Sample records for simple summary statistics
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Lin, Kao; Li, Haipeng; Schlötterer, Christian; Futschik, Andreas
2011-01-01
Summary statistics are widely used in population genetics, but they suffer from the drawback that no simple sufficient summary statistic exists, which captures all information required to distinguish different evolutionary hypotheses. Here, we apply boosting, a recent statistical method that combines simple classification rules to maximize their joint predictive performance. We show that our implementation of boosting has a high power to detect selective sweeps. Demographic events, such as bottlenecks, do not result in a large excess of false positives. A comparison to other neutrality tests shows that our boosting implementation performs well compared to other neutrality tests. Furthermore, we evaluated the relative contribution of different summary statistics to the identification of selection and found that for recent sweeps integrated haplotype homozygosity is very informative whereas older sweeps are better detected by Tajima's π. Overall, Watterson's θ was found to contribute the most information for distinguishing between bottlenecks and selection. PMID:21041556
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Pope, Larry M.; Diaz, A.M.
1982-01-01
Quality-of-water data, collected October 21-23, 1980, and a statistical summary are presented for 42 coal-mined strip pits in Crawford and Cherokee Counties, Southeastern Kansas. The statistical summary includes minimum and maximum observed values , mean, and standard deviation. Simple linear regression equations relating specific conductance, dissolved solids, and acidity to concentrations of dissolved solids, sulfate, calcium, and magnesium, potassium, aluminum, and iron are also presented. (USGS)
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Simple Data Sets for Distinct Basic Summary Statistics
ERIC Educational Resources Information Center
Lesser, Lawrence M.
2011-01-01
It is important to avoid ambiguity with numbers because unfortunate choices of numbers can inadvertently make it possible for students to form misconceptions or make it difficult for teachers to tell if students obtained the right answer for the right reason. Therefore, it is important to make sure when introducing basic summary statistics that…
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Using R in Introductory Statistics Courses with the pmg Graphical User Interface
ERIC Educational Resources Information Center
Verzani, John
2008-01-01
The pmg add-on package for the open source statistics software R is described. This package provides a simple to use graphical user interface (GUI) that allows introductory statistics students, without advanced computing skills, to quickly create the graphical and numeric summaries expected of them. (Contains 9 figures.)
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2013-01-01
Background Plasma glucose levels are important measures in medical care and research, and are often obtained from oral glucose tolerance tests (OGTT) with repeated measurements over 2–3 hours. It is common practice to use simple summary measures of OGTT curves. However, different OGTT curves can yield similar summary measures, and information of physiological or clinical interest may be lost. Our mean aim was to extract information inherent in the shape of OGTT glucose curves, compare it with the information from simple summary measures, and explore the clinical usefulness of such information. Methods OGTTs with five glucose measurements over two hours were recorded for 974 healthy pregnant women in their first trimester. For each woman, the five measurements were transformed into smooth OGTT glucose curves by functional data analysis (FDA), a collection of statistical methods developed specifically to analyse curve data. The essential modes of temporal variation between OGTT glucose curves were extracted by functional principal component analysis. The resultant functional principal component (FPC) scores were compared with commonly used simple summary measures: fasting and two-hour (2-h) values, area under the curve (AUC) and simple shape index (2-h minus 90-min values, or 90-min minus 60-min values). Clinical usefulness of FDA was explored by regression analyses of glucose tolerance later in pregnancy. Results Over 99% of the variation between individually fitted curves was expressed in the first three FPCs, interpreted physiologically as “general level” (FPC1), “time to peak” (FPC2) and “oscillations” (FPC3). FPC1 scores correlated strongly with AUC (r=0.999), but less with the other simple summary measures (−0.42≤r≤0.79). FPC2 scores gave shape information not captured by simple summary measures (−0.12≤r≤0.40). FPC2 scores, but not FPC1 nor the simple summary measures, discriminated between women who did and did not develop gestational diabetes later in pregnancy. Conclusions FDA of OGTT glucose curves in early pregnancy extracted shape information that was not identified by commonly used simple summary measures. This information discriminated between women with and without gestational diabetes later in pregnancy. PMID:23327294
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Frøslie, Kathrine Frey; Røislien, Jo; Qvigstad, Elisabeth; Godang, Kristin; Bollerslev, Jens; Voldner, Nanna; Henriksen, Tore; Veierød, Marit B
2013-01-17
Plasma glucose levels are important measures in medical care and research, and are often obtained from oral glucose tolerance tests (OGTT) with repeated measurements over 2-3 hours. It is common practice to use simple summary measures of OGTT curves. However, different OGTT curves can yield similar summary measures, and information of physiological or clinical interest may be lost. Our mean aim was to extract information inherent in the shape of OGTT glucose curves, compare it with the information from simple summary measures, and explore the clinical usefulness of such information. OGTTs with five glucose measurements over two hours were recorded for 974 healthy pregnant women in their first trimester. For each woman, the five measurements were transformed into smooth OGTT glucose curves by functional data analysis (FDA), a collection of statistical methods developed specifically to analyse curve data. The essential modes of temporal variation between OGTT glucose curves were extracted by functional principal component analysis. The resultant functional principal component (FPC) scores were compared with commonly used simple summary measures: fasting and two-hour (2-h) values, area under the curve (AUC) and simple shape index (2-h minus 90-min values, or 90-min minus 60-min values). Clinical usefulness of FDA was explored by regression analyses of glucose tolerance later in pregnancy. Over 99% of the variation between individually fitted curves was expressed in the first three FPCs, interpreted physiologically as "general level" (FPC1), "time to peak" (FPC2) and "oscillations" (FPC3). FPC1 scores correlated strongly with AUC (r=0.999), but less with the other simple summary measures (-0.42≤r≤0.79). FPC2 scores gave shape information not captured by simple summary measures (-0.12≤r≤0.40). FPC2 scores, but not FPC1 nor the simple summary measures, discriminated between women who did and did not develop gestational diabetes later in pregnancy. FDA of OGTT glucose curves in early pregnancy extracted shape information that was not identified by commonly used simple summary measures. This information discriminated between women with and without gestational diabetes later in pregnancy.
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Metrics for comparing neuronal tree shapes based on persistent homology.
Li, Yanjie; Wang, Dingkang; Ascoli, Giorgio A; Mitra, Partha; Wang, Yusu
2017-01-01
As more and more neuroanatomical data are made available through efforts such as NeuroMorpho.Org and FlyCircuit.org, the need to develop computational tools to facilitate automatic knowledge discovery from such large datasets becomes more urgent. One fundamental question is how best to compare neuron structures, for instance to organize and classify large collection of neurons. We aim to develop a flexible yet powerful framework to support comparison and classification of large collection of neuron structures efficiently. Specifically we propose to use a topological persistence-based feature vectorization framework. Existing methods to vectorize a neuron (i.e, convert a neuron to a feature vector so as to support efficient comparison and/or searching) typically rely on statistics or summaries of morphometric information, such as the average or maximum local torque angle or partition asymmetry. These simple summaries have limited power in encoding global tree structures. Based on the concept of topological persistence recently developed in the field of computational topology, we vectorize each neuron structure into a simple yet informative summary. In particular, each type of information of interest can be represented as a descriptor function defined on the neuron tree, which is then mapped to a simple persistence-signature. Our framework can encode both local and global tree structure, as well as other information of interest (electrophysiological or dynamical measures), by considering multiple descriptor functions on the neuron. The resulting persistence-based signature is potentially more informative than simple statistical summaries (such as average/mean/max) of morphometric quantities-Indeed, we show that using a certain descriptor function will give a persistence-based signature containing strictly more information than the classical Sholl analysis. At the same time, our framework retains the efficiency associated with treating neurons as points in a simple Euclidean feature space, which would be important for constructing efficient searching or indexing structures over them. We present preliminary experimental results to demonstrate the effectiveness of our persistence-based neuronal feature vectorization framework.
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Metrics for comparing neuronal tree shapes based on persistent homology
Li, Yanjie; Wang, Dingkang; Ascoli, Giorgio A.; Mitra, Partha
2017-01-01
As more and more neuroanatomical data are made available through efforts such as NeuroMorpho.Org and FlyCircuit.org, the need to develop computational tools to facilitate automatic knowledge discovery from such large datasets becomes more urgent. One fundamental question is how best to compare neuron structures, for instance to organize and classify large collection of neurons. We aim to develop a flexible yet powerful framework to support comparison and classification of large collection of neuron structures efficiently. Specifically we propose to use a topological persistence-based feature vectorization framework. Existing methods to vectorize a neuron (i.e, convert a neuron to a feature vector so as to support efficient comparison and/or searching) typically rely on statistics or summaries of morphometric information, such as the average or maximum local torque angle or partition asymmetry. These simple summaries have limited power in encoding global tree structures. Based on the concept of topological persistence recently developed in the field of computational topology, we vectorize each neuron structure into a simple yet informative summary. In particular, each type of information of interest can be represented as a descriptor function defined on the neuron tree, which is then mapped to a simple persistence-signature. Our framework can encode both local and global tree structure, as well as other information of interest (electrophysiological or dynamical measures), by considering multiple descriptor functions on the neuron. The resulting persistence-based signature is potentially more informative than simple statistical summaries (such as average/mean/max) of morphometric quantities—Indeed, we show that using a certain descriptor function will give a persistence-based signature containing strictly more information than the classical Sholl analysis. At the same time, our framework retains the efficiency associated with treating neurons as points in a simple Euclidean feature space, which would be important for constructing efficient searching or indexing structures over them. We present preliminary experimental results to demonstrate the effectiveness of our persistence-based neuronal feature vectorization framework. PMID:28809960
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Polygenic scores via penalized regression on summary statistics.
Mak, Timothy Shin Heng; Porsch, Robert Milan; Choi, Shing Wan; Zhou, Xueya; Sham, Pak Chung
2017-09-01
Polygenic scores (PGS) summarize the genetic contribution of a person's genotype to a disease or phenotype. They can be used to group participants into different risk categories for diseases, and are also used as covariates in epidemiological analyses. A number of possible ways of calculating PGS have been proposed, and recently there is much interest in methods that incorporate information available in published summary statistics. As there is no inherent information on linkage disequilibrium (LD) in summary statistics, a pertinent question is how we can use LD information available elsewhere to supplement such analyses. To answer this question, we propose a method for constructing PGS using summary statistics and a reference panel in a penalized regression framework, which we call lassosum. We also propose a general method for choosing the value of the tuning parameter in the absence of validation data. In our simulations, we showed that pseudovalidation often resulted in prediction accuracy that is comparable to using a dataset with validation phenotype and was clearly superior to the conservative option of setting the tuning parameter of lassosum to its lowest value. We also showed that lassosum achieved better prediction accuracy than simple clumping and P-value thresholding in almost all scenarios. It was also substantially faster and more accurate than the recently proposed LDpred. © 2017 WILEY PERIODICALS, INC.
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Cloud Compute for Global Climate Station Summaries
NASA Astrophysics Data System (ADS)
Baldwin, R.; May, B.; Cogbill, P.
2017-12-01
Global Climate Station Summaries are simple indicators of observational normals which include climatic data summarizations and frequency distributions. These typically are statistical analyses of station data over 5-, 10-, 20-, 30-year or longer time periods. The summaries are computed from the global surface hourly dataset. This dataset totaling over 500 gigabytes is comprised of 40 different types of weather observations with 20,000 stations worldwide. NCEI and the U.S. Navy developed these value added products in the form of hourly summaries from many of these observations. Enabling this compute functionality in the cloud is the focus of the project. An overview of approach and challenges associated with application transition to the cloud will be presented.
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Weighted Statistical Binning: Enabling Statistically Consistent Genome-Scale Phylogenetic Analyses
Bayzid, Md Shamsuzzoha; Mirarab, Siavash; Boussau, Bastien; Warnow, Tandy
2015-01-01
Because biological processes can result in different loci having different evolutionary histories, species tree estimation requires multiple loci from across multiple genomes. While many processes can result in discord between gene trees and species trees, incomplete lineage sorting (ILS), modeled by the multi-species coalescent, is considered to be a dominant cause for gene tree heterogeneity. Coalescent-based methods have been developed to estimate species trees, many of which operate by combining estimated gene trees, and so are called "summary methods". Because summary methods are generally fast (and much faster than more complicated coalescent-based methods that co-estimate gene trees and species trees), they have become very popular techniques for estimating species trees from multiple loci. However, recent studies have established that summary methods can have reduced accuracy in the presence of gene tree estimation error, and also that many biological datasets have substantial gene tree estimation error, so that summary methods may not be highly accurate in biologically realistic conditions. Mirarab et al. (Science 2014) presented the "statistical binning" technique to improve gene tree estimation in multi-locus analyses, and showed that it improved the accuracy of MP-EST, one of the most popular coalescent-based summary methods. Statistical binning, which uses a simple heuristic to evaluate "combinability" and then uses the larger sets of genes to re-calculate gene trees, has good empirical performance, but using statistical binning within a phylogenomic pipeline does not have the desirable property of being statistically consistent. We show that weighting the re-calculated gene trees by the bin sizes makes statistical binning statistically consistent under the multispecies coalescent, and maintains the good empirical performance. Thus, "weighted statistical binning" enables highly accurate genome-scale species tree estimation, and is also statistically consistent under the multi-species coalescent model. New data used in this study are available at DOI: http://dx.doi.org/10.6084/m9.figshare.1411146, and the software is available at https://github.com/smirarab/binning. PMID:26086579
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A Deterministic Annealing Approach to Clustering AIRS Data
NASA Technical Reports Server (NTRS)
Guillaume, Alexandre; Braverman, Amy; Ruzmaikin, Alexander
2012-01-01
We will examine the validity of means and standard deviations as a basis for climate data products. We will explore the conditions under which these two simple statistics are inadequate summaries of the underlying empirical probability distributions by contrasting them with a nonparametric, method called Deterministic Annealing technique
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Whole-Range Assessment: A Simple Method for Analysing Allelopathic Dose-Response Data
An, Min; Pratley, J. E.; Haig, T.; Liu, D.L.
2005-01-01
Based on the typical biological responses of an organism to allelochemicals (hormesis), concepts of whole-range assessment and inhibition index were developed for improved analysis of allelopathic data. Examples of their application are presented using data drawn from the literature. The method is concise and comprehensive, and makes data grouping and multiple comparisons simple, logical, and possible. It improves data interpretation, enhances research outcomes, and is a statistically efficient summary of the plant response profiles. PMID:19330165
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A Simple Method to Control Positive Baseline Trend within Data Nonoverlap
ERIC Educational Resources Information Center
Parker, Richard I.; Vannest, Kimberly J.; Davis, John L.
2014-01-01
Nonoverlap is widely used as a statistical summary of data; however, these analyses rarely correct unwanted positive baseline trend. This article presents and validates the graph rotation for overlap and trend (GROT) technique, a hand calculation method for controlling positive baseline trend within an analysis of data nonoverlap. GROT is…
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Mutual interference between statistical summary perception and statistical learning.
Zhao, Jiaying; Ngo, Nhi; McKendrick, Ryan; Turk-Browne, Nicholas B
2011-09-01
The visual system is an efficient statistician, extracting statistical summaries over sets of objects (statistical summary perception) and statistical regularities among individual objects (statistical learning). Although these two kinds of statistical processing have been studied extensively in isolation, their relationship is not yet understood. We first examined how statistical summary perception influences statistical learning by manipulating the task that participants performed over sets of objects containing statistical regularities (Experiment 1). Participants who performed a summary task showed no statistical learning of the regularities, whereas those who performed control tasks showed robust learning. We then examined how statistical learning influences statistical summary perception by manipulating whether the sets being summarized contained regularities (Experiment 2) and whether such regularities had already been learned (Experiment 3). The accuracy of summary judgments improved when regularities were removed and when learning had occurred in advance. In sum, calculating summary statistics impeded statistical learning, and extracting statistical regularities impeded statistical summary perception. This mutual interference suggests that statistical summary perception and statistical learning are fundamentally related.
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Probabilistic Evaluation of Competing Climate Models
NASA Astrophysics Data System (ADS)
Braverman, A. J.; Chatterjee, S.; Heyman, M.; Cressie, N.
2017-12-01
A standard paradigm for assessing the quality of climate model simulations is to compare what these models produce for past and present time periods, to observations of the past and present. Many of these comparisons are based on simple summary statistics called metrics. Here, we propose an alternative: evaluation of competing climate models through probabilities derived from tests of the hypothesis that climate-model-simulated and observed time sequences share common climate-scale signals. The probabilities are based on the behavior of summary statistics of climate model output and observational data, over ensembles of pseudo-realizations. These are obtained by partitioning the original time sequences into signal and noise components, and using a parametric bootstrap to create pseudo-realizations of the noise sequences. The statistics we choose come from working in the space of decorrelated and dimension-reduced wavelet coefficients. We compare monthly sequences of CMIP5 model output of average global near-surface temperature anomalies to similar sequences obtained from the well-known HadCRUT4 data set, as an illustration.
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Salvatore, Stefania; Bramness, Jørgen Gustav; Reid, Malcolm J; Thomas, Kevin Victor; Harman, Christopher; Røislien, Jo
2015-01-01
Wastewater-based epidemiology (WBE) is a new methodology for estimating the drug load in a population. Simple summary statistics and specification tests have typically been used to analyze WBE data, comparing differences between weekday and weekend loads. Such standard statistical methods may, however, overlook important nuanced information in the data. In this study, we apply functional data analysis (FDA) to WBE data and compare the results to those obtained from more traditional summary measures. We analysed temporal WBE data from 42 European cities, using sewage samples collected daily for one week in March 2013. For each city, the main temporal features of two selected drugs were extracted using functional principal component (FPC) analysis, along with simpler measures such as the area under the curve (AUC). The individual cities' scores on each of the temporal FPCs were then used as outcome variables in multiple linear regression analysis with various city and country characteristics as predictors. The results were compared to those of functional analysis of variance (FANOVA). The three first FPCs explained more than 99% of the temporal variation. The first component (FPC1) represented the level of the drug load, while the second and third temporal components represented the level and the timing of a weekend peak. AUC was highly correlated with FPC1, but other temporal characteristic were not captured by the simple summary measures. FANOVA was less flexible than the FPCA-based regression, and even showed concordance results. Geographical location was the main predictor for the general level of the drug load. FDA of WBE data extracts more detailed information about drug load patterns during the week which are not identified by more traditional statistical methods. Results also suggest that regression based on FPC results is a valuable addition to FANOVA for estimating associations between temporal patterns and covariate information.
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Willis, Brian H; Riley, Richard D
2017-09-20
An important question for clinicians appraising a meta-analysis is: are the findings likely to be valid in their own practice-does the reported effect accurately represent the effect that would occur in their own clinical population? To this end we advance the concept of statistical validity-where the parameter being estimated equals the corresponding parameter for a new independent study. Using a simple ('leave-one-out') cross-validation technique, we demonstrate how we may test meta-analysis estimates for statistical validity using a new validation statistic, Vn, and derive its distribution. We compare this with the usual approach of investigating heterogeneity in meta-analyses and demonstrate the link between statistical validity and homogeneity. Using a simulation study, the properties of Vn and the Q statistic are compared for univariate random effects meta-analysis and a tailored meta-regression model, where information from the setting (included as model covariates) is used to calibrate the summary estimate to the setting of application. Their properties are found to be similar when there are 50 studies or more, but for fewer studies Vn has greater power but a higher type 1 error rate than Q. The power and type 1 error rate of Vn are also shown to depend on the within-study variance, between-study variance, study sample size, and the number of studies in the meta-analysis. Finally, we apply Vn to two published meta-analyses and conclude that it usefully augments standard methods when deciding upon the likely validity of summary meta-analysis estimates in clinical practice. © 2017 The Authors. Statistics in Medicine published by John Wiley & Sons Ltd. © 2017 The Authors. Statistics in Medicine published by John Wiley & Sons Ltd.
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GWAMA: software for genome-wide association meta-analysis.
Mägi, Reedik; Morris, Andrew P
2010-05-28
Despite the recent success of genome-wide association studies in identifying novel loci contributing effects to complex human traits, such as type 2 diabetes and obesity, much of the genetic component of variation in these phenotypes remains unexplained. One way to improving power to detect further novel loci is through meta-analysis of studies from the same population, increasing the sample size over any individual study. Although statistical software analysis packages incorporate routines for meta-analysis, they are ill equipped to meet the challenges of the scale and complexity of data generated in genome-wide association studies. We have developed flexible, open-source software for the meta-analysis of genome-wide association studies. The software incorporates a variety of error trapping facilities, and provides a range of meta-analysis summary statistics. The software is distributed with scripts that allow simple formatting of files containing the results of each association study and generate graphical summaries of genome-wide meta-analysis results. The GWAMA (Genome-Wide Association Meta-Analysis) software has been developed to perform meta-analysis of summary statistics generated from genome-wide association studies of dichotomous phenotypes or quantitative traits. Software with source files, documentation and example data files are freely available online at http://www.well.ox.ac.uk/GWAMA.
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Riley, Richard D.
2017-01-01
An important question for clinicians appraising a meta‐analysis is: are the findings likely to be valid in their own practice—does the reported effect accurately represent the effect that would occur in their own clinical population? To this end we advance the concept of statistical validity—where the parameter being estimated equals the corresponding parameter for a new independent study. Using a simple (‘leave‐one‐out’) cross‐validation technique, we demonstrate how we may test meta‐analysis estimates for statistical validity using a new validation statistic, Vn, and derive its distribution. We compare this with the usual approach of investigating heterogeneity in meta‐analyses and demonstrate the link between statistical validity and homogeneity. Using a simulation study, the properties of Vn and the Q statistic are compared for univariate random effects meta‐analysis and a tailored meta‐regression model, where information from the setting (included as model covariates) is used to calibrate the summary estimate to the setting of application. Their properties are found to be similar when there are 50 studies or more, but for fewer studies Vn has greater power but a higher type 1 error rate than Q. The power and type 1 error rate of Vn are also shown to depend on the within‐study variance, between‐study variance, study sample size, and the number of studies in the meta‐analysis. Finally, we apply Vn to two published meta‐analyses and conclude that it usefully augments standard methods when deciding upon the likely validity of summary meta‐analysis estimates in clinical practice. © 2017 The Authors. Statistics in Medicine published by John Wiley & Sons Ltd. PMID:28620945
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Crawford, John R; Garthwaite, Paul H; Denham, Annie K; Chelune, Gordon J
2012-12-01
Regression equations have many useful roles in psychological assessment. Moreover, there is a large reservoir of published data that could be used to build regression equations; these equations could then be employed to test a wide variety of hypotheses concerning the functioning of individual cases. This resource is currently underused because (a) not all psychologists are aware that regression equations can be built not only from raw data but also using only basic summary data for a sample, and (b) the computations involved are tedious and prone to error. In an attempt to overcome these barriers, Crawford and Garthwaite (2007) provided methods to build and apply simple linear regression models using summary statistics as data. In the present study, we extend this work to set out the steps required to build multiple regression models from sample summary statistics and the further steps required to compute the associated statistics for drawing inferences concerning an individual case. We also develop, describe, and make available a computer program that implements these methods. Although there are caveats associated with the use of the methods, these need to be balanced against pragmatic considerations and against the alternative of either entirely ignoring a pertinent data set or using it informally to provide a clinical "guesstimate." Upgraded versions of earlier programs for regression in the single case are also provided; these add the point and interval estimates of effect size developed in the present article.
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Bellenguez, Céline; Strange, Amy; Freeman, Colin; Donnelly, Peter; Spencer, Chris C A
2012-01-01
High-throughput genotyping arrays provide an efficient way to survey single nucleotide polymorphisms (SNPs) across the genome in large numbers of individuals. Downstream analysis of the data, for example in genome-wide association studies (GWAS), often involves statistical models of genotype frequencies across individuals. The complexities of the sample collection process and the potential for errors in the experimental assay can lead to biases and artefacts in an individual's inferred genotypes. Rather than attempting to model these complications, it has become a standard practice to remove individuals whose genome-wide data differ from the sample at large. Here we describe a simple, but robust, statistical algorithm to identify samples with atypical summaries of genome-wide variation. Its use as a semi-automated quality control tool is demonstrated using several summary statistics, selected to identify different potential problems, and it is applied to two different genotyping platforms and sample collections. The algorithm is written in R and is freely available at www.well.ox.ac.uk/chris-spencer chris.spencer@well.ox.ac.uk Supplementary data are available at Bioinformatics online.
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NASA Astrophysics Data System (ADS)
Alsing, Justin; Wandelt, Benjamin; Feeney, Stephen
2018-07-01
Many statistical models in cosmology can be simulated forwards but have intractable likelihood functions. Likelihood-free inference methods allow us to perform Bayesian inference from these models using only forward simulations, free from any likelihood assumptions or approximations. Likelihood-free inference generically involves simulating mock data and comparing to the observed data; this comparison in data space suffers from the curse of dimensionality and requires compression of the data to a small number of summary statistics to be tractable. In this paper, we use massive asymptotically optimal data compression to reduce the dimensionality of the data space to just one number per parameter, providing a natural and optimal framework for summary statistic choice for likelihood-free inference. Secondly, we present the first cosmological application of Density Estimation Likelihood-Free Inference (DELFI), which learns a parametrized model for joint distribution of data and parameters, yielding both the parameter posterior and the model evidence. This approach is conceptually simple, requires less tuning than traditional Approximate Bayesian Computation approaches to likelihood-free inference and can give high-fidelity posteriors from orders of magnitude fewer forward simulations. As an additional bonus, it enables parameter inference and Bayesian model comparison simultaneously. We demonstrate DELFI with massive data compression on an analysis of the joint light-curve analysis supernova data, as a simple validation case study. We show that high-fidelity posterior inference is possible for full-scale cosmological data analyses with as few as ˜104 simulations, with substantial scope for further improvement, demonstrating the scalability of likelihood-free inference to large and complex cosmological data sets.
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Code of Federal Regulations, 2010 CFR
2010-10-01
... statistical summaries and other information it maintains? 40.111 Section 40.111 Transportation Office of the... Testing Laboratories § 40.111 When and how must a laboratory disclose statistical summaries and other information it maintains? (a) As a laboratory, you must transmit an aggregate statistical summary, by employer...
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Mattfeldt, Torsten
2011-04-01
Computer-intensive methods may be defined as data analytical procedures involving a huge number of highly repetitive computations. We mention resampling methods with replacement (bootstrap methods), resampling methods without replacement (randomization tests) and simulation methods. The resampling methods are based on simple and robust principles and are largely free from distributional assumptions. Bootstrap methods may be used to compute confidence intervals for a scalar model parameter and for summary statistics from replicated planar point patterns, and for significance tests. For some simple models of planar point processes, point patterns can be simulated by elementary Monte Carlo methods. The simulation of models with more complex interaction properties usually requires more advanced computing methods. In this context, we mention simulation of Gibbs processes with Markov chain Monte Carlo methods using the Metropolis-Hastings algorithm. An alternative to simulations on the basis of a parametric model consists of stochastic reconstruction methods. The basic ideas behind the methods are briefly reviewed and illustrated by simple worked examples in order to encourage novices in the field to use computer-intensive methods. © 2010 The Authors Journal of Microscopy © 2010 Royal Microscopical Society.
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Evidence for a Global Sampling Process in Extraction of Summary Statistics of Item Sizes in a Set.
Tokita, Midori; Ueda, Sachiyo; Ishiguchi, Akira
2016-01-01
Several studies have shown that our visual system may construct a "summary statistical representation" over groups of visual objects. Although there is a general understanding that human observers can accurately represent sets of a variety of features, many questions on how summary statistics, such as an average, are computed remain unanswered. This study investigated sampling properties of visual information used by human observers to extract two types of summary statistics of item sets, average and variance. We presented three models of ideal observers to extract the summary statistics: a global sampling model without sampling noise, global sampling model with sampling noise, and limited sampling model. We compared the performance of an ideal observer of each model with that of human observers using statistical efficiency analysis. Results suggest that summary statistics of items in a set may be computed without representing individual items, which makes it possible to discard the limited sampling account. Moreover, the extraction of summary statistics may not necessarily require the representation of individual objects with focused attention when the sets of items are larger than 4.
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The Problem of Auto-Correlation in Parasitology
Pollitt, Laura C.; Reece, Sarah E.; Mideo, Nicole; Nussey, Daniel H.; Colegrave, Nick
2012-01-01
Explaining the contribution of host and pathogen factors in driving infection dynamics is a major ambition in parasitology. There is increasing recognition that analyses based on single summary measures of an infection (e.g., peak parasitaemia) do not adequately capture infection dynamics and so, the appropriate use of statistical techniques to analyse dynamics is necessary to understand infections and, ultimately, control parasites. However, the complexities of within-host environments mean that tracking and analysing pathogen dynamics within infections and among hosts poses considerable statistical challenges. Simple statistical models make assumptions that will rarely be satisfied in data collected on host and parasite parameters. In particular, model residuals (unexplained variance in the data) should not be correlated in time or space. Here we demonstrate how failure to account for such correlations can result in incorrect biological inference from statistical analysis. We then show how mixed effects models can be used as a powerful tool to analyse such repeated measures data in the hope that this will encourage better statistical practices in parasitology. PMID:22511865
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Selecting Summary Statistics in Approximate Bayesian Computation for Calibrating Stochastic Models
Burr, Tom
2013-01-01
Approximate Bayesian computation (ABC) is an approach for using measurement data to calibrate stochastic computer models, which are common in biology applications. ABC is becoming the “go-to” option when the data and/or parameter dimension is large because it relies on user-chosen summary statistics rather than the full data and is therefore computationally feasible. One technical challenge with ABC is that the quality of the approximation to the posterior distribution of model parameters depends on the user-chosen summary statistics. In this paper, the user requirement to choose effective summary statistics in order to accurately estimate the posterior distribution of model parameters is investigated and illustrated by example, using a model and corresponding real data of mitochondrial DNA population dynamics. We show that for some choices of summary statistics, the posterior distribution of model parameters is closely approximated and for other choices of summary statistics, the posterior distribution is not closely approximated. A strategy to choose effective summary statistics is suggested in cases where the stochastic computer model can be run at many trial parameter settings, as in the example. PMID:24288668
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Selecting summary statistics in approximate Bayesian computation for calibrating stochastic models.
Burr, Tom; Skurikhin, Alexei
2013-01-01
Approximate Bayesian computation (ABC) is an approach for using measurement data to calibrate stochastic computer models, which are common in biology applications. ABC is becoming the "go-to" option when the data and/or parameter dimension is large because it relies on user-chosen summary statistics rather than the full data and is therefore computationally feasible. One technical challenge with ABC is that the quality of the approximation to the posterior distribution of model parameters depends on the user-chosen summary statistics. In this paper, the user requirement to choose effective summary statistics in order to accurately estimate the posterior distribution of model parameters is investigated and illustrated by example, using a model and corresponding real data of mitochondrial DNA population dynamics. We show that for some choices of summary statistics, the posterior distribution of model parameters is closely approximated and for other choices of summary statistics, the posterior distribution is not closely approximated. A strategy to choose effective summary statistics is suggested in cases where the stochastic computer model can be run at many trial parameter settings, as in the example.
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Steyerberg, Ewout W; Vedder, Moniek M; Leening, Maarten J G; Postmus, Douwe; D'Agostino, Ralph B; Van Calster, Ben; Pencina, Michael J
2015-07-01
New markers may improve prediction of diagnostic and prognostic outcomes. We aimed to review options for graphical display and summary measures to assess the predictive value of markers over standard, readily available predictors. We illustrated various approaches using previously published data on 3264 participants from the Framingham Heart Study, where 183 developed coronary heart disease (10-year risk 5.6%). We considered performance measures for the incremental value of adding HDL cholesterol to a prediction model. An initial assessment may consider statistical significance (HR = 0.65, 95% confidence interval 0.53 to 0.80; likelihood ratio p < 0.001), and distributions of predicted risks (densities or box plots) with various summary measures. A range of decision thresholds is considered in predictiveness and receiver operating characteristic curves, where the area under the curve (AUC) increased from 0.762 to 0.774 by adding HDL. We can furthermore focus on reclassification of participants with and without an event in a reclassification graph, with the continuous net reclassification improvement (NRI) as a summary measure. When we focus on one particular decision threshold, the changes in sensitivity and specificity are central. We propose a net reclassification risk graph, which allows us to focus on the number of reclassified persons and their event rates. Summary measures include the binary AUC, the two-category NRI, and decision analytic variants such as the net benefit (NB). Various graphs and summary measures can be used to assess the incremental predictive value of a marker. Important insights for impact on decision making are provided by a simple graph for the net reclassification risk. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
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easyGWAS: A Cloud-Based Platform for Comparing the Results of Genome-Wide Association Studies.
Grimm, Dominik G; Roqueiro, Damian; Salomé, Patrice A; Kleeberger, Stefan; Greshake, Bastian; Zhu, Wangsheng; Liu, Chang; Lippert, Christoph; Stegle, Oliver; Schölkopf, Bernhard; Weigel, Detlef; Borgwardt, Karsten M
2017-01-01
The ever-growing availability of high-quality genotypes for a multitude of species has enabled researchers to explore the underlying genetic architecture of complex phenotypes at an unprecedented level of detail using genome-wide association studies (GWAS). The systematic comparison of results obtained from GWAS of different traits opens up new possibilities, including the analysis of pleiotropic effects. Other advantages that result from the integration of multiple GWAS are the ability to replicate GWAS signals and to increase statistical power to detect such signals through meta-analyses. In order to facilitate the simple comparison of GWAS results, we present easyGWAS, a powerful, species-independent online resource for computing, storing, sharing, annotating, and comparing GWAS. The easyGWAS tool supports multiple species, the uploading of private genotype data and summary statistics of existing GWAS, as well as advanced methods for comparing GWAS results across different experiments and data sets in an interactive and user-friendly interface. easyGWAS is also a public data repository for GWAS data and summary statistics and already includes published data and results from several major GWAS. We demonstrate the potential of easyGWAS with a case study of the model organism Arabidopsis thaliana , using flowering and growth-related traits. © 2016 American Society of Plant Biologists. All rights reserved.
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Applying the compound Poisson process model to the reporting of injury-related mortality rates.
Kegler, Scott R
2007-02-16
Injury-related mortality rate estimates are often analyzed under the assumption that case counts follow a Poisson distribution. Certain types of injury incidents occasionally involve multiple fatalities, however, resulting in dependencies between cases that are not reflected in the simple Poisson model and which can affect even basic statistical analyses. This paper explores the compound Poisson process model as an alternative, emphasizing adjustments to some commonly used interval estimators for population-based rates and rate ratios. The adjusted estimators involve relatively simple closed-form computations, which in the absence of multiple-case incidents reduce to familiar estimators based on the simpler Poisson model. Summary data from the National Violent Death Reporting System are referenced in several examples demonstrating application of the proposed methodology.
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DOT National Transportation Integrated Search
2001-01-01
The Bureau of Transportation Statistics (BTS) Airport Activity Statistics of Certificated Air Carriers: Summary Tables presents summary data for all scheduled and nonscheduled service by large certificated U.S. air carriers including the volume of pa...
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19 CFR 141.61 - Completion of entry and entry summary documentation.
Code of Federal Regulations, 2010 CFR
2010-04-01
... on CBP Form 7501. (e) Statistical information—(1) Information required on entry summary or withdrawal... a separate statistical reporting number, the applicable information required by the General Statistical Notes, Harmonized Tariff Schedule of the United States (HTSUS), must be shown on the entry summary...
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Challenges in Species Tree Estimation Under the Multispecies Coalescent Model
Xu, Bo; Yang, Ziheng
2016-01-01
The multispecies coalescent (MSC) model has emerged as a powerful framework for inferring species phylogenies while accounting for ancestral polymorphism and gene tree-species tree conflict. A number of methods have been developed in the past few years to estimate the species tree under the MSC. The full likelihood methods (including maximum likelihood and Bayesian inference) average over the unknown gene trees and accommodate their uncertainties properly but involve intensive computation. The approximate or summary coalescent methods are computationally fast and are applicable to genomic datasets with thousands of loci, but do not make an efficient use of information in the multilocus data. Most of them take the two-step approach of reconstructing the gene trees for multiple loci by phylogenetic methods and then treating the estimated gene trees as observed data, without accounting for their uncertainties appropriately. In this article we review the statistical nature of the species tree estimation problem under the MSC, and explore the conceptual issues and challenges of species tree estimation by focusing mainly on simple cases of three or four closely related species. We use mathematical analysis and computer simulation to demonstrate that large differences in statistical performance may exist between the two classes of methods. We illustrate that several counterintuitive behaviors may occur with the summary methods but they are due to inefficient use of information in the data by summary methods and vanish when the data are analyzed using full-likelihood methods. These include (i) unidentifiability of parameters in the model, (ii) inconsistency in the so-called anomaly zone, (iii) singularity on the likelihood surface, and (iv) deterioration of performance upon addition of more data. We discuss the challenges and strategies of species tree inference for distantly related species when the molecular clock is violated, and highlight the need for improving the computational efficiency and model realism of the likelihood methods as well as the statistical efficiency of the summary methods. PMID:27927902
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NASA Astrophysics Data System (ADS)
Sadegh, M.; Vrugt, J. A.
2013-12-01
The ever increasing pace of computational power, along with continued advances in measurement technologies and improvements in process understanding has stimulated the development of increasingly complex hydrologic models that simulate soil moisture flow, groundwater recharge, surface runoff, root water uptake, and river discharge at increasingly finer spatial and temporal scales. Reconciling these system models with field and remote sensing data is a difficult task, particularly because average measures of model/data similarity inherently lack the power to provide a meaningful comparative evaluation of the consistency in model form and function. The very construction of the likelihood function - as a summary variable of the (usually averaged) properties of the error residuals - dilutes and mixes the available information into an index having little remaining correspondence to specific behaviors of the system (Gupta et al., 2008). The quest for a more powerful method for model evaluation has inspired Vrugt and Sadegh [2013] to introduce "likelihood-free" inference as vehicle for diagnostic model evaluation. This class of methods is also referred to as Approximate Bayesian Computation (ABC) and relaxes the need for an explicit likelihood function in favor of one or multiple different summary statistics rooted in hydrologic theory that together have a much stronger and compelling diagnostic power than some aggregated measure of the size of the error residuals. Here, we will introduce an efficient ABC sampling method that is orders of magnitude faster in exploring the posterior parameter distribution than commonly used rejection and Population Monte Carlo (PMC) samplers. Our methodology uses Markov Chain Monte Carlo simulation with DREAM, and takes advantage of a simple computational trick to resolve discontinuity problems with the application of set-theoretic summary statistics. We will also demonstrate a set of summary statistics that are rather insensitive to errors in the forcing data. This enhances prospects of detecting model structural deficiencies.
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Linked Micromaps: Statistical Summaries in a Spatial Context
Communicating summaries of spatial data to decision makers and the public is challenging. We present a graphical method that provides both a geographic context and a statistical summary for such spatial data. Monitoring programs have a need for such geographical summaries. For ...
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Evaluation and application of summary statistic imputation to discover new height-associated loci.
Rüeger, Sina; McDaid, Aaron; Kutalik, Zoltán
2018-05-01
As most of the heritability of complex traits is attributed to common and low frequency genetic variants, imputing them by combining genotyping chips and large sequenced reference panels is the most cost-effective approach to discover the genetic basis of these traits. Association summary statistics from genome-wide meta-analyses are available for hundreds of traits. Updating these to ever-increasing reference panels is very cumbersome as it requires reimputation of the genetic data, rerunning the association scan, and meta-analysing the results. A much more efficient method is to directly impute the summary statistics, termed as summary statistics imputation, which we improved to accommodate variable sample size across SNVs. Its performance relative to genotype imputation and practical utility has not yet been fully investigated. To this end, we compared the two approaches on real (genotyped and imputed) data from 120K samples from the UK Biobank and show that, genotype imputation boasts a 3- to 5-fold lower root-mean-square error, and better distinguishes true associations from null ones: We observed the largest differences in power for variants with low minor allele frequency and low imputation quality. For fixed false positive rates of 0.001, 0.01, 0.05, using summary statistics imputation yielded a decrease in statistical power by 9, 43 and 35%, respectively. To test its capacity to discover novel associations, we applied summary statistics imputation to the GIANT height meta-analysis summary statistics covering HapMap variants, and identified 34 novel loci, 19 of which replicated using data in the UK Biobank. Additionally, we successfully replicated 55 out of the 111 variants published in an exome chip study. Our study demonstrates that summary statistics imputation is a very efficient and cost-effective way to identify and fine-map trait-associated loci. Moreover, the ability to impute summary statistics is important for follow-up analyses, such as Mendelian randomisation or LD-score regression.
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Evaluation and application of summary statistic imputation to discover new height-associated loci
2018-01-01
As most of the heritability of complex traits is attributed to common and low frequency genetic variants, imputing them by combining genotyping chips and large sequenced reference panels is the most cost-effective approach to discover the genetic basis of these traits. Association summary statistics from genome-wide meta-analyses are available for hundreds of traits. Updating these to ever-increasing reference panels is very cumbersome as it requires reimputation of the genetic data, rerunning the association scan, and meta-analysing the results. A much more efficient method is to directly impute the summary statistics, termed as summary statistics imputation, which we improved to accommodate variable sample size across SNVs. Its performance relative to genotype imputation and practical utility has not yet been fully investigated. To this end, we compared the two approaches on real (genotyped and imputed) data from 120K samples from the UK Biobank and show that, genotype imputation boasts a 3- to 5-fold lower root-mean-square error, and better distinguishes true associations from null ones: We observed the largest differences in power for variants with low minor allele frequency and low imputation quality. For fixed false positive rates of 0.001, 0.01, 0.05, using summary statistics imputation yielded a decrease in statistical power by 9, 43 and 35%, respectively. To test its capacity to discover novel associations, we applied summary statistics imputation to the GIANT height meta-analysis summary statistics covering HapMap variants, and identified 34 novel loci, 19 of which replicated using data in the UK Biobank. Additionally, we successfully replicated 55 out of the 111 variants published in an exome chip study. Our study demonstrates that summary statistics imputation is a very efficient and cost-effective way to identify and fine-map trait-associated loci. Moreover, the ability to impute summary statistics is important for follow-up analyses, such as Mendelian randomisation or LD-score regression. PMID:29782485
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DISSCO: direct imputation of summary statistics allowing covariates
Xu, Zheng; Duan, Qing; Yan, Song; Chen, Wei; Li, Mingyao; Lange, Ethan; Li, Yun
2015-01-01
Background: Imputation of individual level genotypes at untyped markers using an external reference panel of genotyped or sequenced individuals has become standard practice in genetic association studies. Direct imputation of summary statistics can also be valuable, for example in meta-analyses where individual level genotype data are not available. Two methods (DIST and ImpG-Summary/LD), that assume a multivariate Gaussian distribution for the association summary statistics, have been proposed for imputing association summary statistics. However, both methods assume that the correlations between association summary statistics are the same as the correlations between the corresponding genotypes. This assumption can be violated in the presence of confounding covariates. Methods: We analytically show that in the absence of covariates, correlation among association summary statistics is indeed the same as that among the corresponding genotypes, thus serving as a theoretical justification for the recently proposed methods. We continue to prove that in the presence of covariates, correlation among association summary statistics becomes the partial correlation of the corresponding genotypes controlling for covariates. We therefore develop direct imputation of summary statistics allowing covariates (DISSCO). Results: We consider two real-life scenarios where the correlation and partial correlation likely make practical difference: (i) association studies in admixed populations; (ii) association studies in presence of other confounding covariate(s). Application of DISSCO to real datasets under both scenarios shows at least comparable, if not better, performance compared with existing correlation-based methods, particularly for lower frequency variants. For example, DISSCO can reduce the absolute deviation from the truth by 3.9–15.2% for variants with minor allele frequency <5%. Availability and implementation: http://www.unc.edu/∼yunmli/DISSCO. Contact: yunli@med.unc.edu Supplementary information: Supplementary data are available at Bioinformatics online. PMID:25810429
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DISSCO: direct imputation of summary statistics allowing covariates.
Xu, Zheng; Duan, Qing; Yan, Song; Chen, Wei; Li, Mingyao; Lange, Ethan; Li, Yun
2015-08-01
Imputation of individual level genotypes at untyped markers using an external reference panel of genotyped or sequenced individuals has become standard practice in genetic association studies. Direct imputation of summary statistics can also be valuable, for example in meta-analyses where individual level genotype data are not available. Two methods (DIST and ImpG-Summary/LD), that assume a multivariate Gaussian distribution for the association summary statistics, have been proposed for imputing association summary statistics. However, both methods assume that the correlations between association summary statistics are the same as the correlations between the corresponding genotypes. This assumption can be violated in the presence of confounding covariates. We analytically show that in the absence of covariates, correlation among association summary statistics is indeed the same as that among the corresponding genotypes, thus serving as a theoretical justification for the recently proposed methods. We continue to prove that in the presence of covariates, correlation among association summary statistics becomes the partial correlation of the corresponding genotypes controlling for covariates. We therefore develop direct imputation of summary statistics allowing covariates (DISSCO). We consider two real-life scenarios where the correlation and partial correlation likely make practical difference: (i) association studies in admixed populations; (ii) association studies in presence of other confounding covariate(s). Application of DISSCO to real datasets under both scenarios shows at least comparable, if not better, performance compared with existing correlation-based methods, particularly for lower frequency variants. For example, DISSCO can reduce the absolute deviation from the truth by 3.9-15.2% for variants with minor allele frequency <5%. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.
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Weir, Christopher J; Butcher, Isabella; Assi, Valentina; Lewis, Stephanie C; Murray, Gordon D; Langhorne, Peter; Brady, Marian C
2018-03-07
Rigorous, informative meta-analyses rely on availability of appropriate summary statistics or individual participant data. For continuous outcomes, especially those with naturally skewed distributions, summary information on the mean or variability often goes unreported. While full reporting of original trial data is the ideal, we sought to identify methods for handling unreported mean or variability summary statistics in meta-analysis. We undertook two systematic literature reviews to identify methodological approaches used to deal with missing mean or variability summary statistics. Five electronic databases were searched, in addition to the Cochrane Colloquium abstract books and the Cochrane Statistics Methods Group mailing list archive. We also conducted cited reference searching and emailed topic experts to identify recent methodological developments. Details recorded included the description of the method, the information required to implement the method, any underlying assumptions and whether the method could be readily applied in standard statistical software. We provided a summary description of the methods identified, illustrating selected methods in example meta-analysis scenarios. For missing standard deviations (SDs), following screening of 503 articles, fifteen methods were identified in addition to those reported in a previous review. These included Bayesian hierarchical modelling at the meta-analysis level; summary statistic level imputation based on observed SD values from other trials in the meta-analysis; a practical approximation based on the range; and algebraic estimation of the SD based on other summary statistics. Following screening of 1124 articles for methods estimating the mean, one approximate Bayesian computation approach and three papers based on alternative summary statistics were identified. Illustrative meta-analyses showed that when replacing a missing SD the approximation using the range minimised loss of precision and generally performed better than omitting trials. When estimating missing means, a formula using the median, lower quartile and upper quartile performed best in preserving the precision of the meta-analysis findings, although in some scenarios, omitting trials gave superior results. Methods based on summary statistics (minimum, maximum, lower quartile, upper quartile, median) reported in the literature facilitate more comprehensive inclusion of randomised controlled trials with missing mean or variability summary statistics within meta-analyses.
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Yang, Yi; Tokita, Midori; Ishiguchi, Akira
2018-01-01
A number of studies revealed that our visual system can extract different types of summary statistics, such as the mean and variance, from sets of items. Although the extraction of such summary statistics has been studied well in isolation, the relationship between these statistics remains unclear. In this study, we explored this issue using an individual differences approach. Observers viewed illustrations of strawberries and lollypops varying in size or orientation and performed four tasks in a within-subject design, namely mean and variance discrimination tasks with size and orientation domains. We found that the performances in the mean and variance discrimination tasks were not correlated with each other and demonstrated that extractions of the mean and variance are mediated by different representation mechanisms. In addition, we tested the relationship between performances in size and orientation domains for each summary statistic (i.e. mean and variance) and examined whether each summary statistic has distinct processes across perceptual domains. The results illustrated that statistical summary representations of size and orientation may share a common mechanism for representing the mean and possibly for representing variance. Introspections for each observer performing the tasks were also examined and discussed.
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Summary and Statistical Analysis of the First AIAA Sonic Boom Prediction Workshop
NASA Technical Reports Server (NTRS)
Park, Michael A.; Morgenstern, John M.
2014-01-01
A summary is provided for the First AIAA Sonic Boom Workshop held 11 January 2014 in conjunction with AIAA SciTech 2014. Near-field pressure signatures extracted from computational fluid dynamics solutions are gathered from nineteen participants representing three countries for the two required cases, an axisymmetric body and simple delta wing body. Structured multiblock, unstructured mixed-element, unstructured tetrahedral, overset, and Cartesian cut-cell methods are used by the participants. Participants provided signatures computed on participant generated and solution adapted grids. Signatures are also provided for a series of uniformly refined workshop provided grids. These submissions are propagated to the ground and loudness measures are computed. This allows the grid convergence of a loudness measure and a validation metric (dfference norm between computed and wind tunnel measured near-field signatures) to be studied for the first time. Statistical analysis is also presented for these measures. An optional configuration includes fuselage, wing, tail, flow-through nacelles, and blade sting. This full configuration exhibits more variation in eleven submissions than the sixty submissions provided for each required case. Recommendations are provided for potential improvements to the analysis methods and a possible subsequent workshop.
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Summary Writing: A Topographical Study.
ERIC Educational Resources Information Center
Sherrard, Carol
1986-01-01
Examines summaries of expository text written by undergraduate students to discover the nature of text-to-summary mapping. Finds that simple omission and one-to-one mapping of text sentences into summary sentences were the most favored strategies. (FL)
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Matrix population models from 20 studies of perennial plant populations
Ellis, Martha M.; Williams, Jennifer L.; Lesica, Peter; Bell, Timothy J.; Bierzychudek, Paulette; Bowles, Marlin; Crone, Elizabeth E.; Doak, Daniel F.; Ehrlen, Johan; Ellis-Adam, Albertine; McEachern, Kathryn; Ganesan, Rengaian; Latham, Penelope; Luijten, Sheila; Kaye, Thomas N.; Knight, Tiffany M.; Menges, Eric S.; Morris, William F.; den Nijs, Hans; Oostermeijer, Gerard; Quintana-Ascencio, Pedro F.; Shelly, J. Stephen; Stanley, Amanda; Thorpe, Andrea; Tamara, Ticktin; Valverde, Teresa; Weekley, Carl W.
2012-01-01
Demographic transition matrices are one of the most commonly applied population models for both basic and applied ecological research. The relatively simple framework of these models and simple, easily interpretable summary statistics they produce have prompted the wide use of these models across an exceptionally broad range of taxa. Here, we provide annual transition matrices and observed stage structures/population sizes for 20 perennial plant species which have been the focal species for long-term demographic monitoring. These data were assembled as part of the "Testing Matrix Models" working group through the National Center for Ecological Analysis and Synthesis (NCEAS). In sum, these data represent 82 populations with >460 total population-years of data. It is our hope that making these data available will help promote and improve our ability to monitor and understand plant population dynamics.
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Matrix population models from 20 studies of perennial plant populations
Ellis, Martha M.; Williams, Jennifer L.; Lesica, Peter; Bell, Timothy J.; Bierzychudek, Paulette; Bowles, Marlin; Crone, Elizabeth E.; Doak, Daniel F.; Ehrlen, Johan; Ellis-Adam, Albertine; McEachern, Kathryn; Ganesan, Rengaian; Latham, Penelope; Luijten, Sheila; Kaye, Thomas N.; Knight, Tiffany M.; Menges, Eric S.; Morris, William F.; den Nijs, Hans; Oostermeijer, Gerard; Quintana-Ascencio, Pedro F.; Shelly, J. Stephen; Stanley, Amanda; Thorpe, Andrea; Tamara, Ticktin; Valverde, Teresa; Weekley, Carl W.
2012-01-01
Demographic transition matrices are one of the most commonly applied population models for both basic and applied ecological research. The relatively simple framework of these models and simple, easily interpretable summary statistics they produce have prompted the wide use of these models across an exceptionally broad range of taxa. Here, we provide annual transition matrices and observed stage structures/population sizes for 20 perennial plant species which have been the focal species for long-term demographic monitoring. These data were assembled as part of the 'Testing Matrix Models' working group through the National Center for Ecological Analysis and Synthesis (NCEAS). In sum, these data represent 82 populations with >460 total population-years of data. It is our hope that making these data available will help promote and improve our ability to monitor and understand plant population dynamics.
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Exploring Marine Corps Officer Quality: An Analysis of Promotion to Lieutenant Colonel
2017-03-01
44 G. DESCRIPTIVE STATISTICS ................................................................44 1. Dependent...Variable Summary Statistics ...................................44 2. Performance...87 4. Further Research .........................................................................88 APPENDIX A. SUMMARY STATISTICS OF FITREP AND
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Yang, Yi; Tokita, Midori; Ishiguchi, Akira
2018-01-01
A number of studies revealed that our visual system can extract different types of summary statistics, such as the mean and variance, from sets of items. Although the extraction of such summary statistics has been studied well in isolation, the relationship between these statistics remains unclear. In this study, we explored this issue using an individual differences approach. Observers viewed illustrations of strawberries and lollypops varying in size or orientation and performed four tasks in a within-subject design, namely mean and variance discrimination tasks with size and orientation domains. We found that the performances in the mean and variance discrimination tasks were not correlated with each other and demonstrated that extractions of the mean and variance are mediated by different representation mechanisms. In addition, we tested the relationship between performances in size and orientation domains for each summary statistic (i.e. mean and variance) and examined whether each summary statistic has distinct processes across perceptual domains. The results illustrated that statistical summary representations of size and orientation may share a common mechanism for representing the mean and possibly for representing variance. Introspections for each observer performing the tasks were also examined and discussed. PMID:29399318
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2015-12-01
WAIVERS ..............................................................................................49 APPENDIX C. DESCRIPTIVE STATISTICS ... Statistics of Dependent Variables. .............................................23 Table 6. Summary Statistics of Academics Variables...24 Table 7. Summary Statistics of Application Variables ............................................25 Table 8
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DOT National Transportation Integrated Search
2001-01-01
Airport Activity Statistics of Certificated Air Carriers: Summary Tables presents summary data for : all scheduled and nonscheduled service by large certificated U.S. air carriersincluding the volume : of passenger, freight, and mail enplanements,...
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Falgreen, Steffen; Laursen, Maria Bach; Bødker, Julie Støve; Kjeldsen, Malene Krag; Schmitz, Alexander; Nyegaard, Mette; Johnsen, Hans Erik; Dybkær, Karen; Bøgsted, Martin
2014-06-05
In vitro generated dose-response curves of human cancer cell lines are widely used to develop new therapeutics. The curves are summarised by simplified statistics that ignore the conventionally used dose-response curves' dependency on drug exposure time and growth kinetics. This may lead to suboptimal exploitation of data and biased conclusions on the potential of the drug in question. Therefore we set out to improve the dose-response assessments by eliminating the impact of time dependency. First, a mathematical model for drug induced cell growth inhibition was formulated and used to derive novel dose-response curves and improved summary statistics that are independent of time under the proposed model. Next, a statistical analysis workflow for estimating the improved statistics was suggested consisting of 1) nonlinear regression models for estimation of cell counts and doubling times, 2) isotonic regression for modelling the suggested dose-response curves, and 3) resampling based method for assessing variation of the novel summary statistics. We document that conventionally used summary statistics for dose-response experiments depend on time so that fast growing cell lines compared to slowly growing ones are considered overly sensitive. The adequacy of the mathematical model is tested for doxorubicin and found to fit real data to an acceptable degree. Dose-response data from the NCI60 drug screen were used to illustrate the time dependency and demonstrate an adjustment correcting for it. The applicability of the workflow was illustrated by simulation and application on a doxorubicin growth inhibition screen. The simulations show that under the proposed mathematical model the suggested statistical workflow results in unbiased estimates of the time independent summary statistics. Variance estimates of the novel summary statistics are used to conclude that the doxorubicin screen covers a significant diverse range of responses ensuring it is useful for biological interpretations. Time independent summary statistics may aid the understanding of drugs' action mechanism on tumour cells and potentially renew previous drug sensitivity evaluation studies.
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2014-01-01
Background In vitro generated dose-response curves of human cancer cell lines are widely used to develop new therapeutics. The curves are summarised by simplified statistics that ignore the conventionally used dose-response curves’ dependency on drug exposure time and growth kinetics. This may lead to suboptimal exploitation of data and biased conclusions on the potential of the drug in question. Therefore we set out to improve the dose-response assessments by eliminating the impact of time dependency. Results First, a mathematical model for drug induced cell growth inhibition was formulated and used to derive novel dose-response curves and improved summary statistics that are independent of time under the proposed model. Next, a statistical analysis workflow for estimating the improved statistics was suggested consisting of 1) nonlinear regression models for estimation of cell counts and doubling times, 2) isotonic regression for modelling the suggested dose-response curves, and 3) resampling based method for assessing variation of the novel summary statistics. We document that conventionally used summary statistics for dose-response experiments depend on time so that fast growing cell lines compared to slowly growing ones are considered overly sensitive. The adequacy of the mathematical model is tested for doxorubicin and found to fit real data to an acceptable degree. Dose-response data from the NCI60 drug screen were used to illustrate the time dependency and demonstrate an adjustment correcting for it. The applicability of the workflow was illustrated by simulation and application on a doxorubicin growth inhibition screen. The simulations show that under the proposed mathematical model the suggested statistical workflow results in unbiased estimates of the time independent summary statistics. Variance estimates of the novel summary statistics are used to conclude that the doxorubicin screen covers a significant diverse range of responses ensuring it is useful for biological interpretations. Conclusion Time independent summary statistics may aid the understanding of drugs’ action mechanism on tumour cells and potentially renew previous drug sensitivity evaluation studies. PMID:24902483
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Why Education Predicts Decreased Belief in Conspiracy Theories
2016-01-01
Summary People with high education are less likely than people with low education to believe in conspiracy theories. It is yet unclear why these effects occur, however, as education predicts a range of cognitive, emotional, and social outcomes. The present research sought to identify mediators of the relationship between education and conspiracy beliefs. Results of Study 1 revealed three independent mediators of this relationship, namely, belief in simple solutions for complex problems, feelings of powerlessness, and subjective social class. A nationally representative sample (Study 2) replicated these findings except for subjective social class. Moreover, variations in analytic thinking statistically accounted for the path through belief in simple solutions. I conclude that the relationship between education and conspiracy beliefs cannot be reduced to a single mechanism but is the result of the complex interplay of multiple psychological factors that are associated with education. © 2016 The Authors. Applied Cognitive Psychology published by John Wiley & Sons Ltd. PMID:28163371
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van Rhee, Henk; Hak, Tony
2017-01-01
We present a new tool for meta‐analysis, Meta‐Essentials, which is free of charge and easy to use. In this paper, we introduce the tool and compare its features to other tools for meta‐analysis. We also provide detailed information on the validation of the tool. Although free of charge and simple, Meta‐Essentials automatically calculates effect sizes from a wide range of statistics and can be used for a wide range of meta‐analysis applications, including subgroup analysis, moderator analysis, and publication bias analyses. The confidence interval of the overall effect is automatically based on the Knapp‐Hartung adjustment of the DerSimonian‐Laird estimator. However, more advanced meta‐analysis methods such as meta‐analytical structural equation modelling and meta‐regression with multiple covariates are not available. In summary, Meta‐Essentials may prove a valuable resource for meta‐analysts, including researchers, teachers, and students. PMID:28801932
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“Plateau”-related summary statistics are uninformative for comparing working memory models
van den Berg, Ronald; Ma, Wei Ji
2014-01-01
Performance on visual working memory tasks decreases as more items need to be remembered. Over the past decade, a debate has unfolded between proponents of slot models and slotless models of this phenomenon. Zhang and Luck (2008) and Anderson, Vogel, and Awh (2011) noticed that as more items need to be remembered, “memory noise” seems to first increase and then reach a “stable plateau.” They argued that three summary statistics characterizing this plateau are consistent with slot models, but not with slotless models. Here, we assess the validity of their methods. We generated synthetic data both from a leading slot model and from a recent slotless model and quantified model evidence using log Bayes factors. We found that the summary statistics provided, at most, 0.15% of the expected model evidence in the raw data. In a model recovery analysis, a total of more than a million trials were required to achieve 99% correct recovery when models were compared on the basis of summary statistics, whereas fewer than 1,000 trials were sufficient when raw data were used. At realistic numbers of trials, plateau-related summary statistics are completely unreliable for model comparison. Applying the same analyses to subject data from Anderson et al. (2011), we found that the evidence in the summary statistics was, at most, 0.12% of the evidence in the raw data and far too weak to warrant any conclusions. These findings call into question claims about working memory that are based on summary statistics. PMID:24719235
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Statistical summaries of selected Iowa streamflow data through September 2013
Eash, David A.; O'Shea, Padraic S.; Weber, Jared R.; Nguyen, Kevin T.; Montgomery, Nicholas L.; Simonson, Adrian J.
2016-01-04
Statistical summaries of streamflow data collected at 184 streamgages in Iowa are presented in this report. All streamgages included for analysis have at least 10 years of continuous record collected before or through September 2013. This report is an update to two previously published reports that presented statistical summaries of selected Iowa streamflow data through September 1988 and September 1996. The statistical summaries include (1) monthly and annual flow durations, (2) annual exceedance probabilities of instantaneous peak discharges (flood frequencies), (3) annual exceedance probabilities of high discharges, and (4) annual nonexceedance probabilities of low discharges and seasonal low discharges. Also presented for each streamgage are graphs of the annual mean discharges, mean annual mean discharges, 50-percent annual flow-duration discharges (median flows), harmonic mean flows, mean daily mean discharges, and flow-duration curves. Two sets of statistical summaries are presented for each streamgage, which include (1) long-term statistics for the entire period of streamflow record and (2) recent-term statistics for or during the 30-year period of record from 1984 to 2013. The recent-term statistics are only calculated for streamgages with streamflow records pre-dating the 1984 water year and with at least 10 years of record during 1984–2013. The streamflow statistics in this report are not adjusted for the effects of water use; although some of this water is used consumptively, most of it is returned to the streams.
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Multiple Phenotype Association Tests Using Summary Statistics in Genome-Wide Association Studies
Liu, Zhonghua; Lin, Xihong
2017-01-01
Summary We study in this paper jointly testing the associations of a genetic variant with correlated multiple phenotypes using the summary statistics of individual phenotype analysis from Genome-Wide Association Studies (GWASs). We estimated the between-phenotype correlation matrix using the summary statistics of individual phenotype GWAS analyses, and developed genetic association tests for multiple phenotypes by accounting for between-phenotype correlation without the need to access individual-level data. Since genetic variants often affect multiple phenotypes differently across the genome and the between-phenotype correlation can be arbitrary, we proposed robust and powerful multiple phenotype testing procedures by jointly testing a common mean and a variance component in linear mixed models for summary statistics. We computed the p-values of the proposed tests analytically. This computational advantage makes our methods practically appealing in large-scale GWASs. We performed simulation studies to show that the proposed tests maintained correct type I error rates, and to compare their powers in various settings with the existing methods. We applied the proposed tests to a GWAS Global Lipids Genetics Consortium summary statistics data set and identified additional genetic variants that were missed by the original single-trait analysis. PMID:28653391
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19 CFR 103.31 - Information on vessel manifests and summary statistical reports.
Code of Federal Regulations, 2011 CFR
2011-04-01
... statistical reports. 103.31 Section 103.31 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF... Restricted Access § 103.31 Information on vessel manifests and summary statistical reports. (a) Disclosure to... statistical reports of imports and exports and to copy therefrom for publication information and data subject...
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19 CFR 103.31 - Information on vessel manifests and summary statistical reports.
Code of Federal Regulations, 2010 CFR
2010-04-01
... statistical reports. 103.31 Section 103.31 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF... Restricted Access § 103.31 Information on vessel manifests and summary statistical reports. (a) Disclosure to... statistical reports of imports and exports and to copy therefrom for publication information and data subject...
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Guo, Ying; Little, Roderick J; McConnell, Daniel S
2012-01-01
Covariate measurement error is common in epidemiologic studies. Current methods for correcting measurement error with information from external calibration samples are insufficient to provide valid adjusted inferences. We consider the problem of estimating the regression of an outcome Y on covariates X and Z, where Y and Z are observed, X is unobserved, but a variable W that measures X with error is observed. Information about measurement error is provided in an external calibration sample where data on X and W (but not Y and Z) are recorded. We describe a method that uses summary statistics from the calibration sample to create multiple imputations of the missing values of X in the regression sample, so that the regression coefficients of Y on X and Z and associated standard errors can be estimated using simple multiple imputation combining rules, yielding valid statistical inferences under the assumption of a multivariate normal distribution. The proposed method is shown by simulation to provide better inferences than existing methods, namely the naive method, classical calibration, and regression calibration, particularly for correction for bias and achieving nominal confidence levels. We also illustrate our method with an example using linear regression to examine the relation between serum reproductive hormone concentrations and bone mineral density loss in midlife women in the Michigan Bone Health and Metabolism Study. Existing methods fail to adjust appropriately for bias due to measurement error in the regression setting, particularly when measurement error is substantial. The proposed method corrects this deficiency.
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Fast and accurate imputation of summary statistics enhances evidence of functional enrichment
Pasaniuc, Bogdan; Zaitlen, Noah; Shi, Huwenbo; Bhatia, Gaurav; Gusev, Alexander; Pickrell, Joseph; Hirschhorn, Joel; Strachan, David P.; Patterson, Nick; Price, Alkes L.
2014-01-01
Motivation: Imputation using external reference panels (e.g. 1000 Genomes) is a widely used approach for increasing power in genome-wide association studies and meta-analysis. Existing hidden Markov models (HMM)-based imputation approaches require individual-level genotypes. Here, we develop a new method for Gaussian imputation from summary association statistics, a type of data that is becoming widely available. Results: In simulations using 1000 Genomes (1000G) data, this method recovers 84% (54%) of the effective sample size for common (>5%) and low-frequency (1–5%) variants [increasing to 87% (60%) when summary linkage disequilibrium information is available from target samples] versus the gold standard of 89% (67%) for HMM-based imputation, which cannot be applied to summary statistics. Our approach accounts for the limited sample size of the reference panel, a crucial step to eliminate false-positive associations, and it is computationally very fast. As an empirical demonstration, we apply our method to seven case–control phenotypes from the Wellcome Trust Case Control Consortium (WTCCC) data and a study of height in the British 1958 birth cohort (1958BC). Gaussian imputation from summary statistics recovers 95% (105%) of the effective sample size (as quantified by the ratio of χ2 association statistics) compared with HMM-based imputation from individual-level genotypes at the 227 (176) published single nucleotide polymorphisms (SNPs) in the WTCCC (1958BC height) data. In addition, for publicly available summary statistics from large meta-analyses of four lipid traits, we publicly release imputed summary statistics at 1000G SNPs, which could not have been obtained using previously published methods, and demonstrate their accuracy by masking subsets of the data. We show that 1000G imputation using our approach increases the magnitude and statistical evidence of enrichment at genic versus non-genic loci for these traits, as compared with an analysis without 1000G imputation. Thus, imputation of summary statistics will be a valuable tool in future functional enrichment analyses. Availability and implementation: Publicly available software package available at http://bogdan.bioinformatics.ucla.edu/software/. Contact: bpasaniuc@mednet.ucla.edu or aprice@hsph.harvard.edu Supplementary information: Supplementary materials are available at Bioinformatics online. PMID:24990607
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"Plateau"-related summary statistics are uninformative for comparing working memory models.
van den Berg, Ronald; Ma, Wei Ji
2014-10-01
Performance on visual working memory tasks decreases as more items need to be remembered. Over the past decade, a debate has unfolded between proponents of slot models and slotless models of this phenomenon (Ma, Husain, Bays (Nature Neuroscience 17, 347-356, 2014). Zhang and Luck (Nature 453, (7192), 233-235, 2008) and Anderson, Vogel, and Awh (Attention, Perception, Psychophys 74, (5), 891-910, 2011) noticed that as more items need to be remembered, "memory noise" seems to first increase and then reach a "stable plateau." They argued that three summary statistics characterizing this plateau are consistent with slot models, but not with slotless models. Here, we assess the validity of their methods. We generated synthetic data both from a leading slot model and from a recent slotless model and quantified model evidence using log Bayes factors. We found that the summary statistics provided at most 0.15 % of the expected model evidence in the raw data. In a model recovery analysis, a total of more than a million trials were required to achieve 99 % correct recovery when models were compared on the basis of summary statistics, whereas fewer than 1,000 trials were sufficient when raw data were used. Therefore, at realistic numbers of trials, plateau-related summary statistics are highly unreliable for model comparison. Applying the same analyses to subject data from Anderson et al. (Attention, Perception, Psychophys 74, (5), 891-910, 2011), we found that the evidence in the summary statistics was at most 0.12 % of the evidence in the raw data and far too weak to warrant any conclusions. The evidence in the raw data, in fact, strongly favored the slotless model. These findings call into question claims about working memory that are based on summary statistics.
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Certification Can Count: The Case of Aircraft Mechanics. Issues in Labor Statistics. Summary 02-03.
ERIC Educational Resources Information Center
Bureau of Labor Statistics, Washington, DC.
This document is a summary of aerospace industry technician statistics gathered by the Occupational Employment Statistics Survey for the year 2000 by the Department of Labor, Bureau of Labor Statistics. The data includes the following: (1) a comparison of wages earned by Federal Aviation Administration (FAA) certified and non-FAA certified…
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A Simple Test of Class-Level Genetic Association Can Reveal Novel Cardiometabolic Trait Loci.
Qian, Jing; Nunez, Sara; Reed, Eric; Reilly, Muredach P; Foulkes, Andrea S
2016-01-01
Characterizing the genetic determinants of complex diseases can be further augmented by incorporating knowledge of underlying structure or classifications of the genome, such as newly developed mappings of protein-coding genes, epigenetic marks, enhancer elements and non-coding RNAs. We apply a simple class-level testing framework, termed Genetic Class Association Testing (GenCAT), to identify protein-coding gene association with 14 cardiometabolic (CMD) related traits across 6 publicly available genome wide association (GWA) meta-analysis data resources. GenCAT uses SNP-level meta-analysis test statistics across all SNPs within a class of elements, as well as the size of the class and its unique correlation structure, to determine if the class is statistically meaningful. The novelty of findings is evaluated through investigation of regional signals. A subset of findings are validated using recently updated, larger meta-analysis resources. A simulation study is presented to characterize overall performance with respect to power, control of family-wise error and computational efficiency. All analysis is performed using the GenCAT package, R version 3.2.1. We demonstrate that class-level testing complements the common first stage minP approach that involves individual SNP-level testing followed by post-hoc ascribing of statistically significant SNPs to genes and loci. GenCAT suggests 54 protein-coding genes at 41 distinct loci for the 13 CMD traits investigated in the discovery analysis, that are beyond the discoveries of minP alone. An additional application to biological pathways demonstrates flexibility in defining genetic classes. We conclude that it would be prudent to include class-level testing as standard practice in GWA analysis. GenCAT, for example, can be used as a simple, complementary and efficient strategy for class-level testing that leverages existing data resources, requires only summary level data in the form of test statistics, and adds significant value with respect to its potential for identifying multiple novel and clinically relevant trait associations.
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Madan, Christopher R
2014-01-01
When studying animal behaviour within an open environment, movement-related data are often important for behavioural analyses. Therefore, simple and efficient techniques are needed to present and analyze the data of such movements. However, it is challenging to present both spatial and temporal information of movements within a two-dimensional image representation. To address this challenge, we developed the spectral time-lapse (STL) algorithm that re-codes an animal’s position at every time point with a time-specific color, and overlays it with a reference frame of the video, to produce a summary image. We additionally incorporated automated motion tracking, such that the animal’s position can be extracted and summary statistics such as path length and duration can be calculated, as well as instantaneous velocity and acceleration. Here we describe the STL algorithm and offer a freely available MATLAB toolbox that implements the algorithm and allows for a large degree of end-user control and flexibility. PMID:25580219
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WIND Toolkit Offshore Summary Dataset
DOE Office of Scientific and Technical Information (OSTI.GOV)
Draxl, Caroline; Musial, Walt; Scott, George
This dataset contains summary statistics for offshore wind resources for the continental United States derived from the Wind Integration National Datatset (WIND) Toolkit. These data are available in two formats: GDB - Compressed geodatabases containing statistical summaries aligned with lease blocks (aliquots) stored in a GIS format. These data are partitioned into Pacific, Atlantic, and Gulf resource regions. HDF5 - Statistical summaries of all points in the offshore Pacific, Atlantic, and Gulf offshore regions. These data are located on the original WIND Toolkit grid and have not been reassigned or downsampled to lease blocks. These data were developed under contractmore » by NREL for the Bureau of Oceanic Energy Management (BOEM).« less
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ERIC Educational Resources Information Center
Williams, Immanuel James; Williams, Kelley Kim
2016-01-01
Understanding summary statistics and graphical techniques are building blocks to comprehending concepts beyond basic statistics. It's known that motivated students perform better in school. Using examples that students find engaging allows them to understand the concepts at a deeper level.
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Hanford Works monthly report, October 1952
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1952-11-20
this document presents a summary of work and progress at the Hanford Engineer works for October 1952. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Works monthly report, February 1953
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1953-03-18
This document presents a summary of work and progress at the Hanford Engineer Works for February 1953. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Service departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Works monthly report, August 1952
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1952-09-24
This document presents a summary of work and progress at the Hanford Engineer Works for August 1952. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department` section summaries work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical,Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Real Estatemore » and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Works monthly report, September 1952
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1952-10-20
This document presents a summary of work and progress at the Hanford Engineer Works for September 1952. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work for the Technical Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Spatial prediction of soil texture in region Centre (France) from summary data
NASA Astrophysics Data System (ADS)
Dobarco, Mercedes Roman; Saby, Nicolas; Paroissien, Jean-Baptiste; Orton, Tom G.
2015-04-01
Soil texture is a key controlling factor of important soil functions like water and nutrient holding capacity, retention of pollutants, drainage, soil biodiversity, and C cycling. High resolution soil texture maps enhance our understanding of the spatial distribution of soil properties and provide valuable information for decision making and crop management, environmental protection, and hydrological planning. We predicted the soil texture of agricultural topsoils in the Region Centre (France) combining regression and area-to-point kriging. Soil texture data was collected from the French soil-test database (BDAT), which is populated with soil analysis performed by farmers' demand. To protect the anonymity of the farms the data was treated by commune. In a first step, summary statistics of environmental covariates by commune were used to develop prediction models with Cubist, boosted regression trees, and random forests. In a second step the residuals of each individual observation were summarized by commune and kriged following the method developed by Orton et al. (2012). This approach allowed to include non-linear relationships among covariates and soil texture while accounting for the uncertainty on areal means in the area-to-point kriging step. Independent validation of the models was done using data from the systematic soil monitoring network of French soils. Future work will compare the performance of these models with a non-stationary variance geostatistical model using the most important covariates and summary statistics of texture data. The results will inform on whether the later and statistically more-challenging approach improves significantly texture predictions or whether the more simple area-to-point regression kriging can offer satisfactory results. The application of area-to-point regression kriging at national level using BDAT data has the potential to improve soil texture predictions for agricultural topsoils, especially when combined with existing maps (i.e., model ensemble).
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Code of Federal Regulations, 2012 CFR
2012-10-01
... Secretary of Transportation PROCEDURES FOR TRANSPORTATION WORKPLACE DRUG AND ALCOHOL TESTING PROGRAMS Drug Testing Laboratories § 40.111 When and how must a laboratory disclose statistical summaries and other... a report indicating that not enough testing was conducted to warrant a summary. You may transmit the...
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Code of Federal Regulations, 2014 CFR
2014-10-01
... Secretary of Transportation PROCEDURES FOR TRANSPORTATION WORKPLACE DRUG AND ALCOHOL TESTING PROGRAMS Drug Testing Laboratories § 40.111 When and how must a laboratory disclose statistical summaries and other... a report indicating that not enough testing was conducted to warrant a summary. You may transmit the...
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Code of Federal Regulations, 2011 CFR
2011-10-01
... Secretary of Transportation PROCEDURES FOR TRANSPORTATION WORKPLACE DRUG AND ALCOHOL TESTING PROGRAMS Drug Testing Laboratories § 40.111 When and how must a laboratory disclose statistical summaries and other... a report indicating that not enough testing was conducted to warrant a summary. You may transmit the...
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Code of Federal Regulations, 2013 CFR
2013-10-01
... Secretary of Transportation PROCEDURES FOR TRANSPORTATION WORKPLACE DRUG AND ALCOHOL TESTING PROGRAMS Drug Testing Laboratories § 40.111 When and how must a laboratory disclose statistical summaries and other... a report indicating that not enough testing was conducted to warrant a summary. You may transmit the...
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2012 statistical summaries : FTA grant assistance programs.
DOT National Transportation Integrated Search
2013-12-01
The 2012 Statistical Summaries provides information about the Federal Transit Administrations (FTA) major financial aid programs for : Federal Fiscal Year (FY) 2012. The report covers the following programs: Urbanized Area Formula, Non-urbanized A...
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2011 statistical summaries : FTA grant assistance programs.
DOT National Transportation Integrated Search
2013-05-01
The 2011 Statistical Summaries provides information about the Federal Transit Administrations (FTA) major financial aid programs for Federal Fiscal Year (FY) 2011. The report covers the following programs: Urbanized Area Formula, Non-urbanized Are...
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2010 statistical summaries : FTA grant assistance programs.
DOT National Transportation Integrated Search
2013-07-01
The 2010 Statistical Summaries provides information about the Federal Transit Administrations (FTA) major financial aid programs for Federal Fiscal Year (FY) 2010. The report covers the following programs: Urbanized Area Formula, Non-urbanized Are...
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American Recovery and Reinvestment Act (ARRA) statistical summaries.
DOT National Transportation Integrated Search
2012-05-01
The American Recovery and Reinvestment Act (ARRA) Statistical Summaries provide information about the Federal Transit Administrations (FTA) financial investment programs funded through ARRA.This report covers the Urbanized Area Formula Program and...
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Fast and accurate imputation of summary statistics enhances evidence of functional enrichment.
Pasaniuc, Bogdan; Zaitlen, Noah; Shi, Huwenbo; Bhatia, Gaurav; Gusev, Alexander; Pickrell, Joseph; Hirschhorn, Joel; Strachan, David P; Patterson, Nick; Price, Alkes L
2014-10-15
Imputation using external reference panels (e.g. 1000 Genomes) is a widely used approach for increasing power in genome-wide association studies and meta-analysis. Existing hidden Markov models (HMM)-based imputation approaches require individual-level genotypes. Here, we develop a new method for Gaussian imputation from summary association statistics, a type of data that is becoming widely available. In simulations using 1000 Genomes (1000G) data, this method recovers 84% (54%) of the effective sample size for common (>5%) and low-frequency (1-5%) variants [increasing to 87% (60%) when summary linkage disequilibrium information is available from target samples] versus the gold standard of 89% (67%) for HMM-based imputation, which cannot be applied to summary statistics. Our approach accounts for the limited sample size of the reference panel, a crucial step to eliminate false-positive associations, and it is computationally very fast. As an empirical demonstration, we apply our method to seven case-control phenotypes from the Wellcome Trust Case Control Consortium (WTCCC) data and a study of height in the British 1958 birth cohort (1958BC). Gaussian imputation from summary statistics recovers 95% (105%) of the effective sample size (as quantified by the ratio of [Formula: see text] association statistics) compared with HMM-based imputation from individual-level genotypes at the 227 (176) published single nucleotide polymorphisms (SNPs) in the WTCCC (1958BC height) data. In addition, for publicly available summary statistics from large meta-analyses of four lipid traits, we publicly release imputed summary statistics at 1000G SNPs, which could not have been obtained using previously published methods, and demonstrate their accuracy by masking subsets of the data. We show that 1000G imputation using our approach increases the magnitude and statistical evidence of enrichment at genic versus non-genic loci for these traits, as compared with an analysis without 1000G imputation. Thus, imputation of summary statistics will be a valuable tool in future functional enrichment analyses. Publicly available software package available at http://bogdan.bioinformatics.ucla.edu/software/. bpasaniuc@mednet.ucla.edu or aprice@hsph.harvard.edu Supplementary materials are available at Bioinformatics online. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.
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Hanford Atomic Products Operation monthly report, March 1954
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1954-04-23
This document presents a summary of work and progress at the Hanford Engineer Works for March 1954. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Service departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, June 1954
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1954-07-26
This document presents a summary of work and progress at the Hanford Engineer Works for June 1954. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, May 1954
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1954-06-22
This document presents a summary of work and progress at the Hanford Engineer Works for May 1954. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Science, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, October 1953
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1953-11-20
This document presents a summary of work and progress at the Hanford Engineer Works for October 1953. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services. Employee and Public Relations, and Community Realmore » Estate and Service departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, May 1953
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
This document presents a summary of work and progress at the Hanford Engineer Works for May 1953. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, July 1953
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1953-08-20
This document presents a summary of work and progress at the Hanford Engineer Works for July 1953. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report for September 1954
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1954-10-25
This document presents a summary of work and progress at the Hanford Engineer Works for September 1954. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, June 1953
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1953-07-22
This document presents a summary of work and progress at the Hanford Engineer Works for June 1953. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Real Estatemore » and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, December 1953
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1954-01-22
This document presents a summary of work and progress at the Hanford Engineer Works for December 1953. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summaries work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Facts about Newspapers '86: A Statistical Summary of the Newspaper Business.
ERIC Educational Resources Information Center
American Newspaper Publishers Association, Washington, DC.
Attesting to the continuing economic strength and institutional vitality of the newspaper business in 1985, this booklet presents a statistical summary of the industry in the United States and Canada. The statistics cover a wide range of topics, including (1) number of daily newspapers, (2) daily newspaper circulation, (3) daily newspapers by…
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Facts about Newspapers '85: A Statistical Summary of the Newspaper Business.
ERIC Educational Resources Information Center
American Newspaper Publishers Association, Washington, DC.
A statistical summary of the newspaper industry for 1984 and previous years is presented in this brochure. Focusing primarily on the United States newspaper industry, the brochure also contains some information on Canadian newspapers. The brochure presents statistics in the following categories: (1) number of daily newspapers, (2) daily newspaper…
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32 CFR 865.122 - Summary of statistics for Discharge Review Board.
Code of Federal Regulations, 2010 CFR
2010-07-01
... 32 National Defense 6 2010-07-01 2010-07-01 false Summary of statistics for Discharge Review Board. 865.122 Section 865.122 National Defense Department of Defense (Continued) DEPARTMENT OF THE AIR FORCE... statistics for Discharge Review Board. The Air Force Discharge Review Board shall prepare and provide to the...
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Multiple phenotype association tests using summary statistics in genome-wide association studies.
Liu, Zhonghua; Lin, Xihong
2018-03-01
We study in this article jointly testing the associations of a genetic variant with correlated multiple phenotypes using the summary statistics of individual phenotype analysis from Genome-Wide Association Studies (GWASs). We estimated the between-phenotype correlation matrix using the summary statistics of individual phenotype GWAS analyses, and developed genetic association tests for multiple phenotypes by accounting for between-phenotype correlation without the need to access individual-level data. Since genetic variants often affect multiple phenotypes differently across the genome and the between-phenotype correlation can be arbitrary, we proposed robust and powerful multiple phenotype testing procedures by jointly testing a common mean and a variance component in linear mixed models for summary statistics. We computed the p-values of the proposed tests analytically. This computational advantage makes our methods practically appealing in large-scale GWASs. We performed simulation studies to show that the proposed tests maintained correct type I error rates, and to compare their powers in various settings with the existing methods. We applied the proposed tests to a GWAS Global Lipids Genetics Consortium summary statistics data set and identified additional genetic variants that were missed by the original single-trait analysis. © 2017, The International Biometric Society.
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Driscoll, Daniel G.; Zogorski, John S.
1990-01-01
The report presents a summary of basin characteristics affecting streamflow, a history of the U.S. Geological Survey 's stream-gaging program, and a compilation of discharge records and statistical summaries for selected sites within the Rapid Creek basin. It is the first in a series which will investigate surface-water/groundwater relations along Rapid Creek. The summary of basin characteristics includes descriptions of the geology and hydrogeology, physiography and climate, land use and vegetation, reservoirs, and water use within the basin. A recounting of the U.S. Geological Survey 's stream-gaging program and a tabulation of historic stream-gaging stations within the basin are furnished. A compilation of monthly and annual mean discharge values for nine currently operated, long-term, continuous-record, streamflow-gaging stations on Rapid Creek is presented. The statistical summary for each site includes summary statistics on monthly and annual mean values, correlation matrix for monthly values, serial correlation for 1 year lag for monthly values, percentile rankings for monthly and annual mean values, low and high value tables, duration curves, and peak-discharge tables. Records of monthend contents for two reservoirs within the basin also are presented. (USGS)
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Perception of ensemble statistics requires attention.
Jackson-Nielsen, Molly; Cohen, Michael A; Pitts, Michael A
2017-02-01
To overcome inherent limitations in perceptual bandwidth, many aspects of the visual world are represented as summary statistics (e.g., average size, orientation, or density of objects). Here, we investigated the relationship between summary (ensemble) statistics and visual attention. Recently, it was claimed that one ensemble statistic in particular, color diversity, can be perceived without focal attention. However, a broader debate exists over the attentional requirements of conscious perception, and it is possible that some form of attention is necessary for ensemble perception. To test this idea, we employed a modified inattentional blindness paradigm and found that multiple types of summary statistics (color and size) often go unnoticed without attention. In addition, we found attentional costs in dual-task situations, further implicating a role for attention in statistical perception. Overall, we conclude that while visual ensembles may be processed efficiently, some amount of attention is necessary for conscious perception of ensemble statistics. Copyright © 2016 Elsevier Inc. All rights reserved.
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1998 statistical summaries : Federal Transit Administration : grant assistance programs
DOT National Transportation Integrated Search
1999-03-01
The 1998 Statistical Summaries provides information about the Federal Transit Administration's (FTA) major financial aid programs for Federal Fiscal Year (FY) 1998. The report covers the following programs: Urbanized Area Formula, Non-urbanized Area ...
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Kakourou, Alexia; Vach, Werner; Nicolardi, Simone; van der Burgt, Yuri; Mertens, Bart
2016-10-01
Mass spectrometry based clinical proteomics has emerged as a powerful tool for high-throughput protein profiling and biomarker discovery. Recent improvements in mass spectrometry technology have boosted the potential of proteomic studies in biomedical research. However, the complexity of the proteomic expression introduces new statistical challenges in summarizing and analyzing the acquired data. Statistical methods for optimally processing proteomic data are currently a growing field of research. In this paper we present simple, yet appropriate methods to preprocess, summarize and analyze high-throughput MALDI-FTICR mass spectrometry data, collected in a case-control fashion, while dealing with the statistical challenges that accompany such data. The known statistical properties of the isotopic distribution of the peptide molecules are used to preprocess the spectra and translate the proteomic expression into a condensed data set. Information on either the intensity level or the shape of the identified isotopic clusters is used to derive summary measures on which diagnostic rules for disease status allocation will be based. Results indicate that both the shape of the identified isotopic clusters and the overall intensity level carry information on the class outcome and can be used to predict the presence or absence of the disease.
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NASA Technical Reports Server (NTRS)
Xu, Kuan-Man
2006-01-01
A new method is proposed to compare statistical differences between summary histograms, which are the histograms summed over a large ensemble of individual histograms. It consists of choosing a distance statistic for measuring the difference between summary histograms and using a bootstrap procedure to calculate the statistical significance level. Bootstrapping is an approach to statistical inference that makes few assumptions about the underlying probability distribution that describes the data. Three distance statistics are compared in this study. They are the Euclidean distance, the Jeffries-Matusita distance and the Kuiper distance. The data used in testing the bootstrap method are satellite measurements of cloud systems called cloud objects. Each cloud object is defined as a contiguous region/patch composed of individual footprints or fields of view. A histogram of measured values over footprints is generated for each parameter of each cloud object and then summary histograms are accumulated over all individual histograms in a given cloud-object size category. The results of statistical hypothesis tests using all three distances as test statistics are generally similar, indicating the validity of the proposed method. The Euclidean distance is determined to be most suitable after comparing the statistical tests of several parameters with distinct probability distributions among three cloud-object size categories. Impacts on the statistical significance levels resulting from differences in the total lengths of satellite footprint data between two size categories are also discussed.
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Fundamentals of Physics, Part 2 (Chapters 12-20)
NASA Astrophysics Data System (ADS)
Halliday, David; Resnick, Robert; Walker, Jearl
2003-12-01
Chapter 12 Equilibrium and Elasticity. What injury can occur to a rock climber hanging by a crimp hold? 12-1 What Is Physics? 12-2 Equilibrium. 12-3 The Requirements of Equilibrium. 12-4 The Center of Gravity. 12-5 Some Examples of Static Equilibrium. 12-6 Indeterminate Structures. 12-7 Elasticity. Review & Summary Questions Problems. Chapter 13 Gravitation. What lies at the center of our Milky Way galaxy? 13-1 What Is Physics? 13-2 Newton's Law of Gravitation. 13-3 Gravitation and the Principle of Superposition. 13-4 Gravitation Near Earth's Surface. 13-5 Gravitation Inside Earth. 13-6 Gravitational Potential Energy. 13-7 Planets and Satellites: Kepler's Laws. 13-8 Satellites: Orbits and Energy. 13-9 Einstein and Gravitation. Review & Summary Questions Problems. Chapter 14 Fluids. What causes ground effect in race car driving? 14-1 What Is Physics? 14-2 What Is a Fluid? 14-3 Density and Pressure. 14-4 Fluids at Rest. 14-5 Measuring Pressure. 14-6 Pascal's Principle. 14-7 Archimedes' Principle. 14-8 Ideal Fluids in Motion. 14-9 The Equation of Continuity. 14-10 Bernoulli's Equation. Review & SummaryQuestionsProblems. Chapter 15 Oscillations. What is the "secret" of a skilled diver's high catapult in springboard diving? 15-1 What Is Physics? 15-2 Simple Harmonic Motion. 15-3 The Force Law for Simple Harmonic Motion. 15-4 Energy in Simple Harmonic Motion. 15-5 An Angular Simple Harmonic Oscillator. 15-6 Pendulums. 15-7 Simple Harmonic Motion and Uniform Circular Motion. 15-8 Damped Simple Harmonic Motion. 15-9 Forced Oscillations and Resonance. Review & Summary Questions Problems. Chapter 16 Waves--I. How can a submarine wreck be located by distant seismic stations? 16-1 What Is Physics? 16-2 Types of Waves. 16-3 Transverse and Longitudinal Waves. 16-4 Wavelength and Frequency. 16-5 The Speed of a Traveling Wave. 16-6 Wave Speed on a Stretched String. 16-7 Energy and Power of a Wave Traveling Along a String. 16-8 The Wave Equation. 16-9 The Principle of Superposition for Waves. 16-10 Interference of Waves. 16-11 Phasors. 16-12 Standing Waves. 16-13 Standing Waves and Resonance. Review & Summary Questions Problems. Chapter 17 Waves--II. How can an emperor penguin .nd its mate among thousands of huddled penguins? 17-1 What Is Physics? 17-2 Sound Waves. 17-3 The Speed of Sound. 17-4 Traveling Sound Waves. 17-5 Interference. 17-6 Intensity and Sound Level. 17-7 Sources of Musical Sound. 17-8 Beats. 17-9 The Doppler Effect. 17-10 Supersonic Speeds, Shock Waves. Review & Summary Questions Problems. Chapter 18 Temperature, Heat, and the First Law of Thermodynamics. How can a dead rattlesnake detect and strike a reaching hand? 18-1 What Is Physics?. 18-2 Temperature. 18-3 The Zeroth Law of Thermodynamics. 18-4 Measuring Temperature. 18-5 The Celsius and Fahrenheit Scales. 18-6 Thermal Expansion. 18-7 Temperature and Heat. 18-8 The Absorption of Heat by Solids and Liquids. 18-9 A Closer Look at Heat and Work. 18-10 The First Law of Thermodynamics. 18-11 Some Special Cases of the First Law of Thermodynamics. 18-12 Heat Transfer Mechanisms. Review & Summary Questions Problems. Chapter 19 The Kinetic Theory of Gases. How can cooling steam inside a railroad tank car cause the car to be crushed? 19-1 What Is Physics? 19-2 Avogadro's Number. 19-3 Ideal Gases. 19-4 Pressure, Temperature, and RMS Speed. 19-5 Translational Kinetic Energy. 19-6 Mean Free Path. 19-7 The Distribution of Molecular Speeds. 19-8 The Molar Speci.c Heats of an Ideal Gas. 19-9 Degrees of Freedom and Molar Speci.c Heats. 19-10 A Hint of Quantum Theory. 19-11 The Adiabatic Expansion of an Ideal Gas. Review & Summary Questions Problems. Chapter 20 Entropy and the Second Law of Thermodynamics. Why is the popping of popcorn irreversible? 20-1 What Is Physics? 20-2 Irreversible Processes and Entropy. 20-3 Change in Entropy. 20-4 The Second Law of Thermodynamics. 20-5 Entropy in the Real World: Engines. 20-6 Entropy in the Real World: Refrigerators. 20-7 The Ef.ciencies of Real Engines. 20-8 A Statistical View of Entropy. Review & Summary Questions Problems. Appendices. A The International System of Units (SI). B Some Fundamental Constants of Physics. C Some Astronomical Data. D Conversion Factors. E Mathematical Formulas. F Properties of the Elements. G Periodic Table of the Elements. Answers to Checkpoints and Odd-Numbered Questions and Problems. Index.
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Hanford Works monthly report, December 1952
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1953-01-23
This document presents a summary of work and progress at the Hanford Engineer Works for December 1952. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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2016-06-01
14 Table 2. Summary of Statistics from GGSS Data ........................................ 35 Table 3. Summary of Statistics from...similar approach are unsurprisingly quite consistent in outcomes within statistical variance. The model is used to estimate the effects of exogenous...of German residents (~82 million), excluding diplomats, foreign military and homeless persons. (German Federal Office of Statistics , 2013, p. 475
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Facts about Newspapers '87: A Statistical Summary of the Newspaper Business.
ERIC Educational Resources Information Center
American Newspaper Publishers Association, Washington, DC.
Attesting to the continuing economic strength and institutional vitality of the newspaper business in 1987, this booklet presents a statistical summary of the industry in the United States and Canada. The statistics cover a wide range of topics, including (1) number of daily newspapers; (2) daily newspaper circulation; (3) single copy sales price;…
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2016 Service Academy Gender Relations Survey: Overview Report
2017-02-01
environment within the Academies. This Executive Summary will provide a summary of the methodology used and the top line results from the survey.1 Summary...discussion of the measurement constructs, a description of the survey methodology , and detailed presentation of the results. Each report section...are determined statistically significant at an alpha (α) level of .05.6 Survey Methodology Statistical Design OPA conducts cross-Service surveys that
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Suurmond, Robert; van Rhee, Henk; Hak, Tony
2017-12-01
We present a new tool for meta-analysis, Meta-Essentials, which is free of charge and easy to use. In this paper, we introduce the tool and compare its features to other tools for meta-analysis. We also provide detailed information on the validation of the tool. Although free of charge and simple, Meta-Essentials automatically calculates effect sizes from a wide range of statistics and can be used for a wide range of meta-analysis applications, including subgroup analysis, moderator analysis, and publication bias analyses. The confidence interval of the overall effect is automatically based on the Knapp-Hartung adjustment of the DerSimonian-Laird estimator. However, more advanced meta-analysis methods such as meta-analytical structural equation modelling and meta-regression with multiple covariates are not available. In summary, Meta-Essentials may prove a valuable resource for meta-analysts, including researchers, teachers, and students. © 2017 The Authors. Research Synthesis Methods published by John Wiley & Sons Ltd.
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Efficient summary statistical representation when change localization fails.
Haberman, Jason; Whitney, David
2011-10-01
People are sensitive to the summary statistics of the visual world (e.g., average orientation/speed/facial expression). We readily derive this information from complex scenes, often without explicit awareness. Given the fundamental and ubiquitous nature of summary statistical representation, we tested whether this kind of information is subject to the attentional constraints imposed by change blindness. We show that information regarding the summary statistics of a scene is available despite limited conscious access. In a novel experiment, we found that while observers can suffer from change blindness (i.e., not localize where change occurred between two views of the same scene), observers could nevertheless accurately report changes in the summary statistics (or "gist") about the very same scene. In the experiment, observers saw two successively presented sets of 16 faces that varied in expression. Four of the faces in the first set changed from one emotional extreme (e.g., happy) to another (e.g., sad) in the second set. Observers performed poorly when asked to locate any of the faces that changed (change blindness). However, when asked about the ensemble (which set was happier, on average), observer performance remained high. Observers were sensitive to the average expression even when they failed to localize any specific object change. That is, even when observers could not locate the very faces driving the change in average expression between the two sets, they nonetheless derived a precise ensemble representation. Thus, the visual system may be optimized to process summary statistics in an efficient manner, allowing it to operate despite minimal conscious access to the information presented.
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An Adaptive Association Test for Multiple Phenotypes with GWAS Summary Statistics.
Kim, Junghi; Bai, Yun; Pan, Wei
2015-12-01
We study the problem of testing for single marker-multiple phenotype associations based on genome-wide association study (GWAS) summary statistics without access to individual-level genotype and phenotype data. For most published GWASs, because obtaining summary data is substantially easier than accessing individual-level phenotype and genotype data, while often multiple correlated traits have been collected, the problem studied here has become increasingly important. We propose a powerful adaptive test and compare its performance with some existing tests. We illustrate its applications to analyses of a meta-analyzed GWAS dataset with three blood lipid traits and another with sex-stratified anthropometric traits, and further demonstrate its potential power gain over some existing methods through realistic simulation studies. We start from the situation with only one set of (possibly meta-analyzed) genome-wide summary statistics, then extend the method to meta-analysis of multiple sets of genome-wide summary statistics, each from one GWAS. We expect the proposed test to be useful in practice as more powerful than or complementary to existing methods. © 2015 WILEY PERIODICALS, INC.
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Statistical summaries of selected Iowa streamflow data through September 2013.
DOT National Transportation Integrated Search
2015-01-01
Statistical summaries of streamflow data collected at : 184 streamgages in Iowa are presented in this report. All : streamgages included for analysis have at least 10 years of : continuous record collected before or through September : 2013. This rep...
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Hanford Atomic Products Operation monthly report, January 1955
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1955-02-21
This document presents a summary of work and progress at the Hanford Engineer Works for January 1955. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical Design, and Project Sections. Costs for the various departments are presented in the Financial department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report for April 1955
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1955-05-23
This document presents a summary of work and progress at the Hanford Engineer Works for April 1955. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Monthly report Hanford Atomic Products Operation, July 1954
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1954-08-20
This document presents a summary of work and progress at the Hanford Engineer Works for July 1954. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services Departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, August 1956
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1956-09-28
This document presents a summary of work and progress at the Hanford Engineer Works for August 1956. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Sciences, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report for May 1956
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1956-06-21
This document presents a summary of work and progress at the Hanford Engineer Works for May, 1956. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, September 1955
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1955-10-27
This document presents a summary of work and progress at the Hanford Engineer Works for September 1955. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, March 1955
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1955-04-20
This document presents a summary of work and progress at the Hanford Engineer Works for March 1955. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, November 1955
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1955-12-30
This document presents a summary of work and progress at the Hanford Engineer Works for November 1955. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, August 1955
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1955-09-27
This document presents a summary of work and progress at the Hanford Engineer Works for August 1955. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Sciences, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report for December 1955
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1956-01-30
This document presents a summary of work and progress at the Hanford Engineer Works for December 1955. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, October 1955
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1955-11-30
This document presents a summary of work and progress at the Hanford Engineer works for October, 1955. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products for Operation monthly report, February 1955
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1955-03-18
This document presents a summary of work and progress at the Hanford Engineer Works for February 1955. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, May 1955
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1955-06-23
This document presents a summary of work and progress at the Hanford Engineer Works for May 1955. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, July 1955
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1955-08-26
This document presents a summary of work and progress at the Hanford Engineer Works for July 1955. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, October 1954
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1954-11-24
This document presents a summary of work and progress at the Hanford Engineer Works for October 1954. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, December 1954
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1955-01-25
This document presents a summary of work and progress at the Hanford Engineer Works for December 1954. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, August 1954
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1954-09-17
This document presents a summary of work and progress at the Hanford Engineer Works for August 1954. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department report plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities, and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Hanford Atomic Products Operation monthly report, August 1953
DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1953-09-18
This document presents a summary of work and progress at the Hanford Engineer Works for August, 1953. The report is divided into sections by department. A plant wide general summary is included at the beginning of the report, after which the departmental summaries begin. The Manufacturing Department reports plant statistics, and summaries for the Metal Preparation, Reactor and Separation sections. The Engineering Department`s section summarizes work for the Technical, Design, and Project Sections. Costs for the various departments are presented in the Financial Department`s summary. The Medical, Radiological Sciences, Utilities and General Services, Employee and Public Relations, and Community Realmore » Estate and Services departments have sections presenting their monthly statistics, work, progress, and summaries.« less
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Statistical summary of commercial jet aircraft accidents : worldwide operations, 1959-2009
DOT National Transportation Integrated Search
2010-07-01
The accident statistics presented in this summary are confined to worldwide commercial jet airplanes that are heavier than 60,000 pounds maximum gross weight. Within that set of airplanes, there are two groups excluded: : 1) Airplanes manufactured in...
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1997 Iowa crash summary : a summary of motor vehicle crash statistics on Iowa roadways
DOT National Transportation Integrated Search
1997-01-01
All information concerning Iowa : traffic crashes was taken from report forms provided by investigating officers and drivers involved in : crashes. : All statistics are gathered and calculated by the Iowa Department of Transportations Office of Dr...
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1996 Iowa crash summary : a summary of motor vehicle crash statistics on Iowa roadways
DOT National Transportation Integrated Search
1996-01-01
All information concerning Iowa : traffic crashes was taken from report forms provided by investigating officers and drivers involved in : crashes. : All statistics are gathered and calculated by the Iowa Department of Transportations Office of Dr...
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1998 Iowa crash summary : a summary of motor vehicle crash statistics on Iowa roadways
DOT National Transportation Integrated Search
1998-01-01
All information concerning Iowa : traffic crashes was taken from report forms provided by investigating officers and drivers involved in : crashes. : All statistics are gathered and calculated by the Iowa Department of Transportations Office of Dr...
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Dissecting the genetics of complex traits using summary association statistics.
Pasaniuc, Bogdan; Price, Alkes L
2017-02-01
During the past decade, genome-wide association studies (GWAS) have been used to successfully identify tens of thousands of genetic variants associated with complex traits and diseases. These studies have produced extensive repositories of genetic variation and trait measurements across large numbers of individuals, providing tremendous opportunities for further analyses. However, privacy concerns and other logistical considerations often limit access to individual-level genetic data, motivating the development of methods that analyse summary association statistics. Here, we review recent progress on statistical methods that leverage summary association data to gain insights into the genetic basis of complex traits and diseases.
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Dissecting the genetics of complex traits using summary association statistics
Pasaniuc, Bogdan; Price, Alkes L.
2017-01-01
During the past decade, genome-wide association studies (GWAS) have successfully identified tens of thousands of genetic variants associated with complex traits and diseases. These studies have produced extensive repositories of genetic variation and trait measurements across large numbers of individuals, providing tremendous opportunities for further analyses. However, privacy concerns and other logistical considerations often limit access to individual-level genetic data, motivating the development of methods that analyze summary association statistics. Here we review recent progress on statistical methods that leverage summary association data to gain insights into the genetic basis of complex traits and diseases. PMID:27840428
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Lee, L.; Helsel, D.
2005-01-01
Trace contaminants in water, including metals and organics, often are measured at sufficiently low concentrations to be reported only as values below the instrument detection limit. Interpretation of these "less thans" is complicated when multiple detection limits occur. Statistical methods for multiply censored, or multiple-detection limit, datasets have been developed for medical and industrial statistics, and can be employed to estimate summary statistics or model the distributions of trace-level environmental data. We describe S-language-based software tools that perform robust linear regression on order statistics (ROS). The ROS method has been evaluated as one of the most reliable procedures for developing summary statistics of multiply censored data. It is applicable to any dataset that has 0 to 80% of its values censored. These tools are a part of a software library, or add-on package, for the R environment for statistical computing. This library can be used to generate ROS models and associated summary statistics, plot modeled distributions, and predict exceedance probabilities of water-quality standards. ?? 2005 Elsevier Ltd. All rights reserved.
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Multi-trait analysis of genome-wide association summary statistics using MTAG.
Turley, Patrick; Walters, Raymond K; Maghzian, Omeed; Okbay, Aysu; Lee, James J; Fontana, Mark Alan; Nguyen-Viet, Tuan Anh; Wedow, Robbee; Zacher, Meghan; Furlotte, Nicholas A; Magnusson, Patrik; Oskarsson, Sven; Johannesson, Magnus; Visscher, Peter M; Laibson, David; Cesarini, David; Neale, Benjamin M; Benjamin, Daniel J
2018-02-01
We introduce multi-trait analysis of GWAS (MTAG), a method for joint analysis of summary statistics from genome-wide association studies (GWAS) of different traits, possibly from overlapping samples. We apply MTAG to summary statistics for depressive symptoms (N eff = 354,862), neuroticism (N = 168,105), and subjective well-being (N = 388,538). As compared to the 32, 9, and 13 genome-wide significant loci identified in the single-trait GWAS (most of which are themselves novel), MTAG increases the number of associated loci to 64, 37, and 49, respectively. Moreover, association statistics from MTAG yield more informative bioinformatics analyses and increase the variance explained by polygenic scores by approximately 25%, matching theoretical expectations.
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1992-10-01
N=8) and Results of 44 Statistical Analyses for Impact Test Performed on Forefoot of Unworn Footwear A-2. Summary Statistics (N=8) and Results of...on Forefoot of Worn Footwear Vlll Tables (continued) Table Page B-2. Summary Statistics (N=4) and Results of 76 Statistical Analyses for Impact...used tests to assess heel and forefoot shock absorption, upper and sole durability, and flexibility (Cavanagh, 1978). Later, the number of tests was
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U.S. Marine Corps Study of Establishing Time Criteria for Logistics Tasks
2004-09-30
STATISTICS FOR REQUESTS PER DAY FOR TWO BATTALIONS II-25 II-6 SUMMARY STATISTICS IN HOURS FOR RESOURCE REQUIREMENTS PER DAY FOR TWO BATTALIONS II-26 II-7...SUMMARY STATISTICS FOR INDIVIDUALS FOR RESOURCE REQUIREMENTS PER DAY FOR TWO BATTALIONS II-27 Study of Establishing Time Criteria for Logistics...developed and run to provide statistical information for analysis. In Task Four, the study team used Task Three findings to determine data requirements
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NASA Astrophysics Data System (ADS)
Allen, J. Icarus; Holt, Jason T.; Blackford, Jerry; Proctor, Roger
2007-12-01
Marine systems models are becoming increasingly complex and sophisticated, but far too little attention has been paid to model errors and the extent to which model outputs actually relate to ecosystem processes. Here we describe the application of summary error statistics to a complex 3D model (POLCOMS-ERSEM) run for the period 1988-1989 in the southern North Sea utilising information from the North Sea Project, which collected a wealth of observational data. We demonstrate that to understand model data misfit and the mechanisms creating errors, we need to use a hierarchy of techniques, including simple correlations, model bias, model efficiency, binary discriminator analysis and the distribution of model errors to assess model errors spatially and temporally. We also demonstrate that a linear cost function is an inappropriate measure of misfit. This analysis indicates that the model has some skill for all variables analysed. A summary plot of model performance indicates that model performance deteriorates as we move through the ecosystem from the physics, to the nutrients and plankton.
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Dai, Mingwei; Ming, Jingsi; Cai, Mingxuan; Liu, Jin; Yang, Can; Wan, Xiang; Xu, Zongben
2017-09-15
Results from genome-wide association studies (GWAS) suggest that a complex phenotype is often affected by many variants with small effects, known as 'polygenicity'. Tens of thousands of samples are often required to ensure statistical power of identifying these variants with small effects. However, it is often the case that a research group can only get approval for the access to individual-level genotype data with a limited sample size (e.g. a few hundreds or thousands). Meanwhile, summary statistics generated using single-variant-based analysis are becoming publicly available. The sample sizes associated with the summary statistics datasets are usually quite large. How to make the most efficient use of existing abundant data resources largely remains an open question. In this study, we propose a statistical approach, IGESS, to increasing statistical power of identifying risk variants and improving accuracy of risk prediction by i ntegrating individual level ge notype data and s ummary s tatistics. An efficient algorithm based on variational inference is developed to handle the genome-wide analysis. Through comprehensive simulation studies, we demonstrated the advantages of IGESS over the methods which take either individual-level data or summary statistics data as input. We applied IGESS to perform integrative analysis of Crohns Disease from WTCCC and summary statistics from other studies. IGESS was able to significantly increase the statistical power of identifying risk variants and improve the risk prediction accuracy from 63.2% ( ±0.4% ) to 69.4% ( ±0.1% ) using about 240 000 variants. The IGESS software is available at https://github.com/daviddaigithub/IGESS . zbxu@xjtu.edu.cn or xwan@comp.hkbu.edu.hk or eeyang@hkbu.edu.hk. Supplementary data are available at Bioinformatics online. © The Author (2017). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com
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When Less Is More: Meaningful Learning from Visual and Verbal Summaries of Science Textbook Lessons.
ERIC Educational Resources Information Center
Mayer, Richard E.; And Others
1996-01-01
In 3 experiments, 163 college students who read a summary with a sequence of short captions with simple illustrations depicting steps in a process recalled the steps and solved transfer problems as well as or better than students who received the full text with a summary or alone. (SLD)
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Airport noise summary, 2000-2002
DOT National Transportation Integrated Search
2002-01-01
This 20002002 edition of the NBAA Airport Noise Summary : shows those airports with noise advisories or rules. These restrictions : range from a simple avoid overflight of school 2 NM south of 09 : approach to a specific decibel level requir...
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Summary Statistics, Educational Achievement Gaps and the Ecological Fallacy
ERIC Educational Resources Information Center
Connolly, Paul
2006-01-01
Summary statistics continue to play an important role in identifying and monitoring patterns and trends in educational inequalities between differing groups of pupils over time. However, this article argues that their uncritical use can also encourage the labelling of whole groups of pupils as "underachievers" or…
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One of the main uses of biomarker measurements is to compare different populations to each other and to assess risk in comparison to established parameters. This is most often done using summary statistics such as central tendency, variance components, confidence intervals, excee...
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Fully Bayesian tests of neutrality using genealogical summary statistics.
Drummond, Alexei J; Suchard, Marc A
2008-10-31
Many data summary statistics have been developed to detect departures from neutral expectations of evolutionary models. However questions about the neutrality of the evolution of genetic loci within natural populations remain difficult to assess. One critical cause of this difficulty is that most methods for testing neutrality make simplifying assumptions simultaneously about the mutational model and the population size model. Consequentially, rejecting the null hypothesis of neutrality under these methods could result from violations of either or both assumptions, making interpretation troublesome. Here we harness posterior predictive simulation to exploit summary statistics of both the data and model parameters to test the goodness-of-fit of standard models of evolution. We apply the method to test the selective neutrality of molecular evolution in non-recombining gene genealogies and we demonstrate the utility of our method on four real data sets, identifying significant departures of neutrality in human influenza A virus, even after controlling for variation in population size. Importantly, by employing a full model-based Bayesian analysis, our method separates the effects of demography from the effects of selection. The method also allows multiple summary statistics to be used in concert, thus potentially increasing sensitivity. Furthermore, our method remains useful in situations where analytical expectations and variances of summary statistics are not available. This aspect has great potential for the analysis of temporally spaced data, an expanding area previously ignored for limited availability of theory and methods.
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Adapt-Mix: learning local genetic correlation structure improves summary statistics-based analyses
Park, Danny S.; Brown, Brielin; Eng, Celeste; Huntsman, Scott; Hu, Donglei; Torgerson, Dara G.; Burchard, Esteban G.; Zaitlen, Noah
2015-01-01
Motivation: Approaches to identifying new risk loci, training risk prediction models, imputing untyped variants and fine-mapping causal variants from summary statistics of genome-wide association studies are playing an increasingly important role in the human genetics community. Current summary statistics-based methods rely on global ‘best guess’ reference panels to model the genetic correlation structure of the dataset being studied. This approach, especially in admixed populations, has the potential to produce misleading results, ignores variation in local structure and is not feasible when appropriate reference panels are missing or small. Here, we develop a method, Adapt-Mix, that combines information across all available reference panels to produce estimates of local genetic correlation structure for summary statistics-based methods in arbitrary populations. Results: We applied Adapt-Mix to estimate the genetic correlation structure of both admixed and non-admixed individuals using simulated and real data. We evaluated our method by measuring the performance of two summary statistics-based methods: imputation and joint-testing. When using our method as opposed to the current standard of ‘best guess’ reference panels, we observed a 28% decrease in mean-squared error for imputation and a 73.7% decrease in mean-squared error for joint-testing. Availability and implementation: Our method is publicly available in a software package called ADAPT-Mix available at https://github.com/dpark27/adapt_mix. Contact: noah.zaitlen@ucsf.edu PMID:26072481
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Bevans, Hugh E.; Diaz, Arthur M.
1980-01-01
Summaries of descriptive statistics are compiled for 14 data-collection sites located on streams draining areas that have been shaft mined and strip mined for coal in Cherokee and Crawford Counties in southeastern Kansas. These summaries include water-quality data collected from October 1976 through April 1979. Regression equations relating specific conductance and instantaneous streamflow to concentrations of bicarbonate, sulfate, chloride, fluoride, calcium, magnesium, sodium, potassium, silica, and dissolved solids are presented.
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Statistical Summary of Missouri Higher Education, 1999-2000.
ERIC Educational Resources Information Center
Missouri State Coordinating Board for Higher Education, Jefferson City.
This report provides a statistical summary of higher education in Missouri for the 1999-2000 academic year. More than 74 tables provide data on: advanced placement enrollment in secondary schools, American College Testing program scores by institutional sector, high school rankings by institutional sector, the Missouri Coordinating Board for…
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This statistical summary reports data from the Environmental Monitoring and Assessment Program (EMAP) Western Pilot (EMAP-W). EMAP-W was a sample survey (or probability survey, often simply called 'random') of streams and rivers in 12 states of the western U.S. (Arizona, Californ...
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Analysis of Variance with Summary Statistics in Microsoft® Excel®
ERIC Educational Resources Information Center
Larson, David A.; Hsu, Ko-Cheng
2010-01-01
Students regularly are asked to solve Single Factor Analysis of Variance problems given only the sample summary statistics (number of observations per category, category means, and corresponding category standard deviations). Most undergraduate students today use Excel for data analysis of this type. However, Excel, like all other statistical…
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Summary travel characteristics : Hawaii
DOT National Transportation Integrated Search
1997-10-01
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Massachusetts
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : New Jersey
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : New Hampshire
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : New York
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : New Mexico
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : South Dakota
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Virgina
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : South Carolina
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Florida
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Kansas
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : California
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Texas
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : North Carolina
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Illinois
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Montana
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Kentucky
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Wisconsin
DOT National Transportation Integrated Search
1997-10-01
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Maryland
DOT National Transportation Integrated Search
1997-09-19
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Nevada
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Iowa
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Washington
DOT National Transportation Integrated Search
1997-10-01
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Alabama
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Nebraska
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Oregon
DOT National Transportation Integrated Search
1997-10-01
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Maine
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Utah
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Michigan
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Missouri
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Colorado
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Alaska
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Oklahoma
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Indiana
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Idaho
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Tennessee
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : West Virginia
DOT National Transportation Integrated Search
1997-10-01
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Georgia
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Delaware
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Ohio
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Arizona
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : North Dakota
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Wyoming
DOT National Transportation Integrated Search
1997-01-01
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Minnesota
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Vermont
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Louisiana
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Mississippi
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Connecticut
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Rhode Island
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Pennsylvania
DOT National Transportation Integrated Search
1997-09-30
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Summary travel characteristics : Arkansas
DOT National Transportation Integrated Search
1997-09-29
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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The capacity limitations of orientation summary statistics
Attarha, Mouna; Moore, Cathleen M.
2015-01-01
The simultaneous–sequential method was used to test the processing capacity of establishing mean orientation summaries. Four clusters of oriented Gabor patches were presented in the peripheral visual field. One of the clusters had a mean orientation that was tilted either left or right while the mean orientations of the other three clusters were roughly vertical. All four clusters were presented at the same time in the simultaneous condition whereas the clusters appeared in temporal subsets of two in the sequential condition. Performance was lower when the means of all four clusters had to be processed concurrently than when only two had to be processed in the same amount of time. The advantage for establishing fewer summaries at a given time indicates that the processing of mean orientation engages limited-capacity processes (Experiment 1). This limitation cannot be attributed to crowding, low target-distractor discriminability, or a limited-capacity comparison process (Experiments 2 and 3). In contrast to the limitations of establishing multiple summary representations, establishing a single summary representation unfolds without interference (Experiment 4). When interpreted in the context of recent work on the capacity of summary statistics, these findings encourage reevaluation of the view that early visual perception consists of summary statistic representations that unfold independently across multiple areas of the visual field. PMID:25810160
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NWS Weather Fatality, Injury and Damage Statistics
government web resources and services. Natural Hazard Statistics Statistics U.S. Summaries Online The U.S. Natural Hazard Statistics provide statistical information on fatalities, injuries and
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A novel approach for choosing summary statistics in approximate Bayesian computation.
Aeschbacher, Simon; Beaumont, Mark A; Futschik, Andreas
2012-11-01
The choice of summary statistics is a crucial step in approximate Bayesian computation (ABC). Since statistics are often not sufficient, this choice involves a trade-off between loss of information and reduction of dimensionality. The latter may increase the efficiency of ABC. Here, we propose an approach for choosing summary statistics based on boosting, a technique from the machine-learning literature. We consider different types of boosting and compare them to partial least-squares regression as an alternative. To mitigate the lack of sufficiency, we also propose an approach for choosing summary statistics locally, in the putative neighborhood of the true parameter value. We study a demographic model motivated by the reintroduction of Alpine ibex (Capra ibex) into the Swiss Alps. The parameters of interest are the mean and standard deviation across microsatellites of the scaled ancestral mutation rate (θ(anc) = 4N(e)u) and the proportion of males obtaining access to matings per breeding season (ω). By simulation, we assess the properties of the posterior distribution obtained with the various methods. According to our criteria, ABC with summary statistics chosen locally via boosting with the L(2)-loss performs best. Applying that method to the ibex data, we estimate θ(anc)≈ 1.288 and find that most of the variation across loci of the ancestral mutation rate u is between 7.7 × 10(-4) and 3.5 × 10(-3) per locus per generation. The proportion of males with access to matings is estimated as ω≈ 0.21, which is in good agreement with recent independent estimates.
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NASA Astrophysics Data System (ADS)
Erfanifard, Y.; Rezayan, F.
2014-10-01
Vegetation heterogeneity biases second-order summary statistics, e.g., Ripley's K-function, applied for spatial pattern analysis in ecology. Second-order investigation based on Ripley's K-function and related statistics (i.e., L- and pair correlation function g) is widely used in ecology to develop hypothesis on underlying processes by characterizing spatial patterns of vegetation. The aim of this study was to demonstrate effects of underlying heterogeneity of wild pistachio (Pistacia atlantica Desf.) trees on the second-order summary statistics of point pattern analysis in a part of Zagros woodlands, Iran. The spatial distribution of 431 wild pistachio trees was accurately mapped in a 40 ha stand in the Wild Pistachio & Almond Research Site, Fars province, Iran. Three commonly used second-order summary statistics (i.e., K-, L-, and g-functions) were applied to analyse their spatial pattern. The two-sample Kolmogorov-Smirnov goodness-of-fit test showed that the observed pattern significantly followed an inhomogeneous Poisson process null model in the study region. The results also showed that heterogeneous pattern of wild pistachio trees biased the homogeneous form of K-, L-, and g-functions, demonstrating a stronger aggregation of the trees at the scales of 0-50 m than actually existed and an aggregation at scales of 150-200 m, while regularly distributed. Consequently, we showed that heterogeneity of point patterns may bias the results of homogeneous second-order summary statistics and we also suggested applying inhomogeneous summary statistics with related null models for spatial pattern analysis of heterogeneous vegetations.
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A Novel Approach for Choosing Summary Statistics in Approximate Bayesian Computation
Aeschbacher, Simon; Beaumont, Mark A.; Futschik, Andreas
2012-01-01
The choice of summary statistics is a crucial step in approximate Bayesian computation (ABC). Since statistics are often not sufficient, this choice involves a trade-off between loss of information and reduction of dimensionality. The latter may increase the efficiency of ABC. Here, we propose an approach for choosing summary statistics based on boosting, a technique from the machine-learning literature. We consider different types of boosting and compare them to partial least-squares regression as an alternative. To mitigate the lack of sufficiency, we also propose an approach for choosing summary statistics locally, in the putative neighborhood of the true parameter value. We study a demographic model motivated by the reintroduction of Alpine ibex (Capra ibex) into the Swiss Alps. The parameters of interest are the mean and standard deviation across microsatellites of the scaled ancestral mutation rate (θanc = 4Neu) and the proportion of males obtaining access to matings per breeding season (ω). By simulation, we assess the properties of the posterior distribution obtained with the various methods. According to our criteria, ABC with summary statistics chosen locally via boosting with the L2-loss performs best. Applying that method to the ibex data, we estimate θ^anc≈1.288 and find that most of the variation across loci of the ancestral mutation rate u is between 7.7 × 10−4 and 3.5 × 10−3 per locus per generation. The proportion of males with access to matings is estimated as ω^≈0.21, which is in good agreement with recent independent estimates. PMID:22960215
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1994 summary : public transportation systems in Washington state
DOT National Transportation Integrated Search
1995-08-01
The Washington State Department of Transportation (WSDOT) prepares the annual : transit statistical summary. The intent for this summary is to provide uniform : data to transit providers, the Legislative Transportation Committee, and local : and regi...
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Summary travel characteristics : District of Columbia
DOT National Transportation Integrated Search
1997-10-01
The Summary Travel Characteristics publication series contains summary tables of travel statistics for census regions and divisions, States, and metropolitan areas. The tables in this report provide an overview of the findings of the American Travel ...
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Bayesian modelling of lung function data from multiple-breath washout tests.
Mahar, Robert K; Carlin, John B; Ranganathan, Sarath; Ponsonby, Anne-Louise; Vuillermin, Peter; Vukcevic, Damjan
2018-05-30
Paediatric respiratory researchers have widely adopted the multiple-breath washout (MBW) test because it allows assessment of lung function in unsedated infants and is well suited to longitudinal studies of lung development and disease. However, a substantial proportion of MBW tests in infants fail current acceptability criteria. We hypothesised that a model-based approach to analysing the data, in place of traditional simple empirical summaries, would enable more efficient use of these tests. We therefore developed a novel statistical model for infant MBW data and applied it to 1197 tests from 432 individuals from a large birth cohort study. We focus on Bayesian estimation of the lung clearance index, the most commonly used summary of lung function from MBW tests. Our results show that the model provides an excellent fit to the data and shed further light on statistical properties of the standard empirical approach. Furthermore, the modelling approach enables the lung clearance index to be estimated by using tests with different degrees of completeness, something not possible with the standard approach. Our model therefore allows previously unused data to be used rather than discarded, as well as routine use of shorter tests without significant loss of precision. Beyond our specific application, our work illustrates a number of important aspects of Bayesian modelling in practice, such as the importance of hierarchical specifications to account for repeated measurements and the value of model checking via posterior predictive distributions. Copyright © 2018 John Wiley & Sons, Ltd.
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The Economy and Enlisted Retention in the Navy. Volume 2: Technical Appendixes
2014-06-01
Appendix C 13 Table 1. Selected summary statistics of Zone A sailors Statistic Men Women SRB 1.2 0.7 Months of sea duty in past 24 months 19.3 10.7...525,535 89,925 Appendix C 14 Table 2. Selected summary statistics of Zone B sailors Statistic Men Women SRB 1.0 0.5 Months of sea duty in...relationship holds for Zone A women as well as Zone B men and women as that found for Zone A men. Table 5. Changes in the unemployment and Treasury
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U.S. Virgin Islands 1983-84 School Statistical Summary.
ERIC Educational Resources Information Center
Romain, Louise
The 1984 edition of the United States Virgin Islands School Statistical Summary presents narratives, 48 tables, and 7 graphic illustrations of education in public and private elementary and secondary schools during the 1983-84 school year. Tables provide data on the U.S. Virgin Islands demography and economy, enrollment and average daily…
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Characteristics of SUN Learners (First Five Offerings). Statistical Summary No. 4.
ERIC Educational Resources Information Center
Bryan, Donna; Forman, David C.
Based on a period of two and one-half years, during which the State University of Nebraska (SUN) has offered 15 multimedia courses to Nebraska learners, this report offers a statistical summary of student characteristics. The courses offered include: Accounting I, Accounting II, Adams Chronicles, American Economy, Anyone for Tennyson, Classic…
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32 CFR 865.122 - Summary of statistics for Discharge Review Board.
Code of Federal Regulations, 2011 CFR
2011-07-01
... 32 National Defense 6 2011-07-01 2011-07-01 false Summary of statistics for Discharge Review Board. 865.122 Section 865.122 National Defense Department of Defense (Continued) DEPARTMENT OF THE AIR FORCE... Deputy Assistant Secretary of Defense (Military Personnel and Force Management) DASD(MP&FM), Office of...
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32 CFR 865.122 - Summary of statistics for Discharge Review Board.
Code of Federal Regulations, 2013 CFR
2013-07-01
... 32 National Defense 6 2013-07-01 2013-07-01 false Summary of statistics for Discharge Review Board. 865.122 Section 865.122 National Defense Department of Defense (Continued) DEPARTMENT OF THE AIR FORCE... Deputy Assistant Secretary of Defense (Military Personnel and Force Management) DASD(MP&FM), Office of...
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The Misdirection of Public Policy: Comparing and Combining Standardised Effect Sizes
ERIC Educational Resources Information Center
Simpson, Adrian
2017-01-01
Increased attention on "what works" in education has led to an emphasis on developing policy from evidence based on comparing and combining a particular statistical summary of intervention studies: the standardised effect size. It is assumed that this statistical summary provides an estimate of the educational impact of interventions and…
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1996 summary : public transportation systems in Washington state
DOT National Transportation Integrated Search
1997-09-01
The Washington State Department of Transportation (WSDOT) prepares the annual transit statistical summary. The intent for this summary, required by Section 35.58.2796 RCW, is to provide uniform data to transit providers, the Legislative Transportatio...
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Summary of Notifiable Infectious Diseases and Conditions - United States, 2015.
Adams, Deborah A; Thomas, Kimberly R; Jajosky, Ruth Ann; Foster, Loretta; Baroi, Gitangali; Sharp, Pearl; Onweh, Diana H; Schley, Alan W; Anderson, Willie J
2017-08-11
The Summary of Notifiable Infectious Diseases and Conditions - United States, 2015 (hereafter referred to as the summary) contains the official statistics, in tabular and graphical form, for the reported occurrence of nationally notifiable infectious diseases and conditions in the United States for 2015. Unless otherwise noted, data are final totals for 2015 reported as of June 30, 2016. These statistics are collected and compiled from reports sent by U.S. state and territories, New York City, and District of Columbia health departments to the National Notifiable Diseases Surveillance System (NNDSS), which is operated by CDC in collaboration with the Council of State and Territorial Epidemiologists (CSTE). This summary is available at https://www.cdc.gov/MMWR/MMWR_nd/index.html. This site also includes summary publications from previous years.
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Summary of Notifiable Infectious Diseases and Conditions - United States, 2013.
Adams, Deborah; Fullerton, Kathleen; Jajosky, Ruth; Sharp, Pearl; Onweh, Diana; Schley, Alan; Anderson, Willie; Faulkner, Amanda; Kugeler, Kiersten
2015-10-23
The Summary of Notifiable Infectious Diseases and Condition-United States, 2013 (hereafter referred to as the summary) contains the official statistics, in tabular and graphic form, for the reported occurrence of nationally notifiable infectious diseases and conditions in the United States for 2013. Unless otherwise noted, data are final totals for 2013 reported as of June 30, 2014. These statistics are collected and compiled from reports sent by U.S. state and territory, New York City, and District of Columbia health departments to the National Notifiable Diseases Surveillance System (NNDSS), which is operated by CDC in collaboration with the Council of State and Territorial Epidemiologists (CSTE). This summary is available at http://www.cdc.gov/mmwr/mmwr_nd/index.html. This site also includes summary publications from previous years.
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Summary of Notifiable Infectious Diseases and Conditions - United States, 2014.
Adams, Deborah A; Thomas, Kimberly R; Jajosky, Ruth Ann; Foster, Loretta; Sharp, Pearl; Onweh, Diana H; Schley, Alan W; Anderson, Willie J
2016-10-14
The Summary of Notifiable Infectious Diseases and Conditions-United States, 2014 (hereafter referred to as the summary) contains the official statistics, in tabular and graphic form, for the reported occurrence of nationally notifiable infectious diseases and conditions in the United States for 2014. Unless otherwise noted, data are final totals for 2014 reported as of June 30, 2015. These statistics are collected and compiled from reports sent by U.S. state and territory, New York City, and District of Columbia health departments to the National Notifiable Diseases Surveillance System (NNDSS), which is operated by CDC in collaboration with the Council of State and Territorial Epidemiologists (CSTE). This summary is available at http://www.cdc.gov/mmwr/mmwr_nd/index.html. This site also includes summary publications from previous years.
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Using Electronic Data Interchange to Report Product Quality
1993-03-01
Numbers 0 31.1 S........................ . . . . ........... .... . .--- . ... N/U 140 SPS Sampling Parameters for Summary Statistics 0 1 N/U 150 REF...DTM Date/Time Reference 0 1 N/U 190 REF Reference Numbers 021 .................................. .......... .. ... NAU 200 STA Statistics 0 1 N/U 210...Measurements 0 1 N/U 120 DTM Date/Time Reference 0 >1 N/U 130 REF Reference Numbers 0 >1 :LOOIV f-SPS N/U 140 SPS Sampling Parameters for Summary Statistics 0 1
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Understanding Statistics - Cancer Statistics
Annual reports of U.S. cancer statistics including new cases, deaths, trends, survival, prevalence, lifetime risk, and progress toward Healthy People targets, plus statistical summaries for a number of common cancer types.
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USING LINKED MICROMAP PLOTS TO CHARACTERIZE OMERNIK ECOREGIONS
The paper introduces linked micromap (LM plots for presenting environmental summaries. The LM template includes parallel sequences of micromap, able, and statistical summary graphics panels with attention paid to perceptual grouping, sorting and linking of the summary components...
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Transportation statistics annual report 1995
DOT National Transportation Integrated Search
1995-01-01
The summary of transportation statistics : programs and many of the tables and : graphs pioneered in last years Transportation : Statistics Annual Report have : been incorporated into the companion volume, : National Transportation Statistics. The...
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Summary of Key Operating Statistics: Data Collected from the 2009 Annual Institutional Report
ERIC Educational Resources Information Center
Accrediting Council for Independent Colleges and Schools, 2010
2010-01-01
The Accrediting Council for Independent Colleges and Schools (ACICS) provides the Summary of Key Operating Statistics (KOS) as an annual review of the performance and key measurements of the more than 800 private post-secondary institutions we accredit. This edition of the KOS contains information based on the 2009 Annual Institutional Reports…
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Fast and accurate estimation of the covariance between pairwise maximum likelihood distances.
Gil, Manuel
2014-01-01
Pairwise evolutionary distances are a model-based summary statistic for a set of molecular sequences. They represent the leaf-to-leaf path lengths of the underlying phylogenetic tree. Estimates of pairwise distances with overlapping paths covary because of shared mutation events. It is desirable to take these covariance structure into account to increase precision in any process that compares or combines distances. This paper introduces a fast estimator for the covariance of two pairwise maximum likelihood distances, estimated under general Markov models. The estimator is based on a conjecture (going back to Nei & Jin, 1989) which links the covariance to path lengths. It is proven here under a simple symmetric substitution model. A simulation shows that the estimator outperforms previously published ones in terms of the mean squared error.
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Fast and accurate estimation of the covariance between pairwise maximum likelihood distances
2014-01-01
Pairwise evolutionary distances are a model-based summary statistic for a set of molecular sequences. They represent the leaf-to-leaf path lengths of the underlying phylogenetic tree. Estimates of pairwise distances with overlapping paths covary because of shared mutation events. It is desirable to take these covariance structure into account to increase precision in any process that compares or combines distances. This paper introduces a fast estimator for the covariance of two pairwise maximum likelihood distances, estimated under general Markov models. The estimator is based on a conjecture (going back to Nei & Jin, 1989) which links the covariance to path lengths. It is proven here under a simple symmetric substitution model. A simulation shows that the estimator outperforms previously published ones in terms of the mean squared error. PMID:25279263
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Statistical Compression for Climate Model Output
NASA Astrophysics Data System (ADS)
Hammerling, D.; Guinness, J.; Soh, Y. J.
2017-12-01
Numerical climate model simulations run at high spatial and temporal resolutions generate massive quantities of data. As our computing capabilities continue to increase, storing all of the data is not sustainable, and thus is it important to develop methods for representing the full datasets by smaller compressed versions. We propose a statistical compression and decompression algorithm based on storing a set of summary statistics as well as a statistical model describing the conditional distribution of the full dataset given the summary statistics. We decompress the data by computing conditional expectations and conditional simulations from the model given the summary statistics. Conditional expectations represent our best estimate of the original data but are subject to oversmoothing in space and time. Conditional simulations introduce realistic small-scale noise so that the decompressed fields are neither too smooth nor too rough compared with the original data. Considerable attention is paid to accurately modeling the original dataset-one year of daily mean temperature data-particularly with regard to the inherent spatial nonstationarity in global fields, and to determining the statistics to be stored, so that the variation in the original data can be closely captured, while allowing for fast decompression and conditional emulation on modest computers.
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Cauchemez, Simon; Epperson, Scott; Biggerstaff, Matthew; Swerdlow, David; Finelli, Lyn; Ferguson, Neil M
2013-01-01
Prior to emergence in human populations, zoonoses such as SARS cause occasional infections in human populations exposed to reservoir species. The risk of widespread epidemics in humans can be assessed by monitoring the reproduction number R (average number of persons infected by a human case). However, until now, estimating R required detailed outbreak investigations of human clusters, for which resources and expertise are not always available. Additionally, existing methods do not correct for important selection and under-ascertainment biases. Here, we present simple estimation methods that overcome many of these limitations. Our approach is based on a parsimonious mathematical model of disease transmission and only requires data collected through routine surveillance and standard case investigations. We apply it to assess the transmissibility of swine-origin influenza A H3N2v-M virus in the US, Nipah virus in Malaysia and Bangladesh, and also present a non-zoonotic example (cholera in the Dominican Republic). Estimation is based on two simple summary statistics, the proportion infected by the natural reservoir among detected cases (G) and among the subset of the first detected cases in each cluster (F). If detection of a case does not affect detection of other cases from the same cluster, we find that R can be estimated by 1-G; otherwise R can be estimated by 1-F when the case detection rate is low. In more general cases, bounds on R can still be derived. We have developed a simple approach with limited data requirements that enables robust assessment of the risks posed by emerging zoonoses. We illustrate this by deriving transmissibility estimates for the H3N2v-M virus, an important step in evaluating the possible pandemic threat posed by this virus. Please see later in the article for the Editors' Summary.
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DOE Office of Scientific and Technical Information (OSTI.GOV)
Stewart, Robert N; White, Devin A; Urban, Marie L
2013-01-01
The Population Density Tables (PDT) project at the Oak Ridge National Laboratory (www.ornl.gov) is developing population density estimates for specific human activities under normal patterns of life based largely on information available in open source. Currently, activity based density estimates are based on simple summary data statistics such as range and mean. Researchers are interested in improving activity estimation and uncertainty quantification by adopting a Bayesian framework that considers both data and sociocultural knowledge. Under a Bayesian approach knowledge about population density may be encoded through the process of expert elicitation. Due to the scale of the PDT effort whichmore » considers over 250 countries, spans 40 human activity categories, and includes numerous contributors, an elicitation tool is required that can be operationalized within an enterprise data collection and reporting system. Such a method would ideally require that the contributor have minimal statistical knowledge, require minimal input by a statistician or facilitator, consider human difficulties in expressing qualitative knowledge in a quantitative setting, and provide methods by which the contributor can appraise whether their understanding and associated uncertainty was well captured. This paper introduces an algorithm that transforms answers to simple, non-statistical questions into a bivariate Gaussian distribution as the prior for the Beta distribution. Based on geometric properties of the Beta distribution parameter feasibility space and the bivariate Gaussian distribution, an automated method for encoding is developed that responds to these challenging enterprise requirements. Though created within the context of population density, this approach may be applicable to a wide array of problem domains requiring informative priors for the Beta distribution.« less
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Asquith, William H.; Barbie, Dana L.
2014-01-01
Selected summary statistics (L-moments) and estimates of respective sampling variances were computed for the 35 streamgages lacking statistically significant trends. From the L-moments and estimated sampling variances, weighted means or regional values were computed for each L-moment. An example application is included demonstrating how the L-moments could be used to evaluate the magnitude and frequency of annual mean streamflow.
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77 FR 31302 - Advisory Committee on Agriculture Statistics
Federal Register 2010, 2011, 2012, 2013, 2014
2012-05-25
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Advisory Committee on Agriculture Statistics AGENCY: National Agricultural Statistics Service, USDA. ACTION: Notice of Renewal of the Charter for the Advisory Committee on Agriculture Statistics. SUMMARY: The U.S. Department of...
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Across-cohort QC analyses of GWAS summary statistics from complex traits.
Chen, Guo-Bo; Lee, Sang Hong; Robinson, Matthew R; Trzaskowski, Maciej; Zhu, Zhi-Xiang; Winkler, Thomas W; Day, Felix R; Croteau-Chonka, Damien C; Wood, Andrew R; Locke, Adam E; Kutalik, Zoltán; Loos, Ruth J F; Frayling, Timothy M; Hirschhorn, Joel N; Yang, Jian; Wray, Naomi R; Visscher, Peter M
2016-01-01
Genome-wide association studies (GWASs) have been successful in discovering SNP trait associations for many quantitative traits and common diseases. Typically, the effect sizes of SNP alleles are very small and this requires large genome-wide association meta-analyses (GWAMAs) to maximize statistical power. A trend towards ever-larger GWAMA is likely to continue, yet dealing with summary statistics from hundreds of cohorts increases logistical and quality control problems, including unknown sample overlap, and these can lead to both false positive and false negative findings. In this study, we propose four metrics and visualization tools for GWAMA, using summary statistics from cohort-level GWASs. We propose methods to examine the concordance between demographic information, and summary statistics and methods to investigate sample overlap. (I) We use the population genetics F st statistic to verify the genetic origin of each cohort and their geographic location, and demonstrate using GWAMA data from the GIANT Consortium that geographic locations of cohorts can be recovered and outlier cohorts can be detected. (II) We conduct principal component analysis based on reported allele frequencies, and are able to recover the ancestral information for each cohort. (III) We propose a new statistic that uses the reported allelic effect sizes and their standard errors to identify significant sample overlap or heterogeneity between pairs of cohorts. (IV) To quantify unknown sample overlap across all pairs of cohorts, we propose a method that uses randomly generated genetic predictors that does not require the sharing of individual-level genotype data and does not breach individual privacy.
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Across-cohort QC analyses of GWAS summary statistics from complex traits
Chen, Guo-Bo; Lee, Sang Hong; Robinson, Matthew R; Trzaskowski, Maciej; Zhu, Zhi-Xiang; Winkler, Thomas W; Day, Felix R; Croteau-Chonka, Damien C; Wood, Andrew R; Locke, Adam E; Kutalik, Zoltán; Loos, Ruth J F; Frayling, Timothy M; Hirschhorn, Joel N; Yang, Jian; Wray, Naomi R; Visscher, Peter M
2017-01-01
Genome-wide association studies (GWASs) have been successful in discovering SNP trait associations for many quantitative traits and common diseases. Typically, the effect sizes of SNP alleles are very small and this requires large genome-wide association meta-analyses (GWAMAs) to maximize statistical power. A trend towards ever-larger GWAMA is likely to continue, yet dealing with summary statistics from hundreds of cohorts increases logistical and quality control problems, including unknown sample overlap, and these can lead to both false positive and false negative findings. In this study, we propose four metrics and visualization tools for GWAMA, using summary statistics from cohort-level GWASs. We propose methods to examine the concordance between demographic information, and summary statistics and methods to investigate sample overlap. (I) We use the population genetics Fst statistic to verify the genetic origin of each cohort and their geographic location, and demonstrate using GWAMA data from the GIANT Consortium that geographic locations of cohorts can be recovered and outlier cohorts can be detected. (II) We conduct principal component analysis based on reported allele frequencies, and are able to recover the ancestral information for each cohort. (III) We propose a new statistic that uses the reported allelic effect sizes and their standard errors to identify significant sample overlap or heterogeneity between pairs of cohorts. (IV) To quantify unknown sample overlap across all pairs of cohorts, we propose a method that uses randomly generated genetic predictors that does not require the sharing of individual-level genotype data and does not breach individual privacy. PMID:27552965
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DISTMIX: direct imputation of summary statistics for unmeasured SNPs from mixed ethnicity cohorts.
Lee, Donghyung; Bigdeli, T Bernard; Williamson, Vernell S; Vladimirov, Vladimir I; Riley, Brien P; Fanous, Ayman H; Bacanu, Silviu-Alin
2015-10-01
To increase the signal resolution for large-scale meta-analyses of genome-wide association studies, genotypes at unmeasured single nucleotide polymorphisms (SNPs) are commonly imputed using large multi-ethnic reference panels. However, the ever increasing size and ethnic diversity of both reference panels and cohorts makes genotype imputation computationally challenging for moderately sized computer clusters. Moreover, genotype imputation requires subject-level genetic data, which unlike summary statistics provided by virtually all studies, is not publicly available. While there are much less demanding methods which avoid the genotype imputation step by directly imputing SNP statistics, e.g. Directly Imputing summary STatistics (DIST) proposed by our group, their implicit assumptions make them applicable only to ethnically homogeneous cohorts. To decrease computational and access requirements for the analysis of cosmopolitan cohorts, we propose DISTMIX, which extends DIST capabilities to the analysis of mixed ethnicity cohorts. The method uses a relevant reference panel to directly impute unmeasured SNP statistics based only on statistics at measured SNPs and estimated/user-specified ethnic proportions. Simulations show that the proposed method adequately controls the Type I error rates. The 1000 Genomes panel imputation of summary statistics from the ethnically diverse Psychiatric Genetic Consortium Schizophrenia Phase 2 suggests that, when compared to genotype imputation methods, DISTMIX offers comparable imputation accuracy for only a fraction of computational resources. DISTMIX software, its reference population data, and usage examples are publicly available at http://code.google.com/p/distmix. dlee4@vcu.edu Supplementary Data are available at Bioinformatics online. © The Author 2015. Published by Oxford University Press.
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ERIC Educational Resources Information Center
Bureau of the Census (DOC), Suitland, MD.
This report presents a summary of recent trends in school and college enrollment based on the October 1977 Current Population Survey (CPS) and earlier surveys. Enrollment statistics representing growth and decline at various educational levels are evaluated in written summaries. Comparative and distributive enrollment statistics of the population…
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John, Majnu; Lencz, Todd; Malhotra, Anil K; Correll, Christoph U; Zhang, Jian-Ping
2018-06-01
Meta-analysis of genetic association studies is being increasingly used to assess phenotypic differences between genotype groups. When the underlying genetic model is assumed to be dominant or recessive, assessing the phenotype differences based on summary statistics, reported for individual studies in a meta-analysis, is a valid strategy. However, when the genetic model is additive, a similar strategy based on summary statistics will lead to biased results. This fact about the additive model is one of the things that we establish in this paper, using simulations. The main goal of this paper is to present an alternate strategy for the additive model based on simulating data for the individual studies. We show that the alternate strategy is far superior to the strategy based on summary statistics.
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77 FR 2345 - Advisory Council on Transportation Statistics; Request for Nominations
Federal Register 2010, 2011, 2012, 2013, 2014
2012-01-17
... Transportation Statistics Advisory Council on Transportation Statistics; Request for Nominations AGENCY: Research and Innovative Technology Administration (RITA), Bureau of Transportation Statistics (BTS), DOT. ACTION: Request for Nominations to the Advisory Council on Transportation Statistics (ACTS). SUMMARY: The...
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2016 Annual Disability Statistics Compendium
ERIC Educational Resources Information Center
Lauer, E. A.; Houtenville, A. J.
2017-01-01
The "Annual Disability Statistics Compendium" is a publication of statistics about people with disabilities and about the government programs which serve them. The "Compendium" is designed to serve as a summary of government statistics. The 2016 "Annual Disability Statistics Compendium" was substantially revised and…
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Statistical Techniques to Analyze Pesticide Data Program Food Residue Observations.
Szarka, Arpad Z; Hayworth, Carol G; Ramanarayanan, Tharacad S; Joseph, Robert S I
2018-06-26
The U.S. EPA conducts dietary-risk assessments to ensure that levels of pesticides on food in the U.S. food supply are safe. Often these assessments utilize conservative residue estimates, maximum residue levels (MRLs), and a high-end estimate derived from registrant-generated field-trial data sets. A more realistic estimate of consumers' pesticide exposure from food may be obtained by utilizing residues from food-monitoring programs, such as the Pesticide Data Program (PDP) of the U.S. Department of Agriculture. A substantial portion of food-residue concentrations in PDP monitoring programs are below the limits of detection (left-censored), which makes the comparison of regulatory-field-trial and PDP residue levels difficult. In this paper, we present a novel adaption of established statistical techniques, the Kaplan-Meier estimator (K-M), the robust regression on ordered statistic (ROS), and the maximum-likelihood estimator (MLE), to quantify the pesticide-residue concentrations in the presence of heavily censored data sets. The examined statistical approaches include the most commonly used parametric and nonparametric methods for handling left-censored data that have been used in the fields of medical and environmental sciences. This work presents a case study in which data of thiamethoxam residue on bell pepper generated from registrant field trials were compared with PDP-monitoring residue values. The results from the statistical techniques were evaluated and compared with commonly used simple substitution methods for the determination of summary statistics. It was found that the maximum-likelihood estimator (MLE) is the most appropriate statistical method to analyze this residue data set. Using the MLE technique, the data analyses showed that the median and mean PDP bell pepper residue levels were approximately 19 and 7 times lower, respectively, than the corresponding statistics of the field-trial residues.
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Unusual Childhood Waking as a Possible Precursor of the 1995 Kobe Earthquake
Ikeya, Motoji; Whitehead, Neil E.
2013-01-01
Simple Summary The paper investigates whether young children may waken before earthquakes through a cause other than foreshocks. It concludes there is statistical evidence for this, but the mechanism best supported is anxiety produced by Ultra Low Frequency (ULF) electromagnetic waves. Abstract Nearly 1,100 young students living in Japan at a range of distances up to 500 km from the 1995 Kobe M7 earthquake were interviewed. A statistically significant abnormal rate of early wakening before the earthquake was found, having exponential decrease with distance and a half value approaching 100 km, but decreasing much slower than from a point source such as an epicentre; instead originating from an extended area of more than 100 km in diameter. Because an improbably high amount of variance is explained, this effect is unlikely to be simply psychological and must reflect another mechanism—perhaps Ultra-Low Frequency (ULF) electromagnetic waves creating anxiety—but probably not 222Rn excess. Other work reviewed suggests these conclusions may be valid for animals in general, not just children, but would be very difficult to apply for practical earthquake prediction. PMID:26487316
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Solt, Illés; Tikk, Domonkos; Gál, Viktor; Kardkovács, Zsolt T.
2009-01-01
Objective Automated and disease-specific classification of textual clinical discharge summaries is of great importance in human life science, as it helps physicians to make medical studies by providing statistically relevant data for analysis. This can be further facilitated if, at the labeling of discharge summaries, semantic labels are also extracted from text, such as whether a given disease is present, absent, questionable in a patient, or is unmentioned in the document. The authors present a classification technique that successfully solves the semantic classification task. Design The authors introduce a context-aware rule-based semantic classification technique for use on clinical discharge summaries. The classification is performed in subsequent steps. First, some misleading parts are removed from the text; then the text is partitioned into positive, negative, and uncertain context segments, then a sequence of binary classifiers is applied to assign the appropriate semantic labels. Measurement For evaluation the authors used the documents of the i2b2 Obesity Challenge and adopted its evaluation measures: F1-macro and F1-micro for measurements. Results On the two subtasks of the Obesity Challenge (textual and intuitive classification) the system performed very well, and achieved a F1-macro = 0.80 for the textual and F1-macro = 0.67 for the intuitive tasks, and obtained second place at the textual and first place at the intuitive subtasks of the challenge. Conclusions The authors show in the paper that a simple rule-based classifier can tackle the semantic classification task more successfully than machine learning techniques, if the training data are limited and some semantic labels are very sparse. PMID:19390101
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Stone, M.A.J.; Mann, Larry J.; Kjelstrom, L.C.
1993-01-01
Statistical summaries and graphs of streamflow data were prepared for 13 gaging stations with 5 or more years of continuous record on and near the Idaho National Engineering Laboratory. Statistical summaries of streamflow data for the Big and Little Lost Rivers and Birch Creek were analyzed as a requisite for a comprehensive evaluation of the potential for flooding of facilities at the Idaho National Engineering Laboratory. The type of statistical analyses performed depended on the length of streamflow record for a gaging station. Streamflow statistics generated for stations with 5 to 9 years of record were: (1) magnitudes of monthly and annual flows; (2) duration of daily mean flows; and (3) maximum, median, and minimum daily mean flows. Streamflow statistics generated for stations with 10 or more years of record were: (1) magnitudes of monthly and annual flows; (2) magnitudes and frequencies of daily low, high, instantaneous peak (flood frequency), and annual mean flows; (3) duration of daily mean flows; (4) exceedance probabilities of annual low, high, instantaneous peak, and mean annual flows; (5) maximum, median, and minimum daily mean flows; and (6) annual mean and mean annual flows.
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DOT National Transportation Integrated Search
2015-01-01
Statistical summaries of streamflow data collected at 184 streamgages in Iowa are presented in this report. All streamgages included for analysis have at least 10 years of continuous record collected before or through September 2013. This report is a...
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Goss, Richard L.
1987-01-01
As part of the statistical summaries, trend tests were conducted. Several small uptrends were detected for total nitrogen, total organic nitrogen, total ammonia nitrogen, total nitrite nitrogen, total nitrate nitrogen, total organic plus ammonia nitrogen, total nitrite plus nitrate nitrogen, and total phosphorus. Small downtrends were detected for biochemical oxygen demand and dissolved magnesium.
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NASA Astrophysics Data System (ADS)
Hincks, Ian; Granade, Christopher; Cory, David G.
2018-01-01
The analysis of photon count data from the standard nitrogen vacancy (NV) measurement process is treated as a statistical inference problem. This has applications toward gaining better and more rigorous error bars for tasks such as parameter estimation (e.g. magnetometry), tomography, and randomized benchmarking. We start by providing a summary of the standard phenomenological model of the NV optical process in terms of Lindblad jump operators. This model is used to derive random variables describing emitted photons during measurement, to which finite visibility, dark counts, and imperfect state preparation are added. NV spin-state measurement is then stated as an abstract statistical inference problem consisting of an underlying biased coin obstructed by three Poisson rates. Relevant frequentist and Bayesian estimators are provided, discussed, and quantitatively compared. We show numerically that the risk of the maximum likelihood estimator is well approximated by the Cramér-Rao bound, for which we provide a simple formula. Of the estimators, we in particular promote the Bayes estimator, owing to its slightly better risk performance, and straightforward error propagation into more complex experiments. This is illustrated on experimental data, where quantum Hamiltonian learning is performed and cross-validated in a fully Bayesian setting, and compared to a more traditional weighted least squares fit.
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2017 Annual Disability Statistics Compendium
ERIC Educational Resources Information Center
Lauer, E. A.; Houtenville, A. J.
2018-01-01
The "Annual Disability Statistics Compendium" and its compliment, the "Annual Disability Statistics Supplement," are publications of statistics about people with disabilities and about the government programs which serve them. The "Compendium" and "Supplement" are designed to serve as a summary of government…
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T.L. Rogerson
1980-01-01
A simple simulation model to predict rainfall for individual storms in central Arkansas is described. Output includes frequency distribution tables for days between storms and for storm size classes; a storm summary by day number (January 1 = 1 and December 31 = 365) and rainfall amount; and an annual storm summary that includes monthly values for rainfall and number...
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The Performance and Retention of Female Navy Officers with a Military Spouse
2017-03-01
5 2. Female Officer Retention and Dual-Military Couples ...............7 3. Demographic Statistics ...23 III. DATA DESCRIPTION AND STATISTICS ...28 2. Independent Variables.................................................................31 C. SUMMARY STATISTICS
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Statistical inference for noisy nonlinear ecological dynamic systems.
Wood, Simon N
2010-08-26
Chaotic ecological dynamic systems defy conventional statistical analysis. Systems with near-chaotic dynamics are little better. Such systems are almost invariably driven by endogenous dynamic processes plus demographic and environmental process noise, and are only observable with error. Their sensitivity to history means that minute changes in the driving noise realization, or the system parameters, will cause drastic changes in the system trajectory. This sensitivity is inherited and amplified by the joint probability density of the observable data and the process noise, rendering it useless as the basis for obtaining measures of statistical fit. Because the joint density is the basis for the fit measures used by all conventional statistical methods, this is a major theoretical shortcoming. The inability to make well-founded statistical inferences about biological dynamic models in the chaotic and near-chaotic regimes, other than on an ad hoc basis, leaves dynamic theory without the methods of quantitative validation that are essential tools in the rest of biological science. Here I show that this impasse can be resolved in a simple and general manner, using a method that requires only the ability to simulate the observed data on a system from the dynamic model about which inferences are required. The raw data series are reduced to phase-insensitive summary statistics, quantifying local dynamic structure and the distribution of observations. Simulation is used to obtain the mean and the covariance matrix of the statistics, given model parameters, allowing the construction of a 'synthetic likelihood' that assesses model fit. This likelihood can be explored using a straightforward Markov chain Monte Carlo sampler, but one further post-processing step returns pure likelihood-based inference. I apply the method to establish the dynamic nature of the fluctuations in Nicholson's classic blowfly experiments.
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Jiang, Wei; Yu, Weichuan
2017-02-15
In genome-wide association studies (GWASs) of common diseases/traits, we often analyze multiple GWASs with the same phenotype together to discover associated genetic variants with higher power. Since it is difficult to access data with detailed individual measurements, summary-statistics-based meta-analysis methods have become popular to jointly analyze datasets from multiple GWASs. In this paper, we propose a novel summary-statistics-based joint analysis method based on controlling the joint local false discovery rate (Jlfdr). We prove that our method is the most powerful summary-statistics-based joint analysis method when controlling the false discovery rate at a certain level. In particular, the Jlfdr-based method achieves higher power than commonly used meta-analysis methods when analyzing heterogeneous datasets from multiple GWASs. Simulation experiments demonstrate the superior power of our method over meta-analysis methods. Also, our method discovers more associations than meta-analysis methods from empirical datasets of four phenotypes. The R-package is available at: http://bioinformatics.ust.hk/Jlfdr.html . eeyu@ust.hk. Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com
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2013-01-01
Background The advent of genome-wide association studies has led to many novel disease-SNP associations, opening the door to focused study on their biological underpinnings. Because of the importance of analyzing these associations, numerous statistical methods have been devoted to them. However, fewer methods have attempted to associate entire genes or genomic regions with outcomes, which is potentially more useful knowledge from a biological perspective and those methods currently implemented are often permutation-based. Results One property of some permutation-based tests is that their power varies as a function of whether significant markers are in regions of linkage disequilibrium (LD) or not, which we show from a theoretical perspective. We therefore develop two methods for quantifying the degree of association between a genomic region and outcome, both of whose power does not vary as a function of LD structure. One method uses dimension reduction to “filter” redundant information when significant LD exists in the region, while the other, called the summary-statistic test, controls for LD by scaling marker Z-statistics using knowledge of the correlation matrix of markers. An advantage of this latter test is that it does not require the original data, but only their Z-statistics from univariate regressions and an estimate of the correlation structure of markers, and we show how to modify the test to protect the type 1 error rate when the correlation structure of markers is misspecified. We apply these methods to sequence data of oral cleft and compare our results to previously proposed gene tests, in particular permutation-based ones. We evaluate the versatility of the modification of the summary-statistic test since the specification of correlation structure between markers can be inaccurate. Conclusion We find a significant association in the sequence data between the 8q24 region and oral cleft using our dimension reduction approach and a borderline significant association using the summary-statistic based approach. We also implement the summary-statistic test using Z-statistics from an already-published GWAS of Chronic Obstructive Pulmonary Disorder (COPD) and correlation structure obtained from HapMap. We experiment with the modification of this test because the correlation structure is assumed imperfectly known. PMID:24199751
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Swanson, David M; Blacker, Deborah; Alchawa, Taofik; Ludwig, Kerstin U; Mangold, Elisabeth; Lange, Christoph
2013-11-07
The advent of genome-wide association studies has led to many novel disease-SNP associations, opening the door to focused study on their biological underpinnings. Because of the importance of analyzing these associations, numerous statistical methods have been devoted to them. However, fewer methods have attempted to associate entire genes or genomic regions with outcomes, which is potentially more useful knowledge from a biological perspective and those methods currently implemented are often permutation-based. One property of some permutation-based tests is that their power varies as a function of whether significant markers are in regions of linkage disequilibrium (LD) or not, which we show from a theoretical perspective. We therefore develop two methods for quantifying the degree of association between a genomic region and outcome, both of whose power does not vary as a function of LD structure. One method uses dimension reduction to "filter" redundant information when significant LD exists in the region, while the other, called the summary-statistic test, controls for LD by scaling marker Z-statistics using knowledge of the correlation matrix of markers. An advantage of this latter test is that it does not require the original data, but only their Z-statistics from univariate regressions and an estimate of the correlation structure of markers, and we show how to modify the test to protect the type 1 error rate when the correlation structure of markers is misspecified. We apply these methods to sequence data of oral cleft and compare our results to previously proposed gene tests, in particular permutation-based ones. We evaluate the versatility of the modification of the summary-statistic test since the specification of correlation structure between markers can be inaccurate. We find a significant association in the sequence data between the 8q24 region and oral cleft using our dimension reduction approach and a borderline significant association using the summary-statistic based approach. We also implement the summary-statistic test using Z-statistics from an already-published GWAS of Chronic Obstructive Pulmonary Disorder (COPD) and correlation structure obtained from HapMap. We experiment with the modification of this test because the correlation structure is assumed imperfectly known.
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NASA Technical Reports Server (NTRS)
1983-01-01
The following subject areas are covered: summary of the NASA program goals and objectives; major mission performance; USSR spaceflights; summary comparisons of the USA and USSR space records; and selected technical, financial, and manpower data.
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Introduction to Radar Polarimetry
1991-04-23
Coulomb force 11 1,2 Static etectric fields 13 1.3 Summary 15 2 ELECTROMAGNETIC WAVES 16 2.1 Harmonic plane waves 16 2.2 The average intensity of a...harmonic plane wave 17 2.3 Spherical harmonic waves 18 2.4 Summary 19 3 THE POLARIZATION OF AN ELECTROMAGNETIC WAVE 20 3.1 The polarization ellipse 20 3.2...CHANGE OF POLARIZATION 31 4.1 Simple examples 31 4.2 Scattering at a plane interface 33 4.3 Summary 36 5 THE SCATTERING MATRIX 37 5.1 Transmission
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New approach in the quantum statistical parton distribution
NASA Astrophysics Data System (ADS)
Sohaily, Sozha; Vaziri (Khamedi), Mohammad
2017-12-01
An attempt to find simple parton distribution functions (PDFs) based on quantum statistical approach is presented. The PDFs described by the statistical model have very interesting physical properties which help to understand the structure of partons. The longitudinal portion of distribution functions are given by applying the maximum entropy principle. An interesting and simple approach to determine the statistical variables exactly without fitting and fixing parameters is surveyed. Analytic expressions of the x-dependent PDFs are obtained in the whole x region [0, 1], and the computed distributions are consistent with the experimental observations. The agreement with experimental data, gives a robust confirm of our simple presented statistical model.
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Weighing Evidence "Steampunk" Style via the Meta-Analyser.
Bowden, Jack; Jackson, Chris
2016-10-01
The funnel plot is a graphical visualization of summary data estimates from a meta-analysis, and is a useful tool for detecting departures from the standard modeling assumptions. Although perhaps not widely appreciated, a simple extension of the funnel plot can help to facilitate an intuitive interpretation of the mathematics underlying a meta-analysis at a more fundamental level, by equating it to determining the center of mass of a physical system. We used this analogy to explain the concepts of weighing evidence and of biased evidence to a young audience at the Cambridge Science Festival, without recourse to precise definitions or statistical formulas and with a little help from Sherlock Holmes! Following on from the science fair, we have developed an interactive web-application (named the Meta-Analyser) to bring these ideas to a wider audience. We envisage that our application will be a useful tool for researchers when interpreting their data. First, to facilitate a simple understanding of fixed and random effects modeling approaches; second, to assess the importance of outliers; and third, to show the impact of adjusting for small study bias. This final aim is realized by introducing a novel graphical interpretation of the well-known method of Egger regression.
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Bootstrap Methods: A Very Leisurely Look.
ERIC Educational Resources Information Center
Hinkle, Dennis E.; Winstead, Wayland H.
The Bootstrap method, a computer-intensive statistical method of estimation, is illustrated using a simple and efficient Statistical Analysis System (SAS) routine. The utility of the method for generating unknown parameters, including standard errors for simple statistics, regression coefficients, discriminant function coefficients, and factor…
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Antweiler, Ronald C.; Taylor, Howard E.
2008-01-01
The main classes of statistical treatment of below-detection limit (left-censored) environmental data for the determination of basic statistics that have been used in the literature are substitution methods, maximum likelihood, regression on order statistics (ROS), and nonparametric techniques. These treatments, along with using all instrument-generated data (even those below detection), were evaluated by examining data sets in which the true values of the censored data were known. It was found that for data sets with less than 70% censored data, the best technique overall for determination of summary statistics was the nonparametric Kaplan-Meier technique. ROS and the two substitution methods of assigning one-half the detection limit value to censored data or assigning a random number between zero and the detection limit to censored data were adequate alternatives. The use of these two substitution methods, however, requires a thorough understanding of how the laboratory censored the data. The technique of employing all instrument-generated data - including numbers below the detection limit - was found to be less adequate than the above techniques. At high degrees of censoring (greater than 70% censored data), no technique provided good estimates of summary statistics. Maximum likelihood techniques were found to be far inferior to all other treatments except substituting zero or the detection limit value to censored data.
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Lambing, J.H.
1990-01-01
Water quality sampling was conducted at eight sites on the Clark Fork and selected tributaries from Galen to Missoula, from October 1988 through September 1989. This report presents tabulations and statistical summaries of the water quality data. Included are tabulations of streamflow, onsite water quality, and concentrations of trace elements and suspended sediment for periodic samples. Also included are tables and hydrographs of daily mean values for streamflow, suspended-sediment concentration, and suspended-sediment discharge at three mainstem stations and one tributary. Statistical summaries are presented for periodic water quality data collected from March 1985 through September 1989. Selected data are illustrated by graphs showing median concentrations of trace elements in water, relation of trace-element concentrations to suspended-sediment concentrations, and median concentrations of trace elements in suspended sediment. (USGS)
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Lambing, John H.
1989-01-01
Water quality sampling was conducted at eight sites on the Clark Fork and selected tributaries from Galen to Missoula, Mont., from October 1987 through September 1988. This report presents tabulations and statistical summaries of the water quality data. Included in this report are tabulations of streamflow, onsite water quality, and concentrations of trace elements and suspended sediment for periodic samples. Also included are tables and hydrographs of daily mean values for streamflow, suspended-sediment concentration, and suspended-sediment discharge at three mainstream stations and one tributary. Statistical summaries are presented for periodic water quality data collected from March 1985 through September 1988. Selected data are illustrated by graphs showing median concentrations of trace elements in water, relation of trace element concentrations to suspended-sediment concentrations, and median concentrations of trace elements in suspended sediments. (USGS)
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Bryce, Richard; Losada Carreño, Ignacio; Kumler, Andrew; Hodge, Bri-Mathias; Roberts, Billy; Brancucci Martinez-Anido, Carlo
2018-08-01
This article contains data and summary statistics of solar irradiance and dry bulb temperature across the Hawaiian archipelago resolved on a monthly basis and spanning years 1998-2015. This data was derived in association with an article titled "Consequences of Neglecting the Interannual Variability of the Solar Resource: A Case Study of Photovoltaic Power Among the Hawaiian Islands" (Bryce et al., 2018 [7]). The solar irradiance data is presented in terms of Direct Normal Irradiance (DNI), Diffuse Horizontal Irradiance (DHI), and Global Horizontal Irradiance (GHI) and was obtained from the satellite-derived data contained in the National Solar Radiation Database (NSRDB). The temperature data is also obtained from this source. We have processed the NSRDB data and compiled these monthly resolved data sets, along with interannual summary statistics including the interannual coefficient of variability.
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These summaries provide statistics for common cancer types. The statistics include incidence, mortality, survival, stage, prevalence, and lifetime risk. Links to additional resources are included. Updated annually.
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NASA Technical Reports Server (NTRS)
1980-01-01
MATHPAC image-analysis library is collection of general-purpose mathematical and statistical routines and special-purpose data-analysis and pattern-recognition routines for image analysis. MATHPAC library consists of Linear Algebra, Optimization, Statistical-Summary, Densities and Distribution, Regression, and Statistical-Test packages.
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micromap: A Package for Linked Micromaps
The R package micromap is used to create linked micromaps, which display statistical summaries associated with areal units, or polygons. Linked micromaps provide a means to simultaneously summarize and display both statistical and geographic distributions by linking statistical ...
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The 2002 RPA Plot Summary database users manual
Patrick D. Miles; John S. Vissage; W. Brad Smith
2004-01-01
Describes the structure of the RPA 2002 Plot Summary database and provides information on generating estimates of forest statistics from these data. The RPA 2002 Plot Summary database provides a consistent framework for storing forest inventory data across all ownerships across the entire United States. The data represents the best available data as of October 2001....
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Zhu, Xiaofeng; Feng, Tao; Tayo, Bamidele O; Liang, Jingjing; Young, J Hunter; Franceschini, Nora; Smith, Jennifer A; Yanek, Lisa R; Sun, Yan V; Edwards, Todd L; Chen, Wei; Nalls, Mike; Fox, Ervin; Sale, Michele; Bottinger, Erwin; Rotimi, Charles; Liu, Yongmei; McKnight, Barbara; Liu, Kiang; Arnett, Donna K; Chakravati, Aravinda; Cooper, Richard S; Redline, Susan
2015-01-08
Genome-wide association studies (GWASs) have identified many genetic variants underlying complex traits. Many detected genetic loci harbor variants that associate with multiple-even distinct-traits. Most current analysis approaches focus on single traits, even though the final results from multiple traits are evaluated together. Such approaches miss the opportunity to systemically integrate the phenome-wide data available for genetic association analysis. In this study, we propose a general approach that can integrate association evidence from summary statistics of multiple traits, either correlated, independent, continuous, or binary traits, which might come from the same or different studies. We allow for trait heterogeneity effects. Population structure and cryptic relatedness can also be controlled. Our simulations suggest that the proposed method has improved statistical power over single-trait analysis in most of the cases we studied. We applied our method to the Continental Origins and Genetic Epidemiology Network (COGENT) African ancestry samples for three blood pressure traits and identified four loci (CHIC2, HOXA-EVX1, IGFBP1/IGFBP3, and CDH17; p < 5.0 × 10(-8)) associated with hypertension-related traits that were missed by a single-trait analysis in the original report. Six additional loci with suggestive association evidence (p < 5.0 × 10(-7)) were also observed, including CACNA1D and WNT3. Our study strongly suggests that analyzing multiple phenotypes can improve statistical power and that such analysis can be executed with the summary statistics from GWASs. Our method also provides a way to study a cross phenotype (CP) association by using summary statistics from GWASs of multiple phenotypes. Copyright © 2015 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.
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Hazing DEOCS 4.1 Construct Validity Summary
2017-08-01
Hazing DEOCS 4.1 Construct Validity Summary DEFENSE EQUAL OPPORTUNITY MANAGEMENT INSTITUTE DIRECTORATE OF...the analysis. Tables 4 – 6 provide additional information regarding the descriptive statistics and reliability of the Hazing items. Table 7 provides
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Teaching the Meaning of Statistical Techniques with Microcomputer Simulation.
ERIC Educational Resources Information Center
Lee, Motoko Y.; And Others
Students in an introductory statistics course are often preoccupied with learning the computational routines of specific summary statistics and thereby fail to develop an understanding of the meaning of those statistics or their conceptual basis. To help students develop a better understanding of the meaning of three frequently used statistics,…
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Statistical Abstract of the United States: 2012. 131st Edition
ERIC Educational Resources Information Center
US Census Bureau, 2011
2011-01-01
"The Statistical Abstract of the United States," published from 1878 to 2012, is the authoritative and comprehensive summary of statistics on the social, political, and economic organization of the United States. It is designed to serve as a convenient volume for statistical reference, and as a guide to other statistical publications and…
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NASA Technical Reports Server (NTRS)
Campbell, John P; Mckinney, Marion O
1952-01-01
A summary of methods for making dynamic lateral stability and response calculations and for estimating the aerodynamic stability derivatives required for use in these calculations is presented. The processes of performing calculations of the time histories of lateral motions, of the period and damping of these motions, and of the lateral stability boundaries are presented as a series of simple straightforward steps. Existing methods for estimating the stability derivatives are summarized and, in some cases, simple new empirical formulas are presented. Detailed estimation methods are presented for low-subsonic-speed conditions but only a brief discussion and a list of references are given for transonic and supersonic speed conditions.
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Michigan Library Statistical Report. 1997 Edition.
ERIC Educational Resources Information Center
Michigan Library, Lansing.
This 1997 edition focuses on statistical data supplied by Michigan public libraries, public library cooperatives, and those public libraries which serve as regional or subregional outlets for blind and physically handicapped patrons. Statistics on academic libraries are also presented in this edition, and summary statistics for prior fiscal years…
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Statistical methods to detect novel genetic variants using publicly available GWAS summary data.
Guo, Bin; Wu, Baolin
2018-03-01
We propose statistical methods to detect novel genetic variants using only genome-wide association studies (GWAS) summary data without access to raw genotype and phenotype data. With more and more summary data being posted for public access in the post GWAS era, the proposed methods are practically very useful to identify additional interesting genetic variants and shed lights on the underlying disease mechanism. We illustrate the utility of our proposed methods with application to GWAS meta-analysis results of fasting glucose from the international MAGIC consortium. We found several novel genome-wide significant loci that are worth further study. Copyright © 2018 Elsevier Ltd. All rights reserved.
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Federal Register 2010, 2011, 2012, 2013, 2014
2012-06-07
... for Health Information Technology. SUMMARY: As part of the HHS Open Government Plan, the HealthData... Data Platform Simple Sign-On Challenge'' AGENCY: Office of the National Coordinator for Health... service data. HDP will deliver greater potential for new data driven insights into complex interactions of...
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Thomas, Kimberly; Jajosky, Ruth; Coates, Ralph J; Calvert, Geoffrey M; Dewey-Mattia, Daniel; Raymond, Jaime; Singh, Simple D
2017-08-11
The Summary of Notifiable Noninfectious Conditions and Disease Outbreaks: Surveillance Data Published Between April 1, 2016 and January 31, 2017 - United States, herein referred to as the Summary (Noninfectious), contains official statistics for nationally notifiable noninfectious conditions and disease outbreaks. This Summary (Noninfectious) is being published in the same volume of MMWR as the annual Summary of Notifiable Infectious Diseases and Conditions (1). Data on notifiable noninfectious conditions and disease outbreaks from prior years have been published previously (2,3).
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Babies and math: A meta-analysis of infants' simple arithmetic competence.
Christodoulou, Joan; Lac, Andrew; Moore, David S
2017-08-01
Wynn's (1992) seminal research reported that infants looked longer at stimuli representing "incorrect" versus "correct" solutions of basic addition and subtraction problems and concluded that infants have innate arithmetical abilities. Since then, infancy researchers have attempted to replicate this effect, yielding mixed findings. The present meta-analysis aimed to systematically compile and synthesize all of the primary replications and extensions of Wynn (1992) that have been conducted to date. The synthesis included 12 studies consisting of 26 independent samples and 550 unique infants. The summary effect, computed using a random-effects model, was statistically significant, d = +0.34, p < .001, suggesting that the phenomenon Wynn originally reported is reliable. Five different tests of publication bias yielded mixed results, suggesting that while a moderate level of publication bias is probable, the summary effect would be positive even after accounting for this issue. Out of the 10 metamoderators tested, none were found to be significant, but most of the moderator subgroups were significantly different from a null effect. Although this meta-analysis provides support for Wynn's original findings, further research is warranted to understand the underlying mechanisms responsible for infants' visual preferences for "mathematically incorrect" test stimuli. (PsycINFO Database Record (c) 2017 APA, all rights reserved).
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Habegger, Lukas; Balasubramanian, Suganthi; Chen, David Z.; Khurana, Ekta; Sboner, Andrea; Harmanci, Arif; Rozowsky, Joel; Clarke, Declan; Snyder, Michael; Gerstein, Mark
2012-01-01
Summary: The functional annotation of variants obtained through sequencing projects is generally assumed to be a simple intersection of genomic coordinates with genomic features. However, complexities arise for several reasons, including the differential effects of a variant on alternatively spliced transcripts, as well as the difficulty in assessing the impact of small insertions/deletions and large structural variants. Taking these factors into consideration, we developed the Variant Annotation Tool (VAT) to functionally annotate variants from multiple personal genomes at the transcript level as well as obtain summary statistics across genes and individuals. VAT also allows visualization of the effects of different variants, integrates allele frequencies and genotype data from the underlying individuals and facilitates comparative analysis between different groups of individuals. VAT can either be run through a command-line interface or as a web application. Finally, in order to enable on-demand access and to minimize unnecessary transfers of large data files, VAT can be run as a virtual machine in a cloud-computing environment. Availability and Implementation: VAT is implemented in C and PHP. The VAT web service, Amazon Machine Image, source code and detailed documentation are available at vat.gersteinlab.org. Contact: lukas.habegger@yale.edu or mark.gerstein@yale.edu Supplementary Information: Supplementary data are available at Bioinformatics online. PMID:22743228
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Meta-analysis of gene-level associations for rare variants based on single-variant statistics.
Hu, Yi-Juan; Berndt, Sonja I; Gustafsson, Stefan; Ganna, Andrea; Hirschhorn, Joel; North, Kari E; Ingelsson, Erik; Lin, Dan-Yu
2013-08-08
Meta-analysis of genome-wide association studies (GWASs) has led to the discoveries of many common variants associated with complex human diseases. There is a growing recognition that identifying "causal" rare variants also requires large-scale meta-analysis. The fact that association tests with rare variants are performed at the gene level rather than at the variant level poses unprecedented challenges in the meta-analysis. First, different studies may adopt different gene-level tests, so the results are not compatible. Second, gene-level tests require multivariate statistics (i.e., components of the test statistic and their covariance matrix), which are difficult to obtain. To overcome these challenges, we propose to perform gene-level tests for rare variants by combining the results of single-variant analysis (i.e., p values of association tests and effect estimates) from participating studies. This simple strategy is possible because of an insight that multivariate statistics can be recovered from single-variant statistics, together with the correlation matrix of the single-variant test statistics, which can be estimated from one of the participating studies or from a publicly available database. We show both theoretically and numerically that the proposed meta-analysis approach provides accurate control of the type I error and is as powerful as joint analysis of individual participant data. This approach accommodates any disease phenotype and any study design and produces all commonly used gene-level tests. An application to the GWAS summary results of the Genetic Investigation of ANthropometric Traits (GIANT) consortium reveals rare and low-frequency variants associated with human height. The relevant software is freely available. Copyright © 2013 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.
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SOCR Analyses - an Instructional Java Web-based Statistical Analysis Toolkit.
Chu, Annie; Cui, Jenny; Dinov, Ivo D
2009-03-01
The Statistical Online Computational Resource (SOCR) designs web-based tools for educational use in a variety of undergraduate courses (Dinov 2006). Several studies have demonstrated that these resources significantly improve students' motivation and learning experiences (Dinov et al. 2008). SOCR Analyses is a new component that concentrates on data modeling and analysis using parametric and non-parametric techniques supported with graphical model diagnostics. Currently implemented analyses include commonly used models in undergraduate statistics courses like linear models (Simple Linear Regression, Multiple Linear Regression, One-Way and Two-Way ANOVA). In addition, we implemented tests for sample comparisons, such as t-test in the parametric category; and Wilcoxon rank sum test, Kruskal-Wallis test, Friedman's test, in the non-parametric category. SOCR Analyses also include several hypothesis test models, such as Contingency tables, Friedman's test and Fisher's exact test.The code itself is open source (http://socr.googlecode.com/), hoping to contribute to the efforts of the statistical computing community. The code includes functionality for each specific analysis model and it has general utilities that can be applied in various statistical computing tasks. For example, concrete methods with API (Application Programming Interface) have been implemented in statistical summary, least square solutions of general linear models, rank calculations, etc. HTML interfaces, tutorials, source code, activities, and data are freely available via the web (www.SOCR.ucla.edu). Code examples for developers and demos for educators are provided on the SOCR Wiki website.In this article, the pedagogical utilization of the SOCR Analyses is discussed, as well as the underlying design framework. As the SOCR project is on-going and more functions and tools are being added to it, these resources are constantly improved. The reader is strongly encouraged to check the SOCR site for most updated information and newly added models.
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Two-Bin Kanban: Ordering Impact at Navy Medical Center San Diego
2016-06-01
book cost $2.94 on December 12, 2012. This same book cost $3.76 on June 30, 2015. These two costs were averaged to $3.35 in both the pretest (2013...with summary statistics based on those observations (Kabacoff, 2011, p. 112). Replacing the groups of observations with summary statistics allows the...ABSTRACT (maximum 200 words) One of the most important aspects of hospital administration is the medical consumable inventory process. The Navy Bureau of
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Investigation of Shock Wave Attenuation in Porous Materials
2009-12-01
Foam ...... 38 Table 4. Summary of Material Characteristics of Polyurethane Foams ............ 40 Table 5. Summary of Experiment Results...polyurethane foam , he performed a simple symmetric impact simulation to investigate the material properties and wave propagation characteristics of the...describes the characteristics of the two foam materials studied in this research, namely the aluminum metal foam and rigid polyurethane foam , which
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NASA Technical Reports Server (NTRS)
Nastrom, G. D.; Jasperson, W. H.
1983-01-01
Temperature data obtained by the Global Atmospheric Sampling Program (GASP) during the period March 1975 to July 1979 are compiled to form flight summaries of static air temperature and a geographic temperature climatology. The flight summaries include the height and location of the coldest observed temperature and the mean flight level, temperature and the standard deviation of temperature for each flight as well as for flight segments. These summaries are ordered by route and month. The temperature climatology was computed for all statistically independent temperture data for each flight. The grid used consists of 5 deg latitude, 30 deg longitude and 2000 feet vertical resolution from FL270 to FL430 for each month of the year. The number of statistically independent observations, their mean, standard deviation and the empirical 98, 50, 16, 2 and .3 probability percentiles are presented.
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Federal Register 2010, 2011, 2012, 2013, 2014
2011-12-30
... for OMB Review; Comment Request; Mass Layoff Statistics Program ACTION: Notice. SUMMARY: The... request (ICR) titled, ``Mass Layoff Statistics Program,'' to the Office of Management and Budget (OMB) for... Statistics (BLS). Title of Collection: Mass Layoff Statistics Program. OMB Control Number: 1220-0090...
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Streamflow statistics for selected streams in North Dakota, Minnesota, Manitoba, and Saskatchewan
Williams-Sether, Tara
2012-01-01
Statistical summaries of streamflow data for the periods of record through water year 2009 for selected active and discontinued U.S. Geological Survey streamflow-gaging stations in North Dakota, Minnesota, Manitoba, and Saskatchewan were compiled. The summaries for each streamflow-gaging station include a brief station description, a graph of the annual peak and annual mean discharge for the period of record, statistics of monthly and annual mean discharges, monthly and annual flow durations, probability of occurrence of annual high discharges, annual peak discharge and corresponding gage height for the period of record, and monthly and annual mean discharges for the period of record.
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Statistical summaries of water-quality data for two coal areas of Jackson County, Colorado
Kuhn, Gerhard
1982-01-01
Statistical summaries of water-quality data are compiled for eight streams in two separate coal areas of Jackson County, Colo. The quality-of-water data were collected from October 1976 to September 1980. For inorganic constituents, the maximum, minimum, and mean concentrations, as well as other statistics are presented; for minor elements, only the maximum, minimum, and mean values are included. Least-squares equations (regressions) are also given relating specific conductance of the streams to the concentration of the major ions. The observed range of specific conductance was 85 to 1,150 micromhos per centimeter for the eight sites. (USGS)
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Statistical wiring of thalamic receptive fields optimizes spatial sampling of the retinal image
Wang, Xin; Sommer, Friedrich T.; Hirsch, Judith A.
2014-01-01
Summary It is widely assumed that mosaics of retinal ganglion cells establish the optimal representation of visual space. However, relay cells in the visual thalamus often receive convergent input from several retinal afferents and, in cat, outnumber ganglion cells. To explore how the thalamus transforms the retinal image, we built a model of the retinothalamic circuit using experimental data and simple wiring rules. The model shows how the thalamus might form a resampled map of visual space with the potential to facilitate detection of stimulus position in the presence of sensor noise. Bayesian decoding conducted with the model provides support for this scenario. Despite its benefits, however, resampling introduces image blur, thus impairing edge perception. Whole-cell recordings obtained in vivo suggest that this problem is mitigated by arrangements of excitation and inhibition within the receptive field that effectively boost contrast borders, much like strategies used in digital image processing. PMID:24559681
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SOBA: sequence ontology bioinformatics analysis.
Moore, Barry; Fan, Guozhen; Eilbeck, Karen
2010-07-01
The advent of cheaper, faster sequencing technologies has pushed the task of sequence annotation from the exclusive domain of large-scale multi-national sequencing projects to that of research laboratories and small consortia. The bioinformatics burden placed on these laboratories, some with very little programming experience can be daunting. Fortunately, there exist software libraries and pipelines designed with these groups in mind, to ease the transition from an assembled genome to an annotated and accessible genome resource. We have developed the Sequence Ontology Bioinformatics Analysis (SOBA) tool to provide a simple statistical and graphical summary of an annotated genome. We envisage its use during annotation jamborees, genome comparison and for use by developers for rapid feedback during annotation software development and testing. SOBA also provides annotation consistency feedback to ensure correct use of terminology within annotations, and guides users to add new terms to the Sequence Ontology when required. SOBA is available at http://www.sequenceontology.org/cgi-bin/soba.cgi.
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Structures of Neural Correlation and How They Favor Coding
Franke, Felix; Fiscella, Michele; Sevelev, Maksim; Roska, Botond; Hierlemann, Andreas; da Silveira, Rava Azeredo
2017-01-01
Summary The neural representation of information suffers from “noise”—the trial-to-trial variability in the response of neurons. The impact of correlated noise upon population coding has been debated, but a direct connection between theory and experiment remains tenuous. Here, we substantiate this connection and propose a refined theoretical picture. Using simultaneous recordings from a population of direction-selective retinal ganglion cells, we demonstrate that coding benefits from noise correlations. The effect is appreciable already in small populations, yet it is a collective phenomenon. Furthermore, the stimulus-dependent structure of correlation is key. We develop simple functional models that capture the stimulus-dependent statistics. We then use them to quantify the performance of population coding, which depends upon interplays of feature sensitivities and noise correlations in the population. Because favorable structures of correlation emerge robustly in circuits with noisy, nonlinear elements, they will arise and benefit coding beyond the confines of retina. PMID:26796692
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Nursing education: contradictions and challenges of pedagogical practice.
Pinto, Joelma Batista Tebaldi; Pepe, Alda Muniz
2007-01-01
This study deals with the nursing curriculum, pedagogical practice and education. Nowadays, this theme has taken up considerable space in academic debates. Thus, this study aimed to get empirical knowledge and provide an analytical description of the academic reality of nursing education at Santa Cruz State University in the undergraduate nursing course. This is a descriptive study, which may provide a new view of the problem, with careful observation, description, and exploration of the situation aspects, interpreting the reality, without interfering in it and, consequently, being open to new studies. Descriptive statistics with simple frequency and percentage calculation was applied. In summary, results indicate that professors and students have difficulties to evaluate the curriculum. In addition, the curriculum under study is characterized as a collection curriculum, with a pedagogical practice predominantly directed at the traditional model. Hence, nursing education still shows features of the biomedical-technical model.
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Analysis of Professional and Pre-Accession Characteristics and Junior Naval Officer Performance
2018-03-01
REVIEW .............................................5 A. NAVY PERFORMANCE EVALUATION SYSTEM ............................5 B. PROFESSIONAL...17 A. DATA DESCRIPTION ...........................................................................17 B. SUMMARY...STATISTICS ......................................................................24 C. DESCRIPTIVE STATISTICS
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Zhang, Han; Wheeler, William; Hyland, Paula L; Yang, Yifan; Shi, Jianxin; Chatterjee, Nilanjan; Yu, Kai
2016-06-01
Meta-analysis of multiple genome-wide association studies (GWAS) has become an effective approach for detecting single nucleotide polymorphism (SNP) associations with complex traits. However, it is difficult to integrate the readily accessible SNP-level summary statistics from a meta-analysis into more powerful multi-marker testing procedures, which generally require individual-level genetic data. We developed a general procedure called Summary based Adaptive Rank Truncated Product (sARTP) for conducting gene and pathway meta-analysis that uses only SNP-level summary statistics in combination with genotype correlation estimated from a panel of individual-level genetic data. We demonstrated the validity and power advantage of sARTP through empirical and simulated data. We conducted a comprehensive pathway-based meta-analysis with sARTP on type 2 diabetes (T2D) by integrating SNP-level summary statistics from two large studies consisting of 19,809 T2D cases and 111,181 controls with European ancestry. Among 4,713 candidate pathways from which genes in neighborhoods of 170 GWAS established T2D loci were excluded, we detected 43 T2D globally significant pathways (with Bonferroni corrected p-values < 0.05), which included the insulin signaling pathway and T2D pathway defined by KEGG, as well as the pathways defined according to specific gene expression patterns on pancreatic adenocarcinoma, hepatocellular carcinoma, and bladder carcinoma. Using summary data from 8 eastern Asian T2D GWAS with 6,952 cases and 11,865 controls, we showed 7 out of the 43 pathways identified in European populations remained to be significant in eastern Asians at the false discovery rate of 0.1. We created an R package and a web-based tool for sARTP with the capability to analyze pathways with thousands of genes and tens of thousands of SNPs.
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Zhang, Han; Wheeler, William; Hyland, Paula L.; Yang, Yifan; Shi, Jianxin; Chatterjee, Nilanjan; Yu, Kai
2016-01-01
Meta-analysis of multiple genome-wide association studies (GWAS) has become an effective approach for detecting single nucleotide polymorphism (SNP) associations with complex traits. However, it is difficult to integrate the readily accessible SNP-level summary statistics from a meta-analysis into more powerful multi-marker testing procedures, which generally require individual-level genetic data. We developed a general procedure called Summary based Adaptive Rank Truncated Product (sARTP) for conducting gene and pathway meta-analysis that uses only SNP-level summary statistics in combination with genotype correlation estimated from a panel of individual-level genetic data. We demonstrated the validity and power advantage of sARTP through empirical and simulated data. We conducted a comprehensive pathway-based meta-analysis with sARTP on type 2 diabetes (T2D) by integrating SNP-level summary statistics from two large studies consisting of 19,809 T2D cases and 111,181 controls with European ancestry. Among 4,713 candidate pathways from which genes in neighborhoods of 170 GWAS established T2D loci were excluded, we detected 43 T2D globally significant pathways (with Bonferroni corrected p-values < 0.05), which included the insulin signaling pathway and T2D pathway defined by KEGG, as well as the pathways defined according to specific gene expression patterns on pancreatic adenocarcinoma, hepatocellular carcinoma, and bladder carcinoma. Using summary data from 8 eastern Asian T2D GWAS with 6,952 cases and 11,865 controls, we showed 7 out of the 43 pathways identified in European populations remained to be significant in eastern Asians at the false discovery rate of 0.1. We created an R package and a web-based tool for sARTP with the capability to analyze pathways with thousands of genes and tens of thousands of SNPs. PMID:27362418
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2000 Iowa crash facts : a summary of motor vehicle crash statistics on Iowa roadways
DOT National Transportation Integrated Search
2000-01-01
All statistics are gathered and calculated by the Iowa Department of Transportations Office of Driver Services. National statistics : are obtained from Traffic Safety Facts 2000 published by the U.S. Department of Transportations National...
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Evaluation of methods for managing censored results when calculating the geometric mean.
Mikkonen, Hannah G; Clarke, Bradley O; Dasika, Raghava; Wallis, Christian J; Reichman, Suzie M
2018-01-01
Currently, there are conflicting views on the best statistical methods for managing censored environmental data. The method commonly applied by environmental science researchers and professionals is to substitute half the limit of reporting for derivation of summary statistics. This approach has been criticised by some researchers, raising questions around the interpretation of historical scientific data. This study evaluated four complete soil datasets, at three levels of simulated censorship, to test the accuracy of a range of censored data management methods for calculation of the geometric mean. The methods assessed included removal of censored results, substitution of a fixed value (near zero, half the limit of reporting and the limit of reporting), substitution by nearest neighbour imputation, maximum likelihood estimation, regression on order substitution and Kaplan-Meier/survival analysis. This is the first time such a comprehensive range of censored data management methods have been applied to assess the accuracy of calculation of the geometric mean. The results of this study show that, for describing the geometric mean, the simple method of substitution of half the limit of reporting is comparable or more accurate than alternative censored data management methods, including nearest neighbour imputation methods. Copyright © 2017 Elsevier Ltd. All rights reserved.
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Evaluation of normalization methods in mammalian microRNA-Seq data
Garmire, Lana Xia; Subramaniam, Shankar
2012-01-01
Simple total tag count normalization is inadequate for microRNA sequencing data generated from the next generation sequencing technology. However, so far systematic evaluation of normalization methods on microRNA sequencing data is lacking. We comprehensively evaluate seven commonly used normalization methods including global normalization, Lowess normalization, Trimmed Mean Method (TMM), quantile normalization, scaling normalization, variance stabilization, and invariant method. We assess these methods on two individual experimental data sets with the empirical statistical metrics of mean square error (MSE) and Kolmogorov-Smirnov (K-S) statistic. Additionally, we evaluate the methods with results from quantitative PCR validation. Our results consistently show that Lowess normalization and quantile normalization perform the best, whereas TMM, a method applied to the RNA-Sequencing normalization, performs the worst. The poor performance of TMM normalization is further evidenced by abnormal results from the test of differential expression (DE) of microRNA-Seq data. Comparing with the models used for DE, the choice of normalization method is the primary factor that affects the results of DE. In summary, Lowess normalization and quantile normalization are recommended for normalizing microRNA-Seq data, whereas the TMM method should be used with caution. PMID:22532701
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A Bayesian Approach to Evaluating Consistency between Climate Model Output and Observations
NASA Astrophysics Data System (ADS)
Braverman, A. J.; Cressie, N.; Teixeira, J.
2010-12-01
Like other scientific and engineering problems that involve physical modeling of complex systems, climate models can be evaluated and diagnosed by comparing their output to observations of similar quantities. Though the global remote sensing data record is relatively short by climate research standards, these data offer opportunities to evaluate model predictions in new ways. For example, remote sensing data are spatially and temporally dense enough to provide distributional information that goes beyond simple moments to allow quantification of temporal and spatial dependence structures. In this talk, we propose a new method for exploiting these rich data sets using a Bayesian paradigm. For a collection of climate models, we calculate posterior probabilities its members best represent the physical system each seeks to reproduce. The posterior probability is based on the likelihood that a chosen summary statistic, computed from observations, would be obtained when the model's output is considered as a realization from a stochastic process. By exploring how posterior probabilities change with different statistics, we may paint a more quantitative and complete picture of the strengths and weaknesses of the models relative to the observations. We demonstrate our method using model output from the CMIP archive, and observations from NASA's Atmospheric Infrared Sounder.
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2004 Missouri state highway system : traffic accident statistics
DOT National Transportation Integrated Search
2005-06-27
The following summary of traffic accidents represents only those accidents that have occurred on the State Highway : System of Missouri in 2004. The information contained in this publication is a summary of the accident reports : provided to the Miss...
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Your Travtek Driving Experience -- Rental Users Study Data Summary
DOT National Transportation Integrated Search
1993-11-01
THIS REPORT DOCUMENTS THE QUESTIONNAIRE DATA COLLECTED AND THE INSTRUMENTS USED FOR THE TRAVTEK EVALUATION TASK BL - RENTAL USERS STUDY. IT PRESENTS SUMMARY STATISTICS FOR THE PRIMARY DRIVERS DERIVED FROM THE RENTER STUDY, WHICH WAS CONDUCTED FROM MA...
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1999 Missouri state highway system : traffic accident statistics
DOT National Transportation Integrated Search
2001-01-17
The following summary of traffic accidents represents only those accidents that have occurred on the State : Highway System of Missouri in 1999. The information contained in this publication is a summary of the accident : reports provided to the Miss...
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2001 Missouri state highway system : traffic accident statistics
DOT National Transportation Integrated Search
2002-09-30
The following summary of traffic accidents represents only those accidents that have occurred on the State : Highway System of Missouri in 2001. The information contained in this publication is a summary of the accident : reports provided to the Miss...
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2000 Missouri state highway system : traffic accident statistics
DOT National Transportation Integrated Search
2001-10-25
The following summary of traffic accidents represents only those accidents that have occurred on the State : Highway System of Missouri in 2000. The information contained in this publication is a summary of the accident : reports provided to the Miss...
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2002 Missouri state highway system : traffic accident statistics
DOT National Transportation Integrated Search
2003-07-02
The following summary of traffic accidents represents only those accidents that have occurred on the State Highway : System of Missouri in 2002. The information contained in this publication is a summary of the accident reports : provided to the Miss...
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2005 Missouri state highway system : traffic accident statistics
DOT National Transportation Integrated Search
2006-08-31
The following summary of traffic accidents represents only those accidents that have occurred on the State Highway : System of Missouri in 2005. The information contained in this publication is a summary of the accident reports : provided to the Miss...
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2003 Missouri state highway system : traffic accident statistics
DOT National Transportation Integrated Search
2004-08-12
The following summary of traffic accidents represents only those accidents that have occurred on the State Highway : System of Missouri in 2003. The information contained in this publication is a summary of the accident reports : provided to the Miss...
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Wildlife strikes to Canadian aircraft : 2008 summary report
DOT National Transportation Integrated Search
2008-01-01
This report provides a summary of Canadian wildlife strike statistics for 2008. It is : intended for the use of all stakeholders involved with Airport Bird and Mammal Control : Programs. Included in this group are pilots, airfield staff, airline main...
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Lu, Qiongshi; Li, Boyang; Ou, Derek; Erlendsdottir, Margret; Powles, Ryan L; Jiang, Tony; Hu, Yiming; Chang, David; Jin, Chentian; Dai, Wei; He, Qidu; Liu, Zefeng; Mukherjee, Shubhabrata; Crane, Paul K; Zhao, Hongyu
2017-12-07
Despite the success of large-scale genome-wide association studies (GWASs) on complex traits, our understanding of their genetic architecture is far from complete. Jointly modeling multiple traits' genetic profiles has provided insights into the shared genetic basis of many complex traits. However, large-scale inference sets a high bar for both statistical power and biological interpretability. Here we introduce a principled framework to estimate annotation-stratified genetic covariance between traits using GWAS summary statistics. Through theoretical and numerical analyses, we demonstrate that our method provides accurate covariance estimates, thereby enabling researchers to dissect both the shared and distinct genetic architecture across traits to better understand their etiologies. Among 50 complex traits with publicly accessible GWAS summary statistics (N total ≈ 4.5 million), we identified more than 170 pairs with statistically significant genetic covariance. In particular, we found strong genetic covariance between late-onset Alzheimer disease (LOAD) and amyotrophic lateral sclerosis (ALS), two major neurodegenerative diseases, in single-nucleotide polymorphisms (SNPs) with high minor allele frequencies and in SNPs located in the predicted functional genome. Joint analysis of LOAD, ALS, and other traits highlights LOAD's correlation with cognitive traits and hints at an autoimmune component for ALS. Copyright © 2017 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.
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DOT National Transportation Integrated Search
2005-01-01
2005 SELECTED STATISTICS provides a summary of recent : transportation-related data collected and reported by the Kansas : Department of Transportation (KDOT). : Information regarding the following modes of transportation in the : State of Kansas -- ...
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More Cancer Types - SEER Cancer Stat Facts
Cancer Statistical Fact Sheets are summaries of common cancer types developed to provide an overview of frequently-requested cancer statistics including incidence, mortality, survival, stage, prevalence, and lifetime risk.
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DOT National Transportation Integrated Search
1997-10-01
In order to provide waterborne commerce information as soon as possible, the Waterborne Commerce Statistics Center (WCSC) has prepared this summary document of estimated waterborne commerce statistics for calendar year 1996. The foreign import and ex...
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DOT National Transportation Integrated Search
1999-07-30
In order to provide waterborne commerce information as soon as possible, the Waterborne Commerce Statistics Center(WCSC) has prepared this summary document of estimated waterborne commerce statistics for calendar year 1998. The foreign import and exp...
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Financial statistics major US publicly owned electric utilities 1996
DOE Office of Scientific and Technical Information (OSTI.GOV)
NONE
1998-03-01
The 1996 edition of The Financial Statistics of Major US Publicly Owned Electric Utilities publication presents 5 years (1992 through 1996) of summary financial data and current year detailed financial data on the major publicly owned electric utilities. The objective of the publication is to provide Federal and State governments, industry, and the general public with current and historical data that can be used for policymaking and decision making purposes related to publicly owned electric utility issues. Generator and nongenerator summaries are presented in this publication. Five years of summary financial data are provided. Summaries of generators for fiscal yearsmore » ending June 30 and December 31, nongenerators for fiscal years ending June 30 and December 31, and summaries of all respondents are provided. The composite tables present aggregates of income statement and balance sheet data, as well as financial indicators. Composite tables also display electric operation and maintenance expenses, electric utility plant, number of consumers, sales of electricity, and operating revenue, and electric energy account data. 2 figs., 32 tabs.« less
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Federal Register 2010, 2011, 2012, 2013, 2014
2011-12-01
... Statistics Relating to Competitive Need Limitations AGENCY: Office of the United States Trade Representative. ACTION: Notice. SUMMARY: This notice is to inform the public of the availability of import statistics for... System of Preferences (GSP) program. These import statistics identify some articles for which the 2011...
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Statistical Report of Kentucky Public Libraries, Fiscal Year 1997-1998.
ERIC Educational Resources Information Center
Bank, Jay, Comp.
This report contains statistical information on Kentucky public libraries for fiscal year 1997-1998 taken from the Annual Report of Public Libraries. The report is separated into seven sections: summary of library statistics for the most recent year (1998) and comparisons with the three prior years; graphs showing statistical trends in library…
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Ector, Hugo
2010-12-01
I still remember my first book on statistics: "Elementary statistics with applications in medicine and the biological sciences" by Frederick E. Croxton. For me, it has been the start of pursuing understanding statistics in daily life and in medical practice. It was the first volume in a long row of books. In his introduction, Croxton pretends that"nearly everyone involved in any aspect of medicine needs to have some knowledge of statistics". The reality is that for many clinicians, statistics are limited to a "P < 0.05 = ok". I do not blame my colleagues who omit the paragraph on statistical methods. They have never had the opportunity to learn concise and clear descriptions of the key features. I have experienced how some authors can describe difficult methods in a well understandable language. Others fail completely. As a teacher, I tell my students that life is impossible without a basic knowledge of statistics. This feeling has resulted in an annual seminar of 90 minutes. This tutorial is the summary of this seminar. It is a summary and a transcription of the best pages I have detected.
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2007 Missouri state highway system : traffic accident statistics
DOT National Transportation Integrated Search
2008-08-25
The following summary of traffic crashes represents only those crashes that have occurred on the State Highway : System of Missouri in 2007. The information contained in this publication is a summary of the crash reports : provided to the Missouri De...
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2009 Missouri state highway system : traffic accident statistics
DOT National Transportation Integrated Search
2010-08-03
The following summary of traffic crashes represents only those crashes that have occurred on the State Highway : System of Missouri in 2009. The information contained in this publication is a summary of the crash reports : provided to the Missouri De...
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2008 Missouri state highway system : traffic accident statistics
DOT National Transportation Integrated Search
2009-08-13
The following summary of traffic crashes represents only those crashes that have occurred on the State Highway : System of Missouri in 2008. The information contained in this publication is a summary of the crash reports : provided to the Missouri De...
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Federal Register 2010, 2011, 2012, 2013, 2014
2012-08-21
... data and summary statistics, addressing the program's current design and coverage; a summary of testing... identified in the OMB Inventory of Approved ICR Burdens. This decrease is due to (1) a mathematical error...
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Your TravTek driving experience : rental users study : data summary
DOT National Transportation Integrated Search
1993-11-01
This report documents the questionnaire data collected and the instruments used for the TravTek : Evaluation Task Bl - Rental Users Study. It presents summary statistics for the primary drivers : derived from the renter study, which was conducted fro...
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2006 Missouri state highway system : traffic accident statistics
DOT National Transportation Integrated Search
2007-07-18
The following summary of traffic crashes represents only those crashes that have occurred on the State Highway : System of Missouri in 2006. The information contained in this publication is a summary of the crash reports : provided to the Missouri De...
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DOT National Transportation Integrated Search
1995-12-01
This publication, 1995 SELECTED STATISTICS, was designed to provide a summary of transportation-related data collected and reported by the Kansas Department of Transportation (KDOT). Information regarding the following modes of transportation in the ...
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Lambing, J.H.
1988-01-01
Water quality sampling was conducted at seven sites on the Clark Fork and selected tributaries from Deer Lodge to Missoula, Montana, from July 1986 through September 1987. This report presents tabulations and statistical summaries of the water quality data. The data presented in this report supplement previous data collected from March 1985 through June 1986 for six of the seven sites. Included in this report are tabulations of instantaneous values of streamflow, onsite water quality, hardness, and concentrations of trace elements and suspended sediment for periodic samples. Also included are tables and hydrographs of daily mean values for streamflow, suspended-sediment concentration, and suspended-sediment discharge at three mainstream stations and one tributary. Statistical summaries are presented for periodic water quality data collected from March 1986 through September 1987. Selected data are illustrated by graphs showing median concentrations to suspended-sediment concentrations, and median concentrations of trace elements in suspended sediment. (USGS)
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Pare, Guillaume; Mao, Shihong; Deng, Wei Q
2016-06-08
Despite considerable efforts, known genetic associations only explain a small fraction of predicted heritability. Regional associations combine information from multiple contiguous genetic variants and can improve variance explained at established association loci. However, regional associations are not easily amenable to estimation using summary association statistics because of sensitivity to linkage disequilibrium (LD). We now propose a novel method, LD Adjusted Regional Genetic Variance (LARGV), to estimate phenotypic variance explained by regional associations using summary statistics while accounting for LD. Our method is asymptotically equivalent to a multiple linear regression model when no interaction or haplotype effects are present. It has several applications, such as ranking of genetic regions according to variance explained or comparison of variance explained by two or more regions. Using height and BMI data from the Health Retirement Study (N = 7,776), we show that most genetic variance lies in a small proportion of the genome and that previously identified linkage peaks have higher than expected regional variance.
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Pare, Guillaume; Mao, Shihong; Deng, Wei Q.
2016-01-01
Despite considerable efforts, known genetic associations only explain a small fraction of predicted heritability. Regional associations combine information from multiple contiguous genetic variants and can improve variance explained at established association loci. However, regional associations are not easily amenable to estimation using summary association statistics because of sensitivity to linkage disequilibrium (LD). We now propose a novel method, LD Adjusted Regional Genetic Variance (LARGV), to estimate phenotypic variance explained by regional associations using summary statistics while accounting for LD. Our method is asymptotically equivalent to a multiple linear regression model when no interaction or haplotype effects are present. It has several applications, such as ranking of genetic regions according to variance explained or comparison of variance explained by two or more regions. Using height and BMI data from the Health Retirement Study (N = 7,776), we show that most genetic variance lies in a small proportion of the genome and that previously identified linkage peaks have higher than expected regional variance. PMID:27273519
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Education Statistics Quarterly, Spring 2001.
ERIC Educational Resources Information Center
Education Statistics Quarterly, 2001
2001-01-01
The "Education Statistics Quarterly" gives a comprehensive overview of work done across all parts of the National Center for Education Statistics (NCES). Each issue contains short publications, summaries, and descriptions that cover all NCES publications, data products and funding opportunities developed over a 3-month period. Each issue…
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Illinois crash facts and statistics, 2008
DOT National Transportation Integrated Search
2008-01-01
The 2008 Illinois Crash Facts & Statistics includes : data that illustrate Illinois safety accomplishments and : provides information about key events in the history of : traffic-safety related legislation. Summaries of safety : belt usage, ...
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Federal Register 2010, 2011, 2012, 2013, 2014
2011-05-26
... Sentenced Population Movement--National Prisoner Statistics, Extension and Revision of Existing Collection...) Title of the Form/Collection: Summary of Sentenced Population Movement--National Prisoner Statistics (3...
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Saiki, Jun; Holcombe, Alex O
2012-03-06
Sudden change of every object in a display is typically conspicuous. We find however that in the presence of a secondary task, with a display of moving dots, it can be difficult to detect a sudden change in color of all the dots. A field of 200 dots, half red and half green, half moving rightward and half moving leftward, gave the appearance of two surfaces. When all 200 dots simultaneously switched color between red and green, performance in detecting the switch was very poor. A key display characteristic was that the color proportions on each surface (summary statistics) were not affected by the color switch. When the color switch is accompanied by a change in these summary statistics, people perform well in detecting the switch, suggesting that the secondary task does not disrupt the availability of this statistical information. These findings suggest that when the change is missed, the old and new colors were represented, but the color-location pattern (binding of colors to locations) was not represented or not compared. Even after extended viewing, changes to the individual color-location pattern are not available, suggesting that the feeling of seeing these details is misleading.
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Meng, Xiang-He; Shen, Hui; Chen, Xiang-Ding; Xiao, Hong-Mei; Deng, Hong-Wen
2018-03-01
Genome-wide association studies (GWAS) have successfully identified numerous genetic variants associated with diverse complex phenotypes and diseases, and provided tremendous opportunities for further analyses using summary association statistics. Recently, Pickrell et al. developed a robust method for causal inference using independent putative causal SNPs. However, this method may fail to infer the causal relationship between two phenotypes when only a limited number of independent putative causal SNPs identified. Here, we extended Pickrell's method to make it more applicable for the general situations. We extended the causal inference method by replacing the putative causal SNPs with the lead SNPs (the set of the most significant SNPs in each independent locus) and tested the performance of our extended method using both simulation and empirical data. Simulations suggested that when the same number of genetic variants is used, our extended method had similar distribution of test statistic under the null model as well as comparable power under the causal model compared with the original method by Pickrell et al. But in practice, our extended method would generally be more powerful because the number of independent lead SNPs was often larger than the number of independent putative causal SNPs. And including more SNPs, on the other hand, would not cause more false positives. By applying our extended method to summary statistics from GWAS for blood metabolites and femoral neck bone mineral density (FN-BMD), we successfully identified ten blood metabolites that may causally influence FN-BMD. We extended a causal inference method for inferring putative causal relationship between two phenotypes using summary statistics from GWAS, and identified a number of potential causal metabolites for FN-BMD, which may provide novel insights into the pathophysiological mechanisms underlying osteoporosis.
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A Simple Illustration for the Need of Multiple Comparison Procedures
ERIC Educational Resources Information Center
Carter, Rickey E.
2010-01-01
Statistical adjustments to accommodate multiple comparisons are routinely covered in introductory statistical courses. The fundamental rationale for such adjustments, however, may not be readily understood. This article presents a simple illustration to help remedy this.
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DOT National Transportation Integrated Search
1995-05-01
This report provides a summary on the state of the national mass transit industry by highlighting aggregate financial and operational characteristics and trend information for key statistics and performance indicators. These aggregate data represent ...
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Illinois crash facts and statistics, 2007
DOT National Transportation Integrated Search
2007-01-01
The 2007 Illinois Crash Facts & Statistics includes : data that illustrate these accomplishments and also : provides information about key events in the history of : traffic safety-related legislation. Also included, are : summaries of motorcyc...
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State transportation profile : summary
DOT National Transportation Integrated Search
2003-12-01
The Bureau of Transportation Statistics (BTS) presents a statistical : profile of transportation in the 50 states and the District of Columbia. : This document supplements a previously published series of individual : state profiles. Like the individ...
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Licensed operating reactors: Status summary report, data as of December 31, 1995. Volume 20
DOE Office of Scientific and Technical Information (OSTI.GOV)
NONE
1996-06-01
The US Nuclear Regulatory Commission`s monthly summary of licensed nuclear power reactor data is based primarily on the operating data report submitted by licensees for each unit. This report is divided into two sections: the first contains summary highlights and the second contains data on each individual unit in commercial operation. Section 1 availability factors, capacity factors, and forced outage rates are simple arithmetic averages. Section 2 items in the cumulative column are generally as reported by the licensees and notes to the use of weighted averages and starting dates other than commercial operation are provided.
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Federal Register 2010, 2011, 2012, 2013, 2014
2011-01-27
... Operating Statistics for Large Certificated Air Carriers AGENCY: Research & Innovative Technology Administration (RITA), Bureau of Transportation Statistics (BTS), DOT. ACTION: Notice. SUMMARY: In compliance with the Paperwork Reduction Act of 1995, Public Law 104-13, the Bureau of Transportation Statistics...
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Federal Register 2010, 2011, 2012, 2013, 2014
2011-12-29
... for OMB Review; Comment Request; Local Area Unemployment Statistics Program ACTION: Notice. SUMMARY... collection request (ICR) titled, ``Local Area Unemployment Statistics Program,'' to the Office of Management... of Collection: Local Area Unemployment Statistics Program. OMB Control Number: 1220-0017. Affected...
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Phillips, Carl V
2004-01-01
Background Publication bias, as typically defined, refers to the decreased likelihood of studies' results being published when they are near the null, not statistically significant, or otherwise "less interesting." But choices about how to analyze the data and which results to report create a publication bias within the published results, a bias I label "publication bias in situ" (PBIS). Discussion PBIS may create much greater bias in the literature than traditionally defined publication bias (the failure to publish any result from a study). The causes of PBIS are well known, consisting of various decisions about reporting that are influenced by the data. But its impact is not generally appreciated, and very little attention is devoted to it. What attention there is consists largely of rules for statistical analysis that are impractical and do not actually reduce the bias in reported estimates. PBIS cannot be reduced by statistical tools because it is not fundamentally a problem of statistics, but rather of non-statistical choices and plain language interpretations. PBIS should be recognized as a phenomenon worthy of study – it is extremely common and probably has a huge impact on results reported in the literature – and there should be greater systematic efforts to identify and reduce it. The paper presents examples, including results of a recent HIV vaccine trial, that show how easily PBIS can have a large impact on reported results, as well as how there can be no simple answer to it. Summary PBIS is a major problem, worthy of substantially more attention than it receives. There are ways to reduce the bias, but they are very seldom employed because they are largely unrecognized. PMID:15296515
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Summary of National Transportation Statistics (1973)
DOT National Transportation Integrated Search
1975-01-01
This report is a compendium of selected national-level transportation statistics. Included are cost, inventory, and performance data describing the passenger and cargo operations of the following moes: air carrier, genral aviation, automobile, bus, t...
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Summary of National Transportation Statistics (1974)
DOT National Transportation Integrated Search
1976-06-01
This report is a compendium of selected national-level transportation statistics. Included are cost, inventory, and performance data describing the passenger and cargo operations of the following modes: air carrier, general aviation, automobile, bus,...
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Summary of National Transportation Statistics (1972)
DOT National Transportation Integrated Search
1974-06-01
This report is a compendium of selected national-level transportation statistics. Included are cost, inventory, and performance data describing the passenger and cargo operations of the following modes: air carrier, general aviation, automobile, bus,...
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Weighing Evidence “Steampunk” Style via the Meta-Analyser
Bowden, Jack; Jackson, Chris
2016-01-01
ABSTRACT The funnel plot is a graphical visualization of summary data estimates from a meta-analysis, and is a useful tool for detecting departures from the standard modeling assumptions. Although perhaps not widely appreciated, a simple extension of the funnel plot can help to facilitate an intuitive interpretation of the mathematics underlying a meta-analysis at a more fundamental level, by equating it to determining the center of mass of a physical system. We used this analogy to explain the concepts of weighing evidence and of biased evidence to a young audience at the Cambridge Science Festival, without recourse to precise definitions or statistical formulas and with a little help from Sherlock Holmes! Following on from the science fair, we have developed an interactive web-application (named the Meta-Analyser) to bring these ideas to a wider audience. We envisage that our application will be a useful tool for researchers when interpreting their data. First, to facilitate a simple understanding of fixed and random effects modeling approaches; second, to assess the importance of outliers; and third, to show the impact of adjusting for small study bias. This final aim is realized by introducing a novel graphical interpretation of the well-known method of Egger regression. PMID:28003684
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NASA Astrophysics Data System (ADS)
Roberts, Michael J.; Braun, Noah O.; Sinclair, Thomas R.; Lobell, David B.; Schlenker, Wolfram
2017-09-01
We compare predictions of a simple process-based crop model (Soltani and Sinclair 2012), a simple statistical model (Schlenker and Roberts 2009), and a combination of both models to actual maize yields on a large, representative sample of farmer-managed fields in the Corn Belt region of the United States. After statistical post-model calibration, the process model (Simple Simulation Model, or SSM) predicts actual outcomes slightly better than the statistical model, but the combined model performs significantly better than either model. The SSM, statistical model and combined model all show similar relationships with precipitation, while the SSM better accounts for temporal patterns of precipitation, vapor pressure deficit and solar radiation. The statistical and combined models show a more negative impact associated with extreme heat for which the process model does not account. Due to the extreme heat effect, predicted impacts under uniform climate change scenarios are considerably more severe for the statistical and combined models than for the process-based model.
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Peer Review Documents Related to the Evaluation of ...
BMDS is one of the Agency's premier tools for estimating risk assessments, therefore the validity and reliability of its statistical models are of paramount importance. This page provides links to peer review and expert summaries of the BMDS application and its models as they were developed and eventually released documenting the rigorous review process taken to provide the best science tools available for statistical modeling. This page provides links to peer reviews and expert summaries of the BMDS applications and its models as they were developed and eventually released.
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Dyess AFB, Texas. Revised Uniform Summary of Surface Weather Observations (RUSSWO). Parts A-F.
1988-01-01
Observations (RUSSWO); Dyess AFB TX; Texas; Abilene TX; Army Airfield Abilene TX; USTX722665. 19 Abstract: A six-part statistical data summary of...ELAT. AND S TANDARD Di-V I AtIONjS PEEESNTCVIS [’j ,T INCLUDE INCOMPLETE MONTHS. FOUR OR MORE MONTHS ARE NEEDED TO ADMILTE THE SE STATISTIC S AND...TA L NLMMYt (,F OPSIRW8IONS: 93" 6LOfAL CLPUATOLOGV FRANC " PERCENTAGE FPEiUtICY OF OCCURRENCE OF SURFACE WIND DIRECTION VERSUS WIND SPEED LiSAF7 I
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Cadman, D; Goldsmith, C
1986-01-01
Global indices, which aggregate multiple health or function attributes into a single summary indicator, are useful measures in health research. Two key issues must be addressed in the initial stages of index construction from the universe of possible health and function attributes, which ones should be included in a new index? and how simple can the statistical model be to combine attributes into a single numeric index value? Factorial experimental designs were used in the initial stages of developing a function index for evaluating a program for the care of young handicapped children. Beginning with eight attributes judged important to the goals of the program by clinicians, social preference values for different function states were obtained from 32 parents of handicapped children and 32 members of the community. Using category rating methods each rater scored 16 written multi-attribute case descriptions which contained information about a child's status for all eight attributes. Either a good or poor level of each function attribute and age 3 or 5 years were described in each case. Thus, 2(8) = 256 different cases were rated. Two factorial design plans were selected and used to allocate case descriptions to raters. Analysis of variance determined that seven of the eight clinician selected attributes were required in a social value based index for handicapped children. Most importantly, the subsequent steps of index construction could be greatly simplified by the finding that a simple additive statistical model without complex attribute interaction terms was adequate for the index. We conclude that factorial experimental designs are an efficient, feasible and powerful tool for the initial stages of constructing a multi-attribute health index.
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Federal Register 2010, 2011, 2012, 2013, 2014
2010-06-21
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Notice of Intent To Request... Statistics Service, USDA. ACTION: Notice and request for comments. SUMMARY: In accordance with the Paperwork Reduction Act of 1995, this notice announces the intention of the National Agricultural Statistics Service...
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Federal Register 2010, 2011, 2012, 2013, 2014
2013-10-25
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Notice of Intent To Request... Statistics Service, USDA. ACTION: Notice and request for comments. SUMMARY: In accordance with the Paperwork Reduction Act of 1995, this notice announces the intention of the National Agricultural Statistics Service...
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Federal Register 2010, 2011, 2012, 2013, 2014
2012-03-19
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Federal Register 2010, 2011, 2012, 2013, 2014
2011-07-27
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Federal Register 2010, 2011, 2012, 2013, 2014
2012-06-20
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Notice of Intent To Request... Statistics Service, USDA. ACTION: Notice and request for comments. SUMMARY: In accordance with the Paperwork Reduction Act of 1995, this notice announces the intention of the National Agricultural Statistics Service...
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Federal Register 2010, 2011, 2012, 2013, 2014
2013-02-14
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Notice of Intent To Request... Statistics Service, USDA. ACTION: Notice and request for comments. SUMMARY: In accordance with the Paperwork Reduction Act of 1995 this notice announces the intention of the National Agricultural Statistics Service...
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Federal Register 2010, 2011, 2012, 2013, 2014
2013-02-14
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Notice of Intent to Request... Statistics Service, USDA. ACTION: Notice and request for comments. SUMMARY: In accordance with the Paperwork Reduction Act of 1995, this notice announces the intention of the National Agricultural Statistics Service...
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Federal Register 2010, 2011, 2012, 2013, 2014
2011-10-18
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Notice of Intent to Request... Statistics Service, USDA. ACTION: Notice and request for comments. SUMMARY: In accordance with the Paperwork Reduction Act of 1995, this notice announces the intention of the National Agricultural Statistics Service...
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Federal Register 2010, 2011, 2012, 2013, 2014
2012-02-06
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Notice of Intent To Request... Statistics Service. ACTION: Notice and request for comments. SUMMARY: In accordance with the Paperwork Reduction Act of 1995, this notice announces the intention of the National Agricultural Statistics Service...
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Federal Register 2010, 2011, 2012, 2013, 2014
2013-10-30
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Notice of Intent To Request... Statistics Service, USDA. ACTION: Notice and request for comments. SUMMARY: In accordance with the Paperwork Reduction Act of 1995, this notice announces the intention of the National Agricultural Statistics Service...
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Federal Register 2010, 2011, 2012, 2013, 2014
2013-02-14
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Notice of Intent To Request... Statistics Service, USDA. ACTION: Notice and request for comments. SUMMARY: In accordance with the Paperwork Reduction Act of 1995, this notice announces the intention of the National Agricultural Statistics Service...
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78 FR 26611 - Notice of Intent To Seek Approval To Conduct an Information Collection
Federal Register 2010, 2011, 2012, 2013, 2014
2013-05-07
... Statistics Service Notice of Intent To Seek Approval To Conduct an Information Collection AGENCY: National Agricultural Statistics Service, USDA. ACTION: Notice and request for comments. SUMMARY: In accordance with the Paperwork Reduction Act of 1995, this notice announces the intention of the National Agricultural Statistics...
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Federal Register 2010, 2011, 2012, 2013, 2014
2012-11-16
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Notice of Intent To Request... Statistics Service, USDA. ACTION: Notice and request for comments. SUMMARY: In accordance with the Paperwork Reduction Act of 1995, this notice announces the intention the National Agricultural Statistics Service...
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A simple method of equine limb force vector analysis and its potential applications.
Hobbs, Sarah Jane; Robinson, Mark A; Clayton, Hilary M
2018-01-01
Ground reaction forces (GRF) measured during equine gait analysis are typically evaluated by analyzing discrete values obtained from continuous force-time data for the vertical, longitudinal and transverse GRF components. This paper describes a simple, temporo-spatial method of displaying and analyzing sagittal plane GRF vectors. In addition, the application of statistical parametric mapping (SPM) is introduced to analyse differences between contra-lateral fore and hindlimb force-time curves throughout the stance phase. The overall aim of the study was to demonstrate alternative methods of evaluating functional (a)symmetry within horses. GRF and kinematic data were collected from 10 horses trotting over a series of four force plates (120 Hz). The kinematic data were used to determine clean hoof contacts. The stance phase of each hoof was determined using a 50 N threshold. Vertical and longitudinal GRF for each stance phase were plotted both as force-time curves and as force vector diagrams in which vectors originating at the centre of pressure on the force plate were drawn at intervals of 8.3 ms for the duration of stance. Visual evaluation was facilitated by overlay of the vector diagrams for different limbs. Summary vectors representing the magnitude (VecMag) and direction (VecAng) of the mean force over the entire stance phase were superimposed on the force vector diagram. Typical measurements extracted from the force-time curves (peak forces, impulses) were compared with VecMag and VecAng using partial correlation (controlling for speed). Paired samples t -tests (left v. right diagonal pair comparison and high v. low vertical force diagonal pair comparison) were performed on discrete and vector variables using traditional methods and Hotelling's T 2 tests on normalized stance phase data using SPM. Evidence from traditional statistical tests suggested that VecMag is more influenced by the vertical force and impulse, whereas VecAng is more influenced by the longitudinal force and impulse. When used to evaluate mean data from the group of ten sound horses, SPM did not identify differences between the left and right contralateral limb pairs or between limb pairs classified according to directional asymmetry. When evaluating a single horse, three periods were identified during which differences in the forces between the left and right forelimbs exceeded the critical threshold ( p < .01). Traditional statistical analysis of 2D GRF peak values, summary vector variables and visual evaluation of force vector diagrams gave harmonious results and both methods identified the same inter-limb asymmetries. As alpha was more tightly controlled using SPM, significance was only found in the individual horse although T 2 plots followed the same trends as discrete analysis for the group. The techniques of force vector analysis and SPM hold promise for investigations of sidedness and asymmetry in horses.
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Cichonska, Anna; Rousu, Juho; Marttinen, Pekka; Kangas, Antti J; Soininen, Pasi; Lehtimäki, Terho; Raitakari, Olli T; Järvelin, Marjo-Riitta; Salomaa, Veikko; Ala-Korpela, Mika; Ripatti, Samuli; Pirinen, Matti
2016-07-01
A dominant approach to genetic association studies is to perform univariate tests between genotype-phenotype pairs. However, analyzing related traits together increases statistical power, and certain complex associations become detectable only when several variants are tested jointly. Currently, modest sample sizes of individual cohorts, and restricted availability of individual-level genotype-phenotype data across the cohorts limit conducting multivariate tests. We introduce metaCCA, a computational framework for summary statistics-based analysis of a single or multiple studies that allows multivariate representation of both genotype and phenotype. It extends the statistical technique of canonical correlation analysis to the setting where original individual-level records are not available, and employs a covariance shrinkage algorithm to achieve robustness.Multivariate meta-analysis of two Finnish studies of nuclear magnetic resonance metabolomics by metaCCA, using standard univariate output from the program SNPTEST, shows an excellent agreement with the pooled individual-level analysis of original data. Motivated by strong multivariate signals in the lipid genes tested, we envision that multivariate association testing using metaCCA has a great potential to provide novel insights from already published summary statistics from high-throughput phenotyping technologies. Code is available at https://github.com/aalto-ics-kepaco anna.cichonska@helsinki.fi or matti.pirinen@helsinki.fi Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press.
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Cichonska, Anna; Rousu, Juho; Marttinen, Pekka; Kangas, Antti J.; Soininen, Pasi; Lehtimäki, Terho; Raitakari, Olli T.; Järvelin, Marjo-Riitta; Salomaa, Veikko; Ala-Korpela, Mika; Ripatti, Samuli; Pirinen, Matti
2016-01-01
Motivation: A dominant approach to genetic association studies is to perform univariate tests between genotype-phenotype pairs. However, analyzing related traits together increases statistical power, and certain complex associations become detectable only when several variants are tested jointly. Currently, modest sample sizes of individual cohorts, and restricted availability of individual-level genotype-phenotype data across the cohorts limit conducting multivariate tests. Results: We introduce metaCCA, a computational framework for summary statistics-based analysis of a single or multiple studies that allows multivariate representation of both genotype and phenotype. It extends the statistical technique of canonical correlation analysis to the setting where original individual-level records are not available, and employs a covariance shrinkage algorithm to achieve robustness. Multivariate meta-analysis of two Finnish studies of nuclear magnetic resonance metabolomics by metaCCA, using standard univariate output from the program SNPTEST, shows an excellent agreement with the pooled individual-level analysis of original data. Motivated by strong multivariate signals in the lipid genes tested, we envision that multivariate association testing using metaCCA has a great potential to provide novel insights from already published summary statistics from high-throughput phenotyping technologies. Availability and implementation: Code is available at https://github.com/aalto-ics-kepaco Contacts: anna.cichonska@helsinki.fi or matti.pirinen@helsinki.fi Supplementary information: Supplementary data are available at Bioinformatics online. PMID:27153689
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Atmospheric Science Data Center
2013-03-08
... Features ASDC's RSS feed with highlights about Earth Science Data at NASA Langley Research Center ASDC Scheduled ... about maintenance About RSS What is RSS? RSS (Really Simple Syndication, or Rich Site Summary) ...
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National Transportation Statistics (Annual Report, 1975)
DOT National Transportation Integrated Search
1977-01-01
This report is a summary of selected national transportation statistics from a wide variety of government and private sources. Included are cost, inventory, and performance data describing the passenger and cargo operations of the following modes: ai...
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National Transportation Statistics (Annual Report, 1976)
DOT National Transportation Integrated Search
1978-01-01
This report is a summary of selected national transportation statistics from a wide variety of government and private sources. Included are cost, inventory, and performance data describing the passenger and cargo operations of the following modes: ai...
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National Transportation Statistics (Annual Report, 1980)
DOT National Transportation Integrated Search
1980-01-01
This report is a summary of selected national transportation statistics from a wide variety of government and private sources. Included are cost, inventory, and performance data describing the passenger and cargo operations of the following modes: ai...
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National Transportation Statistics (Annual Report, 1983)
DOT National Transportation Integrated Search
1983-01-01
This report is a summary of selected national transportation statistics from a wide variety of government and private resources. Included are cost, inventory, and performance data describing the passenger and cargo operations of the following modes: ...
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National Transportation Statistics (Annual Report, 1981)
DOT National Transportation Integrated Search
1981-01-01
This report is a summary of selected national transportation statistics from a wide variety of government and private sources. Included are cost, inventory, and performance data describing the passenger and cargo operations of the following modes: ai...
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National Transportation Statistics (Annual Report, 1982)
DOT National Transportation Integrated Search
1982-11-01
This report is a summary of selected national transportation statistics from a wide variety of government and private sources. Included are cost, inventory, and performance data describing the passenger and cargo operations of the following modes: ai...
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National Transportation Statistics (Annual Report, 1984)
DOT National Transportation Integrated Search
1984-08-01
This report is a summary of selected national transportation statistics from a wide variety of government and private sources. Included are cost, inventory, and performance data describing the passenger and cargo operations of the following modes: ai...
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University of Alaska 1984 Statistical Summary.
ERIC Educational Resources Information Center
Spargo, Frank R.; Gaylord, Thomas A.
Designed to inform decisions about the University of Alaska's (UA's) budget, direction, scope, and academic thrusts, this report provides statewide, unit, and campus data for the two- and four-year colleges in the university system. First, a systemwide summary offers information on finances, enrollments, student loan program participation,…
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Preoperative identification of a suspicious adnexal mass: a systematic review and meta-analysis.
Dodge, Jason E; Covens, Allan L; Lacchetti, Christina; Elit, Laurie M; Le, Tien; Devries-Aboud, Michaela; Fung-Kee-Fung, Michael
2012-07-01
To systematically review the existing literature in order to determine the optimal strategy for preoperative identification of the adnexal mass suspicious for ovarian cancer. A review of all systematic reviews and guidelines published between 1999 and 2009 was conducted as a first step. After the identification of a 2004 AHRQ systematic review on the topic, searches of MEDLINE for studies published since 2004 was also conducted to update and supplement the evidentiary base. A bivariate, random-effects meta-regression model was used to produce summary estimates of sensitivity and specificity and to plot summary ROC curves with 95% confidence regions. Four meta-analyses and 53 primary studies were included in this review. The diagnostic performance of each technology was compared and contrasted based on the summary data on sensitivity and specificity obtained from the meta-analysis. Results suggest that 3D ultrasonography has both a higher sensitivity and specificity when compared to 2D ultrasound. Established morphological scoring systems also performed with respectable sensitivity and specificity, each with equivalent diagnostic competence. Explicit scoring systems did not perform as well as other diagnostic testing methods. Assessment of an adnexal mass by colour Doppler technology was neither as sensitive nor as specific as simple ultrasonography. Of the three imaging modalities considered, MRI appeared to perform the best, although results were not statistically different from CT. PET did not perform as well as either MRI or CT. The measurement of the CA-125 tumour marker appears to be less reliable than do other available assessment methods. The best available evidence was collected and included in this rigorous systematic review and meta-analysis. The abundant evidentiary base provided the context and direction for the diagnosis of early-staged ovarian cancer. Copyright © 2012 Elsevier Inc. All rights reserved.
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40 CFR Appendix IV to Part 264 - Cochran's Approximation to the Behrens-Fisher Students' t-test
Code of Federal Regulations, 2011 CFR
2011-07-01
... summary measures to calculate a t-statistic (t*) and a comparison t-statistic (tc). The t* value is compared to the tc value and a conclusion reached as to whether there has been a statistically significant... made in collecting the background data. The t-statistic (tc), against which t* will be compared...
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40 CFR Appendix IV to Part 264 - Cochran's Approximation to the Behrens-Fisher Students' t-test
Code of Federal Regulations, 2010 CFR
2010-07-01
... summary measures to calculate a t-statistic (t*) and a comparison t-statistic (tc). The t* value is compared to the tc value and a conclusion reached as to whether there has been a statistically significant... made in collecting the background data. The t-statistic (tc), against which t* will be compared...
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Federal Register 2010, 2011, 2012, 2013, 2014
2011-03-02
... Statistical Area 630 in the Gulf of Alaska AGENCY: National Marine Fisheries Service (NMFS), National Oceanic.... SUMMARY: NMFS is opening directed fishing for pollock in Statistical Area 630 of the Gulf of Alaska (GOA... catch (TAC) of pollock in Statistical Area 630 of the GOA. DATES: Effective 1200 hrs, Alaska local time...
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Federal Register 2010, 2011, 2012, 2013, 2014
2011-02-28
... Statistical Area 610 in the Gulf of Alaska AGENCY: National Marine Fisheries Service (NMFS), National Oceanic.... SUMMARY: NMFS is opening directed fishing for pollock in Statistical Area 610 of the Gulf of Alaska (GOA... pollock in Statistical Area 610 of the GOA. DATES: Effective 1200 hrs, Alaska local time (A.l.t...
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Wald, David S; Butt, Shahena; Bestwick, Jonathan P
2015-10-01
Mobile telephone text messaging is a simple potential solution to the failure to take medications as directed. There is uncertainty over the effectiveness of 1-way text messaging (sending text message reminders only) compared with 2-way text messaging (sending reminders and receiving replies confirming whether medication has been taken) as a means of improving medication adherence. A meta-analysis of 8 randomized trials (1994 patients) that tested the effectiveness of text messaging on medication adherence was performed. The trials were divided into 2 groups: trials using 1-way text messaging versus no text messaging and trials using 2-way text messaging versus no text messaging. The summary estimates of the effect of the 2 methods of text messaging (1-way or 2-way) were compared. The summary relative risk estimate was 1.04 (95% confidence interval, 0.97-1.11) for 1-way text messaging and 1.23 (95% confidence interval, 1.13-1.35) for 2-way text messaging. The difference in effect between the 2 methods was statistically significant (P = .007). Two-way text messaging is associated with substantially improved medication adherence compared with 1-way text messaging. This has important implications in the provision of mobile-based messaging in the management of patients taking medication for the prevention of chronic disease. Copyright © 2015 Elsevier Inc. All rights reserved.
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The perceptual processing capacity of summary statistics between and within feature dimensions
Attarha, Mouna; Moore, Cathleen M.
2015-01-01
The simultaneous–sequential method was used to test the processing capacity of statistical summary representations both within and between feature dimensions. Sixteen gratings varied with respect to their size and orientation. In Experiment 1, the gratings were equally divided into four separate smaller sets, one of which with a mean size that was larger or smaller than the other three sets, and one of which with a mean orientation that was tilted more leftward or rightward. The task was to report the mean size and orientation of the oddball sets. This therefore required four summary representations for size and another four for orientation. The sets were presented at the same time in the simultaneous condition or across two temporal frames in the sequential condition. Experiment 1 showed evidence of a sequential advantage, suggesting that the system may be limited with respect to establishing multiple within-feature summaries. Experiment 2 eliminates the possibility that some aspect of the task, other than averaging, was contributing to this observed limitation. In Experiment 3, the same 16 gratings appeared as one large superset, and therefore the task only required one summary representation for size and another one for orientation. Equal simultaneous–sequential performance indicated that between-feature summaries are capacity free. These findings challenge the view that within-feature summaries drive a global sense of visual continuity across areas of the peripheral visual field, and suggest a shift in focus to seeking an understanding of how between-feature summaries in one area of the environment control behavior. PMID:26360153
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Correlation, evaluation, and extension of linearized theories for tire motion and wheel shimmy
NASA Technical Reports Server (NTRS)
Smiley, Robert F
1957-01-01
An evaluation is made of the existing theories of a linearized tire motion and wheel shimmy. It is demonstrated that most of the previously published theories represent varying degrees of approximation to a summary theory developed in this report which is a minor modification of the basic theory of Von Schlippe and Dietrich. In most cases where strong differences exist between the previously published theories and summary theory, the previously published theories are shown to possess certain deficiencies. A series of systematic approximations to the summary theory is developed for the treatment of problems too simple to merit the use of the complete summary theory, and procedures are discussed for applying the summary theory and its systematic approximations to the shimmy of more complex landing-gear structures than have previously been considered. Comparisons of the existing experimental data with the predictions of the summary theory and the systematic approximations provide a fair substantiation of the more detailed approximate theories.
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National Transportation Statistics (Annual Report, 1985)
DOT National Transportation Integrated Search
1985-06-01
This report is a summary of selected national transportation statistics from a wide variety of government and private sources. Featured in the report are cost, inventory, and performance data describing the passenger and cargo operations of the follo...
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National Transportation Statistics (Annual Report, 1986)
DOT National Transportation Integrated Search
1986-07-01
This report is a summary of selected national transportation statistics from a wide variety of government and private sources. Featured in the report are cost, inventory, and performance data describing the passenger and cargo operations of the follo...
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Generalized massive optimal data compression
NASA Astrophysics Data System (ADS)
Alsing, Justin; Wandelt, Benjamin
2018-05-01
In this paper, we provide a general procedure for optimally compressing N data down to n summary statistics, where n is equal to the number of parameters of interest. We show that compression to the score function - the gradient of the log-likelihood with respect to the parameters - yields n compressed statistics that are optimal in the sense that they preserve the Fisher information content of the data. Our method generalizes earlier work on linear Karhunen-Loéve compression for Gaussian data whilst recovering both lossless linear compression and quadratic estimation as special cases when they are optimal. We give a unified treatment that also includes the general non-Gaussian case as long as mild regularity conditions are satisfied, producing optimal non-linear summary statistics when appropriate. As a worked example, we derive explicitly the n optimal compressed statistics for Gaussian data in the general case where both the mean and covariance depend on the parameters.
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The Georgia Health Education Study: A Summary Report.
ERIC Educational Resources Information Center
Georgia Univ., Athens. Dept. of Health and Safety.
This summary review of the Georgia Health Education Study is a statistical presentation of scores achieved by over four thousand freshman college students in the university system of Georgia to questions on health knowledge. Data compiled from the administration of the Fast-Tyson Health Knowledge Test (1975 revision) indicates that subject…
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Distinct encoding of risk and value in economic choice between multiple risky options☆
Wright, Nicholas D.; Symmonds, Mkael; Dolan, Raymond J.
2013-01-01
Neural encoding of value-based stimuli is suggested to involve representations of summary statistics, including risk and expected value (EV). A more complex, but ecologically more common, context is when multiple risky options are evaluated together. However, it is unknown whether encoding related to option evaluation in these situations involves similar principles. Here we employed fMRI during a task that parametrically manipulated EV and risk in two simultaneously presented lotteries, both of which contained either gains or losses. We found representations of EV in medial prefrontal cortex and anterior insula, an encoding that was dependent on which option was chosen (i.e. chosen and unchosen EV) and whether the choice was over gains or losses. Parietal activity reflected whether the riskier or surer option was selected, whilst activity in a network of regions that also included parietal cortex reflected both combined risk and difference in risk for the two options. Our findings provide support for the idea that summary statistics underpin a representation of value-based stimuli, and further that these summary statistics undergo distinct forms of encoding. PMID:23684860
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Zelt, R.B.; Jordan, P.R.
1993-01-01
Among the first activities undertaken in each National Water-Quality Assessment (NAWQA) program study-unit investigation are compilation, screening, and statistical summary of available data concerning recent, general water-quality conditions in the study unit. This report (1) identifies which of the existing water-quality data are suitable for characterizing general conditions in a nationally consistent manner and (2) describes, to the extent possible, recent, general water-quality conditions in the Central Nebraska Basins. The study unit con- sists of the area drained by the Platte River between the confluence of the North Platte and South Platte Rivers near North Platte downstream to its confluence with the Missouri River south of Omaha. The report includes (1) a description of the sources and characteristics of water-quality data that are available, (2) a description of the approach used for screening data to identify a subset of the data suitable for summary and comparisons, (3) a presen- tation of the results of statistical and graphical summaries of recent, general water-quality con- ditions, and (4) comparisons of recent, general water-quality conditions to established national water-quality criteria, where applicable. Stream- and lake-water data are summarized for selected sampling sites, and data are summarized by major subunits of the study unit (the Sandhills, Loess Hills, Glaciated Area, and Platte Valley subunits) for streambed-sediment, fish-tissue, aquatic- ecological, and ground-water data. The summaries focus on the central tendencies and typical variation in the data and use nonparametric statistics such as frequencies and percentile values.
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Benner, Christian; Havulinna, Aki S; Järvelin, Marjo-Riitta; Salomaa, Veikko; Ripatti, Samuli; Pirinen, Matti
2017-10-05
During the past few years, various novel statistical methods have been developed for fine-mapping with the use of summary statistics from genome-wide association studies (GWASs). Although these approaches require information about the linkage disequilibrium (LD) between variants, there has not been a comprehensive evaluation of how estimation of the LD structure from reference genotype panels performs in comparison with that from the original individual-level GWAS data. Using population genotype data from Finland and the UK Biobank, we show here that a reference panel of 1,000 individuals from the target population is adequate for a GWAS cohort of up to 10,000 individuals, whereas smaller panels, such as those from the 1000 Genomes Project, should be avoided. We also show, both theoretically and empirically, that the size of the reference panel needs to scale with the GWAS sample size; this has important consequences for the application of these methods in ongoing GWAS meta-analyses and large biobank studies. We conclude by providing software tools and by recommending practices for sharing LD information to more efficiently exploit summary statistics in genetics research. Copyright © 2017 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.
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Statistical Literacy: Data Tell a Story
ERIC Educational Resources Information Center
Sole, Marla A.
2016-01-01
Every day, students collect, organize, and analyze data to make decisions. In this data-driven world, people need to assess how much trust they can place in summary statistics. The results of every survey and the safety of every drug that undergoes a clinical trial depend on the correct application of appropriate statistics. Recognizing the…
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A statistical approach to instrument calibration
Robert R. Ziemer; David Strauss
1978-01-01
Summary - It has been found that two instruments will yield different numerical values when used to measure identical points. A statistical approach is presented that can be used to approximate the error associated with the calibration of instruments. Included are standard statistical tests that can be used to determine if a number of successive calibrations of the...
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Miami-Dade County Public Schools Statistical Abstract 2006-2007
ERIC Educational Resources Information Center
Research Services, Miami-Dade County Public Schools, 2007
2007-01-01
The purpose of this document is to present, in summary fashion, statistical information on the status of public education in Miami-Dade County. Information is provided in the areas of organization, educational programs and services, achievement, and other outcomes of schooling. Also included are multi-year statistics on student population,…
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Miami-Dade County Public Schools Statistical Abstract 2005-2006
ERIC Educational Resources Information Center
Research Services, Miami-Dade County Public Schools, 2006
2006-01-01
The purpose of this document is to present, in summary fashion, statistical information on the status of public education in Miami-Dade County. Information is provided in the areas of organization, educational programs and services, achievement, and other outcomes of schooling. Also included are multi-year statistics on student population,…
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Miami-Dade County Public Schools Statistical Abstract 2004-2005
ERIC Educational Resources Information Center
Research Services, Miami-Dade County Public Schools, 2005
2005-01-01
The purpose of this document is to present, in summary fashion, statistical information on the status of public education in Miami-Dade County. Information is provided in the areas of organization, educational programs and services, achievement, and other outcomes of schooling. Also included are multi-year statistics on student population,…
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Miami-Dade County Public Schools Statistical Abstract 2007-2008
ERIC Educational Resources Information Center
Research Services, Miami-Dade County Public Schools, 2008
2008-01-01
The purpose of this document is to present, in summary fashion, statistical information on the status of public education in Miami-Dade County. Information is provided in the areas of organization, educational programs and services, achievement, and other outcomes of schooling. Also included are multi-year statistics on student population,…
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Improving Statistics Education through Simulations: The Case of the Sampling Distribution.
ERIC Educational Resources Information Center
Earley, Mark A.
This paper presents a summary of action research investigating statistics students' understandings of the sampling distribution of the mean. With four sections of an introductory Statistics in Education course (n=98 students), a computer simulation activity (R. delMas, J. Garfield, and B. Chance, 1999) was implemented and evaluated to show…
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Metaplot: a novel stata graph for assessing heterogeneity at a glance.
Poorolajal, J; Mahmoodi, M; Majdzadeh, R; Fotouhi, A
2010-01-01
Heterogeneity is usually a major concern in meta-analysis. Although there are some statistical approaches for assessing variability across studies, here we present a new approach to heterogeneity using "MetaPlot" that investigate the influence of a single study on the overall heterogeneity. MetaPlot is a two-way (x, y) graph, which can be considered as a complementary graphical approach for testing heterogeneity. This method shows graphically as well as numerically the results of an influence analysis, in which Higgins' I(2) statistic with 95% (Confidence interval) CI are computed omitting one study in each turn and then are plotted against reciprocal of standard error (1/SE) or "precision". In this graph, "1/SE" lies on x axis and "I(2) results" lies on y axe. Having a first glance at MetaPlot, one can predict to what extent omission of a single study may influence the overall heterogeneity. The precision on x-axis enables us to distinguish the size of each trial. The graph describes I(2) statistic with 95% CI graphically as well as numerically in one view for prompt comparison. It is possible to implement MetaPlot for meta-analysis of different types of outcome data and summary measures. This method presents a simple graphical approach to identify an outlier and its effect on overall heterogeneity at a glance. We wish to suggest MetaPlot to Stata experts to prepare its module for the software.
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Metaplot: A Novel Stata Graph for Assessing Heterogeneity at a Glance
Poorolajal, J; Mahmoodi, M; Majdzadeh, R; Fotouhi, A
2010-01-01
Background: Heterogeneity is usually a major concern in meta-analysis. Although there are some statistical approaches for assessing variability across studies, here we present a new approach to heterogeneity using “MetaPlot” that investigate the influence of a single study on the overall heterogeneity. Methods: MetaPlot is a two-way (x, y) graph, which can be considered as a complementary graphical approach for testing heterogeneity. This method shows graphically as well as numerically the results of an influence analysis, in which Higgins’ I2 statistic with 95% (Confidence interval) CI are computed omitting one study in each turn and then are plotted against reciprocal of standard error (1/SE) or “precision”. In this graph, “1/SE” lies on x axis and “I2 results” lies on y axe. Results: Having a first glance at MetaPlot, one can predict to what extent omission of a single study may influence the overall heterogeneity. The precision on x-axis enables us to distinguish the size of each trial. The graph describes I2 statistic with 95% CI graphically as well as numerically in one view for prompt comparison. It is possible to implement MetaPlot for meta-analysis of different types of outcome data and summary measures. Conclusion: This method presents a simple graphical approach to identify an outlier and its effect on overall heterogeneity at a glance. We wish to suggest MetaPlot to Stata experts to prepare its module for the software. PMID:23113013
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Federal Register 2010, 2011, 2012, 2013, 2014
2012-03-23
... Statistical Area 630 in the Gulf of Alaska AGENCY: National Marine Fisheries Service (NMFS), National Oceanic.... SUMMARY: NMFS is opening directed fishing for pollock in Statistical Area 630 of the Gulf of Alaska (GOA... catch of pollock in Statistical Area 630 of the GOA. DATES: Effective 1200 hrs, Alaska local time (A.l.t...
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Federal Register 2010, 2011, 2012, 2013, 2014
2013-03-25
... Statistical Area 630 in the Gulf of Alaska AGENCY: National Marine Fisheries Service (NMFS), National Oceanic.... SUMMARY: NMFS is opening directed fishing for pollock in Statistical Area 630 of the Gulf of Alaska (GOA... Statistical Area 630 of the GOA. DATES: Effective 1200 hrs, Alaska local time (A.l.t.), March 22, 2013...
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Federal Register 2010, 2011, 2012, 2013, 2014
2011-03-10
... Statistical Area 630 in the Gulf of Alaska AGENCY: National Marine Fisheries Service (NMFS), National Oceanic.... SUMMARY: NMFS is opening directed fishing for pollock in Statistical Area 630 of the Gulf of Alaska (GOA... pollock in Statistical Area 630 of the GOA. DATES: Effective 1200 hrs, Alaska local time (A.l.t.), March 7...
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Energy Statistics : A Supplement to the Summary of National Transportation Statistics
DOT National Transportation Integrated Search
1973-09-01
This annual report is a compendium of selected time-series data describing the transportation, production, processing, and consumption of energy. The report is divided into three main sections. The first, entitled Energy Transport, contains such item...
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Statistical and operational summaries
NASA Technical Reports Server (NTRS)
Disalvo, J.
1972-01-01
Statistical progress indicator forms are presented on the financial management of the research allocations. Promotional activities, conference participants, and services are tabulated. The staffing and activity levels are also discussed, as well as the fee schedule revision and the standard interest profile offerings.
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PERFORMANCE OF TRICKLING FILTER PLANTS: RELIABILITY, STABILITY, VARIABILITY
Effluent quality variability from trickling filters was examined in this study by statistically analyzing daily effluent BOD5 and suspended solids data from 11 treatment plants. Summary statistics (mean, standard deviation, etc.) were examined to determine the general characteris...
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Energy Statistics : A Supplement to the Summary of Transportation Statistics
DOT National Transportation Integrated Search
1974-08-01
This annual report is a compendium of selected time-series data describing the transportation, production, processing, and consumption of energy. The report is divided into three main sections. The first, entitled Energy Transport, contains such item...
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Statistical complexity without explicit reference to underlying probabilities
NASA Astrophysics Data System (ADS)
Pennini, F.; Plastino, A.
2018-06-01
We show that extremely simple systems of a not too large number of particles can be simultaneously thermally stable and complex. To such an end, we extend the statistical complexity's notion to simple configurations of non-interacting particles, without appeal to probabilities, and discuss configurational properties.
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Calendar methods of fertility regulation: a rule of thumb.
Colombo, B; Scarpa, B
1996-01-01
"[Many] illiterate women, particularly in the third world, find [it] difficult to apply usual calendar methods for the regulation of fertility. Some of them are even unable to make simple subtractions. In this paper we are therefore trying to evaluate the applicability and the efficiency of an extremely simple rule which entails only [the ability to count] a number of days, and always the same way." (SUMMARY IN ITA) excerpt
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An Introductory Summary of Various Effect Size Choices.
ERIC Educational Resources Information Center
Cromwell, Susan
This paper provides a tutorial summary of some of the many effect size choices so that members of the Southwest Educational Research Association would be better able to follow the recommendations of the American Psychological Association (APA) publication manual, the APA Task Force on Statistical Inference, and the publication requirements of some…
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Certificates Awarded by Oregon's Degree Granting Colleges and Universities, 1993-94.
ERIC Educational Resources Information Center
Oregon State Dept. of Education, Salem. Office of Educational Policy and Planning.
This document presents statistical data in summary form on the certificates awarded by institutions of higher education in Oregon. These data were obtained from a completions survey, part of the national Integrated Postsecondary Education Data System (IPEDS). Summary tables are arranged by institution and by program area, followed by tables…
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Degrees Awarded by Oregon's Degree-Granting Colleges and Universities, 1993-94.
ERIC Educational Resources Information Center
Oregon State Dept. of Education, Salem. Office of Educational Policy and Planning.
This document presents statistical data in summary form on the associate, Bachelor's, Master's, doctoral, and first professional degrees awarded by institutions of higher education in Oregon. These data were obtained from a completions survey which is part of the national Integrated Postsecondary Education Data System (IPEDS). Summary tables are…
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SOCR Analyses – an Instructional Java Web-based Statistical Analysis Toolkit
Chu, Annie; Cui, Jenny; Dinov, Ivo D.
2011-01-01
The Statistical Online Computational Resource (SOCR) designs web-based tools for educational use in a variety of undergraduate courses (Dinov 2006). Several studies have demonstrated that these resources significantly improve students' motivation and learning experiences (Dinov et al. 2008). SOCR Analyses is a new component that concentrates on data modeling and analysis using parametric and non-parametric techniques supported with graphical model diagnostics. Currently implemented analyses include commonly used models in undergraduate statistics courses like linear models (Simple Linear Regression, Multiple Linear Regression, One-Way and Two-Way ANOVA). In addition, we implemented tests for sample comparisons, such as t-test in the parametric category; and Wilcoxon rank sum test, Kruskal-Wallis test, Friedman's test, in the non-parametric category. SOCR Analyses also include several hypothesis test models, such as Contingency tables, Friedman's test and Fisher's exact test. The code itself is open source (http://socr.googlecode.com/), hoping to contribute to the efforts of the statistical computing community. The code includes functionality for each specific analysis model and it has general utilities that can be applied in various statistical computing tasks. For example, concrete methods with API (Application Programming Interface) have been implemented in statistical summary, least square solutions of general linear models, rank calculations, etc. HTML interfaces, tutorials, source code, activities, and data are freely available via the web (www.SOCR.ucla.edu). Code examples for developers and demos for educators are provided on the SOCR Wiki website. In this article, the pedagogical utilization of the SOCR Analyses is discussed, as well as the underlying design framework. As the SOCR project is on-going and more functions and tools are being added to it, these resources are constantly improved. The reader is strongly encouraged to check the SOCR site for most updated information and newly added models. PMID:21546994
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STATISTICAL SUMMARY: EMAP-ESTUARIES LOUISIANIAN PROVINCE - 1993
This statistical summmary of the ecological condition of the estuarine resources is based on the results of the 1993 Louisianian Province Demonstration Project. The population of estuarine resources with the Louisianian Province consists of all estuarine areas located along the c...
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1999 Iowa crash facts : a summary of motor vehicle crash statistics on Iowa roadways
DOT National Transportation Integrated Search
1999-01-01
All information concerning Iowa traffic crashes was taken from report forms : provided by investigating officers and drivers involved in crashes. : All statistics are gathered and calculated by the Iowa Department of Transportations Office of Driv...
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Inventory of Electric Utility Power Plants in the United States
2002-01-01
Final issue of this report. Provides detailed statistics on existing generating units operated by electric utilities as of December 31, 2000, and certain summary statistics about new generators planned for operation by electric utilities during the next 5 years.
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75 FR 57440 - Performance Review Board Membership
Federal Register 2010, 2011, 2012, 2013, 2014
2010-09-21
... DEPARTMENT OF COMMERCE Performance Review Board Membership AGENCY: Economics and Statistics Administration, Commerce. ACTION: Notice. SUMMARY: Below is a listing of individuals who are eligible to serve on the Performance Review Board in accordance with the Economics and Statistics Administration's Senior...
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76 FR 57712 - Performance Review Board Membership
Federal Register 2010, 2011, 2012, 2013, 2014
2011-09-16
... DEPARTMENT OF COMMERCE Performance Review Board Membership AGENCY: Economics and Statistics Administration, Commerce. ACTION: Notice. SUMMARY: Below is a listing of individuals who are eligible to serve on the Performance Review Board (PRB) in accordance with the Economics and Statistics Administration's...
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Federal Register 2010, 2011, 2012, 2013, 2014
2010-04-23
... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration Proposed Information Collection; Comment Request; Marine Recreational Fisheries Statistics Survey AGENCY: National Oceanic and Atmospheric Administration (NOAA), Commerce. ACTION: Notice. SUMMARY: The Department of Commerce, as part of...
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The MIT/OSO 7 catalog of X-ray sources - Intensities, spectra, and long-term variability
NASA Technical Reports Server (NTRS)
Markert, T. H.; Laird, F. N.; Clark, G. W.; Hearn, D. R.; Sprott, G. F.; Li, F. K.; Bradt, H. V.; Lewin, W. H. G.; Schnopper, H. W.; Winkler, P. F.
1979-01-01
This paper is a summary of the observations of the cosmic X-ray sky performed by the MIT 1-40-keV X-ray detectors on OSO 7 between October 1971 and May 1973. Specifically, mean intensities or upper limits of all third Uhuru or OSO 7 cataloged sources (185 sources) in the 3-10-keV range are computed. For those sources for which a statistically significant (greater than 20) intensity was found in the 3-10-keV band (138 sources), further intensity determinations were made in the 1-15-keV, 1-6-keV, and 15-40-keV energy bands. Graphs and other simple techniques are provided to aid the user in converting the observed counting rates to convenient units and in determining spectral parameters. Long-term light curves (counting rates in one or more energy bands as a function of time) are plotted for 86 of the brighter sources.
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Effect of preoperative suggestion on postoperative gastrointestinal motility.
Disbrow, E A; Bennett, H L; Owings, J T
1993-01-01
Autonomic behavior is subject to direct suggestion. We found that patients undergoing major operations benefit more from instruction than from information and reassurance. We compared the return of intestinal function after intra-abdominal operations in 2 groups of patients: the suggestion group received specific instructions for the early return of gastrointestinal motility, and the control group received an equal-length interview offering reassurance and nonspecific instructions. The suggestion group had a significantly shorter average time to the return of intestinal motility, 2.6 versus 4.1 days. Time to discharge was 6.5 versus 8.1 days. Covariates including duration of operation, amount of intraoperative bowel manipulation, and amount of postoperative narcotics were also examined using the statistical model analysis of covariance. An average savings of $1,200 per patient resulted from this simple 5-minute intervention. In summary, the use of specific physiologically active suggestions given preoperatively in a beleivable manner can reduce the morbidity associated with an intra-abdominal operation by reducing the duration of ileus. PMID:8342264
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Lakatos, Eszter; Salehi-Reyhani, Ali; Barclay, Michael; Stumpf, Michael P H; Klug, David R
2017-01-01
We determine p53 protein abundances and cell to cell variation in two human cancer cell lines with single cell resolution, and show that the fractional width of the distributions is the same in both cases despite a large difference in average protein copy number. We developed a computational framework to identify dominant mechanisms controlling the variation of protein abundance in a simple model of gene expression from the summary statistics of single cell steady state protein expression distributions. Our results, based on single cell data analysed in a Bayesian framework, lends strong support to a model in which variation in the basal p53 protein abundance may be best explained by variations in the rate of p53 protein degradation. This is supported by measurements of the relative average levels of mRNA which are very similar despite large variation in the level of protein.
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Measuring multivariate association and beyond
Josse, Julie; Holmes, Susan
2017-01-01
Simple correlation coefficients between two variables have been generalized to measure association between two matrices in many ways. Coefficients such as the RV coefficient, the distance covariance (dCov) coefficient and kernel based coefficients are being used by different research communities. Scientists use these coefficients to test whether two random vectors are linked. Once it has been ascertained that there is such association through testing, then a next step, often ignored, is to explore and uncover the association’s underlying patterns. This article provides a survey of various measures of dependence between random vectors and tests of independence and emphasizes the connections and differences between the various approaches. After providing definitions of the coefficients and associated tests, we present the recent improvements that enhance their statistical properties and ease of interpretation. We summarize multi-table approaches and provide scenarii where the indices can provide useful summaries of heterogeneous multi-block data. We illustrate these different strategies on several examples of real data and suggest directions for future research. PMID:29081877
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A Conceptual Framework for Pharmacodynamic Genome-wide Association Studies in Pharmacogenomics
Wu, Rongling; Tong, Chunfa; Wang, Zhong; Mauger, David; Tantisira, Kelan; Szefler, Stanley J.; Chinchilli, Vernon M.; Israel, Elliot
2013-01-01
Summary Genome-wide association studies (GWAS) have emerged as a powerful tool to identify loci that affect drug response or susceptibility to adverse drug reactions. However, current GWAS based on a simple analysis of associations between genotype and phenotype ignores the biochemical reactions of drug response, thus limiting the scope of inference about its genetic architecture. To facilitate the inference of GWAS in pharmacogenomics, we sought to undertake the mathematical integration of the pharmacodynamic process of drug reactions through computational models. By estimating and testing the genetic control of pharmacodynamic and pharmacokinetic parameters, this mechanistic approach does not only enhance the biological and clinical relevance of significant genetic associations, but also improve the statistical power and robustness of gene detection. This report discusses the general principle and development of pharmacodynamics-based GWAS, highlights the practical use of this approach in addressing various pharmacogenomic problems, and suggests that this approach will be an important method to study the genetic architecture of drug responses or reactions. PMID:21920452
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The Higher Education System in Israel: Statistical Abstract and Analysis.
ERIC Educational Resources Information Center
Herskovic, Shlomo
This edition of a statistical abstract published every few years on the higher education system in Israel presents the most recent data available through 1990-91. The data were gathered through the cooperation of the Central Bureau of Statistics and institutions of higher education. Chapter 1 presents a summary of principal findings covering the…
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2016-02-02
23 Descriptive Statistics for Enlisted Service Applicants and Accessions...33 Summary Statistics for Applicants and Accessions for Enlisted Service ..................................... 36 Applicants and...utilization among Soldiers screened using TAPAS. Section 2 of this report includes the descriptive statistics AMSARA compiles and publishes
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2017-03-01
53 ix LIST OF TABLES Table 1. Descriptive Statistics for Control Variables by... Statistics for Control Variables by Gender (Random Subsample with Complete Survey) ............................................................30 Table...empirical analysis. Chapter IV describes the summary statistics and results. Finally, Chapter V offers concluding thoughts, study limitations, and
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2011 statistical abstract of the United States
Krisanda, Joseph M.
2011-01-01
The Statistical Abstract of the United States, published since 1878, is the authoritative and comprehensive summary of statistics on the social, political, and economic organization of the United States.Use the Abstract as a convenient volume for statistical reference, and as a guide to sources of more information both in print and on the Web.Sources of data include the Census Bureau, Bureau of Labor Statistics, Bureau of Economic Analysis, and many other Federal agencies and private organizations.
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Liu, Dungang; Liu, Regina; Xie, Minge
2014-01-01
Meta-analysis has been widely used to synthesize evidence from multiple studies for common hypotheses or parameters of interest. However, it has not yet been fully developed for incorporating heterogeneous studies, which arise often in applications due to different study designs, populations or outcomes. For heterogeneous studies, the parameter of interest may not be estimable for certain studies, and in such a case, these studies are typically excluded from conventional meta-analysis. The exclusion of part of the studies can lead to a non-negligible loss of information. This paper introduces a metaanalysis for heterogeneous studies by combining the confidence density functions derived from the summary statistics of individual studies, hence referred to as the CD approach. It includes all the studies in the analysis and makes use of all information, direct as well as indirect. Under a general likelihood inference framework, this new approach is shown to have several desirable properties, including: i) it is asymptotically as efficient as the maximum likelihood approach using individual participant data (IPD) from all studies; ii) unlike the IPD analysis, it suffices to use summary statistics to carry out the CD approach. Individual-level data are not required; and iii) it is robust against misspecification of the working covariance structure of the parameter estimates. Besides its own theoretical significance, the last property also substantially broadens the applicability of the CD approach. All the properties of the CD approach are further confirmed by data simulated from a randomized clinical trials setting as well as by real data on aircraft landing performance. Overall, one obtains an unifying approach for combining summary statistics, subsuming many of the existing meta-analysis methods as special cases. PMID:26190875
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Improved Design of Tunnel Supports : Executive Summary
DOT National Transportation Integrated Search
1979-12-01
This report focuses on improvement of design methodologies related to the ground-structure interaction in tunneling. The design methods range from simple analytical and empirical methods to sophisticated finite element techniques as well as an evalua...
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Closed flume inlet efficiency : [summary].
DOT National Transportation Integrated Search
2014-04-01
The storm drain is an inconspicuous but critical : part of the roadway, especially in Florida. Drains : look deceptively simple, but they must capture : water as efficiently as possible. To help assure : the performance of storm drains, the Florida :...
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A simple rain attenuation model for earth-space radio links operating at 10-35 GHz
NASA Technical Reports Server (NTRS)
Stutzman, W. L.; Yon, K. M.
1986-01-01
The simple attenuation model has been improved from an earlier version and now includes the effect of wave polarization. The model is for the prediction of rain attenuation statistics on earth-space communication links operating in the 10-35 GHz band. Simple calculations produce attenuation values as a function of average rain rate. These together with rain rate statistics (either measured or predicted) can be used to predict annual rain attenuation statistics. In this paper model predictions are compared to measured data from a data base of 62 experiments performed in the U.S., Europe, and Japan. Comparisons are also made to predictions from other models.
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Zheng, Jie; Rodriguez, Santiago; Laurin, Charles; Baird, Denis; Trela-Larsen, Lea; Erzurumluoglu, Mesut A; Zheng, Yi; White, Jon; Giambartolomei, Claudia; Zabaneh, Delilah; Morris, Richard; Kumari, Meena; Casas, Juan P; Hingorani, Aroon D; Evans, David M; Gaunt, Tom R; Day, Ian N M
2017-01-01
Fine mapping is a widely used approach for identifying the causal variant(s) at disease-associated loci. Standard methods (e.g. multiple regression) require individual level genotypes. Recent fine mapping methods using summary-level data require the pairwise correlation coefficients ([Formula: see text]) of the variants. However, haplotypes rather than pairwise [Formula: see text], are the true biological representation of linkage disequilibrium (LD) among multiple loci. In this article, we present an empirical iterative method, HAPlotype Regional Association analysis Program (HAPRAP), that enables fine mapping using summary statistics and haplotype information from an individual-level reference panel. Simulations with individual-level genotypes show that the results of HAPRAP and multiple regression are highly consistent. In simulation with summary-level data, we demonstrate that HAPRAP is less sensitive to poor LD estimates. In a parametric simulation using Genetic Investigation of ANthropometric Traits height data, HAPRAP performs well with a small training sample size (N < 2000) while other methods become suboptimal. Moreover, HAPRAP's performance is not affected substantially by single nucleotide polymorphisms (SNPs) with low minor allele frequencies. We applied the method to existing quantitative trait and binary outcome meta-analyses (human height, QTc interval and gallbladder disease); all previous reported association signals were replicated and two additional variants were independently associated with human height. Due to the growing availability of summary level data, the value of HAPRAP is likely to increase markedly for future analyses (e.g. functional prediction and identification of instruments for Mendelian randomization). The HAPRAP package and documentation are available at http://apps.biocompute.org.uk/haprap/ CONTACT: : jie.zheng@bristol.ac.uk or tom.gaunt@bristol.ac.ukSupplementary information: Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press.
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Energy Statistics : A Supplement to the Summary of National Transportation Statistics
DOT National Transportation Integrated Search
1976-08-01
This report is a compendium of selected time-series data describing the transportation, production, processing, and consumption of energy. It contains such items as the revenues and expenses of oil pipeline companies, number and capacities of U.S. ta...
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Energy Statistics : A Supplement to the Summary of National Transportation Statistics
DOT National Transportation Integrated Search
1975-08-01
This report is a compendium of selected time-series data describing the transportation, production, processing, and consumption of energy. It discusses such items as the revenues and expenses of oil pipeline companies, number and capacities of U.S. t...
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Gene- and pathway-based association tests for multiple traits with GWAS summary statistics.
Kwak, Il-Youp; Pan, Wei
2017-01-01
To identify novel genetic variants associated with complex traits and to shed new insights on underlying biology, in addition to the most popular single SNP-single trait association analysis, it would be useful to explore multiple correlated (intermediate) traits at the gene- or pathway-level by mining existing single GWAS or meta-analyzed GWAS data. For this purpose, we present an adaptive gene-based test and a pathway-based test for association analysis of multiple traits with GWAS summary statistics. The proposed tests are adaptive at both the SNP- and trait-levels; that is, they account for possibly varying association patterns (e.g. signal sparsity levels) across SNPs and traits, thus maintaining high power across a wide range of situations. Furthermore, the proposed methods are general: they can be applied to mixed types of traits, and to Z-statistics or P-values as summary statistics obtained from either a single GWAS or a meta-analysis of multiple GWAS. Our numerical studies with simulated and real data demonstrated the promising performance of the proposed methods. The methods are implemented in R package aSPU, freely and publicly available at: https://cran.r-project.org/web/packages/aSPU/ CONTACT: weip@biostat.umn.eduSupplementary information: Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.
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Petroleum supply monthly, June 1999, with data for April 1999
DOE Office of Scientific and Technical Information (OSTI.GOV)
NONE
Data presented in the Petroleum Supply Monthly (PSM) describe the supply and disposition of petroleum products in the US and major US geographic regions. The data series describe production, imports and exports, inter-Petroleum Administration for Defense (PAD) District movements, and inventories by the primary suppliers of petroleum products in the US (50 States and the District of Columbia). The reporting universe includes those petroleum sectors in primary supply. Included are: petroleum refiners, motor gasoline blenders, operators of natural gas processing plants and fractionators, inter-PAD transporters, importers, and major inventory holders of petroleum products and crude oil. When aggregated, the datamore » reported by these sectors approximately represent the consumption of petroleum products in the US. Data presented in the PSM are divided into two sections: Summary Statistics and Detailed Statistics. The tables and figures in the Summary Statistics section of the PSM present a time series of selected petroleum data on a US level. The Detailed Statistics tables of the PSM present statistics for the most current month available as well as year-to-date. 16 figs., 66 tabs.« less
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Petroleum supply monthly, February 1999, with data for December 1998
DOE Office of Scientific and Technical Information (OSTI.GOV)
NONE
Data presented in the Petroleum Supply Monthly (PSM) describes the supply and disposition of petroleum products in the United States and major US geographic regions. The data series describe production, imports and exports, inter-Petroleum Administration for Defense (PAD) District movements, and inventories by the primary suppliers of petroleum products in the United States (50 States and the District of Columbia). The reporting universe includes those petroleum sectors in primary supply. Included are: petroleum refiners, motor gasoline blenders, operators of natural gas processing plants and fractionators, inter-PAD transporters, importers, and major inventory holders of petroleum products and crude oil. When aggregated,more » the data reported by these sectors approximately represent the consumption of petroleum products in the United States. Data presented in the PSM are divided into two sections: Summary Statistics and Detailed Statistics. The tables and figures in the Summary Statistics section of the PSM present a time series of selected petroleum data on a US level. The Detailed Statistics tables of the PSM present statistics for the most current month available as well as year-to-date. 16 figs., 66 tabs.« less
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Streamflow characteristics of streams in southeastern Afghanistan
Vining, Kevin C.
2010-01-01
Statistical summaries of streamflow data for all historical streamgaging stations that have available data in the southeastern Afghanistan provinces of Ghazni, Khost, Logar, Paktya, and Wardak, and a portion of Kabul Province are presented in this report. The summaries for each streamgaging station include a station desciption, table of statistics of monthly and annual mean discharges, table of monthly and annual flow duration, table of probability of occurrence of annual high discharges, table of probability of occurrence of annual low discharges, table of annual peak discharge and corresponding gage height for the period of record, and table of monthly and annual mean discharges for the period of record.
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Streamflow characteristics at streamgages in northern Afghanistan and selected locations
Olson, Scott A.; Williams-Sether, Tara
2010-01-01
Statistical summaries of streamflow data for 79 historical streamgages in Northern Afghanistan and other selected historical streamgages are presented in this report. The summaries for each streamgage include (1) station description, (2) graph of the annual mean discharge for the period of record, (3) statistics of monthly and annual mean discharges, (4) monthly and annual flow duration, (5) probability of occurrence of annual high discharges, (6) probability of occurrence of annual low discharges, (7) probability of occurrence of seasonal low discharges, (8) annual peak discharges for the period of record, and (9) monthly and annual mean discharges for the period of record.
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Connectedness DEOCS 4.1 Construct Validity Summary
2017-08-01
Connectedness DEOCS 4.1 Construct Validity Summary DEFENSE EQUAL OPPORTUNITY MANAGEMENT INSTITUTE DIRECTORATE OF...appropriate statistical method to analyze these data. This EFA yielded a single factor solution. Refer to Table 6 for more information . Table 6...top management team perceptions of CEO charisma. Academy of Management Journal, 49(1), 161-174. Assessment to Solutions. (2016). Retrieved from https
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Hierarchical models and bayesian analysis of bird survey information
John R. Sauer; William A. Link; J. Andrew Royle
2005-01-01
Summary of bird survey information is a critical component of conservation activities, but often our summaries rely on statistical methods that do not accommodate the limitations of the information. Prioritization of species requires ranking and analysis of species by magnitude of population trend, but often magnitude of trend is a misleading measure of actual decline...
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The National Evaluation of School Nutrition Programs. Final Report - Executive Summary.
ERIC Educational Resources Information Center
Radzikowski, Jack
This is a summary of the final report of a study (begun in 1979) of the National School Lunch, School Breakfast, and Special Milk Programs. The major objectives of the evaluation were to (1) identify existing information on the school nutrition programs; (2) identify determinants of participation in the programs and develop statistical models for…
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Doctorate Recipients from United States Universities. Summary Report, 1984.
ERIC Educational Resources Information Center
Coyle, Susan L.; Syverson, Peter D.
A statistical and narrative summary of the results of the 1983-1984 Survey of Earned Doctorates is presented. Basic information, such as sex, field, institution, and year of Ph.D., is presented for all of the 31,253 doctorate recipients; complete questionnaire data are included for the 29,713 Ph.D. recipients who responded to the questionnaire,…
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2011 statistical abstract of the United States
Krisanda, Joseph M.
2011-01-01
The Statistical Abstract of the United States, published since 1878, is the authoritative and comprehensive summary of statistics on the social, political, and economic organization of the United States.
Use the Abstract as a convenient volume for statistical reference, and as a guide to sources of more information both in print and on the Web.
Sources of data include the Census Bureau, Bureau of Labor Statistics, Bureau of Economic Analysis, and many other Federal agencies and private organizations.
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Statistics of Private High Schools and Academies, 1919-20. Bulletin, 1922, No. 9
ERIC Educational Resources Information Center
Bonner, H. R.
1922-01-01
The included tables present the statistics of 2,093 private high schools and academies in the continental United States and of 4 such schools in Hawaii and Puerto Rico. Throughout the summary tables the totals for the United States do not include the statistics of these 4 schools in the outlying possessions. No reports from private high schools…
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Revised Perturbation Statistics for the Global Scale Atmospheric Model
NASA Technical Reports Server (NTRS)
Justus, C. G.; Woodrum, A.
1975-01-01
Magnitudes and scales of atmospheric perturbations about the monthly mean for the thermodynamic variables and wind components are presented by month at various latitudes. These perturbation statistics are a revision of the random perturbation data required for the global scale atmospheric model program and are from meteorological rocket network statistical summaries in the 22 to 65 km height range and NASA grenade and pitot tube data summaries in the region up to 90 km. The observed perturbations in the thermodynamic variables were adjusted to make them consistent with constraints required by the perfect gas law and the hydrostatic equation. Vertical scales were evaluated by Buell's depth of pressure system equation and from vertical structure function analysis. Tables of magnitudes and vertical scales are presented for each month at latitude 10, 30, 50, 70, and 90 degrees.
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Chapter 16: Fire and nonnative plants-summary and conclusions
Jane Kapler Smith; Kristin Zouhar; Steve Sutherland; Matthew L. Brooks
2008-01-01
This volume synthesizes scientific information about interactions between fire and nonnative invasive plants in wildlands of the United States. If the subject were clear and simple, this volume would be short; obviously, it is not.
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The Statistical Consulting Center for Astronomy (SCCA)
NASA Technical Reports Server (NTRS)
Akritas, Michael
2001-01-01
The process by which raw astronomical data acquisition is transformed into scientifically meaningful results and interpretation typically involves many statistical steps. Traditional astronomy limits itself to a narrow range of old and familiar statistical methods: means and standard deviations; least-squares methods like chi(sup 2) minimization; and simple nonparametric procedures such as the Kolmogorov-Smirnov tests. These tools are often inadequate for the complex problems and datasets under investigations, and recent years have witnessed an increased usage of maximum-likelihood, survival analysis, multivariate analysis, wavelet and advanced time-series methods. The Statistical Consulting Center for Astronomy (SCCA) assisted astronomers with the use of sophisticated tools, and to match these tools with specific problems. The SCCA operated with two professors of statistics and a professor of astronomy working together. Questions were received by e-mail, and were discussed in detail with the questioner. Summaries of those questions and answers leading to new approaches were posted on the Web (www.state.psu.edu/ mga/SCCA). In addition to serving individual astronomers, the SCCA established a Web site for general use that provides hypertext links to selected on-line public-domain statistical software and services. The StatCodes site (www.astro.psu.edu/statcodes) provides over 200 links in the areas of: Bayesian statistics; censored and truncated data; correlation and regression, density estimation and smoothing, general statistics packages and information; image analysis; interactive Web tools; multivariate analysis; multivariate clustering and classification; nonparametric analysis; software written by astronomers; spatial statistics; statistical distributions; time series analysis; and visualization tools. StatCodes has received a remarkable high and constant hit rate of 250 hits/week (over 10,000/year) since its inception in mid-1997. It is of interest to scientists both within and outside of astronomy. The most popular sections are multivariate techniques, image analysis, and time series analysis. Hundreds of copies of the ASURV, SLOPES and CENS-TAU codes developed by SCCA scientists were also downloaded from the StatCodes site. In addition to formal SCCA duties, SCCA scientists continued a variety of related activities in astrostatistics, including refereeing of statistically oriented papers submitted to the Astrophysical Journal, talks in meetings including Feigelson's talk to science journalists entitled "The reemergence of astrostatistics" at the American Association for the Advancement of Science meeting, and published papers of astrostatistical content.
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Køppe, Simo; Dammeyer, Jesper
2014-09-01
The evolution of developmental psychology has been characterized by the use of different quantitative and qualitative methods and procedures. But how does the use of methods and procedures change over time? This study explores the change and development of statistical methods used in articles published in Child Development from 1930 to 2010. The methods used in every article in the first issue of every volume were categorized into four categories. Until 1980 relatively simple statistical methods were used. During the last 30 years there has been an explosive use of more advanced statistical methods employed. The absence of statistical methods or use of simple methods had been eliminated.
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Statistical energy analysis computer program, user's guide
NASA Technical Reports Server (NTRS)
Trudell, R. W.; Yano, L. I.
1981-01-01
A high frequency random vibration analysis, (statistical energy analysis (SEA) method) is examined. The SEA method accomplishes high frequency prediction of arbitrary structural configurations. A general SEA computer program is described. A summary of SEA theory, example problems of SEA program application, and complete program listing are presented.
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Education Statistics Quarterly, Summer 2002.
ERIC Educational Resources Information Center
Dillow, Sally, Ed.
2002-01-01
This publication provides a comprehensive overview of work done across all parts of the National Center for Education Statistics (NCES). Each issue contains short publications, summaries, and descriptions that cover all NCES publications, data products, and funding opportunities developed over a 3-month period. Each issue also contains a message…
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Education Statistics Quarterly, Spring 2002.
ERIC Educational Resources Information Center
Dillow, Sally, Ed.
2002-01-01
This publication provides a comprehensive overview of work done across all parts of the National Center for Education Statistics (NCES). Each issue contains short publications, summaries, and descriptions that cover all NCES publications, data products, and funding opportunities developed over a 3-month period. Each issue also contains a message…
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A simple method of equine limb force vector analysis and its potential applications
Robinson, Mark A.; Clayton, Hilary M.
2018-01-01
Background Ground reaction forces (GRF) measured during equine gait analysis are typically evaluated by analyzing discrete values obtained from continuous force-time data for the vertical, longitudinal and transverse GRF components. This paper describes a simple, temporo-spatial method of displaying and analyzing sagittal plane GRF vectors. In addition, the application of statistical parametric mapping (SPM) is introduced to analyse differences between contra-lateral fore and hindlimb force-time curves throughout the stance phase. The overall aim of the study was to demonstrate alternative methods of evaluating functional (a)symmetry within horses. Methods GRF and kinematic data were collected from 10 horses trotting over a series of four force plates (120 Hz). The kinematic data were used to determine clean hoof contacts. The stance phase of each hoof was determined using a 50 N threshold. Vertical and longitudinal GRF for each stance phase were plotted both as force-time curves and as force vector diagrams in which vectors originating at the centre of pressure on the force plate were drawn at intervals of 8.3 ms for the duration of stance. Visual evaluation was facilitated by overlay of the vector diagrams for different limbs. Summary vectors representing the magnitude (VecMag) and direction (VecAng) of the mean force over the entire stance phase were superimposed on the force vector diagram. Typical measurements extracted from the force-time curves (peak forces, impulses) were compared with VecMag and VecAng using partial correlation (controlling for speed). Paired samples t-tests (left v. right diagonal pair comparison and high v. low vertical force diagonal pair comparison) were performed on discrete and vector variables using traditional methods and Hotelling’s T2 tests on normalized stance phase data using SPM. Results Evidence from traditional statistical tests suggested that VecMag is more influenced by the vertical force and impulse, whereas VecAng is more influenced by the longitudinal force and impulse. When used to evaluate mean data from the group of ten sound horses, SPM did not identify differences between the left and right contralateral limb pairs or between limb pairs classified according to directional asymmetry. When evaluating a single horse, three periods were identified during which differences in the forces between the left and right forelimbs exceeded the critical threshold (p < .01). Discussion Traditional statistical analysis of 2D GRF peak values, summary vector variables and visual evaluation of force vector diagrams gave harmonious results and both methods identified the same inter-limb asymmetries. As alpha was more tightly controlled using SPM, significance was only found in the individual horse although T2 plots followed the same trends as discrete analysis for the group. Conclusions The techniques of force vector analysis and SPM hold promise for investigations of sidedness and asymmetry in horses. PMID:29492341
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Evaluation of continuity detail for precast prestressed girders : tech summary.
DOT National Transportation Integrated Search
2011-08-01
Building multi-simple span bridges using precast prestressed concrete girders is an easy construction. However, the existence of : expansion joints often leads to a host of problems in their vicinity due to drainage leaks. Furthermore, debris accumul...
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Technology in rural transportation. Simple solution #9, transportation operations optimization
DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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Technology in rural transportation. Simple solution #7, lane drop driver awareness
DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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Technology in rural transportation. Simple solution #8, mobile weather sensors
DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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Technology in rural transportation. Simple solution #4, low cost vehicle detection
DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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Technology in rural transportation. Simple solution #3, coordinated rural transit services
DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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Technology in rural transportation. Simple solution #14, public service weather radio
DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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Technology in rural transportation. Simple solution #2, coordinate addressing system
DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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ECOLOGICAL INDICATORS IN RISK ASSESSMENT WORKSHOP SUMMARY
Ecological indicators can be defined as relatively simple measurements that relay scientific information about complex ecosystems. Such indicators are used to characterize risk in ecological risk assessment (ERA) and to mark progress toward resource management goals. In late 1997...
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ECOLOGICAL INDICATORS IN RISK ASSESSMENT: WORKSHOP SUMMARY
Ecological indicators can be defined as relatively simple measurements that relay scientific information about complex ecosystems. Such indicators are used to characterize risk in ecological risk assessment and to mark progress toward resource management goals. In late 1997 scien...
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Two Paradoxes in Linear Regression Analysis
FENG, Ge; PENG, Jing; TU, Dongke; ZHENG, Julia Z.; FENG, Changyong
2016-01-01
Summary Regression is one of the favorite tools in applied statistics. However, misuse and misinterpretation of results from regression analysis are common in biomedical research. In this paper we use statistical theory and simulation studies to clarify some paradoxes around this popular statistical method. In particular, we show that a widely used model selection procedure employed in many publications in top medical journals is wrong. Formal procedures based on solid statistical theory should be used in model selection. PMID:28638214
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Statistics for NAEG: past efforts, new results, and future plans
DOE Office of Scientific and Technical Information (OSTI.GOV)
Gilbert, R.O.; Simpson, J.C.; Kinnison, R.R.
A brief review of Nevada Applied Ecology Group (NAEG) objectives is followed by a summary of past statistical analyses conducted by Pacific Northwest Laboratory for the NAEG. Estimates of spatial pattern of radionuclides and other statistical analyses at NS's 201, 219 and 221 are reviewed as background for new analyses presented in this paper. Suggested NAEG activities and statistical analyses needed for the projected termination date of NAEG studies in March 1986 are given.
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Survey of statistical techniques used in validation studies of air pollution prediction models
DOE Office of Scientific and Technical Information (OSTI.GOV)
Bornstein, R D; Anderson, S F
1979-03-01
Statistical techniques used by meteorologists to validate predictions made by air pollution models are surveyed. Techniques are divided into the following three groups: graphical, tabular, and summary statistics. Some of the practical problems associated with verification are also discussed. Characteristics desired in any validation program are listed and a suggested combination of techniques that possesses many of these characteristics is presented.
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Compendium of Methods for Applying Measured Data to Vibration and Acoustic Problems
1985-10-01
statistical energy analysis , finite element models, transfer function...Procedures for the Modal Analysis Method .............................................. 8-22 8.4 Summary of the Procedures for the Statistical Energy Analysis Method... statistical energy analysis . 8-1 • o + . . i... "_+,A" L + "+..• •+A ’! i, + +.+ +• o.+ -ore -+. • -..- , .%..% ". • 2 -".-2- ;.-.’, . o . It is helpful
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In vivo Comet assay--statistical analysis and power calculations of mice testicular cells.
Hansen, Merete Kjær; Sharma, Anoop Kumar; Dybdahl, Marianne; Boberg, Julie; Kulahci, Murat
2014-11-01
The in vivo Comet assay is a sensitive method for evaluating DNA damage. A recurrent concern is how to analyze the data appropriately and efficiently. A popular approach is to summarize the raw data into a summary statistic prior to the statistical analysis. However, consensus on which summary statistic to use has yet to be reached. Another important consideration concerns the assessment of proper sample sizes in the design of Comet assay studies. This study aims to identify a statistic suitably summarizing the % tail DNA of mice testicular samples in Comet assay studies. A second aim is to provide curves for this statistic outlining the number of animals and gels to use. The current study was based on 11 compounds administered via oral gavage in three doses to male mice: CAS no. 110-26-9, CAS no. 512-56-1, CAS no. 111873-33-7, CAS no. 79-94-7, CAS no. 115-96-8, CAS no. 598-55-0, CAS no. 636-97-5, CAS no. 85-28-9, CAS no. 13674-87-8, CAS no. 43100-38-5 and CAS no. 60965-26-6. Testicular cells were examined using the alkaline version of the Comet assay and the DNA damage was quantified as % tail DNA using a fully automatic scoring system. From the raw data 23 summary statistics were examined. A linear mixed-effects model was fitted to the summarized data and the estimated variance components were used to generate power curves as a function of sample size. The statistic that most appropriately summarized the within-sample distributions was the median of the log-transformed data, as it most consistently conformed to the assumptions of the statistical model. Power curves for 1.5-, 2-, and 2.5-fold changes of the highest dose group compared to the control group when 50 and 100 cells were scored per gel are provided to aid in the design of future Comet assay studies on testicular cells. Copyright © 2014 Elsevier B.V. All rights reserved.
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Larson, Nicholas B; McDonnell, Shannon; Cannon Albright, Lisa; Teerlink, Craig; Stanford, Janet; Ostrander, Elaine A; Isaacs, William B; Xu, Jianfeng; Cooney, Kathleen A; Lange, Ethan; Schleutker, Johanna; Carpten, John D; Powell, Isaac; Bailey-Wilson, Joan E; Cussenot, Olivier; Cancel-Tassin, Geraldine; Giles, Graham G; MacInnis, Robert J; Maier, Christiane; Whittemore, Alice S; Hsieh, Chih-Lin; Wiklund, Fredrik; Catalona, William J; Foulkes, William; Mandal, Diptasri; Eeles, Rosalind; Kote-Jarai, Zsofia; Ackerman, Michael J; Olson, Timothy M; Klein, Christopher J; Thibodeau, Stephen N; Schaid, Daniel J
2017-05-01
Next-generation sequencing technologies have afforded unprecedented characterization of low-frequency and rare genetic variation. Due to low power for single-variant testing, aggregative methods are commonly used to combine observed rare variation within a single gene. Causal variation may also aggregate across multiple genes within relevant biomolecular pathways. Kernel-machine regression and adaptive testing methods for aggregative rare-variant association testing have been demonstrated to be powerful approaches for pathway-level analysis, although these methods tend to be computationally intensive at high-variant dimensionality and require access to complete data. An additional analytical issue in scans of large pathway definition sets is multiple testing correction. Gene set definitions may exhibit substantial genic overlap, and the impact of the resultant correlation in test statistics on Type I error rate control for large agnostic gene set scans has not been fully explored. Herein, we first outline a statistical strategy for aggregative rare-variant analysis using component gene-level linear kernel score test summary statistics as well as derive simple estimators of the effective number of tests for family-wise error rate control. We then conduct extensive simulation studies to characterize the behavior of our approach relative to direct application of kernel and adaptive methods under a variety of conditions. We also apply our method to two case-control studies, respectively, evaluating rare variation in hereditary prostate cancer and schizophrenia. Finally, we provide open-source R code for public use to facilitate easy application of our methods to existing rare-variant analysis results. © 2017 WILEY PERIODICALS, INC.
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Statistical Supplement to the Annual Report, Fiscal Year 1987.
ERIC Educational Resources Information Center
Texas Coll. and Univ. System, Austin. Coordinating Board.
This report offers statistical data for fiscal year 1987 on student enrollments, faculty, semester credit hours, physical facilities appropriations, and state loan and grant programs for Texas institutions of higher education. The following enrollment data are presented: 5-year (1982-86) summaries of headcount for public senior colleges and…
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76 FR 28730 - Notice of Intent To Suspend the Agricultural Labor Survey and Farm Labor Reports
Federal Register 2010, 2011, 2012, 2013, 2014
2011-05-18
... DEPARTMENT OF AGRICULTURE National Agricultural Statistics Service Notice of Intent To Suspend the Agricultural Labor Survey and Farm Labor Reports AGENCY: National Agricultural Statistics Service, USDA. ACTION: Notice of suspension of data collection and publication. SUMMARY: This notice announces the intention of...
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Education Statistics Quarterly, Fall 2002.
ERIC Educational Resources Information Center
Dillow, Sally, Ed.
2003-01-01
This publication provides a comprehensive overview of work done across all parts of the National Center for Education Statistics (NCES). Each issue contains short publications, summaries, and descriptions that cover all NCES publications and data products released in a 3-month period. Each issue also contains a message from the NCES on a timely…
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Timber resource statistics for western Oregon, 1997.
David L. Azuma; Larry F. Bednar; Bruce A. Hiserote; Charles F. Veneklase
2004-01-01
This report is a summary of timber resource statistics for western Oregon, which includes Benton, Clackamas, Clatsop, Columbia, Coos, Curry, Douglas, Hood River, Jackson, Josephine, Lane, Lincoln, Linn, Marion, Multnomah, Polk, Tillamook, Washington, and Yamhill Counties. Data were collected as part of a statewide multiresource inventory. The inventory sampled all...
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Education Statistics Quarterly, Fall 2001.
ERIC Educational Resources Information Center
Dillow, Sally, Ed.
2001-01-01
The publication gives a comprehensive overview of work done across all parts of the National Center for Education Statistics (NCES). Each issue contains short publications, summaries, and descriptions that cover all NCES publications, data products, and funding opportunities developed over a 3-month period. Each issue also contains a message from…
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Education Statistics Quarterly. Volume 5, Issue 1.
ERIC Educational Resources Information Center
Dillow, Sally, Ed.
2003-01-01
This publication provides a comprehensive overview of work done across all parts of the National Center for Education Statistics (NCES). Each issue contains short publications, summaries, and descriptions that cover all NCES publications, data product, and funding opportunities developed over a 3-month period. Each issue also contains a message…
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Education Statistics Quarterly, Winter 2001.
ERIC Educational Resources Information Center
Dillow, Sally, Ed.
2002-01-01
This publication provides a comprehensive overview of work done across all parts of the National Center for Education Statistics (NCES). Each issue contains short publications, summaries, and descriptions that cover all NCES publications and data products released in a 3-month period. Each issue also contains a message from the NCES on a timely…
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Early estimate of motor vehicle traffic fatalities in 2009 : a brief statistical summary
DOT National Transportation Integrated Search
2010-03-01
statistical projection of traffic fatalities in 2009 shows that an estimated 33,963 people died in motor vehicle traffic crashes. This represents a decline of about 8.9 percent as compared to the 37,261 fatalities that occurred in 2008, as shown in T...
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This technical report presents a summary of indoor air studies that measured background concentrations of VOCs in the indoor air of thousands of North American residences and an evaluation and compilation of their reported statistical information.
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Timber resource statistics for eastern Oregon, 1999.
David L. Azuma; Paul A. Dunham; Bruce A. Hiserote; Charles F. Veneklase
2004-01-01
This report is a summary of timber resource statistics for eastern Oregon, which includes Baker, Crook, Deschutes, Gilliam, Grant, Harney, Jefferson, Klamath, Lake, Malheur, Morrow, Sherman, Umatilla, Union, Wallowa, Wasco, and Wheeler Counties. Data were collected as part of a statewide multiresource inventory. The inventory sampled all private and public lands except...
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Nomogram for sample size calculation on a straightforward basis for the kappa statistic.
Hong, Hyunsook; Choi, Yunhee; Hahn, Seokyung; Park, Sue Kyung; Park, Byung-Joo
2014-09-01
Kappa is a widely used measure of agreement. However, it may not be straightforward in some situation such as sample size calculation due to the kappa paradox: high agreement but low kappa. Hence, it seems reasonable in sample size calculation that the level of agreement under a certain marginal prevalence is considered in terms of a simple proportion of agreement rather than a kappa value. Therefore, sample size formulae and nomograms using a simple proportion of agreement rather than a kappa under certain marginal prevalences are proposed. A sample size formula was derived using the kappa statistic under the common correlation model and goodness-of-fit statistic. The nomogram for the sample size formula was developed using SAS 9.3. The sample size formulae using a simple proportion of agreement instead of a kappa statistic and nomograms to eliminate the inconvenience of using a mathematical formula were produced. A nomogram for sample size calculation with a simple proportion of agreement should be useful in the planning stages when the focus of interest is on testing the hypothesis of interobserver agreement involving two raters and nominal outcome measures. Copyright © 2014 Elsevier Inc. All rights reserved.
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Arroyo-Hernández, M; Mellado-Romero, M A; Páramo-Díaz, P; Martín-López, C M; Cano-Egea, J M; Vilá Y Rico, J
2015-01-01
The purpose of this study is to analyze if there is any difference between the arthroscopic reparation of full-thickness supraspinatus tears with simple row technique versus suture bridge technique. We accomplished a retrospective study of 123 patients with full-thickness supraspinatus tears between January 2009 and January 2013 in our hospital. There were 60 simple row reparations, and 63 suture bridge ones. The mean age in the simple row group was 62.9, and in the suture bridge group was 63.3 years old. There were more women than men in both groups (67%). All patients were studied using the Constant test. The mean Constant test in the suture bridge group was 76.7, and in the simple row group was 72.4. We have also accomplished a statistical analysis of each Constant item. Strength was higher in the suture bridge group, with a significant statistical difference (p 0.04). The range of movement was also greater in the suture bridge group, but was not statistically significant. Suture bridge technique has better clinical results than single row reparations, but the difference is not statistically significant (p = 0.298).
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Petsch, Harold E.
1979-01-01
Statistical summaries of daily streamflow data for 189 stations west of the Continental Divide in Colorado are presented in this report. Duration tables, high-flow sequence tables, and low-flow sequence tables provide information about daily mean discharge. The mean, variance, standard deviation, skewness, and coefficient of variation are provided for monthly and annual flows. Percentages of average flow are provided for monthly flows and first-order serial-correlation coefficients are provided for annual flows. The text explain the nature and derivation of the data and illustrates applications of the tabulated information by examples. The data may be used by agencies and individuals engaged in water studies. (USGS)
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DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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Analysis of the Capability Portfolio Review (CPR)
2014-06-01
facilitated by the MRM feature. PAT allows the analyst to quickly change how summary depictions are generated. Choices include; simple linear...database with supporting software that documents relationships between warfighting activities, the UJTL, systems, ACTDs, roadmaps, and capability areas. It
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Technology in rural transportation. Simple solution #10, wireless pagers to activate warning beacons
DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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Technology in rural transportation. Simple solution #6, traveler information on the internet
DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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Technology in rural transportation. Simple solution #5, traveler information using fax machines
DOT National Transportation Integrated Search
1997-01-01
This application was identified as a promising rural Intelligent Transportation Systems (ITS) solution under a project sponsored by the Federal Highway Administration (FHWA) and the ENTERPRISE program. This summary describes the solution as well as o...
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A 3D Bioprinted Model for the Study of Premalignant Breast Disease
2017-05-01
these glands and performed proof-of-principle 3D printing . We have printed simple ductal structures (tubes) and seeded breast epithelial cells. The...performed proof-of-principle 3D printing . We have printed simple ductal structures (tubes) and seeded breast epithelial cells. The next year we will...All of the PN17 reconstruction data from the 5 completed strains has also been sent to the University of Pittsburg for 3D printing . A summary of the
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Modular reweighting software for statistical mechanical analysis of biased equilibrium data
NASA Astrophysics Data System (ADS)
Sindhikara, Daniel J.
2012-07-01
Here a simple, useful, modular approach and software suite designed for statistical reweighting and analysis of equilibrium ensembles is presented. Statistical reweighting is useful and sometimes necessary for analysis of equilibrium enhanced sampling methods, such as umbrella sampling or replica exchange, and also in experimental cases where biasing factors are explicitly known. Essentially, statistical reweighting allows extrapolation of data from one or more equilibrium ensembles to another. Here, the fundamental separable steps of statistical reweighting are broken up into modules - allowing for application to the general case and avoiding the black-box nature of some “all-inclusive” reweighting programs. Additionally, the programs included are, by-design, written with little dependencies. The compilers required are either pre-installed on most systems, or freely available for download with minimal trouble. Examples of the use of this suite applied to umbrella sampling and replica exchange molecular dynamics simulations will be shown along with advice on how to apply it in the general case. New version program summaryProgram title: Modular reweighting version 2 Catalogue identifier: AEJH_v2_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEJH_v2_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: GNU General Public License, version 3 No. of lines in distributed program, including test data, etc.: 179 118 No. of bytes in distributed program, including test data, etc.: 8 518 178 Distribution format: tar.gz Programming language: C++, Python 2.6+, Perl 5+ Computer: Any Operating system: Any RAM: 50-500 MB Supplementary material: An updated version of the original manuscript (Comput. Phys. Commun. 182 (2011) 2227) is available Classification: 4.13 Catalogue identifier of previous version: AEJH_v1_0 Journal reference of previous version: Comput. Phys. Commun. 182 (2011) 2227 Does the new version supersede the previous version?: Yes Nature of problem: While equilibrium reweighting is ubiquitous, there are no public programs available to perform the reweighting in the general case. Further, specific programs often suffer from many library dependencies and numerical instability. Solution method: This package is written in a modular format that allows for easy applicability of reweighting in the general case. Modules are small, numerically stable, and require minimal libraries. Reasons for new version: Some minor bugs, some upgrades needed, error analysis added. analyzeweight.py/analyzeweight.py2 has been replaced by “multihist.py”. This new program performs all the functions of its predecessor while being versatile enough to handle other types of histograms and probability analysis. “bootstrap.py” was added. This script performs basic bootstrap resampling allowing for error analysis of data. “avg_dev_distribution.py” was added. This program computes the averages and standard deviations of multiple distributions, making error analysis (e.g. from bootstrap resampling) easier to visualize. WRE.cpp was slightly modified purely for cosmetic reasons. The manual was updated for clarity and to reflect version updates. Examples were removed from the manual in favor of online tutorials (packaged examples remain). Examples were updated to reflect the new format. An additional example is included to demonstrate error analysis. Running time: Preprocessing scripts 1-5 minutes, WHAM engine <1 minute, postprocess script ∼1-5 minutes.
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Cascaded Amplitude Modulations in Sound Texture Perception
McWalter, Richard; Dau, Torsten
2017-01-01
Sound textures, such as crackling fire or chirping crickets, represent a broad class of sounds defined by their homogeneous temporal structure. It has been suggested that the perception of texture is mediated by time-averaged summary statistics measured from early auditory representations. In this study, we investigated the perception of sound textures that contain rhythmic structure, specifically second-order amplitude modulations that arise from the interaction of different modulation rates, previously described as “beating” in the envelope-frequency domain. We developed an auditory texture model that utilizes a cascade of modulation filterbanks that capture the structure of simple rhythmic patterns. The model was examined in a series of psychophysical listening experiments using synthetic sound textures—stimuli generated using time-averaged statistics measured from real-world textures. In a texture identification task, our results indicated that second-order amplitude modulation sensitivity enhanced recognition. Next, we examined the contribution of the second-order modulation analysis in a preference task, where the proposed auditory texture model was preferred over a range of model deviants that lacked second-order modulation rate sensitivity. Lastly, the discriminability of textures that included second-order amplitude modulations appeared to be perceived using a time-averaging process. Overall, our results demonstrate that the inclusion of second-order modulation analysis generates improvements in the perceived quality of synthetic textures compared to the first-order modulation analysis considered in previous approaches. PMID:28955191
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Cascaded Amplitude Modulations in Sound Texture Perception.
McWalter, Richard; Dau, Torsten
2017-01-01
Sound textures, such as crackling fire or chirping crickets, represent a broad class of sounds defined by their homogeneous temporal structure. It has been suggested that the perception of texture is mediated by time-averaged summary statistics measured from early auditory representations. In this study, we investigated the perception of sound textures that contain rhythmic structure, specifically second-order amplitude modulations that arise from the interaction of different modulation rates, previously described as "beating" in the envelope-frequency domain. We developed an auditory texture model that utilizes a cascade of modulation filterbanks that capture the structure of simple rhythmic patterns. The model was examined in a series of psychophysical listening experiments using synthetic sound textures-stimuli generated using time-averaged statistics measured from real-world textures. In a texture identification task, our results indicated that second-order amplitude modulation sensitivity enhanced recognition. Next, we examined the contribution of the second-order modulation analysis in a preference task, where the proposed auditory texture model was preferred over a range of model deviants that lacked second-order modulation rate sensitivity. Lastly, the discriminability of textures that included second-order amplitude modulations appeared to be perceived using a time-averaging process. Overall, our results demonstrate that the inclusion of second-order modulation analysis generates improvements in the perceived quality of synthetic textures compared to the first-order modulation analysis considered in previous approaches.
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Misuse of statistical methods: critical assessment of articles in BMJ from January to March 1976.
Gore, S M; Jones, I G; Rytter, E C
1977-01-01
Sixty-two reports that appeared as Papers and Originals (excluding short reports) in 13 consecutive issues of the British Medical journal included statistical analysis. Thirty-two had statistical errors of one kind or another; in 18 fairly serious faults were discovered. The summaries of five reports made some claim that was unsupportable on re-examination of the data. Medical investigators should consult with people who have a real understanding of statistical methods throughout their projects. PMID:832023
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DOE Office of Scientific and Technical Information (OSTI.GOV)
Not Available
1978-10-03
This report is a six-part statistical summary of surface weather observations for Torrejon AB, Madrid Spain. It contains the following parts: (A) Weather Conditions; Atmospheric Phenomena; (B) Precipitation, Snowfall and Snow Depth (daily amounts and extreme values); (C) Surface winds; (D) Ceiling Versus Visibility; Sky Cover; (E) Psychrometric Summaries (daily maximum and minimum temperatures, extreme maximum and minimum temperatures, psychrometric summary of wet-bulb temperature depression versus dry-bulb temperature, means and standard deviations of dry-bulb, wet-bulb and dew-point temperatures and relative humidity); and (F) Pressure Summary (means, standard, deviations, and observation counts of station pressure and sea-level pressure). Data in thismore » report are presented in tabular form, in most cases in percentage frequency of occurrence or cumulative percentage frequency of occurrence tables.« less
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ERIC Educational Resources Information Center
Foster, Emily M.
1942-01-01
The U.S. Office of Education is required by law to collect statistics to show the condition and progress of education. Statistics can be made available, on a national scale, to the extent that school administrators, principals, and college officials cooperate on a voluntary basis with the Office of Education in making the facts available. This…
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ERIC Educational Resources Information Center
Pleis, J. R.; Ward, B. W.; Lucas, J. W.
2010-01-01
Objectives: This report presents health statistics from the 2009 National Health Interview Survey (NHIS) for the civilian noninstitutionalized adult population, classified by sex, age, race and ethnicity, education, family income, poverty status, health insurance coverage, marital status, and place and region of residence. Estimates are presented…
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Comments on statistical issues in numerical modeling for underground nuclear test monitoring
DOE Office of Scientific and Technical Information (OSTI.GOV)
Nicholson, W.L.; Anderson, K.K.
1993-11-01
The Symposium concluded with prepared summaries by four experts in the involved disciplines. These experts made no mention of statistics and/or the statistical content of issues. The first author contributed an extemporaneous statement at the Symposium because there are important issues associated with conducting and evaluating numerical modeling that are familiar to statisticians and often treated successfully by them. This note expands upon these extemporaneous remarks.
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Powerful Statistical Inference for Nested Data Using Sufficient Summary Statistics
Dowding, Irene; Haufe, Stefan
2018-01-01
Hierarchically-organized data arise naturally in many psychology and neuroscience studies. As the standard assumption of independent and identically distributed samples does not hold for such data, two important problems are to accurately estimate group-level effect sizes, and to obtain powerful statistical tests against group-level null hypotheses. A common approach is to summarize subject-level data by a single quantity per subject, which is often the mean or the difference between class means, and treat these as samples in a group-level t-test. This “naive” approach is, however, suboptimal in terms of statistical power, as it ignores information about the intra-subject variance. To address this issue, we review several approaches to deal with nested data, with a focus on methods that are easy to implement. With what we call the sufficient-summary-statistic approach, we highlight a computationally efficient technique that can improve statistical power by taking into account within-subject variances, and we provide step-by-step instructions on how to apply this approach to a number of frequently-used measures of effect size. The properties of the reviewed approaches and the potential benefits over a group-level t-test are quantitatively assessed on simulated data and demonstrated on EEG data from a simulated-driving experiment. PMID:29615885
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Balas, Benjamin
2016-11-01
Peripheral visual perception is characterized by reduced information about appearance due to constraints on how image structure is represented. Visual crowding is a consequence of excessive integration in the visual periphery. Basic phenomenology of visual crowding and other tasks have been successfully accounted for by a summary-statistic model of pooling, suggesting that texture-like processing is useful for how information is reduced in peripheral vision. I attempt to extend the scope of this model by examining a property of peripheral vision: reduced perceived numerosity in the periphery. I demonstrate that a summary-statistic model of peripheral appearance accounts for reduced numerosity in peripherally viewed arrays of randomly placed dots, but does not account for observed effects of dot clustering within such arrays. The model thus offers a limited account of how numerosity is perceived in the visual periphery. I also demonstrate that the model predicts that numerosity estimation is sensitive to element shape, which represents a novel prediction regarding the phenomenology of peripheral numerosity perception. Finally, I discuss ways to extend the model to a broader range of behavior and the potential for using the model to make further predictions about how number is perceived in untested scenarios in peripheral vision.
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A summary of modulus of elasticity and knot size surveys for laminating grades of lumber
R. W. Wolfe; R. C. Moody
1981-01-01
A summary of modulus of elasticity (MOE) and knot data is presented for grades of lumber commonly used to manufacture glued-laminated (glulam) timber by the laminating Industry. Tabulated values represent 30 different studies covering a time span of over 16 years. Statistical estimates of average and near-maximum knot sizes as well as mean and coefficient of variation...
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1982-11-01
N* I. Khednipin.CeldegN. CG-D-Y4-82 4. Id ed I.ld j. D* NIUVin 1982U /LIAC WH ,. Peb- olm..,, Cede 9. Pwmln,, OWe, .omee . en Adoe., 10 . Wei Uat Me... 10 PRE-SURVEY PLANNING ..a-C ..hin.at.......................... 11 Overviewon of S ..... ........... 1......... ... .16 R eWaypoint Defintion...TDSS Statistics Summary.. ....................... 29 9 Example of Range-Range Waypoint Calculation.................30 10 Summary of Range-Range Waypoint
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ERIC Educational Resources Information Center
Kellermann, Arthur L.; Fuqua-Whitley, Dawna S.; Rivara, Frederick P.
This summary explaining the results of evaluations of programs to prevent youth violence is an attempt to fill the gap in information about what works and what does not. An effort is made to place the problem of youth violence in perspective, using information largely taken from Bureau of Justice statistics. The existing programs are divided into…
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DOT National Transportation Integrated Search
2017-12-01
Visions of self-driving vehicles abound in popular science and entertainment. Many programs are at work to make a reality catch of this imagination. Vehicle automation has progressed rapidly in recent years, from simple driver assistance technologies...
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DOT National Transportation Integrated Search
2014-04-01
The Federal Highway Administrations 1995-1997 National Pavement Design Review found that nearly 80 percent of : states use the 1972, 1986, or 1993 AASHTO Design Guides. These design guides are relying on empirical relationships : between paving ma...
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ERIC Educational Resources Information Center
Kapenekas, Mary Platis
1970-01-01
This article presents a summary of terminology and principles that relate to home lighting. It also describes how to construct a relatively simple and economical lighting comparator that can be used as a tool to show effects of various kinds of lighting on the interior home environment. (Editor)
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Cesium-diode performances from the 1963-to-1971 Thermionic Conversion Specialist Conferences
NASA Technical Reports Server (NTRS)
Morris, J. F.
1972-01-01
Indexes and summaries of the conference papers containing cesium-diode results are presented. Lists of converter materials, geometries, conditions, outputs, and lifetimes accompany the references. Simple chemical designations for emitters, collectors, and additives direct the reader to appropriate selections.
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GLISSANDO: GLauber Initial-State Simulation AND mOre…
NASA Astrophysics Data System (ADS)
Broniowski, Wojciech; Rybczyński, Maciej; Bożek, Piotr
2009-01-01
We present a Monte Carlo generator for a variety of Glauber-like models (the wounded-nucleon model, binary collisions model, mixed model, model with hot spots). These models describe the early stages of relativistic heavy-ion collisions, in particular the spatial distribution of the transverse energy deposition which ultimately leads to production of particles from the interaction region. The original geometric distribution of sources in the transverse plane can be superimposed with a statistical distribution simulating the dispersion in the generated transverse energy in each individual collision. The program generates inter alia the fixed-axes (standard) and variable-axes (participant) two-dimensional profiles of the density of sources in the transverse plane and their azimuthal Fourier components. These profiles can be used in further analysis of physical phenomena, such as the jet quenching, event-by-event hydrodynamics, or analysis of the elliptic flow and its fluctuations. Characteristics of the event (multiplicities, eccentricities, Fourier coefficients, etc.) are stored in a ROOT file and can be analyzed off-line. In particular, event-by-event studies can be carried out in a simple way. A number of ROOT scripts is provided for that purpose. Supplied variants of the code can also be used for the proton-nucleus and deuteron-nucleus collisions. Program summaryProgram title: GLISSANDO Catalogue identifier: AEBS_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEBS_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 4452 No. of bytes in distributed program, including test data, etc.: 34 766 Distribution format: tar.gz Programming language: C++ Computer: any computer with a C++ compiler and the ROOT environment [R. Brun, et al., Root Users Guide 5.16, CERN, 2007, http://root.cern.ch[1