The Voluntary Reporting Program, developed pursuant to Section 1605(b) of the Energy Policy Act of 1992, permits corporations, government agencies, households, and voluntary organizations to report on their emissions of greenhouse gases, and on actions taken that have reduced or avoided emissions or sequestered carbon, to the Energy Information Administration (EIA). This, the second annual report of the Voluntary Reporting Program, describes information provided by the participating organizations on their aggregate emissions and emissions reductions, as well as their emissions reduction or avoidance projects, through 1995. This information has been compiled into a database that includes reports from 142 organizationsmore » and descriptions of 967 projects that either reduced greenhouse gas emissions or sequestered carbon. Fifty-one reporters also provided estimates of emissions, and emissions reductions achieved, for their entire organizations. The projects described actions taken to reduce emissions of carbon dioxide from energy production and use; to reduce methane and nitrous oxide emissions from energy use, waste management, and agricultural processes; to reduce emissions of halocarbons, such as CFCs and their replacements; and to increase carbon sequestration.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29413942','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29413942"><span>Production, process optimization and molecular characterization of polyhydroxyalkanoate (PHA) by CO2 sequestering B. cereus SS105.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Maheshwari, Neha; Kumar, Madan; Thakur, Indu Shekhar; Srivastava, Shaili</p> <p>2018-04-01</p> <p>Carbon dioxide sequestering bacterial strains were previously isolated from free air CO 2 enriched (FACE) soil. In the present study, these strains were screened for PHA accumulation and Bacillus cereus SS105 was found to be the most prominent PHA accumulating strain on sodium bicarbonate and molasses as carbon source. This strain was further characterized by Spectrofluorometric method and Confocal microscopy after staining with Nile red. PHA granules in inclusion bodies were visualized by Transmission Electron Microscopy. The PHA and its monomer composition were characterized by GC-MS followed by FTIR and NMR. The genetic basis of PHA production was confirmed by the amplification, cloning and analysis of PHA biosynthesis genes phaR, phaB and phaC from B. cereus with the degenerate primers. The PHA production was further optimized by Response Surface Methodology and the percent increase observed after optimization was 55.16% (w/v). Copyright © 2018 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2856910','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2856910"><span>αE-catenin regulates actin dynamics independently of cadherin-mediated cell–cell adhesion</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Benjamin, Jacqueline M.; Kwiatkowski, Adam V.; Yang, Changsong; Korobova, Farida; Pokutta, Sabine; Svitkina, Tatyana</p> <p>2010-01-01</p> <p>αE-catenin binds the cell–cell adhesion complex of E-cadherin and β-catenin (β-cat) and regulates filamentous actin (F-actin) dynamics. In vitro, binding of αE-catenin to the E-cadherin–β-cat complex lowers αE-catenin affinity for F-actin, and αE-catenin alone can bind F-actin and inhibit Arp2/3 complex–mediated actin polymerization. In cells, to test whether αE-catenin regulates actin dynamics independently of the cadherin complex, the cytosolic αE-catenin pool was sequestered to mitochondria without affecting overall levels of αE-catenin or the cadherin–catenin complex. Sequestering cytosolic αE-catenin to mitochondria alters lamellipodia architecture and increases membrane dynamics and cell migration without affecting cell–cell adhesion. In contrast, sequestration of cytosolic αE-catenin to the plasma membrane reduces membrane dynamics. These results demonstrate that the cytosolic pool of αE-catenin regulates actin dynamics independently of cell–cell adhesion. PMID:20404114</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22230082','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22230082"><span>Coal fly ash basins as an attractive nuisance to birds: parental provisioning exposes nestlings to harmful trace elements.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bryan, A L; Hopkins, W A; Parikh, J H; Jackson, B P; Unrine, J M</p> <p>2012-02-01</p> <p>Birds attracted to nest around coal ash settling basins may expose their young to contaminants by provisioning them with contaminated food. Diet and tissues of Common Grackle (Quiscalus quiscala) nestlings were analyzed for trace elements to determine if nestlings were accumulating elements via dietary exposure and if feather growth limits elemental accumulation in other tissues. Arsenic, cadmium, and selenium concentrations in ash basin diets were 5× higher than reference diets. Arsenic, cadmium, and selenium concentrations were elevated in feather, liver, and carcass, but only liver Se concentrations approached levels of concern. Approximately 15% of the total body burden of Se, As, and Cd was sequestered in feathers of older (>5 days) nestlings, whereas only 1% of the total body burden of Sr was sequestered in feathers. Feather concentrations of only three elements (As, Se, and Sr) were correlated with liver concentrations, indicating their value as non-lethal indicators of exposure. Copyright © 2011 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3663275','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3663275"><span>Autophagy Contributes to Leaf Starch Degradation[C][W</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Wang, Yan; Yu, Bingjie; Zhao, Jinping; Guo, Jiangbo; Li, Ying; Han, Shaojie; Huang, Lei; Du, Yumei; Hong, Yiguo; Tang, Dingzhong; Liu, Yule</p> <p>2013-01-01</p> <p>Transitory starch, a major photosynthetic product in the leaves of land plants, accumulates in chloroplasts during the day and is hydrolyzed to maltose and Glc at night to support respiration and metabolism. Previous studies in Arabidopsis thaliana indicated that the degradation of transitory starch only occurs in the chloroplasts. Here, we report that autophagy, a nonplastidial process, participates in leaf starch degradation. Excessive starch accumulation was observed in Nicotiana benthamiana seedlings treated with an autophagy inhibitor and in autophagy-related (ATG) gene-silenced N. benthamiana and in Arabidopsis atg mutants. Autophagic activity in the leaves responded to the dynamic starch contents during the night. Microscopy showed that a type of small starch granule-like structure (SSGL) was localized outside the chloroplast and was sequestered by autophagic bodies. Moreover, an increased number of SSGLs was observed during starch depletion, and disruption of autophagy reduced the number of vacuole-localized SSGLs. These data suggest that autophagy contributes to transitory starch degradation by sequestering SSGLs to the vacuole for their subsequent breakdown. PMID:23564204</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25103900','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25103900"><span>The effect of ocean acidification on carbon storage and sequestration in seagrass beds; a global and UK context.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Garrard, Samantha L; Beaumont, Nicola J</p> <p>2014-09-15</p> <p>Ocean acidification will have many negative consequences for marine organisms and ecosystems, leading to a decline in many ecosystem services provided by the marine environment. This study reviews the effect of ocean acidification (OA) on seagrasses, assessing how this may affect their capacity to sequester carbon in the future and providing an economic valuation of these changes. If ocean acidification leads to a significant increase in above- and below-ground biomass, the capacity of seagrass to sequester carbon will be significantly increased. The associated value of this increase in sequestration capacity is approximately £500 and 600 billion globally between 2010 and 2100. A proportionally similar increase in carbon sequestration value was found for the UK. This study highlights one of the few positive stories for ocean acidification and underlines that sustainable management of seagrasses is critical to avoid their continued degradation and loss of carbon sequestration capacity. Copyright © 2014 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017APS..MAR.R6003L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017APS..MAR.R6003L"><span>Preventing Small Molecule Nucleation and Crystallization by Sequestering in a Micelle Corona</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Li, Ziang; Johnson, Lindsay; Ricarte, Ralm; Yao, Letitia; Hillmyer, Marc; Bates, Frank; Lodge, Timothy</p> <p></p> <p>We exploited a blend of hydroxypropyl methylcellulose acetate succinate and poly(N-isopropylacrylamide) (PNIPAm) to improve the solubility and dissolution of a rapidly crystallizing model drug molecule phenytoin and observed synergistic effect in vitro at constant drug loading by varying the blending ratio. Dynamic and static light scattering experiments showed that PNIPAm self-assembled into micelles in aqueous solution. We believe that adding these PNIPAm micelles inhibited both nucleation and crystal growth of phenytoin based on the polarized light micrographs taken from the dissolution media. The drug-polymer intermolecular interaction was revealed by nuclear Overhauser effect spectroscopy and further quantified by diffusion ordered spectroscopy. We found that the phenytoin molecules were sequestered in aqueous solution by partitioning into the corona of the micelle. The blend strategy through the use of self-assembled micelles showcased in this study offers a new platform for designing advanced excipients for oral drug delivery. This study was funded by The Dow Chemical Company through Agreement 224249AT with the University of Minnesota.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4110788','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4110788"><span>A Method to Identify and Isolate Pluripotent Human Stem Cells and Mouse Epiblast Stem Cells Using Lipid Body-Associated Retinyl Ester Fluorescence</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Muthusamy, Thangaselvam; Mukherjee, Odity; Menon, Radhika; Megha, P.B.; Panicker, Mitradas M.</p> <p>2014-01-01</p> <p>Summary We describe the use of a characteristic blue fluorescence to identify and isolate pluripotent human embryonic stem cells and human-induced pluripotent stem cells. The blue fluorescence emission (450–500 nm) is readily observed by fluorescence microscopy and correlates with the expression of pluripotency markers (OCT4, SOX2, and NANOG). It allows easy identification and isolation of undifferentiated human pluripotent stem cells, high-throughput fluorescence sorting and subsequent propagation. The fluorescence appears early during somatic reprogramming. We show that the blue fluorescence arises from the sequestration of retinyl esters in cytoplasmic lipid bodies. The retinoid-sequestering lipid bodies are specific to human and mouse pluripotent stem cells of the primed or epiblast-like state and absent in naive mouse embryonic stem cells. Retinol, present in widely used stem cell culture media, is sequestered as retinyl ester specifically by primed pluripotent cells and also can induce the formation of these lipid bodies. PMID:25068130</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5103067','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5103067"><span>Structural basis of GM-CSF and IL-2 sequestration by the viral decoy receptor GIF</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Felix, Jan; Kandiah, Eaazhisai; De Munck, Steven; Bloch, Yehudi; van Zundert, Gydo C.P.; Pauwels, Kris; Dansercoer, Ann; Novanska, Katka; Read, Randy J.; Bonvin, Alexandre M.J.J.; Vergauwen, Bjorn; Verstraete, Kenneth; Gutsche, Irina; Savvides, Savvas N.</p> <p>2016-01-01</p> <p>Subversion of the host immune system by viruses is often mediated by molecular decoys that sequester host proteins pivotal to mounting effective immune responses. The widespread mammalian pathogen parapox Orf virus deploys GIF, a member of the poxvirus immune evasion superfamily, to antagonize GM-CSF (granulocyte macrophage colony-stimulating factor) and IL-2 (interleukin-2), two pleiotropic cytokines of the mammalian immune system. However, structural and mechanistic insights into the unprecedented functional duality of GIF have remained elusive. Here we reveal that GIF employs a dimeric binding platform that sequesters two copies of its target cytokines with high affinity and slow dissociation kinetics to yield distinct complexes featuring mutually exclusive interaction footprints. We illustrate how GIF serves as a competitive decoy receptor by leveraging binding hotspots underlying the cognate receptor interactions of GM-CSF and IL-2, without sharing any structural similarity with the cytokine receptors. Our findings contribute to the tracing of novel molecular mimicry mechanisms employed by pathogenic viruses. PMID:27819269</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23109840','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23109840"><span>Dual targeting and retrograde translocation: regulators of plant nuclear gene expression can be sequestered by plastids.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Krause, Kirsten; Oetke, Svenja; Krupinska, Karin</p> <p>2012-01-01</p> <p>Changes in the developmental or metabolic state of plastids can trigger profound changes in the transcript profiles of nuclear genes. Many nuclear transcription factors were shown to be controlled by signals generated in the organelles. In addition to the many different compounds for which an involvement in retrograde signaling is discussed, accumulating evidence suggests a role for proteins in plastid-to-nucleus communication. These proteins might be sequestered in the plastids before they act as transcriptional regulators in the nucleus. Indeed, several proteins exhibiting a dual localization in the plastids and the nucleus are promising candidates for such a direct signal transduction involving regulatory protein storage in the plastids. Among such proteins, the nuclear transcription factor WHIRLY1 stands out as being the only protein for which an export from plastids and translocation to the nucleus has been experimentally demonstrated. Other proteins, however, strongly support the notion that this pathway might be more common than currently believed.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26474765','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26474765"><span>Protected areas' role in climate-change mitigation.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Melillo, Jerry M; Lu, Xiaoliang; Kicklighter, David W; Reilly, John M; Cai, Yongxia; Sokolov, Andrei P</p> <p>2016-03-01</p> <p>Globally, 15.5 million km(2) of land are currently identified as protected areas, which provide society with many ecosystem services including climate-change mitigation. Combining a global database of protected areas, a reconstruction of global land-use history, and a global biogeochemistry model, we estimate that protected areas currently sequester 0.5 Pg C annually, which is about one fifth of the carbon sequestered by all land ecosystems annually. Using an integrated earth systems model to generate climate and land-use scenarios for the twenty-first century, we project that rapid climate change, similar to high-end projections in IPCC's Fifth Assessment Report, would cause the annual carbon sequestration rate in protected areas to drop to about 0.3 Pg C by 2100. For the scenario with both rapid climate change and extensive land-use change driven by population and economic pressures, 5.6 million km(2) of protected areas would be converted to other uses, and carbon sequestration in the remaining protected areas would drop to near zero by 2100.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4304414','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4304414"><span>Autophagy enhances NFκB activity in specific tissue macrophages by sequestering A20 to boost antifungal immunity</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Kanayama, Masashi; Inoue, Makoto; Danzaki, Keiko; Hammer, Gianna; He, You-Wen; Shinohara, Mari L.</p> <p>2014-01-01</p> <p>Immune responses must be well restrained in a steady state to avoid excessive inflammation. However, such restraints are quickly removed to exert anti-microbial responses. Here, we report a role of autophagy in an early host anti-fungal response by enhancing NFκB activity through A20 sequestration. Enhancement of NFκB activation is achieved by autophagic depletion of A20, an NFκB inhibitor, in F4/80hi macrophages in the spleen, peritoneum, and kidney. We show that p62, an autophagic adaptor protein, captures A20 to sequester it in the autophagosome. This allows the macrophages to release chemokines to recruit neutrophils. Indeed, mice lacking autophagy in myeloid cells show higher susceptibility to Candida albicans infection due to impairment in neutrophil recruitment. Thus, at least in the specific aforementioned tissues, autophagy appears to break A20-dependent suppression in F4/80hi macrophages, which express abundant A20 and contribute to the initiation of efficient innate immune responses. PMID:25609235</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li class="active"><span>25</span></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_25 --> <div class="footer-extlink text-muted" style="margin-bottom:1rem; text-align:center;">Some links on this page may take you to non-federal websites. 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