AVIRIS data characteristics and their effects on spectral discrimination of rocks exposed in the Drum Mountains, Utah: Results of a preliminary study

NASA Technical Reports Server (NTRS)

Bailey, G. B.; Dwyer, J. L.; Meyer, D. J.

1988-01-01

Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) data collected over a geologically diverse field site and over a nearby calibration site were analyzed and interpreted in efforts to document radiometric and geometric characteristics of AVIRIS, quantify and correct for detrimental sensor phenomena, and evaluate the utility of AVIRIS data for discriminating rock types and identifying their constituent mineralogy. AVIRIS data acquired for these studies exhibit a variety of detrimental artifacts and have lower signal-to-noise ratios than expected in the longer wavelength bands. Artifacts are both inherent in the image data and introduced during ground processing, but most may be corrected by appropriate processing techniques. Poor signal-to-noise characteristics of this AVIRIS data set limited the usefulness of the data for lithologic discrimination and mineral identification. Various data calibration techniques, based on field-acquired spectral measurements, were applied to the AVIRIS data. Major absorption features of hydroxyl-bearing minerals were resolved in the spectra of the calibrated AVIRIS data, and the presence of hydroxyl-bearing minerals at the corresponding ground locations was confirmed by field data.

A Ground Truthing Method for AVIRIS Overflights Using Canopy Absorption Spectra

NASA Technical Reports Server (NTRS)

Gamon, John A.; Serrano, Lydia; Roberts, Dar A.; Ustin, Susan L.

1996-01-01

Remote sensing for ecological field studies requires ground truthing for accurate interpretation of remote imagery. However, traditional vegetation sampling methods are time consuming and hard to relate to the scale of an AVIRIS scene. The large errors associated with manual field sampling, the contrasting formats of remote and ground data, and problems with coregistration of field sites with AVIRIS pixels can lead to difficulties in interpreting AVIRIS data. As part of a larger study of fire risk in the Santa Monica Mountains of southern California, we explored a ground-based optical method of sampling vegetation using spectrometers mounted both above and below vegetation canopies. The goal was to use optical methods to provide a rapid, consistent, and objective means of "ground truthing" that could be related both to AVIRIS imagery and to conventional ground sampling (e.g., plot harvests and pigment assays).

Retrieval of biophysical parameters with AVIRIS and ISM: The Landes Forest, south west France

NASA Technical Reports Server (NTRS)

Zagolski, F.; Gastellu-Etchegorry, J. P.; Mougin, E.; Giordano, G.; Marty, G.; Letoan, T.; Beaudoin, A.

1992-01-01

The first steps of an experiment for investigating the capability of airborne spectrometer data for retrieval of biophysical parameters of vegetation, especially water conditions are presented. Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and ISM data were acquired in the frame of the 1991 NASA/JPL and CNES campaigns on the Landes, South west France, a large and flat forest area with mainly maritime pines. In-situ measurements were completed at that time; i.e. reflectance spectra, atmospheric profiles, sampling for further laboratory analyses of elements concentrations (lignin, water, cellulose, nitrogen,...). All information was integrated in an already existing data base (age, LAI, DBH, understory cover,...). A methodology was designed for (1) obtaining geometrically and atmospherically corrected reflectance data, (2) registering all available information, and (3) analyzing these multi-source informations. Our objective is to conduct comparative studies with simulation reflectance models, and to improve these models, especially in the MIR.

Analysis of the boreal forest-tundra ecotone: A test of AVIRIS capabilities in the Eastern Canadian subarctic

NASA Technical Reports Server (NTRS)

Goward, Samuel N.; Petzold, Donald E.

1989-01-01

A comparison was conducted between ground reflectance spectra collected in Schefferville, Canada and imaging spectrometer observations acquired by the AVIRIS sensor in a flight of the ER-2 Aircraft over the same region. The high spectral contrasts present in the Canadian Subarctic appeared to provide an effective test of the operational readiness of the AVIRIS sensor. Previous studies show that in this location various land cover materials possess a wide variety of visible/near infrared reflectance properties. Thus, this landscape served as an excellent test for the sensing variabilities of the newly developed AVIRIS sensor. An underlying hypothesis was that the unique visible/near infrared spectral reflectance patterns of Subarctic lichens could be detected from high altitudes by this advanced imaging spectrometer. The relation between lichen occurrence and boreal forest-tundra ecotone dynamics was investigated.

A Comparison of Spatial and Spectral Image Resolution for Mapping Invasive Plants in Coastal California

NASA Astrophysics Data System (ADS)

Underwood, Emma C.; Ustin, Susan L.; Ramirez, Carlos M.

2007-01-01

We explored the potential of detecting three target invasive species: iceplant ( Carpobrotus edulis), jubata grass ( Cortaderia jubata), and blue gum ( Eucalyptus globulus) at Vandenberg Air Force Base, California. We compared the accuracy of mapping six communities (intact coastal scrub, iceplant invaded coastal scrub, iceplant invaded chaparral, jubata grass invaded chaparral, blue gum invaded chaparral, and intact chaparral) using four images with different combinations of spatial and spectral resolution: hyperspectral AVIRIS imagery (174 wavebands, 4 m spatial resolution), spatially degraded AVIRIS (174 bands, 30 m), spectrally degraded AVIRIS (6 bands, 4 m), and both spatially and spectrally degraded AVIRIS (6 bands, 30 m, i.e., simulated Landsat ETM data). Overall success rates for classifying the six classes was 75% (kappa 0.7) using full resolution AVIRIS, 58% (kappa 0.5) for the spatially degraded AVIRIS, 42% (kappa 0.3) for the spectrally degraded AVIRIS, and 37% (kappa 0.3) for the spatially and spectrally degraded AVIRIS. A true Landsat ETM image was also classified to illustrate that the results from the simulated ETM data were representative, which provided an accuracy of 50% (kappa 0.4). Mapping accuracies using different resolution images are evaluated in the context of community heterogeneity (species richness, diversity, and percent species cover). Findings illustrate that higher mapping accuracies are achieved with images possessing high spectral resolution, thus capturing information across the visible and reflected infrared solar spectrum. Understanding the tradeoffs in spectral and spatial resolution can assist land managers in deciding the most appropriate imagery with respect to target invasives and community characteristics.

Spectral variations in rocks and soils containing ferric iron hydroxide and(or) sulfate minerals as seen by AVIRIS and laboratory spectroscopy

USGS Publications Warehouse

Rockwell, Barnaby W.

2004-01-01

Analysis of Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data covering the Big Rock Candy Mountain area of the Marysvale volcanic field, west-central Utah, identified abundant rocks and soils bearing jarosite, goethite, and chlorite associated with volcanic rocks altered to propylitic grade during the Miocene (2321 Ma). Propylitically-altered rocks rich in pyrite associated with the relict feeder zones of convecting, shallow hydrothermal systems are currently undergoing supergene oxidation to natrojarosite, kaolinite, and gypsum. Goethite coatings are forming at the expense of jarosite where most pyrite has been consumed through oxidation in alluvium derived from pyrite-bearing zones. Spectral variations in the goethite-bearing rocks that resemble variations found in reference library samples of goethites of varying grain size were observed in the AVIRIS data. Rocks outside of the feeder zones have relatively low pyrite content and are characterized by chlorite, epidote, and calcite, with local copper-bearing quartz-calcite veins. Iron-bearing minerals in these rocks are weathering directly to goethite. Laboratory spectral analyses were applied to samples of iron-bearing rock outcrops and alluvium collected from the area to determine the accuracy of the AVIRIS-based mineral identification. The accuracy of the iron mineral identification results obtained by analysis of the AVIRIS data was confirmed. In general, the AVIRIS analysis results were accurate in identifying medium-grained goethite, coarse-grained goethite, medium- to coarse-grained goethite with trace jarosite, and mixtures of goethite and jarosite. However, rock fragments from alluvial areas identified as thin coatings of goethite with the AVIRIS data were found to consist mainly of medium- to coarse-grained goethite based on spectral characteristics in the visible and near-infrared. To determine if goethite abundance contributed to the spectral variations observed in goethite-bearing rocks with AVIRIS data, a laboratory experiment was performed in which spectra were acquired of a goethite-bearing rock while progressively decreasing the areal abundance of the rock with respect to a background of white, fine-grained quartz sand. This experiment found that, with decreasing material abundance, the crystal field absorption feature of goethite near 1.0 micron decreases in depth and narrows more from the long wavelength side of the feature than from the short wavelength side, as is the case in goethite reference spectra as grain size decreases from coarse to fine. In the Marysvale study area, goethite-bearing alluvium downgradient from source outcrops tends to be identified as finer-grained or thin coatings of goethite due to the minerals presence in lesser abundance. The goethite-bearing alluvium is a closer match to reference spectra of thin coatings of goethite even though the actual grain size of the contained goethite fragments is medium to coarse grained, the same on average as that from the source outcrops. Coarser-grained goethite most likely will be correctly identified in areas of greater goethite abundance proximal to jarosite-bearing source rock where the surface is relatively free of goethite-free soil components and vegetation that corrupt the goethite spectral response. When analysis of imaging spectroscopy data is performed using reference spectra of iron minerals of varying grain sizes and mixed compositions, the results are useful not only for purposes of mineral identification, but also for distinguishing goethite-bearing outcrop from alluvial surfaces with similar mineralogy, providing valuable information for geologic, geomorphologic, mineral exploration, and environmental assessment studies.

Effects of spectrometer band pass, sampling, and signal-to-noise ratio on spectral identification using the Tetracorder algorithm

USGS Publications Warehouse

Swayze, G.A.; Clark, R.N.; Goetz, A.F.H.; Chrien, T.H.; Gorelick, N.S.

2003-01-01

Estimates of spectrometer band pass, sampling interval, and signal-to-noise ratio required for identification of pure minerals and plants were derived using reflectance spectra convolved to AVIRIS, HYDICE, MIVIS, VIMS, and other imaging spectrometers. For each spectral simulation, various levels of random noise were added to the reflectance spectra after convolution, and then each was analyzed with the Tetracorder spectra identification algorithm [Clark et al., 2003]. The outcome of each identification attempt was tabulated to provide an estimate of the signal-to-noise ratio at which a given percentage of the noisy spectra were identified correctly. Results show that spectral identification is most sensitive to the signal-to-noise ratio at narrow sampling interval values but is more sensitive to the sampling interval itself at broad sampling interval values because of spectral aliasing, a condition when absorption features of different materials can resemble one another. The band pass is less critical to spectral identification than the sampling interval or signal-to-noise ratio because broadening the band pass does not induce spectral aliasing. These conclusions are empirically corroborated by analysis of mineral maps of AVIRIS data collected at Cuprite, Nevada, between 1990 and 1995, a period during which the sensor signal-to-noise ratio increased up to sixfold. There are values of spectrometer sampling and band pass beyond which spectral identification of materials will require an abrupt increase in sensor signal-to-noise ratio due to the effects of spectral aliasing. Factors that control this threshold are the uniqueness of a material's diagnostic absorptions in terms of shape and wavelength isolation, and the spectral diversity of the materials found in nature and in the spectral library used for comparison. Array spectrometers provide the best data for identification when they critically sample spectra. The sampling interval should not be broadened to increase the signal-to-noise ratio in a photon-noise-limited system when high levels of accuracy are desired. It is possible, using this simulation method, to select optimum combinations of band-pass, sampling interval, and signal-to-noise ratio values for a particular application that maximize identification accuracy and minimize the volume of imaging data.

An assessment of AVIRIS data for hydrothermal alteration mapping in the Goldfield Mining District, Nevada

NASA Technical Reports Server (NTRS)

Carrere, Veronique; Abrams, Michael J.

1988-01-01

Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) data were acquired over the Goldfield Mining District, Nevada, in September 1987. Goldfield is one of the group of large epithermal precious metal deposits in Tertiary volcanic rocks, associated with silicic volcanism and caldera formation. Hydrothermal alteration consists of silicification along fractures, advanced agrillic and argillic zones further away from veins and more widespread propylitic zones. An evaluation of AVIRIS data quality was performed. Faults in the data, related to engineering problems and a different behavior of the instrument while on-board the U2, were encountered. Consequently, a decision was made to use raw data and correct them only for dark current variations and detector read-out-delays. New software was written to that effect. Atmospheric correction was performed using the flat field correction technique. Analysis of the data was then performed to extract spectral information, mainly concentrating on the 2 to 2.45 micron window, as the alteration minerals of interest have their distinctive spectral reflectance features in this region. Principally kaolinite and alunite spectra were clearly obtained. Mapping of the different minerals and alteration zones was attempted using ratios and clustering techniques. Poor signal-to-noise performance of the instrument and the lack of appropriate software prevented the production of an alteration map of the area. Spectra extracted locally from the AVIRIS data were checked in the field by collecting representative samples of the outcrops.

Oil detection in the coastal marshes of Louisiana using MESMA applied to band subsets of AVIRIS data

USGS Publications Warehouse

Peterson, Seth H.; Roberts, Dar A.; Beland, Michael; Kokaly, Raymond F.; Ustin, Susan L.

2015-01-01

We mapped oil presence in the marshes of Barataria Bay, Louisiana following the Deepwater Horizon oil spill using Airborne Visible InfraRed Imaging Spectrometer (AVIRIS) data. Oil and non-photosynthetic vegetation (NPV) have very similar spectra, differing only in two narrow hydrocarbon absorption regions around 1700 and 2300 nm. Confusion between NPV and oil is expressed as an increase in oil fraction error with increasing NPV, as shown by Multiple Endmember Spectral Mixture Analysis (MESMA) applied to synthetic spectra generated with known endmember fractions. Significantly, the magnitude of error varied depending upon the type of NPV in the mixture. To reduce error, we used stable zone unmixing to identify a nine band subset that emphasized the hydrocarbon absorption regions, allowing for more accurate detection of oil presence using MESMA. When this band subset was applied to post-spill AVIRIS data acquired over Barataria Bay on several dates following the 2010 oil spill, accuracies ranged from 87.5% to 93.3%. Oil presence extended 10.5 m into the marsh for oiled shorelines, showing a reduced oil fraction with increasing distance from the shoreline.

Mapping potentialy asbestos-bearing rocks using imaging spectroscopy

USGS Publications Warehouse

Swayze, G.A.; Kokaly, R.F.; Higgins, C.T.; Clinkenbeard, J.P.; Clark, R.N.; Lowers, H.A.; Sutley, S.J.

2009-01-01

Rock and soil that may contain naturally occurring asbestos (NOA), a known human carcinogen, were mapped in the Sierra Nevada, California, using the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) to determine if these materials could be uniquely identified with spectroscopy. Such information can be used to prepare or refine maps of areas that may contain minerals that can be asbestiform, such as serpentine and tremolite-actinolite, which were the focus of this study. Although thick vegetation can conceal underlying rock and soil, use of linear-mixture spectra calculated from spectra of dry grass and serpentine allowed detection of serpentine in some parts of the study area with up to ~80% dry-grass cover. Chaparral vegetation, which was dominantly, but not exclusively, found in areas underlain by serpentinized ultramafic rocks, was also mapped. Overall, field checking at 201 sites indicated highly accurate identification by AVIRIS of mineral (94%) and vegetation (89%) categories. Practical applications of AVIRIS to mapping areas that may contain NOA include locating roads that are surfaced with serpentine aggregate, identifying sites that may require enhanced dust control or other safety measures, and filling gaps in geologic mapping where field access is limited.

Spectroscopic remote sensing of the distribution and persistence of oil from the Deepwater Horizon spill in Barataria Bay marshes

USGS Publications Warehouse

Kokaly, Raymond F.; Couvillion, Brady; Holloway, JoAnn M.; Roberts, Dar A.; Ustin, Susan L.; Peterson, Seth H.; Khanna, Shruti; Piazza, Sarai C.

2013-01-01

We applied a spectroscopic analysis to Airborne Visible/InfraRed Imaging Spectrometer (AVIRIS) data collected from low and medium altitudes during and after the Deepwater Horizon oil spill to delineate the distribution of oil-damaged canopies in the marshes of Barataria Bay, Louisiana. Spectral feature analysis compared the AVIRIS data to reference spectra of oiled marsh by using absorption features centered near 1.7 and 2.3 μm, which arise from CH bonds in oil. AVIRIS-derived maps of oiled shorelines from the individual dates of July 31, September 14, and October 4, 2010, were 89.3%, 89.8%, and 90.6% accurate, respectively. A composite map at 3.5 m grid spacing, accumulated from the three dates, was 93.4% accurate in detecting oiled shorelines. The composite map had 100% accuracy for detecting damaged plant canopy in oiled areas that extended more than 1.2 m into the marsh. Spatial resampling of the AVIRIS data to 30 m reduced the accuracy to 73.6% overall. However, detection accuracy remained high for oiled canopies that extended more than 4 m into the marsh (23 of 28 field reference points with oil were detected). Spectral resampling of the 3.5 m AVIRIS data to Landsat Enhanced Thematic Mapper (ETM) spectral response greatly reduced the detection of oil spectral signatures. With spatial resampling of simulated Landsat ETM data to 30 m, oil signatures were not detected. Overall, ~ 40 km of coastline, marsh comprised mainly of Spartina alterniflora and Juncus roemerianus, were found to be oiled in narrow zones at the shorelines. Zones of oiled canopies reached on average 11 m into the marsh, with a maximum reach of 21 m. The field and airborne data showed that, in many areas, weathered oil persisted in the marsh from the first field survey, July 10, to the latest airborne survey, October 4, 2010. The results demonstrate the applicability of high spatial resolution imaging spectrometer data to identifying contaminants in the environment for use in evaluating ecosystem disturbance and response.

Mapping vegetation in Yellowstone National Park using spectral feature analysis of AVIRIS data

USGS Publications Warehouse

Kokaly, Raymond F.; Despain, Don G.; Clark, Roger N.; Livo, K. Eric

2003-01-01

Knowledge of the distribution of vegetation on the landscape can be used to investigate ecosystem functioning. The sizes and movements of animal populations can be linked to resources provided by different plant species. This paper demonstrates the application of imaging spectroscopy to the study of vegetation in Yellowstone National Park (Yellowstone) using spectral feature analysis of data from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS). AVIRIS data, acquired on August 7, 1996, were calibrated to surface reflectance using a radiative transfer model and field reflectance measurements of a ground calibration site. A spectral library of canopy reflectance signatures was created by averaging pixels of the calibrated AVIRIS data over areas of known forest and nonforest vegetation cover types in Yellowstone. Using continuum removal and least squares fitting algorithms in the US Geological Survey's Tetracorder expert system, the distributions of these vegetation types were determined by comparing the absorption features of vegetation in the spectral library with the spectra from the AVIRIS data. The 0.68 μm chlorophyll absorption feature and leaf water absorption features, centered near 0.98 and 1.20 μm, were analyzed. Nonforest cover types of sagebrush, grasslands, willows, sedges, and other wetland vegetation were mapped in the Lamar Valley of Yellowstone. Conifer cover types of lodgepole pine, whitebark pine, Douglas fir, and mixed Engelmann spruce/subalpine fir forests were spectrally discriminated and their distributions mapped in the AVIRIS images. In the Mount Washburn area of Yellowstone, a comparison of the AVIRIS map of forest cover types to a map derived from air photos resulted in an overall agreement of 74.1% (kappa statistic=0.62).

NASA AVIRIS Map shows Spectral Signature of 2013 Rim Fire

NASA Image and Video Library

2015-04-09

At left, a NASA AVIRIS map shows the spectral signature of the 2013 Rim fire in and near Yosemite National Park, California, the third largest in the state's history, burning more than 250,000 acres. Almost two years later, forest restoration efforts are still ongoing. Charred wood has a strong signal in the wavelengths shown here in red, so areas that are predominantly red in the image were heavily burned. The wavelengths of green, visible light (the color of vegetation) appear on this map as blue. There are no solid blue patches on the map because no large areas of green, living foliage survived the fire. Purple, a mixture of red and blue, indicates an area where charred wood and living plants are mingled. This image provides far more information about the state of the post-fire vegetation than the view on the right, which is what an observer flying overhead would see. AVIRIS is a unique NASA science instrument that measures the complete solar reflected portion of the electromagnetic spectrum with unmatched spectral range, calibration accuracy and signal-to-noise ratio. AVIRIS spectra are measured from 370 to 2,500 nanometers at 9.8-nanometer intervals. Images are acquired with 20-, 6- or 4-meter (66-, 20, or 13-feet) spatial resolution with a 34 degree swath. Up to 100 million spectra are measured in image format on each flight. The spectral image measurements are provided in orthorectified (geometrically corrected) format for direct use by scientists. http://photojournal.jpl.nasa.gov/catalog/PIA19361

On validating remote sensing simulations using coincident real data

NASA Astrophysics Data System (ADS)

Wang, Mingming; Yao, Wei; Brown, Scott; Goodenough, Adam; van Aardt, Jan

2016-05-01

The remote sensing community often requires data simulation, either via spectral/spatial downsampling or through virtual, physics-based models, to assess systems and algorithms. The Digital Imaging and Remote Sensing Image Generation (DIRSIG) model is one such first-principles, physics-based model for simulating imagery for a range of modalities. Complex simulation of vegetation environments subsequently has become possible, as scene rendering technology and software advanced. This in turn has created questions related to the validity of such complex models, with potential multiple scattering, bidirectional distribution function (BRDF), etc. phenomena that could impact results in the case of complex vegetation scenes. We selected three sites, located in the Pacific Southwest domain (Fresno, CA) of the National Ecological Observatory Network (NEON). These sites represent oak savanna, hardwood forests, and conifer-manzanita-mixed forests. We constructed corresponding virtual scenes, using airborne LiDAR and imaging spectroscopy data from NEON, ground-based LiDAR data, and field-collected spectra to characterize the scenes. Imaging spectroscopy data for these virtual sites then were generated using the DIRSIG simulation environment. This simulated imagery was compared to real AVIRIS imagery (15m spatial resolution; 12 pixels/scene) and NEON Airborne Observation Platform (AOP) data (1m spatial resolution; 180 pixels/scene). These tests were performed using a distribution-comparison approach for select spectral statistics, e.g., established the spectra's shape, for each simulated versus real distribution pair. The initial comparison results of the spectral distributions indicated that the shapes of spectra between the virtual and real sites were closely matched.

Relationships of soil, grass, and bedrock over the Kaweah Serpentinite Melange through spectral mixture analysis of AVIRIS data

NASA Technical Reports Server (NTRS)

Mustard, John F.

1993-01-01

A linear mixing model is used to model the spectral variability of an AVIRIS scene from the western foothills of the Sierra Nevada and calibrate these radiance data to reflectance. Five spectral endmembers from the AVIRIS data, plus an ideal 'shade' endmember were required to model the continuum reflectance of each pixel in the image. Three of the endmembers were interpreted to model the surface constituents green vegetation, dry grass, and illumination. Comparison of the fraction images to the bedrock geology maps indicates that substrate composition must be a factor contributing to the spectral properties of these endmembers. Detailed examination of the reflectance spectra of the three soil endmembers reveals that differences in the amount of ferric and ferrous iron and/or organic constituents in the soils is largely responsible for the differences in spectral properties of these endmembers.

Hyperspectral Imaging Sensors and the Marine Coastal Zone

NASA Technical Reports Server (NTRS)

Richardson, Laurie L.

2000-01-01

Hyperspectral imaging sensors greatly expand the potential of remote sensing to assess, map, and monitor marine coastal zones. Each pixel in a hyperspectral image contains an entire spectrum of information. As a result, hyperspectral image data can be processed in two very different ways: by image classification techniques, to produce mapped outputs of features in the image on a regional scale; and by use of spectral analysis of the spectral data embedded within each pixel of the image. The latter is particularly useful in marine coastal zones because of the spectral complexity of suspended as well as benthic features found in these environments. Spectral-based analysis of hyperspectral (AVIRIS) imagery was carried out to investigate a marine coastal zone of South Florida, USA. Florida Bay is a phytoplankton-rich estuary characterized by taxonomically distinct phytoplankton assemblages and extensive seagrass beds. End-member spectra were extracted from AVIRIS image data corresponding to ground-truth sample stations and well-known field sites. Spectral libraries were constructed from the AVIRIS end-member spectra and used to classify images using the Spectral Angle Mapper (SAM) algorithm, a spectral-based approach that compares the spectrum, in each pixel of an image with each spectrum in a spectral library. Using this approach different phytoplankton assemblages containing diatoms, cyanobacteria, and green microalgae, as well as benthic community (seagrasses), were mapped.

Synthesis of Multispectral Bands from Hyperspectral Data: Validation Based on Images Acquired by AVIRIS, Hyperion, ALI, and ETM+

NASA Technical Reports Server (NTRS)

Blonski, Slawomir; Glasser, Gerald; Russell, Jeffrey; Ryan, Robert; Terrie, Greg; Zanoni, Vicki

2003-01-01

Spectral band synthesis is a key step in the process of creating a simulated multispectral image from hyperspectral data. In this step, narrow hyperspectral bands are combined into broader multispectral bands. Such an approach has been used quite often, but to the best of our knowledge accuracy of the band synthesis simulations has not been evaluated thus far. Therefore, the main goal of this paper is to provide validation of the spectral band synthesis algorithm used in the ART software. The next section contains a description of the algorithm and an example of its application. Using spectral responses of AVIRIS, Hyperion, ALI, and ETM+, the following section shows how the synthesized spectral bands compare with actual bands, and it presents an evaluation of the simulation accuracy based on results of MODTRAN modeling. In the final sections of the paper, simulated images are compared with data acquired by actual satellite sensors. First, a Landsat 7 ETM+ image is simulated using an AVIRIS hyperspectral data cube. Then, two datasets collected with the Hyperion instrument from the EO-1 satellite are used to simulate multispectral images from the ALI and ETM+ sensors.

On the Relationship Between Hyperspectral Data and Foliar Nitrogen Content in Closed Canopy Forests

NASA Astrophysics Data System (ADS)

Knyazikhin, Y.; Schull, M.; Lepine, L. C.; Stenberg, P.; Mõttus, M.; Rautiainen, M.; Latorre, P.; Myneni, R.; Kaufmann, R.

2011-12-01

The importance of nitrogen for terrestrial ecosystem carbon dynamics and its climate feedback has been well recognized by the ecological community. Interaction between carbon and nitrogen at leaf level is among the fundamental mechanisms that directly control the dynamics of terrestrial vegetation carbon. This process influences absorption and scattering of solar radiation by foliage, which in turn impacts radiation reflected by the vegetation and measured by satellite sensors. NASA's Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and ground based data on canopy structure and foliage nitrogen concentration acquired over six sites in Maine, New England, Florida, North Carolina and Washington were analyzed to assess the role of canopy structure, leaf optics and its biochemical constituents in the spectral variation of radiation reflected by the forest. The study sites represent closed canopy forests (LAI~5). Our results suggest: 1. Impact of canopy structure is so strong that it can significantly suppress the sensitivity of hyperspectral data to leaf optics. 2. Forest reflectance spectra in the interval [710, 790 nm] are required to obtain the fraction of the total leaf area that a "sensor sees" in a given direction. For closed canopy forests its retrieval does not require canopy reflectance models, suggesting that canopy reflectance spectra in this interval provide a direct estimate of the leaf area fraction. 3. The leaf area fraction fully explains variation in measured reflectance spectra due to variation in canopy structure. This variable is used to estimate the mean leaf scattering over foliage that the "sensor sees." For example the nadir-viewing AVIRIS sensor accumulates foliage optical properties over 25% of the total foliage area in needle leaf forest and about 50% in broadleaf forest. 4. Leaf surface properties have an impact on forest reflectivity, lowering its sensitivity to leaf absorbing pigments. 5. Variation in foliar nitrogen concentration can explain up to 55% of variation in AVIRIS spectra in the interval between 400 and 900 nm. The remaining factors could be due to (a) impact of leaf surface properties and/or (b) under-sampling of leaf optical properties due to the single view of the AVIRIS sensor. The theory of canopy spectral invariants underlies the separation of leaf scattering from the total canopy reflectance spectrum.

The effect of variations in relative spectral response on the retrieval of land surface parameters from multiple sources of remotely sensed imagery

USGS Publications Warehouse

Meyer, D.J.; Chander, G.

2008-01-01

Airborne Visible Infrared Imaging Spectrometer (AVIRIS) images , collected over Sioux Falls, South Dakota, were used to quantify the effect of spectral response on different surface materials and to develop spectral "figures-of-merit" for spectral responses covering similar, but not identical spectral bands. In this simulation, AVIRIS images were converted to radiance, then spectrally resampled to six wavelength bands commonly used for terrestrial observation. Preliminary results indicate that differences between the simulations can be attributed to variations in surface reflectance within spectral bands, and suggest influences due to water vapor absorption. Radiance simulated from the spectrally narrow Moderate Resolution Imaging Spectroradiometer (MODIS) Relative Spectral Responses (RSR) was generally higher than that using the broader Enhanced Thematic Mapper Plus (ETM+) RSRs over most targets encountered over the test area. This is consistent with many MODIS bands being biased toward shorter wavelengths compared to corresponding ETM+ bands when viewing targets whose radiance decreases with wavelength. In some cases the higher radiance values appeared to occur where the MODIS RSR is better situated over peak reflected wavelengths. Simulation differences between MODIS & ETM+ bands in the near-infrared indicated higher MODIS radiance values that suggest the influence of water vapor absorption at 820 nanometers. This result agreed with water vapor values retrieved from the AVIRIS images themselves at around 2.7 cm precipitable water, and measurements made at a nearby AERONET node at around 2.8cm during the AVIRIS overflight ?? 2007 IEEE.

Spectral Dimensionality and Scale of Urban Radiance

NASA Technical Reports Server (NTRS)

Small, Christopher

2001-01-01

Characterization of urban radiance and reflectance is important for understanding the effects of solar energy flux on the urban environment as well as for satellite mapping of urban settlement patterns. Spectral mixture analyses of Landsat and Ikonos imagery suggest that the urban radiance field can very often be described with combinations of three or four spectral endmembers. Dimensionality estimates of Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) radiance measurements of urban areas reveal the existence of 30 to 60 spectral dimensions. The extent to which broadband imagery collected by operational satellites can represent the higher dimensional mixing space is a function of both the spatial and spectral resolution of the sensor. AVIRIS imagery offers the spatial and spectral resolution necessary to investigate the scale dependence of the spectral dimensionality. Dimensionality estimates derived from Minimum Noise Fraction (MNF) eigenvalue distributions show a distinct scale dependence for AVIRIS radiance measurements of Milpitas, California. Apparent dimensionality diminishes from almost 40 to less than 10 spectral dimensions between scales of 8000 m and 300 m. The 10 to 30 m scale of most features in urban mosaics results in substantial spectral mixing at the 20 m scale of high altitude AVIRIS pixels. Much of the variance at pixel scales is therefore likely to result from actual differences in surface reflectance at pixel scales. Spatial smoothing and spectral subsampling of AVIRIS spectra both result in substantial loss of information and reduction of apparent dimensionality, but the primary spectral endmembers in all cases are analogous to those found in global analyses of Landsat and Ikonos imagery of other urban areas.

AVIRIS data calibration information: Oquirrh and East Tintic mountains, Utah

USGS Publications Warehouse

Rockwell, Barnaby W.; Clark, Roger N.; Livo, K. Eric; McDougal, Robert R.; Kokaly, Raymond F.

2002-01-01

The information contained herein pertains to the original reflectance calibration derived solely from the Saltair beach site on the shores of Great Salt Lake.  The reflectance data derived from this calibration becomes markedly affected by residual absorptions due to atmospheric water vapor and carbon dioxide within short horizontal and vertical distances from the calibration site due to the presence of what is believed to be a distinct microclimate by the lake.  Subsequent to the development of this web site, a new reflectance calibration was derived which mitigated these effects.  Reflectance spectra of bright areas of known composition in the East Tintic Mountains, far from Great Salt Lake, were sampled from the calibrated high altitude AVIRIS data cubes and edited, or "polished," to identify artifacts related to residual absorptions of atmospheric gases, particulates, and sensor noise.  The subtle artifacts identified in this way were incorporated into the multiplier spectra derived from the original calibration site, generating new multiplier spectra that were used to re-calibrate the ATREM- and path radiance-corrected cubes to reflectance.  This process generated a reflectance calibration customized for the Oquirrh/East Tintic Mountain region.

A system overview of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS)

NASA Technical Reports Server (NTRS)

Porter, Wallace M.; Enmark, Harry T.

1987-01-01

The AVIRIS instrument has been designed to do high spectral resolution remote sensing of the Earth. Utilizing both silicon and indium antimonide line array detectors, AVIRIS covers the spectral region from 0.41 to 2.45 microns in 10-nm bands. It was designed to fly aboard NASA's U-2 and ER-2 aircraft, where it will simulate the performance of future spacecraft instrumentation. Flying at an altitude of 20 km, it has an instantaneous field of view of 20 m and views a swath over 10 km wide. With an ability to record 40 minutes of data, it can, during a single flight, capture 500 km of flight line.

Finding Spectral Patterns in Bark Beetle Infestations in the Sierra National Forest Using Landsat and AVIRIS Imagery

NASA Astrophysics Data System (ADS)

Heck, M. D.; Roberts, D. A.; Miller, D. L.; Tane, Z.

2016-12-01

Under normal circumstances, the bark beetles of the Sierra Nevada conifer forests are vital to ecosystem health; by eliminating weak trees, they allow other plants to grow in the space left behind, provide homes for various animals, and enrich the soil. However, climate change is putting these ecosystems at risk: warmer winters allow bark beetles to be active and breed year-round, and the severe drought conditions currently present in California leave otherwise healthy trees unable to defend against attacks. In this study, we used Google Earth and Landsat-8 imagery of the Sierra National Forest to locate trees that had been damaged by bark beetles between the summers of 2015 and 2016. Additionally, we used an Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) image from summer of 2015 to look for a difference in the spectra of consistently healthy trees compared to spectra of trees which appeared healthy in 2015 but died in 2016. We found that healthy trees were consistently brighter across the spectrum than dying trees. Comparisons using t-tests were made between elevations, slopes, aspects, and spectral indices of a form (Band 1 - Band 2)/(Band 1 + Band 2) on our AVIRIS data. While we were unable to find any specific indices which indicate beetle kills, wavelengths in the ranges of 400-500 and 2200-2500 nanometers showed the most sensitivity when the brightness difference was scaled and removed.

Synegies Between Visible/Near-Infrared Imaging Spectrometry and the Thermal Infrared in an Urban Environment: An Evaluation of the Hyperspectral Infrared Imager (HYSPIRI) Mission

NASA Technical Reports Server (NTRS)

Roberts, Dar A.; Quattrochi, Dale A.; Hulley, Glynn C.; Hook, Simon J.; Green, Robert O.

2012-01-01

A majority of the human population lives in urban areas and as such, the quality of urban environments is becoming increasingly important to the human population. Furthermore, these areas are major sources of environmental contaminants and sinks of energy and materials. Remote sensing provides an improved understanding of urban areas and their impacts by mapping urban extent, urban composition (vegetation and impervious cover fractions), and urban radiation balance through measures of albedo, emissivity and land surface temperature (LST). Recently, the National Research Council (NRC) completed an assessment of remote sensing needs for the next decade (NRC, 2007), proposing several missions suitable for urban studies, including a visible, near-infrared and shortwave infrared (VSWIR) imaging spectrometer and a multispectral thermal infrared (TIR) instrument called the Hyperspectral Infrared Imagery (HyspIRI). In this talk, we introduce the HyspIRI mission, focusing on potential synergies between VSWIR and TIR data in an urban area. We evaluate potential synergies using an Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and MODIS-ASTER (MASTER) image pair acquired over Santa Barbara, United States. AVIRIS data were analyzed at their native spatial resolutions (7.5m VSWIR and 15m TIR), and aggregated 60 m spatial resolution similar to HyspIRI. Surface reflectance was calculated using ACORN and a ground reflectance target to remove atmospheric and sensor artifacts. MASTER data were processed to generate estimates of spectral emissivity and LST using Modtran radiative transfer code and the ASTER Temperature Emissivity Separation algorithm. A spectral library of common urban materials, including urban vegetation, roofs and roads was assembled from combined AVIRIS and field-measured reflectance spectra. LST and emissivity were also retrieved from MASTER and reflectance/emissivity spectra for a subset of urban materials were retrieved from co-located MASTER and AVIRIS pixels. Fractions of Impervious, Soil, Green Vegetation (GV) and Non-photosynthetic Vegetation (NPV), were estimated using Multiple Endmember Spectral Mixture Analysis (MESMA) applied to AVIRIS data at 7.5, 15 and 60 m spatial scales. Surface energy parameters, including albedo, vegetation cover fraction, broadband emissivity and LST were also determined for urban and natural land-cover classes in the region. Fractions were validated using 1m digital photography.

Characterizing Intimate Mixtures of Materials in Hyperspectral Imagery with Albedo-based and Kernel-based Approaches

DTIC Science & Technology

2015-09-01

scattering albedo (SSA) according to Hapke theory assuming bidirectional scattering at nadir look angles and uses a constrained linear model on the computed...following Hapke 9 (1993); and Mustard and Pieters 18 (1987)) assuming the reflectance spectra are bidirectional . SSA spectra were also generated...from AVIRIS data collected during a JPL/USGS campaign in response to the Deep Water Horizon (DWH) oil spill incident. 27 Out of the numerous

Multiple Aspects of the Southern California Wildfires as Seen by NASA's AVIRIS

NASA Image and Video Library

2017-12-15

NASA's Airborne Visible Infrared Imaging Spectrometer instrument (AVIRIS), flying aboard a NASA Armstrong Flight Research Center high-altitude ER-2 aircraft, observed wildfires burning in Southern California on Dec. 5-7, 2017. AVIRIS is an imaging spectrometer that observes light in visible and infrared wavelengths, measuring the full spectrum of radiated energy. Unlike regular cameras with three colors, AVIRIS has 224 spectral channels, measuring contiguously from the visible through the shortwave infrared. Data from these flights, compared against measurements acquired earlier in the year, show many ways this one instrument can improve both our understanding of fire risk and the response to fires in progress. The top row in this image compilation shows pre-fire data acquired from June 2017. At top left is a visible-wavelength image similar to what our own eyes would see. The top middle image is a map of surface composition based on analyzing the full electromagnetic spectrum, revealing green vegetated areas and non-photosynthetic vegetation that is potential fuel as well as non-vegetated surfaces that may slow an advancing fire. The image at top right is a remote measurement of the water in tree canopies, a proxy for how much moisture is in the vegetation. The bottom row in the compilation shows data acquired from the Thomas fire in progress in December 2017. At bottom left is a visible wavelength image. The bottom middle image is an infrared image, with red at 2,250 nanometers showing fire energy, green at 1,650 nanometers showing the surface through the smoke, and blue at 1,000 nanometers showing the smoke itself. The image at bottom right is a fire temperature map using spectroscopic analysis to measure fire thermal emission recorded in the AVIRIS spectra. https://photojournal.jpl.nasa.gov/catalog/PIA22194

Mapped minerals at Questa, New Mexico, using airborne visible-infrared imaging spectrometer (AVIRIS) data -- Preliminary report

USGS Publications Warehouse

Livo, K. Eric; Clark, Roger N.

2002-01-01

This preliminary study for the First Quarterly Report has spectrally mapped hydrothermally altered minerals useful in assisting in assessment of water quality of the Red River. Airborne Visible-Infrared Imaging Spectrometer (AVIRIS) data was analyzed to characterize mined and unmined ground at Questa, New Mexico. AVIRIS data covers the Red River drainage north of the river, from between the town of Questa on the west, to east of the town of Red River. The data was calibrated and analyzed using U.S. Geological Survey custom software and spectral mineral library. AVIRIS data was tested for spectral features that matched similar features in the spectral mineral library. Goodness-of-fit and band-depth were calculated for each comparison of spectral features and used to identify surface mineralogy. Mineral distribution, mineral associations, and AVIRIS pixel spectra were examined. Mineral maps show the distribution of iron hydroxides, iron sulfates, clays, micas, carbonates, and other minerals. Initial results show a system of alteration suites that overprint each other. Quartz-sericite-pyrite (QSP) alteration grading out to propylitic alteration (epidote and calcite) was identified at the Questa Mine (molybdenum porphyry) and a similar alteration pattern was mapped at the landslide (?scar?) areas. Supergene weathering overprints the altered rock, as shown by jarosite, kaolinite, and gypsum. In the spectral analysis, hydrothermally altered ground appears to be more extensive at the unmined Goat Hill Gulch and the mined ground, than the ?scars? to the east. Though the ?scars? have similar overall altered mineral suites, there are differences between the ?scars? in sericite, kaolinite, jarosite, gypsum, and calcite abundance. Fieldwork has verified the results at the central unmined ?scar? areas.

Atmospheric Precorrected Differential Absorption technique to retrieve columnar water vapor

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schlaepfer, D.; Itten, K.I.; Borel, C.C.

1998-09-01

Differential absorption techniques are suitable to retrieve the total column water vapor contents from imaging spectroscopy data. A technique called Atmospheric Precorrected Differential Absorption (APDA) is derived directly from simplified radiative transfer equations. It combines a partial atmospheric correction with a differential absorption technique. The atmospheric path radiance term is iteratively corrected during the retrieval of water vapor. This improves the results especially over low background albedos. The error of the method for various ground reflectance spectra is below 7% for most of the spectra. The channel combinations for two test cases are then defined, using a quantitative procedure, whichmore » is based on MODTRAN simulations and the image itself. An error analysis indicates that the influence of aerosols and channel calibration is minimal. The APDA technique is then applied to two AVIRIS images acquired in 1991 and 1995. The accuracy of the measured water vapor columns is within a range of {+-}5% compared to ground truth radiosonde data.« less

AVIRIS spectra correlated with the chlorophyll concentration of a forest canopy

NASA Technical Reports Server (NTRS)

Kupiec, John; Smith, Geoffrey M.; Curran, Paul J.

1993-01-01

Imaging spectrometers have many potential applications in the environmental sciences. One of the more promising applications is that of estimating the biochemical concentrations of key foliar biochemicals in forest canopies. These estimates are based on spectroscopic theory developed in agriculture and could be used to provide the spatial inputs necessary for the modeling of forest ecosystem dynamics and productivity. Several foliar biochemicals are currently under investigation ranging from those with primary absorption features in visible to middle infrared wavelengths (e.g., water, chlorophyll) to those with secondary to tertiary absorption features in this part of the spectrum (e.g., nitrogen, lignin). The foliar chemical of interest in this paper is chlorophyll; this is a photoreceptor and catalyst for the conversion of sunlight into chemical energy and as such plays a vital role in the photochemical synthesis of carbohydrates in plants. The aim of the research reported here was to determine if the chlorophyll concentration of a forest canopy could be correlated with the reflectance spectra recorded by the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS).

Green vegetation, nonphotosynthetic vegetation, and soils in AVIRIS data

NASA Technical Reports Server (NTRS)

Roberts, D. A.; Smith, M. O.; Adams, J. B.

1993-01-01

The problem of distinguishing between green vegetation, nonphotosynthetic vegetation (NPV, such as dry grass, leaf litter, and woody material), and soils in imaging-spectrometer data is addressed by analyzing an image taken by the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) over the Jasper Ridge Biological Preserve (California) on September 20, 1989, using spectral mixture analysis. Over 98 percent of the spectral variation could be explained by linear mixtures of three endmembers, green vegetation, shade, and soil. NPV, which could not be distinguished from soil when included as an endmember, was discriminated by residual spectra that contained cellulose and lignin absorptions. Distinct communities of green vegetation were distinguished by (1) nonlinear mixing effect caused by transmission and scattering by green leaves, (2) variations in a derived canopy-shade spectrum, and (3) the fraction of NPV.

Estimating Surface Soil Moisture in Simulated AVIRIS Spectra

NASA Technical Reports Server (NTRS)

Whiting, Michael L.; Li, Lin; Ustin, Susan L.

2004-01-01

Soil albedo is influenced by many physical and chemical constituents, with moisture being the most influential on the spectra general shape and albedo (Stoner and Baumgardner, 1981). Without moisture, the intrinsic or matrix reflectance of dissimilar soils varies widely due to differences in surface roughness, particle and aggregate sizes, mineral types, including salts, and organic matter contents. The influence of moisture on soil reflectance can be isolated by comparing similar soils in a study of the effects that small differences in moisture content have on reflectance. However, without prior knowledge of the soil physical and chemical constituents within every pixel, it is nearly impossible to accurately attribute the reflectance variability in an image to moisture or to differences in the physical and chemical constituents in the soil. The effect of moisture on the spectra must be eliminated to use hyperspectral imagery for determining minerals and organic matter abundances of bare agricultural soils. Accurate soil mineral and organic matter abundance maps from air- and space-borne imagery can improve GIS models for precision farming prescription, and managing irrigation and salinity. Better models of soil moisture and reflectance will also improve the selection of soil endmembers for spectral mixture analysis.

Imaging Spectroscopy Enables Novel Applications and Continuity with the Landsat Record to Sustain Legacy Applications: An Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and Landsat 8 OLI Case Study

NASA Astrophysics Data System (ADS)

Stavros, E. N.; Seidel, F.; Cable, M. L.; Green, R. O.; Freeman, A.

2017-12-01

While, imaging spectrometers offer additional information that provide value added products for applications that are otherwise underserved, there is need to demonstrate their ability to augment the multi-spectral (e.g., Landsat) optical record by both providing more frequent temporal revisit and lengthening the existing record. Here we test the hypothesis that imaging spectroscopic optical data is compatible with multi-spectral data to within ±5% radiometric accuracy, as desirable to continue the long-term Landsat data record. We use a coincident Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) flight with over-passing Operational Land Imager (OLI) data on Landsat 8 to document a procedure for simulating OLI multi-spectral bands from AVIRIS, evaluate influencing factors on the observed radiance, and assess AVIRIS radiometric accuracy compared to OLI. The procedure for simulating OLI data includes spectral convolution, accounting for atmospheric effects introduced by different sensor altitude and viewing geometries, and spatial resampling. After accounting for these influences, we expect the remaining differences between the simulated and the real OLI data result from differences in sensor calibration, surface bi-directional reflectance, from the different viewing geometries, and spatial sampling. The median radiometric percent difference for each band in the data used range from 0.6% to 8.3%. After bias-correction to minimize potential calibration discrepancies, we find no more than 1.2% radiometric percent difference for any OLI band. This analysis therefore successfully demonstrates that imaging spectrometer data can not only address novel applications, but also contribute to the Landsat-type or other multi-spectral data records to sustain legacy applications.

Validation of Airborne Visible-Infrared Imaging Spectrometer Data at Ray Mine, AZ

NASA Technical Reports Server (NTRS)

Lang, H.; Baloga, S.

1999-01-01

We validate 1997 Airborne Visible-Infrared Imaging Spectrometer (AVIRIS) reflectance spectra covering 0.4 meu - 2.4 meu from a stable, flat mineralogically characterized man-made target at Ray Mine, AZ, the site for an EPA/NASA assessment of the utility of remote sensing for monitoring acid drainage from an active open pit mine.

Retrieval of Marine Water Constituents Using Atmospherically Corrected AVIRIS Hyperspectral Data

NASA Technical Reports Server (NTRS)

Bagheri, Sima; Peters, Steef

2004-01-01

This paper reports on the validation of bio-optical models in estuarine and nearshore (case 2) waters of New Jersey-New York to retrieve accurate water-leaving radiance spectra and chlorophyll concentration from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) imaging spectrometer data. MODTRAN-4 was applied to remove the effects of the atmosphere so as to infer the water-leaving radiance. The study area - Hudson/Raritan of New York and New Jersey (Figure 1) is an extremely complex estuarine system where tidal and wind-driven currents are modified by freshwater discharges from the Hudson, Raritan, Hackensack, and Passaic rivers. Over the last century, the estuarine water quality has degraded in part due to eutrophication, which has disrupted the preexisting natural balance, resulting in phytoplankton blooms of both increased frequency and intensity, increasing oxygen demand, and leading to episodes of hypoxia. As the end result, a thematic map of chlorophyll-a concentration was generated using an atmospherically corrected AVIRIS ratio image. This thematic map serves as an indication of phytoplankton concentration. Such maps are important input into the geographic information system (GIS) for use as a management tool for monitoring water resources.

Measuring the Spectral Expression of Carbon Dioxide in the Solar Reflected Spectrum with AVIRIS

NASA Technical Reports Server (NTRS)

Green, Robert O.

2001-01-01

Carbon dioxide is a low-concentration, but important, component of the Earth's atmosphere. This gas absorbs electromagnetic radiation (EMR) in several regions of the spectrum. Absorption of energy by carbon dioxide adds heat to the atmosphere. In the world today, the burning of fossil fuels and other anthropogenic processes adds carbon dioxide to the atmosphere. Other natural processes in the Earth's system both add and remove carbon dioxide. Overall, measurements of atmospheric carbon dioxide at selected sites around the globe show an increased carbon dioxide concentration in the atmosphere. A figure shows the measured carbon dioxide from Mauna Loa, Hawaii, from 1958 to 2000. Overall, the concentration has increased from 315 to 365 ppm at this site over this period. (There is also a yearly cycle to the concentration that is timed with and hypothesized to be related to the vegetation growing season in the Northern Hemisphere.) The overall expected effect of this increase of atmospheric carbon dioxide is trapping of heat in the atmosphere and global warming. While this overall relationship between carbon dioxide and global warming seems straightforward, many of the specific details relating to regional and local sources and sinks and gradients of carbon dioxide are not well understood. A remote sensing capability to measure carbon dioxide could provide important inputs for scientific research to better understand the distribution and change in atmospheric carbon dioxide at detailed spatial and temporal levels. In pursuit of this remote sensing of carbon dioxide objective, this paper analyzes the expression of carbon dioxide in the spectral range measured by the Airborne Visible/Infrared Imagery Spectrometer (AVIRIS). Based on these analyses, a spectral-fitting algorithm that uses AVIRIS measured spectra and MODTRAN radiative-transfer code modeled spectra to derive total column carbon dioxide abundance has been developed. This algorithm has been applied to an AVIRIS data set acquired over Pasadena, California, in 1999 and a data set acquired over the Pacific Ocean near Hawaii in 2000 with promising results. This is ongoing research; the current initial analyses, measurements, and results are reported in this paper.

Characterizing the Impacts of the Deepwater Horizon Oil Spill on Marshland Vegetation, Gulf Coast Louisiana, Using Airborne Imaging Spectroscopy

NASA Astrophysics Data System (ADS)

Kokaly, R. F.; Roberts, D. A.; Heckman, D.; Piazza, S.; Steyer, G.; Couvillion, B.; Holloway, J. M.; Mills, C. T.; Hoefen, T. M.

2010-12-01

Between April-July 2010 oil from the nation's largest oil spill contaminated the coastal marshlands of Louisiana. Data from the Airborne Visible/InfraRed Imaging Spectrometer (AVIRIS) are being used to (1) delineate the area of impact, (2) quantify the depth of oil penetration into the marsh and (3) characterize the physical and chemical impacts of the oil on the ecosystem. AVIRIS was flown on NASA ER-2 and Twin Otter aircraft, acquiring data at 7.5 and 4.4 meter pixel size, respectively. Concurrently, field surveys and sample collections were made in the imaged areas. Data were collected in early May, early July, late July and mid-August over the area ranging from Terrebonne Bay to the end of the Mississippi River delta. AVIRIS data were converted from radiance to reflectance. Oiled areas were detected by comparing AVIRIS spectra to field and laboratory spectrometer measurements of oiled and unaffected vegetation using the USGS Material Identification and Characterization Algorithm (MICA). Results indicate that the area in and around Barataria Bay was most extensively and heavily affected. In field surveys, stems of Spartina alterniflora and Juncus roemerianus, the dominant species observed in the heavily oiled zones, were bent and broken by the weight of the oil, resulting in a damaged canopy that extended up to 30 meters into marsh. In less impacted zones, oil was observed on the plant stems but the canopy remained intact. In the bird's foot region of the delta, the area impacted was less extensive and the dominant affected species, Phragmites australis, suffered oiled stems but only minor fracturing of the canopy. Additional AVIRIS flights and field surveys are planned for the fall of 2010 and summer 2011. By comparing plant species composition, canopy biochemical content, and vegetation fractional cover within affected areas and to unaffected areas, we will continue to monitor degradation and recovery in the ecosystem, including on the longer-term chemical impacts of the oil in the marsh.

Using endmembers in AVIRIS images to estimate changes in vegetative biomass

NASA Technical Reports Server (NTRS)

Smith, Milton O.; Adams, John B.; Ustin, Susan L.; Roberts, Dar A.

1992-01-01

Field techniques for estimating vegetative biomass are labor intensive, and rarely are used to monitor changes in biomass over time. Remote-sensing offers an attractive alternative to field measurements; however, because there is no simple correspondence between encoded radiance in multispectral images and biomass, it is not possible to measure vegetative biomass directly from AVIRIS images. Ways to estimate vegetative biomass by identifying community types and then applying biomass scalars derived from field measurements are investigated. Field measurements of community-scale vegetative biomass can be made, at least for local areas, but it is not always possible to identify vegetation communities unambiguously using remote measurements and conventional image-processing techniques. Furthermore, even when communities are well characterized in a single image, it typically is difficult to assess the extent and nature of changes in a time series of images, owing to uncertainties introduced by variations in illumination geometry, atmospheric attenuation, and instrumental responses. Our objective is to develop an improved method based on spectral mixture analysis to characterize and identify vegetative communities, that can be applied to multi-temporal AVIRIS and other types of images. In previous studies, multi-temporal data sets (AVIRIS and TM) of Owens Valley, CA were analyzed and vegetation communities were defined in terms of fractions of reference (laboratory and field) endmember spectra. An advantage of converting an image to fractions of reference endmembers is that, although fractions in a given pixel may vary from image to image in a time series, the endmembers themselves typically are constant, thus providing a consistent frame of reference.

Measuring cloud thermodynamic phase with shortwave infrared imaging spectroscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Thompson, David R.; McCubbin, Ian; Gao, Bo Cai

Shortwave Infrared imaging spectroscopy enables accurate remote mapping of cloud thermodynamic phase at high spatial resolution. We describe a measurement strategy to exploit signatures of liquid and ice absorption in cloud top apparent reflectance spectra from 1.4 to 1.8 μm. This signal is generally insensitive to confounding factors such as solar angles, view angles, and surface albedo. We first evaluate the approach in simulation and then apply it to airborne data acquired in the Calwater-2/ACAPEX campaign of Winter 2015. Here NASA’s “Classic” Airborne Visible Infrared Imaging Spectrometer (AVIRIS-C) remotely observed diverse cloud formations while the U.S. Department of Energy ARMmore » Aerial Facility G-1 aircraft measured cloud integral and microphysical properties in situ. Finally, the coincident measurements demonstrate good separation of the thermodynamic phases for relatively homogeneous clouds.« less

The impact of initialization procedures on unsupervised unmixing of hyperspectral imagery using the constrained positive matrix factorization

NASA Astrophysics Data System (ADS)

Masalmah, Yahya M.; Vélez-Reyes, Miguel

2007-04-01

The authors proposed in previous papers the use of the constrained Positive Matrix Factorization (cPMF) to perform unsupervised unmixing of hyperspectral imagery. Two iterative algorithms were proposed to compute the cPMF based on the Gauss-Seidel and penalty approaches to solve optimization problems. Results presented in previous papers have shown the potential of the proposed method to perform unsupervised unmixing in HYPERION and AVIRIS imagery. The performance of iterative methods is highly dependent on the initialization scheme. Good initialization schemes can improve convergence speed, whether or not a global minimum is found, and whether or not spectra with physical relevance are retrieved as endmembers. In this paper, different initializations using random selection, longest norm pixels, and standard endmembers selection routines are studied and compared using simulated and real data.

Relationships of soil, grass, and bedrock over the Kaweah serpentine melange through spectral mixture analysis of AVIRIS data

NASA Technical Reports Server (NTRS)

Mustard, John F.

1991-01-01

A linear mixing model is used to model the spectral variability of an AVIRIS scene from the western foothills of the Sierra Nevada and calibrate these radiance data to reflectance. Five spectral endmembers from the AVIRIS data, plus an ideal 'shade' endmember were required to model the continuum reflectance of each pixel in the image. Three of the endmembers were interpreted to model the surface constituents green vegetation, dry grass, and illumination. These are the main transient surface constituents that are expected to change with shifts in land use or climatic influences and viewing conditions ('shade' only). The spectral distinction between the other three endmembers is very small, yet the spatial distributions are coherent and interpretable. These distributions cross anthropogenic and vegetation boundaries and are best interpreted as different soil types. Comparison of the fraction images to the bedrock geology maps indicates that substrate composition must be a factor contributing to the spectral properties of these endmembers. Detailed examination of the reflectance spectra of the three soil endmembers reveals that differences in the amount of ferric and ferrous iron and/or organic constituents in the soils is largely responsible for the differences in spectral properties of these endmembers.

High spectral resolution remote sensing of canopy chemistry

NASA Technical Reports Server (NTRS)

Aber, John D.; Martin, Mary E.

1995-01-01

Near infrared laboratory spectra have been used for many years to determine nitrogen and lignin concentrations in plant materials. In recent years, similar high spectral resolution visible and infrared data have been available via airborne remote sensing instruments. Using data from NASA's Airborne visible/Infrared Imaging Spectrometer (AVIRIS) we attempt to identify spectral regions correlated with foliar chemistry at the canopy level in temperate forests.

A Fast Smoothing Algorithm for Post-Processing of Surface Reflectance Spectra Retrieved from Airborne Imaging Spectrometer Data

PubMed Central

Gao, Bo-Cai; Liu, Ming

2013-01-01

Surface reflectance spectra retrieved from remotely sensed hyperspectral imaging data using radiative transfer models often contain residual atmospheric absorption and scattering effects. The reflectance spectra may also contain minor artifacts due to errors in radiometric and spectral calibrations. We have developed a fast smoothing technique for post-processing of retrieved surface reflectance spectra. In the present spectral smoothing technique, model-derived reflectance spectra are first fit using moving filters derived with a cubic spline smoothing algorithm. A common gain curve, which contains minor artifacts in the model-derived reflectance spectra, is then derived. This gain curve is finally applied to all of the reflectance spectra in a scene to obtain the spectrally smoothed surface reflectance spectra. Results from analysis of hyperspectral imaging data collected with the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data are given. Comparisons between the smoothed spectra and those derived with the empirical line method are also presented. PMID:24129022

Land cover mapping at Alkali Flat and Lake Lucero, White Sands, New Mexico, USA using multi-temporal and multi-spectral remote sensing data

NASA Astrophysics Data System (ADS)

Ghrefat, Habes A.; Goodell, Philip C.

2011-08-01

The goal of this research is to map land cover patterns and to detect changes that occurred at Alkali Flat and Lake Lucero, White Sands using multispectral Landsat 7 Enhanced Thematic Mapper Plus (ETM+), Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER), Advanced Land Imager (ALI), and hyperspectral Hyperion and Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data. The other objectives of this study were: (1) to evaluate the information dimensionality limits of Landsat 7 ETM+, ASTER, ALI, Hyperion, and AVIRIS data with respect to signal-to-noise and spectral resolution, (2) to determine the spatial distribution and fractional abundances of land cover endmembers, and (3) to check ground correspondence with satellite data. A better understanding of the spatial and spectral resolution of these sensors, optimum spectral bands and their information contents, appropriate image processing methods, spectral signatures of land cover classes, and atmospheric effects are needed to our ability to detect and map minerals from space. Image spectra were validated using samples collected from various localities across Alkali Flat and Lake Lucero. These samples were measured in the laboratory using VNIR-SWIR (0.4-2.5 μm) spectra and X-ray Diffraction (XRD) method. Dry gypsum deposits, wet gypsum deposits, standing water, green vegetation, and clastic alluvial sediments dominated by mixtures of ferric iron (ferricrete) and calcite were identified in the study area using Minimum Noise Fraction (MNF), Pixel Purity Index (PPI), and n-D Visualization. The results of MNF confirm that AVIRIS and Hyperion data have higher information dimensionality thresholds exceeding the number of available bands of Landsat 7 ETM+, ASTER, and ALI data. ASTER and ALI data can be a reasonable alternative to AVIRIS and Hyperion data for the purpose of monitoring land cover, hydrology and sedimentation in the basin. The spectral unmixing analysis and dimensionality eigen analysis between the various datasets helped to uncover the most optimum spatial-spectral-temporal and radiometric-resolution sensor characteristics for remote sensing based on monitoring of seasonal land cover, surface water, groundwater, and alluvial sediment input changes within the basin. The results demonstrated good agreement between ground truth data and XRD analysis of samples, and the results of Matched Filtering (MF) mapping method.

Joint NASA/EPA AVIRIS Analysis in the Chesapeake Bay Region: Plans and Initial Results

NASA Technical Reports Server (NTRS)

Johnson, Lee; Stokely, Peter; Lobitz, Brad; Shelton, Gary

1998-01-01

NASA's Ames Research Center is performing an AVIRIS demonstration project in conjunction with the U. S. Environmental Protection Agency (Region 3). NASA and EPA scientists have jointly defined a Study Area in eastern Virginia to include portions of the Chesapeake Bay, southern Delmarva Peninsula, and the mouths of the York and James Rivers. Several environmental issues have been identified for study. These include, by priority: 1) water constituent analysis in the Chesapeake Bay, 2) mapping of submerged aquatic vegetation in the Bay, 3) detection of vegetation stress related to Superfund sites at the Yorktown Naval Weapons Station, and 4) wetland species analysis in the York River vicinity. In support of this project, three lines of AVIRIS data were collected during the Wallops Island deployment on 17 August 1997. The remote sensing payload included AVIRIS, MODIS Airborne Simulator and an RC-10 color infrared film camera. The AVIRIS data were delivered to Ames from the JPL AVIRIS Data Facility, on 29 September 1997. Quicklook images indicate nominal data acquisition, and at the current time an atmospheric correction is being applied. Water constituent analysis of the Bay is our highest priority based on EPA interest and available collateral data, both from the surface and from other remote sensing instruments. Constituents of interest include suspended sediments, chlorophyll-a and accessory pigments, Analysis steps will include: verification of data quality, location of study sites in imagery, incorporation of relevant field data from EPA and other Chesapeake Bay cooperators, processing of imagery to show phenomenon of interest, verification of results with cooperators. By 1st quarter CY98 we plan to circulate initial results to NASA and EPA management for review. In the longer term we will finalize documentation, prepare results for publication, and complete any needed technology transfer to EPA remote sensing personnel.

The data facility of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS)

NASA Technical Reports Server (NTRS)

Nielsen, Pia J.; Green, Robert O.; Murray, Alex T.; Eng, Bjorn T.; Novack, H. Ian; Solis, Manuel; Olah, Martin

1993-01-01

AVIRIS operations at the Jet Propulsion Laboratory include a significant data task. The AVIRIS data facility is responsible for data archiving, data calibration, quality monitoring and distribution. Since 1987, the data facility has archived over one terabyte of AVIRIS data and distributed these data to science investigators as requested. In this paper we describe recent improvements in the AVIRIS data facility.

Unmixing of spectral components affecting AVIRIS imagery of Tampa Bay

NASA Astrophysics Data System (ADS)

Carder, Kendall L.; Lee, Z. P.; Chen, Robert F.; Davis, Curtiss O.

1993-09-01

According to Kirk's as well as Morel and Gentili's Monte Carlo simulations, the popular simple expression, R approximately equals 0.33 bb/a, relating subsurface irradiance reflectance (R) to the ratio of the backscattering coefficient (bb) to absorption coefficient (a), is not valid for bb/a > 0.25. This means that it may no longer be valid for values of remote-sensing reflectance (above-surface ratio of water-leaving radiance to downwelling irradiance) where Rrs4/ > 0.01. Since there has been no simple Rrs expression developed for very turbid waters, we developed one based in part on Monte Carlo simulations and empirical adjustments to an Rrs model and applied it to rather turbid coastal waters near Tampa Bay to evaluate its utility for unmixing the optical components affecting the water- leaving radiance. With the high spectral (10 nm) and spatial (20 m2) resolution of Airborne Visible-InfraRed Imaging Spectrometer (AVIRIS) data, the water depth and bottom type were deduced using the model for shallow waters. This research demonstrates the necessity of further research to improve interpretations of scenes with highly variable turbid waters, and it emphasizes the utility of high spectral-resolution data as from AVIRIS for better understanding complicated coastal environments such as the west Florida shelf.

Mapping Environmental Contaminants at Ray Mine, AZ

NASA Technical Reports Server (NTRS)

McCubbin, Ian; Lang, Harold

2000-01-01

Airborne Visible and InfraRed Imaging Spectrometer (AVIRIS) data was collected over Ray Mine as part of a demonstration project for the Environmental Protection Agency (EPA) through the Advanced Measurement Initiative (AMI). The overall goal of AMI is to accelerate adoption and application of advanced measurement technologies for cost effective environmental monitoring. The site was selected to demonstrate the benefit to EPA in using advanced remote sensing technologies for the detection of environmental contaminants due to the mineral extraction industry. The role of the Jet Propulsion Laboratory in this pilot study is to provide data as well as performing calibration, data analysis, and validation of the AVIRIS results. EPA is also interested in developing protocols that use commercial software to perform such work on other high priority EPA sites. Reflectance retrieval was performed using outputs generated by the MODTRAN radiative transfer model and field spectra collected for the purpose of calibration. We are presenting advanced applications of the ENVI software package using n-Dimensional Partial Unmixing to identify image-derived endmembers that best match target materials reference spectra from multiple spectral libraries. Upon identification of the image endmembers the Mixture Tuned Match Filter algorithm was applied to map the endmembers within each scene. Using this technique it was possible to map four different mineral classes that are associated with mine generated acid waste.

Initial vegetation species and senescience/stress indicator mapping in the San Luis Valley, Colorado using imaging spectrometer data

NASA Technical Reports Server (NTRS)

Clark, Roger N.; King, Trude V. V.; Ager, Cathy; Swayze, Gregg A.

1995-01-01

We analyzed AVIRIS data obtained over agricultural areas in the San Luis Valley of Colorado. The data were acquired on September 3, 1993. A combined method of radiative transfer modeling and ground calibration site reflectance was used to correct the flight data to surface reflectance. This method, called Radiative Transfer Ground Calibration, or RTGC, corrects for variable water vapor in the atmosphere and produces spectra free of artifacts with spectral channel to channel noise approaching the signal to noise of the raw data. The calibration site soil samples were obtained on the day of the overflight and measured on our laboratory spectrometer. The site was near the center of the AVIRIS scene and the spectra of the soil is spectrally bland, especially in the region of the chlorophyll absorption in the visible portion of the spectrum. The center of the scene is located at approximately 106 deg 03' longitude, 37 deg 23' latitude, and the scene covers about 92 square kilometers. This scene is one of 28 in the area for a general project to study the Summitville abandoned mine site, located in the mountains west of the San Luis Valley, and its effects on the surrounding environment.

Airborne Visible/Infrared Imaging Spectrometer (AVIRIS): Sensor improvements for 1994 and 1995

NASA Technical Reports Server (NTRS)

Sarture, C. M.; Chrien, T. G.; Green, R. O.; Eastwood, M. L.; Raney, J. J.; Hernandez, M. A.

1995-01-01

AVIRIS is a NASA-sponsored Earth-remote-sensing imaging spectrometer designed, built and operated by the Jet Propulsion Laboratory (JPL). While AVIRIS has been operational since 1989, major improvements have been completed in most of the sensor subsystems during the winter maintenance cycles. As a consequence of these efforts, the capabilities of AVIRIS to reliably acquire and deliver consistently high quality, calibrated imaging spectrometer data continue to improve annually, significantly over those in 1989. Improvements to AVIRIS prior to 1994 have been described previously. This paper details recent and planned improvements to AVIRIS in the sensor task.

Vegetation species composition and canopy architecture information expressed in leaf water absorption measured in the 1000 nm and 2200 spectral region by an imaging spectrometer

NASA Technical Reports Server (NTRS)

Green, Robert O.; Roberts, Dar A.

1995-01-01

Plant species composition and plant architectural attributes are critical parameters required for the measuring, monitoring, and modeling of terrestrial ecosystems. Remote sensing is commonly cited as an important tool for deriving vegetation properties at an appropriate scale for ecosystem studies, ranging from local to regional and even synoptic scales. Classical approaches rely on vegetation indices such as the normalized difference vegetation index (NDVI) to estimate biophysical parameters such as leaf area index or intercepted photosynthetically active radiation (IPAR). Another approach is to apply a variety of classification schemes to map vegetation and thus extrapolate fine-scale information about specific sites to larger areas of similar composition. Imaging spectrometry provides additional information that is not obtainable through broad-band sensors and that may provide improved inputs both to direct biophysical estimates as well as classification schemes. Some of this capability has been demonstrated through improved discrimination of vegetation, estimates of canopy biochemistry, and liquid water estimates from vegetation. We investigate further the potential of leaf water absorption estimated from Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data as a means for discriminating vegetation types and deriving canopy architectural information. We expand our analysis to incorporate liquid water estimates from two spectral regions, the 1000-nm region and the 2200-nm region. The study was conducted in the vicinity of Jasper Ridge, California, which is located on the San Francisco peninsula to the west of the Stanford University campus. AVIRIS data were acquired over Jasper Ridge, CA, on June 2, 1992, at 19:31 UTC. Spectra from three sites in this image were analyzed. These data are from an area of healthy grass, oak woodland, and redwood forest, respectively. For these analyses, the AVIRIS-measured upwelling radiance spectra for the entire Jasper Ridge scene were transformed to apparent surface reflectance using a radiative transfer code-based inversion algorithm.

AVIRIS and TIMS data processing and distribution at the land processes distributed active archive center

NASA Technical Reports Server (NTRS)

Mah, G. R.; Myers, J.

1993-01-01

The U.S. Government has initiated the Global Change Research program, a systematic study of the Earth as a complete system. NASA's contribution of the Global Change Research Program is the Earth Observing System (EOS), a series of orbital sensor platforms and an associated data processing and distribution system. The EOS Data and Information System (EOSDIS) is the archiving, production, and distribution system for data collected by the EOS space segment and uses a multilayer architecture for processing, archiving, and distributing EOS data. The first layer consists of the spacecraft ground stations and processing facilities that receive the raw data from the orbiting platforms and then separate the data by individual sensors. The second layer consists of Distributed Active Archive Centers (DAAC) that process, distribute, and archive the sensor data. The third layer consists of a user science processing network. The EOSDIS is being developed in a phased implementation. The initial phase, Version 0, is a prototype of the operational system. Version 0 activities are based upon existing systems and are designed to provide an EOSDIS-like capability for information management and distribution. An important science support task is the creation of simulated data sets for EOS instruments from precursor aircraft or satellite data. The Land Processes DAAC, at the EROS Data Center (EDC), is responsible for archiving and processing EOS precursor data from airborne instruments such as the Thermal Infrared Multispectral Scanner (TIMS), the Thematic Mapper Simulator (TMS), and Airborne Visible and Infrared Imaging Spectrometer (AVIRIS). AVIRIS, TIMS, and TMS are flown by the NASA-Ames Research Center ARC) on an ER-2. The ER-2 flies at 65000 feet and can carry up to three sensors simultaneously. Most jointly collected data sets are somewhat boresighted and roughly registered. The instrument data are being used to construct data sets that simulate the spectral and spatial characteristics of the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) instrument scheduled to be flown on the first EOS-AM spacecraft. The ASTER is designed to acquire 14 channels of land science data in the visible and near-IR (VNIR), shortwave-IR (SWIR), and thermal-IR (TIR) regions from 0.52 micron to 11.65 micron at high spatial resolutions of 15 m to 90 m. Stereo data will also be acquired in the VNIR region in a single band. The AVIRIS and TMS cover the ASTER VNIR and SWIR bands, and the TIMS covers the TIR bands. Simulated ASTER data sets have been generated over Death Valley, California, Cuprite, Nevada, and the Drum Mountains, Utah using a combination of AVIRIS, TIMS, amd TMS data, and existing digital elevation models (DEM) for the topographic information.

Measurement of water colour using AVIRIS imagery to assess the potential for an operational monitoring capability in the Pamlico Sound Estuary, USA

PubMed Central

Ross, S. Lunetta; Joseph, F. Knight; Hans, W. Paerl; John, J. Streicher; Benjamin, L. Peierls; Tom, Gallo; John, G. Lyon; Thomas, H. Mace; Christopher, P. Buzzelli

2009-01-01

The monitoring of water colour parameters can provide an important diagnostic tool for the assessment of aquatic ecosystem condition. Remote sensing has long been used to effectively monitor chlorophyll concentrations in open ocean systems; however, operational monitoring in coastal and estuarine areas has been limited because of the inherent complexities of coastal systems, and the coarse spectral and spatial resolutions of available satellite systems. Data were collected using the National Aeronautics and Space Administration (NASA) Advanced Visible-Infrared Imaging Spectrometer (AVIRIS) flown at an altitude of approximately 20000 m to provide hyperspectral imagery and simulate both MEdium Resolution Imaging Spectrometer (MERIS) and Moderate Resolution Imaging Spectrometer (MODIS) data. AVIRIS data were atmospherically corrected using a radiative transfer modelling approach and analysed using band ratio and linear regression models. Regression analysis was performed with simultaneous field measurements data in the Neuse River Estuary (NRE) and Pamlico Sound on 15 May 2002. Chlorophyll a (Chl a) concentrations were optimally estimated using AVIRIS bands (9.5 nm) centred at 673.6 and 692.7 nm, resulting in a coefficient of determination (R2) of 0.98. Concentrations of Chromophoric Dissolved Organic Matter (CDOM), Total Suspended Solids (TSS) and Fixed Suspended Solids (FSS) were also estimated, resulting in coefficients of determination of R2=0.90, 0.59 and 0.64, respectively. Ratios of AVIRIS bands centred at or near those corresponding to the MERIS and MODIS sensors indicated that relatively good satellite-based estimates could potentially be derived for water colour constituents at a spatial resolution of 300 and 500 m, respectively. PMID:25937680

California Drought Effects on Sierra Trees Mapped by NASA

NASA Image and Video Library

2016-06-27

California, reveals the devastating effect of California's ongoing drought on Sierra Nevada conifer forests. The map will be used to help the U.S. Forest Service assess and respond to the impacts of increased tree mortality caused by the drought, particularly where wildlands meet urban areas within the Sierra National Forest. After several years of extreme drought, the highly stressed conifers (trees or bushes that produce cones and are usually green year-round) of the Sierra Nevada are now more susceptible to bark beetles (Dendroctonus spp.). While bark beetles killing trees in the Sierra Nevada is a natural phenomenon, the scale of mortality in the last couple of years is far greater than previously observed. The U.S. Forest Service is using recent airborne spectroscopic measurements from NASA's Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) instrument aboard NASA's ER-2 aircraft, together with new advanced algorithms, to quantify this impact over this large region of rugged terrain. The high-altitude ER-2 aircraft is based at NASA's Armstrong Flight Research Center, Edwards, California. The image was created by scientists at the USFS's Pacific Southwest Region Remote Sensing Lab, McClellan, California, by performing a time series analysis of AVIRIS images. Scientists evaluated baseline tree mortality on public lands in the summer of 2015 using a machine learning algorithm called "random forest." This algorithm classifies the AVIRIS measurements as dominated by either shrubs, healthy trees or newly dead conifer trees. To quantify how much the amount of dead vegetation increased during the fall of 2015, the Forest Service scientists conducted an advanced spectral mixture analysis. This analysis evaluates each spectrum to determine the fraction of green vegetation, dead vegetation and soil. The full spectral range of AVIRIS is important to separate the signatures of soil and dead vegetation. To produce this comprehensive Sierra National Forest tree mortality map, the result from the summer of 2015 was evaluated to look for increases of more than 10 percent in dead vegetation during the fall of 2015. AVIRIS measures spectra of the Earth system to conduct advanced science research. These western U.S. AVIRIS measurements were acquired as part of NASA's Hyperspectral Infrared Imager (HyspIRI) preparatory airborne campaign. HyspIRI was one of the space missions suggested to NASA by the National Academy of Sciences in its 2007 decadal survey for Earth Science. In the future, HyspIRI could provide spectral and thermal measurements of this type globally for ecosystem research and additional science objectives. http://photojournal.jpl.nasa.gov/catalog/PIA20717

Using dark current data to estimate AVIRIS noise covariance and improve spectral analyses

NASA Technical Reports Server (NTRS)

Boardman, Joseph W.

1995-01-01

Starting in 1994, all AVIRIS data distributions include a new product useful for quantification and modeling of the noise in the reported radiance data. The 'postcal' file contains approximately 100 lines of dark current data collected at the end of each data acquisition run. In essence this is a regular spectral-image cube, with 614 samples, 100 lines and 224 channels, collected with a closed shutter. Since there is no incident radiance signal, the recorded DN measure only the DC signal level and the noise in the system. Similar dark current measurements, made at the end of each line are used, with a 100 line moving average, to remove the DC signal offset. Therefore, the pixel-by-pixel fluctuations about the mean of this dark current image provide an excellent model for the additive noise that is present in AVIRIS reported radiance data. The 61,400 dark current spectra can be used to calculate the noise levels in each channel and the noise covariance matrix. Both of these noise parameters should be used to improve spectral processing techniques. Some processing techniques, such as spectral curve fitting, will benefit from a robust estimate of the channel-dependent noise levels. Other techniques, such as automated unmixing and classification, will be improved by the stable and scene-independence noise covariance estimate. Future imaging spectrometry systems should have a similar ability to record dark current data, permitting this noise characterization and modeling.

Synthetic Scene Generation of the Stennis V and V Target Range for the Calibration of Remote Sensing Systems

NASA Technical Reports Server (NTRS)

Cao, Chang-Yong; Blonski, Slawomir; Ryan, Robert; Gasser, Jerry; Zanoni, Vicki

1999-01-01

The verification and validation (V&V) target range developed at Stennis Space Center is a useful test site for the calibration of remote sensing systems. In this paper, we present a simple algorithm for generating synthetic radiance scenes or digital models of this target range. The radiation propagation for the target in the solar reflective and thermal infrared spectral regions is modeled using the atmospheric radiative transfer code MODTRAN 4. The at-sensor, in-band radiance and spectral radiance for a given sensor at a given altitude is predicted. Software is developed to generate scenes with different spatial and spectral resolutions using the simulated at-sensor radiance values. The radiometric accuracy of the simulation is evaluated by comparing simulated with AVIRIS acquired radiance values. The results show that in general there is a good match between AVIRIS sensor measured and MODTRAN predicted radiance values for the target despite the fact that some anomalies exist. Synthetic scenes provide a cost-effective way for in-flight validation of the spatial and radiometric accuracy of the data. Other applications include mission planning, sensor simulation, and trade-off analysis in sensor design.

A layered approach to technology transfer of AVIRIS between Earth Search Sciences, Inc. and the Idaho National Engineering Laboratory

NASA Technical Reports Server (NTRS)

Ferguson, James S.; Ferguson, Joanne E.; Peel, John, III; Vance, Larry

1995-01-01

Since initial contact between Earth Search Sciences, Inc. (ESSI) and the Idaho National Engineering Laboratory (INEL) in February, 1994, at least seven proposals have been submitted in response to a variety of solicitations to commercialize and improve the AVIRIS instrument. These proposals, matching ESSI's unique position with respect to agreements with the National Aeronautics and Space Administration (NASA) and the Jet Propulsion Laboratory (JPL) to utilize, miniaturize, and commercialize the AVIRIS instrument and platform, are combined with the applied engineering of the INEL. Teaming ESSI, NASA/JPL, and INEL with diverse industrial partners has strengthened the respective proposals. These efforts carefully structure the overall project plans to ensure the development, demonstration, and deployment of this concept to the national and international arenas. The objectives of these efforts include: (1) developing a miniaturized commercial, real-time, cost effective version of the AVIRIS instrument; (2) identifying multiple users for AVIRIS; (3) integrating the AVIRIS technology with other technologies; (4) gaining the confidence/acceptance of other government agencies and private industry in AVIRIS; and (5) increasing the technology base of U.S. industry.

Evaluation of spatial productivity patterns in an annual grassland during an AVIRIS overflight

NASA Technical Reports Server (NTRS)

Gamon, John A.; Field, Christopher B.; Ustin, Susan L.

1992-01-01

In May 1991, coincident with an Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) overflight, a ground-based study covering 9 hectares of an annual grassland was completed. There were two goals of this ground study: (1) obtain ecologically and physiologically meaningful data for relating AVIRIS images to canopy structure, biochemistry, and physiology; and (2) evaluate the suitability of the 20-m AVIRIS pixel size for depicting detailed spatial patterns of productivity.

AVIRIS data quality for coniferous canopy chemistry

NASA Technical Reports Server (NTRS)

Swanberg, Nancy A.

1988-01-01

An assessment of AVIRIS data quality for studying coniferous canopy chemistry was made. Seven flightlines of AVIRIS data were acquired over a transect of coniferous forest sites in central Oregon. Both geometric and radiometric properties of the data were examined including: pixel size, swath width, spectral position and signal-to-noise ratio. A flat-field correction was applied to AVIRIS data from a coniferous forest site. Future work with this data set will exclude data from spectrometers C and D due to low signal-to-noise ratios. Data from spectrometers A and B will be used to examine the relationship between the canopy chemical composition of the forest sites and AVIRIS spectral response.

Exploring the remote sensing of foliar biochemical concentrations with AVIRIS data

NASA Technical Reports Server (NTRS)

Smith, Geoffrey M.; Curran, Paul J.

1992-01-01

Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data shows promise for the estimation of foliar biochemical concentrations at the scale of the canopy. There are, however, several problems associated with the use of AVIRIS data in this way and these are detailed in recent Plant Biochemical Workshop Report. The research reported was concentrated upon three of these problems: field sampling of forest canopies, wet laboratory assay of foliar chemicals, and the visualization of AVIRIS data.

Water Vapor Sensitivity Analysis for AVIRIS Radiactive-Transfer-Model-Based Reflectance Inversion

NASA Technical Reports Server (NTRS)

Green, R.

2000-01-01

As with other imaging spectrometers, AVIRIS measures the upwelling specral radiance incident at the sensor. Most research and applications objectives for AVIRIS are based on the molecular absorption and scattering features expressed in the surface reflectance.

AVIRIS data calibration information: Wasatch Mountains and Park City region, Utah

USGS Publications Warehouse

Rockwell, Barnaby W.; Clark, Roger N.; Livo, K. Eric; McDougal, Robert R.; Kokaly, Raymond F.

2002-01-01

This report contains information regarding the reflectance calibration of spectroscopic imagery acquired over the Wasatch Mountains and Park City region, Utah, by the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) sensor on August 5, 1998. This information was used by the USGS Spectroscopy Laboratory to calibrate the Park City AVIRIS imagery to unitless reflectance prior to spectral analysis.  The Utah AVIRIS data were analyzed as a part of the USEPA-USGS Utah Abandoned Mine Lands Imaging Spectroscopy Project.

Sub-pixel localization of highways in AVIRIS images

NASA Technical Reports Server (NTRS)

Salu, Yehuda

1995-01-01

Roads and highways show up clearly in many bands of AVIRIS images. A typical lane in the U.S. is 12 feet wide, and the total width of a four lane highway, including 18 feet of paved shoulders, is 19.8 m. Such a highway will cover only a portion of any 20x20 m AVIRIS pixel that it traverses. The other portion of these pixels wil be usually covered by vegetation. An interesting problem is to precisely determine the location of a highway within the AVIRIS pixels that it traverses. This information may be used for alignment and spatial calibration of AVIRIS images. Also, since the reflection properties of highway surfaces do not change with time, and they can be determined once and for all, such information can be of help in calculating and filtering out the atmospheric noise that contaminates AVIRIS measurements. The purpose of this report is to describe a method for sub-pixel localization of highways.

Estimating Expressed Temperature and Fractional Area of Hot Lava at the Kilauea Vent with AVIRIS Spectral Measurements

NASA Technical Reports Server (NTRS)

Green, Robert O.

2001-01-01

Imaging spectroscopy offers a framework based in physics and chemistry for scientific investigation of a wide range of phenomena of interest in the Earth environment. In the scientific discipline of volcanology knowledge of lava temperature and distribution at the surface provides insight into the volcano status and subsurface processes. A remote sensing strategy to measure surface lava temperatures and distribution would support volcanology research. Hot targets such as molten lava emit spectral radiance as a function of temperature. A figure shows a series of Planck functions calculated radiance spectra for hot targets at different temperatures. A maximum Lambertian solar reflected radiance spectrum is shown as well. While similar in form, each hot target spectrum has a unique spectral shape and is distinct from the solar reflected radiance spectrum. Based on this temperature-dependent signature, imaging spectroscopy provides an innovative approach for the remote-sensing-based measurement of lava temperature. A natural site for investigation of the measurement of lava temperature is the Big Island of Hawaii where molten lava from the Kilauea vent is present at the surface. In the past, Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data sets have been used for the analysis of hot volcanic targets and hot burning fires. The research presented here builds upon and extends this earlier work. The year 2000 Hawaii AVIRIS data set has been analyzed to derive lava temperatures taking into account factors of fractional fill, solar reflected radiance, and atmospheric attenuation of the surface emitted radiance. The measurements, analyses, and current results for this research are presented here.

Improved Remote Sensing Retrieval of Land Surface Temperature in the Thermal Infrared (TIR) Using Visible/Short Wave Infrared (VSWIR) Imaging Spectrometer Estimated Water Vapor

NASA Astrophysics Data System (ADS)

Grigsby, S.; Hulley, G. C.; Roberts, D. A.; Scheele, C. J.; Ustin, S.; Alsina, M. M.

2014-12-01

Land surface temperature (LST) is an important parameter in many ecological studies, where processes such as evapotranspiration have impacts at temperature gradients less than 1 K. Current errors in standard MODIS and ASTER LST products are greater than 1 K, and for ASTER can be greater than 2 K in humid conditions due to incomplete atmospheric correction of atmospheric water vapor. Estimates of water vapor, either derived from visible-to-shortwave-infrared (VSWIR) remote sensing data or taken from weather simulation data such as NCEP, can be combined with coincident Thermal-Infrared (TIR) remote sensing data to yield improved accuracy in LST measurements. This study compares LST retrieval accuracies derived using the standard JPL MASTER Temperature Emissivity Separation (TES) algorithm, and the Water Vapor Scaling (WVS) atmospheric correction method proposed for the Hyperspectral Infrared Imager, or HyspIRI, mission with ground observations. The 2011 ER-2 Delano/Lost Hills flights acquired TIR data from the MODIS/ASTER Simulator (MASTER) and VSWIR data from Airborne Visible InfraRed Imaging Spectrometer (AVIRIS) instruments flown concurrently. The TES and WVS retrieval methods are run with and without high spatial resolution AVIRIS-derived water vapor maps to assess the improvement using VSWIR water vapor estimates. We find improvement using VSWIR derived water vapor maps in both cases, with the WVS method being most accurate overall. For closed canopy agricultural vegetation we observed canopy temperature retrieval RMSEs of 0.49 K and 0.70 K using the WVS method on MASTER data with and without AVIRIS derived water vapor, respectively.

Assessment of AVIRIS data from vegetated sites in the Owens Valley, California

NASA Technical Reports Server (NTRS)

Rock, B. N.; Elvidge, Christopher D.; Defeo, N. J.

1988-01-01

Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data were acquired from the Bishop, CA area, located at the northern end of the Owens Valley, on July 30, 1987. Radiometrically-corrected AVIRIS data were flat-field corrected, and spectral curves produced and analyzed for pixels taken from both native and cultivated vegetation sites, using the JPS SPAM software program and PC-based spreadsheet programs. Analyses focussed on the chlorophyll well and red edge portions of the spectral curves. Results include the following: AVIRIS spectral data are acquired at sufficient spectral resolution to allow detection of blue shifts of both the chlorophyll well and red edge in moisture-stressed vegetation when compared with non-stressed vegetation; a normalization of selected parameters (chlorophyll well and near infrared shoulder) may be used to emphasize the shift in red edge position; and the presence of the red edge in AVIRIS spectral curves may be useful in detecting small amounts (20 to 30 pct cover) of semi-arid and arid vegetation ground cover. A discussion of possible causes of AVIRIS red edge shifts in respsonse to stress is presented.

Remote sensing for environmental site screening and watershed evaluation in Utah Mine lands - East Tintic mountains, Oquirrh mountains, and Tushar mountains

USGS Publications Warehouse

Rockwell, Barnaby W.; McDougal, Robert R.; Gent, Carol A.

2005-01-01

Imaging spectroscopy-a powerful remote-sensing tool for mapping subtle variations in the composition of minerals, vegetation, and man-made materials on the Earth's surface-was applied in support of environmental assessments and watershed evaluations in several mining districts in the State of Utah. Three areas were studied through the use of Landsat 7 ETM+ and Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data: (1) the Tintic mining district in the East Tintic Mountains southwest of Provo, (2) the Camp Floyd mining district (including the Mercur mine) and the Stockton (or Rush Valley) mining district in the Oquirrh Mountains south of the Great Salt Lake, and (3) the Tushar Mountains and Antelope Range near Marysvale. The Landsat 7 ETM+ data were used for initial site screening and the planning of AVIRIS surveys. The AVIRIS data were analyzed to create spectrally defined maps of surface minerals with special emphasis on locating and characterizing rocks and soils with acid-producing potential (APP) and acid-neutralizing potential (ANP). These maps were used by the United States Environmental Protection Agency (USEPA) for three primary purposes: (1) to identify unmined and anthropogenic sources of acid generation in the form of iron sulfide and (or) ferric iron sulfate-bearing minerals such as jarosite and copiapite; (2) to seek evidence for downstream or downwind movement of minerals associated with acid generation, mine waste, and (or) tailings from mines, mill sites, and zones of unmined hydrothermally altered rocks; and (3) to identify carbonate and other acid-buffering minerals that neutralize acidic, potentially metal bearing, solutions and thus mitigate potential environmental effects of acid generation. Calibrated AVIRIS surface-reflectance data were spectrally analyzed to identify and map selected surface materials. Two maps were produced from each flightline of AVIRIS data: a map of iron-bearing minerals and water having absorption features in the spectral region from 0.35 ?m to 1.35 ?m and a map of minerals (including clays, sulfates, micas, and carbonates) having absorptions in the spectral region from 1.45 ?m to 2.51 ?m. Several methods were used to verify the AVIRIS mapping results, including field checking of selected locations with a portable spectrometer, visual inspection of the AVIRIS reflectance spectra, and X-ray diffraction (XRD) analysis of field samples. The maps of iron-bearing minerals derived from analysis of the visible (VIS) and near-infrared (NIR) regions of the electromagnetic spectrum were shown to be more consistently reliable in indicating the presence of jarosite than were the maps generated from analysis of the short-wave infrared (SWIR) region. When present in abundance, phyllosilicate minerals tend to dominate the SWIR and mask the spectral features of jarosite in that wavelength region. The crystal field absorptions of jarosite in the VIS and NIR spectral regions will commonly be present regardless of whether the Fe-OH absorption feature near 2.27 ?m can be detected. For this reason, the VIS and NIR were preferable to the SWIR for the remote spectroscopic identification of jarosite (and other iron-bearing minerals). Large exposures of unmined hydrothermally altered rocks occur throughout the three study areas. These rocks commonly contain sulfide or sulfate minerals that produce sulfuric acid upon subaerial oxidation. The acid may be introduced into local surface and ground water and thus lower the baseline (that is, the premining) pH for a watershed. The three study areas also have widespread exposures of rocks with acid-neutralizing potential. Lithologies containing carbonates and (or) other acid-buffering minerals-such as sedimentary limestones and dolomites and propylitically altered igneous rocks-were mapped with the AVIRIS data throughout the Oquirrh and East Tintic Mountains and locally in the Antelope Range and Tushar Mountains. Because elevated levels o

Case Studies of Water Vapor and Surface Liquid Water from AVIRIS Data Measured Over Denver, CO and Death Valley, CA

NASA Technical Reports Server (NTRS)

Gao, B.-C.; Kierein-Young, K. S.; Goetz, A. F. H.; Westwater, E. R.; Stankov, B. B.; Birkenheuer, D.

1991-01-01

High spatial resolution column atmospheric water vapor amounts and equivalent liquid water thicknesses of surface targets are retrieved from spectral data collected by the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS). The retrievals are made using a nonlinear least squares curve fitting technique. Two case studies from AVIRIS data acquired over Denver-Platteville area, Colorado and over Death Valley, California are presented. The column water vapor values derived from AVIRIS data over the Denver-Platteville area are compared with those obtained from radiosondes, ground level upward-looking microwave radiometers, and geostationary satellite measurements. The column water vapor image shows spatial variation patterns related to the passage of a weather front system. The column water vapor amounts derived from AVIRIS data over Death Valley decrease with increasing surface elevation. The derived liquid water image clearly shows surface drainage patterns.

Mapping and monitoring changes in vegetation communities of Jasper Ridge, CA, using spectral fractions derived from AVIRIS images

NASA Technical Reports Server (NTRS)

Sabol, Donald E., Jr.; Roberts, Dar A.; Adams, John B.; Smith, Milton O.

1993-01-01

An important application of remote sensing is to map and monitor changes over large areas of the land surface. This is particularly significant with the current interest in monitoring vegetation communities. Most of traditional methods for mapping different types of plant communities are based upon statistical classification techniques (i.e., parallel piped, nearest-neighbor, etc.) applied to uncalibrated multispectral data. Classes from these techniques are typically difficult to interpret (particularly to a field ecologist/botanist). Also, classes derived for one image can be very different from those derived from another image of the same area, making interpretation of observed temporal changes nearly impossible. More recently, neural networks have been applied to classification. Neural network classification, based upon spectral matching, is weak in dealing with spectral mixtures (a condition prevalent in images of natural surfaces). Another approach to mapping vegetation communities is based on spectral mixture analysis, which can provide a consistent framework for image interpretation. Roberts et al. (1990) mapped vegetation using the band residuals from a simple mixing model (the same spectral endmembers applied to all image pixels). Sabol et al. (1992b) and Roberts et al. (1992) used different methods to apply the most appropriate spectral endmembers to each image pixel, thereby allowing mapping of vegetation based upon the the different endmember spectra. In this paper, we describe a new approach to classification of vegetation communities based upon the spectra fractions derived from spectral mixture analysis. This approach was applied to three 1992 AVIRIS images of Jasper Ridge, California to observe seasonal changes in surface composition.

Instantaneous field of view and spatial sampling of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS)

NASA Technical Reports Server (NTRS)

Chrien, Thomas G.; Green, Robert O.

1993-01-01

The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) measures the upwelling radiance in 224 spectral bands. These data are required as images of approximately 11 by up to 100 km in extent at nominally 20 by 20 meter spatial resolution. In this paper we describe the underlying spatial sampling and spatial response characteristics of AVIRIS.

Remote sensing characterization of the Animas River watershed, southwestern Colorado, by AVIRIS imaging spectroscopy

USGS Publications Warehouse

Dalton, J.B.; Bove, D.J.; Mladinich, C.S.

2005-01-01

Visible-wavelength and near-infrared image cubes of the Animas River watershed in southwestern Colorado have been acquired by the Jet Propulsion Laboratory's Airborne Visible and InfraRed Imaging Spectrometer (AVIRIS) instrument and processed using the U.S. Geological Survey Tetracorder v3.6a2 implementation. The Tetracorder expert system utilizes a spectral reference library containing more than 400 laboratory and field spectra of end-member minerals, mineral mixtures, vegetation, manmade materials, atmospheric gases, and additional substances to generate maps of mineralogy, vegetation, snow, and other material distributions. Major iron-bearing, clay, mica, carbonate, sulfate, and other minerals were identified, among which are several minerals associated with acid rock drainage, including pyrite, jarosite, alunite, and goethite. Distributions of minerals such as calcite and chlorite indicate a relationship between acid-neutralizing assemblages and stream geochemistry within the watershed. Images denoting material distributions throughout the watershed have been orthorectified against digital terrain models to produce georeferenced image files suitable for inclusion in Geographic Information System databases. Results of this study are of use to land managers, stakeholders, and researchers interested in understanding a number of characteristics of the Animas River watershed.

Synthesis of Multispectral Bands from Hyperspectral Data: Validation Based on Images Acquired by AVIRIS, Hyperion, ALI, and ETM+

NASA Technical Reports Server (NTRS)

Blonksi, Slawomir; Gasser, Gerald; Russell, Jeffrey; Ryan, Robert; Terrie, Greg; Zanoni, Vicki

2001-01-01

Multispectral data requirements for Earth science applications are not always studied rigorously studied before a new remote sensing system is designed. A study of the spatial resolution, spectral bandpasses, and radiometric sensitivity requirements of real-world applications would focus the design onto providing maximum benefits to the end-user community. To support systematic studies of multispectral data requirements, the Applications Research Toolbox (ART) has been developed at NASA's Stennis Space Center. The ART software allows users to create and assess simulated datasets while varying a wide range of system parameters. The simulations are based on data acquired by existing multispectral and hyperspectral instruments. The produced datasets can be further evaluated for specific end-user applications. Spectral synthesis of multispectral images from hyperspectral data is a key part of the ART software. In this process, hyperspectral image cubes are transformed into multispectral imagery without changes in spatial sampling and resolution. The transformation algorithm takes into account spectral responses of both the synthesized, broad, multispectral bands and the utilized, narrow, hyperspectral bands. To validate the spectral synthesis algorithm, simulated multispectral images are compared with images collected near-coincidentally by the Landsat 7 ETM+ and the EO-1 ALI instruments. Hyperspectral images acquired with the airborne AVIRIS instrument and with the Hyperion instrument onboard the EO-1 satellite were used as input data to the presented simulations.

Evaluation of Landscape Structure Using AVIRIS Quicklooks and Ancillary Data

NASA Technical Reports Server (NTRS)

Sanderson, Eric W.; Ustin, Susan L.

1998-01-01

Currently the best tool for examining landscape structure is remote sensing, because remotely sensed data provide complete and repeatable coverage over landscapes in many climatic regimes. Many sensors, with a variety of spatial scales and temporal repeat cycles, are available. The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) has imaged over 4000 scenes from over 100 different sites throughout North America. For each of these scenes, one-band "quicklook" images have been produced for review by AVIRIS investigators. These quicklooks are free, publicly available over the Internet, and provide the most complete set of landscape structure data yet produced. This paper describes the methodologies used to evaluate the landscape structure of quicklooks and generate corresponding datasets for climate, topography and land use. A brief discussion of preliminary results is included at the end. Since quicklooks correspond exactly to their parent AVIRIS scenes, the methods used to derive climate, topography and land use data should be applicable to any AVIRIS analysis.

Lossless compression of AVIRIS data: Comparison of methods and instrument constraints

NASA Technical Reports Server (NTRS)

Roger, R. E.; Arnold, J. F.; Cavenor, M. C.; Richards, J. A.

1992-01-01

A family of lossless compression methods, allowing exact image reconstruction, are evaluated for compressing Airborne Visible/Infrared Imaging Spectrometers (AVIRIS) image data. The methods are used on Differential Pulse Code Modulation (DPCM). The compressed data have an entropy of order 6 bits/pixel. A theoretical model indicates that significantly better lossless compression is unlikely to be achieved because of limits caused by the noise in the AVIRIS channels. AVIRIS data differ from data produced by other visible/near-infrared sensors, such as LANDSAT-TM or SPOT, in several ways. Firstly, the data are recorded at a greater resolution (12 bits, though packed into 16-bit words). Secondly, the spectral channels are relatively narrow and provide continuous coverage of the spectrum so that the data in adjacent channels are generally highly correlated. Thirdly, the noise characteristics of the AVIRIS are defined by the channels' Noise Equivalent Radiances (NER's), and these NER's show that, at some wavelengths, the least significant 5 or 6 bits of data are essentially noise.

Using AVIRIS Data to Map and Characterize Subaerially and Subaqueously Erupted BasalticVolcanic Tephras: The Challenge of Mapping Low-Albedo Materials

NASA Technical Reports Server (NTRS)

Farrand, William H.

2004-01-01

Increases in the signal-to-noise ratio (SNR) in AVIRIS has enabled the mapping and characterization of low albedo materials. Low albedo materials of interest include certain soils, man-made materials (asphalt, certain building materials, tires, etc.), and basaltic lava flows and ashes. Early in its history, the response of the AVIRIS sensor was not sensitive enough so that these low albedo materials could be reliably mapped. However, as indicated by Green and Pavri (2002) the noise equivalent delta radiance (NEdL) of AVIRIS in the 2001 flight season was below 0.010 in all but the shortest wavelength channels. This is approximately a ten-fold improvement from the 1989 flight season when NEdL was closer to 0.1 (Green et al., 1990). In the current investigation, AVIRIS data from the 2002 flight season collected over the Pavant Butte tuff cone, Tabernacle Hill tuff ring, and an associated lava flow in the Black Rock Desert of west central Utah were examined to determine how well these generally low albedo volcanic lavas and tephras could be discriminated from background materials. The Pavant Butte tuff cone was examined by the author in an earlier study with a 1989 AVIRIS dataset (Farrand and Singer,

AVIRIS performance during the 1987 flight season: An AVIRIS project assessment and summary of the NASA-sponsored performance evaluation

NASA Technical Reports Server (NTRS)

Vane, Gregg; Porter, Wallace M.; Reimer, John H.; Chrien, Thomas G.; Green, Robert O.

1988-01-01

Results are presented of the assessment of AVIRIS performance during the 1987 flight season by the AVIRIS project and the earth scientists who were chartered by NASA to conduct an independent data quality and sensor performance evaluation. The AVIRIS evaluation program began in late June 1987 with the sensor meeting most of its design requirements except for signal-to-noise ratio in the fourth spectrometer, which was about half of the required level. Several events related to parts failures and design flaws further reduced sensor performance over the flight season. Substantial agreement was found between the assessments by the project and the independent investigators of the effects of these various factors. A summary of the engineering work that is being done to raise AVIRIS performance to its required level is given. In spite of degrading data quality over the flight season, several exciting scientific results were obtained from the data. These include the mapping of the spatial variation of atmospheric precipitable water, detection of environmentally-induced shifts in the spectral red edge of stressed vegetation, detection of spectral features related to pigment, leaf water and ligno-cellulose absorptions in plants, and the identification of many diagnostic mineral absorption features in a variety of geological settings.

Exploring a Black Body Source as an Absolute Radiometric Calibration Standard and Comparison with a NIST Traced Lamp Standard

NASA Technical Reports Server (NTRS)

Green, Robert O.; Chrien, Thomas; Sarture, Chuck

2001-01-01

Radiometric calibration of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) is required for the scientific research and application objectives pursued with the spectroscopic measurements. Specifically calibration is required for: inter-comparison of AVIRIS data measured at different locations and at different times; analysis of AVIRIS data with data measured by other instruments; and analysis of AVIRIS data in conjunction with computer models. The primary effect of radiometric calibration is conversion of AVIRIS instrument response values (digitized numbers, or DN) to units of absolute radiance. For example, a figure shows the instrument response spectrum measured by AVIRIS over a portion of Rogers Dry Lake, California, and another figure shows the same spectrum calibrated to radiance. Only the calibrated spectrum may be quantitatively analyzed for science research and application objectives. Since the initial development of the AVIRIS instrument-radiometric calibration has been based upon a 1000-W irradiance lamp with a calibration traced to the National Institute of Standards and Technology (NIST). There are several advantages to this irradiance-lamp calibration approach. First, the considerable effort of NIST backs up the calibration. Second, by changing the distance to the lamp, the output can closely span the radiance levels measured by AVIRIS. Third, this type of standard is widely used. Fourth, these calibrated lamps are comparatively inexpensive. Conversely, there are several disadvantages to this approach as well. First, the lamp is not a primary standard. Second, the lamp output characteristics may change in an unknown manner through time. Third, it is difficult to assess, constrain, or improve the calibration uncertainty delivered with the lamp. In an attempt to explore the effect and potentially address some of these disadvantages a set of analyses and measurements comparing an irradiance lamp with a black-body source have been completed. This research is ongoing, and the current set of measurements, analyses, and results are presented in this paper.

Current instrument status of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS)

NASA Technical Reports Server (NTRS)

Eastwood, Michael L.; Sarture, Charles M.; Chrien, Thomas G.; Green, Robert O.; Porter, Wallace M.

1991-01-01

An upgraded version of AVIRIS, an airborne imaging spectrometer based on a whiskbroom-type scanner coupled via optical fibers to four dispersive spectrometers, that has been in operation since 1987 is described. Emphasis is placed on specific AVIRIS subsystems including foreoptics, fiber optics, and an in-flight reference source; spectrometers and detector dewars; a scan drive mechanism; a signal chain; digital electronics; a tape recorder; calibration systems; and ground support requirements.

Mineral Mapping Using AVIRIS Data at Ray Mine, AZ

NASA Technical Reports Server (NTRS)

McCubbin, Ian; Lang, Harold; Green, Robert O.; Roberts, Dar

1998-01-01

Imaging Spectroscopy enables the identification and mapping of surface mineralogy over large areas. This study focused on assessing the utility of Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data for environmental impact analysis over the Environmental Protection Agency's (EPA) high priority Superfund site Ray Mine, AZ. Using the Spectral Angle Mapper (SAM) algorithm to analyze AVIRIS data makes it possible to map surface materials that are indicative of acid generating minerals. The improved performance of the AVIRIS sensor since 1996 provides data with sufficient signal to noise ratio to characterize up to 8 image endmembers. Specifically we employed SAM to map minerals associated with mine generated acid waste, namely jarositc, goethite, and hematite, in the presence of a complex mineralogical background.

Estimation of crown closure from AVIRIS data using regression analysis

NASA Technical Reports Server (NTRS)

Staenz, K.; Williams, D. J.; Truchon, M.; Fritz, R.

1993-01-01

Crown closure is one of the input parameters used for forest growth and yield modelling. Preliminary work by Staenz et al. indicates that imaging spectrometer data acquired with sensors such as the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) have some potential for estimating crown closure on a stand level. The objectives of this paper are: (1) to establish a relationship between AVIRIS data and the crown closure derived from aerial photography of a forested test site within the Interior Douglas Fir biogeoclimatic zone in British Columbia, Canada; (2) to investigate the impact of atmospheric effects and the forest background on the correlation between AVIRIS data and crown closure estimates; and (3) to improve this relationship using multiple regression analysis.

Extraction of ozone and chlorophyll-A distribution from AVIRIS data

NASA Technical Reports Server (NTRS)

Schaepman, M.; Itten, K. I.; Schlaepfer, D.; Kurer, U.; Veraguth, S.; Keller, J.

1995-01-01

The potential of airborne imaging spectrometry for assessing and monitoring natural resources is studied. Therefore, an AVIRIS scene of the NASA's MacEurope 1991 campaign - acquired in Central Switzerland - is used. The test site consists of an urban area, the Lake Zug with its surrounding fields, the Rigi mountain in the center of the test site, and the Lake of Four Cantons. The region is covered by the AVIRIS flight #910705, run 6 and 7 of the NASA ER-2 aircraft resulting in an average nominal pixel size of about 18 m. Simultaneous to the ER-2 overflight spectroradiometric measurements have been taken in various locations. Preselected reference targets were measured in the field with a GER Mark V spectroradiometer, and radiance measurements were taken to the lake using a Li-Cor LI 1800UW specroradiometer below and above the water surface. A comprehensive meteorological data set was obtained by joining the POLLUMET experiment which carried out measurements to investigate the summer smog in Switzerland on the same day. The quality assessment for the actual data set can be found in detail in Meyer et al. A parametric approach calculating the location of the airplane was used to simulate the observation geometry. This parametric preprocessing procedure, which takes care of effects of flight line and attitude variations as well as the pixel-by-pixel topographic corrections is described in Meyer.

Quantifying Fractional Ground Cover on the Climate Sensitive High Plains Using AVIRIS and Landsat TM Data

NASA Technical Reports Server (NTRS)

Warner, Amanda Susan

2002-01-01

The High Plains is an economically important and climatologically sensitive region of the United States and Canada. The High Plains contain 100,000 sq km of Holocene sand dunes and sand sheets that are currently stabilized by natural vegetation. Droughts and the larger threat of global warming are climate phenomena that could cause depletion of natural vegetation and make this region susceptible to sand dune reactivation. This thesis is part of a larger study that is assessing the effect of climate variability on the natural vegetation that covers the High Plains using Landsat 5 and Landsat 7 data. The question this thesis addresses is how can fractional vegetation cover be mapped with the Landsat instruments using linear spectral mixture analysis and to what accuracy. The method discussed in this thesis made use of a high spatial and spectral resolution sensor called AVIRIS (Airborne Visible and Infrared Imaging Spectrometer) and field measurements to test vegetation mapping in three Landsat 7 sub-scenes. Near-simultaneous AVIRIS images near Ft. Morgan, Colorado and near Logan, New Mexico were acquired on July 10, 1999 and September 30, 1999, respectively. The AVIRIS flights preceded Landsat 7 overpasses by approximately one hour. These data provided the opportunity to test spectral mixture algorithms with AVIRIS and to use these data to constrain the multispectral mixed pixels of Landsat 7. The comparisons of mixture analysis between the two instruments showed that AVIRIS endmembers can be used to unmix Landsat 7 data with good estimates of soil cover, and reasonable estimates of non-photosynthetic vegetation and green vegetation. Landsat 7 derived image endmembers correlate with AVIRIS fractions, but the error is relatively large and does not give a precise estimate of cover.

Integration of AIRSAR and AVIRIS data for Trail Canyon alluvial fan, Death Valley, California

NASA Technical Reports Server (NTRS)

Kierein-Young, Kathryn S.

1995-01-01

Combining quantitative geophysical information extracted from the optical and microwave wavelengths provides complementary information about both the surface mineralogy and morphology. This study combines inversion results from two remote sensing instruments, a polarimetric synthetic aperture radar, AIRSAR, and an imaging spectrometer, AVIRIS, for Trail Canyon alluvial fan in Death Valley, California. The NASA/JPL Airborne Synthetic Aperture Radar (AIRSAR) is a quad-polarization, three frequency instrument. AIRSAR collects data at C-band = 5.66 cm, L-band = 23.98 cm, and P-band = 68.13 cm. The data are processed to four-looks and have a spatial resolution of 10 m and a swath width of 12 km. The AIRSAR data used in this study were collected as part of the Geologic Remote Sensing Field Experiment (GRSFE) over Death Valley on 9/14/89. The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) is a NASA/JPL instrument that flies in an ER-2 aircraft at an altitude of 20 km. AVIRIS uses four spectrometers to collect data in 224 spectral channels from 0.4 micrometer to 2.45 micrometer. The width of each spectral band is approximately 10 nm. AVIRIS collects data with a swath width of 11 km and a pixel size of 20 m. The AVIRIS data used in this study were collected over Death Valley on 5/31/92.

NASA's AVIRIS Instrument Sheds New Light on Southern California Wildfires

NASA Image and Video Library

2017-12-08

NASA's Airborne Visible Infrared Imaging Spectrometer instrument (AVIRIS), flying aboard a NASA Armstrong Flight Research Center high-altitude ER-2 aircraft, flew over the wildfires burning in Southern California on Dec. 5, 2017 and acquired this false-color image. Active fires are visible in red, ground surfaces are in green and smoke is in blue. AVIRIS is an imaging spectrometer that observes light in visible and infrared wavelengths, measuring the full spectrum of radiated energy. Unlike regular cameras with three colors, AVIRIS has 224 spectral channels from the visible through the shortwave infrared. This permits mapping of fire temperatures, fractional coverage, and surface properties, including how much fuel is available for a fire. Spectroscopy is also valuable for characterizing forest drought conditions and health to assess fire risk. AVIRIS has been observing fire-prone areas in Southern California for many years, forming a growing time series of before/after data cubes. These data are helping improve scientific understanding of fire risk and how ecosystems respond to drought and fire. https://photojournal.jpl.nasa.gov/catalog/PIA11243

Determination of in-flight AVIRIS spectral, radiometric, spatial and signal-to-noise characteristics using atmospheric and surface measurements from the vicinity of the rare-earth-bearing carbonatite at Mountain Pass, California

NASA Technical Reports Server (NTRS)

Green, Robert O.; Vane, Gregg; Conel, James E.

1988-01-01

An assessment of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) performance was made for a flight over Mountain Pass, California, July 30, 1987. The flight data were reduced to reflectance using an empirical algorithm which compensates for solar, atmospheric and instrument factors. AVIRIS data in conjunction with surface and atmospheric measurements acquired concurrently were used to develop an improved spectral calibration. An accurate in-flight radiometric calibration was also performed using the LOWTRAN 7 radiative transfer code together with measured surface reflectance and atmospheric optical depths. A direct comparison with coincident Thematic Mapper imagery of Mountain Pass was used to demonstrate the high spatial resolution and good geometric performance of AVIRIS. The in-flight instrument noise was independently determined with two methods which showed good agreement. A signal-to-noise ratio was calculated using data from a uniform playa. This ratio was scaled to the AVIRIS reference radiance model, which provided a basis for comparison with laboratory and other in-flight signal-to-noise determinations.

Mineral Potential in India Using Airborne Visible/Infrared Imaging Spectrometer-Next Generation (AVIRIS-NG) Data

NASA Astrophysics Data System (ADS)

Oommen, T.; Chatterjee, S.

2017-12-01

NASA and the Indian Space Research Organization (ISRO) are generating Earth surface features data using Airborne Visible/Infrared Imaging Spectrometer-Next Generation (AVIRIS-NG) within 380 to 2500 nm spectral range. This research focuses on the utilization of such data to better understand the mineral potential in India and to demonstrate the application of spectral data in rock type discrimination and mapping for mineral exploration by using automated mapping techniques. The primary focus area of this research is the Hutti-Maski greenstone belt, located in Karnataka, India. The AVIRIS-NG data was integrated with field analyzed data (laboratory scaled compositional analysis, mineralogy, and spectral library) to characterize minerals and rock types. An expert system was developed to produce mineral maps from AVIRIS-NG data automatically. The ground truth data from the study areas was obtained from the existing literature and collaborators from India. The Bayesian spectral unmixing algorithm was used in AVIRIS-NG data for endmember selection. The classification maps of the minerals and rock types were developed using support vector machine algorithm. The ground truth data was used to verify the mineral maps.

Use of the Airborne Visible/Infrared Imaging Spectrometer to calibrate the optical sensor on board the Japanese Earth Resources Satellite-1

NASA Technical Reports Server (NTRS)

Green, Robert O.; Conel, James E.; Vandenbosch, Jeannette; Shimada, Masanobu

1993-01-01

We describe an experiment to calibrate the optical sensor (OPS) on board the Japanese Earth Resources Satellite-1 with data acquired by the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS). On 27 Aug. 1992 both the OPS and AVIRIS acquired data concurrently over a calibration target on the surface of Rogers Dry Lake, California. The high spectral resolution measurements of AVIRIS have been convolved to the spectral response curves of the OPS. These data in conjunction with the corresponding OPS digitized numbers have been used to generate the radiometric calibration coefficients for the eight OPS bands. This experiment establishes the suitability of AVIRIS for the calibration of spaceborne sensors in the 400 to 2500 nm spectral region.

Measurement of atmospheric water vapor, leaf liquid water and reflectance with AVIRIS in the Boreal Ecosystem-Atmosphere Study: Initial results

NASA Technical Reports Server (NTRS)

Green, Robert O.; Conel, James E.; Roberts, Dar A.

1995-01-01

The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) acquired data as part of the Boreal Ecosystem-Atmosphere Study (BOREAS) in 1994. Flights occurred over the northern study area (NSA) in the region of 56 degrees north latitude and 98.5 degrees west longitude and over the southern study area (SSA) at 54 degrees north latitude and 105 degrees west longitude. These data will be used to directly derive spectral properties of the surface and atmosphere and to provide supporting data for other instruments, models, and experiments in support of the BOREAS objectives. We present a preliminary evaluation of the AVIRIS data collected in BOREAS in terms of the AVIRIS-derived parameters: water vapor, leaf water, and apparent spectral reflectance.

Comparison of laboratory calibrations of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) at the beginning and end of the first flight season

NASA Technical Reports Server (NTRS)

Vane, Gregg; Chrien, Thomas G.; Reimer, John H.; Green, Robert O.; Conel, James E.

1988-01-01

Spectral and radiometric calibrations of AVIRIS are described together with changes in instrument characteristics that occurred during the flight season. These changes include detachment of the optical fibers to two of the four AVIRIS spectrometers, degradation in the optical alignment of the spectrometers due to thermally induced and mechanical warpage, and breakage of a thermal blocking filter in one of the spectrometers. Means of improving the instrument are discussed.

Summaries of the Seventh JPL Airborne Earth Science Workshop January 12-16, 1998. Volume 1; AVIRIS Workshop

NASA Technical Reports Server (NTRS)

Green, Robert O. (Editor)

1998-01-01

This publication contains the summaries for the Seventh JPL Airborne Earth Science Workshop, held in Pasadena, California, on January 12-16, 1998. The main workshop is divided into three smaller workshops, and each workshop has a volume as follows: (1) Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) Workshop; (2) Airborne Synthetic Aperture Radar (AIRSAR) Workshop; and (3) Thermal Infrared Multispectral Scanner (TIMS) Workshop. This Volume 1 publication contains 58 papers taken from the AVIRIS workshop.

AVIRIS ground data-processing system

NASA Technical Reports Server (NTRS)

Reimer, John H.; Heyada, Jan R.; Carpenter, Steve C.; Deich, William T. S.; Lee, Meemong

1987-01-01

The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) has been under development at JPL for the past four years. During this time, a dedicated ground data-processing system has been designed and implemented to store and process the large amounts of data expected. This paper reviews the objectives of this ground data-processing system and describes the hardware. An outline of the data flow through the system is given, and the software and incorporated algorithms developed specifically for the systematic processing of AVIRIS data are described.

AVIRIS Spectrometer Maps Total Water Vapor Column

NASA Technical Reports Server (NTRS)

Conel, James E.; Green, Robert O.; Carrere, Veronique; Margolis, Jack S.; Alley, Ronald E.; Vane, Gregg A.; Bruegge, Carol J.; Gary, Bruce L.

1992-01-01

Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) processes maps of vertical-column abundances of water vapor in atmosphere with good precision and spatial resolution. Maps provide information for meteorology, climatology, and agriculture.

Evaluating the Synergistic Use of Low-Altitude AVIRIS and AIRSAR Data for Land Cover Mapping in Northeast Yellowstone National Park

NASA Technical Reports Server (NTRS)

Berglund, Judith; Spruce, Joseph

2001-01-01

Current land cover maps are needed by Yellowstone National Park (YNP) managers to assist them in protecting and preserving native flora and fauna. Synergistic use of hyperspectral and radar imagery offers great promise for mapping habitat in terms of cover type composition and structure. In response, a study was conducted to assess the utility of combining low-altitude AVIRIS and AIRSAR data for mapping land cover in a portion of northeast YNP. Land cover maps were produced from individual AVIRIS and AIRSAR data sets, as well as from a hybrid data stack of selected AVIRIS and AIRSAR data bands. The three resulting classifications were compared to field survey data and aerial photography to assess apparent benefits of hyperspectral/SAR data fusion for land cover mapping. Preliminary results will be presented.

Ground-truthing AVIRIS mineral mapping at Cuprite, Nevada

NASA Technical Reports Server (NTRS)

Swayze, Gregg; Clark, Roger N.; Kruse, Fred; Sutley, Steve; Gallagher, Andrea

1992-01-01

Mineral abundance maps of 18 minerals were made of the Cuprite Mining District using 1990 AVIRIS data and the Multiple Spectral Feature Mapping Algorithm (MSFMA) as discussed in Clark et al. This technique uses least-squares fitting between a scaled laboratory reference spectrum and ground calibrated AVIRIS data for each pixel. Multiple spectral features can be fitted for each mineral and an unlimited number of minerals can be mapped simultaneously. Quality of fit and depth from continuum numbers for each mineral are calculated for each pixel and the results displayed as a multicolor image.

Preliminary study of Kelso Dunes using AVIRIS, TM, and AIRSAR

NASA Technical Reports Server (NTRS)

Xu, Pung; Blumberg, Dan G.; Greeley, Ronald

1995-01-01

Remote sensing of sand dunes helps in the understanding of aeolian process and provides important information about the regional geologic history, environmental change, and desertification. Remotely sensed data combined with field studies are valuable in studying dune morphology, regional aeolian dynamics, and aeolian depositional history. In particular, active and inactive sands of the Kelso Dunes have been studied using landsat TM and AIRSAR. In this report, we describe the use of AVIRIS data to study the Kelso dunes and to compare the AVIRIS information with that from TM and AIRSAR.

Quantifying BRDF Effects in Comparing Landsat-7 and AVIRIS Near-Simultaneous Acquisitions for Studies of High Plains Vegetation Cover

NASA Technical Reports Server (NTRS)

Goetz, A. F. H.; Heidebrecht, K. B.; Gutmann, E. D.; Warner, A. S.; Johnson, E. L.; Lestak, L. R.

1999-01-01

Approximately 100,000 sq. km of the High Plains of the central United States are covered by sand dunes and sand sheets deposited during the Holocene. Soil-dating evidence shows that there were at least four periods of dune reactivation during major droughts in the last 10,000 years. The dunes in this region are anchored by vegetation. We have undertaken a study of land-use change in the High Plains from 1985 to the present using Landsat 5 TM and Landsat 7 ETM+ images to map variation in vegetation cover during wet and dry years. Mapping vegetation cover of less than 20% is important in modeling potential surface reactivation since at this level the vegetation no longer sufficiently shields sandy surfaces from movement by wind. Landsat TM data have both the spatial resolution and temporal coverage to facilitate vegetation cover analysis for model development and verification. However, there is still the question of how accurate TM data are for the measurement of both growing and senescent vegetation in and and semi-arid regions. AVIRIS provides both high spectral resolution as well as high signal-to-noise ratio and can be used to test the accuracy of Landsat TM and ETM+ data. We have analyzed data from AVIRIS flown nearly concurrently with a Landsat 7 overpass. The comparison between an AVIRIS image swath of 11 km width subtending a 30 deg. angle and the same area covered by a 0.8 deg. angle from Landsat required accounting for the BRDF. A normalization technique using the ratio of the reflectances from registered AVIRIS and Landsat data proved superior to the techniques of column averaging on AVIRIS data alone published previously by Kennedy et al. This technique can be applied to aircraft data covering a wider swath angle than AVIRIS to develop BRDF responses for a wide variety of surfaces more efficiently than from ground measurements.

Remotely estimating photosynthetic capacity, and its response to temperature, in vegetation canopies using imaging spectroscopy

DOE PAGES

Serbin, Shawn P.; Singh, Aditya; Desai, Ankur R.; ...

2015-06-11

To date, the utility of ecosystem and Earth system models (EESMs) has been limited by poor spatial and temporal representation of critical input parameters. For example, EESMs often rely on leaf-scale or literature-derived estimates for a key determinant of canopy photosynthesis, the maximum velocity of RuBP carboxylation (Vcmax, μmol m –2 s –1). Our recent work (Ainsworth et al., 2014; Serbin et al., 2012) showed that reflectance spectroscopy could be used to estimate Vcmax at the leaf level. Here, we present evidence that imaging spectroscopy data can be used to simultaneously predict Vcmax and its sensitivity to temperature (E V)more » at the canopy scale. In 2013 and 2014, high-altitude Airborne Visible/Infrared Imaging Spectroscopy (AVIRIS) imagery and contemporaneous ground-based assessments of canopy structure and leaf photosynthesis were acquired across an array of monospecific agroecosystems in central and southern California, USA. A partial least-squares regression (PLSR) modeling approach was employed to characterize the pixel-level variation in canopy V cmax (at a standardized canopy temperature of 30 °C) and E V, based on visible and shortwave infrared AVIRIS spectra (414–2447 nm). Our approach yielded parsimonious models with strong predictive capability for Vcmax (at 30 °C) and E V (R 2 of withheld data = 0.94 and 0.92, respectively), both of which varied substantially in the field (≥ 1.7 fold) across the sampled crop types. The models were applied to additional AVIRIS imagery to generate maps of V cmax and E V, as well as their uncertainties, for agricultural landscapes in California. The spatial patterns exhibited in the maps were consistent with our in-situ observations. As a result, these findings highlight the considerable promise of airborne and, by implication, space-borne imaging spectroscopy, such as the proposed HyspIRI mission, to map spatial and temporal variation in key drivers of photosynthetic metabolism in terrestrial vegetation.« less

Scaling, propagating and mapping uncertainty in spectroscopy-derived foliar traits from the leaf to the image

NASA Astrophysics Data System (ADS)

Singh, A.; Serbin, S. P.; Kingdon, C.; Townsend, P. A.

2013-12-01

A major goal of remote sensing, and imaging spectroscopy in particular, is the development of generalizable algorithms to repeatedly and accurately map ecosystem properties such as canopy chemistry across space and time. Existing methods must therefore be tested across a range of measurement approaches to identify and overcome limits to the consistent retrieval of such properties from spectroscopic imagery. Here we illustrate a general approach for the estimation of key foliar biochemical and morphological traits from spectroscopic imagery derived from the AVIRIS instrument and the propagation of errors from the leaf to the image scale using partial least squares regression (PLSR) techniques. Our method involves the integration of three types of data representing different scales of observation: At the image scale, the images were normalized for atmospheric, illumination and BRDF effects. Spectra from field plot locations were extracted from the 51AVIRIS images and were averaged when the field plot was larger than a single pixel. At the plot level, the scaling was conducted using multiple replicates (1000) derived from the leaf-level uncertainty estimates to generate plot-level estimates with their associated uncertainties. Leaf-level estimates of foliar traits (%N, %C, %Fiber, %Cellulose, %Lignin, LMA) were scaled to the canopy based on relative species composition of each plot. Image spectra were iteratively split into 50/50 randomized calibration-validation datasets and multiple (500) trait-predictive PLSR models were generated, this time sampling from within the plot-level uncertainty distribution. This allowed the propagation of uncertainty from the leaf-level dependent variables to the plot level, and finally to models built using AVIRIS image spectra. Moreover, this method allows us to generate spatially explicit maps of uncertainty in our sampled traits. Both LMA and %N PLSR models had a R2 greater than 0.8, root mean square errors (RMSEs) for both variables were less than 6% of the range of data. Fiber and lignin were predicted with R2 > 0.65 and carbon and cellulose greater than 0.5. Although R2 of these variables were lower than LMA and %N, their RMSE values were beneath 9% of the range of data. The comparatively lower R2 values for %C and cellulose in particular were related to the low amount of natural variability in these constituents. Further, coefficients from the randomized set of PLSR models were applied to imagery and aggregated to obtain pixel-wise predicted means and uncertainty estimates for each foliar trait. The resulting maps of nutritional and morphological properties together with their overall uncertainties represent a first-of-its-kind data product for examining the spatio-temporal patterns of forest functioning and nutrient cycling. These data are now being used to relate foliar traits with ecosystem processes such as streamwater nutrient export and insect herbivory. In addition, the ability to assign a retrieval uncertainty enables more efficient assimilation of these data products into ecosystem models to help constrain carbon and nutrient cycling projections.

Proceedings of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) Performance Evaluation Workshop

NASA Technical Reports Server (NTRS)

Vane, Gregg (Editor)

1988-01-01

The focus of the workshop was the assessment of data quality by the AVIRIS project. Summaries of 16 of the presentations are published. The AVIRIS performance evaluation period began in June 87 with flight data collection in the eastern U.S., and continued in the west until Oct. 87, after which the instrument was returned for post flight calibration. At the beginning, the sensor met all of the spatial, spectral and radiometric performance requirements except in spectrometer D, where the signal to noise ratio was below the required value. By the end, sensor performance had deteriorated due to failure of 2 critical parts and to some design deficiences. The independent assessment by the NASA investigators confirmed the assessment by the AVIRIS project. Some scientific results were derived and are presented. These include the mapping of the spatial variation of atmospheric precipitable water, detection of shift in chlorophyll red, and mineral identification.

Band-Moment Compression of AVIRIS Hyperspectral Data and its Use in the Detection of Vegetation Stress

NASA Technical Reports Server (NTRS)

Estep, L.; Davis, B.

2001-01-01

A remote sensing campaign was conducted over a U.S. Department of Agriculture test farm at Shelton, Nebraska. An experimental field was set off in plots that were differentially treated with anhydrous ammonia. Four replicates of 0-kg/ha to 200-kg/ha plots, in 50-kg/ha increments, were set out in a random block design. Low-altitude (GSD of 3 m) Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) hyperspectral data were collected over the site in 224 bands. Simultaneously, ground data were collected to support the airborne imagery. In an effort to reduce data load while maintaining or enhancing algorithm performance for vegetation stress detection, band-moment compression and analysis was applied to the AVIRIS image cube. The results indicated that band-moment techniques compress the AVIRIS dataset significantly while retaining the capability of detecting environmentally induced vegetation stress.

Temporal changes in endmember abundances, liquid water and water vapor over vegetation at Jasper Ridge

NASA Technical Reports Server (NTRS)

Roberts, Dar A.; Green, Robert O.; Sabol, Donald E.; Adams, John B.

1993-01-01

Imaging spectrometry offers a new way of deriving ecological information about vegetation communities from remote sensing. Applications include derivation of canopy chemistry, measurement of column atmospheric water vapor and liquid water, improved detectability of materials, more accurate estimation of green vegetation cover and discrimination of spectrally distinct green leaf, non-photosynthetic vegetation (NPV: litter, wood, bark, etc.) and shade spectra associated with different vegetation communities. Much of our emphasis has been on interpreting Airborne Visible/Infrared Imaging Spectrometry (AVIRIS) data spectral mixtures. Two approaches have been used, simple models, where the data are treated as a mixture of 3 to 4 laboratory/field measured spectra, known as reference endmembers (EM's), applied uniformly to the whole image, to more complex models where both the number of EM's and the types of EM's vary on a per-pixel basis. Where simple models are applied, materials, such as NPV, which are spectrally similar to soils, can be discriminated on the basis of residual spectra. One key aspect is that the data are calibrated to reflectance and modeled as mixtures of reference EM's, permitting temporal comparison of EM fractions, independent of scene location or data type. In previous studies the calibration was performed using a modified-empirical line calibration, assuming a uniform atmosphere across the scene. In this study, a Modtran-based calibration approach was used to map liquid water and atmospheric water vapor and retrieve surface reflectance from three AVIRIS scenes acquired in 1992 over the Jasper Ridge Biological Preserve. The data were acquired on June 2nd, September 4th and October 6th. Reflectance images were analyzed as spectral mixtures of reference EM's using a simple 4 EM model. Atmospheric water vapor derived from Modtran was compared to elevation, and community type. Liquid water was compare to the abundance of NPV, Shade and Green Vegetation (VG) for select sites to determine whether a relationship existed, and under what conditions the relationship broke down. Temporal trends in endmember fractions, liquid water and atmospheric water vapor were investigated also. The combination of spectral mixture analysis and the Modtran based atmospheric/liquid water models was used to develop a unique vegetation community description.

Characterization of post-fire surface cover, soils, and burn severity at the Cerro Grande Fire, New Mexico, using hyperspectral and multispectral remote sensing

USGS Publications Warehouse

Kokaly, R.F.; Rockwell, B.W.; Haire, S.L.; King, T.V.V.

2007-01-01

Forest fires leave behind a changed ecosystem with a patchwork of surface cover that includes ash, charred organic matter, soils and soil minerals, and dead, damaged, and living vegetation. The distributions of these materials affect post-fire processes of erosion, nutrient cycling, and vegetation regrowth. We analyzed high spatial resolution (2.4??m pixel size) Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) data collected over the Cerro Grande fire, to map post-fire surface cover into 10 classes, including ash, soil minerals, scorched conifer trees, and green vegetation. The Cerro Grande fire occurred near Los Alamos, New Mexico, in May 2000. The AVIRIS data were collected September 3, 2000. The surface cover map revealed complex patterns of ash, iron oxide minerals, and clay minerals in areas of complete combustion. Scorched conifer trees, which retained dry needles heated by the fire but not fully combusted by the flames, were found to cover much of the post-fire landscape. These scorched trees were found in narrow zones at the edges of completely burned areas. A surface cover map was also made using Landsat Enhanced Thematic Mapper plus (ETM+) data, collected September 5, 2000, and a maximum likelihood, supervised classification. When compared to AVIRIS, the Landsat classification grossly overestimated cover by dry conifer and ash classes and severely underestimated soil and green vegetation cover. In a comparison of AVIRIS surface cover to the Burned Area Emergency Rehabilitation (BAER) map of burn severity, the BAER high burn severity areas did not capture the variable patterns of post-fire surface cover by ash, soil, and scorched conifer trees seen in the AVIRIS map. The BAER map, derived from air photos, also did not capture the distribution of scorched trees that were observed in the AVIRIS map. Similarly, the moderate severity class of Landsat-derived burn severity maps generated from the differenced Normalized Burn Ratio (dNBR) calculation had low agreement with the AVIRIS classes of scorched conifer trees. Burn severity and surface cover images were found to contain complementary information, with the dNBR map presenting an image of degree of change caused by fire and the AVIRIS-derived map showing specific surface cover resulting from fire.

NASA AVIRIS Aids in Gulf Oil Spill Response

NASA Image and Video Library

2010-05-27

This image from NASA Airborne Visible/Infrared Imaging Spectrometer instrument AVIRIS was collected on May 17, 2010, over the site of the Deepwater Horizon BP oil spill disaster. In the image, crude oil on the surface appears orange to brown.

AVIRIS user's guide

NASA Technical Reports Server (NTRS)

Johnson, Howell K.; Green, Robert O.

1995-01-01

This paper serves as a brief overview of the AVIRIS instrument (Airborne Visible/Infrared Imaging Spectrometer). The AVIRIS sensor collects data that will be used for quantitative characterization of the Earth's surface and atmosphere from geometrically coherent spectroradiometric measurements. This data can be applied to studies in the fields of oceanography, environmental science, snow hydrology, geology, volcanology, soil and land management, atmospheric and aerosol studies, agriculture, and limnology. Applications under development include the assessment and monitoring of environmental hazards such as toxic waste, oil spills, and land/air/water pollution. Mission planning and flight operations are discussed, and recommendations are given regarding the deployment of ground truth experiments.

Low Altitude AVIRIS Data for Mapping Landform Types on West Ship Island, Mississippi

NASA Technical Reports Server (NTRS)

Spruce, Joseph; Otvos, Ervin; Giardino, Marco

2002-01-01

A chain of barrier islands provides protection against hurricanes and severe storms along the south and southeastern shores of the United States. Barrier island landform types can be spectrally similar and as small as a few meters across, making highly detailed maps difficult to produce. To determine whether high-resolution airborne hyperspectral imagery could provide detailed maps of barrier island landform types, we used low-altitude hyperspectral and multispectral imagery to map surface environments of West Ship Island, Mississippi. We employed 3.4-meter AVIRIS hyperspectral imagery acquired in July 1999 and 0.5-meter ADAR multispectral data acquired in November 1997. The data were co-registered to digital ortho aerial imagery, and the AVIRIS data was scaled to ground reflectance using ATREM software. Unsupervised classification of AVIRIS and ADAR data proceeded using ISODATA clustering techniques. The resulting landform maps were field-checked and compared to aerial photography and digital elevation maps. Preliminary analyses indicated that the AVIRIS classification mapped more landform types, while the ADAR-based map enabled smaller patches to be identified. Used together, these maps provided a means to assess landform distributions of West Ship Island before and after Hurricane Gorges. Classification accuracy is being addressed through photo-interpretation and field surveys of sample areas selected with stratified random sampling.

Low Altitude AVIRIS Data for Mapping Landform Types on West Ship Island, Mississippi

NASA Technical Reports Server (NTRS)

Spruce, Joseph; Otvos, Ervin; Giardino, Marco

2003-01-01

A chain of barrier islands provides protection against hurricanes and severe storms along the southern and southeastern shores of the Unites States. Barrier island landform types can be spectrally similar and as small as a few meters across, making highly detailed maps difficult to produce. To determine whether high-resolution airborne hyperspectral imagery could provide detailed maps of barrier island landform types, we used low-altitude hyperspectral and multispectral imagery to map surface environments of West Ship Island, Mississippi. We employed 3.4 meter AVIRIS hyperspectral imagery acquired in July 1999 and 0.5 meter ADAR multispectral data acquired in November 1997. The data were co-registered to digital ortho aerial imagery, and the AVIRIS data was scaled to ground reflectance using ATREM software. Unsupervised classification of AVIRIS and ADAR data proceeded using ISODATA clustering techniques. The resulting landform maps were field-checked and compared to aerial photography and digital elevation maps. Preliminary analyses indicated that the AVIRIS classification mapped more landform types, while the ADAR-based map enabled smaller patches to be identified. Used together, these maps provided a means to assess landform distributions of West Ship Island before and after Hurricane Georges. Classification accuracy is being assessed through photo-interpretation and field surveys of sample areas selected with stratified random sampling.

AVIRIS Reflectance Retrievals: UCSB Users Manual. Appendix 1

NASA Technical Reports Server (NTRS)

Roberts, Dar A.; Prentiss, Dylan

2001-01-01

The following write-up is designed to help students and researchers take Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) radiance data and retrieve surface reflectance. In the event that the software is not available, but a user has access to a reflectance product, this document is designed to provide a better understanding of how AVIRIS reflectance was retrieved. This guide assumes that the reader has both a basic understanding of the UNIX computing environment, and that of spectroscopy. Knowledge of the Interactive Data Language (IDL) and the Environment for Visualizing Images (ENVI) is helpful. This is a working document, and many of the fine details described in the following pages have been previously undocumented. After having read this document the reader should be able to process AVIRIS to reflectance, provided access to all of the code is possible. The AVIRIS radiance data itself is pre-processed at the Jet Propulsion Laboratory (JPL) in Pasadena, California. The first section of this paper describes how to read data from tape and byte-swap the data. Section 2 describes the procedure in preparing support files before running the 'h2o' suite of programs. Section 3 describes the four programs used in the process, h2olut9.f, h2ospl9.f, vlsfit9.f and rfl9.f.

Algal Accessory Pigment Detection Using AVIRIS Image-Derived Spectral Radiance Data

NASA Technical Reports Server (NTRS)

Richardson, Laurie L.; Ambrosia, Vincent G.

1996-01-01

Visual and derivative analyses of AVIRIS spectral data can be used to detect algal accessory pigments in aquatic communities. This capability extends the use of remote sensing for the study of aquatic ecosystems by allowing detection of taxonomically significant pigment signatures which yield information about the type of algae present. Such information allows remote sensing-based assessment of aquatic ecosystem health, as in the detection of nuisance blooms of cyanobacteria or toxic blooms of dinoflagellates. Remote sensing of aquatic systems has traditionally focused on quantification of chlorophyll a, a photoreactive (and light-harvesting) pigment which is common to all algae as well as cyanobacteria (bluegreen algae). Due to the ubiquitousness of this pigment within algae, chl a is routinely measured to estimate algal biomass both during ground-truthing and using various airborne or satellite based sensors, including AVIRIS. Within the remote sensing and aquatic sciences communities, ongoing research has been performed to detect algal accessory pigments for assessment of algal population composition. This research is based on the fact that many algal accessory pigments are taxonomically significant, and all are spectrally unique. Aquatic scientists have been refining pigment analysis techniques, primarily high performance liquid chromatography, or HPLC, to detect specific pigments as a time-saving alternative to individual algal cell identifications and counts. Remote sensing scientists are investigating the use of pigment signatures to construct pigment libraries analogous to mineral spectral libraries used in geological remote sensing applications. The accessory pigment approach has been used successfully in remote sensing using data from the Thematic Mapper, low-altitude, multiple channel scanners, field spectroradiometers and the AVIRIS hyperspectral scanner. Due to spectral and spatial resolution capabilities, AVIRIS is the sensor of choice for such studies. We present here our results on detection of algal accessory pigments using AVIRIS data.

Application of imaging spectrometer data to the Kings-Kaweah ophiolite melange

NASA Technical Reports Server (NTRS)

Mustard, John F.; Pieters, Carle M.

1988-01-01

The Kings-Kaweah ophiolite melange in east-central California is thought to be an obducted oceanic fracture zone and provides the rare opportunity to examine in detail the complex nature of this type of terrain. It is anticipated that the distribution and abundance of components in the melange can be used to determine the relative importance of geologic processes responsible for the formation of fracture zone crust. Laboratory reflectance spectra of field samples indicate that the melange components have distinct, diagnostic absorptions at visible to near-infrared wavelengths. The spatial and spectral resolution of AVIRIS is ideally suited for addressing important scientific questions concerning the Kings-Kaweah ophiolite melange and fracture zones in general.

Coupling of Large Eddy Simulations with Meteorological Models to simulate Methane Leaks from Natural Gas Storage Facilities

NASA Astrophysics Data System (ADS)

Prasad, K.

2017-12-01

Atmospheric transport is usually performed with weather models, e.g., the Weather Research and Forecasting (WRF) model that employs a parameterized turbulence model and does not resolve the fine scale dynamics generated by the flow around buildings and features comprising a large city. The NIST Fire Dynamics Simulator (FDS) is a computational fluid dynamics model that utilizes large eddy simulation methods to model flow around buildings at length scales much smaller than is practical with models like WRF. FDS has the potential to evaluate the impact of complex topography on near-field dispersion and mixing that is difficult to simulate with a mesoscale atmospheric model. A methodology has been developed to couple the FDS model with WRF mesoscale transport models. The coupling is based on nudging the FDS flow field towards that computed by WRF, and is currently limited to one way coupling performed in an off-line mode. This approach allows the FDS model to operate as a sub-grid scale model with in a WRF simulation. To test and validate the coupled FDS - WRF model, the methane leak from the Aliso Canyon underground storage facility was simulated. Large eddy simulations were performed over the complex topography of various natural gas storage facilities including Aliso Canyon, Honor Rancho and MacDonald Island at 10 m horizontal and vertical resolution. The goal of these simulations included improving and validating transport models as well as testing leak hypotheses. Forward simulation results were compared with aircraft and tower based in-situ measurements as well as methane plumes observed using the NASA Airborne Visible InfraRed Imaging Spectrometer (AVIRIS) and the next generation instrument AVIRIS-NG. Comparison of simulation results with measurement data demonstrate the capability of the coupled FDS-WRF models to accurately simulate the transport and dispersion of methane plumes over urban domains. Simulated integrated methane enhancements will be presented and compared with results obtained from spectrometer data to estimate the temporally evolving methane flux during the Aliso Canyon blowout.

Measurement of the spectral absorption of liquid water in melting snow with an imaging spectrometer

NASA Technical Reports Server (NTRS)

Green, Robert O.; Dozier, Jeff

1995-01-01

Melting of the snowpack is a critical parameter that drives aspects of the hydrology in regions of the earth where snow accumulates seasonally. New techniques for measurement of snow melt over regional scales offer the potential to improve monitoring and modeling of snow-driven hydrological processes. We present the results of measuring the spectral absorption of liquid water in a melting snowpack with the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS). AVIRIS data were acquired over Mammoth Mountain, in east central California on 21 May 1994 at 18:35 UTC. The air temperature at 2926 m on Mammoth Mountain at site A was measured at 15-minute intervals during the day preceding the AVIRIS data acquisition. At this elevation, the air temperature did not drop below freezing the night of May 20 and had risen to 6 degrees Celsius by the time of the overflight on May 21. These temperature conditions support the presence of melting snow at the surface as the AVIRIS data were acquired.

Feature-based and statistical methods for analyzing the Deepwater Horizon oil spill with AVIRIS imagery

USGS Publications Warehouse

Rand, R.S.; Clark, R.N.; Livo, K.E.

2011-01-01

The Deepwater Horizon oil spill covered a very large geographical area in the Gulf of Mexico creating potentially serious environmental impacts on both marine life and the coastal shorelines. Knowing the oil's areal extent and thickness as well as denoting different categories of the oil's physical state is important for assessing these impacts. High spectral resolution data in hyperspectral imagery (HSI) sensors such as Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) provide a valuable source of information that can be used for analysis by semi-automatic methods for tracking an oil spill's areal extent, oil thickness, and oil categories. However, the spectral behavior of oil in water is inherently a highly non-linear and variable phenomenon that changes depending on oil thickness and oil/water ratios. For certain oil thicknesses there are well-defined absorption features, whereas for very thin films sometimes there are almost no observable features. Feature-based imaging spectroscopy methods are particularly effective at classifying materials that exhibit specific well-defined spectral absorption features. Statistical methods are effective at classifying materials with spectra that exhibit a considerable amount of variability and that do not necessarily exhibit well-defined spectral absorption features. This study investigates feature-based and statistical methods for analyzing oil spills using hyperspectral imagery. The appropriate use of each approach is investigated and a combined feature-based and statistical method is proposed.

Spatial/Spectral Identification of Endmembers from AVIRIS Data using Mathematical Morphology

NASA Technical Reports Server (NTRS)

Plaza, Antonio; Martinez, Pablo; Gualtieri, J. Anthony; Perez, Rosa M.

2001-01-01

During the last several years, a number of airborne and satellite hyperspectral sensors have been developed or improved for remote sensing applications. Imaging spectrometry allows the detection of materials, objects and regions in a particular scene with a high degree of accuracy. Hyperspectral data typically consist of hundreds of thousands of spectra, so the analysis of this information is a key issue. Mathematical morphology theory is a widely used nonlinear technique for image analysis and pattern recognition. Although it is especially well suited to segment binary or grayscale images with irregular and complex shapes, its application in the classification/segmentation of multispectral or hyperspectral images has been quite rare. In this paper, we discuss a new completely automated methodology to find endmembers in the hyperspectral data cube using mathematical morphology. The extension of classic morphology to the hyperspectral domain allows us to integrate spectral and spatial information in the analysis process. In Section 3, some basic concepts about mathematical morphology and the technical details of our algorithm are provided. In Section 4, the accuracy of the proposed method is tested by its application to real hyperspectral data obtained from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) imaging spectrometer. Some details about these data and reference results, obtained by well-known endmember extraction techniques, are provided in Section 2. Finally, in Section 5 we expose the main conclusions at which we have arrived.

Mapping the Distribution of Wildfire Fuels Using AVIRIS in the Santa Monica Mountains

NASA Technical Reports Server (NTRS)

Roberts, Dar; Gardner, M.; Regelbrugge, J.; Pedreros, D.; Ustin, S.

1998-01-01

Catastrophic wildfires, such as the 1990 Painted Cave Fire in Santa Barbara or Oakland fire of 1991, attest to the destructive potential of fire in the wildland/urban interface. For example, during the Painted Cave Fire, 673 structures were consumed over a period of only six hours at an estimated cost of 250 million dollars (Gomes et al., 1993). One of the primary sources of fuels is chaparral, which consists of plant species that are adapted to frequent fires and may actually promote its ignition and spread of through volatile organic compounds in foliage. As one of the most widely distributed plant communities in Southern California, and one of the most common vegetation types along the wildland urban interface, chaparral represents one of the greatest sources of wildfire hazard in the region. An ongoing NASA funded research project was initiated in 1994 to study the potential of AVIRIS for mapping wildfire fuel properties in Southern California chaparral. The project was initiated in the Santa Monica Mountains, an east-west trending range in western Los Angeles County that has experienced extremely high fire frequencies over the past 70 years. The Santa Monica Mountains were selected because they exemplify many of the problems facing the southwest, forming a complex mosaic of land ownership intermixed with a diversity of chaparral age classes and fuel loads. Furthermore, the area has a wide diversity of chaparral community types and a rich background in supporting geographic information including fire history, soils and topography. Recent fires in the Santa Monica Mountains, including several in 1993 and the Calabasas fire of 1996 attest to the active fire regime present in the area. The long term objectives of this project are to improve existing maps of wildland fuel properties in the area, link AVIRIS derived products to fuel models under development for the region, then predict fire hazard through models that simulate fire spread. In this paper, we describe the AVIRIS derived products we are developing to map wildland fuels.

Estimating chlorophyll content and bathymetry of Lake Tahoe using AVIRIS data

NASA Technical Reports Server (NTRS)

Hamilton, Michael K.; Davis, Curtiss O.; Rhea, W. J.; Pilorz, Stuart H.; Carder, Kendall L.

1993-01-01

Data on chlorophyll content and bathymetry of Lake Tahoe obtained on August 9, 1990 by the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) are compared to concurrent in situ surface and in-water measurements. Measured parameters included profiles of percent transmission of monochromatic light, stimulated chlorophyll fluorescence, photosynthetically available radiation, spectral upwelling and downwelling irradiance, and upwelling radiance. Several analyses were performed illustrating the utility of the AVIRIS over a dark water scene. Image-derived chlorophyll concentration compared extremely well with that measured with bottle samples. A bathymetry map of the shallow parts of the lake was constructed which compares favorably with published lake soundings.

First results from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS)

NASA Technical Reports Server (NTRS)

Vane, Gregg

1987-01-01

After engineering flights aboard the NASA U-2 research aircraft in the winter of 1986 to 1987 and spring of 1987, extensive data collection across the United States was begun with the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) in the summer of 1987 in support of a NASA data evaluation and technology assessment program. This paper presents some of the first results obtained from AVIRIS. Examples of spectral imagery acquired over Mountain View and Mono Lake, California, and the Cuprite Mining District in western Nevada are presented. Sensor performance and data quality are described, and in the final section of this paper, plans for the future are discussed.

AVIRIS onboard data handling and control

NASA Technical Reports Server (NTRS)

Steinkraus, Ronald E.; Hickok, Roger W.

1987-01-01

The timing and flow of detector and ancillary data for the Airborne Visible/Infrared imaging spectrometer (AVIRIS) are controlled within the instrument by its digital electronics assembly. In addition to providing detector and signal chain timing, the digital electronics receives, formats, and rate-buffers digitized science data; collects and formats ancillary (calibration and engineering) data; and merges both into a single tape record. Overall AVIRIS data handling is effected by a combination of dedicated digital electronics to control instrument timing, image data flow, and data rate buffering and a microcomputer programmed to handle real-time control of instrument mechanisms and the coordinated preparation of ancillary data.

Low Altitude AVIRIS Data for Mapping Landform Types on West Ship Island, Mississippi

NASA Technical Reports Server (NTRS)

Spruce, Joseph; Otvos, Ervin; Giardino, Marco

2002-01-01

This paper presents a viewgraph presentation on low altitude AVIRIS data for mapping landform types on West Ship Island, Mississippi. The topics of discussion include: 1) Project background; 2) Mapping methods; 3) Examples of results; 4) Apparent trends; and 5) Final remarks.

AVIRIS spectral trajectories for forested areas of the Gifford Pinchot National Forest

NASA Technical Reports Server (NTRS)

Sabol, Donald E., Jr.; Smith, Milton O.; Adams, John B.; Zukin, Janet H.; Tucker, Compton J.; Roberts, Dar A.; Gillespie, Alan R.

1995-01-01

A simple mixing model employing reference endmembers (green vegetation, non-photosynthetic vegetation, soil and shade), and using 180 AVIRIS bands, was used to establish an interpretive framework for a forested area in the Pacific Northwest. A regrowth trend, based on changes in the endmember proportions, was defined for conifers that extends from clearcuts to mature forest, and by implication to old growth. Deciduous species within replanted forest plots caused the fractions to be displaced from the main coniferous regrowth trend and to move toward the green vegetation fraction. The results indicate that the spectral information in AVIRIS can be inverted to estimate approximate stand age and relative proportion of deciduous species in the context of the area studied. Using AVIRIS we measured a 3 to 5 percent increase in woody material in old-growth forest, as distinct from other mature forest. This result is consistent with a predicted increase in NPV in old-growth forest, based on field observations. Previous application of the mixing analysis to a TM image of the same area separated old growth based solely on the shade fraction; however the approach required successful removal of shade introduced by topography. Our new results suggest that with the high spectral resolution and high signal-to-noise of AVIRIS images it may be possible to characterize and map old-growth forests in the Northwest using both the NPV fraction and shade.

BOREAS RSS-4 1994 Jack Pine Leaf Biochemistry and Modeled Spectra in the SSA

NASA Technical Reports Server (NTRS)

Hall, Forrest G. (Editor); Nickeson, Jaime (Editor); Plummer, Stephen; Lucas, Neil; Dawson, Terry

2000-01-01

The BOREAS RSS-4 team focused its efforts on deriving estimates of LAI and leaf chlorophyll and nitrogen concentrations from remotely sensed data for input into the Forest BGC model. This data set contains measurements of jack pine (Pinus banksiana) needle biochemistry from the BOREAS SSA in July and August 1994. The data contain measurements of current and year-1 needle chlorophyll, nitrogen, lignin, cellulose, and water content for the OJP flux tower and nearby auxiliary sites. The data have been used to test a needle reflectance and transmittance model, LIBERTY (Dawson et al., in press). The source code for the model and modeled needle spectra for each of the sampled tower and auxiliary sites are provided as part of this data set. The LIBERTY model was developed and the predicted spectral data generated to parameterize a canopy reflectance model (North, 1996) for comparison with AVIRIS, POLDER, and PARABOLA data. The data and model source code are stored in ASCII files.

Classification of high dimensional multispectral image data

NASA Technical Reports Server (NTRS)

Hoffbeck, Joseph P.; Landgrebe, David A.

1993-01-01

A method for classifying high dimensional remote sensing data is described. The technique uses a radiometric adjustment to allow a human operator to identify and label training pixels by visually comparing the remotely sensed spectra to laboratory reflectance spectra. Training pixels for material without obvious spectral features are identified by traditional means. Features which are effective for discriminating between the classes are then derived from the original radiance data and used to classify the scene. This technique is applied to Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data taken over Cuprite, Nevada in 1992, and the results are compared to an existing geologic map. This technique performed well even with noisy data and the fact that some of the materials in the scene lack absorption features. No adjustment for the atmosphere or other scene variables was made to the data classified. While the experimental results compare favorably with an existing geologic map, the primary purpose of this research was to demonstrate the classification method, as compared to the geology of the Cuprite scene.

Classification by diagnosing all absorption features (CDAF) for the most abundant minerals in airborne hyperspectral images

NASA Astrophysics Data System (ADS)

Mobasheri, Mohammad Reza; Ghamary-Asl, Mohsen

2011-12-01

Imaging through hyperspectral technology is a powerful tool that can be used to spectrally identify and spatially map materials based on their specific absorption characteristics in electromagnetic spectrum. A robust method called Tetracorder has shown its effectiveness at material identification and mapping, using a set of algorithms within an expert system decision-making framework. In this study, using some stages of Tetracorder, a technique called classification by diagnosing all absorption features (CDAF) is introduced. This technique enables one to assign a class to the most abundant mineral in each pixel with high accuracy. The technique is based on the derivation of information from reflectance spectra of the image. This can be done through extraction of spectral absorption features of any minerals from their respected laboratory-measured reflectance spectra, and comparing it with those extracted from the pixels in the image. The CDAF technique has been executed on the AVIRIS image where the results show an overall accuracy of better than 96%.

Lithologic discrimination and alteration mapping from AVIRIS Data, Socorro, New Mexico

NASA Technical Reports Server (NTRS)

Beratan, K. K.; Delillo, N.; Jacobson, A.; Blom, R.; Chapin, C. E.

1993-01-01

Geologic maps are, by their very nature, interpretive documents. In contrasts, images prepared from AVIRIS data can be used as uninterpreted, and thus unbiased, geologic maps. We are having significant success applying AVIRIS data in this non-quantitative manner to geologic problems. Much of our success has come from the power of the Linked Windows Interactive Data System. LinkWinds is a visual data analysis and exploration system under development at JPL which is designed to rapidly and interactively investigate large multivariate data sets. In this paper, we present information on the analysis technique, and preliminary results from research on potassium metasomatism, a distinctive and structurally significant type of alteration associated with crustal extension.

REMOTE SENSING OF PAMLICO SOUND PLANKTON COMMUNITIES USING AVIRIS DATA

EPA Science Inventory

The U.S. EPA, in cooperation with NASA, NOAA and the University of North Carolina, has acquired AVIRIS hyperspectral data and high altitude (ER2) color infrared aerial photography (1: 65,000-scale) for the Pamlico Sound in North Carolina on May 15, 2002. The Pamlico Sound is a hi...

Calibration Of Airborne Visible/IR Imaging Spectrometer

NASA Technical Reports Server (NTRS)

Vane, G. A.; Chrien, T. G.; Miller, E. A.; Reimer, J. H.

1990-01-01

Paper describes laboratory spectral and radiometric calibration of Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) applied to all AVIRIS science data collected in 1987. Describes instrumentation and procedures used and demonstrates that calibration accuracy achieved exceeds design requirements. Developed for use in remote-sensing studies in such disciplines as botany, geology, hydrology, and oceanography.

The AVIRIS Low Altitude Option-An Approach to Increase Geometric Resolution and Improve Operational Flexibility Simultaneously

NASA Technical Reports Server (NTRS)

Sarture, Charles M.; Chovit, Christopher J.; Chrien, Thomas G.; Eastwood, Michael L.; Green, Robert O.; Kurzwell, Charles G.

1998-01-01

From 1987 through 1997 the Airborne Visible-InfraRed Imaging Spectrometer has matured into a remote sensing instrument capable of producing prodigious amounts of high quality data. Using the NASA/Ames ER-2 high altitude aircraft platform, flight operations have become very reliable as well. Being exclusively dependent on the ER-2, however, has limitations: the ER-2 has a narrow cruise envelope which fixes the AVIRIS ground pixel at 20 meters; it requires a significant support infrastructure; and it has a very limited number of bases it can operate from. In the coming years, the ER-2 will also become less available for AVIRIS flights as NASA Earth Observing System satellite underflights increase. Adapting AVIRIS to lower altitude, less specialized aircraft will create a much broader envelope for data acquisition, i.e., higher ground geometric resolution while maintaining nearly the ideal spatial sampling. This approach will also greatly enhance flexibility while decreasing the overall cost of flight operations and field support. Successful adaptation is expected to culminate with a one-month period of demonstration flights.

Utility of high-altitude infrared spectral data in mineral exploration: Application to Northern Patagonia Mountains, Arizona

USGS Publications Warehouse

Berger, B.R.; King, T.V.V.; Morath, L.C.; Phillips, J.D.

2003-01-01

Synoptic views of hydrothermal alteration assemblages are of considerable utility in regional-scale minerals exploration. Recent advances in data acquisition and analysis technologies have greatly enhanced the usefulness of remotely sensed imaging spectroscopy for reliable alteration mineral assemblages mapping. Using NASA's Airborne Visible Infrared Imaging Spectrometer (AVIRIS) sensor, this study mapped large areas of advanced argillic and phyllic-argillic alteration assemblages in the southeastern Santa Rita and northern Patagonia mountains, Arizona. Two concealed porphyry copper deposits have been identified during past exploration, the Red Mountain and Sunnyside deposits, and related published hydrothermal alteration zoning studies allow the comparison of the results obtained from AVIRIS data to the more traditional field mapping approaches. The AVIRIS mapping compares favorably with field-based studies. An analysis of iron-bearing oxide minerals above a concealed supergene chalcocite deposit at Red Mountain also indicates that remotely sensed data can be of value in the interpretation of leached caps above porphyry copper deposits. In conjunction with other types of geophysical data, AVIRIS mineral maps can be used to discriminate different exploration targets within a region.

Oil slick morphology derived from AVIRIS measurements of the Deepwater Horizon oil spill: Implications for spatial resolution requirements of remote sensors

USGS Publications Warehouse

Sun, Shaojie; Hu, Chuanmin; Feng, Lian; Swayze, Gregg A.; Holmes, Jamie; Graettinger, George; MacDonald, Ian R.; Garcia, Oscar; Leifer, Ira

2016-01-01

Using fine spatial resolution (~ 7.6 m) hyperspectral AVIRIS data collected over the Deepwater Horizon oil spill in the Gulf of Mexico, we statistically estimated slick lengths, widths and length/width ratios to characterize oil slick morphology for different thickness classes. For all AVIRIS-detected oil slicks (N = 52,100 continuous features) binned into four thickness classes (≤ 50 μm but thicker than sheen, 50–200 μm, 200–1000 μm, and > 1000 μm), the median lengths, widths, and length/width ratios of these classes ranged between 22 and 38 m, 7–11 m, and 2.5–3.3, respectively. The AVIRIS data were further aggregated to 30-m (Landsat resolution) and 300-m (MERIS resolution) spatial bins to determine the fractional oil coverage in each bin. Overall, if 50% fractional pixel coverage were to be required to detect oil with thickness greater than sheen for most oil containing pixels, a 30-m resolution sensor would be needed.

Measurement of the Spectral Absorption of Liquid Water in Melting Snow With an Imaging Spectrometer

NASA Technical Reports Server (NTRS)

Green, Robert O.; Dozier, Jeff

1995-01-01

Melting of the snowpack is a critical parameter that drives aspects of the hydrology in regions of the Earth where snow accumulates seasonally. New techniques for measurement of snow melt over regional scales offer the potential to improve monitoring and modeling of snow-driven hydrological processes. In this paper we present the results of measuring the spectral absorption of liquid water in a melting snowpack with the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS). AVIRIS data were acquired over Mammoth Mountain, in east central California on 21 May 1994 at 18:35 UTC. The air temperature at 2926 m on Mammoth Mountain at site A was measured at 15-minute intervals during the day preceding the AVIRIS data acquisition. At this elevation. the air temperature did not drop below freezing the night of the May 20 and had risen to 6 degrees Celsius by the time of the overflight on May 21. These temperature conditions support the presence of melting snow at the surface as the AVIRIS data were acquired.

Mapping methane emissions using the airborne imaging spectrometer AVIRIS-NG

NASA Astrophysics Data System (ADS)

Thorpe, A. K.; Frankenberg, C.; Thompson, D. R.; Duren, R. M.; Bue, B. D.; Green, R. O.

2017-12-01

The next generation Airborne Visible/Infrared Imaging Spectrometer (AVIRIS-NG) has been used to survey large regions and map methane plumes with unambiguous identification of emission source locations. This capability is aided by real time detection and geolocation of gas plumes, permitting adaptive surveys and communication to ground teams for rapid follow up. We present results from AVIRIS-NG flight campaigns in Colorado, New Mexico, and California. Hundreds of plumes were observed, reflecting emissions from the energy sector that include hydraulic fracturing, gas processing plants, tanks, pumpjacks, and pipeline leaks. In some cases, plumes observed by AVIRIS-NG resulted in mitigation. Additional examples will be shown for methane from dairy lagoons, landfills, natural emissions, as well as carbon dioxide from power plants and refineries. We describe the unique capabilities of airborne imaging spectrometers to augment other measurement techniques by efficiently surveying key regions for methane point sources and supporting timely assessment and mitigation. We summarize the outlook for near- and longer-term monitoring capabilities including future satellite systems. Figure caption. AVIRIS-NG true color image subset with superimposed methane plume showing retrieved gas concentrations. Plume extends 200 m downwind of the southern edge of the well pad. Google Earth imagery with finer spatial resolution is also included (red box), indicating that tanks in the inset scene as the source of emissions. Five wells are located at the center of this well pad and all use horizontal drilling to produce mostly natural gas.

Expert system-based mineral mapping using AVIRIS

NASA Technical Reports Server (NTRS)

Kruse, Fred A.; Lefkoff, A. B.; Dietz, J. B.

1992-01-01

Integrated analysis of imaging spectrometer data and field spectral measurements were used in conjunction with conventional geologic field mapping to characterize bedrock and surficial geology at the northern end of Death Valley, California and Nevada. A knowledge-based expert system was used to automatically produce image maps from Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data showing the principal surface mineralogy. The imaging spectrometer data show the spatial distribution of spectrally distinct minerals occurring both as primary rock-forming minerals and as alteration and weathering products. Field spectral measurements were used to verify the mineral maps and field mapping was used to extend the remote sensing results. Geographically referenced image-maps produced from these data form new base maps from which to develop improved understanding of the processes of deposition and erosion affecting the present land surface. The 'northern Grapevine Mountains' (NGM) study area was reported on in numerous papers. This area is an unnamed northwestward extension of the range. Most of the research here has concentrated on mapping of Jurassic-age plutons and associated hydrothermal alteration, however, the nature and scope of these studies is much broader, pertaining to the geologic history and development of the entire Death Valley region. AVIRIS data for the NGM site were obtained during May 1989. Additional AVIRIS data were acquired during September 1989 as part of the Geologic Remote Sensing Field Experiment (GRSFE). The area covered by these data overlaps slightly with the May 1989 data. Three and one-half AVIRIS scenes total were analyzed.

Investigations on the 1.7 micron residual absorption feature in the vegetation reflection spectrum

NASA Technical Reports Server (NTRS)

Verdebout, J.; Jacquemoud, S.; Andreoli, G.; Hosgood, B.; Sieber, A.

1993-01-01

The detection and interpretation of the weak absorption features associated with the biochemical components of vegetation is of great potential interest to a variety of applications ranging from classification to global change studies. This recent subject is also challenging because the spectral signature of the biochemicals is only detectable as a small distortion of the infrared spectrum which is mainly governed by water. Furthermore, the interpretation is complicated by complexity of the molecules (lignin, cellulose, starch, proteins) which contain a large number of different and common chemical bonds. In this paper, we present investigations on the absorption feature centered at 1.7 micron; these were conducted both on AVIRIS data and laboratory reflectance spectra of leaves.

Mapping hydrothermally altered rocks at Cuprite, Nevada, using the advanced spaceborne thermal emission and reflection radiometer (Aster), a new satellite-imaging system

USGS Publications Warehouse

Rowan, L.C.; Hook, S.J.; Abrams, M.J.; Mars, J.C.

2003-01-01

The Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) is a 14-band multispectral instrument on board the Earth Observing System (EOS), TERRA. The three bands between 0.52 and 0.86 ??m and the six bands from 1.60 and 2.43 ??m, which have 15- and 30-m spatial resolution, respectively, were selected primarily for making remote mineralogical determinations. The Cuprite, Nevada, mining district comprises two hydrothermal alteration centers where Tertiary volcanic rocks have been hydrothermally altered mainly to bleached silicified rocks and opalized rocks, with a marginal zone of limonitic argilized rocks. Country rocks are mainly Cambrian phyllitic siltstone and limestone. Evaluation of an ASTER image of the Cuprite district shows that spectral reflectance differences in the nine bands in the 0.52 to 2.43 ??m region provide a basis for identifying and mapping mineralogical components which characterize the main hydrothermal alteration zones: opal is the spectrally dominant mineral in the silicified zone; whereas, alunite and kaolinite are dominant in the opalized zone. In addition, the distribution of unaltered country rocks was mapped because of the presence of spectrally dominant muscovite in the siltstone and calcite in limestone, and the tuffaceous rocks and playa deposits were distinguishable due to their relatively flat spectra and weak absorption features at 2.33 and 2.20 ??m, respectively. An Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) image of the study area was processed using a similar methodology used with the ASTER data. Comparison of the ASTER and AVIRIS results shows that the results are generally similar, but the higher spectral resolution of AVIRIS (224 bands) permits identification of more individual minerals, including certain polymorphs. However, ASTER has recorded images of more than 90 percent of the Earth's land surface with less than 20 percent cloud cover, and these data are available at nominal or no cost. Landsat TM images have a similar spatial resolution to ASTER images, but TM has fewer bands, which limits its usefulness for making mineral determinations.

Mapping of the Ronda peridotite massif (Spain) from AVIRIS spectro-imaging survey: A first attempt

NASA Technical Reports Server (NTRS)

Pinet, P. C.; Chabrillat, S.; Ceuleneer, G.

1993-01-01

In both AVIRIS and ISM data, through the use of mixing models, geological boundaries of the Ronda massif are identified with respect to the surrounding rocks. We can also yield first-order vegetation maps. ISM and AVIRIS instruments give consistent results. On the basis of endmember fraction images, it is then possible to discard areas highly vegetated or not belonging to the peridotite massif. Within the remaining part of the mosaic, spectro-mixing analysis reveals spectral variations in the peridotite massif between the well-exposed areas. Spatially organized units are depicted, related to differences in the relative depth of the absorption band at 1 micron, and it may be due to a different pyroxene content. At this stage, it is worth noting that, although mineralogical variations observed in the rocks are at a sub-pixel scale for the airborne analysis, we see an emerging spatial pattern in the distribution of spectral variations across the massif which might be prevailingly related to mineralogy. Although it is known from fieldwork that the Ronda peridotite massif exhibits mineralogical variations at local scale in the content of pyroxene, and at regional scale in different mineral facies, ranging from garnet-, to spinel- to plagioclase-lherzolites, no attempt has been done yet to produce a synoptic map relating the two scales of analysis. The present work is a first attempt to reach this objective, though a lot more work is still required. In particular, for the purpose of mineralogical interpretation, it is critical to relate the airborne observation to field work and laboratory spectra of Ronda rocks already obtained, with the use of image endmembers and associated reference endmembers. Also, the pretty rough linear mixing model used here is taken as a 'black-box' process which does not necessarily apply correctly to the physical situation at the sub-pixel level. One may think of using the ground-truth observations bearing on the sub-pixel statistical characteristics (texture, structural pattern, surface distribution and vegetation contribution (grass,..)) to produce a more advanced mixing model, physically appropriate to the geologic and environmental contexts.

Using AVIRIS data and multiple-masking techniques to map urban forest trees species

Treesearch

Q. Xiao; S.L. Ustin; E.G. McPherson

2004-01-01

Tree type and species information are critical parameters for urban forest management, benefit cost analysis and urban planning. However, traditionally, these parameters have been derived based on limited field samples in urban forest management practice. In this study we used high-resolution Airborne Visible Infrared Imaging Spectrometer (AVIRIS) data and multiple-...

MODTRAN cloud and multiple scattering upgrades with application to AVIRIS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Berk, A.; Bernstein, L.S.; Acharya, P.K.

1998-09-01

Recent upgrades to the MODTRAN atmospheric radiation code improve the accuracy of its radiance predictions, especially in the presence of clouds and thick aerosols, and for multiple scattering in regions of strong molecular line absorption. The current public-released version of MODTRAN (MODTRAN3.7) features a generalized specification of cloud properties, while the current research version of MODTRAN (MODTRAN4) implements a correlated-k (CK) approach for more accurate calculation of multiple scattered radiance. Comparisons to cloud measurements demonstrate the viability of the CK approach. The impact of these upgrades on predictions for AVIRIS viewing scenarios is discussed for both clear and clouded skies;more » the CK approach provides refined predictions for AVIRIS nadir and near-nadir viewing.« less

Geometric and radiometric preprocessing of airborne visible/infrared imaging spectrometer (AVIRIS) data in rugged terrain for quantitative data analysis

NASA Technical Reports Server (NTRS)

Meyer, Peter; Green, Robert O.; Staenz, Karl; Itten, Klaus I.

1994-01-01

A geocoding procedure for remotely sensed data of airborne systems in rugged terrain is affected by several factors: buffeting of the aircraft by turbulence, variations in ground speed, changes in altitude, attitude variations, and surface topography. The current investigation was carried out with an Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) scene of central Switzerland (Rigi) from NASA's Multi Aircraft Campaign (MAC) in Europe (1991). The parametric approach reconstructs for every pixel the observation geometry based on the flight line, aircraft attitude, and surface topography. To utilize the data for analysis of materials on the surface, the AVIRIS data are corrected to apparent reflectance using algorithms based on MODTRAN (moderate resolution transfer code).

The red edge in arid region vegetation: 340-1060 nm spectra

NASA Technical Reports Server (NTRS)

Ray, Terrill W.; Murray, Bruce C.; Chehbouni, A.; Njoku, Eni

1993-01-01

The remote sensing study of vegetated regions of the world has typically been focused on the use of broad-band vegetation indices such as NDVI. Various modifications of these indices have been developed in attempts to minimize the effect of soil background, e.g., SAVI, or to reduce the effect of the atmosphere, e.g., ARVI. Most of these indices depend on the so-called 'red edge,' the sharp transition between the strong absorption of chlorophyll pigment in visible wavelengths and the strong scattering in the near-infrared from the cellular structure of leaves. These broadband indices tend to become highly inaccurate as the green canopy cover becomes sparse. The advent of high spectral resolution remote sensing instrument such as the Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) has allowed the detection of narrow spectral features in vegetation and there are reports of detection of the red edge even for pixels with very low levels of green vegetation cover by Vane et al. and Elvidge et al., and to characterize algal biomass in coastal areas. Spectral mixing approaches similar to those of Smith et al. can be extended into the high spectral resolution domain allowing for the analysis of more endmembers, and potentially, discrimination between material with narrow spectral differences. Vegetation in arid regions tends to be sparse, often with small leaves such as the creosote bush. Many types of arid region vegetation spend much of the year with their leaves in a senescent state, i.e., yellow, with lowered chlorophyll pigmentation. The sparseness of the leaves of many arid region plants has the dual effect of lowering the green leaf area which can be observed and of allowing more of the sub-shrub soil to be visible which further complicates the spectrum of a region covered with arid region vegetation. Elvidge examined the spectral characteristics of dry plant materials showing significant differences in the region of the red edge and the diagnostic ligno-cellulose absorptions at 2090 nm and 2300 nm. Ray et al. detected absorption at 2100 nm in AVIRIS spectra of an abandoned field known to be covered by a great deal of dead plant litter. In order to better study arid region vegetation remote sensing data, it is necessary to better characterize the reflectance spectra of in situ, living, arid region plants.

Spectral assessment of new ASTER SWIR surface reflectance data products for spectroscopic mapping of rocks and minerals

USGS Publications Warehouse

Mars, J.C.; Rowan, L.C.

2010-01-01

ASTER reflectance spectra from Cuprite, Nevada, and Mountain Pass, California, were compared to spectra of field samples and to ASTER-resampled AVIRIS reflectance data to determine spectral accuracy and spectroscopic mapping potential of two new ASTER SWIR reflectance datasets: RefL1b and AST_07XT. RefL1b is a new reflectance dataset produced for this study using ASTER Level 1B data, crosstalk correction, radiance correction factors, and concurrently acquired level 2 MODIS water vapor data. The AST_07XT data product, available from EDC and ERSDAC, incorporates crosstalk correction and non-concurrently acquired MODIS water vapor data for atmospheric correction. Spectral accuracy was determined using difference values which were compiled from ASTER band 5/6 and 9/8 ratios of AST_07XT or RefL1b data subtracted from similar ratios calculated for field sample and AVIRIS reflectance data. In addition, Spectral Analyst, a statistical program that utilizes a Spectral Feature Fitting algorithm, was used to quantitatively assess spectral accuracy of AST_07XT and RefL1b data.Spectral Analyst matched more minerals correctly and had higher scores for the RefL1b data than for AST_07XT data. The radiance correction factors used in the RefL1b data corrected a low band 5 reflectance anomaly observed in the AST_07XT and AST_07 data but also produced anomalously high band 5 reflectance in RefL1b spectra with strong band 5 absorption for minerals, such as alunite. Thus, the band 5 anomaly seen in the RefL1b data cannot be corrected using additional gain adjustments. In addition, the use of concurrent MODIS water vapor data in the atmospheric correction of the RefL1b data produced datasets that had lower band 9 reflectance anomalies than the AST_07XT data. Although assessment of spectral data suggests that RefL1b data are more consistent and spectrally more correct than AST_07XT data, the Spectral Analyst results indicate that spectral discrimination between some minerals, such as alunite and kaolinite, are still not possible unless additional spectral calibration using site specific spectral data are performed. ?? 2010.

Evaluation of the Use of Dark and Bright Targets for the In-Flight Calibration of AVIRIS

NASA Technical Reports Server (NTRS)

Thome, K.; Parada, R.; Schiller, S.; Conel, J.; LaMarr, J.

1998-01-01

During a field campaign at Lake Tahoe on June 22, 1995, calibrations of AVIRIS were attempted using both the reflectance-based and radiance-based methods. This experiment shows that the use of dark water targets to calibrate radiometric sensors can result in meaningful sensor characterization. In particular, the reflectance-based method shows promise towards meeting the desired 2-3% uncertainty levels for ocean color sensors since experimental agreement of better than 1.5% is found for the Lake Tahoe AVIRIS experiment. Similarly promising results were found from reflectance-based calibrations at Lunar Lake with large portions of the spectrum having less than a 5% difference between the reflectance-based predictions and the measured AVIRIS radiances. These results are still in the preliminary stage and it is likely that further study of this data set will lead to even better agreement. The results of the radiance-based calibration at Lake Tahoe are quite good at the shorter wavelengths where atmospheric scattering leads to larger signals and smaller effects of specularly reflected solar energy. The results also showed the sensitivity to radiometer pointing when using water targets for vicarious calibration.

Comparison of laboratory calibrations of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) at the beginning and end of the first flight season

NASA Technical Reports Server (NTRS)

Vane, Gregg; Chrien, Thomas G.; Reimer, John H.; Green, Robert O.; Conel, James E.

1988-01-01

Spectral and radiometric calibrations of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) were performed in the laboratory in June and November, 1987, at the beginning and end of the first flight season. Those calibrations are described along with changes in instrument characteristics that occurred during the flight season as a result of factors such as detachment of the optical fibers to two of the four AVIRIS spectrometers, degradation in the optical alignment of the spectrometers due to thermally-induced and mechanical warpage, and breakage of a thermal blocking filter in one of the spectrometers. These factors caused loss of signal in three spectrometers, loss of spectral resolution in two spectrometers, and added uncertainty in the radiometry of AVIRIS. Results from in-flight assessment of the laboratory calibrations are presented. A discussion is presented of improvements made to the instrument since the end of the first flight season and plans for the future. Improvements include: (1) a new thermal control system for stabilizing spectrometer temperatures, (2) kinematic mounting of the spectrometers to the instrument rack, and (3) new epoxy for attaching the optical fibers inside their mounting tubes.

Spatio-temporal dynamics of alpine snow algae measured with multi-year imaging spectrometer data

NASA Astrophysics Data System (ADS)

Painter, T.; Thomas, W. H.; Duval, B.

2003-04-01

The spatio-temporal dynamics of alpine snow algae have not been documented at the basin scale. This study focuses on the interannual variability of the concentration of alga chlamydomonas nivalis as mapped with the Airborne Visible Infrared Imaging Spectrometer (AVIRIS) over the Sierra Nevada, California, USA in the springs of 2000, 2001, and 2002. AVIRIS was flown at high spatial resolution (1.5 m) and medium spatial resolution (8 m) on board the NOAA Twin Otter and the NASA ER-2. AVIRIS data were atmospherically-corrected to apparent surface reflectance using a non-linear least squares vapor-fitting algorithm coupled with the atmospheric transmission MODTRAN4. We calculated algal concentration using a model that relates concentration to the continuum-normalized integral of the coupled chlorophyll-a, b absorption features with peak at 680 nm wavelength in the snow spectral reflectance signatures (Painter et al., 2001, Applied and Environmental Microbiology). The AVIRIS data were georeferenced to a digital elevation model of the Tioga Pass, CA region generated in the NASA Shuttle Radar Topography Mission. Interannual variability in basin-wide concentration and pixel-by-pixel concentration trajectories were evaluated.

The 1991 AVIRIS/POLDER experiment in Camargue, France

NASA Technical Reports Server (NTRS)

Baret, F.; Leprieur, C.; Jacquemoud, S.; Carrere, V.; Gu, X. F.; Steven, M.; Vanderbilt, V.; Hanocq, J. F.; Ustin, Susan L.; Rondeaux, G.

1992-01-01

Airborne campaigns during the eighties provided high spectral resolution data, collected with imaging instruments such as AIS, AVIRIS, FLI, CAESI, and ISM, in order to investigate the relationship with canopy biophysical characteristics. The statistical approaches used to analyze these data do not allow investigation of the causality and the applicability of the observed correlations. Further, statistical studies demonstrated the high degree of redundancy of the spectral information amongst many others. And for retrieving vegetation biophysical characteristics, few results demonstrate the real information gain attributable to the high spectral resolution capability as compared to the use of a few wide wavelength bands. With several new imaging spectrophotometers scheduled for launch during the next 10 years (MERIS, MODIS, HIRIS), progress in the description and understanding of the mechanisms that drive the spectral variation of canopy reflectance is required. Most of these new sensor systems will also have the capability to observe the target under differing view directions. The problem of the combination and the use of the synergy between both the spectral and the directional sources of canopy reflectance variations has to be addressed. Apart from the atmospheric effects, the spectral variation of the light reflected by canopies originates from the leaves, the soil or the other vegetation elements such as branches and fruits. At leaf level, both diffuse reflectance and transmittance may be simulated by simple models, although no accurate information exists on the absorption features of the biochemicals (except water) in the 900-2500nm wavelength range. Many models mimic the directional variability of canopy reflectance at a given wavelength. Combining a leaf spectral model with a canopy directional model provides a powerful tool to analyze this problem. Some of us have initiated such a study, but our approach and theory remain to be tested using canopy data with their complexity, associated experimental error, and atmospheric effects. The main objective of the 1990 POLDER/AVIRIS experiment in Camargue was to provide a consistent data set over various canopies in order to test the applicability of the theory. The experiment, part of the 1991 MAC Europe experiment, involved simultaneous data collection using two sensors: AVIRIS and POLDER which measures the bidirectional and polarization properties of the targets at 670 and 880nm wavebands.

Atmospheric water mapping with the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), Mountain Pass, California

NASA Technical Reports Server (NTRS)

Conel, James E.; Green, Robert O.; Carrere, Veronique; Margolis, Jack S.; Alley, Ronald E.; Vane, Gregg; Bruegge, Carol J.; Gary, Bruce L.

1988-01-01

Observations are given of the spatial variation of atmospheric precipitable water using the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) over a desert area in eastern California, derived using a band ratio method and the 940 nm atmospheric water band and 870 nm continuum radiances. The ratios yield total path water from curves of growth supplied by the LOWTRAN 7 atmospheric model. An independent validation of the AVIRIS-derived column abundance at a point is supplied by a spectral hygrometer calibrated with respect to radiosonde observations. Water values conform to topography and fall off with surface elevation. The edge of the water vapor boundary layer defined by topography is thought to have been recovered. The ratio method yields column abundance estimates of good precision and high spatial resolution.

Derivative Analysis of AVIRIS Data for Crop Stress Detection

NASA Technical Reports Server (NTRS)

Estep, Lee; Carter, Gregory A.; Berglund, Judith

2003-01-01

Low-altitude Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) hyperspectral imagery of a cornfield in Nebraska was used to determine whether derivative analysis methods provided enhanced plant stress detection compared with narrow-band ratios. The field was divided into 20 plots representing 4 replicates each of 5 nitrogen (N) fertilization treatments that ranged from 0 to 200 kg N/ha in 50 kg/ha increments. The imagery yielded a 3 m ground pixel size for 224 spectral bands. Derivative analysis provided no advantage in stress detection compared with the performance of narrow-band indices derived from the literature. This result was attributed to a high leaf area index at the time of overflight (LAI approx. equal to 5 to 6t) and the high signal-to-noise character of the narrow AVIRIS bands.

Derivative Analysis of AVIRIS Hyperspectral Data for the Detection of Plant Stress

NASA Technical Reports Server (NTRS)

Estep, Lee; Berglund, Judith

2001-01-01

A remote sensing campaign was conducted over a U.S. Department of Agriculture test site at Shelton, Nebraska. The test field was set off in blocks that were differentially treated with nitrogen. Four replicates of 0-kg/ha to 200-kg/ha, in 50-kg/ha increments, were present. Low-altitude AVIRIS hyperspectral data were collected over the site in 224 spectral bands. Simultaneously, ground data were collected to support the airborne imagery. In an effort to evaluate published, derivative-based algorithms for the detection of plant stress, different derivative-based approaches were applied to the collected AVIRIS image cube. The results indicate that, given good quality hyperspectral imagery, derivative techniques compare favorably with simple, well known band ratio algorithms for detection of plant stress.

Carbon dioxide of Pu`u`O`o volcanic plume at Kilauea retrieved by AVIRIS hyperspectral data

USGS Publications Warehouse

Spinetti, C.; Carrere, V.; Buongiorno, M. Fabrizia; Sutton, A.J.; Elias, T.

2008-01-01

A remote sensing approach permits for the first time the derivation of a map of the carbon dioxide concentration in a volcanic plume. The airborne imaging remote sensing overcomes the typical difficulties associated with the ground measurements and permits rapid and large views of the volcanic processes together with the measurements of volatile components exolving from craters. Hyperspectral images in the infrared range (1900-2100??nm), where carbon dioxide absorption lines are present, have been used. These images were acquired during an airborne campaign by the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) over the Pu`u` O`o Vent situated at the Kilauea East Rift zone, Hawaii. Using a radiative transfer model to simulate the measured up-welling spectral radiance and by applying the newly developed mapping technique, the carbon dioxide concentration map of the Pu`u` O`o Vent plume were obtained. The carbon dioxide integrated flux rate were calculated and a mean value of 396 ?? 138??t d- 1 was obtained. This result is in agreement, within the measurements errors, with those of the ground measurements taken during the airborne campaign. ?? 2008 Elsevier Inc.

Surface and Atmospheric Parameter Retrieval From AVIRIS Data: The Importance of Non-Linear Effects

NASA Technical Reports Server (NTRS)

Green Robert O.; Moreno, Jose F.

1996-01-01

AVIRIS data represent a new and important approach for the retrieval of atmospheric and surface parameters from optical remote sensing data. Not only as a test for future space systems, but also as an operational airborne remote sensing system, the development of algorithms to retrieve information from AVIRIS data is an important step to these new approaches and capabilities. Many things have been learned since AVIRIS became operational, and the successive technical improvements in the hardware and the more sophisticated calibration techniques employed have increased the quality of the data to the point of almost meeting optimum user requirements. However, the potential capabilities of imaging spectrometry over the standard multispectral techniques have still not been fully demonstrated. Reasons for this are the technical difficulties in handling the data, the critical aspect of calibration for advanced retrieval methods, and the lack of proper models with which to invert the measured AVIRIS radiances in all the spectral channels. To achieve the potential of imaging spectrometry, these issues must be addressed. In this paper, an algorithm to retrieve information about both atmospheric and surface parameters from AVIRIS data, by using model inversion techniques, is described. Emphasis is put on the derivation of the model itself as well as proper inversion techniques, robust to noise in the data and an inadequate ability of the model to describe natural variability in the data. The problem of non-linear effects is addressed, as it has been demonstrated to be a major source of error in the numerical values retrieved by more simple, linear-based approaches. Non-linear effects are especially critical for the retrieval of surface parameters where both scattering and absorption effects are coupled, as well as in the cases of significant multiple-scattering contributions. However, sophisticated modeling approaches can handle such non-linear effects, which are especially important over vegetated surfaces. All the data used in this study were acquired during the 1991 Multisensor Airborne Campaign (MAC-Europe), as part of the European Field Experiment on a Desertification-threatened Area (EFEDA), carried out in Spain in June-July 1991.

Validating spatial structure in canopy water content using geostatistics

NASA Technical Reports Server (NTRS)

Sanderson, E. W.; Zhang, M. H.; Ustin, S. L.; Rejmankova, E.; Haxo, R. S.

1995-01-01

Heterogeneity in ecological phenomena are scale dependent and affect the hierarchical structure of image data. AVIRIS pixels average reflectance produced by complex absorption and scattering interactions between biogeochemical composition, canopy architecture, view and illumination angles, species distributions, and plant cover as well as other factors. These scales affect validation of pixel reflectance, typically performed by relating pixel spectra to ground measurements acquired at scales of 1m(exp 2) or less (e.g., field spectra, foilage and soil samples, etc.). As image analysis becomes more sophisticated, such as those for detection of canopy chemistry, better validation becomes a critical problem. This paper presents a methodology for bridging between point measurements and pixels using geostatistics. Geostatistics have been extensively used in geological or hydrogeolocial studies but have received little application in ecological studies. The key criteria for kriging estimation is that the phenomena varies in space and that an underlying controlling process produces spatial correlation between the measured data points. Ecological variation meets this requirement because communities vary along environmental gradients like soil moisture, nutrient availability, or topography.

Airborne DOAS retrievals of methane, carbon dioxide, and water vapor concentrations at high spatial resolution: application to AVIRIS-NG

NASA Astrophysics Data System (ADS)

Thorpe, Andrew K.; Frankenberg, Christian; Thompson, David R.; Duren, Riley M.; Aubrey, Andrew D.; Bue, Brian D.; Green, Robert O.; Gerilowski, Konstantin; Krings, Thomas; Borchardt, Jakob; Kort, Eric A.; Sweeney, Colm; Conley, Stephen; Roberts, Dar A.; Dennison, Philip E.

2017-10-01

At local scales, emissions of methane and carbon dioxide are highly uncertain. Localized sources of both trace gases can create strong local gradients in its columnar abundance, which can be discerned using absorption spectroscopy at high spatial resolution. In a previous study, more than 250 methane plumes were observed in the San Juan Basin near Four Corners during April 2015 using the next-generation Airborne Visible/Infrared Imaging Spectrometer (AVIRIS-NG) and a linearized matched filter. For the first time, we apply the iterative maximum a posteriori differential optical absorption spectroscopy (IMAP-DOAS) method to AVIRIS-NG data and generate gas concentration maps for methane, carbon dioxide, and water vapor plumes. This demonstrates a comprehensive greenhouse gas monitoring capability that targets methane and carbon dioxide, the two dominant anthropogenic climate-forcing agents. Water vapor results indicate the ability of these retrievals to distinguish between methane and water vapor despite spectral interference in the shortwave infrared. We focus on selected cases from anthropogenic and natural sources, including emissions from mine ventilation shafts, a gas processing plant, tank, pipeline leak, and natural seep. In addition, carbon dioxide emissions were mapped from the flue-gas stacks of two coal-fired power plants and a water vapor plume was observed from the combined sources of cooling towers and cooling ponds. Observed plumes were consistent with known and suspected emission sources verified by the true color AVIRIS-NG scenes and higher-resolution Google Earth imagery. Real-time detection and geolocation of methane plumes by AVIRIS-NG provided unambiguous identification of individual emission source locations and communication to a ground team for rapid follow-up. This permitted verification of a number of methane emission sources using a thermal camera, including a tank and buried natural gas pipeline.

Mapping playa evaporite minerals with AVIRIS data: A first report from death valley, California

USGS Publications Warehouse

Crowley, J.K.

1993-01-01

Efflorescent salt crusts in Death Valley, California, were mapped by using Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data and a recently developed least-squares spectral band-fitting algorithm. Eight different saline minerals were remotely identified, including three borates, hydroboracite, pinnoite, and rivadavite, that have not been previously reported from the Death Valley efflorescent crusts. The three borates are locally important phases in the crusts, and at least one of the minerals, rivadavite, appears to be forming directly from brine. Borates and other evaporite minerals provide a basis for making remote chemical measurements of desert hydrologic systems. For example, in the Eagle Borax Spring area, the AVIRIS mineral maps pointed to elevated magnesium and boron levels in the ground waters, and to the action of chemical divides causing subsurface fractionation of calcium. Many other chemical aspects of playa brines should have an expression in the associated evaporite assemblages. Certain anhydrous evaporites, including anhydrite, glauberite, and thenardite, lack absorption bands in the visible and near-infrared wavelength range, and crusts composed of these minerals could not be characterized by using AVIRIS. In these situations, thermal-infrared remote sensing data may complement visible and near-infrared data for mapping evaporites. Another problem occurred in wet areas of Death Valley, where water absorption caused low signal levels in the 2.0-2.5 ??m wavelength region that obscured any spectral features of evaporite minerals. Despite these difficulties, the results of this study demonstrate the potential for using AVIRIS and other imaging spectrometer data to study playa chemistry. Such data can be useful for understanding chemical linkages between evaporites and ground waters, and will facilitate studies of how desert ground-water regimes change through time in response to climatic and other variables. ?? 1993.

MAC Europe 1991: Evaluation of AVIRIS, GER imaging spectrometry data for the land application testsite Oberpfaffenhofen

NASA Technical Reports Server (NTRS)

Lehmann, F.; Richter, R.; Rothfuss, H.; Werner, K.; Hausknecht, P.; Mueller, A.; Strobl, P.

1992-01-01

During the MAC Europe 91 Campaign, the area of Oberpfaffenhofen including the land application testsite Oberpfaffenhofen was flown by the AVIRIS imaging spectrometer, the GER 2 imaging spectrometer (63 band scanner), and two SAR systems (NASA/JPL AIRSAR and DLR E-SAR). In parallel to the overflights ground spectrometry (ASD, IRIS M IV) and atmospheric measurements were carried out in order to provide data for optical sensor calibration. Ground spectrometry measurements were carried out in the runway area of the DLR research center Oberpfaffenhofen. This area was used as well during the GER 2 European flight campaign EISAC 89 as a calibration target. The land application testsite Oberpfaffenhofen is located 3 km north of the DLR research center. During the MAC Europe 91 Campaign a ground survey was carried out for documentation in the ground information data base (vegetation type, vegetation geometry, soil type, and soil mixture). Crop stands analyzed were corn, barley and rape. The DLR runway area and the land application testsite Oberpfaffenhofen were flown with the AVIRIS on 29 July and with the GER 2 on 12 and 23 July and 3 Sep. AVIRIS and GER 2 scenes were processed and atmospherically corrected for optical data analysis of optical and radar data. For the AVIRIS and the GER 2 scenes, signal-to-noise ratios (SNR) estimates were calculated. An example of the reflectance of 6 calibration targets inside a GER 2 scene of Oberpfaffenhofen is given. SNR values for the GER 2 for a medium albedo target are given. The integrated analysis for the optical and radar data was carried out in cooperation with the DLR Institute for Microwave Technologies.

Comparative analysis of Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), and Hyperspectral Thermal Emission Spectrometer (HyTES) longwave infrared (LWIR) hyperspectral data for geologic mapping

NASA Astrophysics Data System (ADS)

Kruse, Fred A.

2015-05-01

Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and spatially coincident Hyperspectral Thermal Emission Spectrometer (HyTES) data were used to map geology and alteration for a site in northern Death Valley, California and Nevada, USA. AVIRIS, with 224 bands at 10 nm spectral resolution over the range 0.4 - 2.5 μm at 3-meter spatial resolution were converted to reflectance using an atmospheric model. HyTES data with 256 bands at approximately 17 nm spectral resolution covering the 8 - 12 μm range at 4-meter spatial resolution were converted to emissivity using a longwave infrared (LWIR) radiative transfer atmospheric compensation model and a normalized temperature-emissivity separation approach. Key spectral endmembers were separately extracted for each wavelength region and identified, and the predominant material at each pixel was mapped for each range using Mixture-Tuned-Matched Filtering (MTMF), a partial unmixing approach. AVIRIS mapped iron oxides, clays, mica, and silicification (hydrothermal alteration); and the difference between calcite and dolomite. HyTES separated and mapped several igneous phases (not possible using AVIRIS), silicification, and validated separation of calcite from dolomite. Comparison of the material maps from the different modes, however, reveals complex overlap, indicating that multiple materials/processes exist in many areas. Combined and integrated analyses were performed to compare individual results and more completely characterize occurrences of multiple materials. Three approaches were used 1) integrated full-range analysis, 2) combined multimode classification, and 3) directed combined analysis in geologic context. Results illustrate that together, these two datasets provide an improved picture of the distribution of geologic units and subsequent alteration.

Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) spectrometer design and performance

NASA Technical Reports Server (NTRS)

Macenka, Steven A.; Chrisp, Michael P.

1987-01-01

The development of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) has been completed at JPL. This paper outlines the functional requirements of the spectrometer optics subsystem, and describes the spectrometer optical design. The optical subsystem performance is shown in terms of spectral modulation transfer functions, radial energy distributions, and system transmission at selected wavelengths for the four spectrometers. An outline of the spectrometer alignment is included.

Effect of radiance-to-reflectance transformation and atmosphere removal on maximum likelihood classification accuracy of high-dimensional remote sensing data

NASA Technical Reports Server (NTRS)

Hoffbeck, Joseph P.; Landgrebe, David A.

1994-01-01

Many analysis algorithms for high-dimensional remote sensing data require that the remotely sensed radiance spectra be transformed to approximate reflectance to allow comparison with a library of laboratory reflectance spectra. In maximum likelihood classification, however, the remotely sensed spectra are compared to training samples, thus a transformation to reflectance may or may not be helpful. The effect of several radiance-to-reflectance transformations on maximum likelihood classification accuracy is investigated in this paper. We show that the empirical line approach, LOWTRAN7, flat-field correction, single spectrum method, and internal average reflectance are all non-singular affine transformations, and that non-singular affine transformations have no effect on discriminant analysis feature extraction and maximum likelihood classification accuracy. (An affine transformation is a linear transformation with an optional offset.) Since the Atmosphere Removal Program (ATREM) and the log residue method are not affine transformations, experiments with Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data were conducted to determine the effect of these transformations on maximum likelihood classification accuracy. The average classification accuracy of the data transformed by ATREM and the log residue method was slightly less than the accuracy of the original radiance data. Since the radiance-to-reflectance transformations allow direct comparison of remotely sensed spectra with laboratory reflectance spectra, they can be quite useful in labeling the training samples required by maximum likelihood classification, but these transformations have only a slight effect or no effect at all on discriminant analysis and maximum likelihood classification accuracy.

Spectral Variability of Oil Slicks under Different Observing Conditions: Examples from Satellite and Airborne Measurement

NASA Astrophysics Data System (ADS)

Sun, S.; Hu, C.

2017-12-01

Optical remote sensing is one of the most commonly used techniques in detecting oil in the surface ocean. This is because that oil has different optical properties from the surrounding oil-free water and oil can also modulate surface waves, thus providing a spatial contrast to facilitate delineating the oil-water boundary. Estimating oil volume or thickness from the delineated oil footprint, on the other hand, is much more difficult and currently represents a major challenge in remote sensing of oil spills. Several studies have attempted to associate reflectance spectra (magnitude and spectral shape) with oil thickness from experiments under controlled conditions, where such established relationships were used to quantify oil thickness. However, it is unclear whether or how these experiment derived relationships could be used in the real environment. Here, oil pixel spectra were extracted from several satellite sensors including Landsat, MERIS, MODIS and MISR together with airborne sensor AVIRIS that captured during the Deepwater Horizon oil spill in 2010. Same day imagery of these sensors were co-registered to compare spectra difference of oil under different observing conditions. Combining those resulted spectra with laboratory-measured oil spectra in previous study, oil's diverse spectral magnitudes and shapes were presented. Besides oil thickness, we concluded several other potential factors that may contribute significantly to the spectral response of oil slicks in the marine environment, which include sun glint strength, oil emulsification state, optical properties of oil covered water and remote sensing imagery's spatial resolution as well. And future perspectives for more accurate estimation of oil thickness are proposed.

Mapping wetland species and the impact of oil from the Deep Horizon using the Airborne/Visible Imaging Spectrometer and Multiple Endmember Spectral Mixture Analysis

NASA Astrophysics Data System (ADS)

Roberts, D. A.; Beland, M.; Kokaly, R. F.; Couvillion, B.; Ustin, S.; Peterson, S.

2011-12-01

Between April 20, 2010 and July 15, 2010 an estimated 4.4 million barrels of oil leaked from the Maconda well, making the Deep Horizon oil spill the largest in US history. In response to a need to determine the distribution of wetland plant species and quantify their condition prior to, during and after oil reached the shore, the Airborne/Visible Infrared Imaging Spectrometer (AVIRIS) was deployed multiple times in the gulf on high altitude and low altitude airborne platforms. Significant research questions included 1) What is the distribution of key wetland species in the impacted area?; 2) which areas were impacted by oil, when and to what extent?; 3) how much oil must be present to be detected in various cover types? and 4) which wetland species are more sensitive to oil? In an effort to answer some of these questions, we applied Multiple Endmember Spectral Mixture Analysis (MESMA) to AVIRIS data acquired prior to significant impacts in May, 2010 and after oil had reached wetlands in late summer and fall, 2010. Reference polygons for species dominants were located on the images and used to build a spectral library for all dominant wetland species and surface types. This spectral library was augmented by field spectra, acquired using a contact probe for senesced plants materials and beach sands. Spectra of heavily oiled surfaces were identified using the Hydrocarbon Index to identify potential oil endmembers and the Cellulose Absorption Index to discriminate oil from Non-photosynthetic Vegetation (NPV). Wetland species and cover fractions for Green Vegetation (GV), NPV, soils/beaches, oil and water were mapped using MESMA applied to images acquired in the Birds Foot Delta, Chandeleur Islands and Barataria Bay. Species maps, showing dominant species such as Phragmites australis, Spartina alternifolia and S. patens proved to be accurate. OIl was mapped along coastal areas of Barataria Bay, expressed as high oil fractions. However, significant confusion was also observed between oiled vegetation and senesced vegetation, either resulting from oil-induced mortality or natural senescence.

Aerosol Optical Depth Retrieval With AVIRIS Data: A Test of Tafkaa

DTIC Science & Technology

2002-09-01

the spatial resolution . Clearly there is a need for a method of AOD retrieval that can cover more of the globe in a...imagers lack sufficient spectral resolution for some scientific applications. The future of remote sensing is in the ability to collect and interpret...AVIRIS is by using a data cube with two axes for the spatial dimensions and the third axis representing the 224 channels that make up the spectral

Evaluation of Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and Moderate Resolution Imaging Spectrometer (MODIS) measures of live fuel moisture and fuel condition in a shrubland ecosystem in southern California

Treesearch

D. A. Roberts; P.E. Dennison; S. Peterson; S. Sweeney; J. Rechel

2006-01-01

Dynamic changes in live fuel moisture (LFM) and fuel condition modify fire danger in shrublands. We investigated the empirical relationship between field-measured LFM and remotely sensed greenness and moisture measures from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and the Moderate Resolution Imaging Spectrometer (MODIS). Key goals were to assess the...

Proceedings of the 11th JPL Airborne Earth Science Workshop

NASA Technical Reports Server (NTRS)

Green, Robert O.

2002-01-01

This publication contains the proceedings of the JPL Airborne Earth Science Workshop forum held to report science research and applications results with spectral images measured by the NASA Airborne Visible/Infrared Imaging Spectrometer (AVIRIS). These papers were presented at the Jet Propulsion Laboratory from March 5-8, 2001. Electronic versions of these papers may be found at the A VIRIS Web http://popo.jpl.nasa.gov/pub/docs/workshops/aviris.proceedings.html

Mapping the spectral variability in photosynthetic and non-photosynthetic vegetation, soils, and shade using AVIRIS

NASA Technical Reports Server (NTRS)

Roberts, Dar A.; Smith, Milton O.; Sabol, Donald E.; Adams, John B.; Ustin, Susan L.

1992-01-01

The primary objective of this research was to map as many spectrally distinct types of green vegetation (GV), non-photosynthetic vegetation (NPV), shade, and soil (endmembers) in an Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) scene as is warranted by the spectral variability of the data. Once determined, a secondary objective was to interpret these endmembers and their abundances spatially and spectrally in an ecological context.

AVIRIS calibration and application in coastal oceanic environments

NASA Technical Reports Server (NTRS)

Carder, Kendall L.

1992-01-01

The Airborne Visible-Infrared Imaging Spectrometer (AVIRIS) is a test-bed for future spacecraft sensors such as the High-Resolution Imaging Spectrometer and the Moderate-Resolution Imaging Spectrometers planned for the Earth Observing System. To use this sensor for ocean applications, S/N was increased by spatial averaging of images. Post-flight recalibration was accomplished using in situ the water-leaving radiance measured at flight time, modeling radiance transmission to the aircraft, and adding modeled atmospheric radiance to that value. The preflight calibration curve was then adjusted until aircraft and modeled total radiance values matched. Water-leaving radiance values from the recalibrated AVIRIS imagery were consistent with in situ data supporting the validity of the approach. Imagery of the absorption coefficient at 415 nm and backscattering coefficient at 671 nm were used to depict the dissolved and particulate constituents of an ebb-tidal esturance plume on the East coast of Florida.

Estimating the signal-to-noise ratio of AVIRIS data

NASA Technical Reports Server (NTRS)

Curran, Paul J.; Dungan, Jennifer L.

1988-01-01

To make the best use of narrowband airborne visible/infrared imaging spectrometer (AVIRIS) data, an investigator needs to know the ratio of signal to random variability or noise (signal-to-noise ratio or SNR). The signal is land cover dependent and varies with both wavelength and atmospheric absorption; random noise comprises sensor noise and intrapixel variability (i.e., variability within a pixel). The three existing methods for estimating the SNR are inadequate, since typical laboratory methods inflate while dark current and image methods deflate the SNR. A new procedure is proposed called the geostatistical method. It is based on the removal of periodic noise by notch filtering in the frequency domain and the isolation of sensor noise and intrapixel variability using the semi-variogram. This procedure was applied easily and successfully to five sets of AVIRIS data from the 1987 flying season and could be applied to remotely sensed data from broadband sensors.

Geologic remote sensing - New technology, new information

NASA Technical Reports Server (NTRS)

Kruse, F. A.

1992-01-01

Results of geologic studies using data collected by the NASA/JPL Thermal Infrared Imaging Spectrometer (TIMS), Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), and the Airborne Synthetic Aperture Radar (AIRSAR) are discussed. These instruments represent prototypes for the Earth Observing System (EOS) satellite instruments ASTER, High Resolution Imaging Spectrometer (HIRIS), and EOS SAR. Integrated analysis of this data type is one of the keys to successful geologic research using EOS. TIMS links the physical properties of surface materials in the 8-12-*mm region to their composition. Calibrated aircraft data make direct lithological mapping possible. AVIRIS, an analog for HIRIS, provides quantitative information about the surface composition of materials based on their detailed visible and infrared spectral signatures (0.4-2.45 mm). Calibrated AVIRIS data make direct identification of minerals possible. The AIRSAR provides additional complementary information about the surface morphology of rocks and soils.

Empirical relationships among atmospheric variables from rawinsonde and field data as surrogates for AVIRIS measurements: Estimation of regional land surface evapotranspiration

NASA Technical Reports Server (NTRS)

Conel, James E.; Hoover, Gordon; Nolin, Anne; Alley, Ron; Margolis, Jack

1992-01-01

Empirical relationships between variables are ways of securing estimates of quantities difficult to measure by remote sensing methods. The use of empirical functions was explored between: (1) atmospheric column moisture abundance W (gm H2O/cm(sup 2) and surface absolute water vapor density rho(q-bar) (gm H2O/cm(sup 3), with rho density of moist air (gm/cm(sup 3), q-bar specific humidity (gm H2O/gm moist air), and (2) column abundance and surface moisture flux E (gm H2O/(cm(sup 2)sec)) to infer regional evapotranspiration from Airborne Visible/Infrared Imaging Spectrometers (AVIRIS) water vapor mapping data. AVIRIS provides, via analysis of atmospheric water absorption features, estimates of column moisture abundance at very high mapping rate (at approximately 100 km(sup 2)/40 sec) over large areas at 20 m ground resolution.

Remote sensing of smoke, clouds, and radiation using AVIRIS during SCAR experiments

NASA Technical Reports Server (NTRS)

Gao, Bo-Cai; Remer, Lorraine; Kaufman, Yorman J.

1995-01-01

During the past two years, researchers from several institutes joined together to take part in two SCAR experiments. The SCAR-A (Sulfates, Clouds And Radiation - Atlantic) took place in the mid-Atlantic region of the United States in July, 1993. remote sensing data were acquired with the Airborne Visible Infrared Imaging Spectrometer (AVIRIS), the MODIS Airborne Simulator (MAS), and a RC-10 mapping camera from an ER-2 aircraft at 20 km. In situ measurements of aerosol and cloud microphysical properties were made with a variety of instruments equipped on the University of Washington's C-131A research aircraft. Ground based measurements of aerosol optical depths and particle size distributions were made using a network of sunphotometers. The main purpose of SCAR-A experiment was to study the optical, physical and chemical properties of sulfate aerosols and their interaction with clouds and radiation. Sulfate particles are believed to affect the energy balance of the earth by directly reflecting solar radiation back to space and by increasing the cloud albedo. The SCAR-C (Smoke, Clouds And Radiation - California) took place on the west coast areas during September - October of 1994. Sets of aircraft and ground-based instruments, similar to those used during SCAR-A, were used during SCAR-C. Remote sensing of fires and smoke from AVIRIS and MAS imagers on the ER-2 aircraft was combined with a complete in situ characterization of the aerosol and trace gases from the C-131A aircraft of the University of Washington and the Cesna aircraft from the U.S. Forest Service. The comprehensive data base acquired during SCAR-A and SCAR-C will contribute to a better understanding of the role of clouds and aerosols in global change studies. The data will also be used to develop satellite remote sensing algorithms from MODIS on the Earth Observing System.

Analysis of simulated advanced spaceborne thermal emission and reflection (ASTER) radiometer data of the Iron Hill, Colorado, study area for mapping lithologies

USGS Publications Warehouse

Rowan, L.C.

1998-01-01

The advanced spaceborne thermal emission and reflection (ASTER) radiometer was designed to record reflected energy in nine channels with 15 or 30 m resolution, including stereoscopic images, and emitted energy in five channels with 90 m resolution from the NASA Earth Observing System AM1 platform. A simulated ASTER data set was produced for the Iron Hill, Colorado, study area by resampling calibrated, registered airborne visible/infrared imaging spectrometer (AVIRIS) data, and thermal infrared multispectral scanner (TIMS) data to the appropriate spatial and spectral parameters. A digital elevation model was obtained to simulate ASTER-derived topographic data. The main lithologic units in the area are granitic rocks and felsite into which a carbonatite stock and associated alkalic igneous rocks were intruded; these rocks are locally covered by Jurassic sandstone, Tertiary rhyolitic tuff, and colluvial deposits. Several methods were evaluated for mapping the main lithologic units, including the unsupervised classification and spectral curve-matching techniques. In the five thermal-infrared (TIR) channels, comparison of the results of linear spectral unmixing and unsupervised classification with published geologic maps showed that the main lithologic units were mapped, but large areas with moderate to dense tree cover were not mapped in the TIR data. Compared to TIMS data, simulated ASTER data permitted slightly less discrimination in the mafic alkalic rock series, and carbonatite was not mapped in the TIMS nor in the simulated ASTER TIR data. In the nine visible and near-infrared channels, unsupervised classification did not yield useful results, but both the spectral linear unmixing and the matched filter techniques produced useful results, including mapping calcitic and dolomitic carbonatite exposures, travertine in hot spring deposits, kaolinite in argillized sandstone and tuff, and muscovite in sericitized granite and felsite, as well as commonly occurring illite/muscovite. However, the distinction made in AVIRIS data between calcite and dolomite was not consistently feasible in the simulated ASTER data. Comparison of the lithologic information produced by spectral analysis of the simulated ASTER data to a photogeologic interpretation of a simulated ASTER color image illustrates the high potential of spectral analysis of ASTER data to geologic interpretation. This paper is not subject to U.S. copyright. Published in 1998 by the American Geophysical Union.

Airborne Visible/Infrared Imaging Spectrometer (AVIRIS). A description of the sensor, ground data processing facility, laboratory calibration, and first results

NASA Technical Reports Server (NTRS)

Vane, Gregg (Editor)

1987-01-01

The papers in this document were presented at the Imaging Spectroscopy 2 Conference of the 31st International Symposium on Optical and Optoelectronic Applied Science and Engineering, in San Diego, California, on 20 and 21 August 1987. They describe the design and performance of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) sensor and its subsystems, the ground data processing facility, laboratory calibration, and first results.

Comparison of AVIRIS and Landsat ETM+ detection capabilities for burn severity

USGS Publications Warehouse

Van Wagtendonk, Jan W.; Root, Ralph R.; Key, Carl H.

2004-01-01

Our study compares data on burn severity collected from multi-temporal Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) with similar data from the Enhanced Thematic Mapper Plus (ETM+) using the differenced Normalized Burn Ratio (dNBR). Two AVIRIS and ETM+ data acquisitions recorded surface conditions immediately before the Hoover Fire began to spread rapidly and again the following year. Data were validated with 63 field plots using the Composite Burn Index (CBI). The relationship between spectral channels and burn severity was examined by comparing pre- and post-fire datasets. Based on the high burn severity comparison, AVIRIS channels 47 and 60 at wavelengths of 788 and 913 nm showed the greatest negative response to fire. Post-fire reflectance values decreased the most on average at those wavelengths, while channel 210 at 2370 nm showed the greatest positive response on average. Fire increased reflectance the most at that wavelength over the entire measured spectral range. Furthermore, channel 210 at 2370 nm exhibited the greatest variation in spectral response, suggesting potentially high information content for fire severity. Based on general remote sensing principles and the logic of variable spectral responses to fire, dNBR from both sensors should produce useful results in quantifying burn severity. The results verify the band–response relationships to burn severity as seen with ETM+ data and confirm the relationships by way of a distinctly different sensor system.

Accurate reconstruction of hyperspectral images from compressive sensing measurements

NASA Astrophysics Data System (ADS)

Greer, John B.; Flake, J. C.

2013-05-01

The emerging field of Compressive Sensing (CS) provides a new way to capture data by shifting the heaviest burden of data collection from the sensor to the computer on the user-end. This new means of sensing requires fewer measurements for a given amount of information than traditional sensors. We investigate the efficacy of CS for capturing HyperSpectral Imagery (HSI) remotely. We also introduce a new family of algorithms for constructing HSI from CS measurements with Split Bregman Iteration [Goldstein and Osher,2009]. These algorithms combine spatial Total Variation (TV) with smoothing in the spectral dimension. We examine models for three different CS sensors: the Coded Aperture Snapshot Spectral Imager-Single Disperser (CASSI-SD) [Wagadarikar et al.,2008] and Dual Disperser (CASSI-DD) [Gehm et al.,2007] cameras, and a hypothetical random sensing model closer to CS theory, but not necessarily implementable with existing technology. We simulate the capture of remotely sensed images by applying the sensor forward models to well-known HSI scenes - an AVIRIS image of Cuprite, Nevada and the HYMAP Urban image. To measure accuracy of the CS models, we compare the scenes constructed with our new algorithm to the original AVIRIS and HYMAP cubes. The results demonstrate the possibility of accurately sensing HSI remotely with significantly fewer measurements than standard hyperspectral cameras.

Evaluating the Effects of Surface Properties on Methane Detection with the Airborne Visible/Infrared Imaging Spectrometer Next Generation (AVIRIS-NG)

NASA Astrophysics Data System (ADS)

Ayasse, A.; Thorpe, A. K.; Roberts, D. A.; Aubrey, A. D.; Dennison, P. E.; Thompson, D. R.; Frankenberg, C.

2016-12-01

Atmospheric methane has been increasing since the industrial revolution and is thought to be responsible for about 25% of global radiative forcing (Hofman et al., 2006; Montzka et al., 2011). Given the importance of methane to global climate, it is essential that we identify methane sources to better understand the proportion of emissions coming from various sectors. Recently the Airborne Visible-Infrared Imaging Spectrometer Next Generation (AVIRIS-NG) has proven to be a valuable instrument for mapping methane plumes (Frankenberg et al., 2016; Thorpe et al., 2016; Thompson et al., 2015). However, it is important to determine how land cover and albedo affect the ability of AVIRIS-NG to detect methane. This study aims to quantify the effect these surface properties have on detection. To do so we are using a synthetic AVIRIS-NG image that has multiple land cover types, albedos, and methane concentrations and applying the Cluster Tunes Matched Filter (CTMF) algorithm (Funk et al. 2001, Thorpe et al., 2013) to detect methane enhancements within the image. CTMF results are compared to the surface properties to characterize how different surface properties affect detection. We will also evaluate the effect of surface properties with examples of methane plumes observed from oil fields and manure ponds in the San Joaquin Valley of California, two important methane sources (Figure 1). Initial results suggest that darker surfaces, such as water absent sun glint, will make detecting the methane signal challenging, while bright surfaces such as dry soils produce a much clearer signal. Characterizing the effect of surface properties on methane detection is of increasing importance given the application of this technology will likely expand to map methane across a diverse range of emission sources. Figure 1. AVIRIS-NG image acquired Apr. 29, 2015. True color image with a superimposed methane plume from a manure pond. Bright surfaces, such as the dirt road, provide a better surface for retrievals than dark surfaces, such as the vegetation.

Attributing Methane and Carbon Dioxide Emissions from Anthropogenic and Natural Sources Using AVIRIS-NG

NASA Astrophysics Data System (ADS)

Thorpe, A. K.; Frankenberg, C.; Thompson, D. R.; Duren, R. M.; Aubrey, A. D.; Bue, B. D.; Green, R. O.; Gerilowski, K.; Krings, T.; Borchardt, J.; Kort, E. A.; Sweeney, C.; Conley, S. A.; Roberts, D. A.; Dennison, P. E.; Ayasse, A.

2016-12-01

Imaging spectrometers like the next generation Airborne Visible/Infrared Imaging Spectrometer (AVIRIS-NG) can map large regions with the high spatial resolution necessary to resolve methane (CH4) and carbon dioxide (CO2) emissions. This capability is aided by real time detection and geolocation of gas plumes, permitting unambiguous identification of individual emission source locations and communication to ground teams for rapid follow up. We present results from AVIRIS-NG flight campaigns in the Four Corners region (Colorado and New Mexico) and the San Joaquin Valley (California). Over three hundred plumes were observed, reflecting emissions from anthropogenic and natural sources. Examples of plumes will be shown for a number of sources, including CH4 from well completions, gas processing plants, tanks, pipeline leaks, natural seeps, and CO2 from power plants. Despite these promising results, an imaging spectrometer built exclusively for quantitative mapping of gas plumes would have improved sensitivity compared to AVIRIS-NG. For example, an instrument providing a 1 nm spectral sampling (2,000-2,400 micron) would permit mapping CH4, CO2, H2O, CO, and N2O from more diffuse sources using both airborne and orbital platforms. The ability to identify emission sources offers the potential to constrain regional greenhouse gas budgets and improve partitioning between anthropogenic and natural emission sources. Because the CH4 lifetime is only about 9 years and CH4 has a Global Warming Potential 86 times that of CO2 for a 20 year time interval, mitigating these emissions is a particularly cost-effective approach to reduce overall atmospheric radiative forcing. Fig. 1. True color image subset with superimposed gas plumes showing concentrations in ppmm. Left: AVIRIS-NG observed CH4 plumes from natural gas processing plant extending over 500 m downwind of multiple emissions sources. Right: Multiple CO2 plumes observed from coal-fired power plant.

Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) onboard calibration system

NASA Technical Reports Server (NTRS)

Chrien, Thomas G.; Eastwood, Mike; Green, Robert O.; Sarture, Charles; Johnson, Howell; Chovit, Chris; Hajek, Pavel

1995-01-01

The AVIRIS instrument uses an onboard calibration system to provide auxiliary calibration data. The system consist of a tungsten halogen cycle lamp imaged onto a fiber bundle through an eight position filter wheel. The fiber bundle illuminates the back side of the foreoptics shutter during a pre-run and post-run calibration sequence. The filter wheel contains two neutral density filters, five spectral filters and one blocked position. This paper reviews the general workings of the onboard calibrator system and discusses recent modifications.

Summaries of the Sixth Annual JPL Airborne Earth Science Workshop. Volume 1; AVIRIS Workshop

NASA Technical Reports Server (NTRS)

Green, Robert O. (Editor)

1996-01-01

This publication contains the summaries for the Sixth Annual JPL Airborne Earth Science Workshop, held in Pasadena, California, on March 4-8, 1996. The main workshop is divided into two smaller workshops as follows: (1) The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) workshop, on March 4-6. The summaries for this workshop appear in Volume 1; (2) The Airborne Synthetic Aperture Radar (AIRSAR) workshop, on March 6-8. The summaries for this workshop appear in Volume 2.

Signal chain for the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS)

NASA Technical Reports Server (NTRS)

Bunn, James S., Jr.

1988-01-01

The AVIRIS instrument has a separate dedicated analog signal processing chain for each of its four spectrometers. The signal chains amplify low-level focal-plane line array signals (5 to 10 mV full-scale span) in the presence of larger multiplexing signals (approx 150 mV) providing the data handling system a ten-bit digital word (for each spectrometer) each 1.3 microns. This signal chain provides automatic correction for the line array dark signal nonuniformity (which can approach the full-scale signal span).

Signal chain for the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS)

NASA Technical Reports Server (NTRS)

Bunn, James S., Jr.

1987-01-01

The AVIRIS instrument has a separate dedicated analog signal processing chain for each of its four spectrometers. The signal chains amplify low-level focal-plane line array signals (5 to 10 mV full-scale span) in the presence of larger multiplexing signals (approx 150 mV) providing the data handling system a ten-bit digital word (for each spectrometer) each 1.3 microns. This signal chain provides automatic correction for the line array dark signal nonuniformity (which can approach the full-scale signal span).

Algorithm for Lossless Compression of Calibrated Hyperspectral Imagery

NASA Technical Reports Server (NTRS)

Kiely, Aaron B.; Klimesh, Matthew A.

2010-01-01

A two-stage predictive method was developed for lossless compression of calibrated hyperspectral imagery. The first prediction stage uses a conventional linear predictor intended to exploit spatial and/or spectral dependencies in the data. The compressor tabulates counts of the past values of the difference between this initial prediction and the actual sample value. To form the ultimate predicted value, in the second stage, these counts are combined with an adaptively updated weight function intended to capture information about data regularities introduced by the calibration process. Finally, prediction residuals are losslessly encoded using adaptive arithmetic coding. Algorithms of this type are commonly tested on a readily available collection of images from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) hyperspectral imager. On the standard calibrated AVIRIS hyperspectral images that are most widely used for compression benchmarking, the new compressor provides more than 0.5 bits/sample improvement over the previous best compression results. The algorithm has been implemented in Mathematica. The compression algorithm was demonstrated as beneficial on 12-bit calibrated AVIRIS images.

In-flight radiometric calibration of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS)

NASA Technical Reports Server (NTRS)

Conel, James E.; Green, Robert O.; Alley, Ronald E.; Bruegge, Carol J.; Carrere, Veronique; Margolis, Jack S.; Vane, Gregg; Chrien, Thomas G.; Slater, Philip N.; Biggard, Stuart F.

1988-01-01

A reflectance-based method was used to provide an analysis of the in-flight radiometric performance of AVIRIS. Field spectral reflectance measurements of the surface and extinction measurements of the atmosphere using solar radiation were used as input to atmospheric radiative transfer calculations. Five separate codes were used in the analysis. Four include multiple scattering, and the computed radiances from these for flight conditions were in good agreement. Code-generated radiances were compared with AVIRIS-predicted radiances based on two laboratory calibrations (pre- and post-season of flight) for a uniform highly reflecting natural dry lake target. For one spectrometer (C), the pre- and post-season calibration factors were found to give identical results, and to be in agreement with the atmospheric models that include multiple scattering. This positive result validates the field and laboratory calibration technique. Results for the other spectrometers (A, B and D) were widely at variance with the models no matter which calibration factors were used. Potential causes of these discrepancies are discussed.

Mapping the spatial and temporal dynamics of the velvet mesquite with MODIS and AVIRIS: Case study at the Santa Rita Experimental Range

NASA Astrophysics Data System (ADS)

Kaurivi, Jorry Zebby Ujama

The general objective of this research is to develop a methodology that will allow mapping and quantifying shrub encroachment with remote sensing. The multitemporal properties of the Moderate Resolution Imaging Spectroradiometer (MODIS) -250m, 16-day vegetation index products were combined with the hyperspectral and high spatial resolution (3.6m) computation of the Airborne Visible-Infrared Imaging Spectrometer (AVIRIS) to detect the dynamics of mesquite and grass/soil matrix at two sites of high (19.5%) and low (5.7%) mesquite cover in the Santa Rita Experimental Range (SRER). MODIS results showed separability between grassland and mesquite based on phenology. Mesquite landscapes had longer green peak starting in April through February, while the grassland only peaked during the monsoon season (July through October). AVIRIS revealed spectral separability, but high variation in the data implicated high heterogeneity in the landscape. Nonetheless, the methodology for larger data was developed in this study and combines ground, air and satellite data.

Comparison of three methods for materials identification and mapping with imaging spectroscopy

NASA Technical Reports Server (NTRS)

Clark, Roger N.; Swayze, Gregg; Boardman, Joe; Kruse, Fred

1993-01-01

We are comparing three methods of mapping analysis tools for imaging spectroscopy data. The purpose of this comparison is to understand the advantages and disadvantages of each algorithm so others would be better able to choose the best algorithm or combinations of algorithms for a particular problem. The three algorithms are: (1) the spectralfeature modified least squares mapping algorithm of Clark et al (1990, 1991): programs mbandmap and tricorder; (2) the Spectral Angle Mapper Algorithm(Boardman, 1993) found in the CU CSES SIPS package; and (3) the Expert System of Kruse et al. (1993). The comparison uses a ground-calibrated 1990 AVIRIS scene of 400 by 410 pixels over Cuprite, Nevada. Along with the test data set is a spectral library of 38 minerals. Each algorithm is tested with the same AVIRIS data set and spectral library. Field work has confirmed the presence of many of these minerals in the AVIRIS scene (Swayze et al. 1992).

Detection of salt marsh vegetation stress and recovery after the Deepwater Horizon Oil Spill in Barataria Bay, Gulf of Mexico using AVIRIS data.

PubMed

Khanna, Shruti; Santos, Maria J; Ustin, Susan L; Koltunov, Alexander; Kokaly, Raymond F; Roberts, Dar A

2013-01-01

The British Petroleum Deepwater Horizon Oil Spill in the Gulf of Mexico was the biggest oil spill in US history. To assess the impact of the oil spill on the saltmarsh plant community, we examined Advanced Visible Infrared Imaging Spectrometer (AVIRIS) data flown over Barataria Bay, Louisiana in September 2010 and August 2011. Oil contamination was mapped using oil absorption features in pixel spectra and used to examine impact of oil along the oiled shorelines. Results showed that vegetation stress was restricted to the tidal zone extending 14 m inland from the shoreline in September 2010. Four indexes of plant stress and three indexes of canopy water content all consistently showed that stress was highest in pixels next to the shoreline and decreased with increasing distance from the shoreline. Index values along the oiled shoreline were significantly lower than those along the oil-free shoreline. Regression of index values with respect to distance from oil showed that in 2011, index values were no longer correlated with proximity to oil suggesting that the marsh was on its way to recovery. Change detection between the two dates showed that areas denuded of vegetation after the oil impact experienced varying degrees of re-vegetation in the following year. This recovery was poorest in the first three pixels adjacent to the shoreline. This study illustrates the usefulness of high spatial resolution airborne imaging spectroscopy to map actual locations where oil from the spill reached the shore and then to assess its impacts on the plant community. We demonstrate that post-oiling trends in terms of plant health and mortality could be detected and monitored, including recovery of these saltmarsh meadows one year after the oil spill.

Detection of salt marsh vegetation stress and recovery after the Deepwater Horizon Oil Spill in Barataria Bay, Gulf of Mexico using AVIRIS data

USGS Publications Warehouse

Khanna, Shruti; Santos, Maria J.; Ustin, Susan L.; Koltunov, Alexander; Kokaly, Raymond F.; Roberts, Dar A.

2013-01-01

The British Petroleum Deepwater Horizon Oil Spill in the Gulf of Mexico was the biggest oil spill in US history. To assess the impact of the oil spill on the saltmarsh plant community, we examined Advanced Visible Infrared Imaging Spectrometer (AVIRIS) data flown over Barataria Bay, Louisiana in September 2010 and August 2011. Oil contamination was mapped using oil absorption features in pixel spectra and used to examine impact of oil along the oiled shorelines. Results showed that vegetation stress was restricted to the tidal zone extending 14 m inland from the shoreline in September 2010. Four indexes of plant stress and three indexes of canopy water content all consistently showed that stress was highest in pixels next to the shoreline and decreased with increasing distance from the shoreline. Index values along the oiled shoreline were significantly lower than those along the oil-free shoreline. Regression of index values with respect to distance from oil showed that in 2011, index values were no longer correlated with proximity to oil suggesting that the marsh was on its way to recovery. Change detection between the two dates showed that areas denuded of vegetation after the oil impact experienced varying degrees of re-vegetation in the following year. This recovery was poorest in the first three pixels adjacent to the shoreline. This study illustrates the usefulness of high spatial resolution airborne imaging spectroscopy to map actual locations where oil from the spill reached the shore and then to assess its impacts on the plant community. We demonstrate that post-oiling trends in terms of plant health and mortality could be detected and monitored, including recovery of these saltmarsh meadows one year after the oil spill.

Assessing the Potential Impact of the 2015-2016 El Niño on the California Rim Fire Burn Scar Through Debris Flow Hazard Mapping

NASA Astrophysics Data System (ADS)

Larcom, S.; Grigsby, S.; Ustin, S.

2015-12-01

Wildfires are a perennial issue for California, and the current record-breaking drought is exacerbating the potential problems for the state. Fires leave behind burn scars characterized by diminished vegetative cover and abundant bare soil, and these areas are especially susceptible to storm events that pose an elevated risk of debris flows and sediment-rich sheet wash. This study focused on the 2013 Rim Fire that devastated significant portions of Stanislaus National Forest and Yosemite National Park, and utilized readily available NASA JPL SRTM elevation data and AVIRIS spectral imaging data to construct a debris flow hazard map that assesses mass wasting risk for the Rim Fire burn scar. This study consisted entirely of remotely sensed data, which was processed in software programs such as ENVI, GRASS GIS, ArcMap, and Google Earth. Parameters that were taken into consideration when constructing this map include hill slope (greater than 30 percent rise), burn severity (assessed by calculating NDVI), and erodibility of the soil (by comparing spectral reflectance of AVIRIS images with the reference spectra of illite). By calculating percent of total burn area, 6% was classified as low risk, 55% as medium risk, and 39% as high risk. In addition, this study assessed the importance of the 2015-2016 El Niño, which is projected to be one of the strongest on record, by studying historic rainfall records and storm events of past El Niño's. Hydrological and infrastructural problems that could be caused by short-term convective or long-term synoptic storms and subsequent debris flows were explored as well.

Detection of Salt Marsh Vegetation Stress and Recovery after the Deepwater Horizon Oil Spill in Barataria Bay, Gulf of Mexico Using AVIRIS Data

PubMed Central

Khanna, Shruti; Santos, Maria J.; Ustin, Susan L.; Koltunov, Alexander; Kokaly, Raymond F.; Roberts, Dar A.

2013-01-01

The British Petroleum Deepwater Horizon Oil Spill in the Gulf of Mexico was the biggest oil spill in US history. To assess the impact of the oil spill on the saltmarsh plant community, we examined Advanced Visible Infrared Imaging Spectrometer (AVIRIS) data flown over Barataria Bay, Louisiana in September 2010 and August 2011. Oil contamination was mapped using oil absorption features in pixel spectra and used to examine impact of oil along the oiled shorelines. Results showed that vegetation stress was restricted to the tidal zone extending 14 m inland from the shoreline in September 2010. Four indexes of plant stress and three indexes of canopy water content all consistently showed that stress was highest in pixels next to the shoreline and decreased with increasing distance from the shoreline. Index values along the oiled shoreline were significantly lower than those along the oil-free shoreline. Regression of index values with respect to distance from oil showed that in 2011, index values were no longer correlated with proximity to oil suggesting that the marsh was on its way to recovery. Change detection between the two dates showed that areas denuded of vegetation after the oil impact experienced varying degrees of re-vegetation in the following year. This recovery was poorest in the first three pixels adjacent to the shoreline. This study illustrates the usefulness of high spatial resolution airborne imaging spectroscopy to map actual locations where oil from the spill reached the shore and then to assess its impacts on the plant community. We demonstrate that post-oiling trends in terms of plant health and mortality could be detected and monitored, including recovery of these saltmarsh meadows one year after the oil spill. PMID:24223872

Compositional and textural information from the dual inversion of visible, near and thermal infrared remotely sensed data

NASA Technical Reports Server (NTRS)

Brackett, Robert A.; Arvidson, Raymond E.

1993-01-01

A technique is presented that allows extraction of compositional and textural information from visible, near and thermal infrared remotely sensed data. Using a library of both emissivity and reflectance spectra, endmember abundances and endmember thermal inertias are extracted from AVIRIS (Airborne Visible and Infrared Imaging Spectrometer) and TIMS (Thermal Infrared Mapping Spectrometer) data over Lunar Crater Volcanic Field, Nevada, using a dual inversion. The inversion technique is motivated by upcoming Mars Observer data and the need for separation of composition and texture parameters from sub pixel mixtures of bedrock and dust. The model employed offers the opportunity to extract compositional and textural information for a variety of endmembers within a given pixel. Geologic inferences concerning grain size, abundance, and source of endmembers can be made directly from the inverted data. These parameters are of direct relevance to Mars exploration, both for Mars Observer and for follow-on missions.

Tracking photosynthetic efficiency with narrow-band spectroradiometry

NASA Technical Reports Server (NTRS)

Gamon, John A.; Field, Christopher B.

1992-01-01

Narrow-waveband spectroradiometry presents the possibility of detecting subtle signals closely related to the current physiological state of vegetation. One such signal related to the epoxidation state of the xanthophyll cycle pigments, violaxanthin, antheraxanthin, and zeaxanthin is discussed. Recent advances in plant ecophysiology demonstrated a close relationship between these pigments and the regulatory state of photosystem 2 in photosynthesis. Our recent field studies of sunflower (Helianthus annuus) and oak (Quercus agrifolia) demonstrated that a 'xanthophyll signal' can be isolated from the diurnal reflectance spectra of intact canopies. Furthermore, the xanthophyll signal can be used to derive a 'physiological reflectance index' (PRI) that closely correlates with the actual photosynthetic efficiency (defined as the photosynthetic rate divided by the incident PAR) in closed canopies. If these signals were detectable in Airborne Visible/Infrared Imaging Spectrometers (AVIRIS) images, they could lead to improved remote estimates of photosynthetic fluxes.

Summaries of the Third Annual JPL Airborne Geoscience Workshop. Volume 1: AVIRIS Workshop

NASA Technical Reports Server (NTRS)

Green, Robert O. (Editor)

1992-01-01

This publication contains the preliminary agenda and summaries for the Third Annual JPL Airborne Geoscience Workshop, held at the Jet Propulsion Laboratory, Pasadena, California, on 1-5 June 1992. This main workshop is divided into three smaller workshops as follows: (1) the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) workshop, on June 1 and 2; (2) the Thermal Infrared Multispectral Scanner (TIMS) workshop, on June 3; and (3) the Airborne Synthetic Aperture Radar (AIRSAR) workshop, on June 4 and 5. The summaries are contained in Volumes 1, 2, and 3, respectively.

Measurements of canopy chemistry with 1992 AVIRIS data at Blackhawk Island and Harvard Forest

NASA Technical Reports Server (NTRS)

Martin, Mary E.; Aber, John D.

1993-01-01

The research described in this paper was designed to determine if high spectral resolution imaging spectrometer data can be used to measure the chemical composition of forest foliage, specifically nitrogen and lignin concentration. Information about the chemical composition of forest canopies can be used to determine nutrient cycling rates and carbon balances in forest ecosystems. This paper will describe the results relating data from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) to field measured canopy chemistry at Blackhawk Island, WI and Harvard Forest, MA.

Nutrient Stress Detection in Corn Using Neural Networks and AVIRIS Hyperspectral Imagery

NASA Technical Reports Server (NTRS)

Estep, Lee

2001-01-01

AVIRIS image cube data has been processed for the detection of nutrient stress in corn by both known, ratio-type algorithms and by trained neural networks. The USDA Shelton, NE, ARS Variable Rate Nitrogen Application (VRAT) experimental farm was the site used in the study. Upon application of ANOVA and Dunnett multiple comparsion tests on the outcome of both the neural network processing and the ratio-type algorithm results, it was found that the neural network methodology provides a better overall capability to separate nutrient stressed crops from in-field controls.

Low-Altitude AVIRIS Data for Mapping Land Cover in Yellowstone National Park: Use of Isodata Clustering Techniques

NASA Technical Reports Server (NTRS)

Spruce, Joseph P.

2001-01-01

Northeast Yellowstone National Park (YNP) has a diversity of forest, range, and wetland cover types. Several remote sensing studies have recently been done in this area, including the NASA Earth Observations Commercial Applications Program (EOCAP) hyperspectral project conducted by Yellowstone Ecosystems Studies (YES) on the use of hyperspectral imaging for assessing riparian and in-stream habitats. In 1999, YES and NASA's Commercial Remote Sensing Program Office began collaborative study of this area, assessing the potential of synergistic use of hyperspectral, synthetic aperture radar (SAR), and multiband thermal data for mapping forest, range, and wetland land cover. Since the beginning, a quality 'reference' land cover map has been desired as a tool for developing and validating other land cover maps produced during the project. This paper recounts an effort to produce such a reference land cover map using low-altitude Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data and unsupervised classification techniques. The main objective of this study is to assess ISODATA classification for mapping land cover in Northeast YNP using select bands of low-altitude AVIRIS data. A secondary, more long-term objective is to assess the potential for improving ISODATA-based classification of land cover through use of principal components analysis and minimum noise fraction (MNF) techniques. This paper will primarily report on work regarding the primary research objective. This study focuses on an AVIRIS cube acquired on July 23, 1999, by the confluence of Soda Butte Creek with the Lamar River. Range and wetland habitats dominate the image with forested habitats being a comparatively minor component of the scene. The scene generally tracks from southwest to northeast. Most of the scene is valley bottom with some lower side slopes occurring on the western portion. Elevations within the AVIRIS scene range from approximately 1998 to 2165 m above sea level, based on US Geological Survey (USGS) 30-m digital elevation model (DEM) data. Despain and the National Park Service (NPS) provide additional description of the study area.

Correction of thin cirrus effects in AVIRIS images using the sensitive 1.375-micron cirrus detecting channel

NASA Technical Reports Server (NTRS)

Gao, Bo-Cai; Kaufman, Yorman J.

1995-01-01

Using spectral imaging data acquired with the Airborne Visible Infrared Imaging Spectrometer (AVIRIS) from an ER-2 aircraft at 20 km altitude during various field programs, it was found that narrow channels near the center of the strong 1.38-micrometer water vapor band are very effective in detecting think cirrus clouds. Based on this observation from AVIRIS data, Gao and Kaufman proposed to put a channel centered at 1.375 micrometers with a width of 30 nm on the Moderate Resolution Imaging Spectrometer (MODIS) for remote sensing of cirrus clouds from space. The sensitivity of the 1.375-micrometer MODIS channel to detect thin cirrus clouds during the day time is expected to be one to two orders of magnitude better than the current infrared emission techniques. As a result, much larger fraction of the satellite data is expected to be identified as being covered by cirrus clouds, some of them so thin that their obscuration of the surface is very small. In order to make better studies of surface reflectance properties, thin cirrus effects must be removed from satellite images. Therefore, there is a need to study radiative properties of thin cirrus clouds, so that a strategy for correction or removal of the thin cirrus effects, similar to the correction of atmospheric aerosol effect, can be formed. In this extended abstract, we describe an empirical approach for removing/correcting thin cirrus effects in AVIRIS images using channels near 1.375 microns - one step beyond the detection of cirrus clouds using these channels.

Approaches to vegetation mapping and ecophysiological hypothesis testing using combined information from TIMS, AVIRIS, and AIRSAR

NASA Technical Reports Server (NTRS)

Oren, R.; Vane, G.; Zimmermann, R.; Carrere, V.; Realmuto, V.; Zebker, Howard A.; Schoeneberger, P.; Schoeneberger, M.

1991-01-01

The Tropical Rainforest Ecology Experiment (TREE) had two primary objectives: (1) to design a method for mapping vegetation in tropical regions using remote sensing and determine whether the result improves on available vegetation maps; and (2) to test a specific hypothesis on plant/water relations. Both objectives were thought achievable with the combined information from the Thermal Infrared Multispectral Scanner (TIMS), Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), and Airborne Synthetic Aperture Radar (AIRSAR). Implicitly, two additional objectives were: (1) to ascertain that the range within each variable potentially measurable with the three instruments is large enough in the site, relative to the sensitivity of the instruments, so that differences between ecological groups may be detectable; and (2) to determine the ability of the three systems to quantify different variables and sensitivities. We found that the ranges in values of foliar nitrogen concentration, water availability, stand structure and species composition, and plant/water relations were large, even within the upland broadleaf vegetation type. The range was larger when other vegetation types were considered. Unfortunately, cloud cover and navigation errors compromised the utility of the TIMS and AVIRIS data. Nevertheless, the AIRSAR data alone appear to have improved on the available vegetation map for the study area. An example from an area converted to a farm is given to demonstrate how the combined information from AIRSAR, TIMS, and AVIRIS can uniquely identify distinct classes of land use. The example alludes to the potential utility of the three instruments for identifying vegetation at an ecological scale finer than vegetation types.

Evaluation of the photochemical reflectance index in AVIRIS imagery

NASA Technical Reports Server (NTRS)

Gamon, John A.; Roberts, Dar A.; Green, Robert O.

1995-01-01

In this paper, we evaluate the potential for extracting the 'photochemical reflectance index' (PRI; previously called the 'physiological reflectance index') from AVIRIS data. This index, which is derived from narrow-band reflectance at 531 and 570 nm, has proven to be a useful indicator of photosynthetic function at the leaf and canopy scales. At the leaf level, PRI varies with photosynthetic capacity, radiation-use efficiency, and vegetation type (unpublished data). This finding is consistent with the hypothesis that vegetation types exhibiting chronically reduced photosynthesis during periods of stress (e.g. drought-tolerant evergreens) invest proportionally more in photoprotective processes than vegetation with high photosynthetic capacity (e.g. crops or deciduous perennials). Vertical transects in tropical and boreal forest canopies have indicated declines in PRI associated with downregulation of photosynthesis at the canopy tops under sunny, dry midday conditions (unpublished data). This reduced PRI in upper canopy levels provides a further basis for examining this signal with the 'view from above' afforded by aircraft overflights. Although many factors could confound interpretation of a subtle physiological signal at the landscape scale, we conducted a preliminary examination of PRI extracted from existing, AVIRIS imagery of Stanford University's Jasper Ridge Biological Preserve obtained on the June 2nd, 1992, overflight. The goal was to use the hyperspectral capabilities of AVIRIS to evaluate the potential of this index for obtaining useful physiological data at the landscape scale. The expectation based on leaf- and canopy-level studies was that regions containing vegetation of reduced photosynthetic capacity (e.g. chaparral or evergreen woodland) would exhibit lower PRI values than regions of high capacity (e.g. deciduous woodland).

Mineralogic variations in fluvial sediments contaminated by mine tailings as determined from AVIRIS data, Coeur D'Alene River Valley, Idaho

NASA Technical Reports Server (NTRS)

Farrand, W. H.; Harsanyi, Joseph C.

1995-01-01

The success of imaging spectrometry in mineralogic mapping of natural terrains indicates that the technology can also be used to assess the environmental impact of human activities in certain instances. Specifically, this paper describes an investigation into the use of data from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) for mapping the spread of, and assessing changes in, the mineralogic character of tailings from a major silver and base metal mining district. The area under investigation is the Coeur d'Alene River Valley in northern Idaho. Mining has been going on in and around the towns of Kellogg and Wallace, Idaho since the 1880's. In the Kellogg-Smelterville Flats area, west of Kellogg, mine tailings were piled alongside the South Fork of the Coeur d'Alene River. Until the construction of tailings ponds in 1968 much of these waste materials were washed directly into the South Fork. The Kellogg-Smelterville area was declared an Environmental Protection Agency (EPA) Superfund site in 1983 and remediation efforts are currently underway. Recent studies have demonstrated that sediments in the Coeur d'Alene River and in the northern part of Lake Coeur d'Alene, into which the river flows, are highly enriched in Ag, Cu, Pb, Zn, Cd, Hg, As, and Sb. These trace metals have become aggregated in iron oxide and oxyhydroxide minerals and/or mineraloids. Reflectance spectra of iron-rich tailing materials are shown. Also shown are spectra of hematite and goethite. The broad bandwidth and long band center (near 1 micron) of the Fe(3+) crystal-field band of the iron-rich sediment samples combined with the lack of features on the Fe(3+) -O(2-) charge transfer absorption edge indicates that the ferric oxide and/or oxyhydroxide in these sediments is poorly crystalline to amorphous in character. Similar features are seen in poorly crystalline basaltic weathering products (e.g., palagonites). The problem of mapping and analyzing the downriver occurrences of iron rich tailings in the Coeur d'Alene (CDA) River Valley using remotely sensed data is complicated by the full vegetation cover present in the area. Because exposures of rock and soil were sparse, the data processing techniques used in this study were sensitive to detecting materials at subpixel scales. The methods used included spectral mixture analysis and a constrained energy minimization technique.

Imager-to-Radiometer In-flight Cross Calibration: RSP Radiometric Comparison with Airborne and Satellite Sensors

NASA Technical Reports Server (NTRS)

McCorkel, Joel; Cairns, Brian; Wasilewski, Andrzej

2016-01-01

This work develops a method to compare the radiometric calibration between a radiometer and imagers hosted on aircraft and satellites. The radiometer is the airborne Research Scanning Polarimeter (RSP), which takes multi-angle, photo-polarimetric measurements in several spectral channels. The RSP measurements used in this work were coincident with measurements made by the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), which was on the same aircraft. These airborne measurements were also coincident with an overpass of the Landsat 8 Operational Land Imager (OLI). First we compare the RSP and OLI radiance measurements to AVIRIS since the spectral response of the multispectral instruments can be used to synthesize a spectrally equivalent signal from the imaging spectrometer data. We then explore a method that uses AVIRIS as a transfer between RSP and OLI to show that radiometric traceability of a satellite-based imager can be used to calibrate a radiometer despite differences in spectral channel sensitivities. This calibration transfer shows agreement within the uncertainty of both the various instruments for most spectral channels.

Evaluation of the airborne visible-infrared imaging spectrometer for mapping subtle lithological variation

NASA Technical Reports Server (NTRS)

Kruse, Fred A.

1990-01-01

The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), flown aboard the NASA ER-2 aircraft in 1987 and 1989, used four linear arrays and four individual spectrometers to collect data simultaneously from the 224 bands in a scanned 614 pixel-wide swath perpendicular to the aircraft direction. The research had two goals. One was to evaluate the AVIRIS data. The other was to look at the subtle lithological variation at the two test sites to develop a better understanding of the regional geology and surficial processes. The geometric characteristics of the data, adequacy of the spatial resolution, and adequacy of the spectral sampling interval are evaluated. Geologic differences at the test sites were mapped. They included lithological variation caused by primary sedimentary layering, facies variation, and weathering; and subtle mineralogical differences caused by hydrothermal alterations of igneous and sedimentary rocks. The investigation used laboratory, field, and aircraft spectral measurements; known properties of geological materials; digital image processing and spectrum processing techniques; and field geologic data to evaluate the selected characteristics of the AVIRIS data.

Detection of spectral line curvature in imaging spectrometer data

NASA Astrophysics Data System (ADS)

Neville, Robert A.; Sun, Lixin; Staenz, Karl

2003-09-01

A procedure has been developed to measure the band-centers and bandwidths for imaging spectrometers using data acquired by the sensor in flight. This is done for each across-track pixel, thus allowing the measurement of the instrument's slit curvature or spectral 'smile'. The procedure uses spectral features present in the at-sensor radiance which are common to all pixels in the scene. These are principally atmospheric absorption lines. The band-center and bandwidth determinations are made by correlating the sensor measured radiance with a modelled radiance, the latter calculated using MODTRAN 4.2. Measurements have been made for a number of instruments including Airborne Visible and Infra-Red Imaging Spectrometer (AVIRIS), SWIR Full Spectrum Imager (SFSI), and Hyperion. The measurements on AVIRIS data were performed as a test of the procedure; since AVIRIS is a whisk-broom scanner it is expected to be free of spectral smile. SFSI is an airborne pushbroom instrument with considerable spectral smile. Hyperion is a satellite pushbroom sensor with a relatively small degree of smile. Measurements of Hyperion were made using three different data sets to check for temporal variations.

SIMPL/AVIRIS-NG Greenland 2015: Flight Report

NASA Technical Reports Server (NTRS)

Brunt, Kelly M.; Neumann, Thomas A.; Markus, Thorsten

2015-01-01

In August 2015, NASA conducted a two-­aircraft, coordinated campaign based out of Thule Air Base, Greenland, in support of Ice, Cloud, and land Elevation Satellite-2 (ICESat-2) algorithm development. The survey targeted the Greenland Ice Sheet and sea ice in the Arctic Ocean during the summer melt season. The survey was conducted with a photon-counting laser altimeter in one aircraft and an imaging spectrometer in the second aircraft. Ultimately, the mission, SIMPL/AVIRIS-NG Greenland 2015, conducted nine coordinated science flights, for a total of 37 flight hours over the ice sheet and sea ice.

Summaries of the 4th Annual JPL Airborne Geoscience Workshop. Volume 1: AVIRIS Workshop

NASA Technical Reports Server (NTRS)

Green, Robert O. (Editor)

1993-01-01

This publication contains the summaries for the Fourth Annual JPL Airborne Geoscience Workshop, held in Washington, D. C. October 25-29, 1993 The main workshop is divided into three smaller workshops as follows: The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) workshop, October 25-26 (the summaries for this workshop appear in this volume, Volume 1); The Thermal Infrared Multispectral Scanner (TMIS) workshop, on October 27 (the summaries for this workshop appear in Volume 2); and The Airborne Synthetic Aperture Radar (AIRSAR) workshop, October 28-29 (the summaries for this workshop appear in Volume 3).

Comparison of ASTER- and AVIRIS-Derived Mineraland Vegetation Maps of the White Horse Replacement Alunite Deposit and Surrounding Area, Marysvale Volcanic Field, Utah

USGS Publications Warehouse

Rockwell, Barnaby W.

2009-01-01

This report presents and compares mineral and vegetation maps of parts of the Marysvale volcanic field in west-central Utah that were published in a recent paper describing the White Horse replacement alunite deposit. Detailed, field-verified maps of the deposit were produced from Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data acquired from a low-altitude Twin Otter turboprop airborne platform. Reconnaissance-level maps of surrounding areas including the central and northern Tushar Mountains, Pahvant Range, and portions of the Sevier Plateau to the east were produced from visible, near-infrared, and shortwave-infrared data acquired by the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) sensor carried aboard the Terra satellite platform. These maps are also compared to a previously published mineral map of the same area generated from AVIRIS data acquired from the high-altitude NASA ER-2 jet platform. All of the maps were generated by similar analysis methods, enabling the direct comparison of the spatial scale and mineral composition of surface geologic features that can be identified using the three types of remote sensing data. The high spatial (2-17 meter) and spectral (224 bands) resolution AVIRIS data can be used to generate detailed mineral and vegetation maps suitable for geologic and geoenvironmental studies of individual deposits, mines, and smelters. The lower spatial (15-30 meter) and spectral (9 bands) resolution ASTER data are better suited to less detailed mineralogical studies of lithology and alteration across entire hydrothermal systems and mining districts, including regional mineral resource and geoenvironmental assessments. The results presented here demonstrate that minerals and mineral mixtures can be directly identified using AVIRIS and ASTER data to elucidate spatial patterns of mineralogic zonation; AVIRIS data can enable the generation of maps with significantly greater detail and accuracy. The vegetation mapping results suggest that ASTER data may provide an efficient alternative to spectroscopic data for studies of burn severity after wildland fires. A new, semiautomated methodology for the analysis of ASTER data is presented that is currently being applied to ASTER data coverage of large areas for regional assessments of mineral-resource potential and mineral-environmental effects. All maps are presented in a variety of digital formats, including jpeg, pdf, and ERDAS Imagine (.img). The Imagine format files are georeferenced and suitable for viewing with other geospatial data in Imagine, ArcGIS, and ENVI. The mineral and vegetation maps are attributed so that the material identified for a pixel can be determined easily in ArcMap by using the Identify tool and in Imagine by using the Inquire Cursor tool.

A Multi-Scale Sampling Strategy for Detecting Physiologically Significant Signals in AVIRIS Imagery

NASA Technical Reports Server (NTRS)

Gamon, John A.; Lee, Lai-Fun; Qiu, Hong-Lie; Davis, Stephen; Roberts, Dar A.; Ustin, Susan L.

1998-01-01

Models of photosynthetic production at ecosystem and global scales require multiple input parameters specifying physical and physiological surface features. While certain physical parameters (e.g., absorbed photosynthetically active radiation) can be derived from current satellite sensors, other physiologically relevant measures (e.g., vegetation type, water status, carboxylation capacity, or photosynthetic light-use efficiency), are not generally directly available from current satellite sensors at the appropriate geographic scale. Consequently, many model parameters must be assumed or derived from independent sources, often at an inappropriate scale. An abundance of ecophysiological studies at the leaf and canopy scales suggests strong physiological control of vegetation-atmosphere CO2 and water vapor fluxes, particularly in evergreen vegetation subjected to diurnal or seasonal stresses. For example hot, dry conditions can lead to stomatal closure, and associated "downregulation" of photosynthetic biochemical processes, a phenomenon often manifested as a "midday photosynthetic depression". A recent study with the revised simple biosphere (SiB2) model demonstrated that photosynthetic downregulation can significantly impact global climate. However, at the global scale, the exact significance of downregulation remains unclear, largely because appropriate physiological measures are generally unavailable at this scale. Clearly, there is a need to develop reliable ways of extracting physiologically relevant information from remote sensing. Narrow-band spectrometers offer many opportunities for deriving physiological parameters needed for ecosystem and global scale photosynthetic models. Experimental studies on the ground at the leaf- to stand-scale have indicated that several narrow-band features can be used to detect plant physiological status. One physiological signal is caused by xanthophyll cycle pigment activity, and is often expressed as the Photochemical Reflectance Index (PRI). Because the xanthophyll cycle pigments are photoregulatory pigments closely linked to photosynthetic function, this index can be used to derive relative photosynthetic rates. An additional signal with physiological significance is the 970 nm water absorption band, which provides a measure of liquid water content. This feature has been quantified both using a simple 2-band ratio (900/970 nm, here referred to as the "Water Band Index" or WBI;), and using the "continuum removal" method. Current atmospheric correction methods for AVIRIS imagery also obtain quantitative expressions of surface liquid water absorption based on the 970 nm water band and may be comparable to ground-based estimates of water content using this feature. However, physiological interpretations of both the PRI and the WBI are best understood at the leaf and canopy scales, where complications of atmospheric interference and complex stand and landscape features can be minimized, and where experimental manipulations can be readily applied. Currently it is not known whether these physiological indices can be used to derive meaningful physiological information from AVIRIS imagery. In addition to the problem of atmospheric interference, another challenge is that any simple physiological index can be confounded by multiple factors unrelated to physiology, and this problem can become more severe at progressively larger spatial scales. For example, previous work has suggested that both the PRI and the WBI, are strongly correlated with other optical measures of canopy structure (e.g., the Normalized Difference Vegetation Index or green vegetation fraction), indicating a confounding effect of structure on physiological signals at the larger, landscape scale. Furthermore, the normal operating mode of most imaging spectrometers does not allow simultaneous, ground truthing at a level of detail needed for physiological sampling. Additionally, manipulative experiments of physiology are difficult to apply at a geographic scale suitable for comparison with remote imagery, which often works at spatial scales that are several orders of magnitude larger than those typically used for physiological studies. These limitations require the consideration of alternative approaches to validating physiological information derived from AVIRIS data. In this report, we present a multi-scale sampling approach to detecting physiologically significant signals in narrow-band spectra. This approach explores the multi-dimensional data space provided by narrow-band spectrometry, and combines AVIRIS imagery at a large scale, with ground spectral sampling at an intermediate scale, and detailed ecophysiological measurements at a fine scale, to examine seasonally and spatially changing relationships between multiple structural and physiological variables. Examples of this approach are provided by simultaneous sampling of the Normalized Difference Vegetation Index (NDVI), an index of fractional PAR interception and green vegetation cover, the Water Band Index (WBI, an index of liquid water absorption, and the Photochemical Reflectance Index (PRI, an index of xanthophyll cycle pigment activity and photosynthetic light-use efficiency. By directly linking changing optical properties sampled on the ground with measurable physiological states, we hope to develop a basis for interpreting similar signals in AVIRIS imagery.

Surface emissivity and temperature retrieval for a hyperspectral sensor

DOE Office of Scientific and Technical Information (OSTI.GOV)

Borel, C.C.

1998-12-01

With the growing use of hyper-spectral imagers, e.g., AVIRIS in the visible and short-wave infrared there is hope of using such instruments in the mid-wave and thermal IR (TIR) some day. The author believes that this will enable him to get around using the present temperature-emissivity separation algorithms using methods which take advantage of the many channels available in hyper-spectral imagers. A simple fact used in coming up with a novel algorithm is that a typical surface emissivity spectrum are rather smooth compared to spectral features introduced by the atmosphere. Thus, a iterative solution technique can be devised which retrievesmore » emissivity spectra based on spectral smoothness. To make the emissivities realistic, atmospheric parameters are varied using approximations, look-up tables derived from a radiative transfer code and spectral libraries. One such iterative algorithm solves the radiative transfer equation for the radiance at the sensor for the unknown emissivity and uses the blackbody temperature computed in an atmospheric window to get a guess for the unknown surface temperature. By varying the surface temperature over a small range a series of emissivity spectra are calculated. The one with the smoothest characteristic is chosen. The algorithm was tested on synthetic data using MODTRAN and the Salisbury emissivity database.« less

A method for quantitative mapping of thick oil spills using imaging spectroscopy

USGS Publications Warehouse

Clark, Roger N.; Swayze, Gregg A.; Leifer, Ira; Livo, K. Eric; Kokaly, Raymond F.; Hoefen, Todd; Lundeen, Sarah; Eastwood, Michael; Green, Robert O.; Pearson, Neil; Sarture, Charles; McCubbin, Ian; Roberts, Dar; Bradley, Eliza; Steele, Denis; Ryan, Thomas; Dominguez, Roseanne; ,

2010-01-01

In response to the Deepwater Horizon oil spill in the Gulf of Mexico, a method of near-infrared imaging spectroscopic analysis was developed to map the locations of thick oil floating on water. Specifically, this method can be used to derive, in each image pixel, the oil-to-water ratio in oil emulsions, the sub-pixel areal fraction, and its thicknesses and volume within the limits of light penetration into the oil (up to a few millimeters). The method uses the shape of near-infrared (NIR) absorption features and the variations in the spectral continuum due to organic compounds found in oil to identify different oil chemistries, including its weathering state and thickness. The method is insensitive to complicating conditions such as moderate aerosol scattering and reflectance level changes from other conditions, including moderate sun glint. Data for this analysis were collected by the NASA Airborne Visual Infrared Imaging Spectrometer (AVIRIS) instrument, which was flown over the oil spill on May 17, 2010. Because of the large extent of the spill, AVIRIS flight lines could cover only a portion of the spill on this relatively calm, nearly cloud-free day. Derived lower limits for oil volumes within the top few millimeters of the ocean surface directly probed with the near-infrared light detected in the AVIRIS scenes were 19,000 (conservative assumptions) to 34,000 (aggressive assumptions) barrels of oil. AVIRIS covered about 30 percent of the core spill area, which consisted of emulsion plumes and oil sheens. Areas of oil sheen but lacking oil emulsion plumes outside of the core spill were not evaluated for oil volume in this study. If the core spill areas not covered by flight lines contained similar amounts of oil and oil-water emulsions, then extrapolation to the entire core spill area defined by a MODIS (Terra) image collected on the same day indicates a minimum of 66,000 to 120,000 barrels of oil was floating on the surface. These estimates are preliminary and subject to revision pending further analysis. Based on laboratory measurements, near-infrared (NIR) photons penetrate only a few millimeters into oil-water emulsions. As such, the oil volumes derived with this method are lower limits. Further, the detection is only of thick surface oil and does not include sheens, underwater oil, or oil that had already washed onto beaches and wetlands, oil that had been burned or evaporated as of May 17. Because NIR light penetration within emulsions is limited, and having made field observations that oil emulsions sometimes exceeded 20 millimeters in thickness, we estimate that the volume of oil, including oil thicker than can be probed in the AVIRIS imagery, is possibly as high as 150,000 barrels in the AVIRIS scenes. When this value is projected to the entire spill, it gives a volume of about 500,000 barrels for thick oil remaining on the sea surface as of May 17. AVIRIS data cannot be used to confirm this higher volume, and additional field work including more in-situ measurements of oil thickness would be required to confirm this higher oil volume. Both the directly detected minimum range of oil volume, and the higher possible volume projection for oil thicker than can be probed with NIR spectroscopy imply a significantly higher total volume of oil relative to that implied by the early NOAA (National Oceanic and Atmospheric Administration) estimate of 5,000 barrels per day reported on their Web site.

Imaging spectrometer measurement of water vapor in the 400 to 2500 nm spectral region

NASA Technical Reports Server (NTRS)

Green, Robert O.; Roberts, Dar A.; Conel, James E.; Dozier, Jeff

1995-01-01

The Airborne Visible-Infrared Imaging Spectrometer (AVIRIS) measures the total upwelling spectral radiance from 400 to 2500 nm sampled at 10 nm intervals. The instrument acquires spectral data at an altitude of 20 km above sea level, as images of 11 by up to 100 km at 17x17 meter spatial sampling. We have developed a nonlinear spectral fitting algorithm coupled with a radiative transfer code to derive the total path water vapor from the spectrum, measured for each spatial element in an AVIRIS image. The algorithm compensates for variation in the surface spectral reflectance and atmospheric aerosols. It uses water vapor absorption bands centered at 940 nm, 1040 nm, and 1380 nm. We analyze data sets with water vapor abundances ranging from 1 to 40 perceptible millimeters. In one data set, the total path water vapor varies from 7 to 21 mm over a distance of less than 10 km. We have analyzed a time series of five images acquired at 12 minute intervals; these show spatially heterogeneous changes of advocated water vapor of 25 percent over 1 hour. The algorithm determines water vapor for images with a range of ground covers, including bare rock and soil, sparse to dense vegetation, snow and ice, open water, and clouds. The precision of the water vapor determination approaches one percent. However, the precision is sensitive to the absolute abundance and the absorption strength of the atmospheric water vapor band analyzed. We have evaluated the accuracy of the algorithm by comparing several surface-based determinations of water vapor at the time of the AVIRIS data acquisition. The agreement between the AVIRIS measured water vapor and the in situ surface radiometer and surface interferometer measured water vapor is 5 to 10 percent.

Field observations using an AOTF polarimetric imaging spectrometer

NASA Technical Reports Server (NTRS)

Cheng, Li-Jen; Hamilton, Mike; Mahoney, Colin; Reyes, George

1993-01-01

This paper reports preliminary results of recent field observations using a prototype acousto-optic tunable filter (AOTF) polarimetric imaging spectrometer. The data illustrate application potentials for geoscience. The operation principle of this instrument is different from that of current airborne multispectral imaging instruments, such as AVIRIS. The AOTF instrument takes two orthogonally polarized images at a desired wavelength at one time, whereas AVIRIS takes a spectrum over a predetermined wavelength range at one pixel at a time and the image is constructed later. AVIRIS does not have any polarization measuring capability. The AOTF instrument could be a complement tool to AVIRIS. Polarization measurement is a desired capability for many applications in remote sensing. It is well know that natural light is often polarized due to various scattering phenomena in the atmosphere. Also, scattered light from canopies is reported to have a polarized component. To characterize objects of interest correctly requires a remote sensing imaging spectrometer capable of measuring object signal and background radiation in both intensity and polarization so that the characteristics of the object can be determined. The AORF instrument has the capability to do so. The AOTF instrument has other unique properties. For example, it can provide spectral images immediately after the observation. The instrument can also allow observations to be tailored in real time to perform the desired experiments and to collect only required data. Consequently, the performance in each mission can be increased with minimal resources. The prototype instrument was completed in the beginning of this year. A number of outdoor field experiments were performed with the objective to evaluate the capability of this new technology for remote sensing applications and to determine issues for further improvements.

Environmental studies of the World Trade Center area after the September 11, 2001 attack

USGS Publications Warehouse

Clark, Roger N.; Green, Robert O.; Swayze, Gregg A.; Meeker, Greg; Sutley, Steve; Hoefen, Todd M.; Livo, K. Eric; Plumlee, Geoff; Pavri, Betina; Sarture, Chuck; Wilson, Steve; Hageman, Phil; Lamothe, Paul; Vance, J. Sam; Boardman, Joe; Brownfield, Isabelle; Gent, Carol; Morath, Laurie C.; Taggart, Joseph; Theodorakos, Peter M.; Adams, Monique

2001-01-01

This web site describes the results of an interdisciplinary environmental characterization of the World Trade Center (WTC) area after September 11, 2001.Information presented in this site was first made available to the World Trade Center emergency response teams on September 18, 2001 (Thermal hot spot information), and September 27, 2001 (maps and compositional results).The Airborne Visible / Infrared Imaging Spectrometer (AVIRIS), a hyperspectral remote sensing instrument, was flown by JPL/NASA over the World Trade Center (WTC) area on September 16, 18, 22, and 23, 2001 ( Link to the AVIRIS JPL data facility). A 2-person USGS crew collected samples of dusts and airfall debris from more than 35 localities within a 1-km radius of the World trade Center site on the evenings of September 17 and 18, 2001. Two samples were collected of indoor locations that were presumably not affected by rainfall (there was a rainstorm on September 14). Two samples of material coating a steel beam in the WTC debris were also collected. The USGS ground crew also carried out on-the-ground reflectance spectroscopy measurements during daylight hours to field calibrate AVIRIS remote sensing data. Radiance calibration and rectification of the AVIRIS data were done at JPL/NASA. Surface reflectance calibration, spectral mapping, and interpretation were done at the USGS Imaging Spectroscopy Lab in Denver. The dust/debris and beam-insulation samples were analyzed for a variety of mineralogical and chemical parameters using Reflectance Spectroscopy (RS), Scanning Electron Microscopy (SEM), X-Ray Diffraction (XRD), chemical analysis, and chemical leach test techniques in U.S. Geological Survey laboratories in Denver, Colorado.

Evaluation and application of new AVIRIS data for the study of coral reefs in Hawaiian Islands

NASA Astrophysics Data System (ADS)

Wei, J.; Lee, Z.

2017-12-01

During the HyspIRI Hawaii campaign in early 2017, we collected hyperspectral remote sensing reflectance over coral reef environments in Kaneohe Bay in Oahu and the coastal waters of Maui Island. Based on in-situ measurements, we evaluated the data quality of reflectance measurements by the Airborne Visible-Infrared Imaging Spectrometer (AVIRIS). Further, these data were used to refine the remote sensing algorithms for identification of live corals, water bathymetry, and water clarity for the entire flight lines. Our results suggested great improvement in our understanding and capabilities of using HyspIRI-like data to observe and monitor coral reef environments.

Summaries of the Fifth Annual JPL Airborne Earth Science Workshop. Volume 1: AVIRIS Workshop

NASA Technical Reports Server (NTRS)

Green, Robert O. (Editor)

1995-01-01

This publication is the first of three containing summaries for the Fifth Annual JPL Airborne Earth Science Workshop, held in Pasadena, California, on January 23-26, 1995. The main workshop is divided into three smaller workshops as follows: (1) The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) workshop, on January 23-24. The summaries for this workshop appear in this volume; (2) The Airborne Synthetic Aperture Radar (AIRSAR) workshop, on January 25-26. The summaries for this workshop appear in Volume 3; and (3) The Thermal Infrared Multispectral Scanner (TIMS) workshop, on January 26. The summaries for this workshop appear in Volume 2.

Understanding Variability in the AVIRIS-Derived Parameters from Vegetation Cover

NASA Technical Reports Server (NTRS)

Goetz, Alexander F. H.

2000-01-01

This project was carried out in two phases, the first was an investigation of the possible sources of variability in the canopy leaf chemistry parameters derived from AVERJS data on a year-to-year basis, and the second was a follow-on effort to improve the atmospheric correction program ATREM as well as to provide support to the community on the use of ATREM. This final report embodies a general review of the results obtained over the life of the contract as well as detailed interim reports and copies of the six papers published in AVIRIS Workshop Proceedings over the last 3 years.

Primary studies of trace quantities of green vegetation in Mono Lake area using 1990 AVIRIS data

NASA Technical Reports Server (NTRS)

Chen, Zhi-Kang; Elvidge, Chris D.; Groeneveld, David P.

1992-01-01

Our primary results in Jasper Ridge Biological Preserve indicate that high spectral resolution Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data may provide a substantial advantage in vegetation, based on the chlorophyll red edge feature from 700-780 nm. The chlorophyll red edge was detected for green vegetation cover as low as 4.8 percent. The objective of our studies in Mono Lake area is to continue the experiments performed in Jasper Ridge and to examine the persistence of red edge feature of trace quantities of green vegetation for different plant communities with non-uniform soil backgrounds.

Applying Tafkaa For Atmospheric Correction of Aviris Over Coral Ecosystems In The Hawaiian Islands

NASA Technical Reports Server (NTRS)

Goodman, James A.; Montes, Marcos J.; Ustin, Susan L.

2004-01-01

Growing concern over the health of coastal ecosystems, particularly coral reefs, has produced increased interest in remote sensing as a tool for the management and monitoring of these valuable natural resources. Hyperspectral capabilities show promising results in this regard, but as yet remain somewhat hindered by the technical and physical issues concerning the intervening water layer. One such issue is the ability to atmospherically correct images over shallow aquatic areas, where complications arise due to varying effects from specular reflection, wind blown surface waves, and reflectance from the benthic substrate. Tafkaa, an atmospheric correction algorithm under development at the U.S. Naval Research Laboratory, addresses these variables and provides a viable approach to the atmospheric correction issue. Using imagery from the Advanced Visible InfraRed Imaging Spectrometer (AVIRIS) over two shallow coral ecosystems in the Hawai ian Islands, French Frigate Shoals and Kane ohe Bay, we first demonstrate how land-based atmospheric corrections can be limited in such an environment. We then discuss the input requirements and underlying algorithm concepts of Tafkaa and conclude with examples illustrating the improved performance of Tafkaa using the same AVIRIS images.

Overview of the Joint NASA ISRO Imaging Spectroscopy Science Campaign in India

NASA Astrophysics Data System (ADS)

Green, R. O.; Bhattacharya, B. K.; Eastwood, M. L.; Saxena, M.; Thompson, D. R.; Sadasivarao, B.

2016-12-01

In the period from December 2015 to March 2016 the Airborne Visible-Infrared Imaging Spectrometer Next Generation (AVIRIS-NG) was deployed to India for a joint NASA ISRO science campaign. This campaign was conceived to provide first of their kind high fidelity imaging spectroscopy measurements of a diverse set of Asian environments for science and applications research. During this campaign measurements were acquired for 57 high priority sites that have objectives spanning: snow/ice of the Himalaya; coastal habitats and water quality; mangrove forests; soils; dry and humid forests; hydrocarbon alteration; mineralogy; agriculture; urban materials; atmospheric properties; and calibration/validation. Measurements from the campaign have been processed to at-instrument spectral radiance and atmospherically corrected surface reflectance. New AVIRIS-NG algorithms for retrieval of vegetation canopy water and for estimation of the fractions of photosynthetic, non-photosynthetic vegetation have been tested and evaluated on these measurements. An inflight calibration validation experiment was performed on the 11thof December 2015 in Hyderabad to assess the spectral and radiometric calibration of AVIRIS-NG in the flight environment. We present an overview of the campaign, calibration and validation results, and initial science analysis of a subset of these unique and diverse data sets.

Parallel design of JPEG-LS encoder on graphics processing units

NASA Astrophysics Data System (ADS)

Duan, Hao; Fang, Yong; Huang, Bormin

2012-01-01

With recent technical advances in graphic processing units (GPUs), GPUs have outperformed CPUs in terms of compute capability and memory bandwidth. Many successful GPU applications to high performance computing have been reported. JPEG-LS is an ISO/IEC standard for lossless image compression which utilizes adaptive context modeling and run-length coding to improve compression ratio. However, adaptive context modeling causes data dependency among adjacent pixels and the run-length coding has to be performed in a sequential way. Hence, using JPEG-LS to compress large-volume hyperspectral image data is quite time-consuming. We implement an efficient parallel JPEG-LS encoder for lossless hyperspectral compression on a NVIDIA GPU using the computer unified device architecture (CUDA) programming technology. We use the block parallel strategy, as well as such CUDA techniques as coalesced global memory access, parallel prefix sum, and asynchronous data transfer. We also show the relation between GPU speedup and AVIRIS block size, as well as the relation between compression ratio and AVIRIS block size. When AVIRIS images are divided into blocks, each with 64×64 pixels, we gain the best GPU performance with 26.3x speedup over its original CPU code.

Coral Reef Remote Sensing Using Simulated VIIRS and LDCM Imagery

NASA Technical Reports Server (NTRS)

Estep, Leland; Spruce, Joseph P.; Blonski, Slawomir; Moore, Roxzana

2008-01-01

The Rapid Prototyping Capability (RPC) node at NASA Stennis Space Center, MS, was used to simulate NASA next-generation sensor imagery over well-known coral reef areas: Looe Key, FL, and Kaneohe Bay, HI. The objective was to assess the degree to which next-generation sensor systems-the Visible/Infrared Imager/Radiometer Suite (VIIRS) and the Landsat Data Continuity Mission (LDCM)- might provide key input to the National Oceanographic and Atmospheric Administration (NOAA) Integrated Coral Observing Network (ICON)/Coral Reef Early Warning System (CREWS) Decision Support Tool (DST). The DST data layers produced from the simulated imagery concerned water quality and benthic classification map layers. The water optical parameters of interest were chlorophyll (Chl) and the absorption coefficient (a). The input imagery used by the RPC for simulation included spaceborne (Hyperion) and airborne (AVIRIS) hyperspectral data. Specific field data to complement and aid in validation of the overflight data was used when available. The results of the experiment show that the next-generation sensor systems are capable of providing valuable data layer resources to NOAA s ICON/CREWS DST.

Coral Reef Remote Sensing using Simulated VIIRS and LDCM Imagery

NASA Technical Reports Server (NTRS)

Estep, Leland; Spruce, Joseph P.

2007-01-01

The Rapid Prototyping Capability (RPC) node at NASA Stennis Space Center, MS, was used to simulate NASA next-generation sensor imagery over well-known coral reef areas: Looe Key, FL, and Kaneohe Bay, HI. The objective was to assess the degree to which next-generation sensor systems the Visible/Infrared Imager/Radiometer Suite (VIIRS) and the Landsat Data Continuity Mission (LDCM) might provide key input to the National Oceanographic and Atmospheric Administration (NOAA) Integrated Coral Observing Network (ICON)/Coral Reef Early Warning System (CREWS) Decision Support Tool (DST). The DST data layers produced from the simulated imagery concerned water quality and benthic classification map layers. The water optical parameters of interest were chlorophyll (Chl) and the absorption coefficient (a). The input imagery used by the RPC for simulation included spaceborne (Hyperion) and airborne (AVIRIS) hyperspectral data. Specific field data to complement and aid in validation of the overflight data was used when available. The results of the experiment show that the next-generation sensor systems are capable of providing valuable data layer resources to NOAA's ICON/CREWS DST.

Analysis of hyper-spectral AVIRIS image data over a mixed-conifer forest in Maine

NASA Technical Reports Server (NTRS)

Lawrence, William T.; Shimabukuro, Yosio E.; Gao, Bo-Cai

1993-01-01

An introduction to some of the potential uses of hyperspectral data for ecosystem analysis is presented. The examples given are derived from a digital dataset acquired over a sub-boreal forest in central Maine in 1990 by the NASA-JPL Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) instrument gathers data from 400 to 2500 nm in 224 channels at bandwidths of approximately 10 nm. As a preview to the uses of the hyperspectral data, several products from this dataset were extracted. They range from the traditional false color composite made from simulated Thematic Mapper bands and the well known normalized difference vegetation index to much more exotic products such as fractions of vegetation, soil and shade based on linear spectral mixing models and estimates of the leaf water content at the landscape level derived using spectrum-matching techniques. Our research and that of many others indicates that the hyperspectral datasets carry much important information which is only beginning to be understood. This analysis gives an initial indication of the utility of hyperspectral data. Much work still remains to be done in algorithm development and in understanding the physics behind the complex information signal carried in the hyperspectral datasets. This work must be carried out to provide the fullest science support for high spectral resolution data to be acquired by many of the instruments to be launched as part of the Earth Observing System program in the mid-1990's.

Accuracy assessment of a net radiation and temperature index snowmelt model using ground observations of snow water equivalent in an alpine basin

NASA Astrophysics Data System (ADS)

Molotch, N. P.; Painter, T. H.; Bales, R. C.; Dozier, J.

2003-04-01

In this study, an accumulated net radiation / accumulated degree-day index snowmelt model was coupled with remotely sensed snow covered area (SCA) data to simulate snow cover depletion and reconstruct maximum snow water equivalent (SWE) in the 19.1-km2 Tokopah Basin of the Sierra Nevada, California. Simple net radiation snowmelt models are attractive for operational snowmelt runoff forecasts as they are computationally inexpensive and have low input requirements relative to physically based energy balance models. The objective of this research was to assess the accuracy of a simple net radiation snowmelt model in a topographically heterogeneous alpine environment. Previous applications of net radiation / temperature index snowmelt models have not been evaluated in alpine terrain with intensive field observations of SWE. Solar radiation data from two meteorological stations were distributed using the topographic radiation model TOPORAD. Relative humidity and temperature data were distributed based on the lapse rate calculated between three meteorological stations within the basin. Fractional SCA data from the Landsat Enhanced Thematic Mapper (5 acquisitions) and the Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) (2 acquisitions) were used to derive daily SCA using a linear regression between acquisition dates. Grain size data from AVIRIS (4 acquisitions) were used to infer snow surface albedo and interpolated linearly with time to derive daily albedo values. Modeled daily snowmelt rates for each 30-m pixel were scaled by the SCA and integrated over the snowmelt season to obtain estimates of maximum SWE accumulation. Snow surveys consisting of an average of 335 depth measurements and 53 density measurements during April, May and June, 1997 were interpolated using a regression tree / co-krig model, with independent variables of average incoming solar radiation, elevation, slope and maximum upwind slope. The basin was clustered into 7 elevation / average-solar-radiation zones for SWE accuracy assessment. Model simulations did a poor job at estimating the spatial distribution of SWE. Basin clusters where the solar radiative flux dominated the melt flux were simulated more accurately than those dominated by the turbulent fluxes or the longwave radiative flux.

Hyperspectral image classification by a variable interval spectral average and spectral curve matching combined algorithm

NASA Astrophysics Data System (ADS)

Senthil Kumar, A.; Keerthi, V.; Manjunath, A. S.; Werff, Harald van der; Meer, Freek van der

2010-08-01

Classification of hyperspectral images has been receiving considerable attention with many new applications reported from commercial and military sectors. Hyperspectral images are composed of a large number of spectral channels, and have the potential to deliver a great deal of information about a remotely sensed scene. However, in addition to high dimensionality, hyperspectral image classification is compounded with a coarse ground pixel size of the sensor for want of adequate sensor signal to noise ratio within a fine spectral passband. This makes multiple ground features jointly occupying a single pixel. Spectral mixture analysis typically begins with pixel classification with spectral matching techniques, followed by the use of spectral unmixing algorithms for estimating endmembers abundance values in the pixel. The spectral matching techniques are analogous to supervised pattern recognition approaches, and try to estimate some similarity between spectral signatures of the pixel and reference target. In this paper, we propose a spectral matching approach by combining two schemes—variable interval spectral average (VISA) method and spectral curve matching (SCM) method. The VISA method helps to detect transient spectral features at different scales of spectral windows, while the SCM method finds a match between these features of the pixel and one of library spectra by least square fitting. Here we also compare the performance of the combined algorithm with other spectral matching techniques using a simulated and the AVIRIS hyperspectral data sets. Our results indicate that the proposed combination technique exhibits a stronger performance over the other methods in the classification of both the pure and mixed class pixels simultaneously.

Informed Source Separation of Atmospheric and Surface Signal Contributions in Shortwave Hyperspectral Imagery using Non-negative Matrix Factorization

NASA Astrophysics Data System (ADS)

Wright, L.; Coddington, O.; Pilewskie, P.

2015-12-01

Current challenges in Earth remote sensing require improved instrument spectral resolution, spectral coverage, and radiometric accuracy. Hyperspectral instruments, deployed on both aircraft and spacecraft, are a growing class of Earth observing sensors designed to meet these challenges. They collect large amounts of spectral data, allowing thorough characterization of both atmospheric and surface properties. The higher accuracy and increased spectral and spatial resolutions of new imagers require new numerical approaches for processing imagery and separating surface and atmospheric signals. One potential approach is source separation, which allows us to determine the underlying physical causes of observed changes. Improved signal separation will allow hyperspectral instruments to better address key science questions relevant to climate change, including land-use changes, trends in clouds and atmospheric water vapor, and aerosol characteristics. In this work, we investigate a Non-negative Matrix Factorization (NMF) method for the separation of atmospheric and land surface signal sources. NMF offers marked benefits over other commonly employed techniques, including non-negativity, which avoids physically impossible results, and adaptability, which allows the method to be tailored to hyperspectral source separation. We adapt our NMF algorithm to distinguish between contributions from different physically distinct sources by introducing constraints on spectral and spatial variability and by using library spectra to inform separation. We evaluate our NMF algorithm with simulated hyperspectral images as well as hyperspectral imagery from several instruments including, the NASA Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), NASA Hyperspectral Imager for the Coastal Ocean (HICO) and National Ecological Observatory Network (NEON) Imaging Spectrometer.

Improved Atmospheric Correction Over the Indian Subcontinent Using Fast Radiative Transfer and Optimal Estimation

NASA Astrophysics Data System (ADS)

Natraj, V.; Thompson, D. R.; Mathur, A. K.; Babu, K. N.; Kindel, B. C.; Massie, S. T.; Green, R. O.; Bhattacharya, B. K.

2017-12-01

Remote Visible / ShortWave InfraRed (VSWIR) spectroscopy, typified by the Next-Generation Airborne Visible/Infrared Imaging Spectrometer (AVIRIS-NG), is a powerful tool to map the composition, health, and biodiversity of Earth's terrestrial and aquatic ecosystems. These studies must first estimate surface reflectance, removing the atmospheric effects of absorption and scattering by water vapor and aerosols. Since atmospheric state varies spatiotemporally, and is insufficiently constrained by climatological models, it is important to estimate it directly from the VSWIR data. However, water vapor and aerosol estimation is a significant ongoing challenge for existing atmospheric correction models. Conventional VSWIR atmospheric correction methods evolved from multi-band approaches and do not fully utilize the rich spectroscopic data available. We use spectrally resolved (line-by-line) radiative transfer calculations, coupled with optimal estimation theory, to demonstrate improved accuracy of surface retrievals. These spectroscopic techniques are already pervasive in atmospheric remote sounding disciplines but have not yet been applied to imaging spectroscopy. Our analysis employs a variety of scenes from the recent AVIRIS-NG India campaign, which spans various climes, elevation changes, a wide range of biomes and diverse aerosol scenarios. A key aspect of our approach is joint estimation of surface and aerosol parameters, which allows assessment of aerosol distortion effects using spectral shapes across the entire measured interval from 380-2500 nm. We expect that this method would outperform band ratio approaches, and enable evaluation of subtle aerosol parameters where in situ reference data is not available, or for extreme aerosol loadings, as is observed in the India scenarios. The results are validated using existing in-situ reference spectra, reflectance measurements from assigned partners in India, and objective spectral quality metrics for scenes without any ground reference data. We also quantify the true information content of VSWIR spectroscopy for improving retrieval efficiency. We anticipate that our work will significantly improve the state of the art for VSWIR atmospheric correction, reducing regional biases in global ecosystem studies. 2017. All rights reserved.

Evaluating Vegetation Type Effects on Land Surface Temperature at the City Scale

NASA Astrophysics Data System (ADS)

Wetherley, E. B.; McFadden, J. P.; Roberts, D. A.

2017-12-01

Understanding the effects of different plant functional types and urban materials on surface temperatures has significant consequences for climate modeling, water management, and human health in cities. To date, doing so at the urban scale has been complicated by small-scale surface heterogeneity and limited data. In this study we examined gradients of land surface temperature (LST) across sub-pixel mixtures of different vegetation types and urban materials across the entire Los Angeles, CA, metropolitan area (4,283 km2). We used AVIRIS airborne hyperspectral imagery (36 m resolution, 224 bands, 0.35 - 2.5 μm) to estimate sub-pixel fractions of impervious, pervious, tree, and turfgrass surfaces, validating them with simulated mixtures constructed from image spectra. We then used simultaneously imaged LST retrievals collected at multiple times of day to examine how temperature changed along gradients of the sub-pixel mixtures. Diurnal in situ LST measurements were used to confirm image values. Sub-pixel fractions were well correlated with simulated validation data for turfgrass (r2 = 0.71), tree (r2 = 0.77), impervious (r2 = 0.77), and pervious (r2 = 0.83) surfaces. The LST of pure pixels showed the effects of both the diurnal cycle and the surface type, with vegetated classes having a smaller diurnal temperature range of 11.6°C whereas non-vegetated classes had a diurnal range of 16.2°C (similar to in situ measurements collected simultaneously with the imagery). Observed LST across fractional gradients of turf/impervious and tree/impervious sub-pixel mixtures decreased linearly with increasing vegetation fraction. The slopes of decreasing LST were significantly different between tree and turf mixtures, with steeper slopes observed for turf (p < 0.05). These results suggest that different physiological characteristics and different access to irrigation water of urban trees and turfgrass results in significantly different LST effects, which can be detected at large scales in fractional mixture analysis.

Low Altitude AVIRIS Data for Mapping Land Cover in Yellowstone National Park: Use of Isodata Clustering Techniques

NASA Technical Reports Server (NTRS)

Spruce, Joe

2001-01-01

Yellowstone National Park (YNP) contains a diversity of land cover. YNP managers need site-specific land cover maps, which may be produced more effectively using high-resolution hyperspectral imagery. ISODATA clustering techniques have aided operational multispectral image classification and may benefit certain hyperspectral data applications if optimally applied. In response, a study was performed for an area in northeast YNP using 11 select bands of low-altitude AVIRIS data calibrated to ground reflectance. These data were subjected to ISODATA clustering and Maximum Likelihood Classification techniques to produce a moderately detailed land cover map. The latter has good apparent overall agreement with field surveys and aerial photo interpretation.

Remote sensing of smoke, clouds, and fire using AVIRIS data

NASA Technical Reports Server (NTRS)

Gao, Bo-Cai; Kaufman, Yorman J.; Green, Robert O.

1993-01-01

Clouds remain the greatest element of uncertainty in predicting global climate change. During deforestation and biomass burning processes, a variety of atmospheric gases, including CO2 and SO2, and smoke particles are released into the atmosphere. The smoke particles can have important effects on the formation of clouds because of the increased concentration of cloud condensation nuclei. They can also affect cloud albedo through changes in cloud microphysical properties. Recently, great interest has arisen in understanding the interaction between smoke particles and clouds. We describe our studies of smoke, clouds, and fire using the high spatial and spectral resolution data acquired with the NASA/JPL Airborne Visible/Infrared Imaging Spectrometer (AVIRIS).

AVIRIS scan drive design and performance

NASA Technical Reports Server (NTRS)

Miller, D. C.

1987-01-01

The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) images the ground with an instantaneous field of view (IFOV) of 1 mrad. The IFOV is scanned 30 deg from left to right to provide the cross-track dimension of the image, while the aircraft's motion provides the along-track dimension. The scanning frequency is 12 Hz, with a scan efficiency of 70 percent. The scan mirror has an effective diameter of 5.7 in, and its positional accuracy is a small fraction of a milliradian of the nominal position-time profile. Described are the design and performance of the scan drive mechanism. Tradeoffs among various approaches are discussed, and the reasons given for the selection of the cam drive.

Mapping Pollution Plumes in Areas Impacted by Hurricane Katrina With Imaging Spectroscopy

NASA Astrophysics Data System (ADS)

Swayze, G. A.; Furlong, E. T.; Livo, K. E.

2007-12-01

New Orleans endured flooding on a massive scale subsequent to Hurricane Katrina in August of 2005. Contaminant plumes were noticeable in satellite images of the city in the days following flooding. Many of these plumes were caused by oil, gasoline, and diesel that leaked from inundated vehicles, gas stations, and refineries. News reports also suggested that the flood waters were contaminated with sewage from breached pipes. Effluent plumes such as these pose a potential health hazard to humans and wildlife in the aftermath of hurricanes and potentially from other catastrophic events (e.g., earthquakes, shipping accidents, chemical spills, and terrorist attacks). While the extent of effluent plumes can be gauged with synthetic aperture radar and broad- band visible-infrared images (Rykhus, 2005) (e.g., Radarsat and Landsat ETM+) the composition of the plumes could not be determined. These instruments lack the spectral resolution necessary to do chemical identification. Imaging spectroscopy may help solve this problem. Over 60 flight lines of NASA Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data were collected over New Orleans, the Mississippi Delta, and the Gulf Coast from one to two weeks after Katrina while the contaminated water was being pumped out of flooded areas. These data provide a unique opportunity to test if imaging spectrometer data can be used to identify the chemistry of these flood-related plumes. Many chemicals have unique spectral signatures in the ultraviolet to near-infrared range (0.2 - 2.5 microns) that can be used as fingerprints for their identification. We are particularly interested in detecting thin films of oil, gasoline, diesel, and raw sewage suspended on or in water. If these materials can be successfully differentiated in the lab then we will use spectral-shape matching algorithms to look for their spectral signatures in the AVIRIS data collected over New Orleans and other areas impacted by Katrina. If imaging spectroscopy can be used to identify plume composition on a regional scale than this information would help emergency personnel prioritize evacuations, help government agencies formulate cleanup strategies, and help ecologists assess the potential damage to wetlands and wildlife. This work could be the start of a new application of hyperspectral data for world-wide monitoring of spills from space-based imaging spectrometers. AVIRIS data used to test our method were corrected for solar flux, atmospheric absorptions, and scattering using the Atmospheric CORrection Now (ACORN) radiative transfer algorithm and residual artifacts were removed using ground spectra of a concrete runway at the Gulfport Airport in Mississippi. The resulting apparent reflectance data were mapped for spectral signatures of pollution plumes and results will be presented.

Classification of the LCVF AVIRIS test site with a Kohonen artificial neural network

NASA Technical Reports Server (NTRS)

Merenyi, Erzsebet; Singer, Robert B.; Farrand, William H.

1993-01-01

We present a classification of an AVIRIS spectral image of the Lunar Crater Volcanic Field (LCVF). Geologic mapping from such data is made possible by distinctive mineral signatures: absorption features and the shape of the spectral continuum. The subtle spectral shape differences between some of the geological units in this scene along with the high dimensionality of the spectral presents a challenging pattern recognition task. We found an artificial neural network powerful in separating 13 geological units based on the full spectral resolution. The LCVF, in northern Nye County, Nevada, was the primary focus of the NASA-sponsored Geologic Remote Sensing Field Experiment in the summer of 1989. It consists of over 100 square miles of Quaternary basaltic pyroclastic and flow deposits. These deposits lie atop ignimbrites and silicic lava flows of Tertiary age and in turn are overlain by Quaternary alluvial and playa deposits. This AVIRIS image was collected on September 29, 1989 at 11:44 at 11:44 PDT. The 256-by-256 pixel subsection in this study contains oxidized basaltic cinder deposits, the southern half of the Lunar Lake playa, and outcrops of the Rhyollite of Big Sand Spring Valley. Vegetation in LCVF is sparse, but locally abundant within washes and near springs.

Evaluation of Airborne Visible/Infrared Imaging Spectrometer Data of the Mountain Pass, California carbonatite complex

NASA Technical Reports Server (NTRS)

Crowley, James; Rowan, Lawrence; Podwysocki, Melvin; Meyer, David

1988-01-01

Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data of the Mountain Pass, California carbonatite complex were examined to evaluate the AVIRIS instrument performance and to explore alternative methods of data calibration. Although signal-to-noise estimates derived from the data indicated that the A, B, and C spectrometers generally met the original instrument design objectives, the S/N performance of the D spectrometer was below expectations. Signal-to-noise values of 20 to 1 or lower were typical of the D spectrometer and several detectors in the D spectrometer array were shown to have poor electronic stability. The AVIRIS data also exhibited periodic noise, and were occasionally subject to abrupt dark current offsets. Despite these limitations, a number of mineral absorption bands, including CO3, Al-OH, and unusual rare earth element bands, were observed for mine areas near the main carbonatite body. To discern these bands, two different calibration procedures were applied to remove atmospheric and solar components from the remote sensing data. The two procedures, referred to as the single spectrum and the flat field calibration methods gave distinctly different results. In principle, the single spectrum method should be more accurate; however, additional fieldwork is needed to rigorously determine the degree of calibration success.

Spatial patterns of vegetation biomass and soil organic carbon acquired from airborne lidar and hyperspectral imagery at Reynolds Creek Critical Zone Observatory

NASA Astrophysics Data System (ADS)

Will, R. M.; Li, A.; Glenn, N. F.; Benner, S. G.; Spaete, L.; Ilangakoon, N. T.

2015-12-01

Soil organic carbon distribution and the factors influencing this distribution are important for understanding carbon stores, vegetation dynamics, and the overall carbon cycle. Linking soil organic carbon (SOC) with aboveground vegetation biomass may provide a method to better understand SOC distribution in semiarid ecosystems. The Reynolds Creek Critical Zone Observatory (RC CZO) in Idaho, USA, is approximately 240 square kilometers and is situated in the semiarid Great Basin of the sagebrush-steppe ecosystem. Full waveform airborne lidar data and Next-Generation Airborne Visible/Infrared Imaging Spectrometer (AVIRIS-ng) collected in 2014 across the RC CZO are used to map vegetation biomass and SOC and then explore the relationships between them. Vegetation biomass is estimated by identifying vegetation species, and quantifying distribution and structure with lidar and integrating the field-measured biomass. Spectral data from AVIRIS-ng are used to differentiate non-photosynthetic vegetation (NPV) and soil, which are commonly confused in semiarid ecosystems. The information from lidar and AVIRIS-ng are then used to predict SOC by partial least squares regression (PLSR). An uncertainty analysis is provided, demonstrating the applicability of these approaches to improving our understanding of the distribution and patterns of SOC across the landscape.

HMM for hyperspectral spectrum representation and classification with endmember entropy vectors

NASA Astrophysics Data System (ADS)

Arabi, Samir Y. W.; Fernandes, David; Pizarro, Marco A.

2015-10-01

The Hyperspectral images due to its good spectral resolution are extensively used for classification, but its high number of bands requires a higher bandwidth in the transmission data, a higher data storage capability and a higher computational capability in processing systems. This work presents a new methodology for hyperspectral data classification that can work with a reduced number of spectral bands and achieve good results, comparable with processing methods that require all hyperspectral bands. The proposed method for hyperspectral spectra classification is based on the Hidden Markov Model (HMM) associated to each Endmember (EM) of a scene and the conditional probabilities of each EM belongs to each other EM. The EM conditional probability is transformed in EM vector entropy and those vectors are used as reference vectors for the classes in the scene. The conditional probability of a spectrum that will be classified is also transformed in a spectrum entropy vector, which is classified in a given class by the minimum ED (Euclidian Distance) among it and the EM entropy vectors. The methodology was tested with good results using AVIRIS spectra of a scene with 13 EM considering the full 209 bands and the reduced spectral bands of 128, 64 and 32. For the test area its show that can be used only 32 spectral bands instead of the original 209 bands, without significant loss in the classification process.

Mineral Mapping with Imaging Spectroscopy: The Ray Mine, AZ

NASA Technical Reports Server (NTRS)

Clark, Roger N.; Vance, J. Sam; Livo, K. Eric; Green, Robert O.

1998-01-01

Mineral maps generated for the Ray Mine, Arizona were analyzed to determine if imaging spectroscopy can provide accurate information for environmental management of active and abandoned mine regions. The Ray Mine, owned by the ASARCO Corporation, covers an area of 5700 acres and is situated in Pinal County, Arizona about 70 miles north of Tucson near Hayden, Arizona. This open-pit mine has been a major source of copper since 1911, producing an estimated 4.5 million tons of copper since its inception. Until 1955 mining was accomplished by underground block caving and shrinkage stope methods. (excavation by working in stepped series usually employed in a vertical or steeply inclined orebody) In 1955, the mine was completely converted to open pit method mining with the bulk of the production from sulfide ore using recovery by concentrating and smelting. Beginning in 1969 a significant production contribution has been from the leaching and solvent extraction-electrowinnowing method of silicate and oxide ores. Published reserves in the deposit as of 1992 are 1.1 billion tons at 0.6 percent copper. The Environmental Protection Agency, in conjunction with ASARCO, and NASA/JPL obtained AVIRIS data over the mine in 1997 as part of the EPA Advanced Measurement Initiative (AMI) (Tom Mace, Principal Investigator). This AVIRIS data set is being used to compare and contrast the accuracy and environmental monitoring capabilities of remote sensing technologies: visible-near-IR imaging spectroscopy, multispectral visible and, near-IR sensors, thermal instruments, and radar platforms. The goal of this effort is to determine if these various technologies provide useful information for envirorunental management of active and abandoned mine sites in the arid western United States. This paper focuses on the analysis of AVIRIS data for assessing the impact of the Ray Mine on Mineral Creek. Mineral Creek flows to the Gila River. This paper discusses our preliminary AVIRIS mineral mapping and environmental findings.

Low Altitude AVIRIS Data for Mapping Land Form Types on West Ship Island, Mississippi

NASA Technical Reports Server (NTRS)

Spruce, Joseph P.; Otvos, Ervin G.; Giardino, Marco J.

2002-01-01

Barrier islands help protect the southern and southeastern U.S. shoreline from hurricanes and severe storms. They are important for coastal resource management and geologic research, especially in studies that involve changes in island areas and surface environments, and they display a dynamically changing and diverse mix of landform and vegetative cover habitats. Many Gulf Coast barrier islands have undergone dramatic decreases in areal extent, often due to hurricane and severe storm damage. For example, Louisiana's barrier islands have lost 55 percent of their surface area over the past 100 years. Aerial photography and Landsat data have been used to monitor changes in barrier island areal extent, although neither data source is optimal for making maps of detailed landform types at site-specific scales. High spatial resolution hyperspectral imagery, such as that obtained from the high spatial resolution Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) sensor, may enable improved mapping of landform types, which would benefit studies of the dynamics of barrier island environments. During the summers of 2000 and 2001, a study was conducted to assess low-altitude AVIRIS data for mapping the landform types of West Ship Island, a barrier island in Harrison County, Mississippi. This study area was selected because of the availability of low-altitude AVIRIS data acquired on July 22, 1999, and because of the area's accessibility to the investigating team. West Ship Island is one of the six barrier islands that belong to the Gulf Shores National Seashore, which is managed by the National Park Service. This island contains an impressive range of landform categories. Surface types include beach, dune, and sand flat environments. West Ship Island also harbors Fort Massachusetts, a historic fort used during the Civil War. Because it is located near Stennis Space Center, the island is frequently imaged by NASA's airborne and spaceborne sensors.

Monitoring of Volcanogenic CO2-Induced Tree Kills with AVIRIS Image Data at Mammoth Mountain, California

NASA Technical Reports Server (NTRS)

Hausback, Brian P.; Strong, Mel; Farrar, Chris; Pieri, David

1998-01-01

Elevated cold CO2 emissions from the flank of Mammoth Mountain volcano on the southwest rim of the Long Valley Caldera, eastern California, have been the cause of over 100 acres of dead trees in that area since 1990. The source of the CO2 gas is thought to be from one or more magmatic intrusion(s) beneath Mammoth Mountain and is probably related to a period of seismic unrest that began in 1989. The gas rises to the surface probably from depths of a few kilometers, along faults and fracture zones. The gas is at ambient temperature and diffuses from the soil rather than discharging from distinct vents. Typically, soil gas concentrations in tree-kill areas range from 10% to over 90% CO2 by volume, as compared to normal background of < 1% in healthy forest. The gas composition is predominantly CO2 mixed with air (sulfur gases are not elevated), and C and He isotopic ratios are consistent with a magmatic origin for the gas. The total CO2 emission has been estimated at 1200 tons/day, comparable to the emissions at Kilauea. Some of the dead trees are as old as 250 years, suggesting that similar anomalous gas discharge has not occurred over the previous few hundred years. The delta C-13/12 ratio in the Mammoth Mountain CO2 emission averages about -4.5 (PDB standard). This is consistent with a mantle source for the carbon. However, the large volume of the emission suggests that not all of the CO2 is necessarily being generated from the 1989 intrusion. The voluminous gas could be leaking from a vapor-rich zone, capped by an impermeable layer, that was supplied CO2 from degassing of many small magma bodies that intruded beneath the mountain over a period of decades or centuries. Earthquakes in 1989 could have fractured the capping layer and provided pathways for the escape Of CO2 to the surface. Alternatively, some of the CO2 could be derived from contact metamorphism of carbonate rocks intruded by magma. Carbonate-bearing Paleozoic roof pendents crop out in close proximity to Mammoth Mountain. It is possible that similar rocks could occur at depth beneath Mammoth Mountain, and could have contributed CO2 from thermal decomposition caused from recent intrusions. We hope to determine the C-13/12 ratio of a suite of samples to demonstrate if the carbonate rocks could be the source of at least part of the 1990-97 CO2 emission. To better understand the behavior of the CO2 gas, we have used hyperspectral imagery data of Mammoth Mountain acquired from the Airborne Visual/Infrared Imaging Spectrometer (AVIRIS) to map out areas of dead trees. The areas of tree kill have increased in size from about 50 acres in 1994 to about 100 acres in 1997. Tree kill is the major surface manifestation of the carbon dioxide flux at Mammoth Mountain, is widely dispersed, and has been cursorily mapped by regular field mapping techniques in the area. Initial investigations using airborne digital imagery from the Thematic Mapper Simulator (NS001) and AVIRIS instruments have shown extremely encouraging results for complete delineation of the vegetation anomalies. The most successful maps (when compared with ground truth) were developed using AVIRIS data with spectral angle mapper and matched filter algorithms with a data set that was reduced to maximum variance via the minimum noise fraction transformation. The result of this work is a series of maps that show the tree kill areas occurring in an halo-pattern surrounding the base of Mammoth Mountain. We are applying these same techniques to earlier AVIRIS images of Mammoth Mountain to examine the progression of the tree kill areas over time. Temporal maps of the tree kill areas may assist in constructing a picture of the structure beneath Mammoth Mountain.

Monte Carlo simulation of x-ray spectra in diagnostic radiology and mammography using MCNP4C

NASA Astrophysics Data System (ADS)

Ay, M. R.; Shahriari, M.; Sarkar, S.; Adib, M.; Zaidi, H.

2004-11-01

The general purpose Monte Carlo N-particle radiation transport computer code (MCNP4C) was used for the simulation of x-ray spectra in diagnostic radiology and mammography. The electrons were transported until they slow down and stop in the target. Both bremsstrahlung and characteristic x-ray production were considered in this work. We focus on the simulation of various target/filter combinations to investigate the effect of tube voltage, target material and filter thickness on x-ray spectra in the diagnostic radiology and mammography energy ranges. The simulated x-ray spectra were compared with experimental measurements and spectra calculated by IPEM report number 78. In addition, the anode heel effect and off-axis x-ray spectra were assessed for different anode angles and target materials and the results were compared with EGS4-based Monte Carlo simulations and measured data. Quantitative evaluation of the differences between our Monte Carlo simulated and comparison spectra was performed using student's t-test statistical analysis. Generally, there is a good agreement between the simulated x-ray and comparison spectra, although there are systematic differences between the simulated and reference spectra especially in the K-characteristic x-rays intensity. Nevertheless, no statistically significant differences have been observed between IPEM spectra and the simulated spectra. It has been shown that the difference between MCNP simulated spectra and IPEM spectra in the low energy range is the result of the overestimation of characteristic photons following the normalization procedure. The transmission curves produced by MCNP4C have good agreement with the IPEM report especially for tube voltages of 50 kV and 80 kV. The systematic discrepancy for higher tube voltages is the result of systematic differences between the corresponding spectra.

Temporal variation in spectral detection thresholds of substrate and vegetation in AVIRIS images

NASA Technical Reports Server (NTRS)

Sabol, Donald E., Jr.; Roberts, Dar A.; Smith, Milton O.; Adams, John B.

1992-01-01

The ability to map changes over large surface areas over time is one of the advantages in using remote sensing as a monitoring tool. Temporal changes in the surface may be gradual, making them difficult to detect in the short-term, and because they commonly occur at the subpixel scale, they may be difficult to detect in the long-term as well. Also, subtle changes may be real or merely an artifact of image noise. It is, therefore, necessary to understand the factors that limit the detection of surface materials in evaluating temporal data. The spectral detectability of vegetation and soil in the 1990 July and October Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data of Jasper Ridge, CA was evaluated and compared.

MAC Europe 1991 campaign: AIRSAR/AVIRIS data integration for agricultural test site classification

NASA Technical Reports Server (NTRS)

Sangiovanni, S.; Buongiorno, M. F.; Ferrarini, M.; Fiumara, A.

1993-01-01

During summer 1991, multi-sensor data were acquired over the Italian test site 'Otrepo Pavese', an agricultural flat area in Northern Italy. This area has been the Telespazio pilot test site for experimental activities related to agriculture applications. The aim of the investigation described in the following paper is to assess the amount of information contained in the AIRSAR (Airborne Synthetic Aperture Radar) and AVIRIS (Airborne Visible/Infrared Imaging Spectrometer) data, and to evaluate classification results obtained from each sensor data separately and from the combined dataset. All classifications are examined by means of the resulting confusion matrices and Khat coefficients. Improvements of the classification results obtained by using the integrated dataset are finally evaluated.

Imaging spectrometry - Technology and applications

NASA Technical Reports Server (NTRS)

Solomon, Jerry E.

1989-01-01

The development history and current status of NASA imaging-spectrometer (IS) technology are discussed in a review covering the period 1982-1988. Consideration is given to the Airborne IS first flown in 1982, the second-generation Airborne Visible and IR IS (AVIRIS), the High-Resolution IS being developed for the EOS polar platform, improved two-dimensional focal-plane arrays for the short-wave IR spectral region, and noncollinear acoustooptic tunable filters for use as spectral dispersing elements. Also examined are approaches to solving the data-processing problems posed by the high data volumes of state-of-the-art ISs (e.g., 160 MB per 600 x 600-pixel AVIRIS scene), including intelligent data editing, lossless and lossy data compression techniques, and direct extraction of scientifically meaningful geophysical and biophysical parameters.

Mapping mine wastes and analyzing areas affected by selenium-rich water runoff in southeast Idaho using AVIRIS imagery and digital elevation data

USGS Publications Warehouse

Mars, J.C.; Crowley, J.K.

2003-01-01

Remotely sensed hyperspectral and digital elevation data from southeastern Idaho are combined in a new method to assess mine waste contamination. Waste rock from phosphorite mining in the area contains selenium, cadmium, vanadium, and other metals. Toxic concentrations of selenium have been found in plants and soils near some mine waste dumps. Eighteen mine waste dumps and five vegetation cover types in the southeast Idaho phosphate district were mapped by using Airborne Visible-Infrared Imaging Spectrometer (AVIRIS) imagery and field data. The interaction of surface water runoff with mine waste was assessed by registering the AVIRIS results to digital elevation data, enabling determinations of (1) mine dump morphologies, (2) catchment watershed areas above each mine dump, (3) flow directions from the dumps, (4) stream gradients, and (5) the extent of downstream wetlands available for selenium absorption. Watersheds with the most severe selenium contamination, such as the South Maybe Canyon watershed, are associated with mine dumps that have large catchment watershed areas, high stream gradients, a paucity of downstream wetlands, and dump forms that tend to obstruct stream flow. Watersheds associated with low concentrations of dissolved selenium, such as Angus Creek, have mine dumps with small catchment watershed areas, low stream gradients, abundant wetlands vegetation, and less obstructing dump morphologies. ?? 2002 Elsevier Science Inc. All rights reserved.

Characterizing Methane Emissions at Local Scales with a 20 Year Total Hydrocarbon Time Series, Imaging Spectrometry, and Web Facilitated Analysis

NASA Astrophysics Data System (ADS)

Bradley, Eliza Swan

Methane is an important greenhouse gas for which uncertainty in local emission strengths necessitates improved source characterizations. Although CH4 plume mapping did not motivate the NASA Airborne Visible InfraRed Imaging Spectrometer (AVIRIS) design and municipal air quality monitoring stations were not intended for studying marine geological seepage, these assets have capabilities that can make them viable for studying concentrated (high flux, highly heterogeneous) CH4 sources, such as the Coal Oil Point (COP) seep field (˜0.015 Tg CH4 yr-1) offshore Santa Barbara, California. Hourly total hydrocarbon (THC) data, spanning 1990 to 2008 from an air pollution station located near COP, were analyzed and showed geologic CH4 emissions as the dominant local source. A band ratio approach was developed and applied to high glint AVIRIS data over COP, resulting in local-scale mapping of natural atmospheric CH4 plumes. A Cluster-Tuned Matched Filter (CTMF) technique was applied to Gulf of Mexico AVIRIS data to detect CH4 venting from offshore platforms. Review of 744 platform-centered CTMF subsets was facilitated through a flexible PHP-based web portal. This dissertation demonstrates the value of investigating municipal air quality data and imaging spectrometry for gathering insight into concentrated methane source emissions and highlights how flexible web-based solutions can help facilitate remote sensing research.

Environmental mapping of the World Trade Center area with imaging spectroscopy after the September 11, 2001 attack

USGS Publications Warehouse

Clark, Roger N.; Swayze, Gregg A.; Hoefen, Todd M.; Green, Robert O.; Livo, Keith E.; Meeker, Gregory P.; Sutley, Stephen J.; Plumlee, Geoffrey S.; Pavri, Betina; Sarture, Charles M.; Boardman, Joe; Brownfield, Isabelle; Morath, Laurie C.

2009-01-01

The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) was flown over the World Trade Center area on September 16, 18, 22, and 23, 2001. The data were used to map the WTC debris plume and its contents, including the spectral signatures of asbestiform minerals. Samples were collected and used as ground truth for the AVARIS mapping. A number of thermal hot spots were observed with temperatures greater than 700 °C. The extent and temperatures of the fires were mapped as a function of time. By September 23, most of the fires observed by AVIRIS had been eliminated or reduced in intensity. The mineral absorption features mapped by AVARIS only indicated the presence of serpentine mineralogy and not if the serpentine has asbestiform.

SpectraPLOT, Visualization Package with a User-Friendly Graphical Interface

NASA Astrophysics Data System (ADS)

Sebald, James; Macfarlane, Joseph; Golovkin, Igor

2017-10-01

SPECT3D is a collisional-radiative spectral analysis package designed to compute detailed emission, absorption, or x-ray scattering spectra, filtered images, XRD signals, and other synthetic diagnostics. The spectra and images are computed for virtual detectors by post-processing the results of hydrodynamics simulations in 1D, 2D, and 3D geometries. SPECT3D can account for a variety of instrumental response effects so that direct comparisons between simulations and experimental measurements can be made. SpectraPLOT is a user-friendly graphical interface for viewing a wide variety of results from SPECT3D simulations, and applying various instrumental effects to the simulated images and spectra. We will present SpectraPLOT's ability to display a variety of data, including spectra, images, light curves, streaked spectra, space-resolved spectra, and drilldown plasma property plots, for an argon-doped capsule implosion experiment example. Future SpectraPLOT features and enhancements will also be discussed.

Monte Carlo turbulence simulation using rational approximations to von Karman spectra

NASA Technical Reports Server (NTRS)

Campbell, C. W.

1986-01-01

Turbulence simulation is computationally much simpler using rational spectra, but turbulence falls off as f exp -5/3 in frequency ranges of interest to aircraft response and as predicted by von Karman's model. Rational approximations to von Karman spectra should satisfy three requirements: (1) the rational spectra should provide a good approximation to the von Karman spectra in the frequency range of interest; (2) for stability, the resulting rational transfer function should have all its poles in the left half-plane; and (3) at high frequencies, the rational spectra must fall off as an integer power of frequency, and since the -2 power is closest to the -5/3 power, the rational approximation should roll off as the -2 power at high frequencies. Rational approximations to von Karman spectra that satisfy these three criteria are presented, along with spectra from simulated turbulence. Agreement between the spectra of the simulated turbulence and von Karman spectra is excellent.

NASA ER-2 Flies over Southern California Wildfires

NASA Image and Video Library

2017-12-11

NASA pilot Tim Williams flies the ER-2 high altitude airborne science platform carrying Jet Propulsion Laboratory’s AVIRIS spectral instrument over the Southern California wildfires on December 7, 2017.

HYDICE data from Lake Tahoe: comparison to coincident AVIRIS and in-situ measurements

NASA Astrophysics Data System (ADS)

Kappus, Mary E.; Davis, Curtiss O.; Rhea, W. J.

1996-11-01

Coordinated flights of two calibrated airborne imaging spectrometers, HYDICE and AVIRIS, were conducted on June 22, 1995 over Lake Tahoe. As part of HYDICE's first operational mission, one objective was to test the system performance over the dark homogeneous target provided by the clear deep waters of the lake. The high altitude and clear atmosphere makes Lake Tahoe a simpler test target than near-shore marine environments, where large aerosols complicate atmospheric correction and sediment runoff and high chlorophyll levels make interpretation of he data difficult. Calibrated data from both runoff and high chlorophyll levels make interpretation of the data difficult. Calibrated data from both sensors was provided in physical units of radiance. The atmospheric radiative transfer code, MODTRAN was used to remove the path radiance between the ground and sensor and the skylight reflected from the water surface. The resulting water-leaving spectrometer, and with values calculated form in-water properties using the HYDROLIGHT radiative transfer code. The agreement of the water-leaving radiance for the HYDICE data, the ground-truth spectral measurements, and the results of the radiative transfer code are excellent for wavelengths greater than 0.45 micrometers . The AVIRIS flight took place more than an hour closer to noon, which makes the radiance measurements not directly comparable. Comparisons to radiative transfer output for this later time indicate that the AVIRIS data is strongly by sun glint. Because water-leaving radiance is dependent upon the characteristics of the water, it can be analyzed for some of those properties. Using the CZCS algorithm based on the water-leaving radiance at two wavelengths, the chlorophyll content of Lake Tahoe was computed from the HYDICE and ground-truth data. Resulting values are slightly higher than measurements made two weeks earlier from water samples, indicating a growth in the phytoplankton population which is very plausible given the intervening atmospheric conditions. The success in determining water-leaving radiance and interpreting it for pigment concentration are very positive results for this early HYDICE flight. The interpretations made so far do not make use of the full spectral content of the data, so much room for advancement remains.

Using Imaging Spectroscopy to Map Changing Distributions of Dominant Species in Oil-Contaminated Salt Marshes of Louisiana

NASA Astrophysics Data System (ADS)

Beland, M. C.; Roberts, D. A.; Peterson, S.; Biggs, T. W.; Kokaly, R. F.; Piazza, S.; Roth, K. L.; Khanna, S.; Ustin, S.

2016-12-01

The April 2010 Deepwater Horizon (DWH) oil spill was the largest coastal spill in U.S. history. Monitoring subsequent change in marsh plant community distributions is critical to assess ecosystem impacts and to establish future coastal management priorities. Strategically deployed airborne imaging spectrometers, like the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), offer the spectral and spatial resolution needed to differentiate plant species. However, obtaining satisfactory and consistent classification accuracies over time is a major challenge, particularly in dynamic intertidal landscapes. Here, we develop and evaluate an image classification system for a time series of AVIRIS data for mapping dominant species in a heavily oiled salt marsh ecosystem. Using field-referenced image endmembers and canonical discriminant analysis (CDA), we classified 21 AVIRIS images acquired during the fall of 2010, 2011 and 2012. Classification results were evaluated using ground surveys that were conducted contemporaneously to AVIRIS collection dates. We analyzed changes in dominant species cover from 2010-2012 for oiled and non-oiled shorelines. CDA discriminated dominant species with a high level of accuracy (overall accuracy = 82%, kappa = 0.78) and consistency over three imaging dates (overall2010 = 82%, overall2011 = 82%, overall2012 = 88%). Marshes dominated by Spartina alterniflora were the most spatially abundant in shoreline zones (≤ 28m from shore) for all three dates (2010 = 79%, 2011 = 61%, 2012 = 63%), followed by Juncus roemerianus (2010 = 11%, 2011 = 19%, 2012 = 17%) and Distichlis spicata (2010 = 4%, 2011 = 10%, 2012 = 7%). Marshes that were heavily contaminated with oil exhibited variable responses from 2010-2012. Marsh vegetation classes converted to a subtidal, open water class along oiled and non-oiled shorelines that were similarly situated in the landscape. However, marsh loss along oil-contaminated shorelines doubled that of non-oiled shorelines. Only Spartina alterniflora dominated marshes were extensively degraded, losing 15% (354,604 m2) cover in oiled shoreline zones, suggesting that Spartina alterniflora marshes may be more vulnerable to shoreline erosion following hydrocarbon stress, due to their landscape position.

Spectroscopic mapping of the white horse alunite deposit, Marysvale volcanic field, Utah: Evidence of a magmatic component

USGS Publications Warehouse

Rockwell, B.W.; Cunningham, C.G.; Breit, G.N.; Rye, R.O.

2006-01-01

Previous studies have demonstrated that the replacement alunite deposits just north of the town of Marysvale, Utah, USA, were formed primarily by low-temperature (100??-170?? C), steam-heated processes near the early Miocene paleoground surface, immediately above convecting hydrothermal plumes. Pyrite-bearing propylitically altered rocks occur mainly beneath the steam-heated alunite and represent the sulfidized feeder zone of the H2S-dominated hydrothermal fluids, the oxidation of which at higher levels led to the formation of the alunite. Maps of surface mineralogy at the White Horse deposit generated from Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data were used in conjunction with X-ray diffraction studies of field samples to test the accuracy and precision of AVIRIS-based mineral mapping of altered rocks and demonstrate the utility of spectroscopic mapping for ore deposit characterization. The mineral maps identified multiple core zones of alunite that grade laterally outward to kaolinite. Surrounding the core zones are dominantly propylitically altered rocks containing illite, montmorillonite, and chlorite, with minor pyrite, kaolinite, gypsum, and remnant potassium feldspar from the parent rhyodacitic ash-flow tuff. The AVIRIS mapping also identified fracture zones expressed by ridge-forming selvages of quartz + dickite + kaolinite that form a crude ring around the advanced argillic core zones. Laboratory analyses identified the aluminum phosphate-sulfate (APS) minerals woodhouseite and svanbergite in one sample from these dickite-bearing argillic selvages. Reflectance spectroscopy determined that the outer edges of the selvages contain more dickite than do the medial regions. The quartz + dickite ?? kaolinite ?? APS-mineral selvages demonstrate that fracture control of replacement processes is more prevalent away from the advanced argillic core zones. Although not exposed at the White Horse deposit, pyrophyllite ?? ordered illite was identified using AVIRIS in localized, superimposed conduits within propylitically altered rocks in nearby alteration systems of similar age and genesis that have been eroded to deeper levels. The fracture zones bearing pyrophyllite, illite, dickite, natroalunite, and/or APS minerals indicate a magmatic component in the dominantly steam-heated system. ?? 2006 Society of Economic Geologists, Inc.

SpectraPlot.com: Integrated spectroscopic modeling of atomic and molecular gases

NASA Astrophysics Data System (ADS)

Goldenstein, Christopher S.; Miller, Victor A.; Mitchell Spearrin, R.; Strand, Christopher L.

2017-10-01

SpectraPlot is a web-based application for simulating spectra of atomic and molecular gases. At the time this manuscript was written, SpectraPlot consisted of four primary tools for calculating: (1) atomic and molecular absorption spectra, (2) atomic and molecular emission spectra, (3) transition linestrengths, and (4) blackbody emission spectra. These tools currently employ the NIST ASD, HITRAN2012, and HITEMP2010 databases to perform line-by-line simulations of spectra. SpectraPlot employs a modular, integrated architecture, enabling multiple simulations across multiple databases and/or thermodynamic conditions to be visualized in an interactive plot window. The primary objective of this paper is to describe the architecture and spectroscopic models employed by SpectraPlot in order to provide its users with the knowledge required to understand the capabilities and limitations of simulations performed using SpectraPlot. Further, this manuscript discusses the accuracy of several underlying approximations used to decrease computational time, in particular, the use of far-wing cutoff criteria.

Analysis Of AVIRIS Data From LEO-15 Using Tafkaa Atmospheric Correction

NASA Technical Reports Server (NTRS)

Montes, Marcos J.; Gao, Bo-Cai; Davis, Curtiss O.; Moline, Mark

2004-01-01

We previously developed an algorithm named Tafkaa for atmospheric correction of remote sensing ocean color data from aircraft and satellite platforms. The algorithm allows quick atmospheric correction of hyperspectral data using lookup tables generated with a modified version of Ahmad & Fraser s vector radiative transfer code. During the past few years we have extended the capabilities of the code. Current modifications include the ability to account for within scene variation in solar geometry (important for very long scenes) and view geometries (important for wide fields of view). Additionally, versions of Tafkaa have been made for a variety of multi-spectral sensors, including SeaWiFS and MODIS. In this proceeding we present some initial results of atmospheric correction of AVIRIS data from the 2001 July Hyperspectral Coastal Ocean Dynamics Experiment (HyCODE) at LEO-15.

Temporal and spatial patterns in vegetation and atmospheric properties from AVIRIS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Roberts, D.A.; Green, R.O.; Adams, J.B.

1997-12-01

Little research has focused on the use of imaging spectrometry for change detection. In this paper, the authors apply Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data to the monitoring of seasonal changes in atmospheric water vapor, liquid water, and surface cover in the vicinity of the Jasper Ridge, CA, for three dates in 1992. Apparent surface reflectance was retrieved and water vapor and liquid water mapped by using a radiative-transfer-based inversion that accounts for spatially variable atmospheres. Spectral mixture analysis (SMA) was used to model reflectance data as mixtures of green vegetation (GV), nonphotosynthetic vegetation (NPV), soil, and shade. Temporal andmore » spatial patterns in endmember fractions and liquid water were compared to the normalized difference vegetation index (NDVI). The reflectance retrieval algorithm was tested by using a temporally invariant target.« less

The Use 0f AVIRIS Imagery To Assess Clay Mineralogy And Debris-Flow Potential In Cataract Canyon, Utah: A Preliminary Report

NASA Technical Reports Server (NTRS)

Rudd, Lawrence; Merenyi, Erzsebet

2004-01-01

Worldwide debris flows destroy property and take human lives every year (Costa, 1984). As a result of extensive property damage and loss of life there is a pressing need to go beyond just describing the nature and extent of debris flows as they occur. Most of the research into debris-flow initiation has centered on rainfall, slope angle, and existing debris-flow deposits (Costa and Wieczorek, 1987). The factor of source lithology has been recently addressed by studies in the sedimentary terranes of Grand Canyon (Webb et al., 1996; Griffiths et al., 1996) and on the Colorado Plateau as a whole.3 On the Colorado Plateau shales dominated by kaolinite and illite clays are significantly more likely to be recent producers of debris-flows than are shales in which smectite clays dominate.3 Establishing the location of shales and colluvial deposits containing kaolinite and illite clays in sedimentary terranes on the Colorado Plateau is essential to predicting where debris flows are likely to occur. AVIRIS imagery can be used to distinguish between types of clay minerals (Chabrillat et al., 2001), providing the basis for surface-materials maps. The ultimate product of this study will be a model that can be used to estimate the debris-flow hazard in Cataract Canyon, Utah. This model will be based on GIS overlay analysis of debris-flow initiation factor maps, including surface-materials maps derived from AVIRIS data.

Multiyear Multiseasonal Changes in Leaf and Canopy Traits Measured by AVIRIS over Ecosystems with Different Functional Type Characteristics Through the Progressive California Drought 2013-2015

NASA Astrophysics Data System (ADS)

Ustin, S.; Roth, K. L.; Huesca, M.; Casas, A.; Adeline, K.; Drewry, D.; Koltunov, A.; Ramirez, C.

2015-12-01

Given the known heterogeneity in ecological processes within plant communities in California, we questioned whether the concept of conventional plant functional types (cPFTs) was adequate to characterize the functionality of the dominant species in these communities. We examined seasonal (spring, summer, fall) airborne AVIRIS and MASTER imagery collected during three years of progressive drought in California, and airborne LiDAR acquired once, for ecosystems that represent a wide range of plant functional types, from annual agriculture and herbaceous perennial wetlands, to forests and shrublands, including broadleaf deciduous and evergreen species and conifer species. These data were used to determine the extent to which changes in canopy chemistry could be detected, quantified, and related to leaf and canopy traits that are indicators of physiological functioning (water content, Leaf Mass Area, total C, N, and pigments (chlorophyll a, b, and carotenoids). At the canopy scale we measured leaf area index, and for forests — species, height, canopy area, DBH, deciduous or evergreen, broadleaf or needleleaf, and gap size. Strong correlations between leaf and canopy traits were predictable and quantifiable from spectroscopy data. Key structural properties of canopy height, biomass and complexity, a measure of spatial and vertical heterogeneity, were predicted by AVIRIS and validated against LiDAR data. Our data supports the hypothesis that optical sensors provide more detailed information about the distribution and variability in leaf and canopy traits related to plant functionality than cPFTs.

Simulation of RBS spectra with known 3D sample surface roughness

NASA Astrophysics Data System (ADS)

Malinský, Petr; Siegel, Jakub; Hnatowicz, Vladimir; Macková, Anna; Švorčík, Václav

2017-09-01

The Rutherford Backscattering Spectrometry (RBS) is a technique for elemental depth profiling with a nanometer depth resolution. Possible surface roughness of analysed samples can deteriorate the RBS spectra and makes their interpretation more difficult and ambiguous. This work describes the simulation of RBS spectra which takes into account real 3D morphology of the sample surface obtained by AFM method. The RBS spectrum is calculated as a sum of the many particular spectra obtained for randomly chosen particle trajectories over sample 3D landscape. The spectra, simulated for different ion beam incidence angles, are compared to the experimental ones measured with 2.0 MeV 4He+ ions. The main aim of this work is to obtain more definite information on how a particular surface morphology and measuring geometry affects the RBS spectra and derived elemental depth profiles. A reasonable agreement between the measured and simulated spectra was found and the results indicate that the AFM data on the sample surface can be used for the simulation of RBS spectra.

Database for Simulation of Electron Spectra for Surface Analysis (SESSA)Database for Simulation of Electron Spectra for Surface Analysis (SESSA)

National Institute of Standards and Technology Data Gateway

SRD 100 Database for Simulation of Electron Spectra for Surface Analysis (SESSA)Database for Simulation of Electron Spectra for Surface Analysis (SESSA) (PC database for purchase)   This database has been designed to facilitate quantitative interpretation of Auger-electron and X-ray photoelectron spectra and to improve the accuracy of quantitation in routine analysis. The database contains all physical data needed to perform quantitative interpretation of an electron spectrum for a thin-film specimen of given composition. A simulation module provides an estimate of peak intensities as well as the energy and angular distributions of the emitted electron flux.

Simulation of APEX data: the SENSOR approach

NASA Astrophysics Data System (ADS)

Boerner, Anko; Schaepman, Michael E.; Schlaepfer, Daniel; Wiest, Lorenz; Reulke, Ralf

1999-10-01

The consistent simulation of airborne and spaceborne hyperspectral data is an important task and sometimes the only way for the adaptation and optimization of a sensor and its observing conditions, the choice and test of algorithms for data processing, error estimations and the evaluation of the capabilities of the whole sensor system. The integration of three approaches is suggested for the data simulation of APEX (Airborne Prism Experiment): (1) a spectrally consistent approach (e.g. using AVIRIS data), (2) a geometrically consistent approach (e.g. using CASI data), and (3) an end-to- end simulation of the sensor system. In this paper, the last approach is discussed in detail. Such a technique should be used if there is no simple deterministic relation between input and output parameters. The simulation environment SENSOR (Software Environment for the Simulation of Optical Remote Sensing Systems) presented here includes a full model of the sensor system, the observed object and the atmosphere. The simulator consists of three parts. The first part describes the geometrical relations between object, sun, and sensor using a ray tracing algorithm. The second part of the simulation environment considers the radiometry. It calculates the at-sensor-radiance using a pre-calculated multidimensional lookup-table for the atmospheric boundary conditions and bi- directional reflectances. Part three consists of an optical and an electronic sensor model for the generation of digital images. Application-specific algorithms for data processing must be considered additionally. The benefit of using an end- to-end simulation approach is demonstrated, an example of a simulated APEX data cube is given, and preliminary steps of evaluation of SENSOR are carried out.

SimLabel: a graphical user interface to simulate continuous wave EPR spectra from site-directed spin labeling experiments.

PubMed

Etienne, E; Le Breton, N; Martinho, M; Mileo, E; Belle, V

2017-08-01

Site-directed spin labeling (SDSL) combined with continuous wave electron paramagnetic resonance (cw EPR) spectroscopy is a powerful technique to reveal, at the residue level, structural transitions in proteins. SDSL-EPR is based on the selective grafting of a paramagnetic label on the protein under study, followed by cw EPR analysis. To extract valuable quantitative information from SDSL-EPR spectra and thus give reliable interpretation on biological system dynamics, numerical simulations of the spectra are required. Such spectral simulations can be carried out by coding in MATLAB using functions from the EasySpin toolbox. For non-expert users of MATLAB, this could be a complex task or even impede the use of such simulation tool. We developed a graphical user interface called SimLabel dedicated to run cw EPR spectra simulations particularly coming from SDSL-EPR experiments. Simlabel provides an intuitive way to visualize, simulate, and fit such cw EPR spectra. An example of SDSL-EPR spectra simulation concerning the study of an intrinsically disordered region undergoing a local induced folding is described and discussed. We believe that this new tool will help the users to rapidly obtain reliable simulated spectra and hence facilitate the interpretation of their results. Copyright © 2017 John Wiley & Sons, Ltd. Copyright © 2017 John Wiley & Sons, Ltd.

Development of Infrared Library Search Prefilters for Automotive Clear Coats from Simulated Attenuated Total Reflection (ATR) Spectra.

PubMed

Perera, Undugodage Don Nuwan; Nishikida, Koichi; Lavine, Barry K

2018-06-01

A previously published study featuring an attenuated total reflection (ATR) simulation algorithm that mitigated distortions in ATR spectra was further investigated to evaluate its efficacy to enhance searching of infrared (IR) transmission libraries. In the present study, search prefilters were developed from transformed ATR spectra to identify the assembly plant of a vehicle from ATR spectra of the clear coat layer. A total of 456 IR transmission spectra from the Paint Data Query (PDQ) database that spanned 22 General Motors assembly plants and served as a training set cohort were transformed into ATR spectra by the simulation algorithm. These search prefilters were formulated using the fingerprint region (1500 cm -1 to 500 cm -1 ). Both the transformed ATR spectra (training set) and the experimental ATR spectra (validation set) were preprocessed for pattern recognition analysis using the discrete wavelet transform, which increased the signal-to-noise of the ATR spectra by concentrating the signal in specific wavelet coefficients. Attenuated total reflection spectra of 14 clear coat samples (validation set) measured with a Nicolet iS50 Fourier transform IR spectrometer were correctly classified as to assembly plant(s) of the automotive vehicle from which the paint sample originated using search prefilters developed from 456 simulated ATR spectra. The ATR simulation (transformation) algorithm successfully facilitated spectral library matching of ATR spectra against IR transmission spectra of automotive clear coats in the PDQ database.

Properties of the Water Column and Bottom Derived from AVIRIS Data

NASA Technical Reports Server (NTRS)

Lee, Zhong-Ping; Carder, Kendall L.; Chen, F. Robert; Peacock, Thomas G.

2001-01-01

Using AVIRIS data as an example, we show in this study that the optical properties of the water column and bottom of a large, shallow area can be adequately retrieved using a model-driven optimization technique. The simultaneously derived properties include bottom depth, bottom albedo, and water absorption and backscattering coefficients, which in turn could be used to derive concentrations of chlorophyll, dissolved organic matter, and suspended sediments. The derived bottom depths were compared with a bathymetry chart and a boat survey and were found to agree very well. Also, the derived bottom-albedo image shows clear spatial patterns, with end members consistent with sand and seagrass. The image of absorption and backscattering coefficients indicates that the water is quite horizontally mixed. These results suggest that the model and approach used work very well for the retrieval of sub-surface properties of shallow-water environments even for rather turbid environments like Tampa Bay, Florida.

Visible and infrared linear detector arrays for the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS)

NASA Technical Reports Server (NTRS)

Bailey, Gary C.

1987-01-01

The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) instrument uses four separate focal plane assemblies consisting of line array detectors that are multiplexed to a common J-FET preamp using a FET switch multiplexing (MUX) technique. A 32-element silicon line array covers the spectral range from 0.41 to 0.70 microns. Three additional 64-element indium antimonide (InSb) line arrays cover the spectral range from 0.68 to 2.45 microns. The spectral sampling interval per detector element is nominally 9.8 nm, giving a total of 224 spectral channels. All focal planes operate at liquid nitrogen temperature and are housed in separate dewars. Electrical performance characteristics include a read noise of less than 1000 e(-) in all channels, response and dark nonuniformity of 5 percent peak to peak, and quantum efficiency of greater than 60 percent.

AVIRIS foreoptics, fiber optics and on-board calibrator

NASA Technical Reports Server (NTRS)

Chrisp, Michael P.; Chrien, Thomas G.; Steimle, L.

1987-01-01

The foreoptics, fiber optic system and calibration source of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) are described. The foreoptics, based on a modified Kennedy scanner, is coupled by optical fibers to the four spectrometers. The optical fibers allow convenient positioning of the spectrometers in the limited space and enable simple compensation of the scanner's thermal defocus (at the -23 C operating temp) by active control of the fiber focal plane position. A challenging requirement for the fiber optic system was the transmission to the spectral range 1.85 to 2.45 microns at .45 numerical aperture. This was solved with custom fluoride glass fibers from Verre Fluore. The onboard calibration source is also coupled to the spectrometers by the fibers and provides two radiometric levels and a reference spectrum to check the spectrometers' alignment. Results of the performance of the assembled subsystems are presented.

Impact of differences in the solar irradiance spectrum on surface reflectance retrieval with different radiative transfer codes

NASA Technical Reports Server (NTRS)

Staenz, K.; Williams, D. J.; Fedosejevs, G.; Teillet, P. M.

1995-01-01

Surface reflectance retrieval from imaging spectrometer data as acquired with the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) has become important for quantitative analysis. In order to calculate surface reflectance from remotely measured radiance, radiative transfer codes such as 5S and MODTRAN2 play an increasing role for removal of scattering and absorption effects of the atmosphere. Accurate knowledge of the exo-atmospheric solar irradiance (E(sub 0)) spectrum at the spectral resolution of the sensor is important for this purpose. The present study investigates the impact of differences in the solar irradiance function, as implemented in a modified version of 5S (M5S), 6S, and MODTRAN2, and as proposed by Green and Gao, on the surface reflectance retrieved from AVIRIS data. Reflectance measured in situ is used as a basis of comparison.

Objective determination of image end-members in spectral mixture analysis of AVIRIS data

NASA Technical Reports Server (NTRS)

Tompkins, Stefanie; Mustard, John F.; Pieters, Carle M.; Forsyth, Donald W.

1993-01-01

Spectral mixture analysis has been shown to be a powerful, multifaceted tool for analysis of multi- and hyper-spectral data. Applications of AVIRIS data have ranged from mapping soils and bedrock to ecosystem studies. During the first phase of the approach, a set of end-members are selected from an image cube (image end-members) that best account for its spectral variance within a constrained, linear least squares mixing model. These image end-members are usually selected using a priori knowledge and successive trial and error solutions to refine the total number and physical location of the end-members. However, in many situations a more objective method of determining these essential components is desired. We approach the problem of image end-member determination objectively by using the inherent variance of the data. Unlike purely statistical methods such as factor analysis, this approach derives solutions that conform to a physically realistic model.

Monte Carlo simulation of semiconductor detector response to (222)Rn and (220)Rn environments.

PubMed

Irlinger, J; Trinkl, S; Wielunksi, M; Tschiersch, J; Rühm, W

2016-07-01

A new electronic radon/thoron monitor employing semiconductor detectors based on a passive diffusion chamber design has been recently developed at the Helmholtz Zentrum München (HMGU). This device allows for acquisition of alpha particle energy spectra, in order to distinguish alpha particles originating from radon and radon progeny decays, as well as those originating from thoron and its progeny decays. A Monte-Carlo application is described which uses the Geant4 toolkit to simulate these alpha particle spectra. Reasonable agreement between measured and simulated spectra were obtained for both (220)Rn and (222)Rn, in the energy range between 1 and 10 MeV. Measured calibration factors could be reproduced by the simulation, given the uncertainties involved in the measurement and simulation. The simulated alpha particle spectra can now be used to interpret spectra measured in mixed radon/thoron atmospheres. The results agreed well with measurements performed in both radon and thoron gas environments. It is concluded that the developed simulation allows for an accurate prediction of calibration factors and alpha particle energy spectra. Copyright © 2016 Elsevier Ltd. All rights reserved.

Bandwidth efficient channel estimation method for airborne hyperspectral data transmission in sparse doubly selective communication channels

NASA Astrophysics Data System (ADS)

Vahidi, Vahid; Saberinia, Ebrahim; Regentova, Emma E.

2017-10-01

A channel estimation (CE) method based on compressed sensing (CS) is proposed to estimate the sparse and doubly selective (DS) channel for hyperspectral image transmission from unmanned aircraft vehicles to ground stations. The proposed method contains three steps: (1) the priori estimate of the channel by orthogonal matching pursuit (OMP), (2) calculation of the linear minimum mean square error (LMMSE) estimate of the received pilots given the estimated channel, and (3) estimate of the complex amplitudes and Doppler shifts of the channel using the enhanced received pilot data applying a second round of a CS algorithm. The proposed method is named DS-LMMSE-OMP, and its performance is evaluated by simulating transmission of AVIRIS hyperspectral data via the communication channel and assessing their fidelity for the automated analysis after demodulation. The performance of the DS-LMMSE-OMP approach is compared with that of two other state-of-the-art CE methods. The simulation results exhibit up to 8-dB figure of merit in the bit error rate and 50% improvement in the hyperspectral image classification accuracy.

Visible-Near Infrared Imaging Spectrometer Data of Explosion Craters

NASA Technical Reports Server (NTRS)

Farr, T. G.

2005-01-01

In a continuing study to capture a realistic terrain applicable to studies of cratering processes and landing hazards on Mars, we have obtained new high resolution visible-near infrared images of several explosion craters at the Nevada Test Site. We used the Airborne Visible-Infrared Imaging Spectrometer (AVIRIS) to obtain images in 224 spectral bands from 0.4-2.5 microns [1]. The main craters that were imaged were Sedan, Scooter, Schooner, Buggy, and Danny Boy [2]. The 390 m diameter Sedan crater, located on Yucca Flat, is the largest and freshest explosion crater on Earth that was formed under conditions similar to hypervelocity impact cratering. As such, it is effectively pristine, having been formed in 1962 as a result of the detonation of a 104 kiloton thermonuclear device, buried at the appropriate equivalent depth of burst required to make a "simple" crater [2]. Sedan was formed in alluvium of mixed lithology [3] and subsequently studied using a variety of field-based methods. Nearby secondary craters were also formed at the time and were also imaged by AVIRIS. Adjacent to Sedan and also in alluvium is Scooter, about 90 m in diameter and formed by a high-explosive event. Schooner (240 m) and Danny Boy (80 m, Fig. 1) craters were also important targets for AVIRIS as they were excavated in hard welded tuff and basaltic andesite, respectively [3, 4]. This variation in targets will allow the study of ejecta patterns, compositional modifications due to the explosions, and the role of craters as subsurface probes.

Using AVIRIS for in-flight calibration of the spectral shifts of SPOT-HRV and of AVHRR?

NASA Technical Reports Server (NTRS)

Willart-Soufflet, Veronique; Santer, Richard

1993-01-01

The response of a satellite sensor varies during its lifetime; internal calibration devices can be used to follow the sensor degradation or in-flight calibrations are conducted from estimates of the radiance at satellite level for well predictable situations. Changes in gain are evaluated assuming that the spectral response of the sensor is stable with time; i.e., that the filter response as well as the optics or the electronics are not modified since the prelaunch determinations. Nevertheless, there is some evidence that the SPOT interferometer filters are affected by outgassing effects during the launch. Tests in vacuum chambers indicated a narrowing of the filters with a shift of the upper side towards the blue of about 10 nm which is more over consistant with the loss of gain observed during the launch. Also, during the lifetime of SPOT, the relationship between the loss of sensitivity and the filter bandwidth may correspond to this effect. On the other hand, the inconsistancy of the NOAA7 calibration between two methods (desert and ocean) having a different spectral sensitivity may indicate a spectral problem with a shift of the central wavelength of -20 nm. The basic idea here is to take advantage of the good spectral definition of AVIRIS to monitor these potential spectral degradations with an experimental opportunity provided by a field campaign held in La Crau (S.E. of France) in June 1991 which associated ground-based measurements and AVIRIS, SPOT2, NOAA-11 overpasses over both the calibration site of La Crau and an agricultural area.

AVIRIS Land-Surface Mapping in Support of the Boreal Ecosystem-Atmosphere Study (BOREAS)

NASA Technical Reports Server (NTRS)

Roberts, Dar A.; Gamon, John; Keightley, Keir; Prentiss, Dylan; Reith, Ernest; Green, Robert

2001-01-01

A key scientific objective of the original Boreal Ecosystem-Atmospheric Study (BOREAS) field campaign (1993-1996) was to obtain the baseline data required for modeling and predicting fluxes of energy, mass, and trace gases in the boreal forest biome. These data sets are necessary to determine the sensitivity of the boreal forest biome to potential climatic changes and potential biophysical feedbacks on climate. A considerable volume of remotely-sensed and supporting field data were acquired by numerous researchers to meet this objective. By design, remote sensing and modeling were considered critical components for scaling efforts, extending point measurements from flux towers and field sites over larger spatial and longer temporal scales. A major focus of the BOREAS follow-on program is concerned with integrating the diverse remotely sensed and ground-based data sets to address specific questions such as carbon dynamics at local to regional scales. The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) has the potential of contributing to BOREAS through: (1) accurate retrieved apparent surface reflectance; (2) improved landcover classification; and (3) direct assessment of biochemical/biophysical information such as canopy liquid water and chlorophyll concentration through pigment fits. In this paper, we present initial products for major flux tower sites including: (1) surface reflectance of dominant cover types; (2) a land-cover classification developed using spectral mixture analysis (SMA) and Multiple Endmember Spectral Mixture Analysis (MESMA); and (3) liquid water maps. Our goal is to compare these land-cover maps to existing maps and to incorporate AVIRIS image products into models of photosynthetic flux.

AVIRIS Land-Surface Mapping in Support of the Boreal Ecosystem-Atmosphere Study

NASA Technical Reports Server (NTRS)

Green, R.; Roberts, D.; Gamon, J.; Keightley, K.; Prentiss, D.; Reith, E.

2000-01-01

A key scientific objective of the original BOREAS field campaign (1993-1996) was to obtain the baseline data required for modeling and predicting fluxes of energy, mass and trace gases in the boreal forest biome.

Mapping changing distributions of dominant species in oil-contaminated salt marshes of Louisiana using imaging spectroscopy

USGS Publications Warehouse

Beland, Michael; Roberts, Dar A.; Peterson, Seth H.; Biggs, Trent W.; Kokaly, Raymond F.; Piazza, Sarai; Roth, Keely L.; Khanna, Shruti; Ustin, Susan L.

2016-01-01

The April 2010 Deepwater Horizon (DWH) oil spill was the largest coastal spill in U.S. history. Monitoring subsequent change in marsh plant community distributions is critical to assess ecosystem impacts and to establish future coastal management priorities. Strategically deployed airborne imaging spectrometers, like the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), offer the spectral and spatial resolution needed to differentiate plant species. However, obtaining satisfactory and consistent classification accuracies over time is a major challenge, particularly in dynamic intertidal landscapes.Here, we develop and evaluate an image classification system for a time series of AVIRIS data for mapping dominant species in a heavily oiled salt marsh ecosystem. Using field-referenced image endmembers and canonical discriminant analysis (CDA), we classified 21 AVIRIS images acquired during the fall of 2010, 2011 and 2012. Classification results were evaluated using ground surveys that were conducted contemporaneously to AVIRIS collection dates. We analyzed changes in dominant species cover from 2010 to 2012 for oiled and non-oiled shorelines.CDA discriminated dominant species with a high level of accuracy (overall accuracy = 82%, kappa = 0.78) and consistency over three imaging dates (overall2010 = 82%, overall2011 = 82%, overall2012 = 88%). Marshes dominated by Spartina alterniflora were the most spatially abundant in shoreline zones (≤ 28 m from shore) for all three dates (2010 = 79%, 2011 = 61%, 2012 = 63%), followed by Juncus roemerianus (2010 = 11%, 2011 = 19%, 2012 = 17%) and Distichlis spicata (2010 = 4%, 2011 = 10%, 2012 = 7%).Marshes that were heavily contaminated with oil exhibited variable responses from 2010 to 2012. Marsh vegetation classes converted to a subtidal, open water class along oiled and non-oiled shorelines that were similarly situated in the landscape. However, marsh loss along oil-contaminated shorelines doubled that of non-oiled shorelines. Only S. alterniflora dominated marshes were extensively degraded, losing 15% (354,604 m2) cover in oiled shoreline zones, suggesting that S. alterniflora marshes may be more vulnerable to shoreline erosion following hydrocarbon stress, due to their landscape position.

Modeling grain size variations of aeolian gypsum deposits at White Sands, New Mexico, using AVIRIS imagery

USGS Publications Warehouse

Ghrefat, H.A.; Goodell, P.C.; Hubbard, B.E.; Langford, R.P.; Aldouri, R.E.

2007-01-01

Visible and Near-Infrared (VNIR) through Short Wavelength Infrared (SWIR) (0.4-2.5????m) AVIRIS data, along with laboratory spectral measurements and analyses of field samples, were used to characterize grain size variations in aeolian gypsum deposits across barchan-transverse, parabolic, and barchan dunes at White Sands, New Mexico, USA. All field samples contained a mineralogy of ?????100% gypsum. In order to document grain size variations at White Sands, surficial gypsum samples were collected along three Transects parallel to the prevailing downwind direction. Grain size analyses were carried out on the samples by sieving them into seven size fractions ranging from 45 to 621????m, which were subjected to spectral measurements. Absorption band depths of the size fractions were determined after applying an automated continuum-removal procedure to each spectrum. Then, the relationship between absorption band depth and gypsum size fraction was established using a linear regression. Three software processing steps were carried out to measure the grain size variations of gypsum in the Dune Area using AVIRIS data. AVIRIS mapping results, field work and laboratory analysis all show that the interdune areas have lower absorption band depth values and consist of finer grained gypsum deposits. In contrast, the dune crest areas have higher absorption band depth values and consist of coarser grained gypsum deposits. Based on laboratory estimates, a representative barchan-transverse dune (Transect 1) has a mean grain size of 1.16 ??{symbol} (449????m). The error bar results show that the error ranges from - 50 to + 50????m. Mean grain size for a representative parabolic dune (Transect 2) is 1.51 ??{symbol} (352????m), and 1.52 ??{symbol} (347????m) for a representative barchan dune (Transect 3). T-test results confirm that there are differences in the grain size distributions between barchan and parabolic dunes and between interdune and dune crest areas. The t-test results also show that there are no significant differences between modeled and laboratory-measured grain size values. Hyperspectral grain size modeling can help to determine dynamic processes shaping the formation of the dunes such as wind directions, and the relative strengths of winds through time. This has implications for studying such processes on other planetary landforms that have mineralogy with unique absorption bands in VNIR-SWIR hyperspectral data. ?? 2006 Elsevier B.V. All rights reserved.

Comparision of Bathymetry and Bottom Characteristics From Hyperspectral Remote Sensing Data and Shipborne Acoustic Measurements

NASA Astrophysics Data System (ADS)

McIntyre, M. L.; Naar, D. F.; Carder, K. L.; Howd, P. A.; Lewis, J. M.; Donahue, B. T.; Chen, F. R.

2002-12-01

There is growing interest in applying optical remote sensing techniques to shallow-water geological applications such as bathymetry and bottom characterization. Model inversions of hyperspectral remote-sensing reflectance imagery can provide estimates of bottom albedo and depth. This research was conducted in support of the HyCODE (Hyperspectral Coupled Ocean Dynamics Experiment) project in order to test optical sensor performance and the use of a hyperspectral remote-sensing reflectance algorithm for shallow waters in estimating bottom depths and reflectance. The objective of this project was to compare optically derived products of bottom depths and reflectance to shipborne acoustic measurements of bathymetry and backscatter. A set of three high-resolution, multibeam surveys within an 18 km by 1.5 km shore-perpendicular transect 5 km offshore of Sarasota, Florida were collected at water depths ranging from 8 m to 16 m. These products are compared to bottom depths derived from aircraft remote-sensing data collected with the AVIRIS (Airborne Visible-Infrared Imaging Spectrometer) instrument data by means of a semi-analytical remote sensing reflectance model. The pixel size of the multibeam bathymetry and AVIRIS data are 0.25 m and 10 m, respectively. When viewed at full resolution, the multibeam bathymetry data show small-scale sedimentary bedforms (wavelength ~10m, amplitude ~1m) that are not observed in the lower resolution hyperspectral bathymetry. However, model-derived bottom depths agree well with a smoothed version of the multibeam bathymetry. Depths derived from shipborne hyperspectral measurements were accurate within 13%. In areas where diver observations confirmed biological growth and bioturbation, derived bottom depths were less accurate. Acoustic backscatter corresponds well with the aircraft hyperspectral imagery and in situ measurements of bottom reflectance. Acoustic backscatter was used to define the distribution of different bottom types. Acoustic backscatter imagery corresponds well with the AVIRIS data in the middle to outer study area, implying a close correspondence between seafloor character and optical reflectance. AVIRIS data in the inner study area show poorer correspondence with the acoustic facies, indicating greater water column effects (turbidity). Acoustic backscatter as a proxy for bottom albedo, in conjunction with multibeam bathymetry data, will allow for more precise modeling of the optical signal in coastal environments.

Causal correlation of foliar biochemical concentrations with AVIRIS spectra using forced entry linear regression

NASA Technical Reports Server (NTRS)

Dawson, Terence P.; Curran, Paul J.; Kupiec, John A.

1995-01-01

A major goal of airborne imaging spectrometry is to estimate the biochemical composition of vegetation canopies from reflectance spectra. Remotely-sensed estimates of foliar biochemical concentrations of forests would provide valuable indicators of ecosystem function at regional and eventually global scales. Empirical research has shown a relationship exists between the amount of radiation reflected from absorption features and the concentration of given biochemicals in leaves and canopies (Matson et al., 1994, Johnson et al., 1994). A technique commonly used to determine which wavelengths have the strongest correlation with the biochemical of interest is unguided (stepwise) multiple regression. Wavelengths are entered into a multivariate regression equation, in their order of importance, each contributing to the reduction of the variance in the measured biochemical concentration. A significant problem with the use of stepwise regression for determining the correlation between biochemical concentration and spectra is that of 'overfitting' as there are significantly more wavebands than biochemical measurements. This could result in the selection of wavebands which may be more accurately attributable to noise or canopy effects. In addition, there is a real problem of collinearity in that the individual biochemical concentrations may covary. A strong correlation between the reflectance at a given wavelength and the concentration of a biochemical of interest, therefore, may be due to the effect of another biochemical which is closely related. Furthermore, it is not always possible to account for potentially suitable waveband omissions in the stepwise selection procedure. This concern about the suitability of stepwise regression has been identified and acknowledged in a number of recent studies (Wessman et al., 1988, Curran, 1989, Curran et al., 1992, Peterson and Hubbard, 1992, Martine and Aber, 1994, Kupiec, 1994). These studies have pointed to the lack of a physical link between wavelengths chosen by stepwise regression and the biochemical of interest, and this in turn has cast doubts on the use of imaging spectrometry for the estimation of foliar biochemical concentrations at sites distant from the training sites. To investigate this problem, an analysis was conducted on the variation in canopy biochemical concentrations and reflectance spectra using forced entry linear regression.

Spectral identification of minerals using imaging spectrometry data: Evaluating the effects of signal to noise and spectral resolution using the tricorder algorithm

NASA Technical Reports Server (NTRS)

Swayze, Gregg A.; Clark, Roger N.

1995-01-01

The rapid development of sophisticated imaging spectrometers and resulting flood of imaging spectrometry data has prompted a rapid parallel development of spectral-information extraction technology. Even though these extraction techniques have evolved along different lines (band-shape fitting, endmember unmixing, near-infrared analysis, neural-network fitting, and expert systems to name a few), all are limited by the spectrometer's signal to noise (S/N) and spectral resolution in producing useful information. This study grew from a need to quantitatively determine what effects these parameters have on our ability to differentiate between mineral absorption features using a band-shape fitting algorithm. We chose to evaluate the AVIRIS, HYDICE, MIVIS, GERIS, VIMS, NIMS, and ASTER instruments because they collect data over wide S/N and spectral-resolution ranges. The study evaluates the performance of the Tricorder algorithm, in differentiating between mineral spectra in the 0.4-2.5 micrometer spectral region. The strength of the Tricorder algorithm is in its ability to produce an easily understood comparison of band shape that can concentrate on small relevant portions of the spectra, giving it an advantage over most unmixing schemes, and in that it need not spend large amounts of time reoptimizing each time a new mineral component is added to its reference library, as is the case with neural-network schemes. We believe the flexibility of the Tricorder algorithm is unparalleled among spectral-extraction techniques and that the results from this study, although dealing with minerals, will have direct applications to spectral identification in other disciplines.

Onboard autonomous mineral detectors for Mars rovers

NASA Astrophysics Data System (ADS)

Gilmore, M. S.; Bornstein, B.; Castano, R.; Merrill, M.; Greenwood, J.

2005-12-01

Mars rovers and orbiters currently collect far more data than can be downlinked to Earth, which reduces mission science return; this problem will be exacerbated by future rovers of enhanced capabilities and lifetimes. We are developing onboard intelligence sufficient to extract geologically meaningful data from spectrometer measurements of soil and rock samples, and thus to guide the selection, measurement and return of these data from significant targets at Mars. Here we report on techniques to construct mineral detectors capable of running on current and future rover and orbital hardware. We focus on carbonate and sulfate minerals which are of particular geologic importance because they can signal the presence of water and possibly life. Sulfates have also been discovered at the Eagle and Endurance craters in Meridiani Planum by the Mars Exploration Rover (MER) Opportunity and at other regions on Mars by the OMEGA instrument aboard Mars Express. We have developed highly accurate artificial neural network (ANN) and Support Vector Machine (SVM) based detectors capable of identifying calcite (CaCO3) and jarosite (KFe3(SO4)2(OH)6) in the visible/NIR (350-2500 nm) spectra of both laboratory specimens and rocks in Mars analogue field environments. To train the detectors, we used a generative model to create 1000s of linear mixtures of library end-member spectra in geologically realistic percentages. We have also augmented the model to include nonlinear mixing based on Hapke's models of bidirectional reflectance spectroscopy. Both detectors perform well on the spectra of real rocks that contain intimate mixtures of minerals, rocks in natural field environments, calcite covered by Mars analogue dust, and AVIRIS hyperspectral cubes. We will discuss the comparison of ANN and SVM classifiers for this task, technical challenges (weathering rinds, atmospheric compositions, and computational complexity), and plans for integration of these detectors into both the Coupled Layer Architecture for Robotic Autonomy (CLARAty) system and the Onboard Autonomous Science Investigation System (OASIS) at JPL.

Unfolding neutron spectra from simulated response of thermoluminescence dosimeters inside a polyethylene sphere using GRNN neural network

NASA Astrophysics Data System (ADS)

Lotfalizadeh, F.; Faghihi, R.; Bahadorzadeh, B.; Sina, S.

2017-07-01

Neutron spectrometry using a single-sphere containing dosimeters has been developed recently, as an effective replacement for Bonner sphere spectrometry. The aim of this study is unfolding the neutron energy spectra using GRNN artificial neural network, from the response of thermoluminescence dosimeters, TLDs, located inside a polyethylene sphere. The spectrometer was simulated using MCNP5. TLD-600 and TLD-700 dosimeters were simulated at different positions in all directions. Then the GRNN was used for neutron spectra prediction, using the TLDs' readings. Comparison of spectra predicted by the network with the real spectra, show that the single-sphere dosimeter is an effective instrument in unfolding neutron spectra.

The Use of Remote Sensing to Resolve the Aerosol Radiative Forcing

NASA Technical Reports Server (NTRS)

Kaufman, Y. J.; Tanre, D.; Remer, Lorraine

1999-01-01

Satellites are used for remote sensing of aerosol optical thickness and optical properties in order to derive the aerosol direct and indirect radiative forcing of climate. Accuracy of the derived aerosol optical thickness is used as a measure of the accuracy in deriving the aerosol radiative forcing. Several questions can be asked to challenge this concept. Is the accuracy of the satellite-derived aerosol direct forcing limited to the accuracy of the measured optical thickness? What are the spectral bands needed to derive the total aerosol forcing? Does most of the direct or indirect aerosol forcing of climate originate from regions with aerosol concentrations that are high enough to be detected from space? What should be the synergism ground-based and space-borne remote sensing to solve the problem? We shall try to answer some of these questions, using AVIRIS airborne measurements and simulations.

Quality evaluation of pansharpened hyperspectral images generated using multispectral images

NASA Astrophysics Data System (ADS)

Matsuoka, Masayuki; Yoshioka, Hiroki

2012-11-01

Hyperspectral remote sensing can provide a smooth spectral curve of a target by using a set of higher spectral resolution detectors. The spatial resolution of the hyperspectral images, however, is generally much lower than that of multispectral images due to the lower energy of incident radiation. Pansharpening is an image-fusion technique that generates higher spatial resolution multispectral images by combining lower resolution multispectral images with higher resolution panchromatic images. In this study, higher resolution hyperspectral images were generated by pansharpening of simulated lower hyperspectral and higher multispectral data. Spectral and spatial qualities of pansharpened images, then, were accessed in relation to the spectral bands of multispectral images. Airborne hyperspectral data of AVIRIS was used in this study, and it was pansharpened using six methods. Quantitative evaluations of pansharpened image are achieved using two frequently used indices, ERGAS, and the Q index.

Modeling and Prediction of Wildfire Hazard in Southern California, Integration of Models with Imaging Spectrometry

NASA Technical Reports Server (NTRS)

Roberts, Dar A.; Church, Richard; Ustin, Susan L.; Brass, James A. (Technical Monitor)

2001-01-01

Large urban wildfires throughout southern California have caused billions of dollars of damage and significant loss of life over the last few decades. Rapid urban growth along the wildland interface, high fuel loads and a potential increase in the frequency of large fires due to climatic change suggest that the problem will worsen in the future. Improved fire spread prediction and reduced uncertainty in assessing fire hazard would be significant, both economically and socially. Current problems in the modeling of fire spread include the role of plant community differences, spatial heterogeneity in fuels and spatio-temporal changes in fuels. In this research, we evaluated the potential of Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and Airborne Synthetic Aperture Radar (AIRSAR) data for providing improved maps of wildfire fuel properties. Analysis concentrated in two areas of Southern California, the Santa Monica Mountains and Santa Barbara Front Range. Wildfire fuel information can be divided into four basic categories: fuel type, fuel load (live green and woody biomass), fuel moisture and fuel condition (live vs senesced fuels). To map fuel type, AVIRIS data were used to map vegetation species using Multiple Endmember Spectral Mixture Analysis (MESMA) and Binary Decision Trees. Green live biomass and canopy moisture were mapped using AVIRIS through analysis of the 980 nm liquid water absorption feature and compared to alternate measures of moisture and field measurements. Woody biomass was mapped using L and P band cross polarimetric data acquired in 1998 and 1999. Fuel condition was mapped using spectral mixture analysis to map green vegetation (green leaves), nonphotosynthetic vegetation (NPV; stems, wood and litter), shade and soil. Summaries describing the potential of hyperspectral and SAR data for fuel mapping are provided by Roberts et al. and Dennison et al. To utilize remotely sensed data to assess fire hazard, fuel-type maps were translated into standard fuel models accessible to the FARSITE fire spread simulator. The FARSITE model and BEHAVE are considered industry standards for fire behavior analysis. Anderson level fuels map, generated using a binary decision tree classifier are available for multiple dates in the Santa Monica Mountains and at least one date for Santa Barbara. Fuel maps that will fill in the areas between Santa Barbara and the Santa Monica Mountains study sites are in progress, as part of a NASA Regional Earth Science Application Center, the Southern California Wildfire Hazard Center. Species-level maps, were supplied to fire managing agencies (Los Angeles County Fire, California Department of Forestry). Research results were published extensively in the refereed and non-refereed literature. Educational outreach included funding of several graduate students, undergraduate intern training and an article featured in the California Alliance for Minorities Program (CAMP) Quarterly Journal.

USGS Spectral Library Version 7

USGS Publications Warehouse

Kokaly, Raymond F.; Clark, Roger N.; Swayze, Gregg A.; Livo, K. Eric; Hoefen, Todd M.; Pearson, Neil C.; Wise, Richard A.; Benzel, William M.; Lowers, Heather A.; Driscoll, Rhonda L.; Klein, Anna J.

2017-04-10

We have assembled a library of spectra measured with laboratory, field, and airborne spectrometers. The instruments used cover wavelengths from the ultraviolet to the far infrared (0.2 to 200 microns [μm]). Laboratory samples of specific minerals, plants, chemical compounds, and manmade materials were measured. In many cases, samples were purified, so that unique spectral features of a material can be related to its chemical structure. These spectro-chemical links are important for interpreting remotely sensed data collected in the field or from an aircraft or spacecraft. This library also contains physically constructed as well as mathematically computed mixtures. Four different spectrometer types were used to measure spectra in the library: (1) Beckman™ 5270 covering the spectral range 0.2 to 3 µm, (2) standard, high resolution (hi-res), and high-resolution Next Generation (hi-resNG) models of Analytical Spectral Devices (ASD) field portable spectrometers covering the range from 0.35 to 2.5 µm, (3) Nicolet™ Fourier Transform Infra-Red (FTIR) interferometer spectrometers covering the range from about 1.12 to 216 µm, and (4) the NASA Airborne Visible/Infra-Red Imaging Spectrometer AVIRIS, covering the range 0.37 to 2.5 µm. Measurements of rocks, soils, and natural mixtures of minerals were made in laboratory and field settings. Spectra of plant components and vegetation plots, comprising many plant types and species with varying backgrounds, are also in this library. Measurements by airborne spectrometers are included for forested vegetation plots, in which the trees are too tall for measurement by a field spectrometer. This report describes the instruments used, the organization of materials into chapters, metadata descriptions of spectra and samples, and possible artifacts in the spectral measurements. To facilitate greater application of the spectra, the library has also been convolved to selected spectrometer and imaging spectrometers sampling and bandpasses, and resampled to selected broadband multispectral sensors. The native file format of the library is the SPECtrum Processing Routines (SPECPR) data format. This report describes how to access freely available software to read the SPECPR format. To facilitate broader access to the library, we produced generic formats of the spectra and metadata in text files. The library is provided on digital media and online at https://speclab.cr.usgs.gov/spectral-lib.html. A long-term archive of these data are stored on the USGS ScienceBase data server (https://dx.doi.org/10.5066/F7RR1WDJ).

Simulated infrared emission spectra of highly excited polyatomic molecules: a detailed model of the PAH-UIR hypothesis

NASA Technical Reports Server (NTRS)

Cook, D. J.; Saykally, R. J.

1998-01-01

A detailed description of the polycyclic aromatic hydrocarbon (PAH)/unidentified infrared band (UIR) mechanism is presented in which experimental spectral bandshape functions are used to simulate IR emission spectra for individual molecules. These spectra are additively superimposed to produce a conglomerate spectrum representative of a family of PAH molecules. Ab initio vibrational frequencies and intensities for nine PAHs (neutral and cationic) as large as ovalene are used in conjunction with measured bandshape and temperature-dependent redshift data to simulate the UIR bands. The calculated spectra of cations provide a closer match to the UIRs than do those of the neutrals. However, the PAH cations used in the simulations fail to reproduce the details of the UIR emission spectra. The discrepancies are potentially alleviated if both larger PAHs and a greater number of PAHs were included in the simulation.

DXRaySMCS: a user-friendly interface developed for prediction of diagnostic radiology X-ray spectra produced by Monte Carlo (MCNP-4C) simulation.

PubMed

Bahreyni Toossi, M T; Moradi, H; Zare, H

2008-01-01

In this work, the general purpose Monte Carlo N-particle radiation transport computer code (MCNP-4C) was used for the simulation of X-ray spectra in diagnostic radiology. The electron's path in the target was followed until its energy was reduced to 10 keV. A user-friendly interface named 'diagnostic X-ray spectra by Monte Carlo simulation (DXRaySMCS)' was developed to facilitate the application of MCNP-4C code for diagnostic radiology spectrum prediction. The program provides a user-friendly interface for: (i) modifying the MCNP input file, (ii) launching the MCNP program to simulate electron and photon transport and (iii) processing the MCNP output file to yield a summary of the results (relative photon number per energy bin). In this article, the development and characteristics of DXRaySMCS are outlined. As part of the validation process, output spectra for 46 diagnostic radiology system settings produced by DXRaySMCS were compared with the corresponding IPEM78. Generally, there is a good agreement between the two sets of spectra. No statistically significant differences have been observed between IPEM78 reported spectra and the simulated spectra generated in this study.

The Effects of Surface Properties and Albedo on Methane Retrievals with the Airborne Visible/Infrared Imaging Spectrometer Next Generation (AVIRIS-NG)

NASA Astrophysics Data System (ADS)

Ayasse, A.; Thorpe, A. K.; Roberts, D. A.

2017-12-01

Atmospheric methane has increased by a factor of 2.5 since the beginning of the industrial era in response to anthropogenic emissions (Ciais et al., 2013). Although it is less abundant than carbon dioxide it is 86 time more potent on a 20 year time scale (Myhre et al., 2013) and is therefore responsible for about 20% of the total global warming induced by anthropogenic greenhouse gasses (Kirschke et al., 2013). Given the importance of methane to global climate change, monitoring and measuring methane emissions using techniques such as remote sensing is of increasing interest. Recently the Airborne Visible-Infrared Imaging Spectrometer - Next Generation (AVIRIS-NG) has proven to be a valuable instrument for quantitative mapping of methane plumes (Frankenberg et al., 2016; Thorpe et al., 2016; Thompson et al., 2015). In this study, we applied the Iterative Maximum a Posterior Differential Optical Spectroscopy (IMAP-DOAS) methane retrieval algorithm to a synthetic image with variable methane concentrations, albedo, and land cover. This allowed for characterizing retrieval performance, including potential sensitivity to variable land cover, low albedo surfaces, and surfaces known to cause spurious signals. We conclude that albedo had little influence on the IMAP-DOAS results except at very low radiance levels. Water (without sun glint) was found to be the most challenging surface for methane retrievals while hydrocarbons and some green vegetation also caused error. Understanding the effect of surface properties on methane retrievals is important given the increased use of AVIRIS-NG to map gas plumes over diverse locations and methane sources. This analysis could be expanded to include additional gas species like carbon dioxide and to further investigate gas sensitivity of proposed instruments for dedicated gas mapping from airborne and spaceborne platforms.

Comparative mineral mapping in the Colorado Mineral Belt using AVIRIS and ASTER remote sensing data

USGS Publications Warehouse

Rockwell, Barnaby W.

2013-01-01

This report presents results of interpretation of spectral remote sensing data covering the eastern Colorado Mineral Belt in central Colorado, USA, acquired by the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) sensors. This study was part of a multidisciplinary mapping and data integration project at the U.S. Geological Survey that focused on long-term resource planning by land-managing entities in Colorado. The map products were designed primarily for the regional mapping and characterization of exposed surface mineralogy, including that related to hydrothermal alteration and supergene weathering of pyritic rocks. Alteration type was modeled from identified minerals based on standard definitions of alteration mineral assemblages. Vegetation was identified using the ASTER data and subdivided based on per-pixel chlorophyll content (depth of 0.68 micrometer absorption band) and dryness (fit and depth of leaf biochemical absorptions in the shortwave infrared spectral region). The vegetation results can be used to estimate the abundance of fire fuels at the time of data acquisition (2002 and 2003). The AVIRIS- and ASTER-derived mineral mapping results can be readily compared using the toggleable layers in the GeoPDF file, and by using the provided GIS-ready raster datasets. The results relating to mineral occurrence and distribution were an important source of data for studies documenting the effects of mining and un-mined, altered rocks on aquatic ecosystems at the watershed level. These studies demonstrated a high correlation between metal concentrations in streams and the presence of hydrothermal alteration and (or) pyritic mine waste as determined by analysis of the map products presented herein. The mineral mapping results were also used to delineate permissive areas for various mineral deposit types.

Discriminating Canopy Structural Types from Optical Properties using AVIRIS Data in the Sierra National Forest in Central California

NASA Astrophysics Data System (ADS)

Huesca Martinez, M.; Garcia, M.; Roth, K. L.; Casas, A.; Ustin, S.

2015-12-01

There is a well-established need within the remote sensing community for improved estimation of canopy structure and understanding of its influence on the retrieval of leaf biochemical properties. The aim of this project was to evaluate the estimation of structural properties directly from hyperspectral data, with the broader goal that these might be used to constrain retrievals of canopy chemistry. We used NASA's Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) to discriminate different canopy structural types, defined in terms of biomass, canopy height and vegetation complexity, and compared them to estimates of these properties measured by LiDAR data. We tested a large number of optical metrics, including single narrow band reflectance and 1st derivative, sub-pixel cover fractions, narrow-band indices, spectral absorption features, and Principal Component Analysis components. Canopy structural types were identified and classified from different forest types by integrating structural traits measured by optical metrics using the Random Forest (RF) classifier. The classification accuracy was above 70% in most of the vegetation scenarios. The best overall accuracy was achieved for hardwood forest (>80% accuracy) and the lowest accuracy was found in mixed forest (~70% accuracy). Furthermore, similarly high accuracy was found when the RF classifier was applied to a spatially independent dataset, showing significant portability for the method used. Results show that all spectral regions played a role in canopy structure assessment, thus the whole spectrum is required. Furthermore, optical metrics derived from AVIRIS proved to be a powerful technique for structural attribute mapping. This research illustrates the potential for using optical properties to distinguish several canopy structural types in different forest types, and these may be used to constrain quantitative measurements of absorbing properties in future research.

Subpixel Snow-covered Area Including Differentiated Grain Size from AVIRIS Data Over the Sierra Nevada Mountain Range

NASA Astrophysics Data System (ADS)

Hill, R.; Calvin, W. M.; Harpold, A. A.

2016-12-01

Mountain snow storage is the dominant source of water for humans and ecosystems in western North America. Consequently, the spatial distribution of snow-covered area is fundamental to both hydrological, ecological, and climate models. Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data were collected along the entire Sierra Nevada mountain range extending from north of Lake Tahoe to south of Mt. Whitney during the 2015 and 2016 snow-covered season. The AVIRIS dataset used in this experiment consists of 224 contiguous spectral channels with wavelengths ranging 400-2500 nanometers at a 15-meter spatial pixel size. Data from the Sierras were acquired on four days: 2/24/15 during a very low snow year, 3/24/16 near maximum snow accumulation, and 5/12/16 and 5/18/16 during snow ablation and snow loss. Previous retrieval of subpixel snow-covered area in alpine regions used multiple snow endmembers due to the sensitivity of snow spectral reflectance to grain size. We will present a model that analyzes multiple endmembers of varying snow grain size, vegetation, rock, and soil in segmented regions along the Sierra Nevada to determine snow-cover spatial extent, snow sub-pixel fraction and approximate grain size or melt state. The root mean squared error will provide a spectrum-wide assessment of the mixture model's goodness-of-fit. Analysis will compare snow-covered area and snow-cover depletion in the 2016 year, and annual variation from the 2015 year. Field data were also acquired on three days concurrent with the 2016 flights in the Sagehen Experimental Forest and will support ground validation of the airborne data set.

Using Multi-Temporal Imaging Spectroscopy Data to Detect Drought and Bark Beetle Related Conifer Mortality across the Central Sierra Nevada, California, USA

NASA Astrophysics Data System (ADS)

Tane, Z.; Ramirez, C.; Roberts, D. A.; Koltunov, A.; Sweeney, S.

2016-12-01

There is considerable scientific and public interest in the ongoing drought and bark beetle driven conifer mortality in the Central and Southern Sierra Nevada, the scale of which has not been seen previously in California's recorded history. Just before and during this mortality event (2013-2016), Airborne Visible / Infrared Imaging Spectrometer (AVIRIS) data were acquired seasonally over part of the affected area as part of the HyspIRI Preparatory Mission. In this study, we used 11 AVIRIS flight lines from 8 seasonal flights (from spring 2013 to summer 2015) to detect conifer mortality. In addition to the standard pre-processing completed by NASA's Jet Propulsion Lab, AVIRIS images were co-registered and georeferenced between time steps and images were resampled to the spatial resolution and signal-to-noise ratio expected from the proposed HyspIRI satellite. We used summer 2015 high-spatial resolution WorldView-2 and WorldView-3 images from across the study area to collect training data from five scenes, and independent validation data from five additional scenes. A cover class map developed with a machine-learning algorithm, separated pixels into green conifer, red-attack conifer, and non-conifer dominant cover, yielding a high accuracy (above 85% accuracy on the independent validation data) in the tree mortality final map. Discussion will include the effects of temporal information and input dimensionality on classification accuracy, comparison with multi-spectral classification accuracy, the ecological and forest management implications of this work, incorporating 2016 AVIRS images to detect 2016 mortality, and future work in understanding the spatial patterns underlying the mortality.

Mapping target signatures via partial unmixing of AVIRIS data

NASA Technical Reports Server (NTRS)

Boardman, Joseph W.; Kruse, Fred A.; Green, Robert O.

1995-01-01

A complete spectral unmixing of a complicated AVIRIS scene may not always be possible or even desired. High quality data of spectrally complex areas are very high dimensional and are consequently difficult to fully unravel. Partial unmixing provides a method of solving only that fraction of the data inversion problem that directly relates to the specific goals of the investigation. Many applications of imaging spectrometry can be cast in the form of the following question: 'Are my target signatures present in the scene, and if so, how much of each target material is present in each pixel?' This is a partial unmixing problem. The number of unmixing endmembers is one greater than the number of spectrally defined target materials. The one additional endmember can be thought of as the composite of all the other scene materials, or 'everything else'. Several workers have proposed partial unmixing schemes for imaging spectrometry data, but each has significant limitations for operational application. The low probability detection methods described by Farrand and Harsanyi and the foreground-background method of Smith et al are both examples of such partial unmixing strategies. The new method presented here builds on these innovative analysis concepts, combining their different positive attributes while attempting to circumvent their limitations. This new method partially unmixes AVIRIS data, mapping apparent target abundances, in the presence of an arbitrary and unknown spectrally mixed background. It permits the target materials to be present in abundances that drive significant portions of the scene covariance. Furthermore it does not require a priori knowledge of the background material spectral signatures. The challenge is to find the proper projection of the data that hides the background variance while simultaneously maximizing the variance amongst the targets.

Mapping Arid Vegetation Species Distributions in the White Mountains, Eastern California, Using AVIRIS, Topography, and Geology

NASA Technical Reports Server (NTRS)

VandeVen, C.; Weiss, S. B.

2001-01-01

Our challenge is to model plant species distributions in complex montane environments using disparate sources of data, including topography, geology, and hyperspectral data. From an ecologist's point of view, species distributions are determined by local environment and disturbance history, while spectral data are 'ancillary.' However, a remote sensor's perspective says that spectral data provide picture of what vegetation is there, topographic and geologic data are ancillary. In order to bridge the gap, all available data should be used to get the best possible prediction of species distributions using complex multivariate techniques implemented on a GIS. Vegetation reflects local climatic and nutrient conditions, both of which can be modeled, allowing predictive mapping of vegetation distributions. Geologic substrate strongly affects chemical, thermal, and physical properties of soils, while climatic conditions are determined by local topography. As elevation increases, precipitation increases and temperature decreases. Aspect, slope, and surrounding topography determine potential insolation, so that south-facing slopes are warmer and north-facing slopes cooler at a given elevation. Topographic position (ridge, slope, canyon, or meadow) and slope angle affect sediment accumulation and soil depth. These factors combine as complex environmental gradients, and underlie many features of plant distributions. Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data, digital elevation models, digitized geologic maps, and 378 ground control points were used to predictively map species distributions in the central and southern White Mountains, along the western boundary of the Basin and Range province. Minimum Noise Fraction (MNF) bands were calculated from the visible and near-infrared AVIRIS bands, and combined with digitized geologic maps and topographic variables using Canonical Correspondence Analysis (CCA). CCA allows for modeling species 'envelopes' in multidimensional environmental space, which can then be projected across entire landscapes.

Seasonal and Inter-Annual Patterns of Chlorophyll and Phytoplankton Community Structure in Monterey Bay, CA Derived from AVIRIS Data During the 2013-2015 HyspIRI Airborne Campaign

NASA Astrophysics Data System (ADS)

Palacios, S. L.; Thompson, D. R.; Kudela, R. M.; Negrey, K.; Guild, L. S.; Gao, B. C.; Green, R. O.; Torres-Perez, J. L.

2016-02-01

There is a need in the ocean color community to discriminate among phytoplankton groups within the bulk chlorophyll pool to understand ocean biodiversity, track energy flow through ecosystems, and identify and monitor for harmful algal blooms. Imaging spectrometer measurements enable the use of sophisticated spectroscopic algorithms for applications such as differentiating among coral species and discriminating phytoplankton taxa. These advanced algorithms rely on the fine scale, subtle spectral shape of the atmospherically corrected remote sensing reflectance (Rrs) spectrum of the ocean surface. Consequently, these algorithms are sensitive to inaccuracies in the retrieved Rrs spectrum that may be related to the presence of nearby clouds, inadequate sensor calibration, low sensor signal-to-noise ratio, glint correction, and atmospheric correction. For the HyspIRI Airborne Campaign, flight planning considered optimal weather conditions to avoid flights with significant cloud/fog cover. Although best suited for terrestrial targets, the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) has enough signal for some coastal chlorophyll algorithms and meets sufficient calibration requirements for most channels. The coastal marine environment has special atmospheric correction needs due to error introduced by aerosols and terrestrially sourced atmospheric dust and riverine sediment plumes. For this HyspIRI campaign, careful attention has been given to the correction of AVIRIS imagery of the Monterey Bay to optimize ocean Rrs retrievals to estimate chlorophyll (OC3) and phytoplankton functional type (PHYDOTax) data products. This new correction method has been applied to several image collection dates during two oceanographic seasons in 2013 and 2014. These two periods are dominated by either diatom blooms or red tides. Results to be presented include chlorophyll and phytoplankton community structure and in-water validation data for these dates during the two seasons.

Atmospheric correction of AVIRIS data in ocean waters

NASA Technical Reports Server (NTRS)

Terrie, Gregory; Arnone, Robert

1992-01-01

Hyperspectral data offers unique capabilities for characterizing the ocean environment. The spectral characterization of the composition of ocean waters can be organized into biological and terrigenous components. Biological photosynthetic pigments in ocean waters have unique spectral ocean color signatures which can be associated with different biological species. Additionally, suspended sediment has different scattering coefficients which result in ocean color signatures. Measuring the spatial distributions of these components in the maritime environments provides important tools for understanding and monitoring the ocean environment. These tools have significant applications in pollution, carbon cycle, current and water mass detection, location of fronts and eddies, sewage discharge and fate etc. Ocean color was used from satellite for describing the spatial variability of chlorophyll, water clarity (K(sub 490)), suspended sediment concentration, currents etc. Additionally, with improved atmospheric correction methods, ocean color results produced global products of spectral water leaving radiance (L(sub W)). Ocean color results clearly indicated strong applications for characterizing the spatial and temporal variability of bio-optical oceanography. These studies were largely the results of advanced atmospheric correction techniques applied to multispectral imagery. The atmosphere contributes approximately 80 percent - 90 percent of the satellite received radiance in the blue-green portion of the spectrum. In deep ocean waters, maximum transmission of visible radiance is achieved at 490nm. Conversely, nearly all of the light is absorbed by the water at wavelengths greater than about 650nm and thus appears black. These spectral ocean properties are exploited by algorithms developed for the atmospheric correction used in satellite ocean color processing. The objective was to apply atmospheric correction techniques that were used for procesing satellite Coastal Zone Color Scanner (CZCS) data to AVIRIS data. Quantitative measures of L(sub W) from AVIRIS are compared with ship ground truth data and input into bio-optical models.

Nutrient Stress Detection in Corn, Using Neural Networks and AVIRIS Hyperspectral Imagery

NASA Technical Reports Server (NTRS)

Estep, Lee; Davis, Bruce

2001-01-01

The US Department of Agriculture (USDA) Agricultural Research Service (ARS) Variable Rate (VRAT) Nitrogen Application site in Shelton, Nebraska, represents a well-documented, corn-growing quarter section. The USDA VRAT site is used to systematically study nutrient stress in corn by varying sub-plot application of fertilizer. The field has four replicates of five blocks that vary by nitrogen treatment from 0-kg/ha to 200-kg/ha in 50-kg/ha increments. The treatment blocks are set out in a randomized, complete block design. Typically, the VRAT is planted in a ridge till, monoculture corn and is watered by a central pivot irrigation system on a three-day period. Since water stress can increase spectral reflectance from corn leaves, it is important that the N-application plots be adequately watered so that only nutrient-related stress will predominate. A figure shows imagery of the USDA VRAT site with the fertilizer amounts for each block shown. Low-altitude Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) hyperspectral imagery was acquired over the Shelton, Nebraska, VRAT site on July 22, 1999. The overflight produced 3-meter pixels with 224 spectral bands. Ground personnel supported the mission with measurements at the time of the overflight. The image data was pre-processed at JPL before being sent out to an investigator. The data arrived radiometrically corrected, allowing ready application of an atmospheric correction procedure. The Atmosphere Removal Program (ATREM) was used to perform an atmospheric correction. The AVIRIS imagery after ATREM correction was output as relative reflectance. This relative reflectance file was scaled by an empirical line procedure to provide reflectances that matched closely those measured in the field.

Monte Carlo simulation of reflection spectra of random multilayer media strongly scattering and absorbing light

DOE Office of Scientific and Technical Information (OSTI.GOV)

Meglinskii, I V

2001-12-31

The reflection spectra of a multilayer random medium - the human skin - strongly scattering and absorbing light are numerically simulated. The propagation of light in the medium and the absorption spectra are simulated by the stochastic Monte Carlo method, which combines schemes for calculations of real photon trajectories and the statistical weight method. The model takes into account the inhomogeneous spatial distribution of blood vessels, water, and melanin, the degree of blood oxygenation, and the hematocrit index. The attenuation of the incident radiation caused by reflection and refraction at Fresnel boundaries of layers inside the medium is also considered.more » The simulated reflection spectra are compared with the experimental reflection spectra of the human skin. It is shown that a set of parameters that was used to describe the optical properties of skin layers and their possible variations, despite being far from complete, is nevertheless sufficient for the simulation of the reflection spectra of the human skin and their quantitative analysis. (laser applications and other topics in quantum electronics)« less

Improving Aerosol and Visibility Forecasting Capabilities Using Current and Future Generations of Satellite Observations

DTIC Science & Technology

2015-08-27

and 2) preparing for the post-MODIS/MISR era using the Geostationary Operational Environmental Satellite (GOES). 3. Improve model representations of...meteorological property retrievals. In this study, using collocated data from Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and Geostationary

REMOTE SENSING OF SEAGRASS WITH AVIRIS AND HIGH ALTITUDE AERIAL PHOTOGRAPHY

EPA Science Inventory

On May 15,2002 AVIRlS (Advanced VisuaJ/lnfrared Imaging Spectrometer) data and high altitude aerial photographs were acquired tor coastal .waters from Cape Lookout to Oregon Inlet, North Carolina. The study encompasses extensive areas of seagrass, federally protected submersed, r...

From the Ground Up: Building an Earth Science Satellite (HyspIRI Hawaii, Part 4)

NASA Image and Video Library

2017-04-20

Flying high aboard NASA’s ER-2, the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) uses over 224 sensors to identify, measure, and monitor natural features of the Earth's surface and atmosphere based on reflective light from the sun. The instrument was recently used for the Hyperspectral InfraRed Imager (HyspIRI) airborne preparatory mission, which focused on observing coral reef health and volcano emissions and eruptions around the Hawaiian Islands. Data from this mission will help develop a NASA satellite to study natural hazards and ecosystems. The Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) instrument is developed and managed by NASA's Jet Propulsion Laboratory, Pasadena, California. NASA’s ER-2 aircraft is managed and based at NASA’s Armstrong Flight Research Center, Building 703 in Palmdale, California. Read more about the HyspIRI Hawaii mission here: https://www.nasa.gov/feature/jpl/nasa-tests-observing-capability-on-hawaiis-coral-reefs https://www.nasa.gov/feature/jpl/nasa-led-campaign-studies-hawaii-s-iconic-volcanoes

From the Ground Up: Building an Earth Science Satellite (HyspIRI Hawaii, Part 2)

NASA Image and Video Library

2017-04-03

Flying high aboard NASA’s ER-2, the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) uses over 224 sensors to identify, measure, and monitor natural features of the Earth's surface and atmosphere based on reflective light from the sun. The instrument was recently used for the Hyperspectral InfraRed Imager (HyspIRI) airborne preparatory mission, which focused on observing coral reef health and volcano emissions and eruptions around the Hawaiian Islands. Data from this mission will help develop a NASA satellite to study natural hazards and ecosystems. The Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) instrument is developed and managed by NASA's Jet Propulsion Laboratory, Pasadena, California. NASA’s ER-2 aircraft is managed and based at NASA’s Armstrong Flight Research Center, Building 703 in Palmdale, California. Read more about the HyspIRI Hawaii mission here: https://www.nasa.gov/feature/jpl/nasa-tests-observing-capability-on-hawaiis-coral-reefs https://www.nasa.gov/feature/jpl/nasa-led-campaign-studies-hawaii-s-iconic-volcanoes

From the Ground Up: Building an Earth Science Satellite (HyspIRI Hawaii, Part 3)

NASA Image and Video Library

2017-04-12

Flying high aboard NASA’s ER-2, the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) uses over 224 sensors to identify, measure, and monitor natural features of the Earth's surface and atmosphere based on reflective light from the sun. The instrument was recently used for the Hyperspectral InfraRed Imager (HyspIRI) airborne preparatory mission, which focused on observing coral reef health and volcano emissions and eruptions around the Hawaiian Islands. Data from this mission will help develop a NASA satellite to study natural hazards and ecosystems. The Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) instrument is developed and managed by NASA's Jet Propulsion Laboratory, Pasadena, California. NASA’s ER-2 aircraft is managed and based at NASA’s Armstrong Flight Research Center, Building 703 in Palmdale, California. Read more about the HyspIRI Hawaii mission here: https://www.nasa.gov/feature/jpl/nasa-tests-observing-capability-on-hawaiis-coral-reefs https://www.nasa.gov/feature/jpl/nasa-led-campaign-studies-hawaii-s-iconic-volcanoes

Preliminary Analysis of AVIRIS Data for Tectonostratigraphic Assessment of Northern Guerrero State, Southern Mexico

NASA Technical Reports Server (NTRS)

Lang, Harold R.; Cabral-Cano, Enrique

1996-01-01

The tectonostratigraphic evolution of the southern margin of the North America Plate in Mexico is still in debate. Recent explanations assert Laramide age (Campanian-Eocene) accretion of far-travelled oceanic terranes. In 1989, we began an effort to bring new data to this debate through field mapping, incorporating Landsat Thematic Mapper and digital elevation data, along a 30 km by 250 km, east-west geologic transect of northern Guerrero State. Covering the region from Huetamo, Michoacan, to Papalutla, Guerrero (between latitude 18-19 deg N and longitude 101-99 deg W), our mapping results show that no stratigraphic incompatibilities suggesting terrane accretion exist in the region. In November 1994, AVIRIS data were acquired along the geologic transect in order to refine our stratigraphic assessment. One objective of this hyperspectral survey was to improve mapping of limestone, dolostone and gypsum-bearing facies of the Morelos Formation which record rudist carbonate platform environments during mid-Cretaceous time.

Atmospheric correction of short-wave hyperspectral imagery using a fast, full-scattering 1DVar retrieval scheme

NASA Astrophysics Data System (ADS)

Thelen, J.-C.; Havemann, S.; Taylor, J. P.

2012-06-01

Here, we present a new prototype algorithm for the simultaneous retrieval of the atmospheric profiles (temperature, humidity, ozone and aerosol) and the surface reflectance from hyperspectral radiance measurements obtained from air/space-borne, hyperspectral imagers such as the 'Airborne Visible/Infrared Imager (AVIRIS) or Hyperion on board of the Earth Observatory 1. The new scheme, proposed here, consists of a fast radiative transfer code, based on empirical orthogonal functions (EOFs), in conjunction with a 1D-Var retrieval scheme. The inclusion of an 'exact' scattering code based on spherical harmonics, allows for an accurate treatment of Rayleigh scattering and scattering by aerosols, water droplets and ice-crystals, thus making it possible to also retrieve cloud and aerosol optical properties, although here we will concentrate on non-cloudy scenes. We successfully tested this new approach using two hyperspectral images taken by AVIRIS, a whiskbroom imaging spectrometer operated by the NASA Jet Propulsion Laboratory.

EMPCA and Cluster Analysis of Quasar Spectra: Construction and Application to Simulated Spectra

NASA Astrophysics Data System (ADS)

Marrs, Adam; Leighly, Karen; Wagner, Cassidy; Macinnis, Francis

2017-01-01

Quasars have complex spectra with emission lines influenced by many factors. Therefore, to fully describe the spectrum requires specification of a large number of parameters, such as line equivalent width, blueshift, and ratios. Principal Component Analysis (PCA) aims to construct eigenvectors-or principal components-from the data with the goal of finding a few key parameters that can be used to predict the rest of the spectrum fairly well. Analysis of simulated quasar spectra was used to verify and justify our modified application of PCA.We used a variant of PCA called Weighted Expectation Maximization PCA (EMPCA; Bailey 2012) along with k-means cluster analysis to analyze simulated quasar spectra. Our approach combines both analytical methods to address two known problems with classical PCA. EMPCA uses weights to account for uncertainty and missing points in the spectra. K-means groups similar spectra together to address the nonlinearity of quasar spectra, specifically variance in blueshifts and widths of the emission lines.In producing and analyzing simulations, we first tested the effects of varying equivalent widths and blueshifts on the derived principal components, and explored the differences between standard PCA and EMPCA. We also tested the effects of varying signal-to-noise ratio. Next we used the results of fits to composite quasar spectra (see accompanying poster by Wagner et al.) to construct a set of realistic simulated spectra, and subjected those spectra to the EMPCA /k-means analysis. We concluded that our approach was validated when we found that the mean spectra from our k-means clusters derived from PCA projection coefficients reproduced the trends observed in the composite spectra.Furthermore, our method needed only two eigenvectors to identify both sets of correlations used to construct the simulations, as well as indicating the linear and nonlinear segments. Comparing this to regular PCA, which can require a dozen or more components, or to direct spectral analysis that may need measurement of 20 fit parameters, shows why the dual application of these two techniques is such a powerful tool.

Monte Carlo Simulation of X-Ray Spectra in Mammography and Contrast-Enhanced Digital Mammography Using the Code PENELOPE

NASA Astrophysics Data System (ADS)

Cunha, Diego M.; Tomal, Alessandra; Poletti, Martin E.

2013-04-01

In this work, the Monte Carlo (MC) code PENELOPE was employed for simulation of x-ray spectra in mammography and contrast-enhanced digital mammography (CEDM). Spectra for Mo, Rh and W anodes were obtained for tube potentials between 24-36 kV, for mammography, and between 45-49 kV, for CEDM. The spectra obtained from the simulations were analytically filtered to correspond to the anode/filter combinations usually employed in each technique (Mo/Mo, Rh/Rh and W/Rh for mammography and Mo/Cu, Rh/Cu and W/Cu for CEDM). For the Mo/Mo combination, the simulated spectra were compared with those obtained experimentally, and for spectra for the W anode, with experimental data from the literature, through comparison of distribution shape, average energies, half-value layers (HVL) and transmission curves. For all combinations evaluated, the simulated spectra were also compared with those provided by different models from the literature. Results showed that the code PENELOPE provides mammographic x-ray spectra in good agreement with those experimentally measured and those from the literature. The differences in the values of HVL ranged between 2-7%, for anode/filter combinations and tube potentials employed in mammography, and they were less than 5% for those employed in CEDM. The transmission curves for the spectra obtained also showed good agreement compared to those computed from reference spectra, with average relative differences less than 12% for mammography and CEDM. These results show that the code PENELOPE can be a useful tool to generate x-ray spectra for studies in mammography and CEDM, and also for evaluation of new x-ray tube designs and new anode materials.

Next Generation Snow Cover Mapping: Can Future Hyperspectral Satellite Spectrometer Systems Improve Subpixel Snow-covered Area and Grain Size in the Sierra Nevada?

NASA Astrophysics Data System (ADS)

Hill, R.; Calvin, W. M.; Harpold, A.

2017-12-01

Mountain snow storage is the dominant source of water for humans and ecosystems in western North America. Consequently, the spatial distribution of snow-covered area is fundamental to both hydrological, ecological, and climate models. Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data were collected along the entire Sierra Nevada mountain range extending from north of Lake Tahoe to south of Mt. Whitney during the 2015 and 2016 snow-covered season. The AVIRIS dataset used in this experiment consists of 224 contiguous spectral channels with wavelengths ranging 400-2500 nanometers at a 15-meter spatial pixel size. Data from the Sierras were acquired on four days: 2/24/15 during a very low snow year, 3/24/16 near maximum snow accumulation, and 5/12/16 and 5/18/16 during snow ablation and snow loss. Building on previous retrieval of subpixel snow-covered area algorithms that take into account varying grain size we present a model that analyzes multiple endmembers of varying snow grain size, vegetation, rock, and soil in segmented regions along the Sierra Nevada to determine snow-cover spatial extent, snow sub-pixel fraction, and approximate grain size. In addition, varying simulated models of the data will compare and contrast the retrieval of current snow products such as MODIS Snow-Covered Area and Grain Size (MODSCAG) and the Airborne Space Observatory (ASO). Specifically, does lower spatial resolution (MODIS), broader resolution bandwidth (MODIS), and limited spectral resolution (ASO) affect snow-cover area and grain size approximations? The implications of our findings will help refine snow mapping products for planned hyperspectral satellite spectrometer systems such as EnMAP (slated to launch in 2019), HISUI (planned for inclusion on the International Space Station in 2018), and HyspIRI (currently under consideration).

Data Processing Algorithm for Diagnostics of Combustion Using Diode Laser Absorption Spectrometry.

PubMed

Mironenko, Vladimir R; Kuritsyn, Yuril A; Liger, Vladimir V; Bolshov, Mikhail A

2018-02-01

A new algorithm for the evaluation of the integral line intensity for inferring the correct value for the temperature of a hot zone in the diagnostic of combustion by absorption spectroscopy with diode lasers is proposed. The algorithm is based not on the fitting of the baseline (BL) but on the expansion of the experimental and simulated spectra in a series of orthogonal polynomials, subtracting of the first three components of the expansion from both the experimental and simulated spectra, and fitting the spectra thus modified. The algorithm is tested in the numerical experiment by the simulation of the absorption spectra using a spectroscopic database, the addition of white noise, and the parabolic BL. Such constructed absorption spectra are treated as experimental in further calculations. The theoretical absorption spectra were simulated with the parameters (temperature, total pressure, concentration of water vapor) close to the parameters used for simulation of the experimental data. Then, spectra were expanded in the series of orthogonal polynomials and first components were subtracted from both spectra. The value of the correct integral line intensities and hence the correct temperature evaluation were obtained by fitting of the thus modified experimental and simulated spectra. The dependence of the mean and standard deviation of the evaluation of the integral line intensity on the linewidth and the number of subtracted components (first two or three) were examined. The proposed algorithm provides a correct estimation of temperature with standard deviation better than 60 K (for T = 1000 K) for the line half-width up to 0.6 cm -1 . The proposed algorithm allows for obtaining the parameters of a hot zone without the fitting of usually unknown BL.

2D fluorescence spectra measurement of six kinds of bioagents simulants by short range Lidar

NASA Astrophysics Data System (ADS)

Sanpedro, Man

2018-02-01

Pantoea agglomerans (Pan), Staphylococcus aureus (Sta), Bacillus globigii (BG) and Escherichia coli (EH), these four kinds of bioagents simulants of were cultured and then their growth curves were measured, the generation time was 0.99h, 0.835h, 1.07h and 1.909h, respectively. A small short range fluorescence lidar working at wavelengths of 266nm and 355nm was designed and used to measure the two-dimensional fluorescence spectra of bioagents simulants in the amino acid segment and NADH segment, respectively. In a controllable fluorescence measurement chamber, the two-dimensional fluorescence spectra of vegetative liquid bacterial aerosols as well as BSA and OVA, two protein toxinic simulants were measured with a resolution of 4nm. The two-dimensional fluorescence spectral shape of Pan, Sta, EH and BG, BSA and OVA were consistent with the standard fluorescent component tryptophan in the amino acid band with FWHM of 60nm, but the central wavelength of the fluorescence spectra of these simulants blue/purple shifted obviously as affected by the external biochemical environment, concentration and ratio of different bacterial internal fluorophores, so the energy level between the excited state and the ground state of the fluorescence molecule increased. Differently, weak NADH fluorescence spectra with 100nm FWHM inside the four vegetative bacteria aerosols were detected, but Rayleigh scattering, Raman scattering contribution of water, nitrogen in the fluorescence spectra could not be effectively extracted. The second - order derivative fluorescence spectra of four simulants showed that the high - order processing and recognition of the fluorescence spectra was feasible.

Iterative retrieval of surface emissivity and temperature for a hyperspectral sensor

DOE Office of Scientific and Technical Information (OSTI.GOV)

Borel, C.C.

1997-11-01

The central problem of temperature-emissivity separation is that we obtain N spectral measurements of radiance and need to find N + 1 unknowns (N emissivities and one temperature). To solve this problem in the presence of the atmosphere we need to find even more unknowns: N spectral transmissions {tau}{sub atmo}({lambda}) up-welling path radiances L{sub path}{up_arrow}({lambda}) and N down-welling path radiances L{sub path}{down_arrow}({lambda}). Fortunately there are radiative transfer codes such as MODTRAN 3 and FASCODE available to get good estimates of {tau}{sub atmo}({lambda}), L{sub path}{up_arrow}({lambda}) and L{sub path}{down_arrow}({lambda}) in the order of a few percent. With the growing use of hyperspectralmore » imagers, e.g. AVIRIS in the visible and short-wave infrared there is hope of using such instruments in the mid-wave and thermal IR (TIR) some day. We believe that this will enable us to get around using the present temperature - emissivity separation (TES) algorithms using methods which take advantage of the many channels available in hyperspectral imagers. The first idea we had is to take advantage of the simple fact that a typical surface emissivity spectrum is rather smooth compared to spectral features introduced by the atmosphere. Thus iterative solution techniques can be devised which retrieve emissivity spectra {epsilon} based on spectral smoothness. To make the emissivities realistic, atmospheric parameters are varied using approximations, look-up tables derived from a radiative transfer code and spectral libraries. By varying the surface temperature over a small range a series of emissivity spectra are calculated. The one with the smoothest characteristic is chosen. The algorithm was tested on synthetic data using MODTRAN and the Salisbury emissivity database.« less

EXhype: A tool for mineral classification using hyperspectral data

NASA Astrophysics Data System (ADS)

Adep, Ramesh Nityanand; shetty, Amba; Ramesh, H.

2017-02-01

Various supervised classification algorithms have been developed to classify earth surface features using hyperspectral data. Each algorithm is modelled based on different human expertises. However, the performance of conventional algorithms is not satisfactory to map especially the minerals in view of their typical spectral responses. This study introduces a new expert system named 'EXhype (Expert system for hyperspectral data classification)' to map minerals. The system incorporates human expertise at several stages of it's implementation: (i) to deal with intra-class variation; (ii) to identify absorption features; (iii) to discriminate spectra by considering absorption features, non-absorption features and by full spectra comparison; and (iv) finally takes a decision based on learning and by emphasizing most important features. It is developed using a knowledge base consisting of an Optimal Spectral Library, Segmented Upper Hull method, Spectral Angle Mapper (SAM) and Artificial Neural Network. The performance of the EXhype is compared with a traditional, most commonly used SAM algorithm using Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data acquired over Cuprite, Nevada, USA. A virtual verification method is used to collect samples information for accuracy assessment. Further, a modified accuracy assessment method is used to get a real users accuracies in cases where only limited or desired classes are considered for classification. With the modified accuracy assessment method, SAM and EXhype yields an overall accuracy of 60.35% and 90.75% and the kappa coefficient of 0.51 and 0.89 respectively. It was also found that the virtual verification method allows to use most desired stratified random sampling method and eliminates all the difficulties associated with it. The experimental results show that EXhype is not only producing better accuracy compared to traditional SAM but, can also rightly classify the minerals. It is proficient in avoiding misclassification between target classes when applied on minerals.

Developing Methods for Fraction Cover Estimation Toward Global Mapping of Ecosystem Composition

NASA Astrophysics Data System (ADS)

Roberts, D. A.; Thompson, D. R.; Dennison, P. E.; Green, R. O.; Kokaly, R. F.; Pavlick, R.; Schimel, D.; Stavros, E. N.

2016-12-01

Terrestrial vegetation seldom covers an entire pixel due to spatial mixing at many scales. Estimating the fractional contributions of photosynthetic green vegetation (GV), non-photosynthetic vegetation (NPV), and substrate (soil, rock, etc.) to mixed spectra can significantly improve quantitative remote measurement of terrestrial ecosystems. Traditional methods for estimating fractional vegetation cover rely on vegetation indices that are sensitive to variable substrate brightness, NPV and sun-sensor geometry. Spectral mixture analysis (SMA) is an alternate framework that provides estimates of fractional cover. However, simple SMA, in which the same set of endmembers is used for an entire image, fails to account for natural spectral variability within a cover class. Multiple Endmember Spectral Mixture Analysis (MESMA) is a variant of SMA that allows the number and types of pure spectra to vary on a per-pixel basis, thereby accounting for endmember variability and generating more accurate cover estimates, but at a higher computational cost. Routine generation and delivery of GV, NPV, and substrate (S) fractions using MESMA is currently in development for large, diverse datasets acquired by the Airborne Visible Infrared Imaging Spectrometer (AVIRIS). We present initial results, including our methodology for ensuring consistency and generalizability of fractional cover estimates across a wide range of regions, seasons, and biomes. We also assess uncertainty and provide a strategy for validation. GV, NPV, and S fractions are an important precursor for deriving consistent measurements of ecosystem parameters such as plant stress and mortality, functional trait assessment, disturbance susceptibility and recovery, and biomass and carbon stock assessment. Copyright 2016 California Institute of Technology. All Rights Reserved. We acknowledge support of the US Government, NASA, the Earth Science Division and Terrestrial Ecology program.

FSFE: Fake Spectra Flux Extractor

NASA Astrophysics Data System (ADS)

Bird, Simeon

2017-10-01

The fake spectra flux extractor generates simulated quasar absorption spectra from a particle or adaptive mesh-based hydrodynamic simulation. It is implemented as a python module. It can produce both hydrogen and metal line spectra, if the simulation includes metals. The cloudy table for metal ionization fractions is included. Unlike earlier spectral generation codes, it produces absorption from each particle close to the sight-line individually, rather than first producing an average density in each spectral pixel, thus substantially preserving more of the small-scale velocity structure of the gas. The code supports both Gadget (ascl:0003.001) and AREPO.

Towards the estimation of the scattered energy spectra reaching the head of the medical staff during interventional radiology: A Monte Carlo simulation study

NASA Astrophysics Data System (ADS)

Zagorska, A.; Bliznakova, K.; Buchakliev, Z.

2015-09-01

In 2012, the International Commission on Radiological Protection has recommended a reduction of the dose limits to the eye lens for occupational exposure. Recent studies showed that in interventional rooms is possible to reach these limits especially without using protective equipment. The aim of this study was to calculate the scattered energy spectra distribution at the level of the operator's head. For this purpose, an in-house developed Monte Carlo-based computer application was used to design computational phantoms (patient and operator), the acquisition geometry as well as to simulate the photon transport through the designed system. The initial spectra from 70 kV tube voltage and 8 different filtrations were calculated according to the IPEM Report 78. An experimental study was carried out to verify the results from the simulations. The calculated scattered radiation distributions were compared to the initial incident on the patient spectra. Results showed that there is no large difference between the effective energies of the scattered spectra registered in front of the operator's head obtained from simulations of all 8 incident spectra. The results from the experimental study agreed well to simulations as well.

Measurement and Simulation of First-Orbit Fast-Ion D-Alpha Emission and the Application to Fast-Ion Loss Detection in the DIII-D Tokamak

NASA Astrophysics Data System (ADS)

Bolte, Nathan; Heidbrink, W. W.; Pace, D. C.; van Zeeland, M. A.; Chen, X.

2015-11-01

A new fast-ion diagnostic method uses passive emission of D-alpha radiation to determine fast-ion losses quantitatively. The passive fast-ion D-alpha simulation (P-FIDAsim) forward models the Doppler-shifted spectra of first-orbit fast ions that charge exchange with edge neutrals. Simulated spectra are up to 80 % correlated with experimental spectra. Calibrated spectra are used to estimate the 2D neutral density profile by inverting simulated spectra. The inferred neutral density shows the expected increase toward each x-point and an average value of 8 × 10 9 cm-3 at the plasma boundary and 1 × 10 11 cm-3 near the wall. Measuring and simulating first-orbit spectra effectively ``calibrates'' the system, allowing for the quantification of more general fast-ion losses. Sawtooth crashes are estimated to eject 1.2 % of the fast-ion inventory, in good agreement with a 1.7 % loss estimate made by TRANSP. Sightlines sensitive to passing ions observe larger sawtooth losses than sightlines sensitive to trapped ions. Supported by US DOE under SC-G903402, DE-FC02-04ER54698.

Improvements to a High Spectral Resolution, Radiation-Hydrodynamics Model of a Lightning Return Stroke and Comparisons with Measured Spectra and Inferred Plasma Properties

NASA Astrophysics Data System (ADS)

Edwards, J. D.; Dreike, P.; Smith, M. W.; Clemenson, M. D.; Zollweg, J. D.

2015-12-01

We describe developments to a 1-D cylindrical, radiation-hydrodynamics model of a lightning return stroke that simulates lighting spectra with 1 Angstrom resolution in photon wavelength. In previous calculations we assumed standard density air in the return stroke channel and the resulting optical spectrum was that of an optically thick emitter, unlike measured spectra that are optically thin. In this work, we improve our model by initializing our simulation assuming that the leader-heated channel is pre-expanded to a density of 0.01-0.05 ambient and near pressure equilibrium with the surrounding ambient air and by implementing a time-dependent, external heat source to incorporate the effects of continuing current. By doing so, our simulated spectra, illustrated in the attached figure, show strong spectral emission characteristics at wavelengths similar to spectra measured by Orville (1968). In this poster, we describe our model and compare our simulated results with spectra measured by Orville (1968) and Smith (2015). We also use spectroscopic methods to compute physical properties of the plasma channel, e.g. temperature, from Smith's measurements and compare these with our simulated results.

Composite load spectra for select space propulsion structural components

NASA Technical Reports Server (NTRS)

Newell, J. F.; Kurth, R. E.; Ho, H.

1991-01-01

The objective of this program is to develop generic load models with multiple levels of progressive sophistication to simulate the composite (combined) load spectra that are induced in space propulsion system components, representative of Space Shuttle Main Engines (SSME), such as transfer ducts, turbine blades, and liquid oxygen posts and system ducting. The first approach will consist of using state of the art probabilistic methods to describe the individual loading conditions and combinations of these loading conditions to synthesize the composite load spectra simulation. The second approach will consist of developing coupled models for composite load spectra simulation which combine the deterministic models for composite load dynamic, acoustic, high pressure, and high rotational speed, etc., load simulation using statistically varying coefficients. These coefficients will then be determined using advanced probabilistic simulation methods with and without strategically selected experimental data.

Depth Derivation from the Worldview-2 Satellite Using Hyperspectral Imagery

DTIC Science & Technology

2009-03-01

6 C. MULTISPECTRAL IMAGERY FROM QUICKBIRD ..............................7 D . HYPERSPECTRAL IMAGERY FROM AVIRIS...27 D . TRANSECTS .................................................................................................29 1. Transect 1...520-600nm), red (630-690nm) and near-IR (760-900nm). Figure 4. Quickbird Satellite (from: http://www.digitalglobe.com/index.php/85/QuickBird) D

Monitoring of Volcanogenic CO(sub 2)-Induced Tree Kills with AVIRIS Image Data at Mammoth Mountain, California

NASA Technical Reports Server (NTRS)

Pieri, D.; Farrar, C.; Hausback, B.; Strong, M.

1998-01-01

Elevated cold CO2 emissions from the flank of Mammoth Mountain volcano on the southwest rim of the Long Valley Caldera, eastern California, have been the cause of over 100 acres of dead trees in that area since 1990.

Multinuclear NMR of CaSiO(3) glass: simulation from first-principles.

PubMed

Pedone, Alfonso; Charpentier, Thibault; Menziani, Maria Cristina

2010-06-21

An integrated computational method which couples classical molecular dynamics simulations with density functional theory calculations is used to simulate the solid-state NMR spectra of amorphous CaSiO(3). Two CaSiO(3) glass models are obtained by shell-model molecular dynamics simulations, successively relaxed at the GGA-PBE level of theory. The calculation of the NMR parameters (chemical shielding and quadrupolar parameters), which are then used to simulate solid-state 1D and 2D-NMR spectra of silicon-29, oxygen-17 and calcium-43, is achieved by the gauge including projector augmented-wave (GIPAW) and the projector augmented-wave (PAW) methods. It is shown that the limitations due to the finite size of the MD models can be overcome using a Kernel Estimation Density (KDE) approach to simulate the spectra since it better accounts for the disorder effects on the NMR parameter distribution. KDE allows reconstructing a smoothed NMR parameter distribution from the MD/GIPAW data. Simulated NMR spectra calculated with the present approach are found to be in excellent agreement with the experimental data. This further validates the CaSiO(3) structural model obtained by MD simulations allowing the inference of relationships between structural data and NMR response. The methods used to simulate 1D and 2D-NMR spectra from MD GIPAW data have been integrated in a package (called fpNMR) freely available on request.

First light with Trident: multi-platform synthetic quasar spectra

NASA Astrophysics Data System (ADS)

Silvia, Devin W.; Hummels, Cameron B.; Smith, Britton

2017-01-01

Observational efforts to better understand the nature of the intergalactic and circumgalactic media have relied heavily on the information encoded in the absorption line systems of quasar spectra. Numerical simulations of large-scale structure and galaxy evolution are well-suited to explore the properties of those same media owing to the relative ease with which one can access physical quantities from complex, three-dimensional data. However, a difficulty arises when one tries to make direct “apple-to-apples” comparisons between observed spectra and simulated data. In an effort to provide a common language capable of linking theory and observation, we announce the release of Trident. Trident is a publicly available software tool that enables the creation of realistic synthetic absorption spectra from virtually all widely-used hydrodynamics simulation codes. Through user-controlled levels of spectral realism, direct comparisons between simulated and observed data become not only possible, but greatly simplified. We present the methods for extracting artificial quasar sightlines and generating spectra as well as early-stage applications of those spectra to intergalactic and circumgalactic absorption line studies.

Comparison of remotely sensed continental-shelf wave spectra with spectra computed by using a wave refraction computer model

NASA Technical Reports Server (NTRS)

Poole, L. R.

1976-01-01

An initial attempt was made to verify the Langley Research Center and Virginia Institute of Marine Science mid-Atlantic continental-shelf wave refraction model. The model was used to simulate refraction occurring during a continental-shelf remote sensing experiment conducted on August 17, 1973. Simulated wave spectra compared favorably, in a qualitative sense, with the experimental spectra. However, it was observed that most of the wave energy resided at frequencies higher than those for which refraction and shoaling effects were predicted, In addition, variations among the experimental spectra were so small that they were not considered statistically significant. In order to verify the refraction model, simulation must be performed in conjunction with a set of significantly varying spectra in which a considerable portion of the total energy resides at frequencies for which refraction and shoaling effects are likely.

Modeling the thermal unfolding 2DIR spectra of a β-hairpin peptide based on the implicit solvent MD simulation.

PubMed

Wu, Tianmin; Yang, Lijiang; Zhang, Ruiting; Shao, Qiang; Zhuang, Wei

2013-07-25

We simulated the equilibrium isotope-edited FTIR and 2DIR spectra of a β-hairpin peptide trpzip2 at a series of temperatures. The simulation was based on the configuration distributions generated using the GB(OBC) implicit solvent model and the integrated tempering sampling (ITS) technique. A soaking procedure was adapted to generate the peptide in explicit solvent configurations for the spectroscopy calculations. The nonlinear exciton propagation (NEP) method was then used to calculate the spectra. Agreeing with the experiments, the intensities and ellipticities of the isotope-shifted peaks in our simulated signals have the site-specific temperature dependences, which suggest the inhomogeneous local thermal stabilities along the peptide chain. Our simulation thus proposes a cost-effective means to understand a peptide's conformational change and related IR spectra across its thermal unfolding transition.

Accurate Modeling of Dark-Field Scattering Spectra of Plasmonic Nanostructures.

PubMed

Jiang, Liyong; Yin, Tingting; Dong, Zhaogang; Liao, Mingyi; Tan, Shawn J; Goh, Xiao Ming; Allioux, David; Hu, Hailong; Li, Xiangyin; Yang, Joel K W; Shen, Zexiang

2015-10-27

Dark-field microscopy is a widely used tool for measuring the optical resonance of plasmonic nanostructures. However, current numerical methods for simulating the dark-field scattering spectra were carried out with plane wave illumination either at normal incidence or at an oblique angle from one direction. In actual experiments, light is focused onto the sample through an annular ring within a range of glancing angles. In this paper, we present a theoretical model capable of accurately simulating the dark-field light source with an annular ring. Simulations correctly reproduce a counterintuitive blue shift in the scattering spectra from gold nanodisks with a diameter beyond 140 nm. We believe that our proposed simulation method can be potentially applied as a general tool capable of simulating the dark-field scattering spectra of plasmonic nanostructures as well as other dielectric nanostructures with sizes beyond the quasi-static limit.

The effect of thermal velocities on structure formation in N-body simulations of warm dark matter

NASA Astrophysics Data System (ADS)

Leo, Matteo; Baugh, Carlton M.; Li, Baojiu; Pascoli, Silvia

2017-11-01

We investigate the impact of thermal velocities in N-body simulations of structure formation in warm dark matter models. Adopting the commonly used approach of adding thermal velocities, randomly selected from a Fermi-Dirac distribution, to the gravitationally-induced velocities of the simulation particles, we compare the matter and velocity power spectra measured from CDM and WDM simulations, in the latter case with and without thermal velocities. This prescription for adding thermal velocities introduces numerical noise into the initial conditions, which influences structure formation. At early times, the noise affects dramatically the power spectra measured from simulations with thermal velocities, with deviations of the order of ~ Script O(10) (in the matter power spectra) and of the order of ~ Script O(102) (in the velocity power spectra) compared to those extracted from simulations without thermal velocities. At late times, these effects are less pronounced with deviations of less than a few percent. Increasing the resolution of the N-body simulation shifts these discrepancies to higher wavenumbers. We also find that spurious haloes start to appear in simulations which include thermal velocities at a mass that is ~3 times larger than in simulations without thermal velocities.

A Simulation Program for Dynamic Infrared (IR) Spectra

ERIC Educational Resources Information Center

Zoerb, Matthew C.; Harris, Charles B.

2013-01-01

A free program for the simulation of dynamic infrared (IR) spectra is presented. The program simulates the spectrum of two exchanging IR peaks based on simple input parameters. Larger systems can be simulated with minor modifications. The program is available as an executable program for PCs or can be run in MATLAB on any operating system. Source…

Mapping minerals, amorphous materials, environmental materials, vegetation, water, ice and snow, and other materials: The USGS tricorder algorithm

NASA Technical Reports Server (NTRS)

Clark, Roger N.; Swayze, Gregg A.

1995-01-01

One of the challenges of Imaging Spectroscopy is the identification, mapping and abundance determination of materials, whether mineral, vegetable, or liquid, given enough spectral range, spectral resolution, signal to noise, and spatial resolution. Many materials show diagnostic absorption features in the visual and near infrared region (0.4 to 2.5 micrometers) of the spectrum. This region is covered by the modern imaging spectrometers such as AVIRIS. The challenge is to identify the materials from absorption bands in their spectra, and determine what specific analyses must be done to derive particular parameters of interest, ranging from simply identifying its presence to deriving its abundance, or determining specific chemistry of the material. Recently, a new analysis algorithm was developed that uses a digital spectral library of known materials and a fast, modified-least-squares method of determining if a single spectral feature for a given material is present. Clark et al. made another advance in the mapping algorithm: simultaneously mapping multiple minerals using multiple spectral features. This was done by a modified-least-squares fit of spectral features, from data in a digital spectral library, to corresponding spectral features in the image data. This version has now been superseded by a more comprehensive spectral analysis system called Tricorder.

AVIRIS calibration using the cloud-shadow method

NASA Technical Reports Server (NTRS)

Carder, K. L.; Reinersman, P.; Chen, R. F.

1993-01-01

More than 90 percent of the signal at an ocean-viewing, satellite sensor is due to the atmosphere, so a 5 percent sensor-calibration error viewing a target that contributes but 10 percent of the signal received at the sensor may result in a target-reflectance error of more than 50 percent. Since prelaunch calibration accuracies of 5 percent are typical of space-sensor requirements, recalibration of the sensor using ground-base methods is required for low-signal target. Known target reflectance or water-leaving radiance spectra and atmospheric correction parameters are required. In this article we describe an atmospheric-correction method that uses cloud shadowed pixels in combination with pixels in a neighborhood region of similar optical properties to remove atmospheric effects from ocean scenes. These neighboring pixels can then be used as known reflectance targets for validation of the sensor calibration and atmospheric correction. The method uses the difference between water-leaving radiance values for these two regions. This allows nearly identical optical contributions to the two signals (e.g., path radiance and Fresnel-reflected skylight) to be removed, leaving mostly solar photons backscattered from beneath the sea to dominate the residual signal. Normalization by incident solar irradiance reaching the sea surface provides the remote-sensing reflectance of the ocean at the location of the neighbor region.

Multi-pass encoding of hyperspectral imagery with spectral quality control

NASA Astrophysics Data System (ADS)

Wasson, Steven; Walker, William

2015-05-01

Multi-pass encoding is a technique employed in the field of video compression that maximizes the quality of an encoded video sequence within the constraints of a specified bit rate. This paper presents research where multi-pass encoding is extended to the field of hyperspectral image compression. Unlike video, which is primarily intended to be viewed by a human observer, hyperspectral imagery is processed by computational algorithms that generally attempt to classify the pixel spectra within the imagery. As such, these algorithms are more sensitive to distortion in the spectral dimension of the image than they are to perceptual distortion in the spatial dimension. The compression algorithm developed for this research, which uses the Karhunen-Loeve transform for spectral decorrelation followed by a modified H.264/Advanced Video Coding (AVC) encoder, maintains a user-specified spectral quality level while maximizing the compression ratio throughout the encoding process. The compression performance may be considered near-lossless in certain scenarios. For qualitative purposes, this paper presents the performance of the compression algorithm for several Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and Hyperion datasets using spectral angle as the spectral quality assessment function. Specifically, the compression performance is illustrated in the form of rate-distortion curves that plot spectral angle versus bits per pixel per band (bpppb).

Imaging spectroscopy links aspen genotype with below-ground processes at landscape scales

PubMed Central

Madritch, Michael D.; Kingdon, Clayton C.; Singh, Aditya; Mock, Karen E.; Lindroth, Richard L.; Townsend, Philip A.

2014-01-01

Fine-scale biodiversity is increasingly recognized as important to ecosystem-level processes. Remote sensing technologies have great potential to estimate both biodiversity and ecosystem function over large spatial scales. Here, we demonstrate the capacity of imaging spectroscopy to discriminate among genotypes of Populus tremuloides (trembling aspen), one of the most genetically diverse and widespread forest species in North America. We combine imaging spectroscopy (AVIRIS) data with genetic, phytochemical, microbial and biogeochemical data to determine how intraspecific plant genetic variation influences below-ground processes at landscape scales. We demonstrate that both canopy chemistry and below-ground processes vary over large spatial scales (continental) according to aspen genotype. Imaging spectrometer data distinguish aspen genotypes through variation in canopy spectral signature. In addition, foliar spectral variation correlates well with variation in canopy chemistry, especially condensed tannins. Variation in aspen canopy chemistry, in turn, is correlated with variation in below-ground processes. Variation in spectra also correlates well with variation in soil traits. These findings indicate that forest tree species can create spatial mosaics of ecosystem functioning across large spatial scales and that these patterns can be quantified via remote sensing techniques. Moreover, they demonstrate the utility of using optical properties as proxies for fine-scale measurements of biodiversity over large spatial scales. PMID:24733949

A linear spectral matching technique for retrieving equivalent water thickness and biochemical constituents of green vegetation

NASA Technical Reports Server (NTRS)

Gao, Bo-Cai; Goetz, Alexander F. H.

1992-01-01

Over the last decade, technological advances in airborne imaging spectrometers, having spectral resolution comparable with laboratory spectrometers, have made it possible to estimate biochemical constituents of vegetation canopies. Wessman estimated lignin concentration from data acquired with NASA's Airborne Imaging Spectrometer (AIS) over Blackhawk Island in Wisconsin. A stepwise linear regression technique was used to determine the single spectral channel or channels in the AIS data that best correlated with measured lignin contents using chemical methods. The regression technique does not take advantage of the spectral shape of the lignin reflectance feature as a diagnostic tool nor the increased discrimination among other leaf components with overlapping spectral features. A nonlinear least squares spectral matching technique was recently reported for deriving both the equivalent water thicknesses of surface vegetation and the amounts of water vapor in the atmosphere from contiguous spectra measured with the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS). The same technique was applied to a laboratory reflectance spectrum of fresh, green leaves. The result demonstrates that the fresh leaf spectrum in the 1.0-2.5 microns region consists of spectral components of dry leaves and the spectral component of liquid water. A linear least squares spectral matching technique for retrieving equivalent water thickness and biochemical components of green vegetation is described.

Trident: A Universal Tool for Generating Synthetic Absorption Spectra from Astrophysical Simulations

NASA Astrophysics Data System (ADS)

Hummels, Cameron B.; Smith, Britton D.; Silvia, Devin W.

2017-09-01

Hydrodynamical simulations are increasingly able to accurately model physical systems on stellar, galactic, and cosmological scales; however, the utility of these simulations is often limited by our ability to directly compare them with the data sets produced by observers: spectra, photometry, etc. To address this problem, we have created trident, a Python-based open-source tool for post-processing hydrodynamical simulations to produce synthetic absorption spectra and related data. trident can (I) create absorption-line spectra for any trajectory through a simulated data set mimicking both background quasar and down-the-barrel configurations; (II) reproduce the spectral characteristics of common instruments like the Cosmic Origins Spectrograph; (III) operate across the ultraviolet, optical, and infrared using customizable absorption-line lists; (IV) trace simulated physical structures directly to spectral features; (v) approximate the presence of ion species absent from the simulation outputs; (VI) generate column density maps for any ion; and (vii) provide support for all major astrophysical hydrodynamical codes. trident was originally developed to aid in the interpretation of observations of the circumgalactic medium and intergalactic medium, but it remains a general tool applicable in other contexts.

Computer simulation of ion beam analysis of laterally inhomogeneous materials

NASA Astrophysics Data System (ADS)

Mayer, M.

2016-03-01

The program STRUCTNRA for the simulation of ion beam analysis charged particle spectra from arbitrary two-dimensional distributions of materials is described. The code is validated by comparison to experimental backscattering data from a silicon grating on tantalum at different orientations and incident angles. Simulated spectra for several types of rough thin layers and a chessboard-like arrangement of materials as example for a multi-phase agglomerate material are presented. Ambiguities between back-scattering spectra from two-dimensional and one-dimensional sample structures are discussed.

ISBDD Model for Classification of Hyperspectral Remote Sensing Imagery

PubMed Central

Li, Na; Xu, Zhaopeng; Zhao, Huijie; Huang, Xinchen; Drummond, Jane; Wang, Daming

2018-01-01

The diverse density (DD) algorithm was proposed to handle the problem of low classification accuracy when training samples contain interference such as mixed pixels. The DD algorithm can learn a feature vector from training bags, which comprise instances (pixels). However, the feature vector learned by the DD algorithm cannot always effectively represent one type of ground cover. To handle this problem, an instance space-based diverse density (ISBDD) model that employs a novel training strategy is proposed in this paper. In the ISBDD model, DD values of each pixel are computed instead of learning a feature vector, and as a result, the pixel can be classified according to its DD values. Airborne hyperspectral data collected by the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) sensor and the Push-broom Hyperspectral Imager (PHI) are applied to evaluate the performance of the proposed model. Results show that the overall classification accuracy of ISBDD model on the AVIRIS and PHI images is up to 97.65% and 89.02%, respectively, while the kappa coefficient is up to 0.97 and 0.88, respectively. PMID:29510547

The Spectral Image Processing System (SIPS): Software for integrated analysis of AVIRIS data

NASA Technical Reports Server (NTRS)

Kruse, F. A.; Lefkoff, A. B.; Boardman, J. W.; Heidebrecht, K. B.; Shapiro, A. T.; Barloon, P. J.; Goetz, A. F. H.

1992-01-01

The Spectral Image Processing System (SIPS) is a software package developed by the Center for the Study of Earth from Space (CSES) at the University of Colorado, Boulder, in response to a perceived need to provide integrated tools for analysis of imaging spectrometer data both spectrally and spatially. SIPS was specifically designed to deal with data from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and the High Resolution Imaging Spectrometer (HIRIS), but was tested with other datasets including the Geophysical and Environmental Research Imaging Spectrometer (GERIS), GEOSCAN images, and Landsat TM. SIPS was developed using the 'Interactive Data Language' (IDL). It takes advantage of high speed disk access and fast processors running under the UNIX operating system to provide rapid analysis of entire imaging spectrometer datasets. SIPS allows analysis of single or multiple imaging spectrometer data segments at full spatial and spectral resolution. It also allows visualization and interactive analysis of image cubes derived from quantitative analysis procedures such as absorption band characterization and spectral unmixing. SIPS consists of three modules: SIPS Utilities, SIPS_View, and SIPS Analysis. SIPS version 1.1 is described below.

Endmember extraction from hyperspectral image based on discrete firefly algorithm (EE-DFA)

NASA Astrophysics Data System (ADS)

Zhang, Chengye; Qin, Qiming; Zhang, Tianyuan; Sun, Yuanheng; Chen, Chao

2017-04-01

This study proposed a novel method to extract endmembers from hyperspectral image based on discrete firefly algorithm (EE-DFA). Endmembers are the input of many spectral unmixing algorithms. Hence, in this paper, endmember extraction from hyperspectral image is regarded as a combinational optimization problem to get best spectral unmixing results, which can be solved by the discrete firefly algorithm. Two series of experiments were conducted on the synthetic hyperspectral datasets with different SNR and the AVIRIS Cuprite dataset, respectively. The experimental results were compared with the endmembers extracted by four popular methods: the sequential maximum angle convex cone (SMACC), N-FINDR, Vertex Component Analysis (VCA), and Minimum Volume Constrained Nonnegative Matrix Factorization (MVC-NMF). What's more, the effect of the parameters in the proposed method was tested on both synthetic hyperspectral datasets and AVIRIS Cuprite dataset, and the recommended parameters setting was proposed. The results in this study demonstrated that the proposed EE-DFA method showed better performance than the existing popular methods. Moreover, EE-DFA is robust under different SNR conditions.

Terahertz spectral characteristics of two kinds of important functional oligosaccharides

NASA Astrophysics Data System (ADS)

Li, Ge; Liu, Wei; Wang, Wenai

2018-01-01

The absorption spectra of two kinds of important functional oligosaccharides were firstly acquired based on Fourier transform infrared spectroscopy in the range of 0.15-10THz. The simulation results of their infrared spectra were given based on Gaussian software, which were in good agreement with the experiment results. The rotation spectra and some perssad vibration spectra of these molecules were analyzed, and their absorption peaks were exactly identified. The components information was obtained by comparing the simulation results of different molecules.

Developing a Soil Moisture Index for California Grasslands from Airborne Hyperspectral Imagery

NASA Astrophysics Data System (ADS)

Flamme, H. E.; Roberts, D. A.; Miller, D. L.

2016-12-01

Soil moisture is a key environmental factor controlling vegetation diversity and productivity, evaporation, transpiration, and rainfall runoff. Despite the contribution of soil moisture to ecological productivity, the hydrologic cycle, and erosion, it is currently not being monitored as accurately or as frequently as other environmental factors. Traditional soil moisture monitoring techniques rely on in situ measurements, which become costly when evaluating areas of unevenly distributed soil characteristics and varying topography. Alternatively, satellite remote sensing, such as passive microwave from SMAP, can provide soil moisture but only at very coarse spatial resolutions. Imagery from the Airborne Visible / Infrared Imaging Spectrometer (AVIRIS) has the potential to allow better spatial and temporal monitoring of soil moisture. This study established a relationship between plant available water and hyperspectral reflectance via linear regressions of data from 2013-2015 for two grassland field sites: 1) near Santa Barbara, California, at Coal Oil Point Reserve (COPR) and 2) Airstrip station (AIRS) at UC Santa Barbara's Sedgwick Reserve near Santa Ynez, California. Volumetric soil moisture measurements at 10 cm and 20 cm depths were provided by meteorological stations situated in COPR and AIRS while reflectance data were extracted from AVIRIS. We found strong correlations between plant available water and bands centered at wavelengths 704 nm and 831 nm, which we used to create Hyperspectral Soil Moisture Index (HSMI): 0.38((ρ831-ρ704)/(ρ831+ρ704))-0.02. HSMI demonstrated a coefficient of determination (R2) of 0.71 for linear regressions of reflectance versus plant available water with a lag time of 28 days. We applied HSMI to the AIRS and COPR grasslands for 2011 AVIRIS scenes. Plant available water values predicted by HSMI were 0.039 higher at AIRS and 0.048 higher at COPR than the field measurements at the sites. Differences in grass species, soil composition, and climate between COPR and AIRS likely contributed to the errors in the soil moisture predicted by HSMI.

Seasonal and Inter-Annual Patterns of Phytoplankton Community Structure in Monterey Bay, CA Derived from AVIRIS Data During the 2013-2015 HyspIRI Airborne Campaign

NASA Astrophysics Data System (ADS)

Palacios, S. L.; Thompson, D. R.; Kudela, R. M.; Negrey, K.; Guild, L. S.; Gao, B. C.; Green, R. O.; Torres-Perez, J. L.

2015-12-01

There is a need in the ocean color community to discriminate among phytoplankton groups within the bulk chlorophyll pool to understand ocean biodiversity, to track energy flow through ecosystems, and to identify and monitor for harmful algal blooms. Imaging spectrometer measurements enable use of sophisticated spectroscopic algorithms for applications such as differentiating among coral species, evaluating iron stress of phytoplankton, and discriminating phytoplankton taxa. These advanced algorithms rely on the fine scale, subtle spectral shape of the atmospherically corrected remote sensing reflectance (Rrs) spectrum of the ocean surface. As a consequence, these algorithms are sensitive to inaccuracies in the retrieved Rrs spectrum that may be related to the presence of nearby clouds, inadequate sensor calibration, low sensor signal-to-noise ratio, glint correction, and atmospheric correction. For the HyspIRI Airborne Campaign, flight planning considered optimal weather conditions to avoid flights with significant cloud/fog cover. Although best suited for terrestrial targets, the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) has enough signal for some coastal chlorophyll algorithms and meets sufficient calibration requirements for most channels. However, the coastal marine environment has special atmospheric correction needs due to error that may be introduced by aerosols and terrestrially sourced atmospheric dust and riverine sediment plumes. For this HyspIRI campaign, careful attention has been given to the correction of AVIRIS imagery of the Monterey Bay to optimize ocean Rrs retrievals for use in estimating chlorophyll (OC3 algorithm) and phytoplankton functional type (PHYDOTax algorithm) data products. This new correction method has been applied to several image collection dates during two oceanographic seasons - upwelling and the warm, stratified oceanic period for 2013 and 2014. These two periods are dominated by either diatom blooms (occasionally toxic) or red tides. Results presented include chlorophyll and phytoplankton community structure and in-water validation data for these dates during these two seasons.

Airborne Hyperspectral Imagery for the Detection of Agricultural Crop Stress

NASA Technical Reports Server (NTRS)

Cassady, Philip E.; Perry, Eileen M.; Gardner, Margaret E.; Roberts, Dar A.

2001-01-01

Multispectral digital imagery from aircraft or satellite is presently being used to derive basic assessments of crop health for growers and others involved in the agricultural industry. Research indicates that narrow band stress indices derived from hyperspectral imagery should have improved sensitivity to provide more specific information on the type and cause of crop stress, Under funding from the NASA Earth Observation Commercial Applications Program (EOCAP) we are identifying and evaluating scientific and commercial applications of hyperspectral imagery for the remote characterization of agricultural crop stress. During the summer of 1999 a field experiment was conducted with varying nitrogen treatments on a production corn-field in eastern Nebraska. The AVIRIS (Airborne Visible-Infrared Imaging Spectrometer) hyperspectral imager was flown at two critical dates during crop development, at two different altitudes, providing images with approximately 18m pixels and 3m pixels. Simultaneous supporting soil and crop characterization included spectral reflectance measurements above the canopy, biomass characterization, soil sampling, and aerial photography. In this paper we describe the experiment and results, and examine the following three issues relative to the utility of hyperspectral imagery for scientific study and commercial crop stress products: (1) Accuracy of reflectance derived stress indices relative to conventional measures of stress. We compare reflectance-derived indices (both field radiometer and AVIRIS) with applied nitrogen and with leaf level measurement of nitrogen availability and chlorophyll concentrations over the experimental plots (4 replications of 5 different nitrogen levels); (2) Ability of the hyperspectral sensors to detect sub-pixel areas under crop stress. We applied the stress indices to both the 3m and 18m AVIRIS imagery for the entire production corn field using several sub-pixel areas within the field to compare the relative sensitivity of each stress index; and (3) Comparative sensitivity of stress indices to realistic measurement uncertainties. We compare the stress indices calculated with several levels of spectral uncertainty (by shifting the wavelengths) and reflectance uncertainty (by systematically varying the reflectance retrieval code initialization).

A Simple Spreadsheet Program to Simulate and Analyze the Far-UV Circular Dichroism Spectra of Proteins

ERIC Educational Resources Information Center

Abriata, Luciano A.

2011-01-01

A simple algorithm was implemented in a spreadsheet program to simulate the circular dichroism spectra of proteins from their secondary structure content and to fit [alpha]-helix, [beta]-sheet, and random coil contents from experimental far-UV circular dichroism spectra. The physical basis of the method is briefly reviewed within the context of…

An Axisymmetric, Hydrodynamical Model for the Torus Wind in Active Galactic Nuclei

NASA Technical Reports Server (NTRS)

Dorodnitsyn, A.; Kallman, T.; Proga, D.

2008-01-01

We report on time-dependent axisymmetric simulations of an X-ray-excited flow from a parsec-scale, rotating, cold torus around an active galactic nucleus. Our simulations account for radiative heating and cooling and radiation pressure force. The simulations follow the development of a broad biconical outflow induced mainly by X-ray heating. We compute synthetic spectra predicted by our simulations. The wind characteristics and the spectra support the hypothesis that a rotationally supported torus can serve as the source of a wind which is responsible for the warm absorber gas observed in the X-ray spectra of many Seyfert galaxies.

Simulations of the infrared, Raman, and 2D-IR photon echo spectra of water in nanoscale silica pores

DOE PAGES

Burris, Paul C.; Laage, Damien; Thompson, Ward H.

2016-05-20

Vibrational spectroscopy is frequently used to characterize nanoconfined liquids and probe the effect of the confining framework on the liquid structure and dynamics relative to the corresponding bulk fluid. However, it is still unclear what molecular-level information can be obtained from such measurements. In this Paper, we address this question by using molecular dynamics (MD) simulations to reproduce the linear infrared (IR), Raman, and two-dimensional IR (2D-IR) photon echo spectra for water confined within hydrophilic (hydroxyl-terminated) silica mesopores. To simplify the spectra the OH stretching region of isotopically dilute HOD in D 2O is considered. An empirical mapping approach ismore » used to obtain the OH vibrational frequencies, transition dipoles, and transition polarizabilities from the MD simulations. The simulated linear IR and Raman spectra are in good general agreement with measured spectra of water in mesoporous silica reported in the literature. The key effect of confinement on the water spectrum is a vibrational blueshift for OH groups that are closest to the pore interface. The blueshift can be attributed to the weaker hydrogen bonds (H-bonds) formed between the OH groups and silica oxygen acceptors. Non-Condon effects greatly diminish the contribution of these OH moieties to the linear IR spectrum, but these weaker H-bonds are readily apparent in the Raman spectrum. The 2D-IR spectra have not yet been measured and thus the present results represent a prediction. Lastly, the simulated spectra indicate that it should be possible to probe the slower spectral diffusion of confined water compared to the bulk liquid by analysis of the 2D-IR spectra.« less

Simulations of the infrared, Raman, and 2D-IR photon echo spectra of water in nanoscale silica pores.

PubMed

Burris, Paul C; Laage, Damien; Thompson, Ward H

2016-05-21

Vibrational spectroscopy is frequently used to characterize nanoconfined liquids and probe the effect of the confining framework on the liquid structure and dynamics relative to the corresponding bulk fluid. However, it is still unclear what molecular-level information can be obtained from such measurements. In this paper, we address this question by using molecular dynamics (MD) simulations to reproduce the linear infrared (IR), Raman, and two-dimensional IR (2D-IR) photon echo spectra for water confined within hydrophilic (hydroxyl-terminated) silica mesopores. To simplify the spectra the OH stretching region of isotopically dilute HOD in D2O is considered. An empirical mapping approach is used to obtain the OH vibrational frequencies, transition dipoles, and transition polarizabilities from the MD simulations. The simulated linear IR and Raman spectra are in good general agreement with measured spectra of water in mesoporous silica reported in the literature. The key effect of confinement on the water spectrum is a vibrational blueshift for OH groups that are closest to the pore interface. The blueshift can be attributed to the weaker hydrogen bonds (H-bonds) formed between the OH groups and silica oxygen acceptors. Non-Condon effects greatly diminish the contribution of these OH moieties to the linear IR spectrum, but these weaker H-bonds are readily apparent in the Raman spectrum. The 2D-IR spectra have not yet been measured and thus the present results represent a prediction. The simulated spectra indicates that it should be possible to probe the slower spectral diffusion of confined water compared to the bulk liquid by analysis of the 2D-IR spectra.

Simulations of the infrared, Raman, and 2D-IR photon echo spectra of water in nanoscale silica pores

DOE Office of Scientific and Technical Information (OSTI.GOV)

Burris, Paul C.; Thompson, Ward H., E-mail: wthompson@ku.edu; Laage, Damien, E-mail: damien.laage@ens.fr

2016-05-21

Vibrational spectroscopy is frequently used to characterize nanoconfined liquids and probe the effect of the confining framework on the liquid structure and dynamics relative to the corresponding bulk fluid. However, it is still unclear what molecular-level information can be obtained from such measurements. In this paper, we address this question by using molecular dynamics (MD) simulations to reproduce the linear infrared (IR), Raman, and two-dimensional IR (2D-IR) photon echo spectra for water confined within hydrophilic (hydroxyl-terminated) silica mesopores. To simplify the spectra the OH stretching region of isotopically dilute HOD in D{sub 2}O is considered. An empirical mapping approach ismore » used to obtain the OH vibrational frequencies, transition dipoles, and transition polarizabilities from the MD simulations. The simulated linear IR and Raman spectra are in good general agreement with measured spectra of water in mesoporous silica reported in the literature. The key effect of confinement on the water spectrum is a vibrational blueshift for OH groups that are closest to the pore interface. The blueshift can be attributed to the weaker hydrogen bonds (H-bonds) formed between the OH groups and silica oxygen acceptors. Non-Condon effects greatly diminish the contribution of these OH moieties to the linear IR spectrum, but these weaker H-bonds are readily apparent in the Raman spectrum. The 2D-IR spectra have not yet been measured and thus the present results represent a prediction. The simulated spectra indicates that it should be possible to probe the slower spectral diffusion of confined water compared to the bulk liquid by analysis of the 2D-IR spectra.« less

Using radiative transfer models to study the atmospheric water vapor content and to eliminate telluric lines from high-resolution optical spectra

NASA Astrophysics Data System (ADS)

Gardini, A.; Maíz Apellániz, J.; Pérez, E.; Quesada, J. A.; Funke, B.

2013-05-01

The Radiative Transfer Model (RTM) and the retrieval algorithm, incorporated in the SCIATRAN 2.2 software package developed at the Institute of Remote Sensing/Institute of Enviromental Physics of Bremen University (Germany), allows to simulate, among other things, radiance/irradiance spectra in the 2400--24 000 Å range. In this work we present applications of RTM to two case studies. In the first case the RTM was used to simulate direct solar irradiance spectra, with different water vapor amounts, for the study of the water vapor content in the atmosphere above Sierra Nevada Observatory. Simulated spectra were compared with those measured with a spectrometer operating in the 8000--10 000 Å range. In the second case the RTM was used to generate telluric model spectra to subtract the atmospheric contribution and correct high-resolution stellar spectra from atmospheric water vapor and oxygen lines. The results of both studies are discussed.

Unified analysis of optical absorption spectra of carotenoids based on a stochastic model.

PubMed

Uragami, Chiasa; Saito, Keisuke; Yoshizawa, Masayuki; Molnár, Péter; Hashimoto, Hideki

2018-05-03

The chemical structures of the carotenoid molecules are very simple and one might think that the electronic feature of it is easily predicted. However, it still has so much unknown information except the correlation between the electronic energy state and the length of effective conjugation chain of carotenoids. To investigate the electronic feature of the carotenoids, the most essential method is measuring the optical absorption spectra, but simulating it from the resonance Raman spectra is also the effective way. From this reason, we studied the optical absorption spectra as well as resonance Raman spectra of 15 different kinds of cyclic carotenoid molecules, recorded in tetrahydrofuran (THF) solutions at room temperature. The whole band shapes of the absorption spectra of all these carotenoid molecules were successfully simulated based on a stochastic model using Brownian oscillators. The parameters obtained from the simulation made it possible to discuss the intermolecular interaction between carotenoids and solvent THF molecules quantitatively. Copyright © 2018. Published by Elsevier Inc.

Comparison of simulated and measured spectra from an X-ray tube for the energies between 20 and 35 keV

NASA Astrophysics Data System (ADS)

Yücel, M.; Emirhan, E.; Bayrak, A.; Ozben, C. S.; Yücel, E. Barlas

2015-11-01

Design and production of a simple and low cost X-ray imaging system that can be used for light industrial applications was targeted in the Nuclear Physics Laboratory of Istanbul Technical University. In this study, production, transmission and detection of X-rays were simulated for the proposed imaging device. OX/70-P dental tube was used and X-ray spectra simulated by Geant4 were validated by comparison with X-ray spectra measured between 20 and 35 keV. Relative detection efficiency of the detector was also determined to confirm the physics processes used in the simulations. Various time optimization tools were performed to reduce the simulation time.

The composite load spectra project

NASA Technical Reports Server (NTRS)

Newell, J. F.; Ho, H.; Kurth, R. E.

1990-01-01

Probabilistic methods and generic load models capable of simulating the load spectra that are induced in space propulsion system components are being developed. Four engine component types (the transfer ducts, the turbine blades, the liquid oxygen posts and the turbopump oxidizer discharge duct) were selected as representative hardware examples. The composite load spectra that simulate the probabilistic loads for these components are typically used as the input loads for a probabilistic structural analysis. The knowledge-based system approach used for the composite load spectra project provides an ideal environment for incremental development. The intelligent database paradigm employed in developing the expert system provides a smooth coupling between the numerical processing and the symbolic (information) processing. Large volumes of engine load information and engineering data are stored in database format and managed by a database management system. Numerical procedures for probabilistic load simulation and database management functions are controlled by rule modules. Rules were hard-wired as decision trees into rule modules to perform process control tasks. There are modules to retrieve load information and models. There are modules to select loads and models to carry out quick load calculations or make an input file for full duty-cycle time dependent load simulation. The composite load spectra load expert system implemented today is capable of performing intelligent rocket engine load spectra simulation. Further development of the expert system will provide tutorial capability for users to learn from it.

Trident: A Universal Tool for Generating Synthetic Absorption Spectra from Astrophysical Simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hummels, Cameron B.; Smith, Britton D.; Silvia, Devin W.

Hydrodynamical simulations are increasingly able to accurately model physical systems on stellar, galactic, and cosmological scales; however, the utility of these simulations is often limited by our ability to directly compare them with the data sets produced by observers: spectra, photometry, etc. To address this problem, we have created trident, a Python-based open-source tool for post-processing hydrodynamical simulations to produce synthetic absorption spectra and related data. trident can (i) create absorption-line spectra for any trajectory through a simulated data set mimicking both background quasar and down-the-barrel configurations; (ii) reproduce the spectral characteristics of common instruments like the Cosmic Origins Spectrograph;more » (iii) operate across the ultraviolet, optical, and infrared using customizable absorption-line lists; (iv) trace simulated physical structures directly to spectral features; (v) approximate the presence of ion species absent from the simulation outputs; (vi) generate column density maps for any ion; and (vii) provide support for all major astrophysical hydrodynamical codes. trident was originally developed to aid in the interpretation of observations of the circumgalactic medium and intergalactic medium, but it remains a general tool applicable in other contexts.« less

Computing the Absorption and Emission Spectra of 5-Methylcytidine in Different Solvents: A Test-Case for Different Solvation Models.

PubMed

Martínez-Fernández, L; Pepino, A J; Segarra-Martí, J; Banyasz, A; Garavelli, M; Improta, R

2016-09-13

The optical spectra of 5-methylcytidine in three different solvents (tetrahydrofuran, acetonitrile, and water) is measured, showing that both the absorption and the emission maximum in water are significantly blue-shifted (0.08 eV). The absorption spectra are simulated based on CAM-B3LYP/TD-DFT calculations but including solvent effects with three different approaches: (i) a hybrid implicit/explicit full quantum mechanical approach, (ii) a mixed QM/MM static approach, and (iii) a QM/MM method exploiting the structures issuing from molecular dynamics classical simulations. Ab-initio Molecular dynamics simulations based on CAM-B3LYP functionals have also been performed. The adopted approaches all reproduce the main features of the experimental spectra, giving insights on the chemical-physical effects responsible for the solvent shifts in the spectra of 5-methylcytidine and providing the basis for discussing advantages and limitations of the adopted solvation models.

Theoretical study on the anion photoelectron spectra of Ln(COT)2- including the spin-orbit effects

NASA Astrophysics Data System (ADS)

Nakajo, Erika; Yabushita, Satoshi

2017-06-01

The multiplet level splittings for both anion and neutral sandwich complexes Ln(COT)2 (Ln = Ce-Yb, COT = 1,3,5,7-cyclooctatetraene) were calculated with spin-orbit interactions to analyze their anion photoelectron spectra. The theoretically simulated spectra obtained with these energies and the pole strengths are generally consistent with the experimental spectra for the X peak. The magnitudes of the energy splittings, relative peak intensities, and their Ln dependence are reproduced. In comparison to our previous calculations, the inclusion of spin-orbit interactions with the SO-MCQDPT2 method makes the simulated spectra more consistent with the results of the experiment.

Simulations of Effects of Nanophase Iron Space Weather Products on Lunar Regolith Reflectance Spectra

NASA Astrophysics Data System (ADS)

Escobar-Cerezo, J.; Penttilä, A.; Kohout, T.; Muñoz, O.; Moreno, F.; Muinonen, K.

2018-01-01

Lunar soil spectra differ from pulverized lunar rocks spectra by reddening and darkening effects, and shallower absorption bands. These effects have been described in the past as a consequence of space weathering. In this work, we focus on the effects of nanophase iron (npFe0) inclusions on the experimental reflectance spectra of lunar regolith particles. The reflectance spectra are computed using SIRIS3, a code that combines ray optics with radiative-transfer modeling to simulate light scattering by different types of scatterers. The imaginary part of the refractive index as a function of wavelength of immature lunar soil is derived by comparison with the measured spectra of the corresponding material. Furthermore, the effect of adding nanophase iron inclusions on the reflectance spectra is studied. The computed spectra qualitatively reproduce the observed effects of space weathered lunar regolith.

A method to reproduce alpha-particle spectra measured with semiconductor detectors.

PubMed

Timón, A Fernández; Vargas, M Jurado; Sánchez, A Martín

2010-01-01

A method is proposed to reproduce alpha-particle spectra measured with silicon detectors, combining analytical and computer simulation techniques. The procedure includes the use of the Monte Carlo method to simulate the tracks of alpha-particles within the source and in the detector entrance window. The alpha-particle spectrum is finally obtained by the convolution of this simulated distribution and the theoretical distributions representing the contributions of the alpha-particle spectrometer to the spectrum. Experimental spectra from (233)U and (241)Am sources were compared with the predictions given by the proposed procedure, showing good agreement. The proposed method can be an important aid for the analysis and deconvolution of complex alpha-particle spectra. Copyright 2009 Elsevier Ltd. All rights reserved.

PGOPHER: A program for simulating rotational, vibrational and electronic spectra

NASA Astrophysics Data System (ADS)

Western, Colin M.

2017-01-01

The PGOPHER program is a general purpose program for simulating and fitting molecular spectra, particularly the rotational structure. The current version can handle linear molecules, symmetric tops and asymmetric tops and many possible transitions, both allowed and forbidden, including multiphoton and Raman spectra in addition to the common electric dipole absorptions. Many different interactions can be included in the calculation, including those arising from electron and nuclear spin, and external electric and magnetic fields. Multiple states and interactions between them can also be accounted for, limited only by available memory. Fitting of experimental data can be to line positions (in many common formats), intensities or band contours and the parameters determined can be level populations as well as rotational constants. PGOPHER is provided with a powerful and flexible graphical user interface to simplify many of the tasks required in simulating, understanding and fitting molecular spectra, including Fortrat diagrams and energy level plots in addition to overlaying experimental and simulated spectra. The program is open source, and can be compiled with open source tools. This paper provides a formal description of the operation of version 9.1.

CLARREO shortwave observing system simulation experiments of the twenty-first century: Simulator design and implementation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Feldman, D.R.; Algieri, C.A.; Ong, J.R.

2011-04-01

Projected changes in the Earth system will likely be manifested in changes in reflected solar radiation. This paper introduces an operational Observational System Simulation Experiment (OSSE) to calculate the signals of future climate forcings and feedbacks in top-of-atmosphere reflectance spectra. The OSSE combines simulations from the Intergovernmental Panel on Climate Change (IPCC) Fourth Assessment Report for the NCAR Community Climate System Model (CCSM) with the MODTRAN radiative transfer code to calculate reflectance spectra for simulations of current and future climatic conditions over the 21st century. The OSSE produces narrowband reflectances and broadband fluxes, the latter of which have been extensivelymore » validated against archived CCSM results. The shortwave reflectance spectra contain atmospheric features including signals from water vapor, liquid and ice clouds, and aerosols. The spectra are also strongly influenced by the surface bidirectional reflectance properties of predicted snow and sea ice and the climatological seasonal cycles of vegetation. By comparing and contrasting simulated reflectance spectra based on emissions scenarios with increasing projected and fixed present-day greenhouse gas and aerosol concentrations, we find that prescribed forcings from increases in anthropogenic sulfate and carbonaceous aerosols are detectable and are spatially confined to lower latitudes. Also, changes in the intertropical convergence zone and poleward shifts in the subsidence zones and the storm tracks are all detectable along with large changes in snow cover and sea ice fraction. These findings suggest that the proposed NASA Climate Absolute Radiance and Refractivity Observatory (CLARREO) mission to measure shortwave reflectance spectra may help elucidate climate forcings, responses, and feedbacks.« less

Assessment of electron propagator methods for the simulation of vibrationally-resolved valence and core photoionization spectra

PubMed Central

Baiardi, A.; Paoloni, L.; Barone, V.; Zakrzewski, V.G.; Ortiz, J.V.

2017-01-01

The analysis of photoelectron spectra is usually facilitated by quantum mechanical simulations. Due to the recent improvement of experimental techniques, the resolution of experimental spectra is rapidly increasing, and the inclusion of vibrational effects is usually mandatory to obtain a reliable reproduction of the spectra. With the aim of defining a robust computational protocol, a general time-independent formulation to compute different kinds of vibrationally-resolved electronic spectra has been generalized to support also photoelectron spectroscopy. The electronic structure data underlying the simulation are computed using different electron propagator approaches. In addition to the more standard approaches, a new and robust implementation of the second-order self-energy approximation of the electron propagator based on a transition operator reference (TOEP2) is presented. To validate our implementation, a series of molecules has been used as test cases. The result of the simulations shows that, for ultraviolet photoionization spectra, the more accurate non-diagonal approaches are needed to obtain a reliable reproduction of vertical ionization energies, but diagonal approaches are sufficient for energy gradients and pole strengths. For X-ray photoelectron spectroscopy, the TOEP2 approach, besides being more efficient, is also the most accurate in the reproduction of both vertical ionization energies and vibrationally-resolved bandshapes. PMID:28521087

Simulation of wave propagation in three-dimensional random media

NASA Astrophysics Data System (ADS)

Coles, Wm. A.; Filice, J. P.; Frehlich, R. G.; Yadlowsky, M.

1995-04-01

Quantitative error analyses for the simulation of wave propagation in three-dimensional random media, when narrow angular scattering is assumed, are presented for plane-wave and spherical-wave geometry. This includes the errors that result from finite grid size, finite simulation dimensions, and the separation of the two-dimensional screens along the propagation direction. Simple error scalings are determined for power-law spectra of the random refractive indices of the media. The effects of a finite inner scale are also considered. The spatial spectra of the intensity errors are calculated and compared with the spatial spectra of

Trajectory analysis of low-energy and hyperthermal ions scattered from Cu(110)

DOE Office of Scientific and Technical Information (OSTI.GOV)

McEachern, R.L.; Goodstein, D.M.; Cooper, B.H.

1989-05-15

Trajectories of Na{sup +} ions scattered from the Cu(110) surface in the <1 1bar 0> and <001> azimuths were studied for a range of incident energies from 56 eV to 4 keV. The goal is to explain the trends observed in the energy spectra and determine what types of trajectories contribute to these spectra. Using the computer program SAFARI, simulations were performed with trajectory analyses for 100-, 200-, and 400-eV scattering. We show results from the 100-eV simulations in both azimuths and compare them with the experimental data. The simulated energy spectra are in excellent agreement with the data. Ionmore » trajectories and impact parameter plots from the simulations are used to determine the relative importance of different types of ion-surface-atom collisions. The simulations have shown that the striking differences observed in comparing the <1 1bar 0> and <001> spectra are mostly due to ions which scatter from second-layer atoms. This system exhibits strong focusing onto the second-layer atoms by the first-layer rows, and the focusing is very sensitive to the spacing between the rows. At the lower beam energies, scattering from the second layer dominates the measured spectra.« less

Trajectory analysis of low-energy and hyperthermal ions scattered from Cu(110)

DOE Office of Scientific and Technical Information (OSTI.GOV)

McEachern, R. L.; Goodstein, D. M.; Cooper, B. H.

1989-05-15

We have investigated the trajectories of Na/sup +/ ions scattered from the Cu(110) surface in the <1/bar 1/0> and <001> azimuths for a range of incident energies from 56 eV to 4 keV. Our goal is to explain the trends observed in the energy spectra and determine what types of trajectories contribute to these spectra. Using the computer program SAFARI, we have performed simulations with trajectory analyses for 100-, 200-, and 400-eV scattering. We show results from the 100-eV simulations in both azimuths and compare them with the experimental data. The simulated energy spectra are in excellent agreement with themore » data. Ion trajectories and impact parameter plots from the simulations are used to determine the relative importance of different types of ion--surface-atom collisions. The simulations have shown that the striking differences observed in comparing the <1/bar 1/0> and <001> spectra are mostly due to ions which scatter from second-layer atoms. This system exhibits strong focusing onto the second-layer atoms by the first-layer rows, and the focusing is very sensitive to the spacing between the rows. At the lower beam energies, scattering from the second layer dominates the measured spectra.« less

On the creation of high spatial resolution imaging spectroscopy data from multi-temporal low spatial resolution imagery

NASA Astrophysics Data System (ADS)

Yao, Wei; van Aardt, Jan; Messinger, David

2017-05-01

The Hyperspectral Infrared Imager (HyspIRI) mission aims to provide global imaging spectroscopy data to the benefit of especially ecosystem studies. The onboard spectrometer will collect radiance spectra from the visible to short wave infrared (VSWIR) regions (400-2500 nm). The mission calls for fine spectral resolution (10 nm band width) and as such will enable scientists to perform material characterization, species classification, and even sub-pixel mapping. However, the global coverage requirement results in a relatively low spatial resolution (GSD 30m), which restricts applications to objects of similar scales. We therefore have focused on the assessment of sub-pixel vegetation structure from spectroscopy data in past studies. In this study, we investigate the development or reconstruction of higher spatial resolution imaging spectroscopy data via fusion of multi-temporal data sets to address the drawbacks implicit in low spatial resolution imagery. The projected temporal resolution of the HyspIRI VSWIR instrument is 15 days, which implies that we have access to as many as six data sets for an area over the course of a growth season. Previous studies have shown that select vegetation structural parameters, e.g., leaf area index (LAI) and gross ecosystem production (GEP), are relatively constant in summer and winter for temperate forests; we therefore consider the data sets collected in summer to be from a similar, stable forest structure. The first step, prior to fusion, involves registration of the multi-temporal data. A data fusion algorithm then can be applied to the pre-processed data sets. The approach hinges on an algorithm that has been widely applied to fuse RGB images. Ideally, if we have four images of a scene which all meet the following requirements - i) they are captured with the same camera configurations; ii) the pixel size of each image is x; and iii) at least r2 images are aligned on a grid of x/r - then a high-resolution image, with a pixel size of x/r, can be reconstructed from the multi-temporal set. The algorithm was applied to data from NASA's classic Airborne Visible and Infrared Imaging Spectrometer (AVIRIS-C; GSD 18m), collected between 2013-2015 (summer and fall) over our study area (NEON's Southwest Pacific Domain; Fresno, CA) to generate higher spatial resolution imagery (GSD 9m). The reconstructed data set was validated via comparison to NEON's imaging spectrometer (NIS) data (GSD 1m). The results showed that algorithm worked well with the AVIRIS-C data and could be applied to the HyspIRI data.

Simulation of femtosecond two-dimensional electronic spectra of conical intersections

DOE Office of Scientific and Technical Information (OSTI.GOV)

Krčmář, Jindřich; Gelin, Maxim F.; Domcke, Wolfgang

2015-08-21

We have simulated femtosecond two-dimensional (2D) electronic spectra for an excited-state conical intersection using the wave-function version of the equation-of-motion phase-matching approach. We show that 2D spectra at fixed values of the waiting time provide information on the structure of the vibronic eigenstates of the conical intersection, while the evolution of the spectra with the waiting time reveals predominantly ground-state wave-packet dynamics. The results show that 2D spectra of conical intersection systems differ significantly from those obtained for chromophores with well separated excited-state potential-energy surfaces. The spectral signatures which can be attributed to conical intersections are discussed.

Analytical functions to predict cosmic-ray neutron spectra in the atmosphere.

PubMed

Sato, Tatsuhiko; Niita, Koji

2006-09-01

Estimation of cosmic-ray neutron spectra in the atmosphere has been an essential issue in the evaluation of the aircrew doses and the soft-error rates of semiconductor devices. We therefore performed Monte Carlo simulations for estimating neutron spectra using the PHITS code in adopting the nuclear data library JENDL-High-Energy file. Excellent agreements were observed between the calculated and measured spectra for a wide altitude range even at the ground level. Based on a comprehensive analysis of the simulation results, we propose analytical functions that can predict the cosmic-ray neutron spectra for any location in the atmosphere at altitudes below 20 km, considering the influences of local geometries such as ground and aircraft on the spectra. The accuracy of the analytical functions was well verified by various experimental data.

Landscape Vulnerability Analysis from Historic Lower Mississippi River Flood in 2011

NASA Astrophysics Data System (ADS)

Goodwell, A. E.; Zhu, Z.; Dutta, D.; Greenberg, J.; Kumar, P.; Garcia, M. H.; Rhoads, B. L.; Parker, G.; Berretta, D.; Holmes, R. R.

2012-12-01

This study presents the results of a landscape vulnerability analysis of the Birds Point New Madrid Floodway in southeastern Missouri. The U.S. Army Corps of Engineers intentionally inundated 500 square kilometers of agricultural floodplain in May of 2011 as an emergency flood control measure. We use pre-flood (2005) and post-flood (2011) high resolution Lidar data to establish the landscape impact of the levee breach on the floodplain. The Lidar DEMs were corrected for flight line errors using a Fourier filtering technique, and then subtracted to obtain a differential DEM of erosion and deposition patterns. We use soil erosion characteristics, AVIRIS remote sensing data, and 2D floodplain modeling to analyze the three components of vulnerability: sensitivity, exposure, and adaptive capacity. HydroSed2D (Liu, Landry and García 2008), a 2D flow model, is implemented to simulate flow depths and speeds, or flood exposure, over the entire floodway, as well as smaller sections at increased resolution using a nested grid. We classify woody vegetation based on AVIRIS remote sensing data, and represent vegetated regions in the model as varied values of the Manning's n coefficient. Soil erodibility, vegetation, topography, and flow characteristics are compared to observed landscape changes within the floodplain. Overall, the floodway showed a remarkable resilience to an extreme flood event. When compared to levee breaches on similar rivers in other floods, the lack of newly deposited sediment is noticeable and likely attributable to the presence of a substantial riparian corridor between the main channel of the Mississippi River and the floodway. Although many meander scars indicating former channels of the Mississippi River are apparent in the topography, only one, known as O'Bryan Ridge, experienced high volumes of erosion and deposition due to the flooding. The vulnerability analysis supports the hypothesis this high impact is due to a combination of vulnerability factors such as high flow speed, few localized patches of vegetation, and high soil erodibility at this ridge compared to other similar meander scars. The methodology of this analysis can be used to locate regions of high vulnerability in future floodplain management and flood control, and mitigate potentially catastrophic landscape change.

Measurement And Calculation of High-Energy Neutron Spectra Behind Shielding at the CERF 120-GeV/C Hadron Beam Facility

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nakao, N.; /SLAC; Taniguchi, S.

Neutron energy spectra were measured behind the lateral shield of the CERF (CERN-EU High Energy Reference Field) facility at CERN with a 120 GeV/c positive hadron beam (a mixture of mainly protons and pions) on a cylindrical copper target (7-cm diameter by 50-cm long). An NE213 organic liquid scintillator (12.7-cm diameter by 12.7-cm long) was located at various longitudinal positions behind shields of 80- and 160-cm thick concrete and 40-cm thick iron. The measurement locations cover an angular range with respect to the beam axis between 13 and 133{sup o}. Neutron energy spectra in the energy range between 32 MeVmore » and 380 MeV were obtained by unfolding the measured pulse height spectra with the detector response functions which have been verified in the neutron energy range up to 380 MeV in separate experiments. Since the source term and experimental geometry in this experiment are well characterized and simple and results are given in the form of energy spectra, these experimental results are very useful as benchmark data to check the accuracies of simulation codes and nuclear data. Monte Carlo simulations of the experimental set up were performed with the FLUKA, MARS and PHITS codes. Simulated spectra for the 80-cm thick concrete often agree within the experimental uncertainties. On the other hand, for the 160-cm thick concrete and iron shield differences are generally larger than the experimental uncertainties, yet within a factor of 2. Based on source term simulations, observed discrepancies among simulations of spectra outside the shield can be partially explained by differences in the high-energy hadron production in the copper target.« less

Variations in AmLi source spectra and their estimation utilizing the 5 Ring Multiplicity Counter

NASA Astrophysics Data System (ADS)

Weinmann-Smith, R.; Beddingfield, D. H.; Enqvist, A.; Swinhoe, M. T.

2017-06-01

Active-mode assay systems are widely used for the safeguards of uranium items to verify compliance with the Non-Proliferation Treaty. Systems such as the Active-Well Coincidence Counter (AWCC) and the Uranium Neutron Coincidence Collar (UNCL) use americium-lithium (AmLi) neutron sources to induce fissions which are measured to determine the sample mass. These systems have historically relied on calibrations derived from well-defined standards. Recently, restricted access to standards or more difficult measurements have resulted in a reliance on modeling and simulation for the calibration of systems, which introduces potential simulation biases. The AmLi source energy spectra commonly used in the safeguards community do not accurately represent measurement results and the spectrum uncertainty can represent a large contribution to the total modeling uncertainty in active-mode systems. The 5-Ring Multiplicity Counter (5RMC) has been used to measure 17 AmLi sources. The measurements showed a significant spectral variation between different sources. Utilization of a spectrum that is specific to an individual source or a series of sources will give improved results over historical general spectra when modeling AmLi sources. Candidate AmLi neutron spectra were calculated in MCNP and SOURCES4C for a range of physical AmLi characteristics. The measurement and simulation data were used to fit reliable and accurate AmLi spectra for use in the simulation of active-mode systems. Spectra were created for average Gammatron C, Gammatron N, and MRC series sources, and for individual sources. The systematic uncertainty introduced by physical aspects of the AmLi source were characterized through simulations. The accuracy of spectra from the literature was compared.

Using AVIRIS to assess hemlock abundance and early decline in the Catskills, New York

Treesearch

Jennifer Pontius; Richard Hallett; Mary Martin

2005-01-01

In order to aid land managers in monitoring and controlling the ongoing hemlock woolly adelgid outbreak, more accurate landscape scale tools are required to locate the hemlock resource, identify infestation and spot early decline. To this end, NASA's Airborne Visible Infra-red Imaging Spectrometer was flown over the infestation front in the Catskills region of New...

Spectral and radiometric calibration of the Airborne Visible/Infrared Imaging Spectrometer

NASA Technical Reports Server (NTRS)

Vane, Gregg; Chrien, Thomas G.; Miller, Edward A.; Reimer, John H.

1987-01-01

The laboratory spectral and radiometric calibration of the AVIRIS science data collected since 1987 is described. The instrumentation and procedures used in the calibration are discussed and the accuracy achieved in the laboratory as determined by measurement and calculation is compared with the requirements. Instrument performance factors affecting radiometry are described. The paper concludes with a discussion of future plans.

A Modular Implementation for the Simulation of 1D and 2D Solid-State NMR Spectra of Quadrupolar Nuclei in the Virtual Multifrequency Spectrometer-Draw Graphical Interface.

PubMed

Presti, Davide; Pedone, Alfonso; Licari, Daniele; Barone, Vincenzo

2017-05-09

We present the implementation of the solid state (SoS)NMR module for the simulation of several 1D and 2D NMR spectra of all the elements in the periodic table in the virtual multifrequency spectrometer (VMS). This module is fully integrated with the graphical user interface of VMS (VMS-Draw) [Licari et al., J. Comput. Chem. 36, 2015, 321-334], a freeware tool which allows a user-friendly handling of structures and analyses of advanced spectroscopical properties of chemical compounds-from model systems to real-world applications. Besides the numerous modules already available in VMS for the study of electronic, optical, vibrational, vibronic, and EPR properties, here the simulation of NMR spectra is presented with a particular emphasis on those techniques usually employed to investigate solid state systems. The SoSNMR module benefits from its ability to work under both periodic and nonperiodic conditions, such that small molecules/molecular clusters can be treated, as well as extended three-dimensional systems enforcing (or not) translational periodicity. These features allow VMS to simulate spectra resulting from NMR calculations by some popular quantum chemistry codes, namely Gaussian09/16, Castep, and Quantum Espresso. The effectiveness of the SoSNMR module of VMS is examined throughout the manuscript, and applied to simulate 1D static, MAS, and VAS NMR spectra as well as 2D correlation (90°, MAS) and MQMAS spectra of active NMR nuclei embedded in different amorphous and crystalline systems of actual interest in chemistry and material science. Finally, the program is able to simulate the spectra of both the total ensemble of spin-active nuclei present in the system and of subensembles differentiated depending on the chemical environment of the first and second coordination sphere in a very general way applicable to any kind of systems.

Using hyperspectral remote sensing for land cover classification

NASA Astrophysics Data System (ADS)

Zhang, Wendy W.; Sriharan, Shobha

2005-01-01

This project used hyperspectral data set to classify land cover using remote sensing techniques. Many different earth-sensing satellites, with diverse sensors mounted on sophisticated platforms, are currently in earth orbit. These sensors are designed to cover a wide range of the electromagnetic spectrum and are generating enormous amounts of data that must be processed, stored, and made available to the user community. The Airborne Visible-Infrared Imaging Spectrometer (AVIRIS) collects data in 224 bands that are approximately 9.6 nm wide in contiguous bands between 0.40 and 2.45 mm. Hyperspectral sensors acquire images in many, very narrow, contiguous spectral bands throughout the visible, near-IR, and thermal IR portions of the spectrum. The unsupervised image classification procedure automatically categorizes the pixels in an image into land cover classes or themes. Experiments on using hyperspectral remote sensing for land cover classification were conducted during the 2003 and 2004 NASA Summer Faculty Fellowship Program at Stennis Space Center. Research Systems Inc.'s (RSI) ENVI software package was used in this application framework. In this application, emphasis was placed on: (1) Spectrally oriented classification procedures for land cover mapping, particularly, the supervised surface classification using AVIRIS data; and (2) Identifying data endmembers.

Properties of the water column and bottom derived from Airborne Visible Infrared Imaging Spectrometer (AVIRIS) data

NASA Astrophysics Data System (ADS)

Lee, Zhongping; Carder, Kendall L.; Chen, Robert F.; Peacock, Thomas G.

2001-06-01

Using Airborne Visible Infrared Imaging Spectrometer (AVIRIS) data as an example, we show in this study that the properties of the water column and bottom of a large, shallow area can be adequately retrieved using a model-driven optimization technique. The simultaneously derived properties include bottom depth, bottom albedo, and water absorption and backscattering coefficients, which in turn could be used to derive concentrations of chlorophyll, dissolved organic matter, and suspended sediments in the water column. The derived bottom depths were compared with a bathymetry chart and a boat survey and were found to agree very well. Also, the derived bottom albedo image shows clear spatial patterns, with end-members consistent with sand and seagrass. The image of absorption and backscattering coefficients indicates that the water is quite horizontally mixed. Without bottom corrections, chlorophyll a retrievals were ˜50 mg m-3, while the retrievals after bottom corrections were tenfold less, approximating real values. These results suggest that the model and approach used work very well for the retrieval of subsurface properties of shallow-water environments even for rather turbid environments like Tampa Bay, Florida.

Simulation of wave propagation in three-dimensional random media

NASA Technical Reports Server (NTRS)

Coles, William A.; Filice, J. P.; Frehlich, R. G.; Yadlowsky, M.

1993-01-01

Quantitative error analysis for simulation of wave propagation in three dimensional random media assuming narrow angular scattering are presented for the plane wave and spherical wave geometry. This includes the errors resulting from finite grid size, finite simulation dimensions, and the separation of the two-dimensional screens along the propagation direction. Simple error scalings are determined for power-law spectra of the random refractive index of the media. The effects of a finite inner scale are also considered. The spatial spectra of the intensity errors are calculated and compared to the spatial spectra of intensity. The numerical requirements for a simulation of given accuracy are determined for realizations of the field. The numerical requirements for accurate estimation of higher moments of the field are less stringent.

Testing forward model against OCO-2 and TANSO-FTS/GOSAT observed spectra in near infrared range

NASA Astrophysics Data System (ADS)

Zadvornykh, Ilya V.; Gribanov, Konstantin G.

2015-11-01

An existing software package FIRE-ARMS (Fine InfraRed Explorer for Atmospheric Remote MeasurementS) was modified by embedding vector radiative transfer model VLIDORT. Thus the program tool includes both thermal (TIR) and near infrared (NIR) regions. We performed forward simulation of near infrared spectra on the top of the atmosphere for outgoing radiation accounting multiple scattering in cloudless atmosphere. Simulated spectra are compared with spectra measured by TANSO-FTS/GOSAT and OCO-2 in the condition of cloudless atmosphere over Western Siberia. NCEP/NCAR reanalysis data were used to complete model atmosphere.

Importance of Vibronic Effects in the UV-Vis Spectrum of the 7,7,8,8-Tetracyanoquinodimethane Anion.

PubMed

Tapavicza, Enrico; Furche, Filipp; Sundholm, Dage

2016-10-11

We present a computational method for simulating vibronic absorption spectra in the ultraviolet-visible (UV-vis) range and apply it to the 7,7,8,8-tetracyanoquinodimethane anion (TCNQ - ), which has been used as a ligand in black absorbers. Gaussian broadening of vertical electronic excitation energies of TCNQ - from linear-response time-dependent density functional theory produces only one band, which is qualitatively incorrect. Thus, the harmonic vibrational modes of the two lowest doublet states were computed, and the vibronic UV-vis spectrum was simulated using the displaced harmonic oscillator approximation, the frequency-shifted harmonic oscillator approximation, and the full Duschinsky formalism. An efficient real-time generating function method was implemented to avoid the exponential complexity of conventional Franck-Condon approaches to vibronic spectra. The obtained UV-vis spectra for TCNQ - agree well with experiment; the Duschinsky rotation is found to have only a minor effect on the spectrum. Born-Oppenheimer molecular dynamics simulations combined with calculations of the electronic excitation energies for a large number of molecular structures were also used for simulating the UV-vis spectrum. The Born-Oppenheimer molecular dynamics simulations yield a broadening of the energetically lowest peak in the absorption spectrum, but additional vibrational bands present in the experimental and simulated quantum harmonic oscillator spectra are not observed in the molecular dynamics simulations. Our results underline the importance of vibronic effects for the UV-vis spectrum of TCNQ - , and they establish an efficient method for obtaining vibronic spectra using a combination of linear-response time-dependent density functional theory and a real-time generating function approach.

Orientation hydrogen-bonding effect on vibronic spectra of isoquinoline in water solvent: Franck-Condon simulation and interpretation

NASA Astrophysics Data System (ADS)

Liu, Yu-Hui; Wang, Shi-Ming; Wang, Chen-Wen; Zhu, Chaoyuan; Han, Ke-Li; Lin, Sheng-Hsien

2016-10-01

The excited-state orientation hydrogen-bonding dynamics, and vibronic spectra of isoquinoline (IQ) and its cationic form IQc in water have been investigated at the time-dependent density functional theory quantum chemistry level plus Franck-Condon simulation and interpretation. The excited-state orientation hydrogen bond strengthening has been found in IQ:H2O complex due to the charge redistribution upon excitation; this is interpreted by simulated 1:1 mixed absorption spectra of free IQ and IQ:H2O complex having best agreement with experimental results. Conversely, the orientation hydrogen bond in IQc:H2O complex would be strongly weakening in the S1 state and this is interpreted by simulated absorption spectra of free IQc having best agreement with experimental results. By performing Franck-Condon simulation, it reveals that several important vibrational normal modes with frequencies about 1250 cm-1 involving the wagging motion of the hydrogen atoms are very sensitive to the formation of the orientation hydrogen bond for the IQ/IQc:H2O complex and this is confirmed by damped Franck-Condon simulation with free IQ/IQc in water. However, the emission spectra of the IQ and IQc in water have been found differently. Upon the excitation, the simulated fluorescence of IQ in water is dominated by the IQ:H2O complex; thus hydrogen bond between IQ and H2O is much easier to form in the S1 state. While the weakened hydrogen bond in IQc:H2O complex is probably cleaved upon the laser pulse because the simulated emission spectrum of the free IQc is in better agreement with the experimental results.

Vibrationally high-resolved electronic spectra of MCl2 (M=C, Si, Ge, Sn, Pb) and photoelectron spectra of MCl2(.).

PubMed

Ran, Yibin; Pang, Min; Shen, Wei; Li, Ming; He, Rongxing

2016-10-05

We systematically studied the vibrational-resolved electronic spectra of group IV dichlorides using the Franck-Condon approximation combined with the Duschinsky and Herzberg-Teller effects in harmonic and anharmonic frameworks (only the simulation of absorption spectra includes the anharmonicity). Calculated results showed that the band shapes of simulated spectra are in accordance with those of the corresponding experimental or theoretical ones. We found that the symmetric bend mode in progression of absorption is the most active one, whereas the main contributor in photoelectron spectra is the symmetric stretching mode. Moreover, the Duschinsky and anharmonic effects exert weak influence on the absorption spectra, except for PbCl2 molecule. The theoretical insights presented in this work are significant in understanding the photophysical properties of MCl2 (M=C, Si, Ge, Sn, Pb) and studying the Herzberg-Teller and the anharmonic effects on the absorption spectra of new dichlorides of this main group. Copyright © 2016 Elsevier B.V. All rights reserved.

Statistical Signal Processing for Remote Sensing of Targets: Proposal for Terrestrial Science Program

DTIC Science & Technology

2014-11-14

responses from any analyte under consideration. Figure 1 illustrates this behavior. Figure 1: LIBS spectra from OVA (ricin simulant) on...illustrates this behavior. Figure 1: LIBS spectra from OVA (ricin simulant) on several different substrates: steel, aluminum, and polycarbonate

Simulation of Near-Edge X-ray Absorption Fine Structure with Time-Dependent Equation-of-Motion Coupled-Cluster Theory.

PubMed

Nascimento, Daniel R; DePrince, A Eugene

2017-07-06

An explicitly time-dependent (TD) approach to equation-of-motion (EOM) coupled-cluster theory with single and double excitations (CCSD) is implemented for simulating near-edge X-ray absorption fine structure in molecular systems. The TD-EOM-CCSD absorption line shape function is given by the Fourier transform of the CCSD dipole autocorrelation function. We represent this transform by its Padé approximant, which provides converged spectra in much shorter simulation times than are required by the Fourier form. The result is a powerful framework for the blackbox simulation of broadband absorption spectra. K-edge X-ray absorption spectra for carbon, nitrogen, and oxygen in several small molecules are obtained from the real part of the absorption line shape function and are compared with experiment. The computed and experimentally obtained spectra are in good agreement; the mean unsigned error in the predicted peak positions is only 1.2 eV. We also explore the spectral signatures of protonation in these molecules.

Effect of photon energy spectrum on dosimetric parameters of brachytherapy sources.

PubMed

Ghorbani, Mahdi; Mehrpouyan, Mohammad; Davenport, David; Ahmadi Moghaddas, Toktam

2016-06-01

The aim of this study is to quantify the influence of the photon energy spectrum of brachytherapy sources on task group No. 43 (TG-43) dosimetric parameters. Different photon spectra are used for a specific radionuclide in Monte Carlo simulations of brachytherapy sources. MCNPX code was used to simulate 125I, 103Pd, 169Yb, and 192Ir brachytherapy sources. Air kerma strength per activity, dose rate constant, radial dose function, and two dimensional (2D) anisotropy functions were calculated and isodose curves were plotted for three different photon energy spectra. The references for photon energy spectra were: published papers, Lawrence Berkeley National Laboratory (LBNL), and National Nuclear Data Center (NNDC). The data calculated by these photon energy spectra were compared. Dose rate constant values showed a maximum difference of 24.07% for 103Pd source with different photon energy spectra. Radial dose function values based on different spectra were relatively the same. 2D anisotropy function values showed minor differences in most of distances and angles. There was not any detectable difference between the isodose contours. Dosimetric parameters obtained with different photon spectra were relatively the same, however it is suggested that more accurate and updated photon energy spectra be used in Monte Carlo simulations. This would allow for calculation of reliable dosimetric data for source modeling and calculation in brachytherapy treatment planning systems.

Effect of photon energy spectrum on dosimetric parameters of brachytherapy sources

PubMed Central

Ghorbani, Mahdi; Davenport, David

2016-01-01

Abstract Aim The aim of this study is to quantify the influence of the photon energy spectrum of brachytherapy sources on task group No. 43 (TG-43) dosimetric parameters. Background Different photon spectra are used for a specific radionuclide in Monte Carlo simulations of brachytherapy sources. Materials and methods MCNPX code was used to simulate 125I, 103Pd, 169Yb, and 192Ir brachytherapy sources. Air kerma strength per activity, dose rate constant, radial dose function, and two dimensional (2D) anisotropy functions were calculated and isodose curves were plotted for three different photon energy spectra. The references for photon energy spectra were: published papers, Lawrence Berkeley National Laboratory (LBNL), and National Nuclear Data Center (NNDC). The data calculated by these photon energy spectra were compared. Results Dose rate constant values showed a maximum difference of 24.07% for 103Pd source with different photon energy spectra. Radial dose function values based on different spectra were relatively the same. 2D anisotropy function values showed minor differences in most of distances and angles. There was not any detectable difference between the isodose contours. Conclusions Dosimetric parameters obtained with different photon spectra were relatively the same, however it is suggested that more accurate and updated photon energy spectra be used in Monte Carlo simulations. This would allow for calculation of reliable dosimetric data for source modeling and calculation in brachytherapy treatment planning systems. PMID:27247558

Neutron spectra from beam-target reactions in dense Z-pinches

NASA Astrophysics Data System (ADS)

Appelbe, B.; Chittenden, J.

2015-10-01

The energy spectrum of neutrons emitted by a range of deuterium and deuterium-tritium Z-pinch devices is investigated computationally using a hybrid kinetic-MHD model. 3D MHD simulations are used to model the implosion, stagnation, and break-up of dense plasma focus devices at currents of 70 kA, 500 kA, and 2 MA and also a 15 MA gas puff. Instabilities in the MHD simulations generate large electric and magnetic fields, which accelerate ions during the stagnation and break-up phases. A kinetic model is used to calculate the trajectories of these ions and the neutron spectra produced due to the interaction of these ions with the background plasma. It is found that these beam-target neutron spectra are sensitive to the electric and magnetic fields at stagnation resulting in significant differences in the spectra emitted by each device. Most notably, magnetization of the accelerated ions causes the beam-target spectra to be isotropic for the gas puff simulations. It is also shown that beam-target spectra can have a peak intensity located at a lower energy than the peak intensity of a thermonuclear spectrum. A number of other differences in the shapes of beam-target and thermonuclear spectra are also observed for each device. Finally, significant differences between the shapes of beam-target DD and DT neutron spectra, due to differences in the reaction cross-sections, are illustrated.

Deep learning approaches for detection and removal of ghosting artifacts in MR spectroscopy.

PubMed

Kyathanahally, Sreenath P; Döring, André; Kreis, Roland

2018-09-01

To make use of deep learning (DL) methods to detect and remove ghosting artifacts in clinical magnetic resonance spectra of human brain. Deep learning algorithms, including fully connected neural networks, deep-convolutional neural networks, and stacked what-where auto encoders, were implemented to detect and correct MR spectra containing spurious echo ghost signals. The DL methods were trained on a huge database of simulated spectra with and without ghosting artifacts that represent complex variations of ghost-ridden spectra, transformed to time-frequency spectrograms. The trained model was tested on simulated and in vivo spectra. The preliminary results for ghost detection are very promising, reaching almost 100% accuracy, and the DL ghost removal methods show potential in simulated and in vivo spectra, but need further refinement and quantitative testing. Ghosting artifacts in spectroscopy are problematic, as they superimpose with metabolites and lead to inaccurate quantification. Detection and removal of ghosting artifacts using traditional machine learning approaches with feature extraction/selection is difficult, as ghosts appear at different frequencies. Here, we show that DL methods perform extremely well for ghost detection if the spectra are treated as images in the form of time-frequency representations. Further optimization for in vivo spectra will hopefully confirm their "ghostbusting" capacity. Magn Reson Med 80:851-863, 2018. © 2018 International Society for Magnetic Resonance in Medicine. © 2018 International Society for Magnetic Resonance in Medicine.

Large Survey of Neutron Spectrum Moments Due to ICF Drive Asymmetry

NASA Astrophysics Data System (ADS)

Field, J. E.; Munro, D.; Spears, B.; Peterson, J. L.; Brandon, S.; Gaffney, J. A.; Hammer, J.; Langer, S.; Nora, R. C.; Springer, P.; ICF Workflow Collaboration Collaboration

2016-10-01

We have recently completed the largest HYDRA simulation survey to date ( 60 , 000 runs) of drive asymmetry on the new Trinity computer at LANL. The 2D simulations covered a large space of credible perturbations to the drive of ICF implosions on the NIF. Cumulants of the produced birth energy spectrum for DD and DT reaction neutrons were tallied using new methods. Comparison of the experimental spectra with our map of predicted spectra from simulation should provide a wealth of information about the burning plasma region. We report on our results, highlighting areas of agreement (and disagreement) with experimental spectra. We also identify features in the predicted spectra that might be amenable to measurement with improved diagnostics. Prepared by LLNL under Contract DE-AC52-07NA27344. IM release #: LLNL-PROC-697321.

MCNP modelling of scintillation-detector gamma-ray spectra from natural radionuclides.

PubMed

Hendriks, P H G M; Maucec, M; de Meijer, R J

2002-09-01

gamma-ray spectra of natural radionuclides are simulated for a BGO detector in a borehole geometry using the Monte Carlo code MCNP. All gamma-ray emissions of the decay of 40K and the series of 232Th and 238U are used to describe the source. A procedure is proposed which excludes the time-consuming electron tracking in less relevant areas of the geometry. The simulated gamma-ray spectra are benchmarked against laboratory data.

Dried Out: Phytoplankton Drought Response in the San Francisco Estuary

NASA Astrophysics Data System (ADS)

Dawson, T.; Houskeeper, H. F.; Palacios, S. L.; Peacock, M.; Kudela, R. M.

2017-12-01

Between 2012 and 2016, the state of California experienced one of the most severe multiyear droughts in nearly 120 years, causing a drastic reduction of freshwater flow to the San Francisco Estuary (SFE). During this period, retention by dams, coupled with the lack of winter rains and spring snow melt led to roughly a third less water reaching the SFE. Decreased freshwater flow to the bay alters the ecology of the SFE, for example by advancing the seasonal timing of phytoplankton blooms, and has been linked to phytoplankton plumes of different, and often more toxic, species. Phytoplankton functional type (PFT) methods, such as PHYDOtax, enable the measurement of community composition, and has been validated in SFE. As part of the NASA Student Airborne Research Program (SARP), we test the accuracy of the PHYDOtax algorithm during the drought period in SFE using matchups between in situ pigment measurements and remotely sensed reflectance spectra from the AVIRIS airborne sensor. We will present time series of salinity and phytoplankton composition in the SFE and evaluate the effects of the drought on the estuarine phytoplankton composition. In the future, California is expected to experience increased frequency of extreme weather events, such as drought, as a consequence of climate change. We evaluate the consequences of the drought on phytoplankton community composition to understand how future extreme weather events may alter the ecology or toxicity of SFE.

Spreadsheet-Based Program for Simulating Atomic Emission Spectra

ERIC Educational Resources Information Center

Flannigan, David J.

2014-01-01

A simple Excel spreadsheet-based program for simulating atomic emission spectra from the properties of neutral atoms (e.g., energies and statistical weights of the electronic states, electronic partition functions, transition probabilities, etc.) is described. The contents of the spreadsheet (i.e., input parameters, formulas for calculating…

Numerical simulation of terahertz generation and detection based on ultrafast photoconductive antennas

NASA Astrophysics Data System (ADS)

Chen, Long-chao; Fan, Wen-hui

2011-08-01

The numerical simulation of terahertz generation and detection in the interaction between femtosecond laser pulse and photoconductive material has been reported in this paper. The simulation model based on the Drude-Lorentz theory is used, and takes into account the phenomena that photo-generated electrons and holes are separated by the external bias field, which is screened by the space-charge field simultaneously. According to the numerical calculation, the terahertz time-domain waveforms and their Fourier-transformed spectra are presented under different conditions. The simulation results indicate that terahertz generation and detection properties of photoconductive antennas are largely influenced by three major factors, including photo-carriers' lifetime, laser pulse width and pump laser power. Finally, a simple model has been applied to simulate the detected terahertz pulses by photoconductive antennas with various photo-carriers' lifetimes, and the results show that the detected terahertz spectra are very different from the spectra radiated from the emitter.

DLTPulseGenerator: A library for the simulation of lifetime spectra based on detector-output pulses

NASA Astrophysics Data System (ADS)

Petschke, Danny; Staab, Torsten E. M.

2018-01-01

The quantitative analysis of lifetime spectra relevant in both life and materials sciences presents one of the ill-posed inverse problems and, hence, leads to most stringent requirements on the hardware specifications and the analysis algorithms. Here we present DLTPulseGenerator, a library written in native C++ 11, which provides a simulation of lifetime spectra according to the measurement setup. The simulation is based on pairs of non-TTL detector output-pulses. Those pulses require the Constant Fraction Principle (CFD) for the determination of the exact timing signal and, thus, the calculation of the time difference i.e. the lifetime. To verify the functionality, simulation results were compared to experimentally obtained data using Positron Annihilation Lifetime Spectroscopy (PALS) on pure tin.

Analysis of MASTER Thermal Data in the Greeley Area of the Front Range Urban Corridor, Colorado--Delineation of Sites for Infrastructure Resource Characterization

USGS Publications Warehouse

Livo, K. Eric; Watson, Ken

2002-01-01

Sand and soils southwest of Greeley, Colorado, were characterized for mineral composition and industrial quality. Radi-ance data from the thermal channels of the MASTER simulator were calibrated using estimated atmospheric parameters. Chan-nel emissivities were approximated using an estimated ground temperature. Subsequently, a decorrelation algorithm was used to calculate inverse wave emissivity images. Six soil classes, one vegetation class, water, and several small classes were defined using an unsupervised classification algorithm. Ground covered by each of the derived emissivity spectral classes was studied using color-infrared air photos, color-infrared composite MAS-TER data, geologic maps, NASA/JPL Airborne Visible and Infra-red Imaging Spectrometer (AVIRIS) data, and field examination. Spectral classes were characterized by their responses and related to their mineral content through field examination. Classes with a minimum at channel 44, and having a similar spectral shape to quartz, field checked as containing abundant quartz. Classes with a minimum at channel 45, and having a spectral shape similar to the sheet minerals, were found in the field to contain abundant mica and clay. Sandy soil was found to have a positive slope at the longer wavelengths; the more clay rich soils had a negative slope. Spectra with a strong downturn at channel 50 generally indicated low vegetation cover, whereas an upturn indicated more vegetation cover. Mapping revealed a range of classified soils with varying amounts of quartz, silt, clay, and plant humus. Sand and gravel operations along the St. Vrain River, gravel lots, and some fields spectrally classified as quartz-rich sands were confirmed through field examination. Other fields mapped as sandy soils, ranging from quartz-rich sandy soil to quartz-rich silt-sand soil with clay. Flood plains mapped as sandy-silty-organic-rich clay. The city of Greeley contained all classes of materials, with the sand classes mapping as various types of asphalt. Abundant quartz gravel was apparent within the asphalt during field check-ing. The clay classes mapped silt-clay soils in areas of irrigated grass landscaping, some fields, and roofing materials.

Analysis of hyperspectral data for estimation of temperate forest canopy nitrogen concentration: comparison between an airborne (AVIRIS) and a spaceborne (Hyperion) sensor

Treesearch

Marie-Louise Smith; Mary E. Martin; Lucie Plourde; Scott V. Ollinger

2003-01-01

Field studies among diverse biomes demonstrate that mass-based nitrogen concentration at leaf and canopy scales is strongly related to carbon uptake and cycling. Combined field and airborne imaging spectrometry studies demonstrate the capacity for accurate empirical estimation of forest canopy N concentration and other biochemical constituents at scales from forest...

Volcanic CO2 abundance of Kilauea plume retrieved by means of AVIRIS data

NASA Technical Reports Server (NTRS)

Pieri, David; Spinetti, C.; Carrere, V.; Buongiorno, M. F.

2004-01-01

Absorbing the electromagnetic radiation in several regions of the solar spectrum, C02 plays an important role in the Earth radiation budget since it produces the greenhouse effect. Many natural processes in the Earth's system add and remove carbon dioxide. Overall, measurements of atmospheric carbon dioxide at different sites around the world show an increased carbon dioxide concentration in the atmosphere.

A Multitemporal, Multisensor Approach to Mapping the Canadian Boreal Forest

NASA Astrophysics Data System (ADS)

Reith, Ernest

The main anthropogenic source of CO2 emissions is the combustion of fossil fuels, while the clearing and burning of forests contribute significant amounts as well. Vegetation represents a major reservoir for terrestrial carbon stocks, and improving our ability to inventory vegetation will enhance our understanding of the impacts of land cover and climate change on carbon stocks and fluxes. These relationships may be an indication of a series of troubling biosphere-atmospheric feedback mechanisms that need to be better understood and modeled. Valuable land cover information can be provided to the global climate change modeling community using advanced remote sensing capabilities such as Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and Airborne Synthetic Aperture Radar (AIRSAR). Individually and synergistically, data were successfully used to characterize the complex nature of the Canadian boreal forest land cover types. The multiple endmember spectral mixture analysis process was applied against seasonal AVIRIS data to produce species-level vegetated land cover maps of two study sites in the Canadian boreal forest: Old Black Spruce (OBS) and Old Jack Pine (OJP). The highest overall accuracy was assessed to be at least 66% accurate to the available reference map, providing evidence that high-quality, species-level land cover mapping of the Canadian boreal forest is achievable at accuracy levels greater than other previous research efforts in the region. Backscatter information from multichannel, polarimetric SAR utilizing a binary decision tree-based classification technique methodology was moderately successfully applied to AIRSAR to produce maps of the boreal land cover types at both sites, with overall accuracies at least 59%. A process, centered around noise whitening and principal component analysis features of the minimum noise fraction transform, was implemented to leverage synergies contained within spatially coregistered multitemporal and multisensor AVIRIS and AIRSAR data sets to successfully produce high-accuracy boreal forest land cover maps. Overall land cover map accuracies of 78% and 72% were assessed for OJP and OBS sites, respectively, for either seasonal or multitemporal data sets. High individual land cover accuracies appeared to be independent of site, season, or multisensor combination in the minimum-noise fraction-based approach.

Mapping Changes in the Distribution of Aquatic Plant Species in the Sacramento-San Joaquin Delta from Airborne AVIRIS-ng Data

NASA Astrophysics Data System (ADS)

Ustin, S.; Khanna, S.; Bellvert, J.; Ustin, J. D.; Shapiro, K.

2016-12-01

Starting in the late 1980s major invasive aquatic pests began to expand their distributions in the Sacramento-San Joaquin Delta, California, USA, an area of 2,219 Km2 with 1,800 Km waterways. The most aggressive are the floating weed, Eichhornia crassipes (water hyacinth) and the submerged Egeria densa (Brazilian waterweed). The distribution of these species has reportedly expanded during the 2011-2015 drought. We mapped the distributions of invasive aquatic species using data from NASA's Airborne Visible InfraRed Imaging Spectrometer - Next Generation (AVIRIS-NG), which was flown over the Delta November 14, 15, 17, 24, 25, 2014 and September 17-21, 2015 by the Jet Propulsion Laboratory (JPL). AVIRIS-NG measures 432 bands across the visible and reflected solar infrared, in wavelengths between 346 nm to 2505 nm. Sixty-one flightlines were flown at a nominal spatial resolution of 2.5 m x 2.5 m each year. Field data, identifying locations of aquatic species (1,036 points in 2014 and 1,375 in 2015) were collected by boat between October 20-30, 2014 and September 9-17, 2015 and were used for training and validation. The Random Forest (RF) machine learning algorithm was used to classify the species locations each year. The resulting classification was highly consistent with the field data, and produced pixel-based overall accuracy from confusion matrices of 83.9% with kappa values > 0.8 (indicating excellent agreement) in 2014 and overall accuracy of 95.8 and kappa value > 0.9 in 2015. Species distributions were highly dynamic between years. Submerged macrophytes increased their extent and density in 2015 from 779.4 m2 in 2014 to 1170.6 m2. Floating macrophytes acreage decreased from 354.0 m2 in 2014 to 191.4 m2 in 2015. Water hyacinth cover decreased throughout the delta due to chemical control activities but much of the cleared area was replaced by water primrose or submerged species. Water primrose increased from 83.6 m2 in 2014 to 114.3 m2 in 2015.

Assessing Heavy and Trace Metal Contamination in Surface Materials near the Ambaji and Zawar mines in Gujurat and Rajasthan, India using Airborne Visible/Infrared Imaging Spectrometer-Next Generation (AVIRIS-NG) Data

NASA Astrophysics Data System (ADS)

Farrand, W. H.

2017-12-01

An investigation has begun into effects on water quality in waters coming from a pair of mines, and their surrounding drainage basins, in western India. The study areas are the Ambaji and Zawar mines in the Indian states of, respectively, Gujurat and Rajasthan. The Ambaji mine is situated in Precambrian-aged metasediments and metavolcanics of the Delhi Supergroup. Sulfide mineralization at Ambaji is hosted by hydrothermally altered felsic metavolcanics rocks with ferric oxide and oxyhydroxide as well as copper carbonate surface indicator minerals. The Zawar zinc mine is part of the Precambrian Aravalli Supergroup and lies amidst surface exposures of dolomites and quartzites. Hyperspectral visible through short-wave infrared (VSWIR) data from the Airborne Visible/Infrared Imaging Spectrometer Next Generation (AVIRIS-NG) was collected in February 2016 over these sites as part of a joint campaign between NASA and the Indian Space Research Organization (ISRO). The AVIRIS-NG data is being used to detect, map, and characterize surface mineralogy in the area. Data discovery is being carried out using a self-organizing map (SOM) methodology with mineral endmembers being mapped initially with a support vector machine (SVM) classifier and a planned more comprehensive mapping using the USGS Material Identification and Characterization Algorithm (MICA). Results of the mineral mapping will be field checked and rock, soil, and water samples will be collected and examined for heavy and trace metal contamination. Past studies have shown changes in the shape of the 2.2 mm Al-OH vibrational overtone feature as well as in blue-red spectral ratios that were directly correlated with the concentration of heavy and trace metals that had been adsorbed into the structure of the affected minerals. Early analysis of the Zawar area scenes indicates the presence of Al-OH clay minerals which might have been affected by the adsorption of trace metals. Scenes from the Ambaji area have more extensive surface exposures of carbonate minerals. Future work will focus more closely on detailed spectral feature mapping of absorption features that have been affected by heavy and trace metal adsorption.

Flora: A Proposed Hyperspectral Mission

NASA Technical Reports Server (NTRS)

Ungar, Stephen; Asner, Gregory; Green, Robert; Knox, Robert

2006-01-01

In early 2004, one of the authors (Stephen Ungar, NASA GSFC) presented a mission concept called "Spectrasat" at the AVIRIS Workshop in Pasadena, CA. This mission concept grew out of the lessons learned from the Earth Observing-One (EO-1) Hyperion Imaging Spectrometer and was structured to more effectively accomplish the types of studies conducted with Hyperion. The Spectrasat concept represented an evolution of the technologies and operation strategies employed on EO-I. The Spectrasat concept had been preceded by two community-based missions proposed by Susan Ustin, UC Davis and Robert Green, NASA JPL. As a result of community participation, starting at this AVIRIS Workshop, the Spectrasat proposal evolved into the Flora concept which now represents the combined visions of Gregory Asner (Carnegie Institute), Stephen Ungar, Robert Green and Robert Knox, NASA GSFC. Flora is a proposed imaging spectrometer mission, designed to address global carbon cycle science issues. This mission centers on measuring ecological disturbance for purposes of ascertaining changes in global carbon stocks and draws heavily on experience gained through AVIRIS airborne flights and Hyperion space born flights. The observing strategy exploits the improved ability of imaging spectrometers, as compared with multi-spectral observing systems, to identify vegetation functional groups, detect ecosystem response to disturbance and assess the related discovery. Flora will be placed in a sun synchronous orbit, with a 45 meter pixel size, a 90 km swath width and a 31 day repeat cycle. It covers the spectral range from 0.4 to 2.5 micrometers with a spectral sampling interval of 10 nm. These specifications meet the needs of the Flora science team under the leadership of Gregory Asner. Robert Green, has introduced a spectrometer design for Flora which is expected to have a SNR of 600: 1 in the VNIR and 450: 1 in the SWIR. The mission team at NASA GSFC is designing an Intelligent Payload Module (IPM) designed to effectively reduce the volume of data required to be transmitted down to the ground. This paper discusses mission science objectives, describes the mission concept and presents the current status of possible funding opportunities leading to realization of the mission.

High-Performance First-Principles Molecular Dynamics for Predictive Theory and Modeling

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gygi, Francois; Galli, Giulia; Schwegler, Eric

This project focused on developing high-performance software tools for First-Principles Molecular Dynamics (FPMD) simulations, and applying them in investigations of materials relevant to energy conversion processes. FPMD is an atomistic simulation method that combines a quantum-mechanical description of electronic structure with the statistical description provided by molecular dynamics (MD) simulations. This reliance on fundamental principles allows FPMD simulations to provide a consistent description of structural, dynamical and electronic properties of a material. This is particularly useful in systems for which reliable empirical models are lacking. FPMD simulations are increasingly used as a predictive tool for applications such as batteries, solarmore » energy conversion, light-emitting devices, electro-chemical energy conversion devices and other materials. During the course of the project, several new features were developed and added to the open-source Qbox FPMD code. The code was further optimized for scalable operation of large-scale, Leadership-Class DOE computers. When combined with Many-Body Perturbation Theory (MBPT) calculations, this infrastructure was used to investigate structural and electronic properties of liquid water, ice, aqueous solutions, nanoparticles and solid-liquid interfaces. Computing both ionic trajectories and electronic structure in a consistent manner enabled the simulation of several spectroscopic properties, such as Raman spectra, infrared spectra, and sum-frequency generation spectra. The accuracy of the approximations used allowed for direct comparisons of results with experimental data such as optical spectra, X-ray and neutron diffraction spectra. The software infrastructure developed in this project, as applied to various investigations of solids, liquids and interfaces, demonstrates that FPMD simulations can provide a detailed, atomic-scale picture of structural, vibrational and electronic properties of complex systems relevant to energy conversion devices.« less

Sensing, Spectra and Scaling: What's in Store for Land Observations

NASA Technical Reports Server (NTRS)

Goetz, Alexander F. H.

2001-01-01

Bill Pecora's 1960's vision of the future, using spacecraft-based sensors for mapping the environment and exploring for resources, is being implemented today. New technology has produced better sensors in space such as the Landsat Thematic Mapper (TM) and SPOT, and creative researchers are continuing to find new applications. However, with existing sensors, and those intended for launch in this century, the potential for extracting information from the land surface is far from being exploited. The most recent technology development is imaging spectrometry, the acquisition of images in hundreds of contiguous spectral bands, such that for any pixel a complete reflectance spectrum can be acquired. Experience with Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) has shown that, with proper attention paid to absolute calibration, it is possible to acquire apparent surface reflectance to 5% accuracy without any ground-based measurement. The data reduction incorporates in educated guess of the aerosol scattering, development of a precipitable water vapor map from the data and mapping of cirrus clouds in the 1.38 micrometer band. This is not possible with TM. The pixel size in images of the earth plays and important role in the type and quality of information that can be derived. Less understood is the coupling between spatial and spectral resolution in a sensor. Recent work has shown that in processing the data to derive the relative abundance of materials in a pixel, also known is unmixing, the pixel size is an important parameter. A variance in the relative abundance of materials among the pixels is necessary to be able to derive the endmembers or pure material constituent spectra. In most cases, the 1 km pixel size for the Earth Observing System Moderate Resolution Imaging Spectroradiometer (MODIS) instrument is too large to meet the variance criterion. A pointable high spatial and spectral resolution imaging spectrometer in orbit will be necessary to make the major next step in our understanding of the solid earth surface and its changing face.

Mineralogical Composition and Potential Dust Source of Playas in the Western U.S. and Australia as Remotely Identified Through Imaging Spectroscopy.

NASA Astrophysics Data System (ADS)

Raming, L. W.; Farrand, W. H.; Bowen, B.

2015-12-01

Playas are significant dust sources and as a result are potentially hazardous to human health. The composition of the dust is a function of the mineralogical content of the playa and associated brines. Playas are found in arid climates globally, however they are challenging to map geologically as they are often hard to access, have subtle variations in mineralogy, and are topographically featureless. This study uses remote sensing in the form of imaging spectroscopy to map the mineralogical composition of five playas from different geologic settings: Railroad Valley Playa, Nevada, USA; Bonneville Salt Flats, Utah, USA; White Sands National Monument, New Mexico, USA; Lake Brown, Western Australia, Australia; and Lake Tyrrell, Victoria, Australia.Multiple spectrometers were used for this study; these include the multispectral sensor ASTER, and the hyperspectral sensors AVIRIS, HICO, and HyMap. All scenes were processed in ENVI and corrected to at surface reflectance using FLAASH, QUAC or Empirical Line methods. Minerals were identified through a standard end-member extraction approach and mapped using multi-range spectral feature fitting and other methods. Additionally, remote data are combined with in-situ field-based spectra and sample-based laboratory spectra.Initial results suggest various and differing mineralogy between playas. The most abundant mineralogy includes clay minerals such as illite and montmorillonite and evaporites such as gypsum. Additionally there has been identification of Fe absorption bands in the visible / near infrared at White Sands National Monument, and Lake Brown and Lake Tyrell, suggesting the presence of iron bearing minerals. Further research will provide a more comprehensive list of minerals identified by absorption features as related to specific sensors. Collectively, these analyses will be used characterize overall patterns in playa surface mineralogy and to evaluate the parameters that influence playa dust source composition.

Prediction of EPR Spectra of Lyotropic Liquid Crystals using a Combination of Molecular Dynamics Simulations and the Model-Free Approach.

PubMed

Prior, Christopher; Oganesyan, Vasily S

2017-09-21

We report the first application of fully atomistic molecular dynamics (MD) simulations to the prediction of the motional electron paramagnetic resonance (EPR) spectra of lyotropic liquid crystals in different aggregation states doped with a paramagnetic spin probe. The purpose of this study is twofold. First, given that EPR spectra are highly sensitive to the motions and order of the spin probes doped within lyotropic aggregates, simulation of EPR line shapes from the results of MD modelling provides an ultimate test bed for the force fields currently employed to model such systems. Second, the EPR line shapes are simulated using the motional parameters extracted from MD trajectories using the Model-Free (MF) approach. Thus a combined MD-EPR methodology allowed us to test directly the validity of the application of the MF approach to systems with multi-component molecular motions. All-atom MD simulations using the General AMBER Force Field (GAFF) have been performed on sodium dodecyl sulfate (SDS) and dodecyltrimethylammonium chloride (DTAC) liquid crystals. The resulting MD trajectories were used to predict and interpret the EPR spectra of pre-micellar, micellar, rod and lamellar aggregates. The predicted EPR spectra demonstrate good agreement with most of experimental line shapes thus confirming the validity of both the force fields employed and the MF approach for the studied systems. At the same time simulation results confirm that GAFF tends to overestimate the packing and the order of the carbonyl chains of the surfactant molecules. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Simplified expressions that incorporate finite pulse effects into coherent two-dimensional optical spectra.

PubMed

Do, Thanh Nhut; Gelin, Maxim F; Tan, Howe-Siang

2017-10-14

We derive general expressions that incorporate finite pulse envelope effects into a coherent two-dimensional optical spectroscopy (2DOS) technique. These expressions are simpler and less computationally intensive than the conventional triple integral calculations needed to simulate 2DOS spectra. The simplified expressions involving multiplications of arbitrary pulse spectra with 2D spectral response function are shown to be exactly equal to the conventional triple integral calculations of 2DOS spectra if the 2D spectral response functions do not vary with population time. With minor modifications, they are also accurate for 2D spectral response functions with quantum beats and exponential decay during population time. These conditions cover a broad range of experimental 2DOS spectra. For certain analytically defined pulse spectra, we also derived expressions of 2D spectra for arbitrary population time dependent 2DOS spectral response functions. Having simpler and more efficient methods to calculate experimentally relevant 2DOS spectra with finite pulse effect considered will be important in the simulation and understanding of the complex systems routinely being studied by using 2DOS.

A Validation Study of the Compressible Rayleigh–Taylor Instability Comparing the Ares and Miranda Codes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rehagen, Thomas J.; Greenough, Jeffrey A.; Olson, Britton J.

In this paper, the compressible Rayleigh–Taylor (RT) instability is studied by performing a suite of large eddy simulations (LES) using the Miranda and Ares codes. A grid convergence study is carried out for each of these computational methods, and the convergence properties of integral mixing diagnostics and late-time spectra are established. A comparison between the methods is made using the data from the highest resolution simulations in order to validate the Ares hydro scheme. We find that the integral mixing measures, which capture the global properties of the RT instability, show good agreement between the two codes at this resolution.more » The late-time turbulent kinetic energy and mass fraction spectra roughly follow a Kolmogorov spectrum, and drop off as k approaches the Nyquist wave number of each simulation. The spectra from the highest resolution Miranda simulation follow a Kolmogorov spectrum for longer than the corresponding spectra from the Ares simulation, and have a more abrupt drop off at high wave numbers. The growth rate is determined to be between around 0.03 and 0.05 at late times; however, it has not fully converged by the end of the simulation. Finally, we study the transition from direct numerical simulation (DNS) to LES. The highest resolution simulations become LES at around t/τ ≃ 1.5. Finally, to have a fully resolved DNS through the end of our simulations, the grid spacing must be 3.6 (3.1) times finer than our highest resolution mesh when using Miranda (Ares).« less

A Validation Study of the Compressible Rayleigh–Taylor Instability Comparing the Ares and Miranda Codes

DOE PAGES

Rehagen, Thomas J.; Greenough, Jeffrey A.; Olson, Britton J.

2017-04-20

In this paper, the compressible Rayleigh–Taylor (RT) instability is studied by performing a suite of large eddy simulations (LES) using the Miranda and Ares codes. A grid convergence study is carried out for each of these computational methods, and the convergence properties of integral mixing diagnostics and late-time spectra are established. A comparison between the methods is made using the data from the highest resolution simulations in order to validate the Ares hydro scheme. We find that the integral mixing measures, which capture the global properties of the RT instability, show good agreement between the two codes at this resolution.more » The late-time turbulent kinetic energy and mass fraction spectra roughly follow a Kolmogorov spectrum, and drop off as k approaches the Nyquist wave number of each simulation. The spectra from the highest resolution Miranda simulation follow a Kolmogorov spectrum for longer than the corresponding spectra from the Ares simulation, and have a more abrupt drop off at high wave numbers. The growth rate is determined to be between around 0.03 and 0.05 at late times; however, it has not fully converged by the end of the simulation. Finally, we study the transition from direct numerical simulation (DNS) to LES. The highest resolution simulations become LES at around t/τ ≃ 1.5. Finally, to have a fully resolved DNS through the end of our simulations, the grid spacing must be 3.6 (3.1) times finer than our highest resolution mesh when using Miranda (Ares).« less

Franck-Condon Simulations including Anharmonicity of the Ã(1)A''-X̃(1)A' Absorption and Single Vibronic Level Emission Spectra of HSiCl and DSiCl.

PubMed

Mok, Daniel W K; Lee, Edmond P F; Chau, Foo-Tim; Dyke, John M

2009-03-10

RCCSD(T) and/or CASSCF/MRCI calculations have been carried out on the X̃(1)A' and Ã(1)A'' states of HSiCl employing basis sets of up to the aug-cc-pV5Z quality. Contributions from core correlation and extrapolation to the complete basis set limit were included in determining the computed equilibrium geometrical parameters and relative electronic energy of these two states of HSiCl. Franck-Condon factors which include allowance for anharmonicity and Duschinsky rotation between these two states of HSiCl and DSiCl were calculated employing RCCSD(T) and CASSCF/MRCI potential energy functions, and were used to simulate the Ã(1)A'' ← X̃(1)A' absorption and Ã(1)A'' → X̃(1)A' single vibronic level (SVL) emission spectra of HSiCl and DSiCl. Simulated absorption and experimental LIF spectra, and simulated and observed Ã(1)A''(0,0,0) → X̃(1)A' SVL emission spectra, of HSiCl and DSiCl are in very good agreement. However, agreement between simulated and observed Ã(1)A''(0,1,0) → X̃(1)A' and Ã(1)A''(0,2,1) → X̃(1)A' SVL emission spectra of DSiCl is not as good. Preliminary calculations on low-lying excited states of HSiCl suggest that vibronic interaction between low-lying vibrational levels of the Ã(1)A'' state and highly excited vibrational levels of the ã(3)A'' is possible. Such vibronic interaction may change the character of the low-lying vibrational levels of the Ã(1)A'' state, which would lead to perturbation in the SVL emission spectra from these vibrational levels.

Spectrum-to-Spectrum Searching Using a Proteome-wide Spectral Library*

PubMed Central

Yen, Chia-Yu; Houel, Stephane; Ahn, Natalie G.; Old, William M.

2011-01-01

The unambiguous assignment of tandem mass spectra (MS/MS) to peptide sequences remains a key unsolved problem in proteomics. Spectral library search strategies have emerged as a promising alternative for peptide identification, in which MS/MS spectra are directly compared against a reference library of confidently assigned spectra. Two problems relate to library size. First, reference spectral libraries are limited to rediscovery of previously identified peptides and are not applicable to new peptides, because of their incomplete coverage of the human proteome. Second, problems arise when searching a spectral library the size of the entire human proteome. We observed that traditional dot product scoring methods do not scale well with spectral library size, showing reduction in sensitivity when library size is increased. We show that this problem can be addressed by optimizing scoring metrics for spectrum-to-spectrum searches with large spectral libraries. MS/MS spectra for the 1.3 million predicted tryptic peptides in the human proteome are simulated using a kinetic fragmentation model (MassAnalyzer version2.1) to create a proteome-wide simulated spectral library. Searches of the simulated library increase MS/MS assignments by 24% compared with Mascot, when using probabilistic and rank based scoring methods. The proteome-wide coverage of the simulated library leads to 11% increase in unique peptide assignments, compared with parallel searches of a reference spectral library. Further improvement is attained when reference spectra and simulated spectra are combined into a hybrid spectral library, yielding 52% increased MS/MS assignments compared with Mascot searches. Our study demonstrates the advantages of using probabilistic and rank based scores to improve performance of spectrum-to-spectrum search strategies. PMID:21532008

Machine learning molecular dynamics for the simulation of infrared spectra.

PubMed

Gastegger, Michael; Behler, Jörg; Marquetand, Philipp

2017-10-01

Machine learning has emerged as an invaluable tool in many research areas. In the present work, we harness this power to predict highly accurate molecular infrared spectra with unprecedented computational efficiency. To account for vibrational anharmonic and dynamical effects - typically neglected by conventional quantum chemistry approaches - we base our machine learning strategy on ab initio molecular dynamics simulations. While these simulations are usually extremely time consuming even for small molecules, we overcome these limitations by leveraging the power of a variety of machine learning techniques, not only accelerating simulations by several orders of magnitude, but also greatly extending the size of systems that can be treated. To this end, we develop a molecular dipole moment model based on environment dependent neural network charges and combine it with the neural network potential approach of Behler and Parrinello. Contrary to the prevalent big data philosophy, we are able to obtain very accurate machine learning models for the prediction of infrared spectra based on only a few hundreds of electronic structure reference points. This is made possible through the use of molecular forces during neural network potential training and the introduction of a fully automated sampling scheme. We demonstrate the power of our machine learning approach by applying it to model the infrared spectra of a methanol molecule, n -alkanes containing up to 200 atoms and the protonated alanine tripeptide, which at the same time represents the first application of machine learning techniques to simulate the dynamics of a peptide. In all of these case studies we find an excellent agreement between the infrared spectra predicted via machine learning models and the respective theoretical and experimental spectra.

[Study on the effect of solar spectra on the retrieval of atmospheric CO2 concentration using high resolution absorption spectra].

PubMed

Hu, Zhen-Hua; Huang, Teng; Wang, Ying-Ping; Ding, Lei; Zheng, Hai-Yang; Fang, Li

2011-06-01

Taking solar source as radiation in the near-infrared high-resolution absorption spectrum is widely used in remote sensing of atmospheric parameters. The present paper will take retrieval of the concentration of CO2 for example, and study the effect of solar spectra resolution. Retrieving concentrations of CO2 by using high resolution absorption spectra, a method which uses the program provided by AER to calculate the solar spectra at the top of atmosphere as radiation and combine with the HRATS (high resolution atmospheric transmission simulation) to simulate retrieving concentration of CO2. Numerical simulation shows that the accuracy of solar spectrum is important to retrieval, especially in the hyper-resolution spectral retrieavl, and the error of retrieval concentration has poor linear relation with the resolution of observation, but there is a tendency that the decrease in the resolution requires low resolution of solar spectrum. In order to retrieve the concentration of CO2 of atmosphere, the authors' should take full advantage of high-resolution solar spectrum at the top of atmosphere.

Coupling CP-MD simulations and X-ray absorption spectroscopy: exploring the structure of oxaliplatin in aqueous solution.

PubMed

Beret, Elizabeth C; Provost, Karine; Müller, Diane; Marcos, Enrique Sánchez

2009-09-10

A combined experimental-theoretical approach applying X-ray absorption spectroscopy and ab initio molecular dynamics (CP-MD) simulations is used to get insight into the structural determination of oxaliplatin, a third-generation anticancer drug of the cisplatin family, in aqueous solution. Experimental Pt L(III)-edge EXAFS and XANES spectra of oxaliplatin in water are compared with theoretical XAS spectra. The latter are obtained as statistically averaged spectra computed for a set of selected snapshots extracted from the MD trajectory of ethyldiamineoxalatoplatinum(II) (EDO-Pt) in liquid water. This compound is a simplified structure of oxaliplatin, where the outer part of the cyclohexane ring contained in the cyclohexanediamine ligand of oxaliplatin has been removed. We show that EDO-Pt is an appropriate model to simulate the spectroscopical properties of oxaliplatin given that the cyclohexane ring does not generate particular features in neither the EXAFS nor the XANES spectra. The computation of average EXAFS spectra using structures from the MD simulation in which atoms are selected according to different cutoff radii around the Pt center allows the assignment of spectral features to particular structural motifs, both in k and R-spaces. The outer oxygen atoms of the oxalate ligand (R(Pt-O(II)) = 3.97 +/- 0.03 A) are responsible for a well-defined hump at around 6.5 A(-1) in the k(2)-weighted EXAFS spectrum. The conventional EXAFS analysis data procedure is reexamined by its application to the simulated average EXAFS spectra. The structural parameters resulting from the fit may then be compared with those obtained from the simulation, providing an estimation of the methodological error associated with the global fitting procedure. A thorough discussion on the synergy between the experimental and theoretical XAS approaches is presented, and evidence for the detection of a slight hydration structure around the Pt complex is shown, leading to the suggestion of a new challenge to experimental XAS measurements.

A New NIST Database for the Simulation of Electron Spectra for Surface Analysis (SESSA): Application to Angle-Resolved X-ray Photoelectron Spectroscopy of HfO2, ZrO2, HfSiO4, and ZrSiO4 Films on Silicon

NASA Astrophysics Data System (ADS)

Powell, C. J.; Smekal, W.; Werner, W. S. M.

2005-09-01

We describe a new NIST database for the Simulation of Electron Spectra for Surface Analysis (SESSA). This database provides data for the many parameters needed in quantitative Auger electron spectroscopy (AES) and X-ray photoelectron spectroscopy (XPS). In addition, AES and XPS spectra can be simulated for layered samples. The simulated spectra, for layer compositions and thicknesses specified by the user, can be compared with measured spectra. The layer compositions and thicknesses can then be adjusted to find maximum consistency between simulated and measured spectra. In this way, AES and XPS can provide more detailed characterization of multilayer thin-film materials. We report on the use of SESSA for determining the thicknesses of HfO2, ZrO2, HfSiO4, and ZrSiO4 films on Si by angle-resolved XPS. Practical effective attenuation lengths (EALs) have been computed from SESSA as a function of film thickness and photoelectron emission angle (i.e., to simulate the effects of tilting the sample). These EALs have been compared with similar values obtained from the NIST Electron Effective-Attenuation-Length Database (SRD 82). Generally good agreement was found between corresponding EAL values, but there were differences for film thicknesses less than the inelastic mean free path of the photoelectrons in the overlayer film. These differences are due to a simplifying approximation in the algorithm used to compute EALs in SRD 82. SESSA, with realistic cross sections for elastic and inelastic scattering in the film and substrate materials, is believed to provide more accurate EALs than SRD 82 for thin-film thickness measurements, particularly in applications where the film and substrate have different electron-scattering properties.

A New NIST Database for the Simulation of Electron Spectra for Surface Analysis (SESSA): Application to Angle-Resolved X-ray Photoelectron Spectroscopy of HfO2, ZrO2, HfSiO4, and ZrSiO4 Films on Silicon

DOE Office of Scientific and Technical Information (OSTI.GOV)

Powell, C.J.; Smekal, W.; Werner, W.S.M.

2005-09-09

We describe a new NIST database for the Simulation of Electron Spectra for Surface Analysis (SESSA). This database provides data for the many parameters needed in quantitative Auger electron spectroscopy (AES) and X-ray photoelectron spectroscopy (XPS). In addition, AES and XPS spectra can be simulated for layered samples. The simulated spectra, for layer compositions and thicknesses specified by the user, can be compared with measured spectra. The layer compositions and thicknesses can then be adjusted to find maximum consistency between simulated and measured spectra. In this way, AES and XPS can provide more detailed characterization of multilayer thin-film materials. Wemore » report on the use of SESSA for determining the thicknesses of HfO2, ZrO2, HfSiO4, and ZrSiO4 films on Si by angle-resolved XPS. Practical effective attenuation lengths (EALs) have been computed from SESSA as a function of film thickness and photoelectron emission angle (i.e., to simulate the effects of tilting the sample). These EALs have been compared with similar values obtained from the NIST Electron Effective-Attenuation-Length Database (SRD 82). Generally good agreement was found between corresponding EAL values, but there were differences for film thicknesses less than the inelastic mean free path of the photoelectrons in the overlayer film. These differences are due to a simplifying approximation in the algorithm used to compute EALs in SRD 82. SESSA, with realistic cross sections for elastic and inelastic scattering in the film and substrate materials, is believed to provide more accurate EALs than SRD 82 for thin-film thickness measurements, particularly in applications where the film and substrate have different electron-scattering properties.« less

Towards an improved LAI collection protocol via simulated field-based PAR sensing

DOE PAGES

Yao, Wei; Van Leeuwen, Martin; Romanczyk, Paul; ...

2016-07-14

In support of NASA’s next-generation spectrometer—the Hyperspectral Infrared Imager (HyspIRI)—we are working towards assessing sub-pixel vegetation structure from imaging spectroscopy data. Of particular interest is Leaf Area Index (LAI), which is an informative, yet notoriously challenging parameter to efficiently measure in situ. While photosynthetically-active radiation (PAR) sensors have been validated for measuring crop LAI, there is limited literature on the efficacy of PAR-based LAI measurement in the forest environment. This study (i) validates PAR-based LAI measurement in forest environments, and (ii) proposes a suitable collection protocol, which balances efficiency with measurement variation, e.g., due to sun flecks and various-sized canopymore » gaps. A synthetic PAR sensor model was developed in the Digital Imaging and Remote Sensing Image Generation (DIRSIG) model and used to validate LAI measurement based on first-principles and explicitly-known leaf geometry. Simulated collection parameters were adjusted to empirically identify optimal collection protocols. Furthermore, these collection protocols were then validated in the field by correlating PAR-based LAI measurement to the normalized difference vegetation index (NDVI) extracted from the “classic” Airborne Visible Infrared Imaging Spectrometer (AVIRIS-C) data (R 2 was 0.61). The results indicate that our proposed collecting protocol is suitable for measuring the LAI of sparse forest (LAI < 3–5 ( m 2/m 2)).« less

SiSeRHMap v1.0: a simulator for mapped seismic response using a hybrid model

NASA Astrophysics Data System (ADS)

Grelle, Gerardo; Bonito, Laura; Lampasi, Alessandro; Revellino, Paola; Guerriero, Luigi; Sappa, Giuseppe; Guadagno, Francesco Maria

2016-04-01

The SiSeRHMap (simulator for mapped seismic response using a hybrid model) is a computerized methodology capable of elaborating prediction maps of seismic response in terms of acceleration spectra. It was realized on the basis of a hybrid model which combines different approaches and models in a new and non-conventional way. These approaches and models are organized in a code architecture composed of five interdependent modules. A GIS (geographic information system) cubic model (GCM), which is a layered computational structure based on the concept of lithodynamic units and zones, aims at reproducing a parameterized layered subsoil model. A meta-modelling process confers a hybrid nature to the methodology. In this process, the one-dimensional (1-D) linear equivalent analysis produces acceleration response spectra for a specified number of site profiles using one or more input motions. The shear wave velocity-thickness profiles, defined as trainers, are randomly selected in each zone. Subsequently, a numerical adaptive simulation model (Emul-spectra) is optimized on the above trainer acceleration response spectra by means of a dedicated evolutionary algorithm (EA) and the Levenberg-Marquardt algorithm (LMA) as the final optimizer. In the final step, the GCM maps executor module produces a serial map set of a stratigraphic seismic response at different periods, grid solving the calibrated Emul-spectra model. In addition, the spectra topographic amplification is also computed by means of a 3-D validated numerical prediction model. This model is built to match the results of the numerical simulations related to isolate reliefs using GIS morphometric data. In this way, different sets of seismic response maps are developed on which maps of design acceleration response spectra are also defined by means of an enveloping technique.

Investigation of experimental pole-figure errors by simulation of individual spectra

NASA Astrophysics Data System (ADS)

Lychagina, T. A.; Nikolaev, D. I.

2007-09-01

The errors in measuring the crystallographic texture described by pole figures are studied. A set of diffraction spectra for a sample of the MA2-1 alloy (Mg + 4.5% Al + 1% Zn) are measured, simulation of individual spectra on the basis of which the pole figures were obtained is performed, and their errors are determined. The conclusion about the possibility of determining the effect of errors of the diffraction peak half-width on the pole figure errors that was drawn in our previous studies is confirmed.

NASA Involvement in National Priority Support for Disasters

NASA Technical Reports Server (NTRS)

McGregor, Lloyd

2002-01-01

This viewgraph presentation provides an overview of the role NASA remote sensing played in planning recovery operations in the aftermath of the September 11, 2001 terrorist attacks on the World Trade Center and the Pentagon. The presentation includes AVIRIS and satellite imagery of the attack sites, and photographs taken on the ground after the attacks. One page of the presentation addresses NASA's role in disaster management of the 2002 Winter Olympics.

Simulation of IR and Raman spectra of p-hydroxyanisole and p-nitroanisole based on scaled DFT force fields and their vibrational assignments.

PubMed

Krishnakumar, V; Prabavathi, N

2009-09-15

This work deals with the vibrational spectroscopy of p-hydroxyanisole (PHA) and p-nitroanisole (PNA) by means of quantum chemical calculations. The mid and far FT-IR and FT-Raman spectra were recorded in the condensed state. The fundamental vibrational frequencies and intensity of vibrational bands were evaluated using density functional theory (DFT) with the standard B3LYP/6-31G* method and basis set combination and were scaled using various scale factors which yield a good agreement between observed and calculated frequencies. The vibrational spectra were interpreted with the aid of normal coordinate analysis based on scaled density functional force field. The results of the calculations were applied to simulate infrared and Raman spectra of the title compounds, which showed excellent agreement with the observed spectra.

HyspIRI Measurements of Agricultural Systems in California: 2013-2015

NASA Astrophysics Data System (ADS)

Townsend, P. A.; Kruger, E. L.; Singh, A.; Jablonski, A. D.; Kochaver, S.; Serbin, S.

2015-12-01

During 2013-2015, NASA collected high-altitude AVIRIS hyperspectral and MASTER thermal infrared imagery across large swaths of California in support of the HyspIRI planning and prototyping activities. During these campaigns, we made extensive measurements of photosynthetic capacity—Vcmax and Jmax—and their temperature sensitivities across a range of sites, crop types and environmental conditions. Our objectives were to characterize the physiological diversity of agricultural vegetation in California and develop generalizable algorithms to map these physiological parameters across several image acquisitions, regardless of crop type and canopy temperatures. We employed AVIRIS imagery to scale and estimate the vegetation parameters and MASTER surface temperature to provide context, since physiology responds exponentially to leaf temperature. We demonstrate a segmentation approach to disentangling leaf and background soil temperature, and then illustrate our retrievals of Vcmax and Jmax during overflight conditions across a large number of the 2013-2015 HyspIRI acquisitions. Our results show >80% repeatability (R2) across split sample jack-knifing, with RMSEs within 15% of the range of our data. The approach was robust across crop types (e.g., grape, almond, pistachio, avocado, pomegranate, oats, peppers, citrus, date palm, alfalfa, melons, beets) and leaf temperatures. A global imaging spectroscopy system such as HyspIRI will offer unprecedented ability to monitor agricultural crop performance under widely varying surface conditions.

Discussion of band selection and methodologies for the estimation of precipitable water vapour from AVIRIS data

NASA Technical Reports Server (NTRS)

Schanzer, Dena; Staenz, Karl

1992-01-01

An Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data set acquired over Canal Flats, B.C., on 14 Aug. 1990, was used for the purpose of developing methodologies for surface reflectance retrieval using the 5S atmospheric code. A scene of Rogers Dry Lake, California (23 Jul. 1990), acquired within three weeks of the Canal Flats scene, was used as a potential reference for radiometric calibration purposes and for comparison with other studies using primarily LOWTRAN7. Previous attempts at surface reflectance retrieval indicated that reflectance values in the gaseous absorption bands had the poorest accuracy. Modifications to 5S to use 1 nm step size, in order to make fuller use of the 20 cm(sup -1) resolution of the gaseous absorption data, resulted in some improvement in the accuracy of the retrieved surface reflectance. Estimates of precipitable water vapor using non-linear least squares regression and simple ratioing techniques such as the CIBR (Continuum Interpolated Band Ratio) technique or the narrow/wide technique, which relate ratios of combinations of bands to precipitable water vapor through calibration curves, were found to vary widely. The estimates depended on the bands used for the estimation; none provided entirely satisfactory surface reflectance curves.

Bond Length Dependence on Quantum States as Shown by Spectroscopy

ERIC Educational Resources Information Center

Lim, Kieran F.

2005-01-01

A discussion on how a spreadsheet simulation of linear-molecular spectra could be used to explore the dependence of rotational band spacing and contours on average bond lengths in the initial and final quantum states is presented. The simulation of hydrogen chloride IR, iodine UV-vis, and nitrogen UV-vis spectra clearly show whether the average…

SU-E-T-107: An Investigation Into Attenuation Effects On the Energy Spectrum for {sup 137}Cs Using Monte Carlo Techniques

DOE Office of Scientific and Technical Information (OSTI.GOV)

Taneja, S; Bartol, L; Culberson, W

2015-06-15

Purpose: The calibration of radiation protection instrumentation including ionization chambers, scintillators, and Geiger Mueller (GM) counters used as survey meters are often done using {sup 137}Cs irradiators. During calibration, irradiators use a combination of attenuators with various thicknesses to modulate the beam to a known air-kerma rate. The variations in energy spectra as a result of these attenuators are not accounted for and may play a role in the energy-dependent response of survey meters. This study uses an experimentally validated irradiator geometry modeled in the MCNP5 transport code to characterize the effects of attenuation on the energy spectrum. Methods: Amore » Hopewell Designs G-10 {sup 137}Cs irradiator with lead attenuators of thicknesses of 0.635, 1.22, 2.22, and 4.32 cm, was used in this study. The irradiator geometry was modeled in MCNP5 and validated by comparing measured and simulated percent depth dose (PDD) and cross-field profiles. Variations in MCNP5 simulated spectra with increasing amounts of attenuation were characterized using the relative intensity of the 662 keV peak and the average energy. Results: Simulated and measured PDDs and profiles agreed within the associated uncertainty. The relative intensity of the 662 keV peak for simulated spectra normalized to the intensity of the unattenuated spectra ranged from 0.16% to 100% based on attenuation thickness. The average energy for simulated spectra for attenuators ranged from 582 keV with no attenuation to 653 keV with 5.54 cm of attenuation. Statistical uncertainty for MCNP5 simulations ranged from 0.11% to 3.69%. Conclusion: This study successfully used MCNP5 to validate a {sup 137}Cs irradiator geometry and characterize variations in energy spectra between different amounts of attenuation. Variations in the average energy of up to 12% were determined through simulations, and future work will aim to determine the effects of these differences on survey meter response and calibration.« less

All-atom molecular dynamics simulations of spin labelled double and single-strand DNA for EPR studies.

PubMed

Prior, C; Danilāne, L; Oganesyan, V S

2018-05-16

We report the first application of fully atomistic molecular dynamics (MD) simulations to the prediction of electron paramagnetic resonance (EPR) spectra of spin labelled DNA. Models for two structurally different DNA spin probes with either the rigid or flexible position of the nitroxide group in the base pair, employed in experimental studies previously, have been developed. By the application of the combined MD-EPR simulation methodology we aimed at the following. Firstly, to provide a test bed against a sensitive spectroscopic technique for the recently developed improved version of the parmbsc1 force field for MD modelling of DNA. The predicted EPR spectra show good agreement with the experimental ones available from the literature, thus confirming the accuracy of the currently employed DNA force fields. Secondly, to provide a quantitative interpretation of the motional contributions into the dynamics of spin probes in both duplex and single-strand DNA fragments and to analyse their perturbing effects on the local DNA structure. Finally, a combination of MD and EPR allowed us to test the validity of the application of the Model-Free (M-F) approach coupled with the partial averaging of magnetic tensors to the simulation of EPR spectra of DNA systems by comparing the resultant EPR spectra with those simulated directly from MD trajectories. The advantage of the M-F based EPR simulation approach over the direct propagation techniques is that it requires motional and order parameters that can be calculated from shorter MD trajectories. The reported MD-EPR methodology is transferable to the prediction and interpretation of EPR spectra of higher order DNA structures with novel types of spin labels.

On the transverse-traceless projection in lattice simulations of gravitational wave production

NASA Astrophysics Data System (ADS)

Figueroa, Daniel G.; García-Bellido, Juan; Rajantie, Arttu

2011-11-01

It has recently been pointed out that the usual procedure employed in order to obtain the transverse-traceless (TT) part of metric perturbations in lattice simulations was inconsistent with the fact that those fields live in the lattice and not in the continuum. It was claimed that this could lead to a larger amplitude and a wrong shape for the gravitational wave (GW) spectra obtained in numerical simulations of (p)reheating. In order to address this issue, we have defined a consistent prescription in the lattice for extracting the TT part of the metric perturbations. We demonstrate explicitly that the GW spectra obtained with the old continuum-based TT projection only differ marginally in amplitude and shape with respect to the new lattice-based ones. We conclude that one can therefore trust the predictions appearing in the literature on the spectra of GW produced during (p)reheating and similar scenarios simulated on a lattice.

Constraining physical parameters of ultra-fast outflows in PDS 456 with Monte Carlo simulations

NASA Astrophysics Data System (ADS)

Hagino, K.; Odaka, H.; Done, C.; Gandhi, P.; Takahashi, T.

2014-07-01

Deep absorption lines with extremely high velocity of ˜0.3c observed in PDS 456 spectra strongly indicate the existence of ultra-fast outflows (UFOs). However, the launching and acceleration mechanisms of UFOs are still uncertain. One possible way to solve this is to constrain physical parameters as a function of distance from the source. In order to study the spatial dependence of parameters, it is essential to adopt 3-dimensional Monte Carlo simulations that treat radiation transfer in arbitrary geometry. We have developed a new simulation code of X-ray radiation reprocessed in AGN outflow. Our code implements radiative transfer in 3-dimensional biconical disk wind geometry, based on Monte Carlo simulation framework called MONACO (Watanabe et al. 2006, Odaka et al. 2011). Our simulations reproduce FeXXV and FeXXVI absorption features seen in the spectra. Also, broad Fe emission lines, which reflects the geometry and viewing angle, is successfully reproduced. By comparing the simulated spectra with Suzaku data, we obtained constraints on physical parameters. We discuss launching and acceleration mechanisms of UFOs in PDS 456 based on our analysis.

Quantitative Interpretation of Multifrequency Multimode EPR Spectra of Metal Containing Proteins, Enzymes, and Biomimetic Complexes.

PubMed

Petasis, Doros T; Hendrich, Michael P

2015-01-01

Electron paramagnetic resonance (EPR) spectroscopy has long been a primary method for characterization of paramagnetic centers in materials and biological complexes. Transition metals in biological complexes have valence d-orbitals that largely define the chemistry of the metal centers. EPR spectra are distinctive for metal type, oxidation state, protein environment, substrates, and inhibitors. The study of many metal centers in proteins, enzymes, and biomimetic complexes has led to the development of a systematic methodology for quantitative interpretation of EPR spectra from a wide array of metal containing complexes. The methodology is now contained in the computer program SpinCount. SpinCount allows simulation of EPR spectra from any sample containing multiple species composed of one or two metals in any spin state. The simulations are quantitative, thus allowing determination of all species concentrations in a sample directly from spectra. This chapter will focus on applications to transition metals in biological systems using EPR spectra from multiple microwave frequencies and modes. © 2015 Elsevier Inc. All rights reserved.

[Performance dependence of organic light-emitting devices on the thickness of Alq3 emitting layer].

PubMed

Lian, Jia-rong; Liao, Qiao-sheng; Yang, Rui-bo; Zheng, Wei; Zeng, Peng-ju

2010-10-01

The dependence of opto-electronical characteristics in organic light-emitting devices on the thickness of Alq3 emitter layer was studied, where MoO3, NPB, and Alq3 were used as hole injector, hole transporter, and emitter/electron transporter, respectively. By increasing the thickness of Alq3 layer from 20 to 100 nm, the device current decreased gradually, and the EL spectra of devices performed a little red shift with an obvious broadening in long wavelength range but a little decrease in intensity of short wavelength range. The authors simulated the EL spectra using the photoluminescence (PL) spectra of Alq3 as Alq3 intrinsic emission, which coincided with the experimental EL spectra well. The simulated results suggested that the effect of interference takes the major role in broadening the long wavelength range of EL spectra, and the distribution of emission zone largely affects the profile of EL spectra in short wavelength range.

Experimental design-based strategy for the simulation of complex gaseous mixture spectra to detect drug precursors

NASA Astrophysics Data System (ADS)

Calderisi, Marco; Ulrici, Alessandro; Pigani, Laura; Secchi, Alberto; Seeber, Renato

2012-09-01

The EU FP7 project CUSTOM (Drugs and Precursor Sensing by Complementing Low Cost Multiple Techniques) aims at developing a new sensing system for the detection of drug precursors in gaseous samples, which includes an External Cavity-Quantum Cascade Laser Photo-Acoustic Sensor (EC-QCLPAS) that is in the final step of realisation. Thus, a simulation based on FT-IR literature spectra has been accomplished, where the development of a proper strategy for the design of the composition of the environment, as much as possible realistic and representative of different scenarios, is of key importance. To this aim, an approach based on the combination of signal processing and experimental design techniques has been developed. The gaseous mixtures were built by adding the considered 4 drug precursor (target) species to the gases typically found in atmosphere, taking also into account possible interfering species. These last chemicals were selected considering custom environments (20 interfering chemical species), whose concentrations have been inferred from literature data. The spectra were first denoised by means of a Fast Wavelet Transform-based algorithm; then, a procedure based on a sigmoidal transfer function was developed to multiply the pure components spectra by the respective concentration values, in a way to correctly preserve background intensity and shape, and to operate only on the absorption bands. The noise structure of the EC-QCLPAS was studied using sample spectra measured with a prototype instrument, and added to the simulated mixtures. Finally a matrix containing 5000 simulated spectra of gaseous mixtures was built up.

Remote sensing reflectance simulation of coastal optical complex water in the East China Sea

NASA Astrophysics Data System (ADS)

He, Shuo; Lou, Xiulin; Zhang, Huaguo; Zheng, Gang

2018-02-01

In this work, remote sensing reflectance (Rrs) spectra of the Zhejiang coastal water in the East China Sea (ECS) were simulated by using the Hydrolight software with field data as input parameters. The seawater along the Zhejiang coast is typical Case II water with complex optical properties. A field observation was conducted in the Zhejiang coastal region in late May of 2016, and the concentration of ocean color constituents (pigment, SPM and CDOM), IOPs (absorption and backscattering coefficients) and Rrs were measured at 24 stations of 3 sections covering the turbid to clear inshore coastal waters. Referring to these ocean color field data, an ocean color model suitable for the Zhejiang coastal water was setup and applied in the Hydrolight. A set of 11 remote sensing reflectance spectra above water surface were modeled and calculated. Then, the simulated spectra were compared with the filed measurements. Finally, the spectral shape and characteristics of the remote sensing reflectance spectra were analyzed and discussed.

Simulation of the energy spectra of original versus recombined H{sub 2}{sup +} molecular ions transmitted through thin foils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barriga-Carrasco, Manuel D.; Garcia-Molina, Rafael

2004-09-01

This work presents the results of computer simulations for the energy spectra of original versus recombined H{sub 2}{sup +} molecular ions transmitted through thin amorphous carbon foils, for a broad range of incident energies. A detailed description of the projectile motion through the target has been done, including nuclear scattering and Coulomb repulsion as well as electronic self-retarding and wake forces; the two latter are calculated in the dielectric formalism framework. Differences in the energy spectra of recombined and original transmitted H{sub 2}{sup +} molecular ions clearly appear in the simulations, in agreement with the available experimental data. Our simulationmore » code also differentiates the contributions due to original and to recombined H{sub 2}{sup +} molecular ions when the energy spectra contain both contributions, a feature that could be used for experimental purposes in estimating the ratio between the number of original and recombined H{sub 2}{sup +} molecular ions transmitted through thin foils.« less

USGS Digital Spectral Library splib06a

USGS Publications Warehouse

Clark, Roger N.; Swayze, Gregg A.; Wise, Richard A.; Livo, K. Eric; Hoefen, Todd M.; Kokaly, Raymond F.; Sutley, Stephen J.

2007-01-01

Introduction We have assembled a digital reflectance spectral library that covers the wavelength range from the ultraviolet to far infrared along with sample documentation. The library includes samples of minerals, rocks, soils, physically constructed as well as mathematically computed mixtures, plants, vegetation communities, microorganisms, and man-made materials. The samples and spectra collected were assembled for the purpose of using spectral features for the remote detection of these and similar materials. Analysis of spectroscopic data from laboratory, aircraft, and spacecraft instrumentation requires a knowledge base. The spectral library discussed here forms a knowledge base for the spectroscopy of minerals and related materials of importance to a variety of research programs being conducted at the U.S. Geological Survey. Much of this library grew out of the need for spectra to support imaging spectroscopy studies of the Earth and planets. Imaging spectrometers, such as the National Aeronautics and Space Administration (NASA) Airborne Visible/Infra Red Imaging Spectrometer (AVIRIS) or the NASA Cassini Visual and Infrared Mapping Spectrometer (VIMS) which is currently orbiting Saturn, have narrow bandwidths in many contiguous spectral channels that permit accurate definition of absorption features in spectra from a variety of materials. Identification of materials from such data requires a comprehensive spectral library of minerals, vegetation, man-made materials, and other subjects in the scene. Our research involves the use of the spectral library to identify the components in a spectrum of an unknown. Therefore, the quality of the library must be very good. However, the quality required in a spectral library to successfully perform an investigation depends on the scientific questions to be answered and the type of algorithms to be used. For example, to map a mineral using imaging spectroscopy and the mapping algorithm of Clark and others (1990a, 2003b), one simply needs a diagnostic absorption band. The mapping system uses continuum-removed reference spectral features fitted to features in observed spectra. Spectral features for such algorithms can be obtained from a spectrum of a sample containing large amounts of contaminants, including those that add other spectral features, as long as the shape of the diagnostic feature of interest is not modified. If, however, the data are needed for radiative transfer models to derive mineral abundances from reflectance spectra, then completely uncontaminated spectra are required. This library contains spectra that span a range of quality, with purity indicators to flag spectra for (or against) particular uses. Acquiring spectral measurements and performing sample characterizations for this library has taken about 15 person-years of effort. Software to manage the library and provide scientific analysis capability is provided (Clark, 1980, 1993). A personal computer (PC) reader for the library is also available (Livo and others, 1993). The program reads specpr binary files (Clark, 1980, 1993) and plots spectra. Another program that reads the specpr format is written in IDL (Kokaly, 2005). In our view, an ideal spectral library consists of samples covering a very wide range of materials, has large wavelength range with very high precision, and has enough sample analyses and documentation to establish the quality of the spectra. Time and available resources limit what can be achieved. Ideally, for each mineral, the sample analysis would include X-ray diffraction (XRD), electron microprobe (EM) or X-ray fluorescence (XRF), and petrographic microscopic analyses. For some minerals, such as iron oxides, additional analyses such as Mossbauer would be helpful. We have found that to make the basic spectral measurements, provide XRD, EM or XRF analyses, and microscopic analyses, document the results, and complete an entry of one spectral library sample, all takes about

Monte Carlo derivation of filtered tungsten anode X-ray spectra for dose computation in digital mammography.

PubMed

Paixão, Lucas; Oliveira, Bruno Beraldo; Viloria, Carolina; de Oliveira, Marcio Alves; Teixeira, Maria Helena Araújo; Nogueira, Maria do Socorro

2015-01-01

Derive filtered tungsten X-ray spectra used in digital mammography systems by means of Monte Carlo simulations. Filtered spectra for rhodium filter were obtained for tube potentials between 26 and 32 kV. The half-value layer (HVL) of simulated filtered spectra were compared with those obtained experimentally with a solid state detector Unfors model 8202031-H Xi R/F & MAM Detector Platinum and 8201023-C Xi Base unit Platinum Plus w mAs in a Hologic Selenia Dimensions system using a direct radiography mode. Calculated HVL values showed good agreement as compared with those obtained experimentally. The greatest relative difference between the Monte Carlo calculated HVL values and experimental HVL values was 4%. The results show that the filtered tungsten anode X-ray spectra and the EGSnrc Monte Carlo code can be used for mean glandular dose determination in mammography.

Magnetic properties of single crystal alpha-benzoin oxime: An EPR study

NASA Astrophysics Data System (ADS)

Sayin, Ulku; Dereli, Ömer; Türkkan, Ercan; Ozmen, Ayhan

2012-02-01

The electron paramagnetic resonance (EPR) spectra of gamma irradiated single crystals of alpha-benzoinoxime (ABO) have been examined between 120 and 440 K. Considering the dependence on temperature and the orientation of the spectra of single crystals in the magnetic field, we identified two different radicals formed in irradiated ABO single crystals. To theoretically determine the types of radicals, the most stable structure of ABO was obtained by molecular mechanic and B3LYP/6-31G(d,p) calculations. Four possible radicals were modeled and EPR parameters were calculated for the modeled radicals using the B3LYP method and the TZVP basis set. Calculated values of two modeled radicals were in strong agreement with experimental EPR parameters determined from the spectra. Additional simulated spectra of the modeled radicals, where calculated hyperfine coupling constants were used as starting points for simulations, were well matched with experimental spectra.

Monte Carlo derivation of filtered tungsten anode X-ray spectra for dose computation in digital mammography*

PubMed Central

Paixão, Lucas; Oliveira, Bruno Beraldo; Viloria, Carolina; de Oliveira, Marcio Alves; Teixeira, Maria Helena Araújo; Nogueira, Maria do Socorro

2015-01-01

Objective Derive filtered tungsten X-ray spectra used in digital mammography systems by means of Monte Carlo simulations. Materials and Methods Filtered spectra for rhodium filter were obtained for tube potentials between 26 and 32 kV. The half-value layer (HVL) of simulated filtered spectra were compared with those obtained experimentally with a solid state detector Unfors model 8202031-H Xi R/F & MAM Detector Platinum and 8201023-C Xi Base unit Platinum Plus w mAs in a Hologic Selenia Dimensions system using a direct radiography mode. Results Calculated HVL values showed good agreement as compared with those obtained experimentally. The greatest relative difference between the Monte Carlo calculated HVL values and experimental HVL values was 4%. Conclusion The results show that the filtered tungsten anode X-ray spectra and the EGSnrc Monte Carlo code can be used for mean glandular dose determination in mammography. PMID:26811553

Use of cloud radar Doppler spectra to evaluate stratocumulus drizzle size distributions in large-eddy simulations with size-resolved microphysics

DOE PAGES

Remillard, J.; Fridlind, Ann M.; Ackerman, A. S.; ...

2017-09-20

Here, a case study of persistent stratocumulus over the Azores is simulated using two independent large-eddy simulation (LES) models with bin microphysics, and forward-simulated cloud radar Doppler moments and spectra are compared with observations. Neither model is able to reproduce the monotonic increase of downward mean Doppler velocity with increasing reflectivity that is observed under a variety of conditions, but for differing reasons. To a varying degree, both models also exhibit a tendency to produce too many of the largest droplets, leading to excessive skewness in Doppler velocity distributions, especially below cloud base. Excessive skewness appears to be associated withmore » an insufficiently sharp reduction in droplet number concentration at diameters larger than ~200 μm, where a pronounced shoulder is found for in situ observations and a sharp reduction in reflectivity size distribution is associated with relatively narrow observed Doppler spectra. Effectively using LES with bin microphysics to study drizzle formation and evolution in cloud Doppler radar data evidently requires reducing numerical diffusivity in the treatment of the stochastic collection equation; if that is accomplished sufficiently to reproduce typical spectra, progress toward understanding drizzle processes is likely.« less

Use of cloud radar Doppler spectra to evaluate stratocumulus drizzle size distributions in large-eddy simulations with size-resolved microphysics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Remillard, J.; Fridlind, Ann M.; Ackerman, A. S.

Here, a case study of persistent stratocumulus over the Azores is simulated using two independent large-eddy simulation (LES) models with bin microphysics, and forward-simulated cloud radar Doppler moments and spectra are compared with observations. Neither model is able to reproduce the monotonic increase of downward mean Doppler velocity with increasing reflectivity that is observed under a variety of conditions, but for differing reasons. To a varying degree, both models also exhibit a tendency to produce too many of the largest droplets, leading to excessive skewness in Doppler velocity distributions, especially below cloud base. Excessive skewness appears to be associated withmore » an insufficiently sharp reduction in droplet number concentration at diameters larger than ~200 μm, where a pronounced shoulder is found for in situ observations and a sharp reduction in reflectivity size distribution is associated with relatively narrow observed Doppler spectra. Effectively using LES with bin microphysics to study drizzle formation and evolution in cloud Doppler radar data evidently requires reducing numerical diffusivity in the treatment of the stochastic collection equation; if that is accomplished sufficiently to reproduce typical spectra, progress toward understanding drizzle processes is likely.« less

ARES I-X USS Fracture Analysis Loads Spectra Development

NASA Technical Reports Server (NTRS)

Larsen, Curtis; Mackey, Alden

2008-01-01

This report describes the development of a set of bounding load spectra for the ARES I-X launch vehicle. These load spectra are used in the determination of the critical initial flaw size (CIFS) of the welds in the ARES I-X upper stage simulator (USS).

Summaries of the Sixth Annual JPL Airborne Earth Science Workshop. Volume 2; AIRSAR Workshop

NASA Technical Reports Server (NTRS)

Kim, Yun-Jin (Editor)

1996-01-01

The Sixth Annual JPL Airborne Earth Science Workshop, held in Pasadena, California, on March 4-8, 1996, was divided into two smaller workshops:(1) The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) workshop, and The Airborne Synthetic Aperture Radar (AIRSAR) workshop. This current paper, Volume 2 of the Summaries of the Sixth Annual JPL Airborne Earth Science Workshop, presents the summaries for The Airborne Synthetic Aperture Radar (AIRSAR) workshop.

Evaluation of Sun Glint Correction Algorithms for High-Spatial Resolution Hyperspectral Imagery

DTIC Science & Technology

2012-09-01

ACRONYMS AND ABBREVIATIONS AISA Airborne Imaging Spectrometer for Applications AVIRIS Airborne Visible/Infrared Imaging Spectrometer BIL Band...sensor bracket mount combining Airborne Imaging Spectrometer for Applications ( AISA ) Eagle and Hawk sensors into a single imaging system (SpecTIR 2011...The AISA Eagle is a VNIR sensor with a wavelength range of approximately 400–970 nm and the AISA Hawk sensor is a SWIR sensor with a wavelength

Reconstructing in-vivo reflectance spectrum of pigmented skin lesion by Monte Carlo simulation

NASA Astrophysics Data System (ADS)

Wang, Shuang; He, Qingli; Zhao, Jianhua; Lui, Harvey; Zeng, Haishan

2012-03-01

In dermatology applications, diffuse reflectance spectroscopy has been extensively investigated as a promising tool for the noninvasive method to distinguish melanoma from benign pigmented skin lesion (nevus), which is concentrated with the skin chromophores like melanin and hemoglobin. We carried out a theoretical study to examine melanin distribution in human skin tissue and establish a practical optical model for further pigmented skin investigation. The theoretical simulation was using junctional nevus as an example. A multiple layer skin optical model was developed on established anatomy structures of skin, the published optical parameters of different skin layers, blood and melanin. Monte Carlo simulation was used to model the interaction between excitation light and skin tissue and rebuild the diffuse reflectance process from skin tissue. A testified methodology was adopted to determine melanin contents in human skin based on in vivo diffuse reflectance spectra. The rebuild diffuse reflectance spectra were investigated by adding melanin into different layers of the theoretical model. One of in vivo reflectance spectra from Junctional nevi and their surrounding normal skin was studied by compare the ratio between nevus and normal skin tissue in both the experimental and simulated diffuse reflectance spectra. The simulation result showed a good agreement with our clinical measurements, which indicated that our research method, including the spectral ratio method, skin optical model and modifying the melanin content in the model, could be applied in further theoretical simulation of pigmented skin lesions.

Impact of pentacene film thickness on the photoresponse spectra: Determination of the photocarrier generation mechanism

NASA Astrophysics Data System (ADS)

Gorgolis, S.; Giannopoulou, A.; Anastassopoulos, D.; Kounavis, P.

2012-07-01

Photocurrent response, optical absorption, and x-ray diffraction (XRD) measurements in pentacene films grown on glass substrates are performed in order to obtain an insight into the mobile photocarriers generation mechanism. For film thickness of the order of 50 nm and lower, the photocurrent response spectra are found to follow the optical absorption spectra demonstrating the so-called symbatic response. Upon increasing the film thickness, the photoresponse demonstrates a transition to the so-called antibatic response, which is characterized by a maximum and minimum photocurrent for photon energies of minimum and maximum optical absorption, respectively. The experimental results are not in accordance with the model of important surface recombination rate. By taking into account the XRD patterns, the experimental photoresponse spectra can be reproduced by model simulations assuming efficient exciton dissociation at a narrow layer of the order of 20 nm near the pentacene-substrate interface. The simulated spectra are found sensitive to the film thickness, the absolute optical absorption coefficient, and the diffusion exciton length. By comparing the experimental with the simulated spectra, it is deduced that the excitons, which are created by optical excitation in the spectral region of 1.7-2.2 eV, diffuse with a diffusion length of the order of 10-80 nm to the pentacene-substrate interface where efficiently dissociate into mobile charge carriers.

Sub-Terrahertz Spectroscopy of E.COLI Dna: Experiment, Statistical Model, and MD Simulations

NASA Astrophysics Data System (ADS)

Sizov, I.; Dorofeeva, T.; Khromova, T.; Gelmont, B.; Globus, T.

2012-06-01

We will present result of combined experimental and computational study of sub-THz absorption spectra from Escherichia coli (E.coli) DNA. Measurements were conducted using a Bruker FTIR spectrometer with a liquid helium cooled bolometer and a recently developed frequency domain sensor operating at room temperature, with spectral resolution of 0.25 cm-1 and 0.03 cm-1, correspondingly. We have earlier demonstrated that molecular dynamics (MD) simulation can be effectively applied for characterizing relatively small biological molecules, such as transfer RNA or small protein thioredoxin from E. coli , and help to understand and predict their absorption spectra. Large size of DNA macromolecules ( 5 million base pairs for E. coli DNA) prevents, however, direct application of MD simulation at the current level of computational capabilities. Therefore, by applying a second order Markov chain approach and Monte-Carlo technique, we have developed a new statistical model to construct DNA sequences from biological cells. These short representative sequences (20-60 base pairs) are built upon the most frequently repeated fragments (2-10 base pairs) in the original DNA. Using this new approach, we constructed DNA sequences for several non-pathogenic strains of E.coli, including a well-known strain BL21, uro-pathogenic strain, CFT073, and deadly EDL933 strain (O157:H7), and used MD simulations to calculate vibrational absorption spectra of these strains. Significant differences are clearly present in spectra of strains in averaged spectra and in all components for particular orientations. The mechanism of interaction of THz radiation with a biological molecule is studied by analyzing dynamics of atoms and correlation of local vibrations in the modeled molecule. Simulated THz vibrational spectra of DNA are compared with experimental results. With the spectral resolution of 0.1 cm-1 or better, which is now available in experiments, the very easy discrimination between different strains of the same bacteria becomes possible.

Estimating radiated flux density from wildland fires using the raw output of limited bandpass detectors

Treesearch

Robert L. Kremens; Matthew B. Dickinson

2015-01-01

We have simulated the radiant emission spectra from wildland fires such as would be observed at a scale encompassing the pre-frontal fuel bed, the flaming front and the zone of post-frontal combustion and cooling. For these simulations, we developed a 'mixed-pixel' model where the fire infrared spectrum is estimated as the linear superposition of spectra of...

Nonlinear Simulation of the Tooth Enamel Spectrum for EPR Dosimetry

NASA Astrophysics Data System (ADS)

Kirillov, V. A.; Dubovsky, S. V.

2016-07-01

Software was developed where initial EPR spectra of tooth enamel were deconvoluted based on nonlinear simulation, line shapes and signal amplitudes in the model initial spectrum were calculated, the regression coefficient was evaluated, and individual spectra were summed. Software validation demonstrated that doses calculated using it agreed excellently with the applied radiation doses and the doses reconstructed by the method of additive doses.

Simulating Ru L3-edge X-ray Absorption Spectroscopy with Time-Dependent Density Functional Theory: Model Complexes and Electron Localization in Mixed-Valence Metal Dimers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Van Kuiken, Benjamin E.; Valiev, Marat; Daifuku, Stephanie L.

2013-05-01

Ruthenium L2,3-edge X-ray absorption (XA) spectroscopy probes transitions from core 2p orbitals to the 4d levels of the atom and is a powerful tool for interrogating the local electronic and molecular structure around the metal atom. However, a molecular-level interpretation of the Ru L2,3-edge spectral lineshapes is often complicated by spin–orbit coupling (SOC) and multiplet effects. In this study, we develop spin-free time-dependent density functional theory (TDDFT) as a viable and predictive tool to simulate the Ru L3-edge spectra. We successfully simulate and analyze the ground state Ru L3-edge XA spectra of a series of RuII and RuIII complexes: [Ru(NH3)6]2+/3+,more » [Ru(CN)6]4-/3-, [RuCl6]4-/3-, and the ground (1A1) and photoexcited (3MLCT) transient states of [Ru(bpy)3]2+ and Ru(dcbpy)2(NCS)2 (termed N3). The TDDFT simulations reproduce all the experimentally observed features in Ru L3-edge XA spectra. The advantage of using TDDFT to assign complicated Ru L3-edge spectra is illustrated by its ability to identify ligand specific charge transfer features in complex molecules. We conclude that the B3LYP functional is the most reliable functional for accurately predicting the location of charge transfer features in these spectra. Experimental and simulated Ru L3-edge XA spectra are presented for the transition metal mixed-valence dimers [(NC)5MII-CN-RuIII(NH3)5]- (where M = Fe or Ru) dissolved in water. We explore the spectral signatures of electron delocalization in Ru L3-edge XA spectroscopy and our simulations reveal that the inclusion of explicit solvent molecules is crucial for reproducing the experimentally determined valencies, highlighting the importance of the role of the solvent in transition metal charge transfer chemistry.« less

Use of a Si(Li) detector as β spectrometer.

PubMed

Dryák, P; Kovář, P

2014-05-01

The aim of this work is to demonstrate the capability of a Si(Li) detector for the measurement of β spectra, despite the energy absorption in air and in the Be window. A simple source holder fixes the source on the symmetry axis at 3mm from the detector window. The β-sources are produced by evaporation on a plastic backing plate. Absorbing materials between the source and the sensitive volume of the detector are 3 mm of air, a Be window, 0.1 μm Si and 20 nm of gold. A model of the detector was created for β spectra simulation using the MCNP 4A code. Experimental spectra of (14)C, (147)Pm, (204)Tl, (90)Sr/(90)Y were compared with simulated spectra. © 2013 Published by Elsevier Ltd.

Monitoring morphology and hydrogen coverage of nanometric Pt/γ-Al2 O3 particles by in situ HERFD-XANES and quantum simulations.

PubMed

Gorczyca, Agnes; Moizan, Virginie; Chizallet, Celine; Proux, Olivier; Del Net, William; Lahera, Eric; Hazemann, Jean-Louis; Raybaud, Pascal; Joly, Yves

2014-11-10

Platinum nanoclusters highly dispersed on γ-alumina are widely used as heterogeneous catalysts. To understand the chemical interplay between the Pt nanoparticles, the support, and the reductive atmosphere, we performed X-ray absorption near edge structure (XANES) in situ experiments recorded in high energy resolution fluorescence detection (HERFD) mode. Spectra are assigned by comparison with simulated XANES spectra on models obtained by molecular dynamics (DFT-MD). We propose platinum cluster morphologies and quantify the hydrogen coverages compatible with XANES spectra recorded at variable hydrogen pressures and temperatures. Using cutting-edge methodologies to assign XANES spectra, this work gives unequalled atomic insights into the characterization of supported nanoclusters. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Effects of inhomogeneity at stagnation in 3D simulations of ICF implosions

NASA Astrophysics Data System (ADS)

Appelbe, Brian

2016-10-01

The stagnation phase of an ICF implosion is characterized by a hotspot and dense fuel layer that are spatially and temporally inhomogeneous. Perturbation growth during the implosion results in significant asymmetry at stagnation while the hotspot size, density and temperature change rapidly, even in non-igniting capsules. Diagnosing these inhomogeneities is necessary to increase yield in ICF experiments. In this work, 3D radiation hydrodynamic simulations of perturbed indirect drive ICF capsules are carried out using the CHIMERA code. During the stagnation phase a suite of novel and computationally efficient simulation tools are used to produce synthetic time-resolved neutron spectra and images. These tools allow a detailed study of the effects of hotspot inhomogeneities on diagnostic signals. Results show that the burn-averaged ion temperature drops rapidly during thermonuclear burn as the hotspot evolves from a localised, shock-heated region to a more massive, non-uniform plasma. Primary DD and DT neutron spectra show that there is significant residual bulk fluid motion at stagnation, complicating the measurement of ion temperature. Different perturbation modes cause different levels of anisotropic spectra shifts and broadening. However, in all cases the discrepancies between the DD and DT spectra are a reliable indicator of residual motion at stagnation. The simulations are used to examine the relationship between neutron scattering and areal density (ρR). Three measures of areal density are simulated: downscattered neutron ratio, attenuated primary neutron yield and nT backscatter edge. Each of these diagnoses the magnitude and anisotropy of the ρR with varying success, with accuracy decreasing for higher mode perturbations. Contributions to the neutron energy spectra from T +T reactions, secondary DT reactions and deuteron break-up are also evaluated.

Modeling Protoplanetary Disks

NASA Astrophysics Data System (ADS)

Holman, Megan; Tubbs, Drake; Keller, L. D.

2018-01-01

Using spectra models with known parameters and comparing them to spectra gathered from real systems is often the only ways to find out what is going on in those real systems. This project uses the modeling programs of RADMC-3D to generate model spectra for systems containing protoplanetary disks. The parameters can be changed to simulate protoplanetary disks in different stages of planet formation, with different sized gaps in different areas of the disks, as well as protoplanetary disks that contain different types of dust. We are working on producing a grid of models that all have different variations in the parameters in order to generate a miniature database to use for comparisons to gathered spectra. The spectra produced from these simulations will be compared to spectra that have been gathered from systems in the Small Magellanic cloud in order to find out the contents and stage of development of that system. This allows us to see if and how planets are forming in the Small Magellanic cloud, a region which has much less metallicity than our own galaxy. The data we gather from comparisons between the model spectra and the spectra of systems in the Small Magellanic Cloud can then be applied to how planets may have formed in the early universe.

THE EFFECT OF BACKGROUND SIGNAL AND ITS REPRESENTATION IN DECONVOLUTION OF EPR SPECTRA ON ACCURACY OF EPR DOSIMETRY IN BONE.

PubMed

Ciesielski, Bartlomiej; Marciniak, Agnieszka; Zientek, Agnieszka; Krefft, Karolina; Cieszyński, Mateusz; Boguś, Piotr; Prawdzik-Dampc, Anita

2016-12-01

This study is about the accuracy of EPR dosimetry in bones based on deconvolution of the experimental spectra into the background (BG) and the radiation-induced signal (RIS) components. The model RIS's were represented by EPR spectra from irradiated enamel or bone powder; the model BG signals by EPR spectra of unirradiated bone samples or by simulated spectra. Samples of compact and trabecular bones were irradiated in the 30-270 Gy range and the intensities of their RIS's were calculated using various combinations of those benchmark spectra. The relationships between the dose and the RIS were linear (R 2  > 0.995), with practically no difference between results obtained when using signals from irradiated enamel or bone as the model RIS. Use of different experimental spectra for the model BG resulted in variations in intercepts of the dose-RIS calibration lines, leading to systematic errors in reconstructed doses, in particular for high- BG samples of trabecular bone. These errors were reduced when simulated spectra instead of the experimental ones were used as the benchmark BG signal in the applied deconvolution procedures. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Probabilistic load simulation: Code development status

NASA Astrophysics Data System (ADS)

Newell, J. F.; Ho, H.

1991-05-01

The objective of the Composite Load Spectra (CLS) project is to develop generic load models to simulate the composite load spectra that are included in space propulsion system components. The probabilistic loads thus generated are part of the probabilistic design analysis (PDA) of a space propulsion system that also includes probabilistic structural analyses, reliability, and risk evaluations. Probabilistic load simulation for space propulsion systems demands sophisticated probabilistic methodology and requires large amounts of load information and engineering data. The CLS approach is to implement a knowledge based system coupled with a probabilistic load simulation module. The knowledge base manages and furnishes load information and expertise and sets up the simulation runs. The load simulation module performs the numerical computation to generate the probabilistic loads with load information supplied from the CLS knowledge base.

Development of PARMA: PHITS-based analytical radiation model in the atmosphere.

PubMed

Sato, Tatsuhiko; Yasuda, Hiroshi; Niita, Koji; Endo, Akira; Sihver, Lembit

2008-08-01

Estimation of cosmic-ray spectra in the atmosphere has been essential for the evaluation of aviation doses. We therefore calculated these spectra by performing Monte Carlo simulation of cosmic-ray propagation in the atmosphere using the PHITS code. The accuracy of the simulation was well verified by experimental data taken under various conditions, even near sea level. Based on a comprehensive analysis of the simulation results, we proposed an analytical model for estimating the cosmic-ray spectra of neutrons, protons, helium ions, muons, electrons, positrons and photons applicable to any location in the atmosphere at altitudes below 20 km. Our model, named PARMA, enables us to calculate the cosmic radiation doses rapidly with a precision equivalent to that of the Monte Carlo simulation, which requires much more computational time. With these properties, PARMA is capable of improving the accuracy and efficiency of the cosmic-ray exposure dose estimations not only for aircrews but also for the public on the ground.

Simulation of electron energy loss spectra of nanomaterials with linear-scaling density functional theory

DOE PAGES

Tait, E. W.; Ratcliff, L. E.; Payne, M. C.; ...

2016-04-20

Experimental techniques for electron energy loss spectroscopy (EELS) combine high energy resolution with high spatial resolution. They are therefore powerful tools for investigating the local electronic structure of complex systems such as nanostructures, interfaces and even individual defects. Interpretation of experimental electron energy loss spectra is often challenging and can require theoretical modelling of candidate structures, which themselves may be large and complex, beyond the capabilities of traditional cubic-scaling density functional theory. In this work, we present functionality to compute electron energy loss spectra within the onetep linear-scaling density functional theory code. We first demonstrate that simulated spectra agree withmore » those computed using conventional plane wave pseudopotential methods to a high degree of precision. The ability of onetep to tackle large problems is then exploited to investigate convergence of spectra with respect to supercell size. As a result, we apply the novel functionality to a study of the electron energy loss spectra of defects on the (1 0 1) surface of an anatase slab and determine concentrations of defects which might be experimentally detectable.« less

Experimental benchmark for an improved simulation of absolute soft-x-ray emission from polystyrene targets irradiated with the Nike laser.

PubMed

Weaver, J L; Busquet, M; Colombant, D G; Mostovych, A N; Feldman, U; Klapisch, M; Seely, J F; Brown, C; Holland, G

2005-02-04

Absolutely calibrated, time-resolved spectral intensity measurements of soft-x-ray emission (hnu approximately 0.1-1.0 keV) from laser-irradiated polystyrene targets are compared to radiation-hydrodynamic simulations that include our new postprocessor, Virtual Spectro. This new capability allows a unified, detailed treatment of atomic physics and radiative transfer in nonlocal thermodynamic equilibrium conditions for simple spectra from low-Z materials as well as complex spectra from high-Z materials. The excellent agreement (within a factor of approximately 1.5) demonstrates the powerful predictive capability of the codes for the complex conditions in the ablating plasma. A comparison to data with high spectral resolution (E/deltaE approximately 1000) emphasizes the importance of including radiation coupling in the quantitative simulation of emission spectra.

Laboratory simulation of infrared astrophysical features. Ph.D. Thesis; [emission spectra of comets

NASA Technical Reports Server (NTRS)

Rose, L. A.

1977-01-01

Intermediate resolution emission spectroscopy was used to study a group of 9 terrestrial silicates, 1 synthetic silicate, 6 meteorites and 2 lunar soils; comparisons were made with the intermediate resolution spectra of Comet Kohoutek in order to determine which materials best simulate the 10um astrophysical feature. Mixtures of silicates which would yield spectra matching the spectrum of the comet in the 10um region include: (1) A hydrous layer lattice silicate in combination with a high temperature condensate; (2) an amorphous magnesium silicate in combination with a high temperature condensate and (3) glassy olivine and glassy anorthite in approximately equal proportions.

Integrating remote sensing techniques at Cuprite, Nevada: AVIRIS, Thematic Mapper, and field spectroscopy

NASA Technical Reports Server (NTRS)

Hill, Bradley; Nash, Greg; Ridd, Merrill; Hauff, Phoebe L.; Ebel, Phil

1992-01-01

The Cuprite mining district in southwestern Nevada has become a test site for remote sensing studies with numerous airborne scanners and ground sensor data sets collected over the past fifteen years. Structurally, the Cuprite region can be divided into two areas with slightly different alteration and mineralogy. These zones lie on either side of a postulated low-angle structural discontinuity that strikes nearly parallel to US Route 95. Hydrothermal alternation at Cuprite was classified into three major zones: silicified, opalized, and argillized. These alteration types form a bulls-eye pattern east of the highway and are more linear on the west side of the highway making a striking contrast from the air and the imagery. Cuprite is therefore an ideal location for remote sensing research as it exhibits easily identified hydrothermal zoning, is relatively devoid of vegetation, and contains a distinctive spectrally diagnostic mineral suite including the ammonium feldspar buddingtonite, several types of alunite, different jarosites, illite, kaolinite, smectite, dickite, and opal. This present study brings a new dimension to these previous remote sensing and ground data sets compiled for Cuprite. The development of a higher resolution field spectrometer now provides the capability to combine extensive in-situ mineralogical data with a new geologic field survey and detailed Airborne Visible/Infrared Imaging Spectrometers (AVIRIS) images. The various data collection methods and the refinement of the integrated techniques are discussed.

Measuring dry plant residues in grasslands: A case study using AVIRIS

NASA Technical Reports Server (NTRS)

Fitzgerald, Michael; Ustin, Susan L.

1992-01-01

Grasslands, savannah, and hardwood rangelands are critical ecosystems and sensitive to disturbance. Approximately 20 percent of the Earth's surface are grasslands and represent 3 million ha. in California alone. Developing a methodology for estimating disturbance and the effects of cumulative impacts on grasslands and rangelands is needed to effectively monitor these ecosystems. Estimating the dry biomass residue remaining on rangelands at the end of the growing season provides a basis for evaluating the effectiveness of land management practices. The residual biomass is indicative of the grazing pressure and provides a measure of the system capacity for nutrient cycling since it represents the maximum organic matter available for decomposition, and finally, provides a measure of the erosion potential for the ecosystem. Remote sensing presents a possible method for measuring dry residue. However, current satellites have had limited application due to the coarse spatial scales (relative to the patch dynamics) and insensitivity of the spectral coverage to resolve dry plant material. Several hypotheses for measuring the biochemical constituents of dry plant material, particularly cellulose and lignin, using high spectral resolution sensors were proposed. The use of Airborne Visible/Infrared Imaging Spectrometers (AVIRIS) to measure dry plant residues over an oak savannah on the eastern slopes of the Coast Range in central California was investigated and it was asked what spatial and spectral resolutions are needed to quantitatively measure dry plant biomass in this ecosystem.

Discrimination of poorly exposed lithologies in AVIRIS data

NASA Technical Reports Server (NTRS)

Farrand, William H.; Harsanyi, Joseph C.

1993-01-01

One of the advantages afforded by imaging spectrometers such as AVIRIS is the capability to detect target materials at a sub-pixel scale. This paper presents several examples of the identification of poorly exposed geologic materials - materials which are either subpixel in scale or which, while having some surface expression over several pixels, are partially covered by vegetation or other materials. Sabol et al. (1992) noted that a primary factor in the ability to distinguish sub-pixel targets is the spectral contrast between the target and its surroundings. In most cases, this contrast is best expressed as an absorption feature or features present in the target but absent in the surroundings. Under such circumstances, techniques such as band depth mapping (Clark et al., 1992) are feasible. However, the only difference between a target material and its surroundings is often expressed solely in the continuum. We define the 'continuum' as the reflectance or radiance spanning spectral space between spectral features. Differences in continuum slope and shape can only be determined by reduction techniques which considers the entire spectral range; i.e., techniques such as spectral mixture analysis (Adams et al., 1989) and recently developed techniques which utilize an orthogonal subspace projection operator (Harsanyi, 1993). Two of the three examples considered herein deal with cases where the target material differs from its surroundings only by such a subtle continuum change.

A First: NASA Spots Single Methane Leak from Space

NASA Image and Video Library

2016-06-14

Atmospheric methane is a potent greenhouse gas, but the percentage of it produced through human activities is still poorly understood. Future instruments on orbiting satellites can help address this issue by surveying human-produced methane emissions. Recent data from the Aliso Canyon event, a large accidental methane release near Porter Ranch, California, demonstrates this capability. The Hyperion imaging spectrometer onboard NASA's EO-1 satellite successfully detected this release event on three different overpasses during the winter of 2015-2016. This is the first time the methane plume from a single facility has been observed from space. The orbital observations were consistent with airborne measurements. This image pair shows a comparison of detected methane plumes over Aliso Canyon, California, acquired 11 days apart in Jan. 2016 by: (left) NASA's AVIRIS instrument on a NASA ER-2 aircraft at 4.1 miles (6.6 kilometers) altitude and (right) by the Hyperion instrument on NASA's Earth Observing-1 satellite in low-Earth orbit. The additional red streaks visible in the EO-1 Hyperion image result from measurement noise -- Hyperion was not specifically designed for methane sensing and is not as sensitive as AVIRIS-NG. Additionally, the EO-1 satellite's current orbit provided poor illumination conditions. Future instruments with much greater sensitivity on orbiting satellites can survey the biggest sources of human-produced methane around the world. http://photojournal.jpl.nasa.gov/catalog/PIA20716

Molecular dynamic simulations of N2-broadened methane line shapes and comparison with experiments

NASA Astrophysics Data System (ADS)

Le, Tuong; Doménech, José-Luis; Lepère, Muriel; Tran, Ha

2017-03-01

Absorption spectra of methane transitions broadened by nitrogen have been calculated for the first time using classical molecular dynamic simulations. For that, the time evolution of the auto-correlation function of the dipole moment vector, assumed along a C-H axis, was computed using an accurate site-site intermolecular potential for CH4-N2. Quaternion coordinates were used to treat the rotation of the molecules. A requantization procedure was applied to the classical rotation and spectra were then derived as the Fourier-Laplace transform of the auto-correlation function. These computed spectra were compared with experimental ones recorded with a tunable diode laser and a difference-frequency laser spectrometer. Specifically, nine isolated methane lines broadened by nitrogen, belonging to various vibrational bands and having rotational quantum numbers J from 0 to 9, were measured at room temperature and at several pressures from 20 to 945 mbar. Comparisons between measured and calculated spectra were made through their fits using the Voigt profile. The results show that ab initio calculated spectra reproduce with very high fidelity non-Voigt effects on the measurements and that classical molecular dynamic simulations can be used to predict spectral shapes of isolated lines of methane perturbed by nitrogen.

First-principles study of the infrared spectra of the ice Ih (0001) surface

DOE PAGES

Pham, T. Anh; Huang, P.; Schwegler, E.; ...

2012-08-22

Here, we present a study of the infrared (IR) spectra of the (0001) deuterated ice surface based on first-principles molecular dynamics simulations. The computed spectra show a good agreement with available experimental IR measurements. We identified the bonding configurations associated with specific features in the spectra, allowing us to provide a detailed interpretation of IR signals. We computed the spectra of several proton ordered and disordered models of the (0001) surface of ice, and we found that IR spectra do not appear to be a sensitive probe of the microscopic arrangement of protons at ice surfaces.

Simulation of gamma-ray spectra for a variety of user-specified detector designs

NASA Technical Reports Server (NTRS)

Rester, A. C., Jr.

1994-01-01

The gamma-ray spectrum simulation program BSIMUL was designed to allow the operator to follow the path of a gamma-ray through a detector, shield and collimator whose dimensions are entered by the operator. It can also be used to simulate spectra that would be generated by a detector. Several improvements have been made to the program within the last few months. The detector, shield and collimator dimensions can now be entered through an interactive menu whose options are discussed below. In addition, spectra containing more than one gamma-ray energy can now be generated with the menu - for isotopes listed in the program. Adding isotopes to the main routine is also quite easy. Subroutines have been added to enable the operator to specify the material and dimensions of a collimator. This report details the progress made in simulating gamma-ray spectra for a variety of user-specified detector designs. In addition, a short discussion of work done in the related areas of pulse shape analysis and the spectral analysis is included. The pulse shape analysis and spectral analysis work is being performed pursuant to the requirements of contract F-94-C-0006, for the Advanced Research Projects Agency and the U.S. Air Force.

Spin-correlated doublet pairs as intermediate states in charge separation processes

NASA Astrophysics Data System (ADS)

Kraffert, Felix; Behrends, Jan

2017-10-01

Spin-correlated charge-carrier pairs play a crucial role as intermediate states in charge separation both in natural photosynthesis as well as in solar cells. Using transient electron paramagnetic resonance (trEPR) spectroscopy in combination with spectral simulations, we study spin-correlated polaron pairs in polymer:fullerene blends as organic solar cells materials. The semi-analytical simulations presented here are based on the well-established theoretical description of spin-correlated radical pairs in biological systems, however, explicitly considering the disordered nature of polymer:fullerene blends. The large degree of disorder leads to the fact that many different relative orientations between both polarons forming the spin-correlated pairs have to be taken into account. This has important implications for the spectra, which differ significantly from those of spin-correlated radical pairs with a fixed relative orientation. We systematically study the influence of exchange and dipolar couplings on the trEPR spectra and compare the simulation results to measured X- and Q-band trEPR spectra. Our results demonstrate that assuming dipolar couplings alone does not allow us to reproduce the experimental spectra. Due to the rather delocalised nature of polarons in conjugated organic semiconductors, a significant isotropic exchange coupling needs to be included to achieve good agreement between experiments and simulations.

Energy spectra of X-ray clusters of galaxies

NASA Technical Reports Server (NTRS)

Avni, Y.

1976-01-01

A procedure for estimating the ranges of parameters that describe the spectra of X-rays from clusters of galaxies is presented. The applicability of the method is proved by statistical simulations of cluster spectra; such a proof is necessary because of the nonlinearity of the spectral functions. Implications for the spectra of the Perseus, Coma, and Virgo clusters are discussed. The procedure can be applied in more general problems of parameter estimation.

Vibrationally resolved photoelectron spectra of lower diamondoids: A time-dependent approach

NASA Astrophysics Data System (ADS)

Xiong, Tao; Włodarczyk, Radosław; Gallandi, Lukas; Körzdörfer, Thomas; Saalfrank, Peter

2018-01-01

Vibrationally resolved lowest-energy bands of the photoelectron spectra (PES) of adamantane, diamantane, and urotropine were simulated by a time-dependent correlation function approach within the harmonic approximation. Geometries and normal modes for neutral and cationic molecules were obtained from B3LYP hybrid density functional theory (DFT). It is shown that the simulated spectra reproduce the experimentally observed vibrational finestructure (or its absence) quite well. Origins of the finestructure are discussed and related to recurrences of autocorrelation functions and dominant vibrations. Remaining quantitative and qualitative errors of the DFT-derived PES spectra refer to (i) an overall redshift by ˜0.5 eV and (ii) the absence of satellites in the high-energy region of the spectra. The former error is shown to be due to the neglect of many-body corrections to ordinary Kohn-Sham methods, while the latter has been argued to be due to electron-nuclear couplings beyond the Born-Oppenheimer approximation [Gali et al., Nat. Commun. 7, 11327 (2016)].

Structural elucidation of direct analysis in real time ionized nerve agent simulants with infrared multiple photon dissociation spectroscopy.

PubMed

Rummel, Julia L; Steill, Jeffrey D; Oomens, Jos; Contreras, Cesar S; Pearson, Wright L; Szczepanski, Jan; Powell, David H; Eyler, John R

2011-06-01

Infrared multiple photon dissociation (IRMPD) was used to generate vibrational spectra of ions produced with a direct analysis in real time (DART) ionization source coupled to a 4.7 T Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometer. The location of protonation on the nerve agent simulants diisopropyl methylphosphonate (DIMP) and dimethyl methylphosphonate (DMMP) was studied while solutions of the compounds were introduced for extended periods of time with a syringe pump. Theoretical vibrational spectra were generated with density functional theory calculations. Visual comparison of experimental mid-IR IRMPD spectra and theoretical spectra could not establish definitively if a single structure or a mixture of conformations was present for the protonated parent of each compound. However, theoretical calculations, near-ir IRMPD spectra, and frequency-to-frequency and statistical comparisons indicated that the protonation site for both DIMP and DMMP was predominantly, if not exclusively, the phosphonyl oxygen instead of one of the oxygen atoms with only single bonds.

Simulated infrared spectra of triflic acid during proton dissociation.

PubMed

Laflamme, Patrick; Beaudoin, Alexandre; Chapaton, Thomas; Spino, Claude; Soldera, Armand

2012-05-05

Vibrational analysis of triflic acid (TfOH) at different water uptakes was conducted. This molecule mimics the sulfonate end of the Nafion side-chain. As the proton leaves the sulfonic acid group, structural changes within the Nafion side-chain take place. They are revealed by signal shifts in the infrared spectrum. Molecular modeling is used to follow structural modifications that occur during proton dissociation. To confirm the accuracy of the proposed structures, infrared spectra were computed via quantum chemical modeling based on density functional theory. The requirement to use additional diffuse functions in the basis set is discussed. Comparison between simulated infrared spectra of 1 and 2 acid molecules with different water contents and experimental data was performed. An accurate description of infrared spectra for systems containing 2 TfOH was obtained. Copyright © 2012 Wiley Periodicals, Inc.

Preprocessing: Geocoding of AVIRIS data using navigation, engineering, DEM, and radar tracking system data

NASA Technical Reports Server (NTRS)

Meyer, Peter; Larson, Steven A.; Hansen, Earl G.; Itten, Klaus I.

1993-01-01

Remotely sensed data have geometric characteristics and representation which depend on the type of the acquisition system used. To correlate such data over large regions with other real world representation tools like conventional maps or Geographic Information System (GIS) for verification purposes, or for further treatment within different data sets, a coregistration has to be performed. In addition to the geometric characteristics of the sensor there are two other dominating factors which affect the geometry: the stability of the platform and the topography. There are two basic approaches for a geometric correction on a pixel-by-pixel basis: (1) A parametric approach using the location of the airplane and inertial navigation system data to simulate the observation geometry; and (2) a non-parametric approach using tie points or ground control points. It is well known that the non-parametric approach is not reliable enough for the unstable flight conditions of airborne systems, and is not satisfying in areas with significant topography, e.g. mountains and hills. The present work describes a parametric preprocessing procedure which corrects effects of flight line and attitude variation as well as topographic influences and is described in more detail by Meyer.

Unfolding the prompt gamma ray spectra measured in a Lanthanum Bromide detector using GRAVEL method

NASA Astrophysics Data System (ADS)

De, S.; Thomas, R. G.; Rout, P. C.; Suryanarayana, S. V.; Nayak, B. K.; Saxena, A.

2018-02-01

Prompt fission Upsilon -ray energy spectra in spontaneous fission of 252Cf has been measured using a 6'' LaBr3(Ce) detector. Unfolding of the measured Upsilon -ray energy spectra has been carried out using GRAVEL method. The response matrix of the detector has been simulated using GEANT4 and the unfolding of Upsilon -ray energy spectra for 60Co and 137Cs sources have been validated. This unfolding technique has then been applied to the prompt gamma spectra obtained from the spontaneous fission of 252Cf.

An Approach for Peptide Identification by De Novo Sequencing of Mixture Spectra.

PubMed

Liu, Yi; Ma, Bin; Zhang, Kaizhong; Lajoie, Gilles

2017-01-01

Mixture spectra occur quite frequently in a typical wet-lab mass spectrometry experiment, which result from the concurrent fragmentation of multiple precursors. The ability to efficiently and confidently identify mixture spectra is essential to alleviate the existent bottleneck of low mass spectra identification rate. However, most of the traditional computational methods are not suitable for interpreting mixture spectra, because they still take the assumption that the acquired spectra come from the fragmentation of a single precursor. In this manuscript, we formulate the mixture spectra de novo sequencing problem mathematically, and propose a dynamic programming algorithm for the problem. Additionally, we use both simulated and real mixture spectra data sets to verify the merits of the proposed algorithm.

Simulating Ru L 3 -Edge X-ray Absorption Spectroscopy with Time-Dependent Density Functional Theory: Model Complexes and Electron Localization in Mixed-Valence Metal Dimers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Van Kuiken, Benjamin E.; Valiev, Marat; Daifuku, Stephanie L.

2013-05-30

Ruthenium L3-edge X-ray absorption (XA) spectroscopy probes unoccupied 4d orbitals of the metal atom and is increasingly being used to investigate the local electronic structure in ground and excited electronic states of Ru complexes. The simultaneous development of computational tools for simulating Ru L3-edge spectra is crucial for interpreting the spectral features at a molecular level. This study demonstrates that time-dependent density functional theory (TDDFT) is a viable and predictive tool for simulating ruthenium L3-edge XA spectroscopy. We systematically investigate the effects of exchange correlation functional and implicit and explicit solvent interactions on a series of RuII and RuIII complexesmore » in their ground and electronic excited states. The TDDFT simulations reproduce all of the experimentally observed features in Ru L3-edge XA spectra within the experimental resolution (0.4 eV). Our simulations identify ligand-specific charge transfer features in complicated Ru L3-edge spectra of [Ru(CN)6]4- and RuII polypyridyl complexes illustrating the advantage of using TDDFT in complex systems. We conclude that the B3LYP functional most accurately predicts the transition energies of charge transfer features in these systems. We use our TDDFT approach to simulate experimental Ru L3-edge XA spectra of transition metal mixed-valence dimers of the form [(NC)5MII-CN-RuIII(NH3)5] (where M = Fe or Ru) dissolved in water. Our study determines the spectral signatures of electron delocalization in Ru L3-edge XA spectra. We find that the inclusion of explicit solvent molecules is necessary for reproducing the spectral features and the experimentally determined valencies in these mixed-valence complexes. This study validates the use of TDDFT for simulating Ru 2p excitations using popular quantum chemistry codes and providing a powerful interpretive tool for equilibrium and ultrafast Ru L3-edge XA spectroscopy.« less

A high-resolution oxygen A-band spectrometer (HABS) and its radiation closure

NASA Astrophysics Data System (ADS)

Min, Q.; Yin, B.; Li, S.; Berndt, J.; Harrison, L.; Joseph, E.; Duan, M.; Kiedron, P.

2014-06-01

Various studies indicate that high-resolution oxygen A-band spectrum has the capability to retrieve the vertical profiles of aerosol and cloud properties. To improve the understanding of oxygen A-band inversions and utility, we developed a high-resolution oxygen A-band spectrometer (HABS), and deployed it at Howard University Beltsville site during the NASA Discover Air-Quality Field Campaign in July, 2011. By using a single telescope, the HABS instrument measures the direct solar and the zenith diffuse radiation subsequently. HABS exhibits excellent performance: stable spectral response ratio, high signal-to-noise ratio (SNR), high-spectrum resolution (0.016 nm), and high out-of-band rejection (10-5). For the spectral retrievals of HABS measurements, a simulator is developed by combining a discrete ordinates radiative transfer code (DISORT) with the High Resolution Transmission (HITRAN) database HITRAN2008. The simulator uses a double-k approach to reduce the computational cost. The HABS-measured spectra are consistent with the related simulated spectra. For direct-beam spectra, the discrepancies between measurements and simulations, indicated by confidence intervals (95%) of relative difference, are (-0.06, 0.05) and (-0.08, 0.09) for solar zenith angles of 27 and 72°, respectively. For zenith diffuse spectra, the related discrepancies between measurements and simulations are (-0.06, 0.05) and (-0.08, 0.07) for solar zenith angles of 27 and 72°, respectively. The main discrepancies between measurements and simulations occur at or near the strong oxygen absorption line centers. They are mainly due to two kinds of causes: (1) measurement errors associated with the noise/spikes of HABS-measured spectra, as a result of combined effects of weak signal, low SNR, and errors in wavelength registration; (2) modeling errors in the simulation, including the error of model parameters setting (e.g., oxygen absorption line parameters, vertical profiles of temperature and pressure) and the lack of treatment of the rotational Raman scattering. The high-resolution oxygen A-band measurements from HABS can constrain the active radar retrievals for more accurate cloud optical properties (e.g., cloud optical depth, effective radius), particularly for multi-layer clouds and for mixed-phase clouds.

Radiometry simulation within the end-to-end simulation tool SENSOR

NASA Astrophysics Data System (ADS)

Wiest, Lorenz; Boerner, Anko

2001-02-01

12 An end-to-end simulation is a valuable tool for sensor system design, development, optimization, testing, and calibration. This contribution describes the radiometry module of the end-to-end simulation tool SENSOR. It features MODTRAN 4.0-based look up tables in conjunction with a cache-based multilinear interpolation algorithm to speed up radiometry calculations. It employs a linear reflectance parameterization to reduce look up table size, considers effects due to the topology of a digital elevation model (surface slope, sky view factor) and uses a reflectance class feature map to assign Lambertian and BRDF reflectance properties to the digital elevation model. The overall consistency of the radiometry part is demonstrated by good agreement between ATCOR 4-retrieved reflectance spectra of a simulated digital image cube and the original reflectance spectra used to simulate this image data cube.

Advanced Space Shuttle simulation model

NASA Technical Reports Server (NTRS)

Tatom, F. B.; Smith, S. R.

1982-01-01

A non-recursive model (based on von Karman spectra) for atmospheric turbulence along the flight path of the shuttle orbiter was developed. It provides for simulation of instantaneous vertical and horizontal gusts at the vehicle center-of-gravity, and also for simulation of instantaneous gusts gradients. Based on this model the time series for both gusts and gust gradients were generated and stored on a series of magnetic tapes, entitled Shuttle Simulation Turbulence Tapes (SSTT). The time series are designed to represent atmospheric turbulence from ground level to an altitude of 120,000 meters. A description of the turbulence generation procedure is provided. The results of validating the simulated turbulence are described. Conclusions and recommendations are presented. One-dimensional von Karman spectra are tabulated, while a discussion of the minimum frequency simulated is provided. The results of spectral and statistical analyses of the SSTT are presented.

Comparison of experimental proton-induced fluorescence spectra for a selection of thin high-Z samples with Geant4 Monte Carlo simulations

NASA Astrophysics Data System (ADS)

Incerti, S.; Barberet, Ph.; Dévès, G.; Michelet, C.; Francis, Z.; Ivantchenko, V.; Mantero, A.; El Bitar, Z.; Bernal, M. A.; Tran, H. N.; Karamitros, M.; Seznec, H.

2015-09-01

The general purpose Geant4 Monte Carlo simulation toolkit is able to simulate radiative and non-radiative atomic de-excitation processes such as fluorescence and Auger electron emission, occurring after interaction of incident ionising radiation with target atomic electrons. In this paper, we evaluate the Geant4 modelling capability for the simulation of fluorescence spectra induced by 1.5 MeV proton irradiation of thin high-Z foils (Fe, GdF3, Pt, Au) with potential interest for nanotechnologies and life sciences. Simulation results are compared to measurements performed at the Centre d'Etudes Nucléaires de Bordeaux-Gradignan AIFIRA nanobeam line irradiation facility in France. Simulation and experimental conditions are described and the influence of Geant4 electromagnetic physics models is discussed.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lizarraga, Joanes; Urrestilla, Jon; Daverio, David

We present cosmic microwave background (CMB) power spectra from recent numerical simulations of cosmic strings in the Abelian Higgs model and compare them to CMB power spectra measured by Planck . We obtain revised constraints on the cosmic string tension parameter G μ. For example, in the ΛCDM model with the addition of strings and no primordial tensor perturbations, we find G μ < 2.0 × 10{sup −7} at 95% confidence, about 20% lower than the value obtained from previous simulations, which had 1/64 of the spatial volume. The increased computational volume also makes it possible to simulate fully themore » physical equations of motion, in which the string cores shrink in comoving coordinates. We find however that this, and the larger dynamic range, changes the amplitude of the power spectra by only about 10%. The main cause of the stronger constraints on G μ is instead an improved treatment of the string evolution across the radiation-matter transition.« less

HITRAN Application Programming Interface (HAPI): A comprehensive approach to working with spectroscopic data

NASA Astrophysics Data System (ADS)

Kochanov, R. V.; Gordon, I. E.; Rothman, L. S.; Wcisło, P.; Hill, C.; Wilzewski, J. S.

2016-07-01

The HITRAN Application Programming Interface (HAPI) is presented. HAPI is a free Python library, which extends the capabilities of the HITRANonline interface (www.hitran.org) and can be used to filter and process the structured spectroscopic data. HAPI incorporates a set of tools for spectra simulation accounting for the temperature, pressure, optical path length, and instrument properties. HAPI is aimed to facilitate the spectroscopic data analysis and the spectra simulation based on the line-by-line data, such as from the HITRAN database [JQSRT (2013) 130, 4-50], allowing the usage of the non-Voigt line profile parameters, custom temperature and pressure dependences, and partition sums. The HAPI functions allow the user to control the spectra simulation and data filtering process via a set of the function parameters. HAPI can be obtained at its homepage www.hitran.org/hapi.

A laboratory study of the perceived benefit of additional noise attenuation by houses

NASA Technical Reports Server (NTRS)

Flindell, I. H.

1983-01-01

Two Experiments were conducted to investigate the perceived benefit of additional house attenuation against aircraft flyover noise. First, subjects made annoyance judgments in a simulated living room while an operative window with real and dummy storm windows was manipulated in full view of those subjects. Second, subjects made annoyance judgments in an anechoic audiometric test chamber of frequency shaped noise signals having spectra closely matched to those of the aircraft flyover noises reproduced in the first experiment. These stimuli represented the aircraft flyover noises in levels and spectra but without the situational and visual cues present in the simulated living room. Perceptual constancy theory implies that annoyance tends to remain constant despite reductions in noise level caused by additional attenuation of which the subjects are fully aware. This theory was supported when account was taken for a reported annoyance overestimation for certain spectra and for a simulated condition cue overreaction.

First light: exploring the spectra of high-redshift galaxies in the Renaissance Simulations

NASA Astrophysics Data System (ADS)

Barrow, Kirk S. S.; Wise, John H.; Norman, Michael L.; O'Shea, Brian W.; Xu, Hao

2017-08-01

We present synthetic observations for the first generations of galaxies in the Universe and make predictions for future deep field observations for redshifts greater than 6. Due to the strong impact of nebular emission lines and the relatively compact scale of H II regions, high-resolution cosmological simulations and a robust suite of analysis tools are required to properly simulate spectra. We created a software pipeline consisting of fsps, hyperion, cloudy and our own tools to generate synthetic IR observations from a fully three-dimensional arrangement of gas, dust, and stars. Our prescription allows us to include emission lines for a complete chemical network and tackle the effect of dust extinction and scattering in the various lines of sight. We provide spectra, 2D binned photon imagery for both HST and JWST IR filters, luminosity relationships, and emission-line strengths for a large sample of high-redshift galaxies in the Renaissance Simulations. Our resulting synthetic spectra show high variability between galactic haloes with a strong dependence on stellar mass, metallicity, gas mass fraction, and formation history. Haloes with the lowest stellar mass have the greatest variability in [O III]/Hβ, [O III], and C III], while haloes with higher masses are seen to show consistency in their spectra and [O III] equivalent widths between 1 and 10 Å. Viewing angle accounted for threefold difference in flux due to the presence of ionized gas channels in a halo. Furthermore, JWST colour plots show a discernible relationship between redshift, colour, and mean stellar age.

New Measurement of the Flux of Atmospheric Muons

NASA Astrophysics Data System (ADS)

Boezio, M.; Carlson, P.; Francke, T.; Weber, N.; Suffert, M.; Hof, M.; Menn, W.; Simon, M.; Stephens, S. A.; Bellotti, R.; Cafagna, F.; Castellano, M.; Circella, M.; de Marzo, C.; Grimani, C.; Finetti, N.; Papini, P.; Piccardi, S.; Spillantini, P.; Ricci, M.; Casolino, M.; de Pascale, M. P.; Morselli, A.; Picozza, P.; Sparvoli, R.; Barbiellini, G.; Bravar, U.; Schiavon, P.; Vacchi, A.; Zampa, N.; Mitchell, J. W.; Ormes, J. F.; Streitmatter, R. E.; Golden, R. L.; Stochaj, S. J.

1999-06-01

We report a new measurement of the momentum spectra of both positive and negative muons as a function of atmospheric depth in the momentum range 0.3-2 and 0.3-40 GeV/c, respectively. The measured flux values have been compared with the spectra obtained from simulations, which were carried out to interpret the atmospheric neutrino data. We find that our data disagree with the results from the simulations. The ratio of the flux of muons derived from simulations to that measured is at largest 1.8 and varies with atmospheric depth and muon momentum.

Numerical Simulation of the Anomalous Transport of High-Energy Cosmic Rays in Galactic Superbubble

NASA Technical Reports Server (NTRS)

Barghouty, A. F.; Price, E. M.; MeWaldt, R. A.

2013-01-01

A continuous-time random-walk (CTRW) model to simulate the transport and acceleration of high-energy cosmic rays in galactic superbubbles has recently been put forward (Barghouty & Schnee 2102). The new model has been developed to simulate and highlight signatures of anomalous transport on particles' evolution and their spectra in a multi-shock, collective acceleration context. The superbubble is idealized as a heterogeneous region of particle sources and sinks bounded by a random surface. This work concentrates on the effects of the bubble's assumed astrophysical characteristics (cf. geometry and roughness) on the particles' spectra.

Applications of principal component analysis to breath air absorption spectra profiles classification

NASA Astrophysics Data System (ADS)

Kistenev, Yu. V.; Shapovalov, A. V.; Borisov, A. V.; Vrazhnov, D. A.; Nikolaev, V. V.; Nikiforova, O. Y.

2015-12-01

The results of numerical simulation of application principal component analysis to absorption spectra of breath air of patients with pulmonary diseases are presented. Various methods of experimental data preprocessing are analyzed.

Characterization of Artifacts Introduced by the Empirical Volcano-Scan Atmospheric Correction Commonly Applied to CRISM and OMEGA Near-Infrared Spectra

NASA Technical Reports Server (NTRS)

Wiseman, S.M.; Arvidson, R.E.; Wolff, M. J.; Smith, M. D.; Seelos, F. P.; Morgan, F.; Murchie, S. L.; Mustard, J. F.; Morris, R. V.; Humm, D.;

Characterization of artifacts introduced by the empirical volcano-scan atmospheric correction commonly applied to CRISM and OMEGA near-infrared spectra

NASA Astrophysics Data System (ADS)

Wiseman, S. M.; Arvidson, R. E.; Wolff, M. J.; Smith, M. D.; Seelos, F. P.; Morgan, F.; Murchie, S. L.; Mustard, J. F.; Morris, R. V.; Humm, D.; McGuire, P. C.

2016-05-01

The empirical 'volcano-scan' atmospheric correction is widely applied to martian near infrared CRISM and OMEGA spectra between ∼1000 and ∼2600 nm to remove prominent atmospheric gas absorptions with minimal computational investment. This correction method employs division by a scaled empirically-derived atmospheric transmission spectrum that is generated from observations of the martian surface in which different path lengths through the atmosphere were measured and transmission calculated using the Beer-Lambert Law. Identifying and characterizing both artifacts and residual atmospheric features left by the volcano-scan correction is important for robust interpretation of CRISM and OMEGA volcano-scan corrected spectra. In order to identify and determine the cause of spectral artifacts introduced by the volcano-scan correction, we simulated this correction using a multiple scattering radiative transfer algorithm (DISORT). Simulated transmission spectra that are similar to actual CRISM- and OMEGA-derived transmission spectra were generated from modeled Olympus Mons base and summit spectra. Results from the simulations were used to investigate the validity of assumptions inherent in the volcano-scan correction and to identify artifacts introduced by this method of atmospheric correction. We found that the most prominent artifact, a bowl-shaped feature centered near 2000 nm, is caused by the inaccurate assumption that absorption coefficients of CO2 in the martian atmosphere are independent of column density. In addition, spectral albedo and slope are modified by atmospheric aerosols. Residual atmospheric contributions that are caused by variable amounts of dust aerosols, ice aerosols, and water vapor are characterized by the analysis of CRISM volcano-scan corrected spectra from the same location acquired at different times under variable atmospheric conditions.

Towards Standardization of X-ray Beam Filters in Digital Mammography and Digital Breast Tomosynthesis: Monte Carlo simulations and analytical modelling

PubMed Central

Shrestha, Suman; Vedantham, Srinivasan; Karellas, Andrew

2017-01-01

In digital breast tomosynthesis and digital mammography, the x-ray beam filter material and thickness vary between systems. Replacing K-edge filters with Al was investigated with the intent to reduce exposure duration and to simplify system design. Tungsten target x-ray spectra were simulated with K-edge filters (50μm Rh; 50μm Ag) and Al filters of varying thickness. Monte Carlo simulations were conducted to quantify the x-ray scatter from various filters alone, scatter-to-primary ratio (SPR) with compressed breasts, and to determine the radiation dose to the breast. These data were used to analytically compute the signal-difference-to-noise ratio (SDNR) at unit (1 mGy) mean glandular dose (MGD) for W/Rh and W/Ag spectra. At SDNR matched between K-edge and Al filtered spectra, the reductions in exposure duration and MGD were quantified for three strategies: (i) fixed Al thickness and matched tube potential in kilovolts (kV); (ii) fixed Al thickness and varying the kV to match the half-value layer (HVL) between Al and K-edge filtered spectra; and, (iii) matched kV and varying the Al thickness to match the HVL between Al and K-edge filtered spectra. Monte Carlo simulations indicate that the SPR with and without the breast were not different between Al and K-edge filters. Modelling for fixed Al thickness (700μm) and kV matched to K-edge filtered spectra, identical SDNR was achieved with 37–57% reduction in exposure duration and with 2–20% reduction in MGD, depending on breast thickness. Modelling for fixed Al thickness (700μm) and HVL matched by increasing the kV over [0,4] range, identical SDNR was achieved with 62–65% decrease in exposure duration and with 2–24% reduction in MGD, depending on breast thickness. For kV and HVL matched to K-edge filtered spectra by varying Al filter thickness over [700,880]μm range, identical SDNR was achieved with 23–56% reduction in exposure duration and 2–20% reduction in MGD, depending on breast thickness. These simulations indicate that increased fluence with Al filter of fixed or variable thickness substantially decreases exposure duration while providing for similar image quality with moderate reduction in MGD. PMID:28075335

Stochastic ground-motion simulation of two Himalayan earthquakes: seismic hazard assessment perspective

NASA Astrophysics Data System (ADS)

Harbindu, Ashish; Sharma, Mukat Lal; Kamal

2012-04-01

The earthquakes in Uttarkashi (October 20, 1991, M w 6.8) and Chamoli (March 8, 1999, M w 6.4) are among the recent well-documented earthquakes that occurred in the Garhwal region of India and that caused extensive damage as well as loss of life. Using strong-motion data of these two earthquakes, we estimate their source, path, and site parameters. The quality factor ( Q β ) as a function of frequency is derived as Q β ( f) = 140 f 1.018. The site amplification functions are evaluated using the horizontal-to-vertical spectral ratio technique. The ground motions of the Uttarkashi and Chamoli earthquakes are simulated using the stochastic method of Boore (Bull Seismol Soc Am 73:1865-1894, 1983). The estimated source, path, and site parameters are used as input for the simulation. The simulated time histories are generated for a few stations and compared with the observed data. The simulated response spectra at 5% damping are in fair agreement with the observed response spectra for most of the stations over a wide range of frequencies. Residual trends closely match the observed and simulated response spectra. The synthetic data are in rough agreement with the ground-motion attenuation equation available for the Himalayas (Sharma, Bull Seismol Soc Am 98:1063-1069, 1998).

Evaluation of Am–Li neutron spectra data for active well type neutron multiplicity measurements of uranium

DOE PAGES

Goddard, Braden; Croft, Stephen; Lousteau, Angela; ...

2016-05-25

Safeguarding nuclear material is an important and challenging task for the international community. One particular safeguards technique commonly used for uranium assay is active neutron correlation counting. This technique involves irradiating unused uranium with ( α,n) neutrons from an Am-Li source and recording the resultant neutron pulse signal which includes induced fission neutrons. Although this non-destructive technique is widely employed in safeguards applications, the neutron energy spectra from an Am-Li sources is not well known. Several measurements over the past few decades have been made to characterize this spectrum; however, little work has been done comparing the measured spectra ofmore » various Am-Li sources to each other. This paper examines fourteen different Am-Li spectra, focusing on how these spectra affect simulated neutron multiplicity results using the code Monte Carlo N-Particle eXtended (MCNPX). Two measurement and simulation campaigns were completed using Active Well Coincidence Counter (AWCC) detectors and uranium standards of varying enrichment. The results of this work indicate that for standard AWCC measurements, the fourteen Am-Li spectra produce similar doubles and triples count rates. Finally, the singles count rates varied by as much as 20% between the different spectra, although they are usually not used in quantitative analysis.« less

An RGB approach to extraordinary spectra

NASA Astrophysics Data System (ADS)

Grusche, Sascha; Theilmann, Florian

2015-09-01

After Newton had explained a series of ordinary spectra and Goethe had pointed out its complementary counterpart, Nussbaumer discovered a series of extraordinary spectra which are geometrically identical and colourwise analogous to Newton’s and Goethe’s spectra. To understand the geometry and colours of extraordinary spectra, the wavelength composition is explored with filters and spectroscopic setups. Visualized in a dispersion diagram, the wavelength composition is interpreted in terms of additive colour mixing. Finally, all spectra are simulated as the superposition of red, green, and blue images that are shifted apart. This RGB approach makes it easy to understand the complex relationship between wavelengths and colours.

Reflectance spectra characteristics from an SPR grating fabricated by nano-imprint lithography technique for biochemical nanosensor applications

NASA Astrophysics Data System (ADS)

Setiya Pradana, Jalu; Hidayat, Rahmat

2018-04-01

In this paper, we report our research work on developing a Surface Plasmon Resonance (SPR) element with sub-micron (hundreds of nanometers) periodicity grating structure. This grating structure was fabricated by using a simple nano-imprint lithography technique from an organically siloxane polymers, which was then covered by nanometer thin gold layer. The formed grating structure was a very well defined square-shaped periodic structure. The measured reflectance spectra indicate the SPR wave excitation on this grating structure. For comparison, the simulations of reflectance spectra have been also carried out by using Rigorous Coupled-Wave Analysis (RCWA) method. The experimental results are in very good agreement with the simulation results.

ExoCross: Spectra from molecular line lists

NASA Astrophysics Data System (ADS)

Yurchenko, Sergei N.; Al-Refaie, Ahmed; Tennyson, Jonathan

2018-03-01

ExoCross generates spectra and thermodynamic properties from molecular line lists in ExoMol, HITRAN, or several other formats. The code is parallelized and also shows a high degree of vectorization; it works with line profiles such as Doppler, Lorentzian and Voigt and supports several broadening schemes. ExoCross is also capable of working with the recently proposed method of super-lines. It supports calculations of lifetimes, cooling functions, specific heats and other properties. ExoCross converts between different formats, such as HITRAN, ExoMol and Phoenix, and simulates non-LTE spectra using a simple two-temperature approach. Different electronic, vibronic or vibrational bands can be simulated separately using an efficient filtering scheme based on the quantum numbers.

Summaries of the Sixth Annual JPL Airborne Earth Science Workshop, March 4-8, 1996. Volume 2; AIRSAR Workshop

NASA Technical Reports Server (NTRS)

Kim, Yunjin (Editor)

1996-01-01

This publication contains the summaries for the Sixth Annual JPL Airborne Earth Science Workshop, held in Pasadena, California, on March 4-8, 1996. The main workshop is divided into two smaller workshops as follows: The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) workshop, on March 4-6. The summaries for this workshop appear in Volume 1. The Airborne Synthetic Aperture Radar (AIRSAR) workshop, on March 6-8. The summaries for this workshop appear in Volume 2.

Ocean PHILLS Hyperspectral Imager: Design, Characterization, and Calibration

DTIC Science & Technology

2002-02-25

SPIE 3753, 2-11 (1999). 7. J. Bowles, M. Kappus , J. Antoniades, M. Baumback, M Czarnaski, C. O. Davis, and J. Grossmann, “Calibration of inexpensive...Infrared Imaging Spectrometer (AVIRIS),” Remote Sens. Environ. 65, 227-248 (1998). 9. R. G. Resmini, M. E. Kappus , W. S. Aldrich, J. C. Harsanyi, and M...and spatial information,” Appl. Opt. 39, 2210-2220 (2000). 19. R. A. Leathers, T. V. Downes, W. A. Snyder, J. H. Bowles, C. O. Davis, M. E. Kappus , M