Uncertainty in the net hydrologic flux of calcium in a paired-watershed harvesting study

Treesearch

John Campbell; Ruth D. Yanai; Mark B. Green; Gene E. Likens; Craig R. See; Amey S. Bailey; Donald C. Buso; Daqing Yang

2016-01-01

Monitoring solutes in precipitation inputs and stream water exports at small watersheds has greatly advanced our understanding of biogeochemical cycling. Surprisingly, although inputs to and outputs from ecosystems are instrumental to understanding sources and sinks of nutrients and other elements, uncertainty in these fluxes is rarely reported in ecosystem budgets. We...

Comparison of copepod collection efficiencies by three commonly used plankton nets: A case study in Bohai Sea, China

NASA Astrophysics Data System (ADS)

Chen, Hongju; Yu, Hao; Liu, Guangxing

2016-12-01

Selection of net with a suitable mesh size is a key concern in the quantitative assessment of zooplankton, which is crucial to understand pelagic ecosystem processes. This study compared the copepod collecting efficiency of three commonly used plankton nets, namely, the China standard coarse net (505 μm mesh), the China standard fine net (77 μm), and the WP-2 net (200 μm). The experiment was performed at six stations in the Bohai Sea during the autumn of 2012. The coarse net substantially under-sampled small individuals (body widths < 672 μm) and led to the lowest species number in each tow, whereas the fine net collected all small copepod species but failed to collect rare species. The WP-2 net appeared to be a compromise of the two other nets, collecting both small copepods and rare species. The abundance of copepods collected by the coarse net (126.4 ± 86.5 ind m-3) was one to two orders of magnitude lower than that by the WP-2 net (5802.4 ± 2595.4 ind m-3), and the value of the fine net (11117.0 ± 4563.41 ind m-3) was nearly twice that of the WP-2 net. The abundance of large copepods ( i.e., adult Calanus sinicus) in the three nets showed no significant differences, but the abundance of small copepods declined with decreasing mesh size. The difference in abundance resulted from the under-sampling of small copepods with body widths < 672 μm and < 266 μm by the coarse and WP-2 nets, respectively.

ScaleNet: a literature-based model of scale insect biology and systematics.

PubMed

García Morales, Mayrolin; Denno, Barbara D; Miller, Douglass R; Miller, Gary L; Ben-Dov, Yair; Hardy, Nate B

2016-01-01

Scale insects (Hemiptera: Coccoidea) are small herbivorous insects found on all continents except Antarctica. They are extremely invasive, and many species are serious agricultural pests. They are also emerging models for studies of the evolution of genetic systems, endosymbiosis and plant-insect interactions. ScaleNet was launched in 1995 to provide insect identifiers, pest managers, insect systematists, evolutionary biologists and ecologists efficient access to information about scale insect biological diversity. It provides comprehensive information on scale insects taken directly from the primary literature. Currently, it draws from 23,477 articles and describes the systematics and biology of 8194 valid species. For 20 years, ScaleNet ran on the same software platform. That platform is no longer viable. Here, we present a new, open-source implementation of ScaleNet. We have normalized the data model, begun the process of correcting invalid data, upgraded the user interface, and added online administrative tools. These improvements make ScaleNet easier to use and maintain and make the ScaleNet data more accurate and extendable. Database URL: http://scalenet.info. Published by Oxford University Press 2016. This work is written by US Government employees and is in the public domain in the US.

Progress and prospects for field cultivation of Iridaea cordata and Gigartina exasperata

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mumford, T.F. Jr.; Waaland, J.R.

1980-01-01

Research on cultivation of two carrageenan producing seaweeds, Iridaea cordatas and Gigartina exasperata, has resulted in 60 net units, each 1.2 x 18 m outplanted in the inland marine waters of Washington State. This paper traces the progress from beginning field and laboratory studies that demonstrated the biological feasibility of growing these species on artificial substrates, to current commercial sized net modules. The results achieved with these species are compared with other experimental, pilot, and commercial-scale red algal cultivation efforts. Methods are given here for inoculating nets and outplanting them in small, intermediate and commercial-scale net modules which can bemore » used to determine the feasibility of cultivating these or other species in various localities. A brief summary of supporting research which has been accomplished, which is in progress, and which needs to be done is also given. The outlook for expanded seaweed cultivation is promising and its potential great for providing new and expanded sources of chemicals, food, and biomass.« less

Ecological footprint analysis of environmental impacts by cascaded exploitation of diversion-type small hydropower: a case study in southwest china

NASA Astrophysics Data System (ADS)

Wang, Zhenhua; Li, Qingyun; Huang, Zhuo; Tang, Xianqiang; Zhao, Weihua

2017-05-01

Cascaded exploitation of diversion-type small hydropower (SHP) offers a source of new energy as well as socioeconomic benefits; however, it inevitably causes environmental disturbance and damage. Previous studies on the cumulative effect of cascaded diversion SHP rarely discussed using quantitative analysis method. In this paper, the ecological footprint analysis approach is proposed to assess the positive and negative impacts of cascaded diversion SHP on environment of a small-scale river in Southwest China. Positive impact is defined as ecological supply footprint (ESF), which refers to vegetation protection by replacing firewood with SHP. Negative impact is defined as ecological loss footprint (ELF), which includes fish and net primary productivity loss, vegetation destruction and soil erosion. With the raising in the number (n>4) of diversion SHP stations, the difference between ELF and ESF increases remarkably, suggesting that the adverse impacts of cascaded diversion SHP accumulate in the study area. Compared with vegetation destruction and soil erosion, the cumulative loss of fish and net productivity is the most important aspect of the adverse impacts which needs more attentions.

CO2 and CH4 exchanges between land ecosystems and the atmosphere in northern high latitudes over the 21st century

USGS Publications Warehouse

Zhuang, Q.; Melillo, J.M.; Sarofim, M.C.; Kicklighter, D.W.; McGuire, A.D.; Felzer, B.S.; Sokolov, A.; Prinn, R.G.; Steudler, P.A.; Hu, S.

2006-01-01

Terrestrial ecosystems of the northern high latitudes (above 50??N) exchange large amounts of CO2 and CH4 with the atmosphere each year. Here we use a process-based model to estimate the budget of CO 2 and CH4 of the region for current climate conditions and for future scenarios by considering effects of permafrost dynamics, CO 2 fertilization of photosynthesis and fire. We find that currently the region is a net source of carbon to the atmosphere at 276 Tg C yr -1. We project that throughout the 21st century, the region will most likely continue as a net source of carbon and the source will increase by up to 473 Tg C yr-1 by the end of the century compared to the current emissions. However our coupled carbon and climate model simulations show that these emissions will exert relatively small radiative forcing on global climate system compared to large amounts of anthropogenic emissions. Copyright 2006 by the American Geophysical Union.

SpectralNET – an application for spectral graph analysis and visualization

PubMed Central

Forman, Joshua J; Clemons, Paul A; Schreiber, Stuart L; Haggarty, Stephen J

2005-01-01

Background Graph theory provides a computational framework for modeling a variety of datasets including those emerging from genomics, proteomics, and chemical genetics. Networks of genes, proteins, small molecules, or other objects of study can be represented as graphs of nodes (vertices) and interactions (edges) that can carry different weights. SpectralNET is a flexible application for analyzing and visualizing these biological and chemical networks. Results Available both as a standalone .NET executable and as an ASP.NET web application, SpectralNET was designed specifically with the analysis of graph-theoretic metrics in mind, a computational task not easily accessible using currently available applications. Users can choose either to upload a network for analysis using a variety of input formats, or to have SpectralNET generate an idealized random network for comparison to a real-world dataset. Whichever graph-generation method is used, SpectralNET displays detailed information about each connected component of the graph, including graphs of degree distribution, clustering coefficient by degree, and average distance by degree. In addition, extensive information about the selected vertex is shown, including degree, clustering coefficient, various distance metrics, and the corresponding components of the adjacency, Laplacian, and normalized Laplacian eigenvectors. SpectralNET also displays several graph visualizations, including a linear dimensionality reduction for uploaded datasets (Principal Components Analysis) and a non-linear dimensionality reduction that provides an elegant view of global graph structure (Laplacian eigenvectors). Conclusion SpectralNET provides an easily accessible means of analyzing graph-theoretic metrics for data modeling and dimensionality reduction. SpectralNET is publicly available as both a .NET application and an ASP.NET web application from . Source code is available upon request. PMID:16236170

SpectralNET--an application for spectral graph analysis and visualization.

PubMed

Forman, Joshua J; Clemons, Paul A; Schreiber, Stuart L; Haggarty, Stephen J

2005-10-19

Graph theory provides a computational framework for modeling a variety of datasets including those emerging from genomics, proteomics, and chemical genetics. Networks of genes, proteins, small molecules, or other objects of study can be represented as graphs of nodes (vertices) and interactions (edges) that can carry different weights. SpectralNET is a flexible application for analyzing and visualizing these biological and chemical networks. Available both as a standalone .NET executable and as an ASP.NET web application, SpectralNET was designed specifically with the analysis of graph-theoretic metrics in mind, a computational task not easily accessible using currently available applications. Users can choose either to upload a network for analysis using a variety of input formats, or to have SpectralNET generate an idealized random network for comparison to a real-world dataset. Whichever graph-generation method is used, SpectralNET displays detailed information about each connected component of the graph, including graphs of degree distribution, clustering coefficient by degree, and average distance by degree. In addition, extensive information about the selected vertex is shown, including degree, clustering coefficient, various distance metrics, and the corresponding components of the adjacency, Laplacian, and normalized Laplacian eigenvectors. SpectralNET also displays several graph visualizations, including a linear dimensionality reduction for uploaded datasets (Principal Components Analysis) and a non-linear dimensionality reduction that provides an elegant view of global graph structure (Laplacian eigenvectors). SpectralNET provides an easily accessible means of analyzing graph-theoretic metrics for data modeling and dimensionality reduction. SpectralNET is publicly available as both a .NET application and an ASP.NET web application from http://chembank.broad.harvard.edu/resources/. Source code is available upon request.

Considerations of net present value in policy making regarding diagnostic and therapeutic technologies.

PubMed

Califf, Robert M; Rasiel, Emma B; Schulman, Kevin A

2008-11-01

The pharmaceutical and medical device industries function in a business environment in which shareholders expect companies to optimize profit within legal and ethical standards. A fundamental tool used to optimize decision making is the net present value calculation, which estimates the current value of cash flows relating to an investment. We examined 3 prototypical research investment decisions that have been the source of public scrutiny to illustrate how policy decisions can be better understood when their impact on societally desirable investments by industry are viewed from the standpoint of their impact on net present value. In the case of direct, comparative clinical trials, a simple net present value calculation provides insight into why companies eschew such investments. In the case of pediatric clinical trials, the Pediatric Extension Rule changed the net present value calculation from unattractive to potentially very attractive by allowing patent extensions; thus, the dramatic increase in pediatric clinical trials can be explained by the financial return on investment. In the case of products for small markets, the fixed costs of development make this option financially unattractive. Policy decisions can be better understood when their impact on societally desirable investments by the pharmaceutical and medical device industries are viewed from the standpoint of their impact on net present value.

Management of gastric and duodenal neuroendocrine tumors

PubMed Central

Sato, Yuichi; Hashimoto, Satoru; Mizuno, Ken-ichi; Takeuchi, Manabu; Terai, Shuji

2016-01-01

Gastrointestinal neuroendocrine tumors (GI-NETs) are rare neoplasms, like all NETs. However, the incidence of GI-NETS has been increasing in recent years. Gastric NETs (G-NETs) and duodenal NETs (D-NETs) are the common types of upper GI-NETs based on tumor location. G-NETs are classified into three distinct subgroups: type I, II, and III. Type I G-NETs, which are the most common subtype (70%-80% of all G-NETs), are associated with chronic atrophic gastritis, including autoimmune gastritis and Helicobacter pylori associated atrophic gastritis. Type II G-NETs (5%-6%) are associated with multiple endocrine neoplasia type 1 and Zollinger-Ellison syndrome (MEN1-ZES). Both type I and II G-NETs are related to hypergastrinemia, are small in size, occur in multiple numbers, and are generally benign. In contrast, type III G-NETs (10%-15%) are not associated with hypergastrinemia, are large-sized single tumors, and are usually malignant. Therefore, surgical resection and chemotherapy are generally necessary for type III G-NETs, while endoscopic resection and follow-up, which are acceptable for the treatment of most type I and II G-NETs, are only acceptable for small and well differentiated type III G-NETs. D-NETs include gastrinomas (50%-60%), somatostatin-producing tumors (15%), nonfunctional serotonin-containing tumors (20%), poorly differentiated neuroendocrine carcinomas (< 3%), and gangliocytic paragangliomas (< 2%). Most D-NETs are located in the first or second part of the duodenum, with 20% occurring in the periampullary region. Therapy for D-NETs is based on tumor size, location, histological grade, stage, and tumor type. While endoscopic resection may be considered for small nonfunctional D-NETs (G1) located in the higher papilla region, surgical resection is necessary for most other D-NETs. However, there is no consensus regarding the ideal treatment of D-NETs. PMID:27570419

Shifting the Arctic Carbon Balance: Effects of a Long-Term Fertilization Experiment and Anomalously Warm Temperatures on Net Ecosystem Exchange in the Alaskan Tundra

NASA Astrophysics Data System (ADS)

Ludwig, S.; Natali, S.; Rastetter, E. B.; Shaver, G. R.; Graham, L. M.; Jastrow, J. D.

2017-12-01

The arctic is warming at an accelerated rate relative to the globe. Among the predicted consequences of warming temperatures in the arctic are increased gross primary productivity (GPP), ecosystem respiration (ER), and nutrient availability. The net effect of these changes on the carbon (C) cycle and resulting C balance and feedback to climate change remain unclear. Historically the Arctic has been a C sink, but evidence from recent years suggests some regions in the Arctic are becoming C sources. To predict the role of the Arctic in global C cycling, the mechanisms affecting arctic C balances need to be better resolved. We measured net ecosystem exchange (NEE) in a long-term, multi-level, fertilization experiment at Toolik Lake, AK during an anomalously warm summer. We modeled NEE, ER, and GPP using a Bayesian network model. The best-fit model included Q10 temperature functions and linear fertilization functions for both ER and GPP. ER was more strongly affected by temperature and GPP was driven more by fertilization level. As a result, fertilization increased the C sink capacity, but only at moderate and low temperatures. At high temperatures (>28 °C) the NEE modeled for the highest level of fertilization was not significantly different from zero. In contrast, at ambient nutrient levels modeled NEE was significantly below zero (net uptake) until 35 °C, when it becomes neutral. Regardless of the level of fertilization, NEE never decreased with warming. Temperature in low ranges (5-15°C) had no net effect on NEE, whereas NEE began to increase exponentially with temperature after a threshold of 15°C until becoming a net source to the atmosphere at 37°C. Our results indicate that the C sink strength of tundra ecosystems can be increased with small increases in nutrient availability, but that large increase in nutrient availability can switch tundra ecosystems into C sources under warm conditions. Warming temperatures in tundra ecosystems will only decrease C sink strength, and the continued increase in days with anomalously high summer temperatures could lead to the Arctic tundra becoming a source of C and a positive feed back to climate change.

Development of a time-stepping sediment budget model for assessing land use impacts in large river basins.

PubMed

Wilkinson, S N; Dougall, C; Kinsey-Henderson, A E; Searle, R D; Ellis, R J; Bartley, R

2014-01-15

The use of river basin modelling to guide mitigation of non-point source pollution of wetlands, estuaries and coastal waters has become widespread. To assess and simulate the impacts of alternate land use or climate scenarios on river washload requires modelling techniques that represent sediment sources and transport at the time scales of system response. Building on the mean-annual SedNet model, we propose a new D-SedNet model which constructs daily budgets of fine sediment sources, transport and deposition for each link in a river network. Erosion rates (hillslope, gully and streambank erosion) and fine sediment sinks (floodplains and reservoirs) are disaggregated from mean annual rates based on daily rainfall and runoff. The model is evaluated in the Burdekin basin in tropical Australia, where policy targets have been set for reducing sediment and nutrient loads to the Great Barrier Reef (GBR) lagoon from grazing and cropping land. D-SedNet predicted annual loads with similar performance to that of a sediment rating curve calibrated to monitored suspended sediment concentrations. Relative to a 22-year reference load time series at the basin outlet derived from a dynamic general additive model based on monitoring data, D-SedNet had a median absolute error of 68% compared with 112% for the rating curve. RMS error was slightly higher for D-SedNet than for the rating curve due to large relative errors on small loads in several drought years. This accuracy is similar to existing agricultural system models used in arable or humid environments. Predicted river loads were sensitive to ground vegetation cover. We conclude that the river network sediment budget model provides some capacity for predicting load time-series independent of monitoring data in ungauged basins, and for evaluating the impact of land management on river sediment load time-series, which is challenging across large regions in data-poor environments. © 2013. Published by Elsevier B.V. All rights reserved.

Net Thermal Radiation in the Atmosphere of Venus

NASA Technical Reports Server (NTRS)

Revercomb, H. E.; Sromovsky, L. A.; Suomi, V. E.; Boese, R. W.

1985-01-01

The four entry probes of the Pioneer Venus mission measured the radiative net flux in the atmosphere of Venus at latitudes of 60 deg. N, 31 deg. S, 27 deg. S, and 4 deg. N. The three higher latitude probes carried instruments (small probe net flux radiometers; SNFR) with external sensors. The measured SNFR net fluxes are too large below the clouds, but an error source and correction scheme have been found (H. E. Revercomb, L. A. Sromovsky, and V. E. Suomi, 1982, Icarus 52, 279-300). The near-equatorial probe carried an infrared radiometer (LIR) which viewed the atmosphere through a window in the probe. The LIR measurements are reasonable in the clouds, but increase to physically unreasonable levels shortly below the clouds. The probable error source and a correction procedure are identified. Three main conclusions can be drawn from comparisons of the four corrected flux profiles with radiative transfer calculations: (1) thermal net fluxes for the sounder probe do not require a reduction in the Mode 3 number density as has been suggested by O.B. Toon, B. Ragent, D. Colburn, J. Blamont, and C. Cot (1964. Icarus 37, 143-160), but the probe measurements as a whole are most consistent with a significantly reduced mode 3 contribution to the cloud opacity; (2) at all probe sites, the fluxes imply that the upper cloud contains a yet undetected source of IR opacity; and (3) beneath the clouds the fluxes at a given altitude increase with latitude, suggesting greater IR cooling below the clouds a( high latitudes and water vapor mixing ratios of about 2-5 x 10(exp -5) near 6 deg., 2-5 x 10(exp -11) near 30 deg., and less than 5 x 10(exp -4 ) near the equator. The suggested latitudinal variation of IR cooling is consistent with descending motions at high latitudes, and it is speculated that it could provide an important additional drive for the general circulation.

Uncertainty in predictions of forest carbon dynamics: separating driver error from model error.

PubMed

Spadavecchia, L; Williams, M; Law, B E

2011-07-01

We present an analysis of the relative magnitude and contribution of parameter and driver uncertainty to the confidence intervals on estimates of net carbon fluxes. Model parameters may be difficult or impractical to measure, while driver fields are rarely complete, with data gaps due to sensor failure and sparse observational networks. Parameters are generally derived through some optimization method, while driver fields may be interpolated from available data sources. For this study, we used data from a young ponderosa pine stand at Metolius, Central Oregon, and a simple daily model of coupled carbon and water fluxes (DALEC). An ensemble of acceptable parameterizations was generated using an ensemble Kalman filter and eddy covariance measurements of net C exchange. Geostatistical simulations generated an ensemble of meteorological driving variables for the site, consistent with the spatiotemporal autocorrelations inherent in the observational data from 13 local weather stations. Simulated meteorological data were propagated through the model to derive the uncertainty on the CO2 flux resultant from driver uncertainty typical of spatially extensive modeling studies. Furthermore, the model uncertainty was partitioned between temperature and precipitation. With at least one meteorological station within 25 km of the study site, driver uncertainty was relatively small ( 10% of the total net flux), while parameterization uncertainty was larger, 50% of the total net flux. The largest source of driver uncertainty was due to temperature (8% of the total flux). The combined effect of parameter and driver uncertainty was 57% of the total net flux. However, when the nearest meteorological station was > 100 km from the study site, uncertainty in net ecosystem exchange (NEE) predictions introduced by meteorological drivers increased by 88%. Precipitation estimates were a larger source of bias in NEE estimates than were temperature estimates, although the biases partly compensated for each other. The time scales on which precipitation errors occurred in the simulations were shorter than the temporal scales over which drought developed in the model, so drought events were reasonably simulated. The approach outlined here provides a means to assess the uncertainty and bias introduced by meteorological drivers in regional-scale ecological forecasting.

Catch of channel catfish with tandem-set hoop nets and gill nets in lentic systems of Nebraska

USGS Publications Warehouse

Richters, Lindsey K.; Pope, Kevin L.

2011-01-01

Twenty-six Nebraska water bodies representing two ecosystem types (small standing waters and large standing waters) were surveyed during 2008 and 2009 with tandem-set hoop nets and experimental gill nets to determine if similar trends existed in catch rates and size structures of channel catfish Ictalurus punctatus captured with these gears. Gear efficiency was assessed as the number of sets (nets) that would be required to capture 100 channel catfish given observed catch per unit effort (CPUE). Efficiency of gill nets was not correlated with efficiency of hoop nets for capturing channel catfish. Small sample sizes prohibited estimation of proportional size distributions in most surveys; in the four surveys for which sample size was sufficient to quantify length-frequency distributions of captured channel catfish, distributions differed between gears. The CPUE of channel catfish did not differ between small and large water bodies for either gear. While catch rates of hoop nets were lower than rates recorded in previous studies, this gear was more efficient than gill nets at capturing channel catfish. However, comparisons of size structure between gears may be problematic.

On the Potential of Hydrogen-Powered Hydraulic Pumps for Soft Robotics.

PubMed

Desbiens, Alexandre B; Bigué, Jean-Philippe Lucking; Véronneau, Catherine; Masson, Patrice; Iagnemma, Karl; Plante, Jean-Sébastien

2017-12-01

To perform untethered operations, soft robots require mesoscale power units (10-1000 W) with high energy densities. In this perspective, air-breathing combustion offers an interesting alternative to battery-powered systems, provided sufficient overall energy conversion efficiency can be reached. Implementing efficient air-breathing combustion in mesoscale soft robots is notoriously difficult, however, as it requires optimization of very small combustion actuators and simultaneous minimization of fluidic (e.g., hydraulic) losses, which are both inversely impacted by actuations speeds. To overcome such challenges, this article proposes and evaluates the potential of hydrogen-powered, hydraulic free-piston pump architecture. Experimental data, taken from two combustion-driven prototypes, reveal (1) the fundamental role of using hydrogen as the source of fuel to reduce heat losses, (2) the significant impact of compression ratio, equivalence ratio, and surface-to-volume ratio on energy conversion efficiency, and (3) the importance of load matching between combustion and fluidic transmission. In this work, a small-bore combustion actuator demonstrated a 20% efficiency and a net mean output power of 26 W, while a big-bore combustion actuator reached a substantially higher efficiency of 35% and a net mean output power of 197 W. Using the small-bore combustion actuator, the hydrogen-powered, hydraulic free-piston pump provided a 4.6% overall efficiency for a 2.34 W net mean output power, thus underlying the potential of the approach for mesoscale soft robotic applications.

Net Reaction Rate and Neutrino Cooling Rate for the Urca Process in Departure from Chemical Equilibrium in the Crust of Fast-accreting Neutron Stars

NASA Astrophysics Data System (ADS)

Wang, Wei-Hua; Huang, Xi; Zheng, Xiao-Ping

We discuss the effect of compression on Urca shells in the ocean and crust of accreting neutron stars, especially in superbursting sources. We find that Urca shells may be deviated from chemical equilibrium in neutron stars which accrete at several tenths of the local Eddington accretion rate. The deviation depends on the energy threshold of the parent and daughter nuclei, the transition strength, the temperature, and the local accretion rate. In a typical crust model of accreting neutron stars, the chemical departures range from a few tenths of kBT to tens of kBT for various Urca pairs. If the Urca shell can exist in crusts of accreting neutron stars, compression may enhance the net neutrino cooling rate by a factor of about 1-2 relative to the neutrino emissivity in chemical equilibrium. For some cases, such as Urca pairs with small energy thresholds and/or weak transition strength, the large chemical departure may result in net heating rather than cooling, although the released heat can be small. Strong Urca pairs in the deep crust are hard to be deviated even in neutron stars accreting at the local Eddington accretion rate.

Air ion concentrations in various urban outdoor environments

NASA Astrophysics Data System (ADS)

Ling, Xuan; Jayaratne, Rohan; Morawska, Lidia

2010-06-01

Atmospheric ions are produced by many natural and anthropogenic sources and their concentrations vary widely between different environments. There is very little information on their concentrations in different types of urban environments, how they compare across these environments and their dominant sources. In this study, we measured airborne concentrations of small ions, particles and net particle charge at 32 different outdoor sites in and around a major city in Australia and identified the main ion sources. Sites were classified into seven groups as follows: park, woodland, city centre, residential, freeway, power lines and power substation. Generally, parks were situated away from ion sources and represented the urban background value of about 270 ions cm -3. Median concentrations at all other groups were significantly higher than in the parks. We show that motor vehicles and power transmission systems are two major ion sources in urban areas. Power lines and substations constituted strong unipolar sources, while motor vehicle exhaust constituted strong bipolar sources. The small ion concentration in urban residential areas was about 960 cm -3. At sites where ion sources were co-located with particle sources, ion concentrations were inhibited due to the ion-particle attachment process. These results improved our understanding on air ion distribution and its interaction with particles in the urban outdoor environment.

Seasonal Differences in the CO2 Exchange of a Short-Hydroperiod Florida Everglades Marsh

NASA Astrophysics Data System (ADS)

Schedlbauer, J. L.; Oberbauer, S. F.; Starr, G.; Jimenez, K. L.

2009-12-01

Although wetlands are among the world’s most productive ecosystems, little is known of long-term CO2 exchange in tropical and subtropical wetlands. As human pressure on wetlands increases and climate change proceeds, there is growing need to increase our knowledge of wetland ecosystem function. The Everglades is a highly managed wetlands complex occupying >6000 km2 in south Florida. This ecosystem is oligotrophic, but extremely high rates of productivity have been previously reported. To evaluate annual and seasonal (dry vs. wet season) ecosystem production, CO2 exchange was determined by eddy covariance in a short-hydroperiod marl marsh. Rates of net ecosystem exchange and ecosystem respiration were small year-round and declined in the wet season relative to the dry season. Inundation submerged approximately half of the marsh’s leaf area, substantially limiting gross ecosystem production. While light and air temperature exerted the primary controls on net ecosystem exchange and ecosystem respiration in the dry season, inundation weakened these relationships. The ecosystem shifted from a CO2 sink in the dry season to a CO2 source in the wet season; however, the marsh was a small carbon sink on an annual basis. Net ecosystem production, ecosystem respiration, and gross ecosystem production were -27.9, 394.3, and 422.2 g C m-2 year-1, respectively. Unexpectedly low CO2 flux rates and annual production distinguish the Everglades from many other wetlands. Nonetheless, impending changes in water management and climate are likely to alter the CO2 balance of this wetland and may increase the source strength of these extensive short-hydroperiod marshes.

Fishing with bed nets on Lake Tanganyika: a randomized survey.

PubMed

McLean, Kate A; Byanaku, Aisha; Kubikonse, Augustine; Tshowe, Vincent; Katensi, Said; Lehman, Amy G

2014-10-07

Malaria is among the most common causes of death along Lake Tanganyika, a problem which many aid organizations have attempted to combat through the distribution of free mosquito bed nets to high-risk communities. The Lake Tanganyika Floating Health Clinic (LTFHC), a health-based non-governmental organization (NGO), has observed residents of the Lake Tanganyika basin using bed nets to fish small fry near the shoreline, despite a series of laws that prohibit bed net use and other fine-gauge nets for fishing, implemented to protect the near-shore fish ecology. The LTFHC sought to quantify the sources of bed nets and whether they were being used for fishing. The LTFHC conducted a survey of seven lakeside villages in Lagosa Ward, Tanzania. The government has divided each village into two to six pre-existing geographic sub-villages depending on population size. Seven households per sub-village were chosen at random for survey administration. The survey consisted of 23 questions regarding mosquito bed net practices, including the use of bed nets for fishing, as well as questions pertaining to any perceived changes to the fish supply. A total of 196 surveys were administered over a four-week period with a 100% response rate. Over 87% of households surveyed have used a mosquito bed net for fishing at some point. The majority of respondents reported receiving their bed net for free (96.4%), observing "many" residents of their village using bed nets for fishing (97.4%), and noticing a subjective decrease in the fish supply over time (64.9%). The findings of this study raise concerns that the use of free malaria bed nets for fishing is widespread along Lake Tanganyika, and that this dynamic will have an adverse effect on fish ecology. Further studies are indicated to fully define the scope of bed net misuse and the effects of alternative vector control strategies in water-based communities.

Limits to the lunar atmosphere

NASA Astrophysics Data System (ADS)

Morgan, T. H.; Shemansky, D. E.

1991-02-01

Apollo UV spectrometer experiment set limits on the density of oxygen of less than 500/cu cm, and the Apollo Lunar Atmospheric Composition Experiment data imply a value less than 50/cu cm above the subsolar point. These limits are surprisingly small relative to the measured value for sodium. A simple consideration of sources and sinks predicts significantly greater densities of oxygen. It is possible but doubtful that the Apollo measurements occurred during an epoch in which source rates were small. A preferential loss process for oxygen on the darkside of the moon is considered in which ionization by electron capture in surface collisions leads to escape through acceleration in the local electric field. Cold trapping in permanently shadowed regions as a net sink is considered and discounted, but the episodic nature of cometary insertion may allow formation of ice layers which act as a stabilized source of OH. On the basis of an assumed meteoroid impact source, a possible emission brightness of 50 R in the OH(A - X)(0,0) band above the lunar bright limb is predicted.

Limits to the lunar atmosphere

NASA Technical Reports Server (NTRS)

Morgan, T. H.; Shemansky, D. E.

1991-01-01

Apollo UV spectrometer experiment set limits on the density of oxygen of less than 500/cu cm, and the Apollo Lunar Atmospheric Composition Experiment data imply a value less than 50/cu cm above the subsolar point. These limits are surprisingly small relative to the measured value for sodium. A simple consideration of sources and sinks predicts significantly greater densities of oxygen. It is possible but doubtful that the Apollo measurements occurred during an epoch in which source rates were small. A preferential loss process for oxygen on the darkside of the moon is considered in which ionization by electron capture in surface collisions leads to escape through acceleration in the local electric field. Cold trapping in permanently shadowed regions as a net sink is considered and discounted, but the episodic nature of cometary insertion may allow formation of ice layers which act as a stabilized source of OH. On the basis of an assumed meteoroid impact source, a possible emission brightness of 50 R in the OH(A - X)(0,0) band above the lunar bright limb is predicted.

Net global warming potential and greenhouse gas intensity

USDA-ARS?s Scientific Manuscript database

Various methods exist to calculate global warming potential (GWP) and greenhouse gas intensity (GHG) as measures of net greenhouse gas (GHG) emissions from agroecosystems. Little is, however, known about net GWP and GHGI that account for all sources and sinks of GHG emissions. Sources of GHG include...

Lateral velocity estimation bias due to beamforming delay errors (Conference Presentation)

NASA Astrophysics Data System (ADS)

Rodriguez-Molares, Alfonso; Fadnes, Solveig; Swillens, Abigail; Løvstakken, Lasse

2017-03-01

An artefact has recently been reported [1,2] in the estimation of the lateral blood velocity using speckle tracking. This artefact shows as a net velocity bias in presence of strong spatial velocity gradients such as those that occur at the edges of the filling jets in the heart. Even though this artifact has been found both in vitro and in simulated data, its causes are still undescribed. Here we demonstrate that a potential source of this artefact can be traced to smaller errors in the beamforming setup. By inserting a small offset in the beamforming delay, one can artificially create a net lateral movement in the speckle in areas of high velocity gradient. That offset does not have a strong impact in the image quality and can easily go undetected.

The MAL: A Malware Analysis Lexicon

DTIC Science & Technology

2013-02-01

we feel that further exploration of the open source literature is a promising avenue for enlarging the corpus. 2.3 Publishing the MAL Early in the...MAL. We feel that the advantages of this format are well worth the small incremental cost. The distribution of the MAL in this format is under...dictionary. We feel that moving to a richer format such as WordNet or WordVis would greatly improve the usability of the lexicon. 3.5 Improved Hosting The

26 CFR 1.904(g)-3T - Ordering rules for the allocation of net operating losses, net capital losses, U.S. source losses...

Code of Federal Regulations, 2011 CFR

2011-04-01

...(g)-3T Section 1.904(g)-3T Internal Revenue INTERNAL REVENUE SERVICE, DEPARTMENT OF THE TREASURY....904(g)-3T Ordering rules for the allocation of net operating losses, net capital losses, U.S. source... domestic losses. The rules must be applied in the order set forth in paragraphs (b) through (g) of this...

26 CFR 1.904(g)-3T - Ordering rules for the allocation of net operating losses, net capital losses, U.S. source losses...

Code of Federal Regulations, 2012 CFR

2012-04-01

...(g)-3T Section 1.904(g)-3T Internal Revenue INTERNAL REVENUE SERVICE, DEPARTMENT OF THE TREASURY....904(g)-3T Ordering rules for the allocation of net operating losses, net capital losses, U.S. source... domestic losses. The rules must be applied in the order set forth in paragraphs (b) through (g) of this...

Long-Term Natural Course of Small Nonfunctional Pancreatic Neuroendocrine Tumors in MEN1-Results From the Dutch MEN1 Study Group.

PubMed

Pieterman, Carolina R C; de Laat, Joanne M; Twisk, Jos W R; van Leeuwaarde, Rachel S; de Herder, Wouter W; Dreijerink, Koen M A; Hermus, Ad R M M; Dekkers, Olaf M; van der Horst-Schrivers, Anouk N A; Drent, Madeleine L; Bisschop, Peter H; Havekes, Bastiaan; Borel Rinkes, Inne H M; Vriens, Menno R; Valk, Gerlof D

2017-10-01

Pancreatic neuroendocrine tumors (pNETs) are highly prevalent in patients with multiple endocrine neoplasia type 1 (MEN1), and metastatic disease is an important cause of MEN1-related mortality. Especially small nonfunctional (NF) pNETs pose a challenge to the treating physician and more information is needed regarding their natural course. We assessed long-term natural history of small NF-pNETs and its modifiers in the Dutch MEN1 population. Retrospective longitudinal observational cohort study of patients with small (<2 cm) NF-pNETs from the Dutch national MEN1 database, which includes >90% of the Dutch MEN1 population. Modifiers of long-term natural course were analyzed using linear mixed-models analysis. Growth rate of the 115 included small NF-pNETs from 99 patients was slow (0.4 mm/y; 95% confidence interval, 0.15 to 0.59). Seventy percent of the tumors was stable and a subgroup of 30% of the tumors was growing (1.6 mm/y; 95% confidence interval, 1.1 to 2.0). No differences in clinical characteristics were identified between growing and stable tumors. Within the subgroup of growing tumors, germline missense mutations were significantly associated with accelerated growth compared with nonsense and frameshift mutations. The majority of small NF-pNETs are stable at long-term follow-up, irrespective of the underlying MEN1 genotype. A subgroup of tumors is slowly growing but cannot be identified on clinical grounds. In this subgroup, tumors with missense mutations exhibited faster growth. Additional events appear necessary for pNETs to progress. Future studies should be aimed at identifying these molecular driving events, which could be used as potential biomarkers. Copyright © 2017 Endocrine Society

Efficiency of baited hoop nets for sampling catfish in southeastern U.S. small impoundments

USGS Publications Warehouse

Wallace, Benjamin C.; Weaver, Daniel M.; Kwak, Thomas J.

2011-01-01

Many U.S. natural resource agencies stock catfish (Ictaluridae) into small impoundments to provide recreational fishing opportunities. However, effective standardized methods for sampling catfish in small impoundments have not been developed for wide application, particularly in the southeastern United States. We evaluated the efficiency of three bait treatments (i.e., soybean cake, sunflower cake, and no bait) of tandem hoop nets in two North Carolina small impoundments during the fall of 2008 and spring of 2009 in a factorial experimental design. The impoundments were stocked with catchable-size channel catfish Ictalurus punctatus at contrastingly low (5.5 fi sh/ha) and high (90.0 fi sh/ha) rates prior to our sampling. Nets baited with soybean cake consistently sampled more channel catfish than any other treatment. Channel catfish catch ranged as high as 3,251 fi sh per net series during the fall in nets baited with soybean cake in the intensively stocked impoundment and was up to 8.5 and 15.3 times higher during the fall than in the spring in each impoundment. Nets baited with soybean cake sampled significantly (12 and 24 times) more channel catfish than those with no bait in the two impoundments. These trends did not occur among other catfish species. Nonictalurid fish and turtle catch was higher during spring compared to that of fall, corresponding with low channel catfish catches. Our results indicate that tandem hoop nets baited with soybean cake during the fall is a more efficient method for sampling channel catfish compared to nets baited with sunflower cake or no bait in spring or fall. Our findings validate this technique for application in southeastern U.S. small impoundments to assess catfish abundance to guide management and evaluate the success of catfish stocking programs.

Seasonal relationships between precipitation, forest floor, and streamwater nitrogen, Isle Royale, Michigan

USGS Publications Warehouse

Stottlemyer, R.; Toczydlowski, D.

1999-01-01

The Upper Great Lakes receive large amounts of precipitation-NH4/+ and moderate NO3/- inputs. Increased atmospheric inorganic N input has led to concern about ecosystem capacity to utilize excess N. This paper summarizes a 5-yr study of seasonal N content and flux in precipitation, snowpack, forest floor, and streamwater in order to assess the source of inorganic N outputs in streamflow from a small boreal watershed. Average precipitation N input was 3 kg ha-1 yr-1. The peak snowpack N content averaged 0.55 kg ha-1. The forest floor inorganic N pool was ???2 kg ha-1, eight times larger than monthly precipitation N input. The inorganic N pool size peaked in spring and early summer. Ninety percent of the forest floor inorganic N pool was made up of NH4/+-N. Forest floor inorganic N pools generally increased with temperature. Net N mineralization was 15 kg ha-1 yr-1, and monthly rates peaked in early summer. During winter, the mean monthly net N mineralization rate was twice the peak snowpack N content. Streamwater NO3/- concentration peaked in winter, and inorganic N output peaked in late fall. Beneath the dominant boreal forest species, net N mineralization rates were positively correlated (P < 0.05) with streamwater NO3/- concentrations. Forest floor NO3/- pools beneath alder [Alnus rugosa (Du Roi) Spreng] were positively correlated (P < 0.01) to streamwater NO3/- output. At the watershed mouth, streamwater NO3/- concentrations were positively correlated (P < 0.05) with precipitation NO3/- input and precipitation amount. The relatively small snowpack N content and seasonal precipitation N input compared to forest floor inorganic N pools and net N mineralization rates, the strong ecosystem retention of precipitation N inputs, and the seasonal streamwater NO3/- concentration and output pattern all indicated that little streamwater NO3/- came directly from precipitation or snowmelt.The Upper Great Lakes receive large amounts of precipitation-NH4+ and moderate NO3- inputs. Increased atmospheric inorganic N input has led to concern about ecosystem capacity to utilize excess N. This paper summarizes a 5-yr study of seasonal N content and flux in precipitation, snowpack, forest floor, and streamwater in order to assess the source of inorganic N outputs in streamflow from a small boreal watershed. Average precipitation N input was 3 kg ha-1 yr-1. The peak snowpack N content averaged 0.55 kg ha-1. The forest floor inorganic N pool was ??? 2 kg ha-1, eight times larger than monthly precipitation N input. The inorganic N pool size peaked in spring and early summer. Ninety percent of the forest floor inorganic N pool was made up of NH4+-N. Forest floor inorganic N pools generally increased with temperature. Net N mineralization was 15 kg ha-1 yr-1, and monthly rates peaked in early summer. During winter, the mean monthly net N mineralization rate was twice the peak snowpack N content. Streamwater NO3- concentration peaked in winter, and inorganic N output peaked in late fall. Beneath the dominant boreal forest species, net N mineralization rates were positively correlated (P < 0.05) with streamwater NO3- concentrations. Forest floor NO3- pools beneath alder [Alnus rugosa (Du Roi) Spreng] were positively correlated (P<0.01) to streamwater NO3- output. At the watershed mouth, streamwater NO3- concentrations were positively correlated (P < 0.05) with precipitation NO3- input and precipitation amount. The relatively small snowpack N content and seasonal precipitation N input compared to forest floor inorganic N pools and net N mineralization rates, the strong ecosystem retention of precipitation N inputs, and the seasonal streamwater NO3- concentration and output pattern all indicated that little streamwater NO3- came directly from precipitation or snowmelt.

High-Throughput Classification of Radiographs Using Deep Convolutional Neural Networks.

PubMed

Rajkomar, Alvin; Lingam, Sneha; Taylor, Andrew G; Blum, Michael; Mongan, John

2017-02-01

The study aimed to determine if computer vision techniques rooted in deep learning can use a small set of radiographs to perform clinically relevant image classification with high fidelity. One thousand eight hundred eighty-five chest radiographs on 909 patients obtained between January 2013 and July 2015 at our institution were retrieved and anonymized. The source images were manually annotated as frontal or lateral and randomly divided into training, validation, and test sets. Training and validation sets were augmented to over 150,000 images using standard image manipulations. We then pre-trained a series of deep convolutional networks based on the open-source GoogLeNet with various transformations of the open-source ImageNet (non-radiology) images. These trained networks were then fine-tuned using the original and augmented radiology images. The model with highest validation accuracy was applied to our institutional test set and a publicly available set. Accuracy was assessed by using the Youden Index to set a binary cutoff for frontal or lateral classification. This retrospective study was IRB approved prior to initiation. A network pre-trained on 1.2 million greyscale ImageNet images and fine-tuned on augmented radiographs was chosen. The binary classification method correctly classified 100 % (95 % CI 99.73-100 %) of both our test set and the publicly available images. Classification was rapid, at 38 images per second. A deep convolutional neural network created using non-radiological images, and an augmented set of radiographs is effective in highly accurate classification of chest radiograph view type and is a feasible, rapid method for high-throughput annotation.

Cyclic variations in nitrogen uptake rate of soybean plants: ammonium as a nitrogen source

NASA Technical Reports Server (NTRS)

Henry, L. T.; Raper, C. D. Jr

1989-01-01

When NO3- is the sole nitrogen source in flowing solution culture, the net rate of nitrogen uptake by nonnodulated soybean (Glycine max L. Merr. cv Ransom) plants cycles between maxima and minima with a periodicity of oscillation that corresponds with the interval of leaf emergence. Since soybean plants accumulate similar quantities of nitrogen when either NH4+ or NO3- is the sole source in solution culture controlled at pH 6.0, an experiment was conducted to determine if the oscillations in net rate of nitrogen uptake also occur when NH4+ is the nitrogen source. During a 21-day period of vegetative development, net uptake of NH4+ was measured daily by ion chromatography as depletion of NH4+ from a replenished nutrient solution containing 1.0 millimolar NH4+. The net rate of NH4+ uptake oscillated with a periodicity that was similar to the interval of leaf emergence. Instances of negative net rates of uptake indicate that the transition between maxima and minima involved changes in influx and efflux components of net NH4+ uptake.

Ultra-high sensitivity moment magnetometry of geological samples using magnetic microscopy

NASA Astrophysics Data System (ADS)

Lima, Eduardo A.; Weiss, Benjamin P.

2016-09-01

Useful paleomagnetic information is expected to be recorded by samples with moments up to three orders of magnitude below the detection limit of standard superconducting rock magnetometers. Such samples are now detectable using recently developed magnetic microscopes, which map the magnetic fields above room-temperature samples with unprecedented spatial resolutions and field sensitivities. However, realizing this potential requires the development of techniques for retrieving sample moments from magnetic microscopy data. With this goal, we developed a technique for uniquely obtaining the net magnetic moment of geological samples from magnetic microscopy maps of unresolved or nearly unresolved magnetization. This technique is particularly powerful for analyzing small, weakly magnetized samples such as meteoritic chondrules and terrestrial silicate crystals like zircons. We validated this technique by applying it to field maps generated from synthetic sources and also to field maps measured using a superconducting quantum interference device (SQUID) microscope above geological samples with moments down to 10-15 Am2. For the most magnetic rock samples, the net moments estimated from the SQUID microscope data are within error of independent moment measurements acquired using lower sensitivity standard rock magnetometers. In addition to its superior moment sensitivity, SQUID microscope net moment magnetometry also enables the identification and isolation of magnetic contamination and background sources, which is critical for improving accuracy in paleomagnetic studies of weakly magnetic samples.

Lu-Hf and Sm-Nd evolution in lunar mare basalts

DOE Office of Scientific and Technical Information (OSTI.GOV)

Unruh, D.M.; Stille, P.; Patchett, P.J.

1984-02-15

Lu-Hf and Sm-Nd data for mare basalts combined with Rb-Sr and total REE data taken from the literature suggest that the mare basalts were derived by small (< or =10%) degrees of partial melting of cumulate sources, but that the magma ocean from which these sources formed was light REE and Hf-enriched. Calculated source compositions range fromm lherzolite to olivine websterite. Nonmodal melting of small amounts of ilmenite (< or =3%) in the sources seems to be required by the Lu/Hf data. A comparison of the Hf and Nd isotopic characteristics between the mare basalts and terrestrial oceanic basalts revealsmore » that the epsilonHf/epsilonNd ratios of low-Ti mare basalts are much higher than in terrestrial oceanic basalts. The results are qualitatively consistent with the hypothesis that terrestrial basalt sources are partial melt residues whereas mare basalt sources are cumulates. Alternatively, the results may imply that the terrestrial mantle has evolved in two (or more) stages of evolution, and that the net effect was depletion of the mantle during the first approx.1-3 b.y. followed by enrichment during the last 1-2 b.y.; or simply that there is a difference in Lu-Hf crystal-liquid partitioning (relative to Sm-Nd) between the lunar and terrestrial mantles.« less

BioNetFit: a fitting tool compatible with BioNetGen, NFsim and distributed computing environments

PubMed Central

Thomas, Brandon R.; Chylek, Lily A.; Colvin, Joshua; Sirimulla, Suman; Clayton, Andrew H.A.; Hlavacek, William S.; Posner, Richard G.

2016-01-01

Summary: Rule-based models are analyzed with specialized simulators, such as those provided by the BioNetGen and NFsim open-source software packages. Here, we present BioNetFit, a general-purpose fitting tool that is compatible with BioNetGen and NFsim. BioNetFit is designed to take advantage of distributed computing resources. This feature facilitates fitting (i.e. optimization of parameter values for consistency with data) when simulations are computationally expensive. Availability and implementation: BioNetFit can be used on stand-alone Mac, Windows/Cygwin, and Linux platforms and on Linux-based clusters running SLURM, Torque/PBS, or SGE. The BioNetFit source code (Perl) is freely available (http://bionetfit.nau.edu). Supplementary information: Supplementary data are available at Bioinformatics online. Contact: bionetgen.help@gmail.com PMID:26556387

The near extinction of lake trout in Lake Michigan

USGS Publications Warehouse

Eschmeyer, Paul H.

1957-01-01

Comparisons in 1949 and 1950 of numbers of legal-sized lake trout caught in large-mesh nets with numbers of small fish taken in chub nets showed that both large and small lake trout declined over the same period, and that by these years the decline may have been greater among small than among legal-sized fish.

26 CFR 1.904(f)-2 - Recapture of overall foreign losses.

Code of Federal Regulations, 2011 CFR

2011-04-01

... certain foreign source gain as United States source gain; and (ii) Section 904(b)(2) and the regulations... capital gains and losses. (c) Section 904(f)(1) recapture—(1) [Reserved] For further guidance, see § 1.904... limitation as follows: Foreign source taxable income other than net capital gain $720 Foreign source net...

26 CFR 1.904(f)-2 - Recapture of overall foreign losses.

Code of Federal Regulations, 2013 CFR

2013-04-01

... certain foreign source gain as United States source gain; and (ii) Section 904(b)(2) and the regulations... capital gains and losses. (c) Section 904(f)(1) recapture—(1)In general. In a taxable year in which a... limitation as follows: Foreign source taxable income other than net capital gain $720 Foreign source net...

26 CFR 1.904(f)-2 - Recapture of overall foreign losses.

Code of Federal Regulations, 2012 CFR

2012-04-01

... certain foreign source gain as United States source gain; and (ii) Section 904(b)(2) and the regulations... capital gains and losses. (c) Section 904(f)(1) recapture—(1) [Reserved] For further guidance, see § 1.904... limitation as follows: Foreign source taxable income other than net capital gain $720 Foreign source net...

26 CFR 1.904(f)-2 - Recapture of overall foreign losses.

Code of Federal Regulations, 2014 CFR

2014-04-01

... certain foreign source gain as United States source gain; and (ii) Section 904(b)(2) and the regulations... capital gains and losses. (c) Section 904(f)(1) recapture—(1)In general. In a taxable year in which a... limitation as follows: Foreign source taxable income other than net capital gain $720 Foreign source net...

Atmospheric exchange of carbon dioxide and methane of a small water body and a floating mat in the Luther Marsh peatland, Ontario, Canada

NASA Astrophysics Data System (ADS)

Burger, Magdalena; Berger, Sina; Blodau, Christian

2015-04-01

Recent investigations have suggested that small water bodies cover larger areas in northern peatlands than previously assumed. Their role in the carbon cycle and gas exchange rates are poorly constrained so far. To address this issue we measured CO2 and CH4 fluxes on a small water body (ca. 700 m2) and the surrounding floating mat in the Luther Marsh peatland in Ontario, Canada from July to September 2014. To this end we used closed chambers combined with a portable Los Gatos high-resolution trace gas analyzer at different water depths and distances from the shore on the pond and with different dominating plant types on the floating mat surrounding the pond. In addition, CO2 concentrations were recorded in high temporal resolution using an infrared sensor system during selected periods. Air and water temperature, humidity and temperature of the floating mat, wind speed and direction, photosynthetically active radiation, air pressure and relative humidity were also recorded as auxiliary data at the study site. The results show that pond and floating mat were sources of methane throughout the whole measuring period. Methane emissions via the ebullition pathway occurred predominantly near the shore and on the floating mat. During the daytime measurements the floating mat acted as a net sink and the pond as a net source of CO2. The dynamics of CO2 exchange was also strongly time dependent, as CO2 emissions from the pond strongly increased after mid-August. This suggests that photosynthesis was more affected by seasonal decline than respiration process in the pond and that the allochthonous component of the CO2 flux increased in relative importance towards fall.

NutrientNet: An Internet-Based Approach to Teaching Market-Based Policy for Environmental Management

ERIC Educational Resources Information Center

Nguyen, To N.; Woodward, Richard T.

2009-01-01

NutrientNet is an Internet-based environment in which a class can simulate a market-based approach for improving water quality. In NutrientNet, each student receives a role as either a point source or a nonpoint source polluter, and then the participants are allowed to trade water quality credits to cost-effectively reduce pollution in a…

BioNetFit: a fitting tool compatible with BioNetGen, NFsim and distributed computing environments.

PubMed

Thomas, Brandon R; Chylek, Lily A; Colvin, Joshua; Sirimulla, Suman; Clayton, Andrew H A; Hlavacek, William S; Posner, Richard G

2016-03-01

Rule-based models are analyzed with specialized simulators, such as those provided by the BioNetGen and NFsim open-source software packages. Here, we present BioNetFit, a general-purpose fitting tool that is compatible with BioNetGen and NFsim. BioNetFit is designed to take advantage of distributed computing resources. This feature facilitates fitting (i.e. optimization of parameter values for consistency with data) when simulations are computationally expensive. BioNetFit can be used on stand-alone Mac, Windows/Cygwin, and Linux platforms and on Linux-based clusters running SLURM, Torque/PBS, or SGE. The BioNetFit source code (Perl) is freely available (http://bionetfit.nau.edu). Supplementary data are available at Bioinformatics online. bionetgen.help@gmail.com. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

An incentive-based source separation model for sustainable municipal solid waste management in China.

PubMed

Xu, Wanying; Zhou, Chuanbin; Lan, Yajun; Jin, Jiasheng; Cao, Aixin

2015-05-01

Municipal solid waste (MSW) management (MSWM) is most important and challenging in large urban communities. Sound community-based waste management systems normally include waste reduction and material recycling elements, often entailing the separation of recyclable materials by the residents. To increase the efficiency of source separation and recycling, an incentive-based source separation model was designed and this model was tested in 76 households in Guiyang, a city of almost three million people in southwest China. This model embraced the concepts of rewarding households for sorting organic waste, government funds for waste reduction, and introducing small recycling enterprises for promoting source separation. Results show that after one year of operation, the waste reduction rate was 87.3%, and the comprehensive net benefit under the incentive-based source separation model increased by 18.3 CNY tonne(-1) (2.4 Euros tonne(-1)), compared to that under the normal model. The stakeholder analysis (SA) shows that the centralized MSW disposal enterprises had minimum interest and may oppose the start-up of a new recycling system, while small recycling enterprises had a primary interest in promoting the incentive-based source separation model, but they had the least ability to make any change to the current recycling system. The strategies for promoting this incentive-based source separation model are also discussed in this study. © The Author(s) 2015.

Video studies of passage by Anopheles gambiae mosquitoes through holes in a simulated bed net: effects of hole size, hole orientation and net environment.

PubMed

Sutcliffe, James; Colborn, Kathryn L

2015-05-13

Holes in netting provide potential routes for mosquitoes to enter ITNs. Despite this, there is little information on how mosquitoes respond to holes in bed nets and how their responses are affected by hole size, shape and orientation or by ambient conditions around the net. Female Anopheles gambiae (G3) were recorded in a simulated bed net consisting of two sizes of untreated netting-covered behavioural arenas placed above and beside (to simulate the bed net roof and sides respectively) the experimenter who was a source of host cues from 'inside' the net. A round hole of 9 mm or 13 mm diameter was cut into the centre of the netting of each arena. Videos of unfed female mosquitoes in arenas were analysed for time spent flying, walking and standing still and for exit through the hole. The effects of the experimenter on temperature and relative humidity around the simulated net were also measured. Mosquitoes were significantly more active in overhead arenas than in arenas to the side. Hole passage was significantly more likely in smaller arenas than larger ones and for larger holes than smaller ones. In arenas to the side, hole passage rate through small holes was about 50% less likely than what could be explained by area alone. Passage rate through holes in overhead arenas was consistent with hole area. Temperature in arenas did not strongly reflect the experimenter's presence in the simulated net. Relative humidity and absolute humidity in overhead arenas, but not in arenas to the side, were immediately affected by experimenter presence. Higher levels of activity in overhead arenas than in arenas to the side were likely due to the rising heat and humidity plume from the experimenter. Lower than expected passage rates through smaller vertically oriented holes may have been be due to an edge effect that does not apply to horizontally oriented holes. Results suggest that current methods of assessing the importance of physical damage to ITNs may not accurately reflect mosquito entry risk in all cases.

In-Situ Quantification of Microbial Processes Controlling Methane Emissions From Rice Plants

NASA Astrophysics Data System (ADS)

Schroth, M. H.; Cho, R.; Zeyer, J. A.

2011-12-01

Methane is an important greenhouse gas contributing to global warming. Among other sources, rice (paddy) soils represent a major nonpoint source of biogenic methane. In flooded paddy soils methane is produced under anaerobic conditions. Conversely, methanotrophic microorganisms oxidize methane to carbon dioxide in the root zone of rice plants, thus reducing overall methane emissions to the atmosphere. We present a novel combination of methods to quantify methanogenesis and methane oxidation in paddy soils and to link methane turnover to net emissions of rice plants. To quantify methane turnover in the presence of high methane background concentrations, small-scale push-pull tests (PPTs) were conducted in paddy soils using stable isotope-labeled substrates. Deuterated acetate and 13-C bicarbonate were employed to discern and quantify acetoclastic and hydrogenotrophic methanogenesis, while 13-C methane was employed to quantify methane oxidation. During 2.5 hr-long PPTs, 140 mL of a test solution containing labeled substrates and nonreactive tracers (Ar, Br-) was injected into paddy soils of potted rice plants. After a short rest period, 480 mL of test solution/pore water mixture was extracted from the same location. Methane turnover was then computed from extraction-phase breakthrough curves of substrates and/or products, and nonreactive tracers. To link methane turnover to net emissions, methane emissions from paddy soils and rice plants were individually determined immediately preceding PPTs using static flux chambers. We will present results of a series of experiments conducted in four different potted rice plants. Preliminary results indicate substantial variability in methane turnover and net emission between different rice plants. The employed combination of methods appears to provide a robust means to quantitatively link methane turnover in paddy soils to net emissions from rice plants.

Historical and future perspectives of global soil carbon response to climate and land-use changes

NASA Astrophysics Data System (ADS)

Eglin, T.; Ciais, P.; Piao, S. L.; Barre, P.; Bellassen, V.; Cadule, P.; Chenu, C.; Gasser, T.; Koven, C.; Reichstein, M.; Smith, P.

2010-11-01

ABSTRACT In this paper, we attempt to analyse the respective influences of land-use and climate changes on the global and regional balances of soil organic carbon (SOC) stocks. Two time periods are analysed: the historical period 1901-2000 and the period 2000-2100. The historical period is analysed using a synthesis of published data as well as new global and regional model simulations, and the future is analysed using models only. Historical land cover changes have resulted globally in SOC release into the atmosphere. This human induced SOC decrease was nearly balanced by the net SOC increase due to higher CO2 and rainfall. Mechanization of agriculture after the 1950s has accelerated SOC losses in croplands, whereas development of carbon-sequestering practices over the past decades may have limited SOC loss from arable soils. In some regions (Europe, China and USA), croplands are currently estimated to be either a small C sink or a small source, but not a large source of CO2 to the atmosphere. In the future, according to terrestrial biosphere and climate models projections, both climate and land cover changes might cause a net SOC loss, particularly in tropical regions. The timing, magnitude, and regional distribution of future SOC changes are all highly uncertain. Reducing this uncertainty requires improving future anthropogenic CO2 emissions and land-use scenarios and better understanding of biogeochemical processes that control SOC turnover, for both managed and un-managed ecosystems.

Effects of dietary caffeine on mood when rested and sleep restricted.

PubMed

James, Jack E; Gregg, M Elizabeth

2004-07-01

Prolonged use of caffeine can lead to physical dependence evidenced by characteristic withdrawal symptoms during abstinence. Debate exists as to whether mood enhancement by caffeine represents a net effect or merely the restoration of abstinence-induced mood decrements. One aim of this study was to determine the net effects on mood of dietary caffeine compared with prolonged abstinence. In addition, the study aimed to determine whether caffeine restores mood degraded by a non-caffeine source, namely, sleep restriction. A double-blind placebo-controlled cross-over design was employed in which 48 male and female volunteers alternated weekly between ingesting placebo and caffeine (1.75 mg/kg) three times daily for 4 consecutive weeks, while being either rested or sleep restricted. Mood was assessed using a computerized version of the profile of mood states (POMS), giving scores for overall mood and six mood dimensions. Gender had small effects on mood, whereas all mood dimensions were markedly adversely affected by sleep restriction. Caffeine had no significant net enhancing effects on mood when participants were rested, and produced no net restorative effects when mood was degraded by sleep restriction. On the contrary, caffeine-induced decrements in mood were observed during both conditions of rest and sleep restriction. Copyright 2004 John Wiley & Sons, Ltd.

Is endoscopic ultrasonography essential for endoscopic resection of small rectal neuroendocrine tumors?

PubMed Central

Park, Su Bum; Kim, Dong Jun; Kim, Hyung Wook; Choi, Cheol Woong; Kang, Dae Hwan; Kim, Su Jin; Nam, Hyeong Seok

2017-01-01

AIM To evaluate the importance of endoscopic ultrasonography (EUS) for small (≤ 10 mm) rectal neuroendocrine tumor (NET) treatment. METHODS Patients in whom rectal NETs were diagnosed by endoscopic resection (ER) at the Pusan National University Yangsan Hospital between 2008 and 2014 were included in this study. A total of 120 small rectal NETs in 118 patients were included in this study. Histologic features and clinical outcomes were analyzed, and the findings of endoscopy, EUS and histology were compared. RESULTS The size measured by endoscopy was not significantly different from that measured by EUS and histology (r = 0.914 and r = 0.727 respectively). Accuracy for the depth of invasion was 92.5% with EUS. No patients showed invasion of the muscularis propria or metastasis to the regional lymph nodes. All rectal NETs were classified as grade 1 and demonstrated an L-cell phenotype. Mean follow-up duration was 407.54 ± 374.16 d. No patients had local or distant metastasis during the follow-up periods. CONCLUSION EUS is not essential for ER in the patient with small rectal NETs because of the prominent morphology and benign behavior. PMID:28373770

Tropical forests are a net carbon source based on aboveground measurements of gain and loss

NASA Astrophysics Data System (ADS)

Baccini, A.; Walker, W.; Carvalho, L.; Farina, M.; Sulla-Menashe, D.; Houghton, R. A.

2017-10-01

The carbon balance of tropical ecosystems remains uncertain, with top-down atmospheric studies suggesting an overall sink and bottom-up ecological approaches indicating a modest net source. Here we use 12 years (2003 to 2014) of MODIS pantropical satellite data to quantify net annual changes in the aboveground carbon density of tropical woody live vegetation, providing direct, measurement-based evidence that the world’s tropical forests are a net carbon source of 425.2 ± 92.0 teragrams of carbon per year (Tg C year-1). This net release of carbon consists of losses of 861.7 ± 80.2 Tg C year-1 and gains of 436.5 ± 31.0 Tg C year-1. Gains result from forest growth; losses result from deforestation and from reductions in carbon density within standing forests (degradation or disturbance), with the latter accounting for 68.9% of overall losses.

Water level, vegetation composition, and plant productivity explain greenhouse gas fluxes in temperate cutover fens after inundation

NASA Astrophysics Data System (ADS)

Minke, Merten; Augustin, Jürgen; Burlo, Andrei; Yarmashuk, Tatsiana; Chuvashova, Hanna; Thiele, Annett; Freibauer, Annette; Tikhonov, Vitalij; Hoffmann, Mathias

2016-07-01

Peat extraction leaves a land surface with a strong relief of deep cutover areas and higher ridges. Rewetting inundates the deep parts, while less deeply extracted zones remain at or above the water level. In temperate fens the flooded areas are colonized by helophytes such as Eriophorum angustifolium, Carex spp., Typha latifolia or Phragmites australis dependent on water depth. Reeds of Typha and Phragmites are reported as large sources of methane, but data on net CO2 uptake are contradictory for Typha and rare for Phragmites. Here, we analyze the effect of vegetation, water level and nutrient conditions on greenhouse gas (GHG) emissions for representative vegetation types along water level gradients at two rewetted cutover fens (mesotrophic and eutrophic) in Belarus. Greenhouse gas emissions were measured campaign-wise with manual chambers every 2 to 4 weeks for 2 years and interpolated by modelling. All sites had negligible nitrous oxide exchange rates. Most sites were carbon sinks and small GHG sources. Methane emissions generally increased with net ecosystem CO2 uptake. Mesotrophic small sedge reeds with water table around the land surface were small GHG sources in the range of 2.3 to 4.2 t CO2 eq. ha-1 yr-1. Eutrophic tall sedge - Typha latifolia reeds on newly formed floating mats were substantial net GHG emitters in the range of 25.1 to 39.1 t CO2 eq. ha-1 yr. They represent transient vegetation stages. Phragmites reeds ranged between -1.7 to 4.2 t CO2 eq. ha-1 yr-1 with an overall mean GHG emission of 1.3 t CO2 eq. ha-1 yr-1. The annual CO2 balance was best explained by vegetation biomass, which includes the role of vegetation composition and species. Methane emissions were obviously driven by biological activity of vegetation and soil organisms. Shallow flooding of cutover temperate fens is a suitable measure to arrive at low GHG emissions. Phragmites australis establishment should be promoted in deeper flooded areas and will lead to moderate, but variable GHG emissions or even occasional sinks. The risk of large GHG emissions is higher for eutrophic than mesotrophic peatlands. Nevertheless, flooding of eutrophic temperate fens still represents a safe GHG mitigation option because even the hotspot of our study, the floating tall sedge - Typha latifolia reeds, did not exceed the typical range of GHG emissions from drained fen grasslands and the spatially dominant Phragmites australis reed emitted by far less GHG than drained fens.

An exploratory qualitative study on perceptions about mosquito bed nets in the Niger Delta: what are the barriers to sustained use?

PubMed Central

Galvin, Kathleen T; Petford, Nick; Ajose, Frances; Davies, Dai

2011-01-01

Background: The effectiveness of malaria control programs is determined by an array of complex factors, including the acceptability and sustained use of preventative measures such as the bed net. A small-scale exploratory study was conducted in several locations in the Niger Delta region, Nigeria, to discover barriers against the use of bed nets, in the context of a current drive to scale up net use in Nigeria. Methods: A qualitative approach with a convenience sample was used. One to one interviews with mostly male adult volunteers were undertaken which explored typical living and sleeping arrangements, and perceptions about and barriers against the use of the mosquito prevention bed net. Results: Several key issues emerged from the qualitative data. Bed nets were not reported as widely used in this small sample. The reasons reported for lack of use included issues of convenience, especially net set up and dismantling; potential hazard and safety concerns; issues related to typical family composition and nature of accommodation; humid weather conditions; and perceptions of cost and effectiveness. Most barriers to net use concerned issues about everyday practical living and sleeping arrangements and perceptions about comfort. Interviewees identified were aware of malaria infection risks, but several also indicated certain beliefs that were barriers to net use. Conclusions: Successful control of malaria and scale up of insecticide-treated net coverage relies on community perceptions and practice. This small study has illuminated a number of important everyday life issues, which remain barriers to sustained net use, and has clarified further questions to be considered in net design and in future research studies. The study highlights the need for further research on the human concerns that contribute to sustained use of nets or, conversely, present significant barriers to their use. PMID:21544249

Net ozone photochemical production over the eastern and central North Pacific as inferred from GTE/CITE 1 observations during fall 1983

NASA Technical Reports Server (NTRS)

Chameides, W. L.; Davis, D. D.; Rodgers, M. O.; Bradshaw, J.; Sandholm, S.; Sachse, G.; Hill, G.; Gregory, G.

1987-01-01

The role of photochemistry in the budget of tropospheric ozone is studied. Measurements of O3, NO, CO, H2O vapor, and temperature obtained during the fall of 1983 during the GTE/CITE project over the eastern and central North Pacific Ocean are analyzed. The effect of altitude on the measurements is discussed. The analysis reveals a correlation between ozone and NO levels; both increase in concentration and variability with altitude. It is observed that an additional source of secondary importance associated wih CO-rich air parcels exists. A photochemical model is utilized to calculate the net rate of ozone production by photochemical reactions. A net photochemical source of ozone in the free troposphere and a net sink in the boundary layer are detected. The relation between the ozone source in the free troposphere and NO is examined. It is estimated that photochemistry provides a net ozone source to the free troposphere overlying the eastern and central North Pacific Ocean of about 5 x 10 to the 10th molecules/sq cm sec and a net sink of ozone to the boundary layer overlying this region of about 3 x 10 to the 10th molecules/sq cm sec.

Greenhouse gas emissions from alternative futures of deforestation and agricultural management in the southern Amazon.

PubMed

Galford, Gillian L; Melillo, Jerry M; Kicklighter, David W; Cronin, Timothy W; Cerri, Carlos E P; Mustard, John F; Cerri, Carlos C

2010-11-16

The Brazilian Amazon is one of the most rapidly developing agricultural areas in the world and represents a potentially large future source of greenhouse gases from land clearing and subsequent agricultural management. In an integrated approach, we estimate the greenhouse gas dynamics of natural ecosystems and agricultural ecosystems after clearing in the context of a future climate. We examine scenarios of deforestation and postclearing land use to estimate the future (2006-2050) impacts on carbon dioxide (CO(2)), methane (CH(4)), and nitrous oxide (N(2)O) emissions from the agricultural frontier state of Mato Grosso, using a process-based biogeochemistry model, the Terrestrial Ecosystems Model (TEM). We estimate a net emission of greenhouse gases from Mato Grosso, ranging from 2.8 to 15.9 Pg CO(2)-equivalents (CO(2)-e) from 2006 to 2050. Deforestation is the largest source of greenhouse gas emissions over this period, but land uses following clearing account for a substantial portion (24-49%) of the net greenhouse gas budget. Due to land-cover and land-use change, there is a small foregone carbon sequestration of 0.2-0.4 Pg CO(2)-e by natural forests and cerrado between 2006 and 2050. Both deforestation and future land-use management play important roles in the net greenhouse gas emissions of this frontier, suggesting that both should be considered in emissions policies. We find that avoided deforestation remains the best strategy for minimizing future greenhouse gas emissions from Mato Grosso.

Long-lasting insecticidal net source, ownership and use in the context of universal coverage: a household survey in eastern Rwanda.

PubMed

Kateera, Fredrick; Ingabire, Chantal M; Hakizimana, Emmanuel; Rulisa, Alexis; Karinda, Parfait; Grobusch, Martin P; Mutesa, Leon; van Vugt, Michèle; Mens, Petra F

2015-10-06

Universal long-lasting insecticidal net (LLIN) coverage (ULC) has reduced malaria morbidity and mortality across Africa. Although information is available on bed net use in specific groups, such as pregnant women and children under 5 years, there is paucity of data on their use among the general population. Bed net source, ownership and determinants of use among individuals from households in an eastern Rwanda community 8 months after a ULC were characterized. Using household-based, interviewer-administered questionnaires and interviewer-direct observations, data on bed net source, ownership and key determinants of net use, including demographics, socio-economic status indicators, house structure characteristics, as well as of bed net quantity, type and integrity, were collected from 1400 randomly selected households. Univariate and mixed effects logistic regression modelling was done to assess for determinants of bed net use. A total of 1410 households and 6598 individuals were included in the study. Overall, the proportion of households with at least one net was 92 % while bed net usage was reported among 72 % of household members. Of the households surveyed, a total ownership of 2768 nets was reported, of which about 96 % were reportedly LLINs received from the ULC. By interviewer-physical observation, 88 % of the nets owned were of the LLIN type with the remaining 12 % did not carry any mark to enable type recognition. The odds of bed net use were significantly lower among males and individuals: from households of low socio-economic status, from households with

Reconciling estimates of the contemporary North American carbon balance among terrestrial biosphere models, atmospheric inversions, and a new approach for estimating net ecosystem exchange from inventory-based data

USGS Publications Warehouse

Hayes, Daniel J.; Turner, David P.; Stinson, Graham; McGuire, A. David; Wei, Yaxing; West, Tristram O.; Heath, Linda S.; de Jong, Bernardus; McConkey, Brian G.; Birdsey, Richard A.; Kurz, Werner A.; Jacobson, Andrew R.; Huntzinger, Deborah N.; Pan, Yude; Post, W. Mac; Cook, Robert B.

2012-01-01

We develop an approach for estimating net ecosystem exchange (NEE) using inventory-based information over North America (NA) for a recent 7-year period (ca. 2000–2006). The approach notably retains information on the spatial distribution of NEE, or the vertical exchange between land and atmosphere of all non-fossil fuel sources and sinks of CO2, while accounting for lateral transfers of forest and crop products as well as their eventual emissions. The total NEE estimate of a -327 ± 252 TgC yr-1 sink for NA was driven primarily by CO2 uptake in the Forest Lands sector (-248 TgC yr-1), largely in the Northwest and Southeast regions of the US, and in the Crop Lands sector (-297 TgC yr-1), predominantly in the Midwest US states. These sinks are counteracted by the carbon source estimated for the Other Lands sector (+218 TgC yr-1), where much of the forest and crop products are assumed to be returned to the atmosphere (through livestock and human consumption). The ecosystems of Mexico are estimated to be a small net source (+18 TgC yr-1) due to land use change between 1993 and 2002. We compare these inventory-based estimates with results from a suite of terrestrial biosphere and atmospheric inversion models, where the mean continental-scale NEE estimate for each ensemble is -511 TgC yr-1 and -931 TgC yr-1, respectively. In the modeling approaches, all sectors, including Other Lands, were generally estimated to be a carbon sink, driven in part by assumed CO2 fertilization and/or lack of consideration of carbon sources from disturbances and product emissions. Additional fluxes not measured by the inventories, although highly uncertain, could add an additional -239 TgC yr-1 to the inventory-based NA sink estimate, thus suggesting some convergence with the modeling approaches.

Eddy covariance flux measurements of net ecosystem carbon dioxide exchange from a lowland peatland flux tower network in England and Wales

NASA Astrophysics Data System (ADS)

Morrison, Ross; Balzter, Heiko; Burden, Annette; Callaghan, Nathan; Cumming, Alenander; Dixon, Simon; Evans, Jonathan; Kaduk, Joerg; Page, Susan; Pan, Gong; Rayment, Mark; Ridley, Luke; Rylett, Daniel; Worrall, Fred; Evans, Christopher

2016-04-01

Peatlands store disproportionately large amounts of soil carbon relative to other terrestrial ecosystems. Over recent decades, the large amount of carbon stored as peat has proved vulnerable to a range of land use pressures as well as the increasing impacts of climate change. In temperate Europe and elsewhere, large tracts of lowland peatland have been drained and converted to agricultural land use. Such changes have resulted in widespread losses of lowland peatland habitat, land subsidence across extensive areas and the transfer of historically accumulated soil carbon to the atmosphere as carbon dioxide (CO2). More recently, there has been growth in activities aiming to reduce these impacts through improved land management and peatland restoration. Despite a long history of productive land use and management, the magnitude and controls on greenhouse gas emissions from lowland peatland environments remain poorly quantified. Here, results of surface-atmosphere measurements of net ecosystem CO2 exchange (NEE) from a network of seven eddy covariance (EC) flux towers located at a range of lowland peatland ecosystems across the United Kingdom (UK) are presented. This spatially-dense peatland flux tower network forms part of a wider observation programme aiming to quantify carbon, water and greenhouse gas balances for lowland peatlands across the UK. EC measurements totalling over seventeen site years were obtained at sites exhibiting large differences in vegetation cover, hydrological functioning and land management. The sites in the network show remarkable spatial and temporal variability in NEE. Across sites, annual NEE ranged from a net sink of -194 ±38 g CO2-C m-2 yr-1 to a net source of 784±70 g CO2-C m-2 yr-1. The results suggest that semi-natural sites remain net sinks for atmospheric CO2. Sites that are drained for intensive agricultural production range from a small net sink to the largest observed source for atmospheric CO2 within the flux tower network. Extensively managed grassland and a site that was restored from intensive arable land use represent modest CO2 sources. Temporal variations in CO2 fluxes at sites with permanent vegetation cover are coupled to seasonal and interannual variations in weather conditions and phenology. The type of crop produced and agricultural management drive large temporal differences in the CO2 fluxes of croplands on drained lowland peat soils. The main environmental controls on the spatial and temporal variations in CO2 exchange processes will be discussed.

LSDCat: Detection and cataloguing of emission-line sources in integral-field spectroscopy datacubes

NASA Astrophysics Data System (ADS)

Herenz, Edmund Christian; Wisotzki, Lutz

2017-06-01

We present a robust, efficient, and user-friendly algorithm for detecting faint emission-line sources in large integral-field spectroscopic datacubes together with the public release of the software package Line Source Detection and Cataloguing (LSDCat). LSDCat uses a three-dimensional matched filter approach, combined with thresholding in signal-to-noise, to build a catalogue of individual line detections. In a second pass, the detected lines are grouped into distinct objects, and positions, spatial extents, and fluxes of the detected lines are determined. LSDCat requires only a small number of input parameters, and we provide guidelines for choosing appropriate values. The software is coded in Python and capable of processing very large datacubes in a short time. We verify the implementation with a source insertion and recovery experiment utilising a real datacube taken with the MUSE instrument at the ESO Very Large Telescope. The LSDCat software is available for download at http://muse-vlt.eu/science/tools and via the Astrophysics Source Code Library at http://ascl.net/1612.002

SAFEGUARD: An Assured Safety Net Technology for UAS

NASA Technical Reports Server (NTRS)

Dill, Evan T.; Young, Steven D.; Hayhurst, Kelly J.

2016-01-01

As demands increase to use unmanned aircraft systems (UAS) for a broad spectrum of commercial applications, regulatory authorities are examining how to safely integrate them without loss of safety or major disruption to existing airspace operations. This work addresses the development of the Safeguard system as an assured safety net technology for UAS. The Safeguard system monitors and enforces conformance to a set of rules defined prior to flight (e.g., geospatial stay-out or stay-in regions, speed limits, altitude limits). Safeguard operates independently of the UAS autopilot and is strategically designed in a way that can be realized by a small set of verifiable functions to simplify compliance with regulatory standards for commercial aircraft. A framework is described that decouples the system from any other devices on the UAS as well as introduces complementary positioning source(s) for applications that require integrity and availability beyond what the Global Positioning System (GPS) can provide. Additionally, the high level logic embedded within the software is presented, as well as the steps being taken toward verification and validation (V&V) of proper functionality. Next, an initial prototype implementation of the described system is disclosed. Lastly, future work including development, testing, and system V&V is summarized.

Kinematic Source Rupture Process of the 2008 Iwate-Miyagi Nairiku Earthquake, a MW6.9 thrust earthquake in northeast Japan, using Strong Motion Data

NASA Astrophysics Data System (ADS)

Asano, K.; Iwata, T.

2008-12-01

The 2008 Iwate-Miyagi Nairiku earthquake (MJMA7.2) on June 14, 2008, is a thrust type inland crustal earthquake, which occurred in northeastern Honshu, Japan. In order to see strong motion generation process of this event, the source rupture process is estimated by the kinematic waveform inversion using strong motion data. Strong motion data of the K-NET and KiK-net stations and Aratozawa Dam are used. These stations are located 3-94 km from the epicenter. Original acceleration time histories are integrated into velocity and band- pass filtered between 0.05 and 1 Hz. For obtaining the detailed source rupture process, appropriate velocity structure model for Green's functions should be used. We estimated one dimensional velocity structure model for each strong motion station by waveform modeling of aftershock records. The elastic wave velocity, density, and Q-values for four sedimentary layers are assumed following previous studies. The thickness of each sedimentary layer depends on the station, which is estimated to fit the observed aftershock's waveforms by the optimization using the genetic algorithm. A uniform layered structure model is assumed for crust and upper mantle below the seismic bedrock. We succeeded to get a reasonable velocity structure model for each station to give a good fit of the main S-wave part in the observation of aftershocks. The source rupture process of the mainshock is estimated by the linear kinematic waveform inversion using multiple time windows (Hartzell and Heaton, 1983). A fault plane model is assumed following the moment tensor solution by F-net, NIED. The strike and dip angle is 209° and 51°, respectively. The rupture starting point is fixed at the hypocenter located by the JMA. The obtained source model shows a large slip area in the shallow portion of the fault plane approximately 6 km southwest of the hypocenter. The rupture of the asperity finishes within about 9 s. This large slip area corresponds to the area with surface break reported by the field survey group (e.g., AIST/GSJ, 2008), which supports the existence of the large slip close to the ground surface. But, most of surface offset found by the field survey are less than 0.5 m whereas the slip amount of the shallow asperity of the source inversion result is 3-4 m. In north of the hypocenter, the estimated slip amount is small. Slip direction is almost pure dip-slip for the entire fault (Northwest side goes up against southeast side). Total seismic moment is 2.6× 1019 Nm (MW 6.9). Acknowledgments: Strong motion data of K-NET and KiK-net operated by the National Research Institute for Earth Science and Disaster Prevention are used. Strong motion data of Aratozawa Dam obtained by Miyagi prefecture government is also used in the study.

26 CFR 1.1374-2 - Net recognized built-in gain.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 26 Internal Revenue 11 2010-04-01 2010-04-01 true Net recognized built-in gain. 1.1374-2 Section 1... (CONTINUED) INCOME TAXES Small Business Corporations and Their Shareholders § 1.1374-2 Net recognized built-in gain. (a) In general. An S corporation's net recognized built-in gain for any taxable year is the...

Tidal fluxes of mercury and methylmercury for Mendall Marsh, Penobscot River estuary, Maine.

PubMed

Turner, R R; Mitchell, C P J; Kopec, A D; Bodaly, R A

2018-05-08

Tidal marshes are both important sites of in situ methylmercury production and can be landscape sources of methylmercury to adjacent estuarine systems. As part of a regional investigation of the Hg-contaminated Penobscot River and Bay system, the tidal fluxes of total suspended solids, total mercury and methylmercury into and out of a regionally important mesohaline fluvial marsh complex, Mendall Marsh, were intensively measured over several tidal cycles and at two spatial scales to assess the source-sink function of the marsh with respect to the Penobscot River. Over four tidal cycles on the South Marsh River, the main channel through which water enters and exits Mendall Marsh, the marsh was a consistent sink over typical 12-h tidal cycles for total suspended solids (8.2 to 41 g m -2 ), total Hg (9.2 to 47 μg m -2 ), total filter-passing Hg (0.4 to 1.1 μg m -2 ), and total methylmercury (0.2 to 1.4 μg m -2 ). The marsh's source-sink function was variable for filter-passing methylmercury, acting as a net source during a large spring tide that inundated much of the marsh area and that is likely to occur during approximately 17% of tidal cycles. Additional measurements on a small tidal channel draining approximately 1% of the larger marsh area supported findings at the larger scale, but differences in the flux magnitude of filter-passing fractions suggest a highly non-conservative transport of these fractions through the tidal channels. Overall the results of this investigation demonstrate that Mendall Marsh is not a significant source of mercury or methylmercury to the receiving aquatic systems (Penobscot River and Bay). While there is evidence of a small net export of filter-passing (<0.4 μm pore size) methylmercury under some tidal conditions, the mass involved represents <3% of the mass of filter-passing methylmercury carried by the Penobscot River. Copyright © 2018. Published by Elsevier B.V.

Period-dependent source rupture behavior of the 2011 Tohoku earthquake estimated by multi period-band Bayesian waveform inversion

NASA Astrophysics Data System (ADS)

Kubo, H.; Asano, K.; Iwata, T.; Aoi, S.

2014-12-01

Previous studies for the period-dependent source characteristics of the 2011 Tohoku earthquake (e.g., Koper et al., 2011; Lay et al., 2012) were based on the short and long period source models using different method. Kubo et al. (2013) obtained source models of the 2011 Tohoku earthquake using multi period-bands waveform data by a common inversion method and discussed its period-dependent source characteristics. In this study, to achieve more in detail spatiotemporal source rupture behavior of this event, we introduce a new fault surface model having finer sub-fault size and estimate the source models in multi period-bands using a Bayesian inversion method combined with a multi-time-window method. Three components of velocity waveforms at 25 stations of K-NET, KiK-net, and F-net of NIED are used in this analysis. The target period band is 10-100 s. We divide this period band into three period bands (10-25 s, 25-50 s, and 50-100 s) and estimate a kinematic source model in each period band using a Bayesian inversion method with MCMC sampling (e.g., Fukuda & Johnson, 2008; Minson et al., 2013, 2014). The parameterization of spatiotemporal slip distribution follows the multi-time-window method (Hartzell & Heaton, 1983). The Green's functions are calculated by the 3D FDM (GMS; Aoi & Fujiwara, 1999) using a 3D velocity structure model (JIVSM; Koketsu et al., 2012). The assumed fault surface model is based on the Pacific plate boundary of JIVSM and is divided into 384 subfaults of about 16 * 16 km^2. The estimated source models in multi period-bands show the following source image: (1) First deep rupture off Miyagi at 0-60 s toward down-dip mostly radiating relatively short period (10-25 s) seismic waves. (2) Shallow rupture off Miyagi at 45-90 s toward up-dip with long duration radiating long period (50-100 s) seismic wave. (3) Second deep rupture off Miyagi at 60-105 s toward down-dip radiating longer period seismic waves then that of the first deep rupture. (4) Deep rupture off Fukushima at 90-135 s. The dominant-period difference of the seismic-wave radiation between two deep ruptures off Miyagi may result from the mechanism that small-scale heterogeneities on the fault are removed by the first rupture. This difference can be also interpreted by the concept of multi-scale dynamic rupture (Ide & Aochi, 2005).

Recent work on network application layer: MioNet, the virtual workplace for small businesses

NASA Astrophysics Data System (ADS)

Hesselink, Lambertus; Rizal, Dharmarus; Bjornson, Eric; Miller, Brian; Chan, Keith

2005-11-01

Small businesses must be extremely efficient and smartly leverage their resources, suppliers, and partners to successfully compete with larger firms. A successful small business requires a set of companies with interlocking business relationships that are dynamic and needs-based. There has been no software solution that creates a secure and flexible way to efficiently connect small business computer-based employees and partners. In this invited paper, we discuss MioNet, a secure and powerful data management platform which may provide millions of small businesses with a virtual workplace and help them to succeed.

Summer fluxes of methane and carbon dioxide from a pond and floating mat in a continental Canadian peatland

NASA Astrophysics Data System (ADS)

Burger, Magdalena; Berger, Sina; Spangenberg, Ines; Blodau, Christian

2016-06-01

Ponds smaller than 10 000 m2 likely account for about one-third of the global lake perimeter. The release of methane (CH4) and carbon dioxide (CO2) from these ponds is often high and significant on the landscape scale. We measured CO2 and CH4 fluxes in a temperate peatland in southern Ontario, Canada, in summer 2014 along a transect from the open water of a small pond (847 m2) towards the surrounding floating mat (5993 m2) and in a peatland reference area. We used a high-frequency closed chamber technique and distinguished between diffusive and ebullitive CH4 fluxes. CH4 fluxes and CH4 bubble frequency increased from a median of 0.14 (0.00 to 0.43) mmol m-2 h-1 and 4 events m-2 h-1 on the open water to a median of 0.80 (0.20 to 14.97) mmol m-2 h-1 and 168 events m-2 h-1 on the floating mat. The mat was a summer hot spot of CH4 emissions. Fluxes were 1 order of magnitude higher than at an adjacent peatland site. During daytime the pond was a net source of CO2 equivalents to the atmosphere amounting to 0.13 (-0.02 to 1.06) g CO2 equivalents m-2 h-1, whereas the adjacent peatland site acted as a sink of -0.78 (-1.54 to 0.29) g CO2 equivalents m-2 h-1. The photosynthetic CO2 uptake on the floating mat did not counterbalance the high CH4 emissions, which turned the floating mat into a strong net source of 0.21 (-0.11 to 2.12) g CO2 equivalents m-2 h-1. This study highlights the large small-scale variability of CH4 fluxes and CH4 bubble frequency at the peatland-pond interface and the importance of the often large ecotone areas surrounding small ponds as a source of greenhouse gases to the atmosphere.

Summer fluxes of methane and carbon dioxide from a pond and floating mat in a continental Canadian peatland

NASA Astrophysics Data System (ADS)

Blodau, Christian; Burger, Magdalena; Berger, Sina; Spangenberg, Ines

2016-04-01

Ponds smaller than 10000 m2 likely account for about one third of the global lake perimeter. The release of methane (CH4) and carbon dioxide (CO2) from these ponds is often high and significant on the landscape scale. We measured CO2 and CH4 fluxes in a temperate peatland in southern Ontario, Canada, in summer 2014 along a transect from the open water of a small pond (847 m2) towards the surrounding floating mat (5993 m2) and in a peatland reference area. We used a high-frequency closed chamber technique and distinguished between diffusive and ebullitive CH4 fluxes. CH4 fluxes and CH4 bubble frequency increased from a median of 0.14 (0.00 to 0.43) mmol m-2 h-1 and 4 events m-2 h-1 on the open water to a median of 0.80 (0.20 to 14.97) mmol m-2 h-1 and 168 events m-2 h-1 on the floating mat. The mat was a summer hot spot of CH4 emissions. Fluxes were one order of magnitude higher than at an adjacent peatland site. During daytime the pond was a net source of CO2 equivalents to the atmosphere amounting to 0.13 (-0.02 to 1.06) g CO2 equivalents m-2 h-1, whereas the adjacent peatland site acted as a sink of -0.78 (-1.54 to 0.29) g CO2 equivalents m-2 h-1. The photosynthetic CO2 uptake on the floating mat did not counterbalance the high CH4 emissions, which turned the floating mat into a strong net source of 0.21 (-0.11 to 2.12) g CO2 equivalents m-2 h-1. This study highlights the large small-scale variability of CH4 fluxes and CH4 bubble frequency at the peatland-pond interface and the importance of the often large ecotone areas surrounding small ponds as a source of greenhouse gases to the atmosphere.

Net subterranean estuarine export fluxes of dissolved inorganic C, N, P, Si, and total alkalinity into the Jiulong River estuary, China

NASA Astrophysics Data System (ADS)

Wang, Guizhi; Wang, Zhangyong; Zhai, Weidong; Moore, Willard S.; Li, Qing; Yan, Xiuli; Qi, Di; Jiang, Yuwu

2015-01-01

To evaluate geochemical impacts of the subterranean estuary (STE) on the Jiulong River estuary, China, we estimated seasonal fluxes of subterranean water discharge into the estuary based on the mass balance of radium isotopes and net subterranean export fluxes of dissolved inorganic C (DIC), N (DIN), Si (DSi), soluble reactive phosphorus (SRP), and total alkalinity (TA). Based on 226Ra data, the subterranean discharge (in 107 m3 d-1) was estimated to be 0.29-0.60 in the spring, 0.69-1.44 in the summer, 0.45-0.93 in the fall, and 0.26-0.54 in the winter. This was equivalent to 8-19% of the concomitant river discharge. The net spatially integrated material fluxes from the STE into the estuary were equivalent up to 45-110% of the concomitant riverine fluxes for DIC and TA, around 14-32% for DSi and 7-19% for DIN, and negligible for SRP. Paradoxically, the mixing lines along the salinity gradient revealed no apparent additions of these species. These additions are not revealed because the STE is a relatively small spatially-averaged source (at most 11% of the total input at steady state) that spreads throughout the estuary as a non-point source in contrast to the major point sources of the river and the ocean for the estuary and a true open ocean endmember is likely lacking. Greater water flushing in the summer might dilute the STE effect on the mixing lines even more. The great spatial variation in salinity in the estuary introduced the major uncertainty in our estimates of the flushing time, which further affected the estimate of the subterranean discharge and associated material fluxes. Additionally, the great spatial variation in the STE endmember caused the relatively large ranges in these flux estimates. Despite apparent conservative mixing of DIC, DIN, and DSi in estuaries, net subterranean exports must be taken into account in evaluating geochemical impacts of estuarine exports on shelf waters.

On the energy balance closure and net radiation in complex terrain

PubMed Central

Wohlfahrt, Georg; Hammerle, Albin; Niedrist, Georg; Scholz, Katharina; Tomelleri, Enrico; Zhao, Peng

2017-01-01

In complex, sloping terrain, horizontal measurements of net radiation are not reflective of the radiative energy available for the conductive and convective heat exchange of the underlying surface. Using data from a grassland site on a mountain slope characterised by spatial heterogeneity in inclination and aspect, we tested the hypothesis that a correction of the horizontal net radiation measurements which accounts for the individual footprint contributions of the various surfaces to the measured sensible and latent heat eddy covariance fluxes will yield more realistic slope-parallel net radiation estimates compared to a correction based on the average inclination and aspect of the footprint. Our main result is that both approaches led to clear, but very similar improvements in the phase between available energy and the sum of the latent and sensible heat fluxes. As a consequence the variance in the sum of latent and sensible heat flux explained by available radiation improved by >10 %, while energy balance closure improved only slightly. This is shown to be mainly due to the average inclination and aspect corresponding largely with the inclination and aspect of the main flux source area in combination with a limited sensitivity of the slope correction to small angular differences in, particularly, inclination and aspect. We conclude with a discussion of limitations of the present approach and future research directions. PMID:28066093

ROOT.NET: Using ROOT from .NET languages like C# and F#

NASA Astrophysics Data System (ADS)

Watts, G.

2012-12-01

ROOT.NET provides an interface between Microsoft's Common Language Runtime (CLR) and .NET technology and the ubiquitous particle physics analysis tool, ROOT. ROOT.NET automatically generates a series of efficient wrappers around the ROOT API. Unlike pyROOT, these wrappers are statically typed and so are highly efficient as compared to the Python wrappers. The connection to .NET means that one gains access to the full series of languages developed for the CLR including functional languages like F# (based on OCaml). Many features that make ROOT objects work well in the .NET world are added (properties, IEnumerable interface, LINQ compatibility, etc.). Dynamic languages based on the CLR can be used as well, of course (Python, for example). Additionally it is now possible to access ROOT objects that are unknown to the translation tool. This poster will describe the techniques used to effect this translation, along with performance comparisons, and examples. All described source code is posted on the open source site CodePlex.

Trends in Renewable Energy Consumption and Electricity

EIA Publications

2012-01-01

Presents a summary of the nation’s renewable energy consumption in 2010 along with detailed historical data on renewable energy consumption by energy source and end-use sector. Data presented also includes renewable energy consumption for electricity generation and for non-electric use by energy source, and net summer capacity and net generation by energy source and state. The report covers the period from 2006 through 2010.

Horizontal ichthyoplankton tow-net system with unobstructed net opening

USGS Publications Warehouse

Nester, Robert T.

1987-01-01

The larval fish sampler described here consists of a modified bridle, frame, and net system with an obstruction-free net opening and is small enough for use on boats 10 m or less in length. The tow net features a square net frame attached to a 0.5-m-diameter cylinder-on-cone plankton net with a bridle designed to eliminate all obstructions forward of the net opening, significantly reducing currents and vibrations in the water directly preceding the net. This system was effective in collecting larvae representing more than 25 species of fish at sampling depths ranging from surface to 10 m and could easily be used at greater depths.

Ion extraction capabilities of closely spaced grids

NASA Technical Reports Server (NTRS)

Rovang, D. C.; Wilbur, P. J.

1982-01-01

The ion extraction capabilities of accelerator systems with small screen hole diameters (less than 2.0 mm) are investigated at net-accelerating voltages of 100, 300, and 500 V. Results show that the impingement-limited perveance is not dramatically affected by reductions in screen hole diameter to 1.0 mm, but impingement-limited performance was found to be dependent on the grid separation distance, the discharge-to-total accelerating voltage ratio, and the net-to-total accelerating voltage ratio. Results obtained using small hole diameters and closely spaced grids indicate a new mode of grid operation where high current density operation can be achieved with a specified net acceleration voltage by operating the grids at a high rather than low net-to-total acceleration voltage. Beam current densities as high as 25 mA/sq cm were obtained using grids with 1.0 mm diameter holes operating at a net accelerating voltage of 500 V.

RadioSource.NET: Case-Study of a Collaborative Land-Grant Internet Audio Project.

ERIC Educational Resources Information Center

Sohar, Kathleen; Wood, Ashley M.; Ramirez, Roberto

2002-01-01

Provides a case study of RadioSource.NET, an Internet broadcasting venture developed collaboratively by land-grant university communication departments to share resources, increase online distribution, and promote access to agricultural and natural and life science research. Describes planning, marketing, and implementation processes. (Contains 18…

Navigating the Net for Grant Money.

ERIC Educational Resources Information Center

Schnitzer, Denise K.

1996-01-01

The Internet offers educators a wealth of grant resources and information on securing funds for projects. The first step is finding a funding source whose goals match those of the desired project's. Certain Net search engines have excellent capabilities. Grantsweb has accessible, organized links to federal and nonfederal grants sources. Other…

ChemNet: A Transferable and Generalizable Deep Neural Network for Small-Molecule Property Prediction

DOE Office of Scientific and Technical Information (OSTI.GOV)

Goh, Garrett B.; Siegel, Charles M.; Vishnu, Abhinav

With access to large datasets, deep neural networks through representation learning have been able to identify patterns from raw data, achieving human-level accuracy in image and speech recognition tasks. However, in chemistry, availability of large standardized and labelled datasets is scarce, and with a multitude of chemical properties of interest, chemical data is inherently small and fragmented. In this work, we explore transfer learning techniques in conjunction with the existing Chemception CNN model, to create a transferable and generalizable deep neural network for small-molecule property prediction. Our latest model, ChemNet learns in a semi-supervised manner from inexpensive labels computed frommore » the ChEMBL database. When fine-tuned to the Tox21, HIV and FreeSolv dataset, which are 3 separate chemical tasks that ChemNet was not originally trained on, we demonstrate that ChemNet exceeds the performance of existing Chemception models, contemporary MLP models that trains on molecular fingerprints, and it matches the performance of the ConvGraph algorithm, the current state-of-the-art. Furthermore, as ChemNet has been pre-trained on a large diverse chemical database, it can be used as a universal “plug-and-play” deep neural network, which accelerates the deployment of deep neural networks for the prediction of novel small-molecule chemical properties.« less

Initial Results from the Micro-pulse Lidar Network (MPL-Net)

NASA Technical Reports Server (NTRS)

Welton, Ellsworth J.; Campbell, James R.; Berkoff, Timothy A.; Spinhirne, James D.; Ginoux, Paul; Starr, David OC. (Technical Monitor)

2001-01-01

The micro-pulse lidar system (MPL) was developed in the early 1990s and was the first small, eye-safe, and autonomous lidar built for full time monitoring of cloud and aerosol vertical distributions. In 2000, a new project using MPL systems was started at NASA Goddard Space Flight Center. This new project, the Micro-pulse Lidar Network or MPL-Net, was created to provide long-term observations of aerosol and cloud vertical profiles at key sites around the world. This is accomplished using both NASA operated sites and partnerships with other organizations owning MPL systems. The MPL-Net sites are co-located with NASA AERONET sunphotometers to provide aerosol optical depth data needed for calibration of the MPL. In addition to the long-term sites, MPL-Net provides lidar support for a limited number of field experiments and ocean cruises each year. We will present an overview of the MPL-Net project and show initial results from the first two MPL-Net sites at the South Pole and at Goddard Space Flight Center. Observations of dust layers transported from the Gobi desert, across the Pacific Ocean, to the east coast of the United States will also be shown. MPL-Net affiliated instruments were in place at the desert source region in China, on a research vessel in the Sea of Japan, at ARM sites in Alaska and Oklahoma, and finally at our home site in Maryland (GSFC) during the massive dust storms that occurred in April 2001. The MPL observations of dust layers at each location are shown in comparison to dust layers predicted using the Georgia Tech/Goddard Global Ozone Chemistry Aerosol Radiation and Transport model (GOCART). Finally, the MPL-Net project is the primary ground-validation program for the Geo-Science Laser Altimeter System (GLAS) satellite lidar project (launch date 2002). We will present an overview demonstrating how MPL-Net results are used to help prepare the GLAS data processing algorithms and assist in the calibration/validation of the GLAS data products.

Initial Results From The Micro-pulse Lidar Network (MPL-Net)

NASA Astrophysics Data System (ADS)

Welton, E. J.; Campbell, J. R.; Berkoff, T. A.; Spinhirne, J. D.; Ginoux, P.

2001-12-01

The micro-pulse lidar system (MPL) was developed in the early 1990s and was the first small, eye-safe, and autonomous lidar built for fulltime monitoring of cloud and aerosol vertical distributions. In 2000, a new project using MPL systems was started at NASA Goddard Space Flight Center. This new project, the Micro-pulse Lidar Network or MPL-Net, was created to provide long-term observations of aerosol and cloud vertical profiles at key sites around the world. This is accomplished using both NASA operated sites and partnerships with other organizations owning MPL systems. The MPL-Net sites are co-located with NASA AERONET sunphotometers to provide aerosol optical depth data needed for calibration of the MPL. In addition to the long-term sites, MPL-Net provides lidar support for a limited number of field experiments and ocean cruises each year. We will present an overview of the MPL-Net project and show initial results from the first two MPL-Net sites at the South Pole and at Goddard Space Flight Center. Observations of dust layers transported from the desert regions of China, across the Pacific Ocean, to the east coast of the United States will also be shown. MPL-Net affiliated instruments were in place at the desert source region in China, on a research vessel in the Sea of Japan, at ARM sites in Alaska and Oklahoma, and finally at our home site in Maryland (GSFC) during the massive dust storms that occurred in April 2001. The MPL observations of dust layers at each location are shown in comparison to dust layers predicted using the Georgia Tech/Goddard Global Ozone Chemistry Aerosol Radiation and Transport model (GOCART). Finally, the MPL-Net project is the primary ground-validation program for the Geo-Science Laser Altimeter System (GLAS) satellite lidar project (launch date 2002). We will present an overview demonstrating how MPL-Net results are used to help prepare the GLAS data processing algorithms and assist in the calibration/validation of the GLAS data products.

KM3NeT/ARCA sensitivity to point-like neutrino sources

NASA Astrophysics Data System (ADS)

Trovato, A.; KM3NeT Collaboration

2017-09-01

KM3NeT is network of deep-sea neutrino telescopes in the Mediterranean Sea aiming at the discovery of cosmic neutrino sources (ARCA) and the determination of the neutrino mass hierarchy (ORCA). The geographical location of KM3NeT in the Northern hemisphere allows to observe most of the Galactic Plane, including the Galactic Centre. Thanks to its good angular resolution, prime targets of KM3NeT/ARCA are point-like neutrino sources and in particular galactic sources.

Greenhouse gas emissions from alternative futures of deforestation and agricultural management in the southern Amazon

PubMed Central

Galford, Gillian L.; Melillo, Jerry M.; Kicklighter, David W.; Cronin, Timothy W.; Cerri, Carlos E. P.; Mustard, John F.; Cerri, Carlos C.

2010-01-01

The Brazilian Amazon is one of the most rapidly developing agricultural areas in the world and represents a potentially large future source of greenhouse gases from land clearing and subsequent agricultural management. In an integrated approach, we estimate the greenhouse gas dynamics of natural ecosystems and agricultural ecosystems after clearing in the context of a future climate. We examine scenarios of deforestation and postclearing land use to estimate the future (2006–2050) impacts on carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O) emissions from the agricultural frontier state of Mato Grosso, using a process-based biogeochemistry model, the Terrestrial Ecosystems Model (TEM). We estimate a net emission of greenhouse gases from Mato Grosso, ranging from 2.8 to 15.9 Pg CO2-equivalents (CO2-e) from 2006 to 2050. Deforestation is the largest source of greenhouse gas emissions over this period, but land uses following clearing account for a substantial portion (24–49%) of the net greenhouse gas budget. Due to land-cover and land-use change, there is a small foregone carbon sequestration of 0.2–0.4 Pg CO2-e by natural forests and cerrado between 2006 and 2050. Both deforestation and future land-use management play important roles in the net greenhouse gas emissions of this frontier, suggesting that both should be considered in emissions policies. We find that avoided deforestation remains the best strategy for minimizing future greenhouse gas emissions from Mato Grosso. PMID:20651250

BioNetFit: a fitting tool compatible with BioNetGen, NFsim and distributed computing environments

DOE PAGES

Thomas, Brandon R.; Chylek, Lily A.; Colvin, Joshua; ...

2015-11-09

Rule-based models are analyzed with specialized simulators, such as those provided by the BioNetGen and NFsim open-source software packages. Here in this paper, we present BioNetFit, a general-purpose fitting tool that is compatible with BioNetGen and NFsim. BioNetFit is designed to take advantage of distributed computing resources. This feature facilitates fitting (i.e. optimization of parameter values for consistency with data) when simulations are computationally expensive.

Targeting Net Zero Energy for Military Installations (Presentation)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Burman, K.

2012-05-01

Targeting Net Zero Energy for Military Installations in Kaneohe Bay, Hawaii. A net zero energy installation (NZEI) is one that produces as much energy from on-site renewable sources as it consumes. NZEI assessment provides a systematic approach to energy projects.

Tropical forests are a net carbon source based on aboveground measurements of gain and loss.

PubMed

Baccini, A; Walker, W; Carvalho, L; Farina, M; Sulla-Menashe, D; Houghton, R A

2017-10-13

The carbon balance of tropical ecosystems remains uncertain, with top-down atmospheric studies suggesting an overall sink and bottom-up ecological approaches indicating a modest net source. Here we use 12 years (2003 to 2014) of MODIS pantropical satellite data to quantify net annual changes in the aboveground carbon density of tropical woody live vegetation, providing direct, measurement-based evidence that the world's tropical forests are a net carbon source of 425.2 ± 92.0 teragrams of carbon per year (Tg C year -1 ). This net release of carbon consists of losses of 861.7 ± 80.2 Tg C year -1 and gains of 436.5 ± 31.0 Tg C year -1 Gains result from forest growth; losses result from deforestation and from reductions in carbon density within standing forests (degradation or disturbance), with the latter accounting for 68.9% of overall losses. Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

Digestion and nutrient net fluxes across the rumen, and the mesenteric- and portal-drained viscera in sheep fed with fresh forage twice daily: net balance and dynamic aspects.

PubMed

Rémond, Didier; Bernard, Laurence; Chauveau, Béatrice; Nozière, Pierre; Poncet, Claude

2003-05-01

Digestion and portal net flux of nutrients were studied in sheep fed twice daily with fresh orchard-grass. Digestive flows were measured in six fistulated sheep using the double-marker technique. Three sheep were fitted with catheters and blood-flow probes, allowing nutrient net flux measurements across the portal-drained viscera (PDV), the mesenteric-drained viscera (MDV) and the rumen. Total tract apparent digestion of N was similar to portal net appearance of N, calculated as the sum of free amino acids (FAA), peptide amino acids (PAA), NH3, and urea net fluxes. PAA accounted for 25 % of non-protein amino acid net release across the PDV. With the exception of glycine and glutamate, the small intestine was the main contributor to this PAA net release. The essential amino acid (EAA) apparent disappearance between the duodenum and the ileum was lower than the net appearance of EAA (FAA + PAA) across the MDV. The value of PDV:MDV flux of free EAA was, on average, 78 %. The rumen accounted for 30 % of the net uptake of EAA by the PDV tissues not drained by the mesenteric vein. Rumen net release of acetate, propionate, butyrate, 3-hydroxybutyrate, and lactate accounted for 70, 55, 46, 77 and 52 %, respectively, of their portal net releases. Conversely, the small intestine was a net consumer of arterial acetate and 3-hydroxybutyrate. Dynamic study of nutrient net fluxes across the PDV showed that throughout a feeding cycle, the liver faced a constant flux of amino acids (AA), whereas volatile fatty acid and NH3 net fluxes varied in response to the meal. The present study specified, in forage-fed sheep, the partitioning of nutrient net fluxes across the PDV and the role of peptides in portal net release of AA.

Turning Ocean Mixing Upside Down

NASA Astrophysics Data System (ADS)

Ferrari, Raffaele; Mashayek, Ali; Campin, Jean-Michael; McDougall, Trevor; Nikurashin, Maxim

2015-11-01

It is generally understood that small-scale mixing, such as is caused by breaking internal waves, drives upwelling of the densest ocean waters that sink to the ocean bottom at high latitudes. However the observational evidence that small-scale mixing is more vigorous close to the ocean bottom than above implies that small-scale mixing converts light waters into denser ones, thus driving a net sinking of abyssal water. It is shown that abyssal waters return to the surface along weakly stratified boundary layers, where the small-scale mixing of density decays to zero. The net ocean meridional overturning circulation is thus the small residual of a large sinking of waters, driven by small-scale mixing in the stratified interior, and an equally large upwelling, driven by the reduced small-scale mixing along the ocean boundaries. Thus whether abyssal waters upwell or sink in the net cannot be inferred simply from the vertical profile of mixing intensity, but depends also on the ocean hypsometry, i.e. the shape of the bottom topography. The implications of this result for our understanding of the abyssal ocean circulation will be presented with a combination of numerical models and observations.

Livelihood analysis of floating net cages fish farmers at Sendang Village Sub-district of Gajah Mungkur Reservoir of Wonogiri Regency

NASA Astrophysics Data System (ADS)

Nissa, Z. N. A.; Suadi; Sukardi

2018-03-01

Floating net cages farming (KJA) is one of the main livelihood resources in Sendang Village, Gajah Mungkur Reservoir. The purposes of this study were to determine the livelihood asset of fish farmers, the problems of livelihood asset management and the utilization strategy to support aquaculture businesses also farmers livelihood. The study showed that the natural capital, provides easiest way to farmer in fish cultivation. The fish farmers also have good technical capabilities in fish cultivation and the product has high demand and value which is essential for farmers livelihood. The main problems faced by small-scale farmers and all large-scale farmers were transition period, and the rise of cost price which sometime cause the failure in the business. The strategies to deal the problems include technological adjustment, managing the pattern of stocking of tilapia seeds and income source diversification. There were differences in dealing the rise of cost. The small-scale farmers borrow from the bank, while medium-scale farmers use their savings. Another difference of livelihood strategy was the management of financial capital. However, various strategies were still required to increase the livelihood of fish farmers and could address the vulnerabilities in the cultivation of KJA as a common pool resources.

Estimating small amplitude tremor sources

NASA Astrophysics Data System (ADS)

Katakami, S.; Ito, Y.; Ohta, K.

2017-12-01

Various types of slow earthquakes have been recently observed at both the updip and downdip edges of the coseismic slip areas [Obara and Kato, 2016]. Frequent occurrence of slow earthquakes may help us to reveal the physics underlying megathrust events as useful analogs. Maeda and Obara [2009] estimated spatiotemporal distribution of seismic energy radiation from low-frequency tremors. They applied their method to only the tremors, whose hypocenters had been decided with multiple station method. However, recently Katakami et al. (2016) identified a lot of continuous tremors with small amplitude that were not recorded multiple stations. These small events should be important to reveal the whole slow earthquake activity and to understand strain condition around a plate boundary in subduction zones. First, we apply the modified frequency scanning method (mFSM) at a single station to NIED Hi-net data in the southwestern Japan to understand whole tremor activity which were included weak signal tremors. Second, we developed a method to identify the tremor source area by using the difference of apparent tremor energy at each station by mFSM. We estimated the apparent source tremor energy after correcting both site amplification factor and geometrical spreading. Finally we calculate a tremor source area if the difference of apparent tremor energy between each pair of sites is the smallest. We checked a validity of this analysis by using only tremors which were already detected by envelope correlation method [Idehara et al., 2014]. We calculated the average amplitude as apparent tremor energy in 5 minutes window after occurring tremor at each station. Our results almost consistent to hypocenters which were determined the envelope correlation method. We successfully determined apparent tremor source areas of weak continuous tremors after estimating possible tremor occurrence time windows by using mFSM.

Africa-Wide Monitoring of Small Surface Water Bodies Using Multisource Satellite Data: A Monitoring System for FEWS NET

NASA Astrophysics Data System (ADS)

Velpuri, N. M.; Senay, G. B.; Rowland, J.; Budde, M. E.; Verdin, J. P.

2015-12-01

Continental Africa has the largest volume of water stored in wetlands, large lakes, reservoirs and rivers, yet it suffers with problems such as water availability and access. Furthermore, African countries are amongst the most vulnerable to the impact of natural hazards such as droughts and floods. With climate change intensifying the hydrologic cycle and altering the distribution and frequency of rainfall, the problem of water availability and access is bound to increase. The U.S Geological Survey Famine Early Warning Systems Network (FEWS NET), funded by the U.S. Agency for International Development, has initiated a large-scale project to monitor small to medium surface water bodies in Africa. Under this project, multi-source satellite data and hydrologic modeling techniques are integrated to monitor these water bodies in Africa. First, small water bodies are mapped using satellite data such as Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER), Landsat, and high resolution Google Earth imagery. Stream networks and watersheds for each water body are identified using Shuttle Radar Topography Mission (SRTM) digital elevation data. Finally, a hydrologic modeling approach that uses satellite-derived precipitation estimates and evapotranspiration data calculated from global data assimilation system climate parameters is applied to model water levels. This approach has been implemented to monitor nearly 300 small water bodies located in 10 countries in sub-Saharan Africa. Validation of modeled scaled depths with field-installed gauge data in East Africa demonstrated the ability of the model to capture both the spatial patterns and seasonal variations. Modeled scaled estimates captured up to 60% of the observed gauge variability with an average RMSE of 22%. Current and historic data (since 2001) on relative water level, precipitation, and evapotranspiration for each water body is made available in near real time. The water point monitoring network will be further expanded to cover other pastoral regions of sub-Saharan Africa. This project provides timely information on water availability that supports FEWS NET monitoring activities in Africa. Information on water availability produced in this study would further increase the resilience of local communities to floods and droughts.

Surveillance for White-Nose Syndrome in the bat community at El Malpais National Monument, New Mexico, 2011

USGS Publications Warehouse

Valdez, Ernest W.

2012-01-01

From late winter to summer 2011, the U.S. Geological Survey Arid Lands Field Station conducted mist-netting efforts at El Malpais National Monument and on adjacent lands belonging to Bureau of Land Management and U.S. Forest Service to detect the occurrence of white-nose syndrome or causal fungal agent (Geomyces destructans). During this assessment, 421 bats belonging to 8 species were documented at El Malpais National Monument and adjacent lands. None of these captures showed evidence for the presence of white-nose syndrome or G. destructans, but it is possible that the subtle signs of some infections may not have been observed. Throughout the field efforts, Laguna de Juan Garcia was the only water source located on El Malpais National Monument and was netted on June 20 and 27, July 25, and August 2, 2011. During these dates, a total of 155 bats were captured, belonging to eight species including: Corynorhinus townsendii (Townsend's Big-Eared Bat), Eptesicus fuscus (Big Brown Bat), Lasionycterics noctivagans (Silver-Haired Bat), Myotis ciliolabrum (Small-Footed Myotis), M. evotis (Long-eared myotis), M. thysanodes (Fringed Myotis), M. volans (Long-Legged Myotis), and Tadarida brasiliensis (Brazilian Free-Tailed Bat). Overall, Laguna de Juan Garcia had the greatest number of captures (79 bats) during one night compared to the other sites netted on adjacent lands and had the greatest species diversity of 8 species netted, not including Euderma maculatum (Spotted Bat) that was detected by its audible calls as it flew overhead. Laguna de Juan Garcia is an important site to bats because of its accessibility by all known occurring species, including the less-maneuverable T. brasiliensis that is known to form large colonies in the park. Laguna de Juan Garcia is also important as a more permanent water source during drought conditions in the earlier part of the spring and summer, as observed in 2011.

Implications of net energy-return-on-investment for a low-carbon energy transition

NASA Astrophysics Data System (ADS)

King, Lewis C.; van den Bergh, Jeroen C. J. M.

2018-04-01

Low-carbon energy transitions aim to stay within a carbon budget that limits potential climate change to 2 °C—or well below—through a substantial growth in renewable energy sources alongside improved energy efficiency and carbon capture and storage. Current scenarios tend to overlook their low net energy returns compared to the existing fossil fuel infrastructure. Correcting from gross to net energy, we show that a low-carbon transition would probably lead to a 24-31% decline in net energy per capita by 2050, which implies a strong reversal of the recent rising trends of 0.5% per annum. Unless vast end-use efficiency savings can be achieved in the coming decades, current lifestyles might be impaired. To maintain the present net energy returns, solar and wind renewable power sources should grow two to three times faster than in other proposals. We suggest a new indicator, `energy return on carbon', to assist in maximizing the net energy from the remaining carbon budget.

Simulating the hydrologic cycle in coal mining subsidence areas with a distributed hydrologic model

PubMed Central

Wang, Jianhua; Lu, Chuiyu; Sun, Qingyan; Xiao, Weihua; Cao, Guoliang; Li, Hui; Yan, Lingjia; Zhang, Bo

2017-01-01

Large-scale ground subsidence caused by coal mining and subsequent water-filling leads to serious environmental problems and economic losses, especially in plains with a high phreatic water level. Clarifying the hydrologic cycle in subsidence areas has important practical value for environmental remediation, and provides a scientific basis for water resource development and utilisation of the subsidence areas. Here we present a simulation approach to describe interactions between subsidence area water (SW) and several hydrologic factors from the River-Subsidence-Groundwater Model (RSGM), which is developed based on the distributed hydrologic model. Analysis of water balance shows that the recharge of SW from groundwater only accounts for a small fraction of the total water source, due to weak groundwater flow in the plain. The interaction between SW and groundwater has an obvious annual cycle. The SW basically performs as a net source of groundwater in the wet season, and a net sink for groundwater in the dry season. The results show there is an average 905.34 million m3 per year of water available through the Huainan coal mining subsidence areas (HCMSs). If these subsidence areas can be integrated into water resource planning, the increasingly precarious water supply infrastructure will be strengthened. PMID:28106048

A method to stabilise the performance of negatively fed KM3NeT photomultipliers

NASA Astrophysics Data System (ADS)

Adrián-Martínez, S.; Ageron, M.; Aiello, S.; Albert, A.; Ameli, F.; Anassontzis, E. G.; Andre, M.; Androulakis, G.; Anghinolfi, M.; Anton, G.; Ardid, M.; Avgitas, T.; Barbarino, G.; Barbarito, E.; Baret, B.; Barrios-Martí, J.; Belias, A.; Berbee, E.; van den Berg, A.; Bertin, V.; Beurthey, S.; van Beveren, V.; Beverini, N.; Biagi, S.; Biagioni, A.; Billault, M.; Bondì, M.; Bormuth, R.; Bouhadef, B.; Bourlis, G.; Bourret, S.; Boutonnet, C.; Bouwhuis, M.; Bozza, C.; Bruijn, R.; Brunner, J.; Buis, E.; Buompane, R.; Busto, J.; Cacopardo, G.; Caillat, L.; Calamai, M.; Calvo, D.; Capone, A.; Caramete, L.; Cecchini, S.; Celli, S.; Champion, C.; Cherubini, S.; Chiarella, V.; Chiarelli, L.; Chiarusi, T.; Circella, M.; Classen, L.; Cobas, D.; Cocimano, R.; Coelho, J. A. B.; Coleiro, A.; Colonges, S.; Coniglione, R.; Cordelli, M.; Cosquer, A.; Coyle, P.; Creusot, A.; Cuttone, G.; D'Amato, C.; D'Amico, A.; D'Onofrio, A.; De Bonis, G.; De Sio, C.; Di Capua, F.; Di Palma, I.; Distefano, C.; Donzaud, C.; Dornic, D.; Dorosti-Hasankiadeh, Q.; Drakopoulou, E.; Drouhin, D.; Durocher, M.; Eberl, T.; Eichie, S.; van Eijk, D.; El Bojaddaini, I.; Elsaesser, D.; Enzenhöfer, A.; Favaro, M.; Fermani, P.; Ferrara, G.; Frascadore, G.; Furini, M.; Fusco, L. A.; Gal, T.; Galatà, S.; Garufi, F.; Gay, P.; Gebyehu, M.; Giacomini, F.; Gialanella, L.; Giordano, V.; Gizani, N.; Gracia, R.; Graf, K.; Grégoire, T.; Grella, G.; Grmek, A.; Guerzoni, M.; Habel, R.; Hallmann, S.; van Haren, H.; Harissopulos, S.; Heid, T.; Heijboer, A.; Heine, E.; Henry, S.; Hernández-Rey, J. J.; Hevinga, M.; Hofestädt, J.; Hugon, C. M. F.; Illuminati, G.; James, C. W.; Jansweijer, P.; Jongen, M.; de Jong, M.; Kadler, M.; Kalekin, O.; Kappes, A.; Katz, U. F.; Keller, P.; Kieft, G.; Kießling, D.; Koffeman, E. N.; Kooijman, P.; Kouchner, A.; Kreter, M.; Kulikovskiy, V.; Lahmann, R.; Lamare, P.; Leisos, A.; Leonora, E.; Clark, M. Lindsey; Liolios, A.; Llorens Alvarez, C. D.; Lo Presti, D.; Löhner, H.; Lonardo, A.; Lotze, M.; Loucatos, S.; Maccioni, E.; Mannheim, K.; Manzali, M.; Margiotta, A.; Margotti, A.; Marinelli, A.; Mariš, O.; Markou, C.; Martínez-Mora, J. A.; Martini, A.; Marzaioli, F.; Mele, R.; Melis, K. W.; Michael, T.; Migliozzi, P.; Migneco, E.; Mijakowski, P.; Miraglia, A.; Mollo, C. M.; Mongelli, M.; Morganti, M.; Moussa, A.; Musico, P.; Musumeci, M.; Nicolau, C. A.; Olcina, I.; Olivetto, C.; Orlando, A.; Orzelli, A.; Pancaldi, G.; Paolucci, A.; Papaikonomou, A.; Papaleo, R.; Păvălaš, G. E.; Peek, H.; Pellegrini, G.; Pellegrino, C.; Perrina, C.; Pfutzner, M.; Piattelli, P.; Pikounis, K.; Poma, G. E.; Popa, V.; Pradier, T.; Pratolongo, F.; Pühlhofer, G.; Pulvirenti, S.; Quinn, L.; Racca, C.; Raffaelli, F.; Randazzo, N.; Real, D.; Resvanis, L.; Reubelt, J.; Riccobene, G.; Rossi, C.; Rovelli, A.; Saldaña, M.; Salvadori, I.; Samtleben, D. F. E.; Sánchez García, A.; Sánchez Losa, A.; Sanguineti, M.; Santangelo, A.; Santonocito, D.; Sapienza, P.; Schimmel, F.; Schmelling, J.; Schnabel, J.; Sciacca, V.; Sedita, M.; Seitz, T.; Sgura, I.; Simeone, F.; Sipala, V.; Spisso, B.; Spurio, M.; Stavropoulos, G.; Steijger, J.; Stellacci, S. M.; Stransky, D.; Taiuti, M.; Tayalati, Y.; Terrasi, F.; Tézier, D.; Theraube, S.; Timmer, P.; Töonnis, C.; Trasatti, L.; Travaglini, R.; Trovato, A.; Tsirigotis, A.; Tzamarias, S.; Tzamariudaki, E.; Vallage, B.; Van Elewyck, V.; Vermeulen, J.; Versari, F.; Vicini, P.; Viola, S.; Vivolo, D.; Volkert, M.; Wiggers, L.; Wilms, J.; de Wolf, E.; Zachariadou, K.; Zani, S.; Zornoza, J. D.; Zúñiga, J.

2016-12-01

The KM3NeT research infrastructure, currently under construction in the Mediterranean Sea, will host neutrino telescopes for the identification of neutrino sources in the Universe and for studies of the neutrino mass hierarchy. These telescopes will house hundreds of thousands of photomultiplier tubes that will have to be operated in a stable and reliable fashion. In this context, the stability of the dark counts has been investigated for photomultiplier tubes with negative high voltage on the photocathode and held in insulating support structures made of 3D printed nylon material. Small gaps between the rigid support structure and the photomultiplier tubes in the presence of electric fields can lead to discharges that produce dark count rates that are highly variable. A solution was found by applying the same insulating varnish as used for the high voltage bases directly to the outside of the photomultiplier tubes. This transparent conformal coating provides a convenient and inexpensive method of insulation.

Partitioning of nutrient net fluxes across the portal-drained viscera in sheep fed twice daily: effect of dietary protein degradability.

PubMed

Rémond, Didier; Bernard, Laurence; Savary-Auzeloux, Isabelle; Nozière, Pierre

2009-08-01

Extrusion is used to decrease leguminous seed protein degradability in the rumen in order to shift part of the dietary protein digestion towards the small intestine. The effect of such displacement of digestion site on the partitioning of nutrient net fluxes across the gastrointestinal tract was studied using four sheep fitted with catheters and blood-flow probes, allowing measurements across the rumen, the mesenteric-drained viscera (MDV) and the portal-drained viscera (PDV). Two diets containing 34 % of pea seeds were tested in a crossover design. They differed only according to pea treatment: raw pea (RP) or extruded pea (EP) diet. Rumen undegradable protein (RUP) accounted for 23 and 40 % of dietary crude protein for RP and EP diets, respectively. Across the rumen wall, ammonia net flux was lower with EP diet, whereas urea net flux was not different. Across the MDV, free amino acid (FAA) net flux was greater with EP diet, whereas peptide amino acid net flux was not different, accounting for 7 % of the non-protein amino acid net release. From RP to EP diet, PDV net flux of ammonia decreased by 23 %, whereas FAA net release increased by 21 %. The difference in dietary RUP did not affect the PDV net flux of SCFA, 3-hydroxybutyrate, lactate and glucose. In conclusion, the partial shift in pea protein digestion from the rumen to the small intestine did not affect the portal net balance of N, but decreased N loss from the rumen, and increased amino acid intestinal absorption and portal delivery.

Paraneoplastic antigen Ma2 autoantibodies as specific blood biomarkers for detection of early recurrence of small intestine neuroendocrine tumors.

PubMed

Cui, Tao; Hurtig, Monica; Elgue, Graciela; Li, Su-Chen; Veronesi, Giulia; Essaghir, Ahmed; Demoulin, Jean-Baptiste; Pelosi, Giuseppe; Alimohammadi, Mohammad; Öberg, Kjell; Giandomenico, Valeria

2010-12-30

Small intestine neuroendocrine tumors (SI-NETs) belong to a rare group of cancers. Most patients have developed metastatic disease at the time of diagnosis, for which there is currently no cure. The delay in diagnosis is a major issue in the clinical management of the patients and new markers are urgently needed. We have previously identified paraneoplastic antigen Ma2 (PNMA2) as a novel SI-NET tissue biomarker. Therefore, we evaluated whether Ma2 autoantibodies detection in the blood stream is useful for the clinical diagnosis and recurrence of SI-NETs. A novel indirect ELISA was set up to detect Ma2 autoantibodies in blood samples of patients with SI-NET at different stages of disease. The analysis was extended to include typical and atypical lung carcinoids (TLC and ALC), to evaluate whether Ma2 autoantibodies in the blood stream become a general biomarker for NETs. In total, 124 blood samples of SI-NET patients at different stages of disease were included in the study. The novel Ma2 autoantibody ELISA showed high sensitivity, specificity and accuracy with ROC curve analysis underlying an area between 0.734 and 0.816. Ma2 autoantibodies in the blood from SI-NET patients were verified by western blot and sequential immunoprecipitation. Serum antibodies of patients stain Ma2 in the tumor tissue and neurons. We observed that SI-NET patients expressing Ma2 autoantibody levels below the cutoff had a longer progression and recurrence-free survival compared to those with higher titer. We also detected higher levels of Ma2 autoantibodies in blood samples from TLC and ALC patients than from healthy controls, as previously shown in small cell lung carcinoma samples. Here we show that high Ma2 autoantibody titer in the blood of SI-NET patients is a sensitive and specific biomarker, superior to chromogranin A (CgA) for the risk of recurrence after radical operation of these tumors.

Understanding the sources and effects of abandoned, lost, and discarded fishing gear on marine turtles in northern Australia.

PubMed

Wilcox, Chris; Heathcote, Grace; Goldberg, Jennifer; Gunn, Riki; Peel, David; Hardesty, Britta Denise

2015-02-01

Globally, 6.4 million tons of fishing gear are lost in the oceans annually. This gear (i.e., ghost nets), whether accidently lost, abandoned, or deliberately discarded, threatens marine wildlife as it drifts with prevailing currents and continues to entangle marine organisms indiscriminately. Northern Australia has some of the highest densities of ghost nets in the world, with up to 3 tons washing ashore per kilometer of shoreline annually. This region supports globally significant populations of internationally threatened marine fauna, including 6 of the 7 extant marine turtles. We examined the threat ghost nets pose to marine turtles and assessed whether nets associated with particular fisheries are linked with turtle entanglement by analyzing the capture rates of turtles and potential source fisheries from nearly 9000 nets found on Australia's northern coast. Nets with relatively larger mesh and smaller twine sizes (e.g., pelagic drift nets) had the highest probability of entanglement for marine turtles. Net size was important; larger nets appeared to attract turtles, which further increased their catch rates. Our results point to issues with trawl and drift-net fisheries, the former due to the large number of nets and fragments found and the latter due to the very high catch rates resulting from the net design. Catch rates for fine-mesh gill nets can reach as high as 4 turtles/100 m of net length. We estimated that the total number of turtles caught by the 8690 ghost nets we sampled was between 4866 and 14,600, assuming nets drift for 1 year. Ghost nets continue to accumulate on Australia's northern shore due to both legal and illegal fishing; over 13,000 nets have been removed since 2005. This is an important and ongoing transboundary threat to biodiversity in the region that requires attention from the countries surrounding the Arafura and Timor Seas. © 2014 Society for Conservation Biology.

Impact of Icebergs on Net Primary Productivity in the Southern Ocean

NASA Astrophysics Data System (ADS)

Wu, Shuang-Ye; Hou, Shugui

2017-04-01

Productivity in the Southern Ocean (SO) is iron-limited, and supply of iron dissolved from aeolian dust is believed to be the main source from outside the marine environment. However, recent studies show that icebergs could provide comparable amount of bioavailable iron to the SO as aeolian dust. In addition, small scale areal studies suggest increased concentrations of chlorophyll, krill, and seabirds surrounding icebergs. Based on previous research, this study aims to examine whether iceberg occurrence has a significant impact on marine productivity at the scale of the SO, using remote sensing data of iceberg occurrences and ocean net primary productivity (NPP) covering the period 2002-2014. The impacts of both large and small icebergs are examined in four major ecological zones of the SO: the continental shelf zone (CSZ), the seasonal ice zone (SIZ), the permanent open ocean zone (POOZ) and the polar front zone (PFZ). We found that both large and small icebergs have an observable positive impact on NPP, but their impacts vary in different zones. Small icebergs on average increase NPP in most iron deficient zones: by 21% for the SIZ, 16% for the POOZ, and 12% for the PFZ, but have relatively small effect in the CSZ where iron is supplied from melt water and sediment input from the continent. Large icebergs on average increase the NPP by about 10%. Their impacts are stronger at higher latitudes, where they are more concentrated. From 1992-2014, there is a significant increasing trend for both small and large icebergs. The increase was most rapid in the early 2000s, and has levelled off since then. As the climate continues to warm, the Antarctic Ice Sheet is expected to experience increased mass loss as a whole, which could lead to more icebergs in the region. Based on our study, this could result in higher level of NPP in the SO as a whole, providing a negative feedback for global warming.

NetMOD Version 2.0 Parameters

DOE Office of Scientific and Technical Information (OSTI.GOV)

Merchant, Bion J.

2015-08-01

NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydroacoustic and infrasonic networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each ofmore » the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This document describes the parameters that are used to configure the NetMOD tool and the input and output parameters that make up the simulation definitions.« less

Small town health care safety nets: report on a pilot study.

PubMed

Taylor, Pat; Blewett, Lynn; Brasure, Michelle; Call, Kathleen Thiede; Larson, Eric; Gale, John; Hagopian, Amy; Hart, L Gary; Hartley, David; House, Peter; James, Mary Katherine; Ricketts, Thomas

2003-01-01

Very little is known about the health care safety net in small towns, especially in towns where there is no publicly subsidized safety-net health care. This pilot study of the primary care safety net in 7 such communities was conducted to start building knowledge about the rural safety net. Interviews were conducted and secondary data collected to assess the community need for safety-net care, the health care safety-net role of public officials, and the availability of safety-net care at private primary care practices and its financial impact on these practices. An estimated 20% to 40% of the people in these communities were inadequately insured and needed access to affordable health care, and private primary care practices in most towns played an important role in making primary care available to them. Most of the physician practices were owned or subsidized by a hospital or regional network, though not explicitly to provide charity care. It is likely this ownership or support enabled the practices to sustain a higher level of charity care than would have been possible otherwise. In the majority of communities studied, the leading public officials played no role in ensuring access to safety-net care. State and national government policy makers should consider subsidy programs for private primary care practices that attempt to meet the needs of the inadequately insured in the many rural communities where no publicly subsidized primary safety-net care is available. Subsidies should be directed to physicians in primary care shortage areas who provide safety-net care; this will improve safety-net access and, at the same time, improve physician retention by bolstering physician incomes. Options include enhanced Medicare physician bonuses and grants or tax credits to support income-related sliding fee scales.

Agricultural peatland restoration: effects of land-use change on greenhouse gas (CO2 and CH4) fluxes in the Sacramento-San Joaquin Delta.

PubMed

Knox, Sara Helen; Sturtevant, Cove; Matthes, Jaclyn Hatala; Koteen, Laurie; Verfaillie, Joseph; Baldocchi, Dennis

2015-02-01

Agricultural drainage of organic soils has resulted in vast soil subsidence and contributed to increased atmospheric carbon dioxide (CO2) concentrations. The Sacramento-San Joaquin Delta in California was drained over a century ago for agriculture and human settlement and has since experienced subsidence rates that are among the highest in the world. It is recognized that drained agriculture in the Delta is unsustainable in the long-term, and to help reverse subsidence and capture carbon (C) there is an interest in restoring drained agricultural land-use types to flooded conditions. However, flooding may increase methane (CH4) emissions. We conducted a full year of simultaneous eddy covariance measurements at two conventional drained agricultural peatlands (a pasture and a corn field) and three flooded land-use types (a rice paddy and two restored wetlands) to assess the impact of drained to flooded land-use change on CO2 and CH4 fluxes in the Delta. We found that the drained sites were net C and greenhouse gas (GHG) sources, releasing up to 341 g C m(-2) yr(-1) as CO2 and 11.4 g C m(-2) yr(-1) as CH4. Conversely, the restored wetlands were net sinks of atmospheric CO2, sequestering up to 397 g C m(-2) yr(-1). However, they were large sources of CH4, with emissions ranging from 39 to 53 g C m(-2) yr(-1). In terms of the full GHG budget, the restored wetlands could be either GHG sources or sinks. Although the rice paddy was a small atmospheric CO2 sink, when considering harvest and CH4 emissions, it acted as both a C and GHG source. Annual photosynthesis was similar between sites, but flooding at the restored sites inhibited ecosystem respiration, making them net CO2 sinks. This study suggests that converting drained agricultural peat soils to flooded land-use types can help reduce or reverse soil subsidence and reduce GHG emissions. © 2014 John Wiley & Sons Ltd.

The Scenario Analysis Tool Suite: A User’s Guide

DTIC Science & Technology

2009-01-01

be exported at any stage and continued manually. The free, open-source integrated development environment (IDE) NetBeans [14] was used in the creation...and Technology Organisation, Australia. 14. Sun Microsystems & CollabNet (2008) NetBeans IDE 6.0, http://wwwnetbeans.org. 15. Tri, N., Boswell, S

What Students Produce from the Net: Assessing Their Work.

ERIC Educational Resources Information Center

1996

Two papers that examine how to assess students' work in this age of electronic information sources include: "Students on the Net: Enhancing Learning through Authentic Assessment" (James Henri); and "Assessing Students' Work from the Net: An Impossible Dream?" (Paul Lupton) The first paper notes the problem of parents doing…

Economic approach to assess the forest carbon implications of biomass energy.

PubMed

Daigneault, Adam; Sohngen, Brent; Sedjo, Roger

2012-06-05

There is widespread concern that biomass energy policy that promotes forests as a supply source will cause net carbon emissions. Most of the analyses that have been done to date, however, are biological, ignoring the effects of market adaptations through substitution, net imports, and timber investments. This paper uses a dynamic model of forest and land use management to estimate the impact of United States energy policies that emphasize the utilization of forest biomass on global timber production and carbon stocks over the next 50 years. We show that when market factors are included in the analysis, expanded demand for biomass energy increases timber prices and harvests, but reduces net global carbon emissions because higher wood prices lead to new investments in forest stocks. Estimates are sensitive to assumptions about whether harvest residues and new forestland can be used for biomass energy and the demand for biomass. Restricting biomass energy to being sourced only from roundwood on existing forestland can transform the policy from a net sink to a net source of emissions. These results illustrate the importance of capturing market adjustments and a large geographic scope when measuring the carbon implications of biomass energy policies.

Net Zero Fort Carson: Integrating Energy, Water, and Waste Strategies to Lower the Environmental Impact of a Military Base

EPA Science Inventory

Military bases resemble small cities and face similar sustainability challenges. As pilot studies in the U.S. Army Net Zero program, 17 locations are moving to 100% renewable energy, zero depletion of water resources, and/or zero waste to landfill by 2020. Some bases target net z...

NetCooperate: a network-based tool for inferring host-microbe and microbe-microbe cooperation.

PubMed

Levy, Roie; Carr, Rogan; Kreimer, Anat; Freilich, Shiri; Borenstein, Elhanan

2015-05-17

Host-microbe and microbe-microbe interactions are often governed by the complex exchange of metabolites. Such interactions play a key role in determining the way pathogenic and commensal species impact their host and in the assembly of complex microbial communities. Recently, several studies have demonstrated how such interactions are reflected in the organization of the metabolic networks of the interacting species, and introduced various graph theory-based methods to predict host-microbe and microbe-microbe interactions directly from network topology. Using these methods, such studies have revealed evolutionary and ecological processes that shape species interactions and community assembly, highlighting the potential of this reverse-ecology research paradigm. NetCooperate is a web-based tool and a software package for determining host-microbe and microbe-microbe cooperative potential. It specifically calculates two previously developed and validated metrics for species interaction: the Biosynthetic Support Score which quantifies the ability of a host species to supply the nutritional requirements of a parasitic or a commensal species, and the Metabolic Complementarity Index which quantifies the complementarity of a pair of microbial organisms' niches. NetCooperate takes as input a pair of metabolic networks, and returns the pairwise metrics as well as a list of potential syntrophic metabolic compounds. The Biosynthetic Support Score and Metabolic Complementarity Index provide insight into host-microbe and microbe-microbe metabolic interactions. NetCooperate determines these interaction indices from metabolic network topology, and can be used for small- or large-scale analyses. NetCooperate is provided as both a web-based tool and an open-source Python module; both are freely available online at http://elbo.gs.washington.edu/software_netcooperate.html.

Effects of a clear-cut harvest on soil respiration in a jack pine - Lichen woodland

USGS Publications Warehouse

Striegl, Robert G.; Wickland, K.P.

1998-01-01

Quantification of the components of ecosystem respiration is essential to understanding carbon (C) cycling of natural and disturbed landscapes. Soil respiration, which includes autotrophic and heterotrophic respiration from throughout the soil profile, is the second largest flux in the global carbon cycle. We measured soil respiration (soil CO2 emission) at an undisturbed mature jack pine (Pinus banksiana Lamb.) stand in Saskatchewan (old jack pine, OJP), and at a formerly continuous portion of the stand that was clear-cut during the previous winter (clear-cut, CC). Tree harvesting reduced soil CO2 emission from ???22.5 to ???9.1 mol CO2??m2 for the 1994 growing season. OJP was a small net sink of atmospheric CO2, while CC was a net source of CO2. Winter emissions were similar at both sites. Reduction of soil respiration was attributed to disruption of the soil surface and to the death of tree roots. Flux simulations for CC and OJP identify 40% of CO2 emission at the undisturbed OJP site as near-surface respiration, 25% as deep-soil respiration, and 35% as tree-root respiration. The near-surface component was larger than the estimated annual C input to soil, suggesting fast C turnover and no net C accumulation in these boreal uplands in 1994.

A comparison of shoreline seines with fyke nets for sampling littoral fish communities in floodplain lakes

USGS Publications Warehouse

Clark, S.J.; Jackson, J.R.; Lochmann, S.E.

2007-01-01

We compared shoreline seines with fyke nets in terms of their ability to sample fish species in the littoral zone of 22 floodplain lakes of the White River, Arkansas. Lakes ranged in size from less than 0.5 to 51.0 ha. Most contained large amounts of coarse woody debris within the littoral zone, thus making seining in shallow areas difficult. We sampled large lakes (>2 ha) using three fyke nets; small lakes (<2 ha) were sampled using two fyke nets. Fyke nets were set for 24 h. Large lakes were sampled with an average of 11 seine hauls/ lake and small lakes were sampled with an average of 3 seine hauls/lake, but exact shoreline seining effort varied among lakes depending on the amount of open shoreline. Fyke nets collected more fish and produced greater species richness and diversity measures than did seining. Species evenness was similar for the two gear types. Two species were unique to seine samples, whereas 13 species and 3 families were unique to fyke-net samples. Although fyke nets collected more fish and more species than did shoreline seines, neither gear collected all the species present in the littoral zone of floodplain lakes. These results confirm the need for a multiple-gear approach to fully characterize the littoral fish assemblages in floodplain lakes. ?? Copyright by the American Fisheries Society 2007.

Land Use Effects on Net Greenhouse Gas Fluxes in the US Great Plains: Historical Trends and Model Projections

NASA Astrophysics Data System (ADS)

Del Grosso, S. J.; Parton, W. J.; Ojima, D. S.; Mosier, A. R.; Mosier, A. R.; Paustian, K.; Peterson, G. A.

2001-12-01

We present maps showing regional patterns of land use change and soil C levels in the US Great Plains during the 20th century and time series of net greenhouse gas fluxes associated with different land uses. Net greenhouse gas fluxes were calculated by accounting for soil CO2 fluxes, the CO2 equivalents of N2O emissions and CH4 uptake, and the CO2 costs of N fertilizer production. Both historical and modern agriculture in this region have been net sources of greenhouse gases. The primary reason for this, prior to 1950, is that agriculture mined soil C and resulted in net CO2 emissions. When chemical N fertilizer became widely used in the 1950's agricultural soils began to sequester CO2-C but these soils were still net greenhouse gas sources if the effects of increased N2O emissions and decreased CH4 uptake are included. The sensitivity of net greenhouse gas fluxes to conventional and alternative land uses was explored using the DAYCENT ecosystem model. Model projections suggest that conversion to no-till, reduction of the fallow period, and use of nitrification inhibitors can significantly decrease net greenhouse gas emissions in dryland and irrigated systems, while maintaining or increasing crop yields.

26 CFR 1.904(g)-3 - Ordering rules for the allocation of net operating losses, net capital losses, U.S. source losses...

Code of Federal Regulations, 2012 CFR

2012-04-01

... of separate limitation losses, overall foreign losses, and overall domestic losses. 1.904(g)-3 Section 1.904(g)-3 Internal Revenue INTERNAL REVENUE SERVICE, DEPARTMENT OF THE TREASURY (CONTINUED) INCOME TAX (CONTINUED) INCOME TAXES (CONTINUED) Income from Sources Without the United States § 1.904(g...

26 CFR 1.904(g)-3 - Ordering rules for the allocation of net operating losses, net capital losses, U.S. source losses...

Code of Federal Regulations, 2010 CFR

2010-04-01

... of separate limitation losses, overall foreign losses, and overall domestic losses. 1.904(g)-3 Section 1.904(g)-3 Internal Revenue INTERNAL REVENUE SERVICE, DEPARTMENT OF THE TREASURY (CONTINUED) INCOME TAX (CONTINUED) INCOME TAXES Income from Sources Without the United States § 1.904(g)-3 Ordering...

26 CFR 1.904(g)-3 - Ordering rules for the allocation of net operating losses, net capital losses, U.S. source losses...

Code of Federal Regulations, 2014 CFR

2014-04-01

... recapture of separate limitation losses, overall foreign losses, and overall domestic losses. 1.904(g)-3 Section 1.904(g)-3 Internal Revenue INTERNAL REVENUE SERVICE, DEPARTMENT OF THE TREASURY (CONTINUED) INCOME TAX (CONTINUED) INCOME TAXES (CONTINUED) Income from Sources Without the United States § 1.904(g...

26 CFR 1.904(g)-3 - Ordering rules for the allocation of net operating losses, net capital losses, U.S. source losses...

Code of Federal Regulations, 2011 CFR

2011-04-01

... of separate limitation losses, overall foreign losses, and overall domestic losses. 1.904(g)-3 Section 1.904(g)-3 Internal Revenue INTERNAL REVENUE SERVICE, DEPARTMENT OF THE TREASURY (CONTINUED) INCOME TAX (CONTINUED) INCOME TAXES (CONTINUED) Income from Sources Without the United States § 1.904(g...

26 CFR 1.904(g)-3 - Ordering rules for the allocation of net operating losses, net capital losses, U.S. source losses...

Code of Federal Regulations, 2013 CFR

2013-04-01

... recapture of separate limitation losses, overall foreign losses, and overall domestic losses. 1.904(g)-3 Section 1.904(g)-3 Internal Revenue INTERNAL REVENUE SERVICE, DEPARTMENT OF THE TREASURY (CONTINUED) INCOME TAX (CONTINUED) INCOME TAXES (CONTINUED) Income from Sources Without the United States § 1.904(g...

Source sparsity control of sound field reproduction using the elastic-net and the lasso minimizers.

PubMed

Gauthier, P-A; Lecomte, P; Berry, A

2017-04-01

Sound field reproduction is aimed at the reconstruction of a sound pressure field in an extended area using dense loudspeaker arrays. In some circumstances, sound field reproduction is targeted at the reproduction of a sound field captured using microphone arrays. Although methods and algorithms already exist to convert microphone array recordings to loudspeaker array signals, one remaining research question is how to control the spatial sparsity in the resulting loudspeaker array signals and what would be the resulting practical advantages. Sparsity is an interesting feature for spatial audio since it can drastically reduce the number of concurrently active reproduction sources and, therefore, increase the spatial contrast of the solution at the expense of a difference between the target and reproduced sound fields. In this paper, the application of the elastic-net cost function to sound field reproduction is compared to the lasso cost function. It is shown that the elastic-net can induce solution sparsity and overcomes limitations of the lasso: The elastic-net solves the non-uniqueness of the lasso solution, induces source clustering in the sparse solution, and provides a smoother solution within the activated source clusters.

STELLAR ROTATION EFFECTS IN POLARIMETRIC MICROLENSING

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sajadian, Sedighe, E-mail: sajadian@ipm.ir

2016-07-10

It is well known that the polarization signal in microlensing events of hot stars is larger than that of main-sequence stars. Most hot stars rotate rapidly around their stellar axes. The stellar rotation creates ellipticity and gravity-darkening effects that break the spherical symmetry of the source's shape and the circular symmetry of the source's surface brightness respectively. Hence, it causes a net polarization signal for the source star. This polarization signal should be considered in polarimetric microlensing of fast rotating stars. For moderately rotating stars, lensing can magnify or even characterize small polarization signals due to the stellar rotation throughmore » polarimetric observations. The gravity-darkening effect due to a rotating source star creates asymmetric perturbations in polarimetric and photometric microlensing curves whose maximum occurs when the lens trajectory crosses the projected position of the rotation pole on the sky plane. The stellar ellipticity creates a time shift (i) in the position of the second peak of the polarimetric curves in transit microlensing events and (ii) in the peak position of the polarimetric curves with respect to the photometric peak position in bypass microlensing events. By measuring this time shift via polarimetric observations of microlensing events, we can evaluate the ellipticity of the projected source surface on the sky plane. Given the characterizations of the FOcal Reducer and low dispersion Spectrograph (FORS2) polarimeter at the Very Large Telescope, the probability of observing this time shift is very small. The more accurate polarimeters of the next generation may well measure these time shifts and evaluate the ellipticity of microlensing source stars.« less

NetMOD Version 2.0 Mathematical Framework

DOE Office of Scientific and Technical Information (OSTI.GOV)

Merchant, Bion J.; Young, Christopher J.; Chael, Eric P.

2015-08-01

NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydroacoustic and infrasonic networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed at each ofmore » the stations. From these signal-to-noise ratios (SNR), the probabilities of signal detection at each station and event detection across the network of stations can be computed given a detection threshold. The purpose of this document is to clearly and comprehensively present the mathematical framework used by NetMOD, the software package developed by Sandia National Laboratories to assess the monitoring capability of ground-based sensor networks. Many of the NetMOD equations used for simulations are inherited from the NetSim network capability assessment package developed in the late 1980s by SAIC (Sereno et al., 1990).« less

NetMOD version 1.0 user's manual

DOE Office of Scientific and Technical Information (OSTI.GOV)

Merchant, Bion John

2014-01-01

NetMOD (Network Monitoring for Optimal Detection) is a Java-based software package for conducting simulation of seismic networks. Specifically, NetMOD simulates the detection capabilities of seismic monitoring networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes of signal and noise that are observed atmore » each of the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This manual describes how to configure and operate NetMOD to perform seismic detection simulations. In addition, NetMOD is distributed with a simulation dataset for the Comprehensive Nuclear-Test-Ban Treaty Organization (CTBTO) International Monitoring System (IMS) seismic network for the purpose of demonstrating NetMOD's capabilities and providing user training. The tutorial sections of this manual use this dataset when describing how to perform the steps involved when running a simulation.« less

Gas slug ascent through changes in conduit diameter: Laboratory insights into a volcano-seismic source process in low-viscosity magmas

USGS Publications Warehouse

James, M.R.; Lane, S.J.; Chouet, B.A.

2006-01-01

Seismic signals generated during the flow and degassing of low-viscosity magmas include long-period (LP) and very-long-period (VLP) events, whose sources are often attributed to dynamic fluid processes within the conduit. We present the results of laboratory experiments designed to investigate whether the passage of a gas slug through regions of changing conduit diameter could act as a suitable source mechanism. A vertical, liquid-filled glass tube featuring a concentric diameter change was used to provide canonical insights into potentially deep or shallow seismic sources. As gas slugs ascend the tube, we observe systematic pressure changes varying with slug size, liquid depth, tube diameter, and liquid viscosity. Gas slugs undergoing an abrupt flow pattern change upon entering a section of significantly increased tube diameter induce a transient pressure decrease in and above the flare and an associated pressure increase below it, which stimulates acoustic and inertial resonant oscillations. When the liquid flow is not dominantly controlled by viscosity, net vertical forces on the apparatus are also detected. The net force is a function of the magnitude of the pressure transients generated and the tube geometry, which dictates where, and hence when, the traveling pressure pulses can couple into the tube. In contrast to interpretations of related volcano-seismic data, where a single downward force is assumed to result from an upward acceleration of the center of mass in the conduit, our experiments suggest that significant downward forces can result from the rapid deceleration of relatively small volumes of downward-moving liquid. Copyright 2006 by the American Geophysical Union.

Net global warming potential and greenhouse gas intensity influenced by irrigation, tillage, crop rotation, and nitrogen fertilization

USDA-ARS?s Scientific Manuscript database

Little information exists about sources and sinks of greenhouse gases (GHGs) affected by management practices to account for net emissions from agroecosystems. We evaluated the effects of irrigation, tillage, crop rotation, and N fertilization on net global warming potential (GWP) and greenhouse gas...

Crystallographic texture in oxide-dispersion-strengthened alloys

NASA Technical Reports Server (NTRS)

Whittenberger, J. D.

1982-01-01

Crystallographic and elastic moduli data are presented which document the degree of texture in several oxide dispersion-strengthened (ODS) nickel-base alloys. The existence of strong crystallographic textures in such multicrystalline alloys is considered important, since the small angle grain boundaries may be partially responsible for creep threshold stresses. Gleiter (1979) has shown that ideal, low energy boundaries will act as vacancy sources only when the applied stress is greater than a threshold stress, while large angle grain boundaries will emit vacancies at all stress levels. The continued operation of a net vacancy in an ODS alloy must be avoided, since it will lead to a localized disruption of the microstructure.

Cross-Cultural Adjustment of Native-Speaking English Teachers (NETs) in Hong Kong: A Factor in Attrition and Retention

ERIC Educational Resources Information Center

Chu, Chau Kan; Morrison, Keith

2011-01-01

This paper argues that, despite government support in financial and contractual matters, ongoing problems of retention of Native-speaking English Teachers (NETs) in Hong Kong stem, in part, from problems of cross-cultural adjustment. The paper reports a small-scale qualitative investigation into the experiences of NETS in Hong Kong and finds…

Numerical study on the maximum small-signal gain coefficient in passively mode-locked fiber lasers

NASA Astrophysics Data System (ADS)

Tang, Xin; Wang, Jian; Chen, Zhaoyang; Lin, Chengyou; Ding, Yingchun

2017-06-01

Ultrashort pulses have been found to have important applications in many fields, such as ultrafast diagnosis, biomedical engineering, and optical imaging. Passively mode-locked fiber lasers have become a tool for generating picosecond and femtosecond pulses. In this paper, the evolution of a picosecond laser pulse in different stable passively mode-locked fiber laser is analyzed using nonlinear Schrödinger equation. Firstly, different mode-locked regimes are calculated with different net cavity dispersion (from -0.3 ps2 to +0.3 ps2 ). Then we calculate the maximum small-signal gain on the different net cavity dispersion conditions, and estimate the pulse width, 3 dB bandwidth and time bandwidth product (TBP) when the small-signal gain coefficient is selected as the maximum value. The results show that the small signal gain coefficient is approximately proportional to the net cavity. Moreover, when the small signal gain coefficient reaches the maximum value, the pulse width of the output pulse and their corresponding TBP show a trend of increase gradually, and 3dB bandwidth shows a trend of increase firstly and then decrease. In addition, in the case that the net dispersion is positive, because of the pulse with quite large frequency chirp, the revolution to dechirp the pulse is researched and the output of the pulse is compressed and its compression ratio reached more than 10 times. The results provide a reference for the optimization of passively mode-locked fiber lasers.

EPICS SCA CLIENTS ON THE .NET X64 PLATFORM

DOE Office of Scientific and Technical Information (OSTI.GOV)

Timossi, Chris; Nishimura, Hiroshi

2006-10-19

We have developed a .NET assembly, which we call SCA.NET,which we have been using for building EPICS based control roomapplications at the Advanced Light Source (ALS). In this paper we reporton our experiences building a 64-bit version of SCA.NET and theunderlying channel access libraries for Windows XP x64 (using a dual coreAMD Athlon CPU). We also report on our progress in building newaccelerator control applications for this environment.

The Importance of Artificial Intelligence for Naval Intelligence Training Simulations

DTIC Science & Technology

2006-09-01

experimental investigation described later. B. SYSTEM ARCHITECTURE The game-based simulator was created using NetBeans , which is an open source integrated...development environment (IDE) written entirely in Java using the NetBeans Platform. NetBeans is based upon the Java language which contains the...involved within the simulation are conducted in a GUI built within the NetBeans IDE. The opening display allows the user to setup the simulation

Cyber Situational Awareness through Operational Streaming Analysis

DTIC Science & Technology

2011-04-07

Our system makes use of two specific data sources from network traffic: raw packet data and NetFlow connection summary records (de- scribed below...implemented an operational prototype system using the following two data feeds. a) NetFlow Data: Our system processes the NetFlow records of all...Internet gateway traffic for a large enterprise network. It uses the standard Cisco NetFlow version 5 proto- col, which defines a flow as a

Popularity of Russian information sources of medical education.

PubMed

Vasilyeva, Irina V; Arseniev, Sergey B

2014-01-01

The aim of the present study is to analyze the popularity of information sources of medical educational sites <webmedinfo.ru>, medical information portal <meduniver.com>, medical portal for students <6years.net>, electronic library of medical literature <booksmed.com>, <medliter.ru> and <medbook.net.ru>. Three sites (<www.webmedinfo.ru>, <meduniver.com> and <6years.net>) provide sources of medical literature, educational videos, medical histories, medical papers and medical popular literature. And three other sites (<www.booksmed.com>, <www.medliter.ru> and <www.medbook.net.ru>) provide sources for electronic medical books on various subjects. Using on-line programs Alexa and Cy-pr we have analyzed the website's rating and identified the main data and time-varying data of the sites. Calculated Alexa Rank rating was determined for each site. Our study has shown that the most popular information sources of medical education among the six studied sites for Russian users is <meduniver.com>; the site <booksmed.com> is at the second place referring to the Alexa Rank rating and the site <webmedinfo.ru> is at the second place referring to the citation index in Yandex. The most popular medical site of electronic medical books is <booksmed.com>.

Does deep ocean mixing drive upwelling or downwelling of abyssal waters?

NASA Astrophysics Data System (ADS)

Ferrari, R. M.; McDougall, T. J.; Mashayek, A.; Nikurashin, M.; Campin, J. M.

2016-02-01

It is generally understood that small-scale mixing, such as is caused by breaking internal waves, drives upwelling of the densest ocean waters that sink to the ocean bottom at high latitudes. However the observational evidence that the turbulent fluxes generated by small-scale mixing in the stratified ocean interior are more vigorous close to the ocean bottom than above implies that small-scale mixing converts light waters into denser ones, thus driving a net sinking of abyssal water. Using a combination of numerical models and observations, it will be shown that abyssal waters return to the surface along weakly stratified boundary layers, where the small-scale mixing of density decays to zero. The net ocean meridional overturning circulation is thus the small residual of a large sinking of waters, driven by small-scale mixing in the stratified interior, and a comparably large upwelling, driven by the reduced small-scale mixing along the ocean boundaries.

Career Guidance in India Based on O*NET and Cultural Variables

ERIC Educational Resources Information Center

Bhatnagar, Mohit

2018-01-01

The Occupational Information Network (O*NET) is the primary source of occupational information in the United States (US). In this study, I review O*NET's usage for career guidance in India and conceive a career intervention based on it. In an empirical evaluation adopting a posttest-only experimental design with post-graduate management students…

Paraneoplastic Antigen Ma2 Autoantibodies as Specific Blood Biomarkers for Detection of Early Recurrence of Small Intestine Neuroendocrine Tumors

PubMed Central

Cui, Tao; Hurtig, Monica; Elgue, Graciela; Li, Su-Chen; Veronesi, Giulia; Essaghir, Ahmed; Demoulin, Jean-Baptiste; Pelosi, Giuseppe; Alimohammadi, Mohammad; Öberg, Kjell; Giandomenico, Valeria

2010-01-01

Background Small intestine neuroendocrine tumors (SI-NETs) belong to a rare group of cancers. Most patients have developed metastatic disease at the time of diagnosis, for which there is currently no cure. The delay in diagnosis is a major issue in the clinical management of the patients and new markers are urgently needed. We have previously identified paraneoplastic antigen Ma2 (PNMA2) as a novel SI-NET tissue biomarker. Therefore, we evaluated whether Ma2 autoantibodies detection in the blood stream is useful for the clinical diagnosis and recurrence of SI-NETs. Methodology/Principal Findings A novel indirect ELISA was set up to detect Ma2 autoantibodies in blood samples of patients with SI-NET at different stages of disease. The analysis was extended to include typical and atypical lung carcinoids (TLC and ALC), to evaluate whether Ma2 autoantibodies in the blood stream become a general biomarker for NETs. In total, 124 blood samples of SI-NET patients at different stages of disease were included in the study. The novel Ma2 autoantibody ELISA showed high sensitivity, specificity and accuracy with ROC curve analysis underlying an area between 0.734 and 0.816. Ma2 autoantibodies in the blood from SI-NET patients were verified by western blot and sequential immunoprecipitation. Serum antibodies of patients stain Ma2 in the tumor tissue and neurons. We observed that SI-NET patients expressing Ma2 autoantibody levels below the cutoff had a longer progression and recurrence-free survival compared to those with higher titer. We also detected higher levels of Ma2 autoantibodies in blood samples from TLC and ALC patients than from healthy controls, as previously shown in small cell lung carcinoma samples. Conclusion Here we show that high Ma2 autoantibody titer in the blood of SI-NET patients is a sensitive and specific biomarker, superior to chromogranin A (CgA) for the risk of recurrence after radical operation of these tumors. PMID:21209860

Incidence and survival patterns of rare anal canal neoplasms using the surveillance epidemiology and end results registry.

PubMed

Metildi, Cristina; McLemore, Elisabeth C; Tran, Thuy; Chang, David; Cosman, Bard; Ramamoorthy, Sonia L; Saltzstein, Sidney L; Sadler, Georgia Robins

2013-10-01

Small cell, neuroendocrine tumors, and melanoma of the anus are rare. Limited data exist on the incidence and management for these rare tumors. A large, prospective, population-based database was used to determine incidence and survival patterns of rare anal neoplasms. The Surveillance, Epidemiology and End Results registry was queried to identify patients diagnosed with anal canal neoplasms. Incidence and survival patterns were evaluated with respect to age, sex, race, histology, stage, and therapy. We identified 7078 cases of anal canal neoplasms: melanoma (n = 149), neuroendocrine (n = 61), and small cell neuroendocrine (n = 26). Squamous cell carcinoma (SCC) (n = 6842) served as the comparison group. Anal melanoma (AM) demonstrated the lowest survival rate at 2.5 per cent. Neuroendocrine tumors (NETs) demonstrated similar survival as SCC (10-year survival for regional disease of 25 and 22.3%, respectively). Ten-year survival of small cell NETs resembled AM (5.3 vs 2.5%). Age 60 years or older, sex, black race, stage, and surgery were independent predictors of survival. This study presents the largest patient series of rare anal neoplasms. NETs of the anal canal demonstrate similar survival patterns to SCC, whereas small cell NETs more closely resemble AM. Accurate histologic diagnosis is vital to determine treatment and surgical management because survival patterns can differ among rare anal neoplasms.

Establishment and characterization of a goat synovial membrane cell line susceptible to small ruminant lentivirus infection.

PubMed

Rolland, Morgane; Chauvineau, Cécile; Valas, Stephen; Mamoun, Robert Z; Perrin, Gérard

2004-06-15

Primary goat synovial membrane (GSM) cells are widely used to study small ruminant lentiviruses (SRLV), i.e. maedi visna virus (MVV) and caprine arthritis-encephalitis virus (CAEV), but their limited life-span of 15-20 passages in vitro is problematic. Here, we report that ectopic expression of the catalytic subunit of human telomerase (hTERT) was sufficient to immortalize primary GSM cells. Cultures of hTERT-transfected GSM cells have been passaged for 2 years without showing any phenotypic difference from the original primary GSM cells. The hTERT-transfected cells continued to grow beyond a population doubling number of 250, while no net telomere lengthening was observed for these cells. Moreover, the immortalized GSM cells were susceptible to infection by both CAEV and MVV and were able to propagate theses viruses. Such cell line provides a useful source of standard and robust cells for both research and veterinary purposes.

Cyber Defence in the Armed Forces of the Czech Republic

DTIC Science & Technology

2010-11-01

undesirable action backward discovery. This solution is based on special tools using NetFlow protocol. Active network elements or specialized hardware...probes attached to the backbone network using a tap can be the sources of NetFlow data. The principal advantage of NetFlow protocol is the fact that it...provides primary data in the open form, which can be easily utilized in the subsequent operations. The FlowMon Probe 4000 is mostly used NetFlow

NetMOD Version 2.0 User?s Manual.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Merchant, Bion J.

2015-10-01

NetMOD ( Net work M onitoring for O ptimal D etection) is a Java-based software package for conducting simulation of seismic, hydracoustic, and infrasonic networks. Specifically, NetMOD simulates the detection capabilities of monitoring networks. Network simulations have long been used to study network resilience to station outages and to determine where additional stations are needed to reduce monitoring thresholds. NetMOD makes use of geophysical models to determine the source characteristics, signal attenuation along the path between the source and station, and the performance and noise properties of the station. These geophysical models are combined to simulate the relative amplitudes ofmore » signal and noise that are observed at each of the stations. From these signal-to-noise ratios (SNR), the probability of detection can be computed given a detection threshold. This manual describes how to configure and operate NetMOD to perform detection simulations. In addition, NetMOD is distributed with simulation datasets for the Comprehensive Nuclear-Test-Ban Treaty Organization (CTBTO) International Monitoring System (IMS) seismic, hydroacoustic, and infrasonic networks for the purpose of demonstrating NetMOD's capabilities and providing user training. The tutorial sections of this manual use this dataset when describing how to perform the steps involved when running a simulation. ACKNOWLEDGEMENTS We would like to thank the reviewers of this document for their contributions.« less

Shuttle Net, Tuna Net

NASA Technical Reports Server (NTRS)

1983-01-01

Rockwell International, NASA's prime contractor for the Space Shuttle, asked West Coast Netting (WCN) to develop a safety net for personnel working on the Shuttle Orbiter. This could not be an ordinary net, it had to be relatively small, yet have extraordinary tensile strength. It also had to be fire resistant and resistant to ultraviolet (UV) light. After six months, WCN found the requisite fiber, a polyester-like material called NOMEX. The company was forced to invent a more sophisticated twisting process since conventional methods did not approach specified breaking strength. The resulting product, the Hyperester net, sinks faster and fishes deeper, making it attractive to fishing fleets. A patented treatment for UV protection and greater abrasion resistance make Hyperester nets last longer, and the no-shrink feature is an economic bonus.

Carbon Dynamics of Bioenergy Cropping Systems Compared to Conventional Cotton Cropping Systems in the Southern Cotton Belt Region of the U.S.

NASA Astrophysics Data System (ADS)

Rajan, N.; Sharma, S.; Casey, K.; Maas, S. J.

2015-12-01

We are facing an unprecedented challenge in securing America's energy future. To address this challenge, increased biofuel crop production is needed. Second-generation biofuels are made from the by-products of intensive agriculture or from less-intensive agriculture on more marginal lands. The Southwestern U.S. Cotton Belt can play a significant role in this effort through a change from more conventional crops (like continuous cotton) to second-generation biofuel feedstocks (biomass sorghum and perennial grasses). We have established eddy covariance flux towers in producer fields in the Southern High Plains region. Among the four land uses compared, the net carbon uptake was the highest for the biomass sorghum field. During the year 2014, the biomass sorghum field gained approximately 672 gC m-2y-1. The next highest carbon uptake was recorded for the Old World Bluestem grass field, which was approximately 301 gC m-2y-1. The dominant land use in the region is cotton. While the forage sorghum and grass fields acted as net carbon sinks, the irrigated cotton field acted as a net carbon source to the atmosphere during the same period. The irrigated cotton field exhibited a net carbon loss of approximately 246 gC m-2y-1. In contrast, the dryland cotton field acted as a net carbon sink, with a total uptake of approximately 58 g C m-2y-1. The net primary production of the irrigated cotton field was higher than that of the dryland cotton field, yet the irrigated field was a significant carbon source to the atmosphere. This was due to conventional tillage practices combined with irrigation which enhanced the ecosystem respiration significantly compared to the dryland field. In 2014, an early spring cold front caused poor germination of seeds in the majority of the cotton fields in the region, including the eddy covariance site. This site was re-planted on 9 June, which shortened the growing season for cotton. This was also a contributing factor to this field being a net carbon source. When only seasonal data were considered (i.e, from planting to harvest), the biomass sorghum field was the largest net C sink (-668 g C m-2y-1) followed by the grassland field (-298 g C m-2y-1). Among the two cotton fields, the irrigated cotton field remained a net carbon source (38 g C m-2y-1), while the dryland field was a net carbon sink (-127 g C m-2y-1).

26 CFR 1.904(g)-3T - Ordering rules for the allocation of net operating losses, net capital losses, U.S. source losses...

Code of Federal Regulations, 2010 CFR

2010-04-01

...(g)-3T Section 1.904(g)-3T Internal Revenue INTERNAL REVENUE SERVICE, DEPARTMENT OF THE TREASURY (CONTINUED) INCOME TAX (CONTINUED) INCOME TAXES Income from Sources Without the United States § 1.904(g)-3T.... The rules must be applied in the order set forth in paragraphs (b) through (g) of this section. (b...

Impact of a behaviour change intervention on long-lasting insecticidal net care and repair behaviour and net condition in Nasarawa State, Nigeria.

PubMed

Koenker, Hannah; Kilian, Albert; Hunter, Gabrielle; Acosta, Angela; Scandurra, Leah; Fagbemi, Babafunke; Onyefunafoa, Emmanuel O; Fotheringham, Megan; Lynch, Matthew

2015-01-21

While some data on net durability have been accumulating in recent years, including formative qualitative research on attitudes towards net care and repair, no data are available on how the durability of a net is influenced by behaviour of net maintenance, care and repair, and whether behavioural change interventions (BCC) could substantially impact on the average useful life of the net. The study used an intervention-control design with before-after assessment through repeated cross-sectional household surveys with two-stage cluster sampling following Nasarawa State's December 2010 mass campaign. All campaign nets were 100-denier polyester, long-lasting insecticidal nets (LLIN). Baseline, midline, and endline surveys occurred at one-year intervals, in March 2012, March 2013, and April 2014, respectively. Outcome measures were the proportion of confirmed campaign nets with observed repairs, and the proportion in serviceable condition, measured with proportionate hole index (pHI) and according to WHO guidelines. For all respondents, exposure to BCC messages was strongly correlated with increased positive attitude towards care and repair, and increases in attitude were positively correlated with observed net repairs, and with the proportion of nets in serviceable condition. In a multivariate regression model, positive care and repair attitude (OR 6.17 p = 0.001) and level of exposure (1 source: OR 4.00 p = 0.000; 3 sources: OR 9.34 p = 0.000) remained the most significant predictors of net condition, controlling for background and environmental factors. Nets that were tied up had 2.70 higher odds of being in serviceable condition (p = 0.001), while repairs made to nets were not sufficient to improve their pHI category. Estimated median net lifespan was approximately one full year longer for nets in households with a positive compared to a negative attitude. Exposure to multiple channels of a comprehensive BCC intervention was associated with improved attitude scores, and with improved net condition at endline. It is possible for BCC interventions to change both attitudes and behaviours, and to have an important effect on overall median net lifespan. Care and repair messages are easily incorporated into existing malaria BCC platforms, and will help contribute to improved net condition, providing, in principle, more protection from malaria.

Scalar Potential Model progress

NASA Astrophysics Data System (ADS)

Hodge, John

2007-04-01

Because observations of galaxies and clusters have been found inconsistent with General Relativity (GR), the focus of effort in developing a Scalar Potential Model (SPM) has been on the examination of galaxies and clusters. The SPM has been found to be consistent with cluster cellular structure, the flow of IGM from spiral galaxies to elliptical galaxies, intergalactic redshift without an expanding universe, discrete redshift, rotation curve (RC) data without dark matter, asymmetric RCs, galaxy central mass, galaxy central velocity dispersion, and the Pioneer Anomaly. In addition, the SPM suggests a model of past expansion, past contraction, and current expansion of the universe. GR corresponds to the SPM in the limit in which a flat and static scalar potential field replaces the Sources and Sinks such as between clusters and on the solar system scale which is small relative to the distance to a Source. The papers may be viewed at http://web.infoave.net/˜scjh/ .

Analytical Study on Multi-Tier 5G Heterogeneous Small Cell Networks: Coverage Performance and Energy Efficiency.

PubMed

Xiao, Zhu; Liu, Hongjing; Havyarimana, Vincent; Li, Tong; Wang, Dong

2016-11-04

In this paper, we investigate the coverage performance and energy efficiency of multi-tier heterogeneous cellular networks (HetNets) which are composed of macrocells and different types of small cells, i.e., picocells and femtocells. By virtue of stochastic geometry tools, we model the multi-tier HetNets based on a Poisson point process (PPP) and analyze the Signal to Interference Ratio (SIR) via studying the cumulative interference from pico-tier and femto-tier. We then derive the analytical expressions of coverage probabilities in order to evaluate coverage performance in different tiers and investigate how it varies with the small cells' deployment density. By taking the fairness and user experience into consideration, we propose a disjoint channel allocation scheme and derive the system channel throughput for various tiers. Further, we formulate the energy efficiency optimization problem for multi-tier HetNets in terms of throughput performance and resource allocation fairness. To solve this problem, we devise a linear programming based approach to obtain the available area of the feasible solutions. System-level simulations demonstrate that the small cells' deployment density has a significant effect on the coverage performance and energy efficiency. Simulation results also reveal that there exits an optimal small cell base station (SBS) density ratio between pico-tier and femto-tier which can be applied to maximize the energy efficiency and at the same time enhance the system performance. Our findings provide guidance for the design of multi-tier HetNets for improving the coverage performance as well as the energy efficiency.

Analytical Study on Multi-Tier 5G Heterogeneous Small Cell Networks: Coverage Performance and Energy Efficiency

PubMed Central

Xiao, Zhu; Liu, Hongjing; Havyarimana, Vincent; Li, Tong; Wang, Dong

2016-01-01

In this paper, we investigate the coverage performance and energy efficiency of multi-tier heterogeneous cellular networks (HetNets) which are composed of macrocells and different types of small cells, i.e., picocells and femtocells. By virtue of stochastic geometry tools, we model the multi-tier HetNets based on a Poisson point process (PPP) and analyze the Signal to Interference Ratio (SIR) via studying the cumulative interference from pico-tier and femto-tier. We then derive the analytical expressions of coverage probabilities in order to evaluate coverage performance in different tiers and investigate how it varies with the small cells’ deployment density. By taking the fairness and user experience into consideration, we propose a disjoint channel allocation scheme and derive the system channel throughput for various tiers. Further, we formulate the energy efficiency optimization problem for multi-tier HetNets in terms of throughput performance and resource allocation fairness. To solve this problem, we devise a linear programming based approach to obtain the available area of the feasible solutions. System-level simulations demonstrate that the small cells’ deployment density has a significant effect on the coverage performance and energy efficiency. Simulation results also reveal that there exits an optimal small cell base station (SBS) density ratio between pico-tier and femto-tier which can be applied to maximize the energy efficiency and at the same time enhance the system performance. Our findings provide guidance for the design of multi-tier HetNets for improving the coverage performance as well as the energy efficiency. PMID:27827917

Horizontal convection with mechanical stirring

NASA Astrophysics Data System (ADS)

Griffiths, Ross; Stewart, Kial; Hughes, Graham

2012-11-01

The effects of turbulent mixing on convective circulation forced by a horizontal gradient of buoyancy at the surface is examined using laboratory experiments in which a salt flux is introduced at the surface, at one end of a box, and a freshwater buoyancy condition is applied over the rest of the surface. Horizontal rods are oscillated and yo-yoed continuously through the water column, providing a diffusivity that can be calibrated. The convection reaches a stationary state having zero net salt flux. We find that for small stirring rates the small but finite volume flux from the dense source is significant and a virtual source correction is required to take this into account. The density stratification and overturning volume transport are consistent with a theoretical model for high Rayleigh numbers: the transport ψ increases with diffusivity κ (ψg ~ gκ 1 / 4) . The results show that vertical mixing in the boundary layer is important, particularly in setting the density of the interior and the overturning rate. However, interior mixing is unimportant, which raises an interesting question over whether abyssal mixing rates in the ocean play any significant role in setting the abyssal ocean density or the transport in the Meridional Overturning Circulation.

Modeling of water treatment plant using timed continuous Petri nets

NASA Astrophysics Data System (ADS)

Nurul Fuady Adhalia, H.; Subiono, Adzkiya, Dieky

2017-08-01

Petri nets represent graphically certain conditions and rules. In this paper, we construct a model of the Water Treatment Plant (WTP) using timed continuous Petri nets. Specifically, we consider that (1) the water pump always active and (2) the water source is always available. After obtaining the model, the flow through the transitions and token conservation laws are calculated.

Governance in Open Source Software Development Projects: Towards a Model for Network-Centric Edge Organizations

DTIC Science & Technology

2008-06-01

project is not an isolated OSSD project. Instead, the NetBeans IDE which is the focus of development activities in the NetBeans.org project community...facilitate or constrain the intended usage of the NetBeans IDE. Figure 1 provides a rendering of some of the more visible OSSD projects that...as BioBeans and RefactorIT communities build tools on top of or extending the NetBeans platform or IDE. How do these organizations interact with

Impact of the heatwave in 2003 on the summer CH4 and N2O budget of a spruce forest ecosystem: A four-year comparison

NASA Astrophysics Data System (ADS)

Lamers, M.; Fiedler, S.; Jungkunst, H. F.; Stahr, K.; Streck, T.

2009-04-01

Both CH4 and N2O reduction and oxidation are highly sensitive to variation in soil moisture. Significant changes of net CH4 and total N2O fluxes from soils can therefore be expected to accompany redistribution for precipitation in the course of climate change where more extreme events are predicted for the future. The extreme summer drought in 2003 offered the unique opportunity to study the impact of such events on the emission of greenhouse gases, such as methane or nitrous oxide, under field conditions. The main objective of the present study was to evaluate the impact of the summer drought in 2003 on the net methane and nitrous oxide budget of a spruce forest ecosystem (South-West Germany) with large variation in soil drainage. During the summers of 2000-2004 we measured net CH4 and N2O fluxes (bi)-weekly using the closed-chamber technique for six different soil types ranging from well-aerated Cambisols to poorly drained Gleysols and a wet Histosol. With regard to CH4 the extreme summer draught (1) did not elevate net CH4-sink function of soils, but (2) highly reduced net CH4-source strength and (3) reversed the net CH4 source of the investigated catchment into a sink. In all four summers investigated, net ecosystem exchange of CH4 was found only in the hydromorphic soils but not in the dominant well-aerated soils. This highlighted the key role of hydromorphic soils for the investigated pedodiverse system. With regard to N2O the summer draught in 2003 significantly reduced N2O emissions at least for the Humic Gleysol and the Sapric Histosol and hence markedly reduced the net N2O source strength of the investigated ecosystem.

Temporally-resolved Study of Atmosphere-lake Net CO2 Exchange at Lochaber Lake, Nova Scotia, Canada

NASA Astrophysics Data System (ADS)

Spafford, L. A.; Risk, D. A.

2016-12-01

Lakes are carbon gateways with immense processing capacity, acting as either sinks or sources for CO2. As climate change exacerbates weather extremes, carbon stored within permafrost and soils is liberated to water systems, altering aquatic carbon budgets and light availability for photosynthesis. The functional response of lakes to climate change is uncertain, and continuous data of lake respiration and its drivers are lacking. This study used high-frequency measurements of CO2 exchange during a growing season by a novel technique to quantify the net flux of carbon at a small deep oligotrophic lake in eastern Nova Scotia, Canada, and to examine the influence of environmental forcings. We installed 3 floating Forced Diffusion dynamic membrane chambers on the lake, coupled to a valving multiplexer and a single Vaisala GMP 343 CO2 analyzer. This low-power system sampled lake-atmosphere CO2 exchange at several points from shore every hour for over 100 days in the growing season. At the same frequency we also collected automated measurements of wind velocity, photosynthetically active radiation (PAR), dissolved CO2, air and water temperature. Manual measurement campaigns measured chlorophyll `a', DOC, surface methane (CH4), and CO2 flux by manual static floating chamber to confirm the automated measurements. The lake was a net source for carbon, on average emitting 0.038 µmol CO2/m2/s or 4.967 g CO2/s over the entire lake, but we did observe significant temporal variation across diel cycles, and along with changing weather. Approximately 48 hours after every rain event, we observed an increase in littoral CO2 release by the lake. Wind speed, air temperature, and distance from shore were also drivers of variation, as the littoral zone tended to release less CO2 during the course of our study. This work shows the variable influence of environmental drivers of lake carbon flux, as well as the utility of low-power automated chambers for observing aquatic net CO2 exchange.

Methylmercury and other chemical constituents in Pacific coastal fog water from seven sites in Central/Northern California (FogNet) during the summer of 2014

NASA Astrophysics Data System (ADS)

Weiss-Penzias, P. S.; Heim, W. A.; Fernandez, D.; Coale, K. H.; Oliphant, A. J.; Dann, D.; Porter, M.; Hoskins, D.; Dodge, C.

2014-12-01

This project investigates the mercury content in summertime Pacific coastal fog in California and whether fog could be an important vector for ocean emissions of mercury to be deposited via fog drip to upland coastal ecosystems. Efforts began in early 2014 with the building of 7 active-strand fog collectors based on the Colorado State University Caltech CASCC design. The new UCSC CASCC includes doors sealing the collector which open under microcomputer control based on environmental sensing (relative humidity). Seven sites spanning from Trinidad in the north to Marina in the south have collected samples June-August 2014 under a project called FogNet. Fog conditions were favorable for collecting large water volumes (> 250 mL) at many sites. Fog samplers were cleaned with soap and deionized water daily and field blanks taken immediately following cleaning. Fog water samples were collected overnight, split into an aliquot for anion and DOC/DIC analysis and the remaining sample was acidified. Monomethyl mercury (MMHg) concentrations in samples and field blanks for 3 sites in FogNet are shown in the accompanying figure. The range of MMHg concentrations from 10 fog water samples > 100 mL in volume was 0.9-9.3 ng/L (4.5-46.4 pM). Elevated MMHg concentrations (> 5 ng/L, 25 pM) were observed at 2 sites: UC Santa Cruz and Bodega Bay. The field blanks produced MMHg concentrations of 0.08-0.4 ng/L (0.4-2.0 pM), which was on average < 10% of the sample concentration and suggests the artifact due to sampling was small. The observed MMHg concentrations in fog water observed is this study are 1-2 orders of magnitude greater than MMHg concentrations seen previously in rain water samples from the California coast suggesting an additional source of MMHg to fog. Shipboard measurements of dimethyl mercury (DMHg) in coastal California seawater during the time period of FogNet operations (summer 2014) reveal surface waters that were supersaturated in DMHg which represents a potential source of organic mercury to the overlying fog bank.

40 CFR 403.15 - Net/Gross calculation.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 403.15 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS GENERAL PRETREATMENT REGULATIONS FOR EXISTING AND NEW SOURCES OF POLLUTION § 403.15 Net/Gross... environmental degradation will result. [70 FR 60198, Oct. 14, 2005] ...

PhysioNet: physiologic signals, time series and related open source software for basic, clinical, and applied research.

PubMed

Moody, George B; Mark, Roger G; Goldberger, Ary L

2011-01-01

PhysioNet provides free web access to over 50 collections of recorded physiologic signals and time series, and related open-source software, in support of basic, clinical, and applied research in medicine, physiology, public health, biomedical engineering and computing, and medical instrument design and evaluation. Its three components (PhysioBank, the archive of signals; PhysioToolkit, the software library; and PhysioNetWorks, the virtual laboratory for collaborative development of future PhysioBank data collections and PhysioToolkit software components) connect researchers and students who need physiologic signals and relevant software with researchers who have data and software to share. PhysioNet's annual open engineering challenges stimulate rapid progress on unsolved or poorly solved questions of basic or clinical interest, by focusing attention on achievable solutions that can be evaluated and compared objectively using freely available reference data.

Base Station Placement Algorithm for Large-Scale LTE Heterogeneous Networks.

PubMed

Lee, Seungseob; Lee, SuKyoung; Kim, Kyungsoo; Kim, Yoon Hyuk

2015-01-01

Data traffic demands in cellular networks today are increasing at an exponential rate, giving rise to the development of heterogeneous networks (HetNets), in which small cells complement traditional macro cells by extending coverage to indoor areas. However, the deployment of small cells as parts of HetNets creates a key challenge for operators' careful network planning. In particular, massive and unplanned deployment of base stations can cause high interference, resulting in highly degrading network performance. Although different mathematical modeling and optimization methods have been used to approach various problems related to this issue, most traditional network planning models are ill-equipped to deal with HetNet-specific characteristics due to their focus on classical cellular network designs. Furthermore, increased wireless data demands have driven mobile operators to roll out large-scale networks of small long term evolution (LTE) cells. Therefore, in this paper, we aim to derive an optimum network planning algorithm for large-scale LTE HetNets. Recently, attempts have been made to apply evolutionary algorithms (EAs) to the field of radio network planning, since they are characterized as global optimization methods. Yet, EA performance often deteriorates rapidly with the growth of search space dimensionality. To overcome this limitation when designing optimum network deployments for large-scale LTE HetNets, we attempt to decompose the problem and tackle its subcomponents individually. Particularly noting that some HetNet cells have strong correlations due to inter-cell interference, we propose a correlation grouping approach in which cells are grouped together according to their mutual interference. Both the simulation and analytical results indicate that the proposed solution outperforms the random-grouping based EA as well as an EA that detects interacting variables by monitoring the changes in the objective function algorithm in terms of system throughput performance.

ChlamyNET: a Chlamydomonas gene co-expression network reveals global properties of the transcriptome and the early setup of key co-expression patterns in the green lineage.

PubMed

Romero-Campero, Francisco J; Perez-Hurtado, Ignacio; Lucas-Reina, Eva; Romero, Jose M; Valverde, Federico

2016-03-12

Chlamydomonas reinhardtii is the model organism that serves as a reference for studies in algal genomics and physiology. It is of special interest in the study of the evolution of regulatory pathways from algae to higher plants. Additionally, it has recently gained attention as a potential source for bio-fuel and bio-hydrogen production. The genome of Chlamydomonas is available, facilitating the analysis of its transcriptome by RNA-seq data. This has produced a massive amount of data that remains fragmented making necessary the application of integrative approaches based on molecular systems biology. We constructed a gene co-expression network based on RNA-seq data and developed a web-based tool, ChlamyNET, for the exploration of the Chlamydomonas transcriptome. ChlamyNET exhibits a scale-free and small world topology. Applying clustering techniques, we identified nine gene clusters that capture the structure of the transcriptome under the analyzed conditions. One of the most central clusters was shown to be involved in carbon/nitrogen metabolism and signalling, whereas one of the most peripheral clusters was involved in DNA replication and cell cycle regulation. The transcription factors and regulators in the Chlamydomonas genome have been identified in ChlamyNET. The biological processes potentially regulated by them as well as their putative transcription factor binding sites were determined. The putative light regulated transcription factors and regulators in the Chlamydomonas genome were analyzed in order to provide a case study on the use of ChlamyNET. Finally, we used an independent data set to cross-validate the predictive power of ChlamyNET. The topological properties of ChlamyNET suggest that the Chlamydomonas transcriptome posseses important characteristics related to error tolerance, vulnerability and information propagation. The central part of ChlamyNET constitutes the core of the transcriptome where most authoritative hub genes are located interconnecting key biological processes such as light response with carbon and nitrogen metabolism. Our study reveals that key elements in the regulation of carbon and nitrogen metabolism, light response and cell cycle identified in higher plants were already established in Chlamydomonas. These conserved elements are not only limited to transcription factors, regulators and their targets, but also include the cis-regulatory elements recognized by them.

Are vegetated areas of mangroves attractive to juvenile and small fish? The case of Dongzhaigang Bay, Hainan Island, China

NASA Astrophysics Data System (ADS)

Wang, Mao; Huang, Zhenyuan; Shi, Fushan; Wang, Wenqing

2009-11-01

Well-developed aerial roots of mangroves make it difficult to study how fish utilize the mangrove forest as a habitat. In the present study, we compared the differences in fish assemblages in three major types of habitats of mangrove estuary (vegetated area, treeless mudflat, and creek) of a mangrove bay in Hainan Island, China, at different seasons during two consecutive years. Three types of gears, centipede net, gill net and cast net, were used in the different habitats of mangrove estuary and sampling efficiencies among gears were evaluated. Centipede nets were used in all the three types of habitats and cast nets and gill nets in treeless mudflats and creeks. Fish assemblages were dependent on gears used. Centipede net could efficiently catch fish occurring both inside and outside of vegetated areas efficiently. A total of 115 fish species in 51 families were collected. In terms of numbers of species per family, Gobiidae was the most diverse (17 species), followed by Mugilidae (5 species). Almost all of the fish were juvenile or small fish and few predators were recorded, implying low predation pressure in the bay. ANOVA analysis showed that significant seasonal and spatial variation existed in species richness, abundance, and biomass, which were less in the vegetated areas than those of treeless mudflats and creeks. The attraction of vegetated areas to fish was less than that of creeks and mudflats. Many species were specific to a particular habitat type, 4 species occurring exclusively in the creeks, 45 species occurring exclusively in the treeless mudflats, and 5 species occurring exclusively in the vegetated areas. The results indicated that mangrove estuaries were potentially attractive habitats for juvenile and small fish, but this attraction was accomplished by a connection of vegetated areas, treeless mudflats and creeks, not only by vegetated areas.

A rop net and removable walkway used to quantitatively sample fishes over wetland surfaces in the dwarf mangrove of the Southern Everglades

USGS Publications Warehouse

Lorenz, J.J.; McIvor, C.C.; Powell, G.V.N.; Frederick, P.C.

1997-01-01

We describe a 9 m2 drop net and removable walkways designed to quantify densities of small fishes in wetland habitats with low to moderate vegetation density. The method permits the collection of small, quantitative, discrete samples in ecologically sensitive areas by combining rapid net deployment from fixed sites with the carefully contained use of the fish toxicant rotenone. This method requires very little contact with the substrate, causes minimal alteration to the habitat being sampled, samples small fishes in an unbiased manner, and allows for differential sampling of microhabitats within a wetland. When used in dwarf red mangrove (Rhizophora mangle) habitat in southern Everglades National Park and adjacent areas (September 1990 to March 1993), we achieved high recovery efficiencies (78–90%) for five common species <110 mm in length. We captured 20,193 individuals of 26 species. The most abundant fishes were sheepshead minnowCyprinodon variegatus, goldspotted killifishFloridichthys carpio, rainwater killifishLucania parva, sailfin mollyPoecilia latipinna, and the exotic Mayan cichlidCichlasoma urophthalmus. The 9 m2 drop net and associated removable walkways are versatile and can be used in a variety of wetland types, including both interior and coastal wetlands with either herbaceous or woody vegetation.

The genomic landscape of small intestine neuroendocrine tumors.

PubMed

Banck, Michaela S; Kanwar, Rahul; Kulkarni, Amit A; Boora, Ganesh K; Metge, Franziska; Kipp, Benjamin R; Zhang, Lizhi; Thorland, Erik C; Minn, Kay T; Tentu, Ramesh; Eckloff, Bruce W; Wieben, Eric D; Wu, Yanhong; Cunningham, Julie M; Nagorney, David M; Gilbert, Judith A; Ames, Matthew M; Beutler, Andreas S

2013-06-01

Small intestine neuroendocrine tumors (SI-NETs) are the most common malignancy of the small bowel. Several clinical trials target PI3K/Akt/mTOR signaling; however, it is unknown whether these or other genes are genetically altered in these tumors. To address the underlying genetics, we analyzed 48 SI-NETs by massively parallel exome sequencing. We detected an average of 0.1 somatic single nucleotide variants (SNVs) per 106 nucleotides (range, 0-0.59), mostly transitions (C>T and A>G), which suggests that SI-NETs are stable cancers. 197 protein-altering somatic SNVs affected a preponderance of cancer genes, including FGFR2, MEN1, HOOK3, EZH2, MLF1, CARD11, VHL, NONO, and SMAD1. Integrative analysis of SNVs and somatic copy number variations identified recurrently altered mechanisms of carcinogenesis: chromatin remodeling, DNA damage, apoptosis, RAS signaling, and axon guidance. Candidate therapeutically relevant alterations were found in 35 patients, including SRC, SMAD family genes, AURKA, EGFR, HSP90, and PDGFR. Mutually exclusive amplification of AKT1 or AKT2 was the most common event in the 16 patients with alterations of PI3K/Akt/mTOR signaling. We conclude that sequencing-based analysis may provide provisional grouping of SI-NETs by therapeutic targets or deregulated pathways.

The genomic landscape of small intestine neuroendocrine tumors

PubMed Central

Banck, Michaela S.; Kanwar, Rahul; Kulkarni, Amit A.; Boora, Ganesh K.; Metge, Franziska; Kipp, Benjamin R.; Zhang, Lizhi; Thorland, Erik C.; Minn, Kay T.; Tentu, Ramesh; Eckloff, Bruce W.; Wieben, Eric D.; Wu, Yanhong; Cunningham, Julie M.; Nagorney, David M.; Gilbert, Judith A.; Ames, Matthew M.; Beutler, Andreas S.

2013-01-01

Small intestine neuroendocrine tumors (SI-NETs) are the most common malignancy of the small bowel. Several clinical trials target PI3K/Akt/mTOR signaling; however, it is unknown whether these or other genes are genetically altered in these tumors. To address the underlying genetics, we analyzed 48 SI-NETs by massively parallel exome sequencing. We detected an average of 0.1 somatic single nucleotide variants (SNVs) per 106 nucleotides (range, 0–0.59), mostly transitions (C>T and A>G), which suggests that SI-NETs are stable cancers. 197 protein-altering somatic SNVs affected a preponderance of cancer genes, including FGFR2, MEN1, HOOK3, EZH2, MLF1, CARD11, VHL, NONO, and SMAD1. Integrative analysis of SNVs and somatic copy number variations identified recurrently altered mechanisms of carcinogenesis: chromatin remodeling, DNA damage, apoptosis, RAS signaling, and axon guidance. Candidate therapeutically relevant alterations were found in 35 patients, including SRC, SMAD family genes, AURKA, EGFR, HSP90, and PDGFR. Mutually exclusive amplification of AKT1 or AKT2 was the most common event in the 16 patients with alterations of PI3K/Akt/mTOR signaling. We conclude that sequencing-based analysis may provide provisional grouping of SI-NETs by therapeutic targets or deregulated pathways. PMID:23676460

NetProt: Complex-based Feature Selection.

PubMed

Goh, Wilson Wen Bin; Wong, Limsoon

2017-08-04

Protein complex-based feature selection (PCBFS) provides unparalleled reproducibility with high phenotypic relevance on proteomics data. Currently, there are five PCBFS paradigms, but not all representative methods have been implemented or made readily available. To allow general users to take advantage of these methods, we developed the R-package NetProt, which provides implementations of representative feature-selection methods. NetProt also provides methods for generating simulated differential data and generating pseudocomplexes for complex-based performance benchmarking. The NetProt open source R package is available for download from https://github.com/gohwils/NetProt/releases/ , and online documentation is available at http://rpubs.com/gohwils/204259 .

FloVis: Leveraging Visualization to Protect Sensitive Network Infrastructure

DTIC Science & Technology

2010-11-01

words, we are clustering the hourly web surfing patterns of users on a small private network. The data in this case is filtered NetFlow records...Entity-based NetFlow Visualization Utility for Identifying Intrusive Behavior. In Goodall et al. (eds.), Mathematics and Visualization (Proceedings

Accelerating Exploitation of Low-grade Intelligence through Semantic Text Processing of Social Media

DTIC Science & Technology

2013-06-01

importance as an information source. The brevity of social media content (e.g., 140 characters per tweet) combined with the increasing usage of mobile...platform imports unstructured text from a variety of sources and then maps the text to an existing ontology of frames (FrameNet, https...framenet.icsi.berkeley.edu/fndrupal/) during a process of Semantic Role Labeling ( SRL ). FrameNet is a structured language model grounded in the theory of Frame

A comparison of survey methods for documenting presence of Myotis leibii (Eastern Small-Footed Bats) at roosting areas in Western Virginia

USGS Publications Warehouse

Huth, John K.; Silvis, Alexander; Moosman, Paul R.; Ford, W. Mark; Sweeten, Sara E.

2015-01-01

Many aspects of foraging and roosting habitat of Myotis leibii (Eastern Small-Footed Bat), an emergent rock roosting-obligate, are poorly described. Previous comparisons of effectiveness of acoustic sampling and mist-net captures have not included Eastern Small-Footed Bat. Habitat requirements of this species differ from congeners in the region, and it is unclear whether survey protocols developed for other species are applicable. Using data from three overlapping studies at two sampling sites in western Virginia’s central Appalachian Mountains, detection probabilities were examined for three survey methods (acoustic surveys with automated identification of calls, visual searches of rock crevices, and mist-netting) for use in the development of “best practices” for future surveys and monitoring. Observer effects were investigated using an expanded version of visual search data. Results suggested that acoustic surveys with automated call identification are not effective for documenting presence of Eastern Small-Footed Bats on talus slopes (basal detection rate of 0%) even when the species is known to be present. The broadband, high frequency echolocation calls emitted by Eastern Small-Footed Bat may be prone to attenuation by virtue of their high frequencies, and these factors, along with signal reflection, lower echolocation rates or possible misidentification to other bat species over talus slopes may all have contributed to poor acoustic survey success. Visual searches and mist-netting of emergent rock had basal detection probabilities of 91% and 75%, respectively. Success of visual searches varied among observers, but detection probability improved with practice. Additionally, visual searches were considerably more economical than mist-netting.

Lymphovascular invasion in more than one-quarter of small rectal neuroendocrine tumors

PubMed Central

Kwon, Mi Jung; Kang, Ho Suk; Soh, Jae Seung; Lim, Hyun; Kim, Jong Hyeok; Park, Choong Kee; Park, Hye-Rim; Nam, Eun Sook

2016-01-01

AIM To identify the frequency, clinicopathological risk factors, and prognostic significance of lymphovascular invasion (LVI) in endoscopically resected small rectal neuroendocrine tumors (NETs). METHODS Between June 2005 and December 2015, 104 cases of endoscopically resected small (≤ 1 cm) rectal NET specimens at Hallym University Sacred Heart Hospital in Korea were retrospectively evaluated. We compared the detected rate of LVI in small rectal NET specimens by two methods: hematoxylin and eosin (H&E) and ancillary immunohistochemical staining (D2-40 and Elastica van Gieson); in addition, LVI detection rate difference between endoscopic procedures were also evaluated. Patient characteristics, prognosis and endoscopic resection results were reviewed by medical charts. RESULTS We observed LVI rates of 25.0% and 27.9% through H&E and ancillary immunohistochemical staining. The concordance rate between H&E and ancillary studies was 81.7% for detection of LVI, which showed statistically strong agreement between two methods (κ = 0.531, P < 0.001). Two endoscopic methods were studied, including endoscopic submucosal resection with a ligation device and endoscopic submucosal dissection, and no statistically significant difference in the LVI detection rate was detected between the two (26.3% and 26.8%, P = 0.955). LVI was associated with large tumor size (> 5 mm, P = 0.007), tumor grade 2 (P = 0.006). Among those factors, tumor grade 2 was the only independent predictive factor for the presence of LVI (HR = 4.195, 95%CI: 1.321-12.692, P = 0.015). No recurrence was observed over 28.8 mo regardless of the presence of LVI. CONCLUSION LVI may be present in a high percentage of small rectal NETs, which may not be associated with short-term prognosis. PMID:27895428

48 CFR 19.304 - Disadvantaged business status.

Code of Federal Regulations, 2011 CFR

2011-10-01

... identified as a small disadvantaged business concern by accessing SBA's database (PRO-Net) or by contacting... shall notify the Small Business Administration Assistant Administrator for SDBCE 409 Third Street, SW...

48 CFR 19.304 - Disadvantaged business status.

Code of Federal Regulations, 2014 CFR

2014-10-01

... identified as a small disadvantaged business concern by accessing SBA's database (PRO-Net) or by contacting... shall notify the Small Business Administration Assistant Administrator for SDBCE 409 Third Street, SW...

48 CFR 19.304 - Disadvantaged business status.

Code of Federal Regulations, 2013 CFR

2013-10-01

... identified as a small disadvantaged business concern by accessing SBA's database (PRO-Net) or by contacting... shall notify the Small Business Administration Assistant Administrator for SDBCE 409 Third Street, SW...

48 CFR 19.304 - Disadvantaged business status.

Code of Federal Regulations, 2012 CFR

2012-10-01

... identified as a small disadvantaged business concern by accessing SBA's database (PRO-Net) or by contacting... shall notify the Small Business Administration Assistant Administrator for SDBCE 409 Third Street, SW...

Retrofitting impervious urban infrastructure with green technology for rainfall-runoff restoration, indirect reuse and pollution load reduction.

PubMed

Sansalone, John; Raje, Saurabh; Kertesz, Ruben; Maccarone, Kerrilynn; Seltzer, Karl; Siminari, Michele; Simms, Peter; Wood, Brandon

2013-12-01

The built environs alter hydrology and water resource chemistry. Florida is subject to nutrient criteria and is promulgating "no-net-load-increase" criteria for runoff and constituents (nutrients and particulate matter, PM). With such criteria, green infrastructure, hydrologic restoration, indirect reuse and source control are potential design solutions. The study simulates runoff and constituent load control through urban source area re-design to provide long-term "no-net-load-increases". A long-term continuous simulation of pre- and post-development response for an existing surface parking facility is quantified. Retrofits include a biofiltration area reactor (BAR) for hydrologic and denitrification control. A linear infiltration reactor (LIR) of cementitious permeable pavement (CPP) provides infiltration, adsorption and filtration. Pavement cleaning provided source control. Simulation of climate and source area data indicates re-design achieves "no-net-load-increases" at lower costs compared to standard construction. The retrofit system yields lower cost per nutrient load treated compared to Best Management Practices (BMPs). Copyright © 2013 Elsevier Ltd. All rights reserved.

A Problem-Solving Environment for Biological Network Informatics: Bio-Spice

DTIC Science & Technology

2007-06-01

user an environment to access software tools. The Dashboard is built upon the NetBeans Integrated Development Environment (IDE), an open source Java...based integration platform was demonstrated. During the subsequent six month development cycle, the first version of the NetBeans based Bio-SPICE...frameworks (OAA, NetBeans , and Systems Biology Workbench (SBW)[15]), it becomes possible for Bio-SPICE tools to truly interoperate. This interoperation

Learning Management Platform for CyberCIEGE

DTIC Science & Technology

2011-12-01

developments were done using the NetBeans Integrated Development Environment (IDE) 7.0, which is a free and open source IDE. Some of these...developments could be implemented using the GUI design features of NetBeans . However, it was not done so because the existing Campaign Analyzer code base...directory through a dialog window. Also, the existing directory structures are not consistent with NetBeans project management assumptions and thus

Comparing the net cost of CSP-TES to PV deployed with battery storage

NASA Astrophysics Data System (ADS)

Jorgenson, Jennie; Mehos, Mark; Denholm, Paul

2016-05-01

Concentrated solar power with thermal energy storage (CSP-TES) is a unique source of renewable energy in that its energy can be shifted over time and it can provide the electricity system with dependable generation capacity. In this study, we provide a framework to determine if the benefits of CSP-TES (shiftable energy and the ability to provide firm capacity) exceed the benefits of PV and firm capacity sources such as long-duration battery storage or conventional natural gas combustion turbines (CTs). The results of this study using current capital cost estimates indicate that a combination of PV and conventional gas CTs provides a lower net cost compared to CSP-TES and PV with batteries. Some configurations of CSP-TES have a lower net cost than PV with batteries for even the lowest battery cost estimate. Using projected capital cost targets, however, some configurations of CSP-TES have a lower net cost than PV with either option for even the lowest battery cost estimate. The net cost of CSP-TES varies with configuration, and lower solar multiples coupled with less storage are more attractive at current cost levels, due to high component costs. However, higher solar multiples show a lower net cost using projected future costs for heliostats and thermal storage materials.

Aboveground net primary production responses to water availability in the Chihuhuan Desert: importance of legacy effects

USDA-ARS?s Scientific Manuscript database

In arid ecosystems, current year precipitation explains a small proportion of annual aboveground net primary production (ANPP). Precipitation that occurred in previous years may be responsible for the observed difference between actual and expected ANPP, a concept that we called legacy. Thus, previo...

Methods of increasing net work output of organic Rankine cycles for low-grade waste heat recovery with a detailed analysis using a zeotropic working fluid mixture and scroll expander

NASA Astrophysics Data System (ADS)

Woodland, Brandon Jay

An organic Rankine cycle (ORC) is a thermodynamic cycle that is well-suited for waste heat recovery. It is generally employed for waste heat with temperatures in the range of 80 °C -- 300 °C. When the application is strictly to convert waste heat into work, thermal efficiency is not recommended as a key performance metric. In such an application, maximization of the net power output should be the objective rather than maximization of the thermal efficiency. Two alternative cycle configurations that can increase the net power produced from a heat source with a given temperature and flow rate are proposed and analyzed. These cycle configurations are 1) an ORC with two-phase flash expansion and 2) an ORC with a zeotropic working fluid mixture (ZRC). A design-stage ORC model is presented for consistent comparison of multiple ORC configurations. The finite capacity of the heat source and heat sink fluids is a key consideration in this model. Of all working fluids studied for the baseline ORC, R134a and R245fa yield the highest net power output from a given heat source. Results of the design-stage model indicate that the ORC with two-phase flash expansion offers the most improvement over the baseline ORC. However, the level of improvement that could be achieved in practice is highly uncertain due to the requirement of highly efficient two-phase expansion. The ZRC shows improvement over the baseline as long as the condenser fan power requirement is not negligible. At the highest estimated condenser fan power, the ZRC shows the most improvement, while the ORC with flash expansion is no longer beneficial. The ZRC was selected for detailed study because it does not require two-phase expansion. An experimental test rig was used to evaluate baseline ORC performance with R134a and with R245fa. The ZRC was tested on the same rig with a mixture of 62.5% R134a and 37.5% R245fa. The tested expander is a minimally-modified, of-the-shelf automotive scroll compressor. The high performance to cost ratio of this machine lends significant credence to the economic viability of small-scale, low-temperature ORCs. The experimental campaign covered two heat source temperatures, the full range of pump and expander speeds, a full range of heat source and heat sink fluid flow rates, and various charge levels for the three working fluids. This resulted in 366 steady-state measurements. The steady state measurements are used to develop a detailed ORC model. The model is based on multi-fluid performance maps for the pump and expander and a robust moving-boundary heat exchanger model. It is validated against the measured data and predicts the net power output of the tested ORC with a mean absolute percent error of 7.16%. Comparisons made with the detailed model confirm the predictions of the design-stage model. Using a conservative estimate of the condenser fan power, 19.1% improvement of the ZRC over the baseline ORC is indicated for a source temperature of 80 °C. For a 100 °C source temperature, 13.8% improvement is indicated. A key feature of the detailed ORC model is that it calculates the charge inventory of the working fluid in each heat exchanger and line set. Total system charge can also be specified as a model input. The model can represent the total charge well for R134a at low measured charge levels. As the measured charge level increases, the model becomes less accurate. Reasons for the deviation of the model at higher charge are investigated. It is expected that a charge tuning scheme could be employed to improve the accuracy of model-predicted charge.

There is no temperature dependence of net biochemical fractionation of hydrogen and oxygen isotopes in tree-ring cellulose.

PubMed

Roden, J S; Ehleringer, J R

2000-01-01

The isotopic composition of tree-ring cellulose was obtained over a two-year period from small diameter, riparian zone trees along an elevational transect in Big Cottonwood Canyon, Utah, USA to test for a possible temperature dependence of net biological fractionation during cellulose synthesis. The isotope ratios of stream water varied by only 3.6% and 0.2% in deltaD and delta18O, respectively, over an elevation change of 810m. The similarity in stream water and macroenvironment over the short (13km) transect produced nearly constant stem and leaf water deltaD and delta18O values. In addition, what few seasonal variations observed in the isotopic composition of source water and atmospheric water vapor or in leaf water evaporative enrichment were experienced equally by all sites along the elevational transect. The temperature at each site along the transect spanned a range of > or = 5 degrees C as calculated using the adiabatic lapse rate. Since the deltaD and delta18O values of stem and leaf water varied little for these trees over this elevation/temperature transect, any differences in tree-ring cellulose deltaD and delta18O values should have been associated with temperature effects on net biological fractionation. However, the slopes of the regressions of elevation versus the deltaD and delta18O values of tree-ring cellulose were not significantly different from zero indicating little or no temperature dependence of net biological fractionation. Therefore, cross-site climatic reconstruction studies using the isotope ratios of cellulose need not be concerned that temperatures during the growing season have influenced results.

Neutrophil extracellular traps in vasculitis, friend or foe?

PubMed

Söderberg, Daniel; Segelmark, Mårten

2018-01-01

Neutrophil extracellular traps (NETs) can be found at the sites of vascular lesions and in the circulation of patients with active small vessel vasculitis. Neutrophils from vasculitis patients release more NETs in vitro, and NETs have properties that can harm the vasculature both directly and indirectly. There are several ways to interfere with NET formation, which open for new therapeutic options. However, there are several types of NETs and different mechanisms of NET formation, and these might have different effects on inflammation. Here we review recent findings regarding the pathogenesis and therapeutic potentials of NETs in vasculitis. Experimental mouse models support a role for NETs in promoting vascular damage, where histones and mitochondrial DNA appear to be driving forces. Impaired formation of NETs, however, in an SLE-like mouse model leads to more severe disease, suggesting that NETs can be important in limiting inflammation. Studies on drug-induced vasculitis reveal that levamisole can induce NETosis via muscarinic receptors, predisposing for the generation of autoantibodies, including antineutrophil cytoplasmic autoantibodies (ANCA). This supports the notion that NETs can bridge the innate and adaptive immune systems. NETs can participate in the pathogenesis of vasculitis, but in some models there also seem to be protective effects of NETs. This complexity needs further evaluation with experimental models that are as specific as possible for human primary vasculitis.

MPIGeneNet: Parallel Calculation of Gene Co-Expression Networks on Multicore Clusters.

PubMed

Gonzalez-Dominguez, Jorge; Martin, Maria J

2017-10-10

In this work we present MPIGeneNet, a parallel tool that applies Pearson's correlation and Random Matrix Theory to construct gene co-expression networks. It is based on the state-of-the-art sequential tool RMTGeneNet, which provides networks with high robustness and sensitivity at the expenses of relatively long runtimes for large scale input datasets. MPIGeneNet returns the same results as RMTGeneNet but improves the memory management, reduces the I/O cost, and accelerates the two most computationally demanding steps of co-expression network construction by exploiting the compute capabilities of common multicore CPU clusters. Our performance evaluation on two different systems using three typical input datasets shows that MPIGeneNet is significantly faster than RMTGeneNet. As an example, our tool is up to 175.41 times faster on a cluster with eight nodes, each one containing two 12-core Intel Haswell processors. Source code of MPIGeneNet, as well as a reference manual, are available at https://sourceforge.net/projects/mpigenenet/.

Plumbing the global carbon cycle: Integrating inland waters into the terrestrial carbon budget

USGS Publications Warehouse

Cole, J.J.; Prairie, Y.T.; Caraco, N.F.; McDowell, W.H.; Tranvik, L.J.; Striegl, Robert G.; Duarte, C.M.; Kortelainen, Pirkko; Downing, J.A.; Middelburg, J.J.; Melack, J.

2007-01-01

Because freshwater covers such a small fraction of the Earth's surface area, inland freshwater ecosystems (particularly lakes, rivers, and reservoirs) have rarely been considered as potentially important quantitative components of the carbon cycle at either global or regional scales. By taking published estimates of gas exchange, sediment accumulation, and carbon transport for a variety of aquatic systems, we have constructed a budget for the role of inland water ecosystems in the global carbon cycle. Our analysis conservatively estimates that inland waters annually receive, from a combination of background and anthropogenically altered sources, on the order of 1.9 Pg C y-1 from the terrestrial landscape, of which about 0.2 is buried in aquatic sediments, at least 0.8 (possibly much more) is returned to the atmosphere as gas exchange while the remaining 0.9 Pg y-1 is delivered to the oceans, roughly equally as inorganic and organic carbon. Thus, roughly twice as much C enters inland aquatic systems from land as is exported from land to the sea. Over prolonged time net carbon fluxes in aquatic systems tend to be greater per unit area than in much of the surrounding land. Although their area is small, these freshwater aquatic systems can affect regional C balances. Further, the inclusion of inland, freshwater ecosystems provides useful insight about the storage, oxidation and transport of terrestrial C, and may warrant a revision of how the modern net C sink on land is described. ?? 2007 Springer Science+Business Media, LLC.

Postprandial PYY increase by resistant starch supplementation is independent of net portal appearance of short-chain fatty acids in pigs.

PubMed

Ingerslev, Anne Krog; Mutt, Shivaprakash Jagalur; Lærke, Helle Nygaard; Hedemann, Mette Skou; Theil, Peter Kappel; Nielsen, Kirstine Lykke; Jørgensen, Henry; Herzig, Karl-Heinz; Bach Knudsen, Knud Erik

2017-01-01

Increased dietary fiber (DF) fermentation and short-chain fatty acid (SCFA) production may stimulate peptide tyrosine-tyrosine (PYY) secretion. In this study, the effects of hindgut SCFA production on postprandial PYY plasma levels were assessed using different experimental diets in a porto-arterial catheterized pig model. The pigs were fed experimental diets varying in source and levels of DF for one week in 3×3 Latin square designs. The DF sources were whole-wheat grain, wheat aleurone, rye aleurone-rich flour, rye flakes, and resistant starch. Postprandial blood samples were collected from the catheters and analyzed for PYY levels and net portal appearance (NPA) of PYY was correlated to NPA of SCFA. No significant effects of diets on NPA of PYY were observed (P > 0.05), however, resistant starch supplementation increased postprandial NPA of PYY levels by 37 to 54% compared with rye-based and Western-style control diets (P = 0.19). This increase was caused by higher mesenteric artery and portal vein PYY plasma levels (P < 0.001) and was independent of SCFA absorption (P > 0.05). The PYY levels were higher in response to the second daily meal compared with the first daily meal (P < 0.001), but similar among diets (P > 0.10). In conclusion, the increased postprandial PYY responses in pigs fed with different levels and sources of DF are not caused by an increased SCFA absorption and suggest that other mechanisms such as neural reflexes and possibly an increased flow of digesta in the small intestine may be involved. The content of DF and SCFA production did not affect PYY levels.

Study of magnetic fields from power-frequency current on water lines.

PubMed

Lanera, D; Zapotosky, J E; Colby, J A

1997-01-01

The magnetic fields from power-frequency current flowing on water lines were investigated in a new approach that involved an area-wide survey in a small town. Magnetic fields were measured outside the residence under power cables and over water lines, and each residence was characterized as to whether it received water from a private well or the municipal water system. The magnetic field data revealed two statistical modes when they were related to water supply type. The data also showed that in the case of the high mode, the magnetic field remained constant along the line formed by power drop wires, at the back of the house, and the water hookup service, in front of the house, all the way to the street. The patterns are explained by the coincidence of measurement points and the presence of net current flowing on power mains, power drop conductors, residential plumbing, water service hookups, and water mains. These patterns, together with other characteristics of this magnetic field source, such as the gradual spatial fall-off of this field and the presence of a constant component in the time sequence, portray a magnetic field more uniform and constant in the residential environment than has been thought to exist. Such characteristics make up for the weakness of the source and make net current a significant source of exposure in the lives of individuals around the house, when human exposure to magnetic fields is assumed to be a cumulative effect over time. This, together with the bimodal statistical distribution of the residential magnetic field (related to water supply type), presents opportunities for retrospective epidemiological analysis. Water line type and its ability to conduct power-frequency current can be used as the historical marker for a bimodal exposure inference, as Wertheimer et al. have shown.

Role of metabolite transporters in source-sink carbon allocation

PubMed Central

Ludewig, Frank; Flügge, Ulf-Ingo

2013-01-01

Plants assimilate carbon dioxide during photosynthesis in chloroplasts. Assimilated carbon is subsequently allocated throughout the plant. Generally, two types of organs can be distinguished, mature green source leaves as net photoassimilate exporters, and net importers, the sinks, e.g., roots, flowers, small leaves, and storage organs like tubers. Within these organs, different tissue types developed according to their respective function, and cells of either tissue type are highly compartmentalized. Photoassimilates are allocated to distinct compartments of these tissues in all organs, requiring a set of metabolite transporters mediating this intercompartmental transfer. The general route of photoassimilates can be briefly described as follows. Upon fixation of carbon dioxide in chloroplasts of mesophyll cells, triose phosphates either enter the cytosol for mainly sucrose formation or remain in the stroma to form transiently stored starch which is degraded during the night and enters the cytosol as maltose or glucose to be further metabolized to sucrose. In both cases, sucrose enters the phloem for long distance transport or is transiently stored in the vacuole, or can be degraded to hexoses which also can be stored in the vacuole. In the majority of plant species, sucrose is actively loaded into the phloem via the apoplast. Following long distance transport, it is released into sink organs, where it enters cells as source of carbon and energy. In storage organs, sucrose can be stored, or carbon derived from sucrose can be stored as starch in plastids, or as oil in oil bodies, or – in combination with nitrogen – as protein in protein storage vacuoles and protein bodies. Here, we focus on transport proteins known for either of these steps, and discuss the implications for yield increase in plants upon genetic engineering of respective transporters. PMID:23847636

A cool-temperate young larch plantation as a net methane source - A 4-year continuous hyperbolic relaxed eddy accumulation and chamber measurements

NASA Astrophysics Data System (ADS)

Ueyama, Masahito; Yoshikawa, Kota; Takagi, Kentaro

2018-07-01

Upland forests are thought to be methane (CH4) sinks due to oxidation by methanotrophs in aerobic soils. However, CH4 budget for upland forests are not well quantified at the ecosystem scale, when possible CH4 sources, such as small wet areas, exists in the ecosystem. Here, we quantified CH4 fluxes in a cool-temperate larch plantation based on four-year continuous measurements using the hyperbolic relaxed eddy accumulation (HREA) method and dynamic closed chambers with a laser-based analyzer. After filling data gaps for half-hourly data using machine-learning-based regressions, we found that the forest acted as a net CH4 source at the canopy scale: 30 ± 11 mg CH4 m-2 yr-1 in 2014, 56 ± 8 mg CH4 m-2 yr-1 in 2015, 154 ± 5 mg CH4 m-2 yr-1 in 2016, and 132 ± 6 mg CH4 m-2 yr-1 in 2017. Hotspot emissions from the edge of the pond could strongly contribute to the canopy-scale emissions. The magnitude of the hotspot emissions was 10-100 times greater than the order of the canopy-scale and chamber-based CH4 fluxes at the dry soils. The high temperatures with wet conditions stimulated the hotspot emissions, and thus induced canopy-scale CH4 emissions in the summer. Understanding and modeling the dynamics of hotspot emissions are important for quantifying CH4 budgets of upland forests. Micrometeorological measurements at various forests are required for revisiting CH4 budget of upland forests.

A large-area RF source for negative hydrogen ions

NASA Astrophysics Data System (ADS)

Frank, P.; Feist, J. H.; Kraus, W.; Speth, E.; Heinemann, B.; Probst, F.; Trainham, R.; Jacquot, C.

1998-08-01

In a collaboration with CEA Cadarache, IPP is presently developing an rf source, in which the production of negative ions (H-/D-) is being investigated. It utilizes PINI-size rf sources with an external antenna and for the first step a small size extraction system with 48 cm2 net extraction area. First results from BATMAN (Ba¯varian T_est Ma¯chine for N_egative Ions) show (without Cs) a linear dependence of the negative ion yield with rf power, without any sign of saturation. At elevated pressure (1.6 Pa) a current density of 4.5 mA/cm2 H- (without Cs) has been found so far. At medium pressure (0.6 Pa) the current density is lower by approx. a factor of 5, but preliminary results with Cesium injection show a relative increase by almost the same factor in this pressure range. Langmuir probe measurements indicate an electron temperature Te>2 eV close to the plasma grid with a moderate magnetic filter (700 Gcm). Attempts to improve the performance by using different magnetic configurations and different wall materials are under way.

Low dissolved organic carbon input from fresh litter to deep mineral soils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Froeberg, Mats J; Jardine, Philip M; Hanson, Paul J

2007-01-01

Dissolved organic carbon (DOC) leached from recent litter in the forest floor has been suggested to be an important source of C to the mineral soil of forest ecosystems. In order to determine the rate at which this flux of C occurs we have taken advantage of a local release of 14C at Oak Ridge National Laboratory Reservation, USA (latitude N 35 58'; longitude W 84 16'). Eight replicate 7x7 m plots were estab lished at four field sites on the reservation in an upland oak forest setting. Half of the plots were provided with 14C-enriched litter (∆14C ≈1000 ),more » and the other half with near-background litter (∆14C ≈220 ) over multiple years. Differences in the labeled leaf litter were used to quantify the movement of litter derived DOC through the soil profile. Soil solutions were collected over several years with tension lysimeters at 15 and 70 cm depth and measured for DOC concentration and 14C abundance. The net amount of DOC retained between 15 and 70 cm was 1.5-6 g m-2 y-1. There were significant effects of the litter additions on the 14C abundance in the DOC, but the net transport of 14C from the added litter was small. The difference in ∆14C between the treatments with enriched and near-background litter was only about 130 at both depths, which is small compared with the difference in Δ14C in the added litter. The primary source of DOC within the mineral soil must therefore have been either the Oe/Oa horizon or the organic matter in the mineral soil. Over a 2-year time frame, leaching of DOC from recent litter did not have a major impact on the C stock in the mineral soil below 15 cm in this ecosystem.« less

The greenhouse gas balance of European grasslands.

PubMed

Chang, Jinfeng; Ciais, Philippe; Viovy, Nicolas; Vuichard, Nicolas; Sultan, Benjamin; Soussana, Jean-François

2015-10-01

The greenhouse gas (GHG) balance of European grasslands (EU-28 plus Norway and Switzerland), including CO2 , CH4 and N2 O, is estimated using the new process-based biogeochemical model ORCHIDEE-GM over the period 1961-2010. The model includes the following: (1) a mechanistic representation of the spatial distribution of management practice; (2) management intensity, going from intensively to extensively managed; (3) gridded simulation of the carbon balance at ecosystem and farm scale; and (4) gridded simulation of N2 O and CH4 emissions by fertilized grassland soils and livestock. The external drivers of the model are changing animal numbers, nitrogen fertilization and deposition, land-use change, and variable CO2 and climate. The carbon balance of European grassland (NBP) is estimated to be a net sink of 15 ± 7 g C m(-2 ) year(-1) during 1961-2010, equivalent to a 50-year continental cumulative soil carbon sequestration of 1.0 ± 0.4 Pg C. At the farm scale, which includes both ecosystem CO2 fluxes and CO2 emissions from the digestion of harvested forage, the net C balance is roughly halved, down to a small sink, or nearly neutral flux of 8 g C m(-2 ) year(-1) . Adding CH4 and N2 O emissions to net ecosystem exchange to define the ecosystem-scale GHG balance, we found that grasslands remain a net GHG sink of 19 ± 10 g C-CO2 equiv. m(-2 ) year(-1) , because the CO2 sink offsets N2 O and grazing animal CH4 emissions. However, when considering the farm scale, the GHG balance (NGB) becomes a net GHG source of -50 g C-CO2 equiv. m(-2 ) year(-1) . ORCHIDEE-GM simulated an increase in European grassland NBP during the last five decades. This enhanced NBP reflects the combination of a positive trend of net primary production due to CO2 , climate and nitrogen fertilization and the diminishing requirement for grass forage due to the Europe-wide reduction in livestock numbers. © 2015 John Wiley & Sons Ltd.

Spatial and seasonal variability of base flow in the Verde Valley, central Arizona, 2007 and 2011

USGS Publications Warehouse

Garner, Bradley D.; Bills, Donald J.

2012-01-01

Synoptic base-flow surveys were conducted on streams in the Verde Valley, central Arizona, in June 2007 and February 2011 by the U.S. Geological Survey (USGS), in cooperation with the Verde River Basin Partnership, the Town of Clarkdale, and Yavapai County. These surveys, also known as seepage runs, measured streamflow under base-flow conditions at many locations over a short period of time. Surveys were conducted on a segment of the Verde River that flows through the Verde Valley, between USGS streamflow-gaging stations 09504000 and 09506000, a distance of 51 river miles. Data from the surveys were used to investigate the dominant controls on Verde River base flow, spatial variability in gaining and losing reaches, and the effects that human alterations have on base flow in the surface-water system. The most prominent human alterations in the Verde Valley are dozens of surface-water diversions from streams, including gravity-fed ditch diversions along the Verde River.Base flow that entered the Verde River from the tributary streams of Oak Creek, Beaver Creek, and West Clear Creek was found to be a major source of base flow in the Verde River. Groundwater discharge directly into the Verde River near these three confluences also was an important contributor of base flow to the Verde River, particularly near the confluence with Beaver Creek. An examination of individual reaches of the Verde River in the Verde Valley found three reaches (largely unaffected by ditch diversions) exhibiting a similar pattern: a small net groundwater discharge in February 2011 (12 cubic feet per second or less) and a small net streamflow loss in June 2007 (11 cubic feet per second or less). Two reaches heavily affected by ditch diversions were difficult to interpret because of the large number of confounding human factors. Possible lower and upper bounds of net groundwater flux were calculated for all reaches, including those heavily affected by ditches.

Small cell and large cell neuroendocrine carcinomas of the pancreas are genetically similar and distinct from well-differentiated pancreatic neuroendocrine tumors.

PubMed

Yachida, Shinichi; Vakiani, Efsevia; White, Catherine M; Zhong, Yi; Saunders, Tyler; Morgan, Richard; de Wilde, Roeland F; Maitra, Anirban; Hicks, Jessica; Demarzo, Angelo M; Shi, Chanjuan; Sharma, Rajni; Laheru, Daniel; Edil, Barish H; Wolfgang, Christopher L; Schulick, Richard D; Hruban, Ralph H; Tang, Laura H; Klimstra, David S; Iacobuzio-Donahue, Christine A

2012-02-01

Poorly differentiated neuroendocrine carcinomas (NECs) of the pancreas are rare malignant neoplasms with a poor prognosis. The aim of this study was to determine the clinicopathologic and genetic features of poorly differentiated NECs and compare them with other types of pancreatic neoplasms. We investigated alterations of KRAS, CDKN2A/p16, TP53, SMAD4/DPC4, DAXX, ATRX, PTEN, Bcl2, and RB1 by immunohistochemistry and/or targeted exomic sequencing in surgically resected specimens of 9 small cell NECs, 10 large cell NECs, and 11 well-differentiated neuroendocrine tumors (PanNETs) of the pancreas. Abnormal immunolabeling patterns of p53 and Rb were frequent (p53, 18 of 19, 95%; Rb, 14 of 19, 74%) in both small cell and large cell NECs, whereas Smad4/Dpc4, DAXX, and ATRX labeling was intact in virtually all of these same carcinomas. Abnormal immunolabeling of p53 and Rb proteins correlated with intragenic mutations in the TP53 and RB1 genes. In contrast, DAXX and ATRX labeling was lost in 45% of PanNETs, whereas p53 and Rb immunolabeling was intact in these same cases. Overexpression of Bcl-2 protein was observed in all 9 small cell NECs (100%) and in 5 of 10 (50%) large cell NECs compared with only 2 of 11 (18%) PanNETs. Bcl-2 overexpression was significantly correlated with higher mitotic rate and Ki67 labeling index in neoplasms in which it was present. Small cell NECs are genetically similar to large cell NECs, and these genetic changes are distinct from those reported in PanNETs. The finding of Bcl-2 overexpression in poorly differentiated NECs, particularly small cell NEC, suggests that Bcl-2 antagonists/inhibitors may be a viable treatment option for these patients.

ATLANTIC BIRDS: a data set of bird species from the Brazilian Atlantic Forest.

PubMed

Hasui, Érica; Metzger, Jean Paul; Pimentel, Rafael G; Silveira, Luís Fábio; Bovo, Alex A D A; Martensen, Alexandre C; Uezu, Alexandre; Regolin, André L; Bispo de Oliveira, Arthur Â; Gatto, Cassiano A F R; Duca, Charles; Andretti, Christian B; Banks-Leite, Cristina; Luz, Daniela; Mariz, Daniele; Alexandrino, Eduardo R; de Barros, Fabio M; Martello, Felipe; Pereira, Iolanda M D S; da Silva, José N; Ferraz, Katia M P M D B; Naka, Luciano N; Dos Anjos, Luiz; Efe, Márcio A; Pizo, Marco Aurélio; Pichorim, Mauro; Gonçalves, Maycon Sanyvan S; Cordeiro, Paulo Henrique Chaves; Dias, Rafael A; Muylaert, Renata D L; Rodrigues, Rodolpho C; da Costa, Thiago V V; Cavarzere, Vagner; Tonetti, Vinicius R; Silva, Wesley R; Jenkins, Clinton N; Galetti, Mauro; Ribeiro, Milton C

2018-02-01

South America holds 30% of the world's avifauna, with the Atlantic Forest representing one of the richest regions of the Neotropics. Here we have compiled a data set on Brazilian Atlantic Forest bird occurrence (150,423) and abundance samples (N = 832 bird species; 33,119 bird individuals) using multiple methods, including qualitative surveys, mist nets, point counts, and line transects). We used four main sources of data: museum collections, on-line databases, literature sources, and unpublished reports. The data set comprises 4,122 localities and data from 1815 to 2017. Most studies were conducted in the Florestas de Interior (1,510 localities) and Serra do Mar (1,280 localities) biogeographic sub-regions. Considering the three main quantitative methods (mist net, point count, and line transect), we compiled abundance data for 745 species in 576 communities. In the data set, the most frequent species were Basileuterus culicivorus, Cyclaris gujanensis, and Conophaga lineata. There were 71 singletons, such as Lipaugus conditus and Calyptura cristata. We suggest that this small number of records reinforces the critical situation of these taxa in the Atlantic Forest. The information provided in this data set can be used for macroecological studies and to foster conservation strategies in this biodiversity hotspot. No copyright restrictions are associated with the data set. Please cite this Data Paper if data are used in publications and teaching events. © 2017 by the Ecological Society of America.

75 FR 66411 - Data Collection Available for Public Comments and Recommendations

Federal Register 2010, 2011, 2012, 2013, 2014

2010-10-28

... INFORMATION CONTACT: George Solomon, Office of Senior Policy, 202-205-7343 [email protected] Curtis B. Rich.... Title: ``Small Business Innovation Research (SBIR) and Small Business Technology (STTR) Tech-Net...

KM3NeT

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jong, M. de; Leiden Institute of Physics, Leiden University, Leiden; Collaboration: KM3NeT Collaboration

2015-07-15

KM3NeT is a large research infrastructure, that will consist of a network of deep-sea neutrino telescopes in the Mediterranean Sea. The main objective of KM3NeT is the discovery and subsequent observation of high-energy neutrino sources in the Universe. A further physics perspective is the measurement of the mass hierarchy of neutrinos. A corresponding study, ORCA, is ongoing within KM3NeT. A cost effective technology for (very) large water Cherenkov detectors has been developed based on a new generation of low price 3-inch photo-multiplier tubes. Following the successful deployment and operation of two prototypes, the construction of the KM3NeT research infrastructure hasmore » started. The prospects of the different phases of the implementation of KM3NeT are summarised.« less

KM3NeT

NASA Astrophysics Data System (ADS)

de Jong, M.

2015-07-01

KM3NeT is a large research infrastructure, that will consist of a network of deep-sea neutrino telescopes in the Mediterranean Sea. The main objective of KM3NeT is the discovery and subsequent observation of high-energy neutrino sources in the Universe. A further physics perspective is the measurement of the mass hierarchy of neutrinos. A corresponding study, ORCA, is ongoing within KM3NeT. A cost effective technology for (very) large water Cherenkov detectors has been developed based on a new generation of low price 3-inch photo-multiplier tubes. Following the successful deployment and operation of two prototypes, the construction of the KM3NeT research infrastructure has started. The prospects of the different phases of the implementation of KM3NeT are summarised.

Can net income from non-patient-care activities continue to save hospitals?

PubMed

Schuhmann, Thomas M

2010-05-01

A recent study found that U.S. hospitals are losing billions of dollars per year caring for patients. Hospitals have been able to offset patient care losses with substantial net income from sources not directly connected to patient care. However, this net income declined sharply with the economic downturn in 2008 and 2009, resulting in a decline in overall hospital profitability and putting a cloud of uncertainty over future hospital profitability.

Fates of eroded soil organic carbon: Mississippi Basin case study

USGS Publications Warehouse

Smith, S.V.; Sleezer, R.O.; Renwick, W.H.; Buddemeier, R.W.

2005-01-01

We have developed a mass balance analysis of organic carbon (OC) across the five major river subsystems of the Mississippi (MS) Basin (an area of 3.2 ?? 106 km2). This largely agricultural landscape undergoes a bulk soil erosion rate of ???480 t??km -2??yr-1 (???1500 ?? 106 t/yr, across the MS Basin), and a soil organic carbon (SOC) erosion rate of ???7 t??km-2??yr-1 (???22 ?? 106 t/yr). Erosion translocates upland SOC to alluvial deposits, water impoundments, and the ocean. Soil erosion is generally considered to be a net source of CO2 release to the atmosphere in global budgets. However, our results indicate that SOC erosion and relocation of soil apparently can reduce the net SOC oxidation rate of the original upland SOC while promoting net replacement of eroded SOC in upland soils that were eroded. Soil erosion at the MS Basin scale is, therefore, a net CO2 sink rather than a source. ?? 2005 by the Ecological Society of America.

Origin of the net magnetic moment in LaCoO3

NASA Astrophysics Data System (ADS)

Kaminsky, G. M.; Belanger, D. P.; Ye, F.; Fernandez-Baca, J. A.; Wang, J.; Matsuda, M.; Yan, J.-Q.

2018-01-01

We use polarized neutron scattering to characterize the Bragg scattering intensity below TC=89.5 K at the (1,0,0) pseudocubic nuclear Bragg point of LaCoO3. Upon cooling in a field (FC), a net magnetic moment is apparent in Bragg scattering intensity, just as it was in previous magnetization measurements. Critical behavior associated with the net moment near TC upon cooling in small applied fields rapidly rounds with increasing field strength. We show, using a mean-field calculation, that this net moment can develop in a metastable state that forms upon FC, even when all the interactions in the system are antiferromagnetic.

Efficacy of mosquito netting for sustainable small holders' cabbage production in Africa.

PubMed

Martin, T; Assogba-Komlan, F; Houndete, T; Hougard, J M; Chandre, F

2006-04-01

The efficacy of a mosquito netting to protect cabbages, Brassica oleracea L., against pests was investigated in field trials in Benin, West Africa. A polyester net covered the plants at night by using a wood armature. The net was removed during the day to prevent overheating and excessive shade, both problems of insect-proof screens used under tropical conditions. The number of all lepidopteran larvae with netting protection and foliar insecticide sprays was significantly lower than the unprotected control. The number of diamondback moth, Plutella xylostella (L.), was significantly lower with netting protection compared with foliar insecticide sprays and control. Netting treated with deltamethrin gave total protection of young plants against the aphid Lipaphis erysimi (Kaltenbach). At harvest, the number of marketable cabbages protected with untreated netting was significantly higher compared with the production with foliar insecticide sprays. The protection of cabbages with netting can be an economically viable method. Considering the price of cabbages on local markets (US dollars 1/unit), the net returns per 100 m2 were US dollars 247 by using netting, US dollars 149 by using insecticides, and US dollars 117 for controls. The net returns for using netting are based on replacing the netting each crop cycle. But netting can be reused several times, depending upon conditions, increasing the profit margin. The netting protection may be an alternative to the growing unsustainable practices of vegetable cropping in peri-urban areas of tropical countries.

An Open-source Toolbox for Analysing and Processing PhysioNet Databases in MATLAB and Octave.

PubMed

Silva, Ikaro; Moody, George B

The WaveForm DataBase (WFDB) Toolbox for MATLAB/Octave enables integrated access to PhysioNet's software and databases. Using the WFDB Toolbox for MATLAB/Octave, users have access to over 50 physiological databases in PhysioNet. The toolbox provides access over 4 TB of biomedical signals including ECG, EEG, EMG, and PLETH. Additionally, most signals are accompanied by metadata such as medical annotations of clinical events: arrhythmias, sleep stages, seizures, hypotensive episodes, etc. Users of this toolbox should easily be able to reproduce, validate, and compare results published based on PhysioNet's software and databases.

Utah | Midmarket Solar Policies in the United States | Solar Research |

Science.gov Websites

Credit: Net excess generation is credited at the retail rate for residential and small commercial customers; large commercial and industrial customers with demand charge may choose between valuing net cost) for residential taxpayers; $50,000 (or 10% of system cost) for commercial taxpayers. Renewable

Spatio Temporal EEG Source Imaging with the Hierarchical Bayesian Elastic Net and Elitist Lasso Models

PubMed Central

Paz-Linares, Deirel; Vega-Hernández, Mayrim; Rojas-López, Pedro A.; Valdés-Hernández, Pedro A.; Martínez-Montes, Eduardo; Valdés-Sosa, Pedro A.

2017-01-01

The estimation of EEG generating sources constitutes an Inverse Problem (IP) in Neuroscience. This is an ill-posed problem due to the non-uniqueness of the solution and regularization or prior information is needed to undertake Electrophysiology Source Imaging. Structured Sparsity priors can be attained through combinations of (L1 norm-based) and (L2 norm-based) constraints such as the Elastic Net (ENET) and Elitist Lasso (ELASSO) models. The former model is used to find solutions with a small number of smooth nonzero patches, while the latter imposes different degrees of sparsity simultaneously along different dimensions of the spatio-temporal matrix solutions. Both models have been addressed within the penalized regression approach, where the regularization parameters are selected heuristically, leading usually to non-optimal and computationally expensive solutions. The existing Bayesian formulation of ENET allows hyperparameter learning, but using the computationally intensive Monte Carlo/Expectation Maximization methods, which makes impractical its application to the EEG IP. While the ELASSO have not been considered before into the Bayesian context. In this work, we attempt to solve the EEG IP using a Bayesian framework for ENET and ELASSO models. We propose a Structured Sparse Bayesian Learning algorithm based on combining the Empirical Bayes and the iterative coordinate descent procedures to estimate both the parameters and hyperparameters. Using realistic simulations and avoiding the inverse crime we illustrate that our methods are able to recover complicated source setups more accurately and with a more robust estimation of the hyperparameters and behavior under different sparsity scenarios than classical LORETA, ENET and LASSO Fusion solutions. We also solve the EEG IP using data from a visual attention experiment, finding more interpretable neurophysiological patterns with our methods. The Matlab codes used in this work, including Simulations, Methods, Quality Measures and Visualization Routines are freely available in a public website. PMID:29200994

Spatio Temporal EEG Source Imaging with the Hierarchical Bayesian Elastic Net and Elitist Lasso Models.

PubMed

Paz-Linares, Deirel; Vega-Hernández, Mayrim; Rojas-López, Pedro A; Valdés-Hernández, Pedro A; Martínez-Montes, Eduardo; Valdés-Sosa, Pedro A

2017-01-01

The estimation of EEG generating sources constitutes an Inverse Problem (IP) in Neuroscience. This is an ill-posed problem due to the non-uniqueness of the solution and regularization or prior information is needed to undertake Electrophysiology Source Imaging. Structured Sparsity priors can be attained through combinations of (L1 norm-based) and (L2 norm-based) constraints such as the Elastic Net (ENET) and Elitist Lasso (ELASSO) models. The former model is used to find solutions with a small number of smooth nonzero patches, while the latter imposes different degrees of sparsity simultaneously along different dimensions of the spatio-temporal matrix solutions. Both models have been addressed within the penalized regression approach, where the regularization parameters are selected heuristically, leading usually to non-optimal and computationally expensive solutions. The existing Bayesian formulation of ENET allows hyperparameter learning, but using the computationally intensive Monte Carlo/Expectation Maximization methods, which makes impractical its application to the EEG IP. While the ELASSO have not been considered before into the Bayesian context. In this work, we attempt to solve the EEG IP using a Bayesian framework for ENET and ELASSO models. We propose a Structured Sparse Bayesian Learning algorithm based on combining the Empirical Bayes and the iterative coordinate descent procedures to estimate both the parameters and hyperparameters. Using realistic simulations and avoiding the inverse crime we illustrate that our methods are able to recover complicated source setups more accurately and with a more robust estimation of the hyperparameters and behavior under different sparsity scenarios than classical LORETA, ENET and LASSO Fusion solutions. We also solve the EEG IP using data from a visual attention experiment, finding more interpretable neurophysiological patterns with our methods. The Matlab codes used in this work, including Simulations, Methods, Quality Measures and Visualization Routines are freely available in a public website.

On the dependency of the decay of ground motion peak values with distance for small and large earthquakes

NASA Astrophysics Data System (ADS)

Dujardin, Alain; Courboulex, Françoise; Causse, Matthieu; Traversa, Paola; Monfret, Tony

2013-04-01

Ground motion decay with distance presents a clear magnitude dependence, PGA values of small events decreasing faster than those of larger events. This observation is now widely accepted and often taken into account in recent ground motion prediction equations (Anderson 2005, Akkar & Bommer 2010). The aim of this study is to investigate the origin of this dependence, which has not been clearly identified yet. Two main hypotheses are considered. On one hand the difference of ground motion decay is related to an attenuation effect, on the other hand the difference is related to an effect of extended fault (Anderson 2000). To study the role of attenuation, we realized synthetic tests using the stochastic simulation program SMSIM from Boore (2005). We build a set of simulations from several magnitudes and epicentral distances, and observe that the decay in PGA values is strongly dependent on the spectral shape of the Fourier spectra, which in turn strongly depends on the attenuation factor (Q(f) or kappa). We found that, for a point source approximation and an infinite value of Q (no attenuation) there is no difference between small and large events and that this difference increases when Q decreases. Theses results show that the influence of attenuation on spectral shape is different for earthquakes of different magnitude. In fact the influence of attenuation, which is more important at higher frequency, is larger for small earthquakes, whose Fourier acceleration spectrum has predominantly higher frequencies. We then study the effect of extended source using complete waveform simulations in a 1D model. We find that when the duration of the source time function increases, there is a larger probability to obtain large PGA values at equivalent distances. This effect could also play an important role in the PGA decay with magnitude and distance. Finally we compare these results with real datasets from the Japanese accelerometric network KIK-net.

"Twin copper source" growth of metal-organic framework membrane: Cu(3)(BTC)(2) with high permeability and selectivity for recycling H(2).

PubMed

Guo, Hailing; Zhu, Guangshan; Hewitt, Ian J; Qiu, Shilun

2009-02-11

In this communication, the copper net supported Cu(3)(BTC)(2) membranes have been successfully synthesized by means of a "twin copper source" technique. Separation studies on gaseous mixtures (H(2)/CO(2), H(2)/CH(4), and H(2)/N(2)) using the membrane revealed that the membrane possesses high permeability and selectivity for H(2) over CO(2), N(2), and CH(4). Compared with the conventional zeolite membranes, the copper net supported Cu(3)(BTC)(2) membrane exhibited high permeation flux in gas separation. Such highly efficient copper net supported Cu(3)(BTC)(2) membranes could be used to separate, recycle, and reuse H(2) exhausted from steam reforming natural gas.

Noninvasive Fetal ECG: the PhysioNet/Computing in Cardiology Challenge 2013.

PubMed

Silva, Ikaro; Behar, Joachim; Sameni, Reza; Zhu, Tingting; Oster, Julien; Clifford, Gari D; Moody, George B

2013-03-01

The PhysioNet/CinC 2013 Challenge aimed to stimulate rapid development and improvement of software for estimating fetal heart rate (FHR), fetal interbeat intervals (FRR), and fetal QT intervals (FQT), from multichannel recordings made using electrodes placed on the mother's abdomen. For the challenge, five data collections from a variety of sources were used to compile a large standardized database, which was divided into training, open test, and hidden test subsets. Gold-standard fetal QRS and QT interval annotations were developed using a novel crowd-sourcing framework. The challenge organizers used the hidden test subset to evaluate 91 open-source software entries submitted by 53 international teams of participants in three challenge events, estimating FHR, FRR, and FQT using the hidden test subset, which was not available for study by participants. Two additional events required only user-submitted QRS annotations to evaluate FHR and FRR estimation accuracy using the open test subset available to participants. The challenge yielded a total of 91 open-source software entries. The best of these achieved average estimation errors of 187bpm 2 for FHR, 20.9 ms for FRR, and 152.7 ms for FQT. The open data sets, scoring software, and open-source entries are available at PhysioNet for researchers interested on working on these problems.

Sensitivity of the boreal forest-mire ecotone CO2, CH4, and N2O global warming potential to rainy and dry weather

NASA Astrophysics Data System (ADS)

Ťupek, Boris; Minkkinen, Kari; Vesala, Timo; Nikinmaa, Eero

2015-04-01

In a mosaic of well drained forests and poorly drained mires of boreal landscape the weather events such as drought and rainy control greenhouse gas dynamics and ecosystem global warming potential (GWP). In forest-mire ecotone especially in ecosystems where CO2 sink is nearly balanced with CO2 source, it's fairly unknown whether the net warming effect of emissions of gases with strong radiative forcing (CH4 and N2O) could offset the net cooling effect of CO2 sequestration. We compared the net ecosystem CO2 exchange (NEE) estimated from the carbon sequestrations of forest stands and forest floor CO2 fluxes against CH4 and N2O fluxes of nine forest/mire site types along the soil moisture gradient in Finland. The ground water of nine sites changed between 10 m in upland forests and 0.1 m in mires, and weather during three years ranged between exceptionally wet and dry for the local climate. The NEE of upland forests was typically a sink of CO2, regardless the weather. Though, xeric pine forest was estimated to be a source of CO2 during wet and intermediate year and became a weak sink only in dry year. The NEE of forest-mire transitions ranged between a sink in dry year, while increased stand carbon sequestration could offset the reduced forest floor CO2 emission, and a source in wet year. The NEE of two sparsely forested mires strongly differed. The lawn type mire was balanced around zero and the hummock type mire was relatively strong NEE sink, regardless the weather. Generally, nearly zero N2O emission could not offset the cooling effect of net CH4 sink and net CO2 sink of upland forest and forest-mire transitions. However in sparsely forested mires, with N2O emission also nearly zero, the CH4 emission during wet and intermediate year played important role in turning the net cooling effect of NEE into a net warming. When evaluating GWP of boreal landscapes, undisturbed forest-mire transitions should be regarded as net cooling ecosystems instead of hotspots of net warming.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bluestein, J.; Horgan, S.; Eldridge, M. M.

Relatively small projects for generating electrical power at or near the point of use--distributed generation (DG)--offer unique opportunities for enhancing the U.S. electric system. This report finds that current air quality regulatory practices are inappropriately inhibiting the development of DG through a failure to recognize the environmental benefits offered by DG or by imposing requirements designed for larger systems that are not appropriate to DG systems. The report recommends that air quality regulation be made more efficient and appropriate for DG by establishing national standards for DG equipment. This report also recommends that DG projects be evaluated on a''net'' emissionsmore » basis by being given credit for any emission sources that they displace. Air quality regulation should also recognize the benefits of combined heat and power (CHP).« less

Manganese biogeochemistry in a central Czech Republic catchment

USGS Publications Warehouse

Navratil, T.; Shanley, J.B.; Skrivan, P.; Kram, P.; Mihaljevic, M.; Drahota, P.

2007-01-01

Mn biogeochemistry was studied from 1994 to 2003 in a small forested catchment in the central Czech Republic using the watershed mass balance approach together with measurements of internal stores and fluxes. Mn inputs in bulk deposition were relatively constant during a period of sharply decreasing acidic deposition, suggesting that the Mn source was terrestrial, and not from fossil fuel combustion. Mn inputs in bulk deposition and Mn supplied by weathering each averaged 13 mg m-2 year-1 (26 mg m -2 year-1 total input), whereas Mn export in streamwater and groundwater averaged 43 mg m-2 year-1. Thus an additional Mn source is needed to account for 17 mg m-2 year -1. Internal fluxes and pools of Mn were significantly greater than annual inputs and outputs. Throughfall Mn flux was 70 mg m-2 year-1, litterfall Mn flux was 103 mg m-2 year -1, and Mn net uptake by vegetation was 62 mg m-2 year-1. Large pools of labile or potentially labile Mn were present in biomass and surficial soil horizons. Small leakages from these large pools likely supply the additional Mn needed to close the watershed mass balance. This leakage may reflect an adjustment of the ecosystem to recent changes in atmospheric acidity. ?? 2007 Springer Science+Business Media B.V.

Source Process of the 2007 Niigata-ken Chuetsu-oki Earthquake Derived from Near-fault Strong Motion Data

NASA Astrophysics Data System (ADS)

Aoi, S.; Sekiguchi, H.; Morikawa, N.; Ozawa, T.; Kunugi, T.; Shirasaka, M.

2007-12-01

The 2007 Niigata-ken Chuetsu-oki earthquake occurred on July 16th, 2007, 10:13 JST. We performed a multi- time window linear waveform inversion analysis (Hartzell and Heaton, 1983) to estimate the rupture process from the near fault strong motion data of 14 stations from K-NET, KiK-net, F-net, JMA, and Niigata prefecture. The fault plane for the mainshock has not been clearly determined yet from the aftershock distribution, so that we performed two waveform inversions for north-west dipping fault (Model A) and south-east dipping fault (Model B). Their strike, dip, and rake are set to those of the moment tensor solutions by F-net. Fault plane model of 30 km length by 24 km width is set to cover aftershock distribution within 24 hours after the mainshock. Theoretical Green's functions were calculated by the discrete wavenumber method (Bouchon, 1981) and the R/T matrix method (Kennett, 1983) with the different stratified medium for each station based on the velocity structure including the information form the reflection survey and borehole logging data. Convolution of moving dislocation was introduced to represent the rupture propagation in an each subfault (Sekiguchi et al., 2002). The observed acceleration records were integrated into velocity except of F-net velocity data, and bandpass filtered between 0.1 and 1.0 Hz. We solved least-squared equation to obtain slip amount of each time window on each subfault to minimize squared residual of the waveform fitting between observed and synthetic waveforms. Both models provide moment magnitudes of 6.7. Regarding Model A, we obtained large slip in the south-west deeper part of the rupture starting point, which is close to Kashiwazaki-city. The second or third velocity pulses of observed velocity waveforms seem to be composed of slip from the asperity. Regarding Model B, we obtained large slip in the southwest shallower part of the rupture starting point, which is also close to Kashiwazaki-city. In both models, we found small slip near the rupture starting point, and largest slip at about ten kilometer in the south-west of the rupture starting point with the maximum slip of 2.3 and 2.5 m for Models A and B, respectively. The difference of the residual between observed and synthetic waveforms for both models is not significant, therefore it is difficult to conclude which fault plane is appropriate to explain. The estimated large-slip regions in the inverted source models with the Models A and B are located near the cross point of the two fault plane models, which should have similar radiation pattern. This situation may be one of the reasons why judgment of the fault plane orientation is such difficult. We need careful examinations not only strong motion data but also geodetic data to further explore the fault orientation and the source process of this earthquake.

NetCDF-CF: Supporting Earth System Science with Data Access, Analysis, and Visualization

NASA Astrophysics Data System (ADS)

Davis, E.; Zender, C. S.; Arctur, D. K.; O'Brien, K.; Jelenak, A.; Santek, D.; Dixon, M. J.; Whiteaker, T. L.; Yang, K.

2017-12-01

NetCDF-CF is a community-developed convention for storing and describing earth system science data in the netCDF binary data format. It is an OGC recognized standard with numerous existing FOSS (Free and Open Source Software) and commercial software tools can explore, analyze, and visualize data that is stored and described as netCDF-CF data. To better support a larger segment of the earth system science community, a number of efforts are underway to extend the netCDF-CF convention with the goal of increasing the types of data that can be represented as netCDF-CF data. This presentation will provide an overview and update of work to extend the existing netCDF-CF convention. It will detail the types of earth system science data currently supported by netCDF-CF and the types of data targeted for support by current netCDF-CF convention development efforts. It will also describe some of the tools that support the use of netCDF-CF compliant datasets, the types of data they support, and efforts to extend them to handle the new data types that netCDF-CF will support.

Accounting for between-study variation in incremental net benefit in value of information methodology.

PubMed

Willan, Andrew R; Eckermann, Simon

2012-10-01

Previous applications of value of information methods for determining optimal sample size in randomized clinical trials have assumed no between-study variation in mean incremental net benefit. By adopting a hierarchical model, we provide a solution for determining optimal sample size with this assumption relaxed. The solution is illustrated with two examples from the literature. Expected net gain increases with increasing between-study variation, reflecting the increased uncertainty in incremental net benefit and reduced extent to which data are borrowed from previous evidence. Hence, a trial can become optimal where current evidence is sufficient assuming no between-study variation. However, despite the expected net gain increasing, the optimal sample size in the illustrated examples is relatively insensitive to the amount of between-study variation. Further percentage losses in expected net gain were small even when choosing sample sizes that reflected widely different between-study variation. Copyright © 2011 John Wiley & Sons, Ltd.

Comparison of catch and lake trout bycatch in commercial trap nets and gill nets targeting lake whitefish in northern Lake Huron

USGS Publications Warehouse

Johnson, James E.; Ebener, Mark P.; Gebhardt, Kenneth; Bergstedt, Roger

2004-01-01

We compared seasonal lake whitefish catch rates, lake trout bycatch, and gearinduced lake trout mortality between commercial trap nets and gill nets in north-central Lake Huron. Onboard monitors recorded catches from 260 gill net and 96 trap net lifts from October 1998 through December 1999. Catch rates for lake whitefish were highest in fall for both gear types, reflecting proximity of spawning sites to the study area. Lake whitefish catch rates were also relatively high in spring but low in both gear types in summer. Lake trout were the principal bycatch species in both gears. The lake trout bycatch was lowest in both gear types in fall, highest in gill nets in spring, and highest in trap nets in summer. The ratio of lake trout to legal whitefish (the target species) was highest in summer and lowest in fall in both gear types. The high lake trout ratio in summer was due principally to low catch rates of lake whitefish. All but 3 of 186 live lake trout removed from trap net pots survived for at least two days of observation in laboratory tanks. Therefore, we estimated that post-release survival of trap netted lake trout that had not been entangled in the mesh was 98.4%. In addition, we accounted for stress-induced mortality for lake trout that were live at capture but entangled in the mesh of either gear type. Resulting estimates of lake trout survival were higher in trap nets (87.8%) than in gill nets (39.6%). The number of lake trout killed per lift was highest during summer in trap nets and during spring in gill nets. In trap nets, 85% of dead lake trout were observed to be entangled in the mesh of the pot or tunnels. Survival rates of lake trout in gill nets were higher in our study than reported by others, probably because our nets were hand lifted in a small boat. Our trap net-induced mortality estimates on lake trout were higher than those reported by others because we adjusted our estimates to account for post-release mortality caused by handling and injury. Studies such as ours should prove useful to managers developing harvest allocation options that are consistent with the need to protect nontarget populations. For example, applying our seasonal lake trout-whitefish catch ratios to a hypothetical small-boat gill net fishery, the lake trout bycatch from harvest of 100,000 kg of whitefish would equal the estimated lake trout production available for harvest in the study area for year 2002. The two trap net fisheries may have incidentally killed half this number of lake trout annually from 1995-99. Bycatch estimates are also important inputs to catch-at-age decision models used in developing rehabilitation and harvest strategies for target and bycatch species.

Impact of icebergs on net primary productivity in the Southern Ocean

NASA Astrophysics Data System (ADS)

Wu, Shuang-Ye; Hou, Shugui

2017-03-01

Productivity in the Southern Ocean (SO) is iron-limited, and supply of iron dissolved from aeolian dust is believed to be the main source from outside the marine environment. However, recent studies show that icebergs could provide a comparable amount of bioavailable iron to the SO as aeolian dust. In addition, small-scale areal studies suggest increased concentrations of chlorophyll, krill, and seabirds surrounding icebergs. Based on previous research, this study aims to examine whether iceberg occurrence has a significant impact on marine productivity at the scale of the SO, using remote sensing data of iceberg occurrences and ocean net primary productivity (NPP) covering the period 2002-2014. The impacts of both large and small icebergs are examined in four major ecological zones of the SO: the continental shelf zone (CSZ), the seasonal ice zone (SIZ), the permanent open ocean zone (POOZ), and the polar front zone (PFZ). We found that the presence of icebergs is associated with elevated levels of NPP, but the differences vary in different zones. Grid cells with small icebergs on average have higher NPP than other cells in most iron-deficient zones: 21 % higher for the SIZ, 16 % for the POOZ, and 12 % for the PFZ. The difference is relatively small in the CSZ where iron is supplied from meltwater and sediment input from the continent. In addition, NPP of grid cells adjacent to large icebergs on average is 10 % higher than that of control cells in the vicinity. The difference is larger at higher latitudes, where most large icebergs are concentrated. From 1992 to 2014, there is a significant increasing trend for both small and large icebergs. The increase was most rapid in the early 2000s and has leveled off since then. As the climate continues to warm, the Antarctic Ice Sheet is expected to experience increased mass loss as a whole, which could lead to more icebergs in the region. Based on our study, this could result in a higher level of NPP in the SO as a whole, providing a possible negative feedback for global warming in near future.

The cost of a small membrane bioreactor.

PubMed

Lo, C H; McAdam, E; Judd, S

2015-01-01

The individual cost contributions to the mechanical components of a small membrane bioreactor (MBR) (100-2,500 m3/d flow capacity) are itemised and collated to generate overall capital and operating costs (CAPEX and OPEX) as a function of size. The outcomes are compared to those from previously published detailed cost studies provided for both very small containerised plants (<40 m3/day capacity) and larger municipal plants (2,200-19,000 m3/d). Cost curves, as a function of flow capacity, determined for OPEX, CAPEX and net present value (NPV) based on the heuristic data used indicate a logarithmic function for OPEX and a power-based one for the CAPEX. OPEX correlations were in good quantitative agreement with those reported in the literature. Disparities in the calculated CAPEX trend compared with reported data were attributed to differences in assumptions concerning cost contributions. More reasonable agreement was obtained with the reported membrane separation component CAPEX data from published studies. The heuristic approach taken appears appropriate for small-scale MBRs with minimal costs associated with installation. An overall relationship of net present value=(a tb)Q(-c lnt+d) was determined for the net present value where a=1.265, b=0.44, c=0.00385 and d=0.868 according to the dataset employed for the analysis.

Gamma-sky.net: Portal to the gamma-ray sky

NASA Astrophysics Data System (ADS)

Voruganti, Arjun; Deil, Christoph; Donath, Axel; King, Johannes

2017-01-01

http://gamma-sky.net is a novel interactive website designed for exploring the gamma-ray sky. The Map View portion of the site is powered by the Aladin Lite sky atlas, providing a scalable survey image tesselated onto a three-dimensional sphere. The map allows for interactive pan and zoom navigation as well as search queries by sky position or object name. The default image overlay shows the gamma-ray sky observed by the Fermi-LAT gamma-ray space telescope. Other survey images (e.g. Planck microwave images in low/high frequency bands, ROSAT X-ray image) are available for comparison with the gamma-ray data. Sources from major gamma-ray source catalogs of interest (Fermi-LAT 2FHL, 3FGL and a TeV source catalog) are overlaid over the sky map as markers. Clicking on a given source shows basic information in a popup, and detailed pages for every source are available via the Catalog View component of the website, including information such as source classification, spectrum and light-curve plots, and literature references. We intend for gamma-sky.net to be applicable for both professional astronomers as well as the general public. The website started in early June 2016 and is being developed as an open-source, open data project on GitHub (https://github.com/gammapy/gamma-sky). We plan to extend it to display more gamma-ray and multi-wavelength data. Feedback and contributions are very welcome!

Net current control device. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fugate, D.; Cooper, J.H.

1998-11-01

Net currents generally result in elevated magnetic fields because the alternate paths are distant from the circuit conductors. Investigations have shown that one of the primary sources of power frequency magnetic fields in residential buildings is currents that return to their source via paths other than the neutral conductors. As part of EPRI`s Magnetic Field Shielding Project, ferromagnetic devices, called net current control (NCC) devices, were developed and tested for use in reducing net currents on electric power cables and the resulting magnetic fields. Applied to a residential service drop, an NCC device reduces net current by forcing current offmore » local non-utility ground paths, and back onto the neutral conductor. Circuit models and basic design equations for the NCC concept were developed, and proof-of-principles tests were carried out on an actual residence with cooperation from the local utility. After proving the basic concepts, three prototype NCC devices were built and tested on a simulated neighborhood power system. Additional prototypes were built for testing by interested EPRI utility members. Results have shown that the NCC prototypes installed on residential service drops reduce net currents to milliampere levels with compromising the safety of the ground system. Although the focus was on application to residential service cables, the NCC concept is applicable to single-phase and three-phase distribution systems as well.« less

CGBayesNets: Conditional Gaussian Bayesian Network Learning and Inference with Mixed Discrete and Continuous Data

PubMed Central

Weiss, Scott T.

2014-01-01

Bayesian Networks (BN) have been a popular predictive modeling formalism in bioinformatics, but their application in modern genomics has been slowed by an inability to cleanly handle domains with mixed discrete and continuous variables. Existing free BN software packages either discretize continuous variables, which can lead to information loss, or do not include inference routines, which makes prediction with the BN impossible. We present CGBayesNets, a BN package focused around prediction of a clinical phenotype from mixed discrete and continuous variables, which fills these gaps. CGBayesNets implements Bayesian likelihood and inference algorithms for the conditional Gaussian Bayesian network (CGBNs) formalism, one appropriate for predicting an outcome of interest from, e.g., multimodal genomic data. We provide four different network learning algorithms, each making a different tradeoff between computational cost and network likelihood. CGBayesNets provides a full suite of functions for model exploration and verification, including cross validation, bootstrapping, and AUC manipulation. We highlight several results obtained previously with CGBayesNets, including predictive models of wood properties from tree genomics, leukemia subtype classification from mixed genomic data, and robust prediction of intensive care unit mortality outcomes from metabolomic profiles. We also provide detailed example analysis on public metabolomic and gene expression datasets. CGBayesNets is implemented in MATLAB and available as MATLAB source code, under an Open Source license and anonymous download at http://www.cgbayesnets.com. PMID:24922310

CGBayesNets: conditional Gaussian Bayesian network learning and inference with mixed discrete and continuous data.

PubMed

McGeachie, Michael J; Chang, Hsun-Hsien; Weiss, Scott T

2014-06-01

Bayesian Networks (BN) have been a popular predictive modeling formalism in bioinformatics, but their application in modern genomics has been slowed by an inability to cleanly handle domains with mixed discrete and continuous variables. Existing free BN software packages either discretize continuous variables, which can lead to information loss, or do not include inference routines, which makes prediction with the BN impossible. We present CGBayesNets, a BN package focused around prediction of a clinical phenotype from mixed discrete and continuous variables, which fills these gaps. CGBayesNets implements Bayesian likelihood and inference algorithms for the conditional Gaussian Bayesian network (CGBNs) formalism, one appropriate for predicting an outcome of interest from, e.g., multimodal genomic data. We provide four different network learning algorithms, each making a different tradeoff between computational cost and network likelihood. CGBayesNets provides a full suite of functions for model exploration and verification, including cross validation, bootstrapping, and AUC manipulation. We highlight several results obtained previously with CGBayesNets, including predictive models of wood properties from tree genomics, leukemia subtype classification from mixed genomic data, and robust prediction of intensive care unit mortality outcomes from metabolomic profiles. We also provide detailed example analysis on public metabolomic and gene expression datasets. CGBayesNets is implemented in MATLAB and available as MATLAB source code, under an Open Source license and anonymous download at http://www.cgbayesnets.com.

Quantifying the Contributions of Environmental Parameters to Ceres Surface Net Radiation Error in China

NASA Astrophysics Data System (ADS)

Pan, X.; Yang, Y.; Liu, Y.; Fan, X.; Shan, L.; Zhang, X.

2018-04-01

Error source analyses are critical for the satellite-retrieved surface net radiation (Rn) products. In this study, we evaluate the Rn error sources in the Clouds and the Earth's Radiant Energy System (CERES) project at 43 sites from July in 2007 to December in 2007 in China. The results show that cloud fraction (CF), land surface temperature (LST), atmospheric temperature (AT) and algorithm error dominate the Rn error, with error contributions of -20, 15, 10 and 10 W/m2 (net shortwave (NSW)/longwave (NLW) radiation), respectively. For NSW, the dominant error source is algorithm error (more than 10 W/m2), particularly in spring and summer with abundant cloud. For NLW, due to the high sensitivity of algorithm and large LST/CF error, LST and CF are the largest error sources, especially in northern China. The AT influences the NLW error large in southern China because of the large AT error in there. The total precipitable water has weak influence on Rn error even with the high sensitivity of algorithm. In order to improve Rn quality, CF and LST (AT) error in northern (southern) China should be decreased.

Recent evolution of China's virtual water trade: analysis of selected crops and considerations for policy

NASA Astrophysics Data System (ADS)

Shi, J.; Liu, J.; Pinter, L.

2014-04-01

China has dramatically increased its virtual water import over recent years. Many studies have focused on the quantity of traded virtual water, but very few go into analysing geographic distribution and the properties of China's virtual water trade network. This paper provides a calculation and analysis of the crop-related virtual water trade network of China based on 27 major primary crops between 1986 and 2009. The results show that China is a net importer of virtual water from water-abundant areas of North America and South America, and a net virtual water exporter to water-stressed areas of Asia, Africa, and Europe. Virtual water import is far larger than virtual water export, and in both import and export a small number of trade partners control the supply chain. Grain crops are the major contributors to virtual water trade, and among grain crops, soybeans, mostly imported from the US, Brazil and Argentina, are the most significant. In order to mitigate water scarcity and secure the food supply, virtual water should actively be incorporated into national water management strategies. And the sources of virtual water import need to be further diversified to reduce supply chain risks and increase resilience.

Neural network technologies

NASA Technical Reports Server (NTRS)

Villarreal, James A.

1991-01-01

A whole new arena of computer technologies is now beginning to form. Still in its infancy, neural network technology is a biologically inspired methodology which draws on nature's own cognitive processes. The Software Technology Branch has provided a software tool, Neural Execution and Training System (NETS), to industry, government, and academia to facilitate and expedite the use of this technology. NETS is written in the C programming language and can be executed on a variety of machines. Once a network has been debugged, NETS can produce a C source code which implements the network. This code can then be incorporated into other software systems. Described here are various software projects currently under development with NETS and the anticipated future enhancements to NETS and the technology.

Combined fast multipole-QR compression technique for solving electrically small to large structures for broadband applications

NASA Technical Reports Server (NTRS)

Jandhyala, Vikram (Inventor); Chowdhury, Indranil (Inventor)

2011-01-01

An approach that efficiently solves for a desired parameter of a system or device that can include both electrically large fast multipole method (FMM) elements, and electrically small QR elements. The system or device is setup as an oct-tree structure that can include regions of both the FMM type and the QR type. An iterative solver is then used to determine a first matrix vector product for any electrically large elements, and a second matrix vector product for any electrically small elements that are included in the structure. These matrix vector products for the electrically large elements and the electrically small elements are combined, and a net delta for a combination of the matrix vector products is determined. The iteration continues until a net delta is obtained that is within predefined limits. The matrix vector products that were last obtained are used to solve for the desired parameter.

49 CFR 173.171 - Smokeless powder for small arms.

Code of Federal Regulations, 2010 CFR

2010-10-01

... boxes meeting the Packing Group I performance level, provided all inside containers are packed to prevent shifting and the net weight of smokeless powder in any one box does not exceed 7.3 kg (16 pounds...) net mass in: (1) One rail car, motor vehicle, or cargo-only aircraft; or (2) One freight container on...

49 CFR 173.171 - Smokeless powder for small arms.

Code of Federal Regulations, 2014 CFR

2014-10-01

... fiberboard boxes meeting the Packing Group I performance level, provided all inside containers are packed to prevent shifting and the net weight of smokeless powder in any one box does not exceed 7.3 kg (16 pounds... 45.4 kg (100 pounds) net mass in: (1) One rail car, motor vehicle, or cargo-only aircraft; or (2) One...

49 CFR 173.171 - Smokeless powder for small arms.

Code of Federal Regulations, 2011 CFR

2011-10-01

... boxes meeting the Packing Group I performance level, provided all inside containers are packed to prevent shifting and the net weight of smokeless powder in any one box does not exceed 7.3 kg (16 pounds...) net mass in: (1) One rail car, motor vehicle, or cargo-only aircraft; or (2) One freight container on...

49 CFR 173.171 - Smokeless powder for small arms.

Code of Federal Regulations, 2012 CFR

2012-10-01

... boxes meeting the Packing Group I performance level, provided all inside containers are packed to prevent shifting and the net weight of smokeless powder in any one box does not exceed 7.3 kg (16 pounds...) net mass in: (1) One rail car, motor vehicle, or cargo-only aircraft; or (2) One freight container on...

Origin of the net magnetic moment in LaCoO 3

DOE PAGES

Kaminsky, G.; Belanger, David P.; Ye, Feng; ...

2018-01-19

We use polarized neutron scattering to characterize the Bragg scattering intensity below T C=89.5 K at the (1,0,0) pseudocubic nuclear Bragg point of LaCoO 3. Upon cooling in a field (FC), a net magnetic moment is apparent in Bragg scattering intensity, just as it was in previous magnetization measurements. Critical behavior associated with the net moment near T C upon cooling in small applied fields rapidly rounds with increasing field strength. We show, using a mean-field calculation, that this net moment can develop in a metastable state that forms upon FC, even when all the interactions in the system aremore » antiferromagnetic.« less

Agile convolutional neural network for pulmonary nodule classification using CT images.

PubMed

Zhao, Xinzhuo; Liu, Liyao; Qi, Shouliang; Teng, Yueyang; Li, Jianhua; Qian, Wei

2018-04-01

To distinguish benign from malignant pulmonary nodules using CT images is critical for their precise diagnosis and treatment. A new Agile convolutional neural network (CNN) framework is proposed to conquer the challenges of a small-scale medical image database and the small size of the nodules, and it improves the performance of pulmonary nodule classification using CT images. A hybrid CNN of LeNet and AlexNet is constructed through combining the layer settings of LeNet and the parameter settings of AlexNet. A dataset with 743 CT image nodule samples is built up based on the 1018 CT scans of LIDC to train and evaluate the Agile CNN model. Through adjusting the parameters of the kernel size, learning rate, and other factors, the effect of these parameters on the performance of the CNN model is investigated, and an optimized setting of the CNN is obtained finally. After finely optimizing the settings of the CNN, the estimation accuracy and the area under the curve can reach 0.822 and 0.877, respectively. The accuracy of the CNN is significantly dependent on the kernel size, learning rate, training batch size, dropout, and weight initializations. The best performance is achieved when the kernel size is set to [Formula: see text], the learning rate is 0.005, the batch size is 32, and dropout and Gaussian initialization are used. This competitive performance demonstrates that our proposed CNN framework and the optimization strategy of the CNN parameters are suitable for pulmonary nodule classification characterized by small medical datasets and small targets. The classification model might help diagnose and treat pulmonary nodules effectively.

Attribution of Net Carbon Change by Disturbance Type across Forest Lands of the Continental United States

NASA Astrophysics Data System (ADS)

Hagen, S. C.; Harris, N.; Saatchi, S. S.; Domke, G. M.; Woodall, C. W.; Pearson, T.

2016-12-01

We generated spatially comprehensive maps of carbon stocks and net carbon changes from US forestlands between 2005 and 2010 and attributed the changes to natural and anthropogenic processes. The prototype system created to produce these maps is designed to assist with national GHG inventories and support decisions associated with land management. Here, we present the results and methodological framework of our analysis. In summary, combining estimates of net C losses and gains results in net carbon change of 269±49 Tg C yr-1 (sink) in the coterminous US forest land, with carbon loss from harvest acting as the predominent source process.

Safety analysis of discrete event systems using a simplified Petri net controller.

PubMed

Zareiee, Meysam; Dideban, Abbas; Asghar Orouji, Ali

2014-01-01

This paper deals with the problem of forbidden states in discrete event systems based on Petri net models. So, a method is presented to prevent the system from entering these states by constructing a small number of generalized mutual exclusion constraints. This goal is achieved by solving three types of Integer Linear Programming problems. The problems are designed to verify the constraints that some of them are related to verifying authorized states and the others are related to avoiding forbidden states. The obtained constraints can be enforced on the system using a small number of control places. Moreover, the number of arcs related to these places is small, and the controller after connecting them is maximally permissive. © 2013 ISA. Published by Elsevier Ltd. All rights reserved.

Air-sea Exchange of Polycyclic Aromatic Hydrocarbons (PAHs), Polychlorinated Biphenyls (PCBs), Organochlorine Pesticides (OCPs) and Polybrominated Diphenyl Ethers (PBDEs) in the Mediterranean Sea

NASA Astrophysics Data System (ADS)

Lammel, G. P.; Heil, A.; Kukucka, P.; Meixner, F. X.; Mulder, M. D.; Prybilova, P.; Prokes, R.; Rusina, T. S.; Song, G. Z.; Vrana, B.

2015-12-01

The marine atmospheric environment is a receptor for persistent organic pollutants (POPs) which are advected from sources on land, primary, such as biomass burning by-products (PAHs, dioxins), and secondary, such as volatilization from contaminated soils (PCBs, pesticides). Primary sources do not exist in the marine environment, except for PAHs (ship engines) but following previous atmospheric deposition, the sea surface may turn to a secondary source by reversal of diffusive air-sea mass exchange. No monitoring is in place. We studied the vertical fluxes of a wide range of primary and secondary emitted POPs based on measurements in air and surface seawater at a remote coastal site in the eastern Mediterranean (2012). To this end, silicon rubbers were used as passive water samplers, vertical concentration gradients were determined in air and fluxes were quantified based on Eddy covariance. Diffusive air-sea exchange fluxes of hexachlorocyclohexanes (HCHs) and semivolatile PAHs were found close to phase equilibrium, except one PAH, retene, a wood burning tracer, was found seasonally net-volatilisational. Some PCBs, p,p'-DDE, penta- and hexachlorobenzene (PeCB, HCB) were mostly net-depositional, while PBDEs were net-volatilizational. Fluxes determined at a a remote coastal site ranged -33 - +2.4 µg m-2 d-1 for PAHs and -4.0 - +0.3 µg m-2 d-1for halogenated compounds (< 0 means net-deposition, > 0 means net-volatilization). It is concluded that nowadays in open seas more pollutants are undergoing reversal of the direction of air-sea exchange. Recgional fire activity records in combination with box model simulations suggest that deposition of retene during summer is followed by a reversal of air-sea exchange. The seawater surface as secondary source of pollution should be assessed based on flux measurements across seasons and over longer time periods.

Community Intercomparison Suite (CIS) v1.4.0: a tool for intercomparing models and observations

NASA Astrophysics Data System (ADS)

Watson-Parris, Duncan; Schutgens, Nick; Cook, Nicholas; Kipling, Zak; Kershaw, Philip; Gryspeerdt, Edward; Lawrence, Bryan; Stier, Philip

2016-09-01

The Community Intercomparison Suite (CIS) is an easy-to-use command-line tool which has been developed to allow the straightforward intercomparison of remote sensing, in situ and model data. While there are a number of tools available for working with climate model data, the large diversity of sources (and formats) of remote sensing and in situ measurements necessitated a novel software solution. Developed by a professional software company, CIS supports a large number of gridded and ungridded data sources "out-of-the-box", including climate model output in NetCDF or the UK Met Office pp file format, CloudSat, CALIOP (Cloud-Aerosol Lidar with Orthogonal Polarization), MODIS (MODerate resolution Imaging Spectroradiometer), Cloud and Aerosol CCI (Climate Change Initiative) level 2 satellite data and a number of in situ aircraft and ground station data sets. The open-source architecture also supports user-defined plugins to allow many other sources to be easily added. Many of the key operations required when comparing heterogenous data sets are provided by CIS, including subsetting, aggregating, collocating and plotting the data. Output data are written to CF-compliant NetCDF files to ensure interoperability with other tools and systems. The latest documentation, including a user manual and installation instructions, can be found on our website (http://cistools.net). Here, we describe the need which this tool fulfils, followed by descriptions of its main functionality (as at version 1.4.0) and plugin architecture which make it unique in the field.

An electronic consumer health library: NetWellness.

PubMed Central

Guard, R; Haag, D; Kaya, B; Marine, S; Morris, T; Schick, L; Shoemaker, S

1996-01-01

NetWellness is a community-based, consumer-defined grant program supporting the delivery of electronic health information to rural residents of southern Ohio and urban and suburban communities in the Greater Cincinnati tri-state region. NetWellness is a collaboratively developed and publicly and privately funded demonstration project. Information is delivered via ISDN, standard dial, dedicated network connections, and the Internet. TriState Online (Greater Cincinnati's Free-Net) and other southern Ohio Free-Nets are key access points in the larger project communities. The other access points are more than forty workstations distributed at public sites throughout the project's primary geographical area. Design strengths and limitations, training initiatives, technical issues, and the project's impact on medical librarianship are examined in this paper. Also discussed are ways of determining community needs and interest, building political alliances, finding and developing funding sources, and overcoming technical obstacles. NetWellness's Internet address is: http:@www.netwellness.org. PMID:8913548

Greenhouse Gas and Carbon Profile of the U.S. Forest Products Industry Value Chain

PubMed Central

2010-01-01

A greenhouse gas and carbon accounting profile was developed for the U.S. forest products industry value chain for 1990 and 2004−2005 by examining net atmospheric fluxes of CO2 and other greenhouse gases (GHGs) using a variety of methods and data sources. Major GHG emission sources include direct and indirect (from purchased electricity generation) emissions from manufacturing and methane emissions from landfilled products. Forest carbon stocks in forests supplying wood to the industry were found to be stable or increasing. Increases in the annual amounts of carbon removed from the atmosphere and stored in forest products offset about half of the total value chain emissions. Overall net transfers to the atmosphere totaled 91.8 and 103.5 TgCO2-eq. in 1990 and 2005, respectively, although the difference between these net transfers may not be statistically significant. Net transfers were higher in 2005 primarily because additions to carbon stored in forest products were less in 2005. Over this same period, energy-related manufacturing emissions decreased by almost 9% even though forest products output increased by approximately 15%. Several types of avoided emissions were considered separately and were collectively found to be notable relative to net emissions. PMID:20355695

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jorgenson, Jennie; Mehos, Mark; Denholm, Paul

Concentrated solar power with thermal energy storage (CSP-TES) is a unique source of renewable energy in that its energy can be shifted over time and it can provide the electricity system with dependable generation capacity. In this study, we provide a framework to determine if the benefits of CSP-TES (shiftable energy and the ability to provide firm capacity) exceed the benefits of PV and firm capacity sources such as long-duration battery storage or conventional natural gas combustion turbines (CTs). The results of this study using current capital cost estimates indicate that a combination of PV and conventional gas CTs providesmore » a lower net cost compared to CSP-TES and PV with batteries. Some configurations of CSP-TES have a lower net cost than PV with batteries for even the lowest battery cost estimate. Using projected capital cost targets, however, some configurations of CSP-TES have a lower net cost than PV with either option for even the lowest battery cost estimate. The net cost of CSP-TES varies with configuration, and lower solar multiples coupled with less storage are more attractive at current cost levels, due to high component costs. However, higher solar multiples show a lower net cost using projected future costs for heliostats and thermal storage materials.« less

Estimating the Temporal Domain when the Discount of the Net Evaporation Term Affects the Resulting Net Precipitation Pattern in the Moisture Budget Using a 3-D Lagrangian Approach

PubMed Central

Castillo, Rodrigo; Nieto, Raquel; Drumond, Anita; Gimeno, Luis

2014-01-01

The Lagrangian FLEXPART model has been used during the last decade to detect moisture sources that affect the climate in different regions of the world. While most of these studies provided a climatological perspective on the atmospheric branch of the hydrological cycle in terms of precipitation, none assessed the minimum temporal domain for which the climatological approach is valid. The methodology identifies the contribution of humidity to the moisture budget in a region by computing the changes in specific humidity along backward (or forward) trajectories of air masses over a period of ten days beforehand (afterwards), thereby allowing the calculation of monthly, seasonal and annual averages. The current study calculates as an example the climatological seasonal mean and variance of the net precipitation for regions in which precipitation exceeds evaporation (E-P<0) for the North Atlantic moisture source region using different time periods, for winter and summer from 1980 to 2000. The results show that net evaporation (E-P>0) can be discounted after when the integration of E-P is done without affecting the general net precipitation patterns when it is discounted in a monthly or longer time scale. PMID:24893002

Partitioning of ocean and land uptake of CO2 as inferred by delta C-13 measurements from the NOAA Climate Monitoring and Diagnostics Laboratory Global Air Sampling Network

NASA Technical Reports Server (NTRS)

Ciais, Philippe; Tans, Pieter P.; White, James W. C.; Trolier, Michael; Francey, Roger J.; Berry, Joe A.; Randall, David R.; Sellers, Piers J.; Collatz, James G.; Schimel, David S.

1995-01-01

Using delta C-13 measurements in atmospheric CO2 from a cooperative global air sampling network, we determined the partitioning of the net uptake of CO2 between ocean and land as a function of latitude and time. The majority of delta C-13 measurements were made at the Institute of Arctic and Alpine Research (INSTAAR) of the University of Colorado. We perform an inverse deconvolution of both CO2 and delta C-13 observations, using a two-dimensional model of atmospheric transport. Also, the discrimination against C-13 by plant photosynthesis, as a function of latitude and time, is calculated from global runs of the simple biosphere (SiB) model. Uncertainty due to the longitudinal structure of the data, which is not represented by the model, is studied through a bootstrap analysis by adding and omitting measurement sites. The resulting error estimates for our inferred sources and sinks are of the order of 1 GTC (1 GTC = 10(exp 15) gC). Such error bars do not reflect potential systematic errors arising from our estimates of the isotopic disequilibria between the atmosphere and the oceans and biosphere, which are estimated in a separate sensitivity analysis. With respect to global totals for 1992 we found that 3.2 GTC of carbon dissolved into the ocean and that 1.5 GTC were sequestered by land ecosystems. Northern hemisphere ocean gyres north of 15 deg N absorbed 2.7 GTC. The equatorial oceans between 10 deg S and 10 deg N were a net source to the atmosphere of 0.9 GTC. We obtained a sink of 1.6 GTC in southern ocean gyres south of 20 deg S, although the deconvolution is poorly constrained by sparse data coverage at high southern latitudes. The seasonal uptake of CO2 in the northern gyres appears to be correlated with a bloom of phytoplankton in surface waters. On land, northern temperate and boreal ecosystems between 35 deg N and 65 deg N were found to be a major sink of CO2 in 1992, as large as 3.5 GTC. Northern tropical ecosystems (equator-30 deg N) appear to be a net source to the source to the atmosphere of 2 GTC which could reflect biomass burning. A small sink, 0.3 GTC, was inferred for southern tropical ecosystems (30 deg S-equator).

The New Tools of the Trade: 48 Essential Net Resources for Librarians.

ERIC Educational Resources Information Center

Todaro, Julie

1996-01-01

Describes 48 Web sites, listservs, and search engines for librarians serving children and youth in the following categories: professional topics; networking opportunities; literature; libraries; the "Net"; education and general resources; and resources on children and youth. Lists 11 ways to use the internet as a source of professional…

Green Net Regional Product for the San Luis Basin, Colorado: An Economic Measure of Regional Sustainability

EPA Science Inventory

This paper presents the data sources and methodology used to estimate Green Net Regional Product (GNRP), a green accounting approach, for the San Luis Basin (SLB). GNRP is equal to aggregate consumption minus the depreciation of man-made and natural capital. We measure the move...

MASTER Net: optical transients detection

NASA Astrophysics Data System (ADS)

Pogrosheva, T.; Gress, O.; Vladimirov, V.; Lipunov, V.; Rebolo, R.; Serra-Ricart, M.; Podesta, R.; Podesta, F.; Francile, C.; Levato, H.; Saffe, C.; Gorbovskoy, E.; Tiurina, N.; Kornilov, V.; Balanutsa, P.; Kuznetsov, A.; Gorbunov, I.; Zimnukhov, D.; Chazov, V.; Vlasenko, D.; Shumkov, V.; Senik, V.; Kuvshinov, D.; Gabovich, A.; Yurkov, V.

2018-05-01

MASTER-OAFA auto-detection system ( Lipunov et al., "MASTER Global Robotic Net",Advances in Astronomy, 2010, 30L ) discovered OT source at (RA, Dec) = 17h 01m 47.31s +05d 45m 40.1s on 2018-05-06.23063 UT. The OT unfiltered magnitude is 17.4m (mlim=18.0m).

Estimating Green Net National Product for Puerto Rico: An Economic Measure of Sustainability (Journal article)

EPA Science Inventory

This paper presents the data sources and methodology used to estimate Green Net National Product (GNNP), an economic metric of sustainability, for Puerto Rico. Using the change in GNNP as a one-sided test of weak sustainability (i.e., positive growth in GNNP is not enough to show...

CAMUS: Automatically Mapping Cyber Assets to Mission and Users (PREPRINT)

DTIC Science & Technology

2009-10-01

which machines regularly use a particular mail server. Armed with these basic data sources – LDAP, NetFlow traffic and user logs – fuselets were created... NetFlow traffic used in the demonstration has over ten thousand unique IP Addresses and is over one gigabyte in size. A number of high performance

Impact of seasonality on the nutrient concentrations in Gautami-Godavari Estuarine Mangrove Complex, Andhra Pradesh, India.

PubMed

Rao, Karuna; Priya, Namrata; Ramanathan, A L

2018-04-01

Spatiotemporal variations of dissolved nutrients were studied along Gautami-Godavari mangrove ecosystem to delineate their sources and fate. Average values of nitrate (NO 3 - ), dissolved silica (DSi) and phosphate (PO 4 3- ) is 2.09 mg/l, 12.7 mg/l and 0.16 mg/l in wet season and 0.47 mg/l, 6.96 mg/l and 0.29 mg/l in dry season respectively. In wet season river discharge has significant influence on NO 3 - and DSi. In dry season, NO 3 - and PO 4 3- are controlled by groundwater discharge, benthic exchange and various in situ processes owing to sediment redox condition. Mixing model shows net addition of phosphate in Coringa mangroves (95%) and Lower estuary (13%) and net removal of nitrate (24.79%) in Coringa mangrove and in estuary (58.9%). Thus present mangrove acts as net source for phosphate and net sink for nitrate and DSi. Nutrient ratio shows seasonal switching between potential Phosphorus and Nitrogen limitation in wet and dry season respectively. Copyright © 2018 Elsevier Ltd. All rights reserved.

Organochlorine pesticides in soils of Mexico and the potential for soil-air exchange.

PubMed

Wong, Fiona; Alegria, Henry A; Bidleman, Terry F

2010-03-01

The spatial distribution of organochlorine pesticides (OCs) in soils and their potential for soil-air exchange was examined. The most prominent OCs were the DDTs (Geometric Mean, GM=1.6 ng g(-1)), endosulfans (0.16 ng g(-1)), and toxaphenes (0.64 ng g(-1)). DDTs in soils of southern Mexico showed fresher signatures with higher FDDTe=p,p'-DDT/(p,p'-DDT+p,p'-DDE) and more racemic o,p'-DDT, while the signatures in the central and northern part of Mexico were more indicative of aged residues. Soil-air fugacity fractions showed that some soils are net recipients of DDTs from the atmosphere, while other soils are net sources. Toxaphene profiles in soils and air showed depletion of Parlar 39 and 42 which suggests that soil is the source to the atmosphere. Endosulfan was undergoing net deposition at most sites as it is a currently used pesticide. Other OCs showed wide variability in fugacity, suggesting a mix of net deposition and volatilization. Copyright (c) 2009 Elsevier Ltd. All rights reserved.

Is Forest Ground and Soil a Net Source or Sink for HONO?

NASA Astrophysics Data System (ADS)

Kim, T.; Kim, K.; Zhou, X.

2017-12-01

Ambient measurements and chamber experiments were conducted at the PROPHET site during the PROPHET-AMOS 2016 field campaign, to investigate the exchange of nitrous acid (HONO) between the forest ground and the atmosphere. HONO concentrations measured at 1.3 m and 10 cm above the ground surface consistently showed positive gradients with height, suggesting that the ground surface was a net sink for HONO. The HONO concentration gradients were significantly more pronounced during rainy and foggy periods than during dry periods, indicating an enhancement of HONO deposition onto the wet ground surface. Significant loss of HONO from the gas phase to the ground surface in an open-bottom chamber supports the argument that forest ground is a net HONO sink via deposition. Despite the ground surface was not a net HONO source, HONO was found to accumulate in the atmosphere within the forest canopy during the first half of the night. Heterogeneous reactions of NO2 on the surfaces of tree trunks and branches is proposed to be responsible for the observed nighttime HONO production.

Why is there net surface heating over the Antarctic Circumpolar Current?

NASA Astrophysics Data System (ADS)

Czaja, Arnaud; Marshall, John

2015-05-01

Using a combination of atmospheric reanalysis data, climate model outputs and a simple model, key mechanisms controlling net surface heating over the Southern Ocean are identified. All data sources used suggest that, in a streamline-averaged view, net surface heating over the Antarctic Circumpolar Current (ACC) is a result of net accumulation of solar radiation rather than a result of heat gain through turbulent fluxes (the latter systematically cool the upper ocean). It is proposed that the fraction of this net radiative heat gain realized as net ACC heating is set by two factors. First, the sea surface temperature at the southern edge of the ACC. Second, the relative strength of the negative heatflux feedbacks associated with evaporation at the sea surface and advection of heat by the residual flow in the oceanic mixed layer. A large advective feedback and a weak evaporative feedback maximize net ACC heating. It is shown that the present Southern Ocean and its circumpolar current are in this heating regime.

Marine fisheries in Tanzania.

PubMed

Jiddawi, Narriman S; Ohman, Marcus C

2002-12-01

Fishery resources are a vital source of food and make valuable economic contributions to the local communities involved in fishery activities along the 850 km stretch of the Tanzania coastline and numerous islands. Small-scale artisanal fishery accounts for the majority of fish catch produced by more than 43 000 fishermen in the country, mainly operating in shallow waters within the continental shelf, using traditional fishing vessels including small boats, dhows, canoes, outrigger canoes and dinghys. Various fishing techniques are applied using uncomplicated passive fishing gears such as basket traps, fence traps, nets as well as different hook and line techniques. Species composition and size of the fish varies with gear type and location. More than 500 species of fish are utilized for food with reef fishes being the most important category including emperors, snappers, sweetlips, parrotfish, surgeonfish, rabbitfish, groupers and goatfish. Most of the fish products are used for subsistence purposes. However, some are exported. Destructive fishing methods such as drag nets and dynamite fishing pose a serious problem as they destroy important habitats for fish and other organisms, and there is a long-term trend of overharvested fishery resources. However, fishing pressure varies within the country as fishery resources are utilized in a sustainable manner in some areas. For this report more than 340 references about Tanzanian fishery and fish ecology were covered. There are many gaps in terms of information needed for successful fishery management regarding both basic and applied research. Most research results have been presented as grey literature (57%) with limited distribution; only one-fifth were scientific publications in international journals.

Clinicopathological Features of Intraductal Pancreatic Neuroendocrine Tumors.

PubMed

Chang, Xiao-Yan; Jia, Cong-Wei; Meng, Yun-Xiao; Chen, Jie

2016-10-10

Objective To evaluate the clinical and pathologic characteristics of intraductal pancreatic neuroendocrine tumors (PanNETs). Methods Four cases of intraductal PanNETs were studied by light microscopy and immunohistochemistry with the analysis of morphologic features and review of relevant literatures. Results Two female patients and two male patients aged 41- 58 years were enrolled in this study. The chief complaint was abdominal pain in two patients,vomiting in one patient,and jaundice in the last patient. Imaging examination showed intraductal neoplasm with diagnosis as intraductal papillary mucinous neoplasm (IPMN) in case 1; space-occupying lesions were found in the head of pancreas in the other three cases with pancreatic ductal ectasia and distal pancreatic atrophy. Grossly the masses were located in pancreatic main duct and invaded into surrounding pancreatic parachyma. Microscopically the tumors arranged with solid pattern,with some trabecular structures in the last two cases. Small duct and ductules were seen in intraductal PanNETs. The immunohistochemical expression showed that SYN and CgA were positive in neoplastic cells and negative in small duct and ductules.Conclusions Intraductal PanNETs are rare conditions. The clinical symptoms and imaging findings are similar to IPMN or pancreatic carcinoma. The tumors are located within pancreatic duct partly and can invade the pancreatic parenchyma. Microscopically the neuroendocrine tumors mix with small duct and forms ductulo-insular structure,which should be differentiated with mixed ductal endocrine carcinoma. The grade and prognosis are similar to those of classical neuroendocrine tumors.

Genomic alterations in neuroendocrine cancers of the ovary.

PubMed

Yaghmour, George; Prouet, Philippe; Wiedower, Eric; Jamy, Omer Hassan; Feldman, Rebecca; Chandler, Jason C; Pandey, Manjari; Martin, Mike G

2016-08-26

As we have previously reported, small cell carcinoma of the ovary (SCCO) is a rare, aggressive form of ovarian cancer associated with poor outcomes. In an effort to identify new treatment options, we utilized comprehensive genomic profiling to assess the potential for novel therapies in SCCO. Patients with SCCO, SCCO-HT (hypercalcemic type), neuroendocrine tumors of the ovary (NET-O), and small cell carcinoma of the lung (SCLC) profiled by Caris Life Sciences between 2007-2015 were identified. Tumors were assessed with up to 21 IHC stains, in situ hybridization of cMET, EGFR, HER2 and PIK3CA, and next-generation sequencing (NGS) as well as Sanger sequencing of selected genes. Forty-six patients with SCCO (10 SCCO, 18 SCCO-HT, 18 NET-O) were identified as well as 58 patients with SCLC for comparison. Patients with SCCO and SCCO-HT were younger (median 42 years [range 12-75] and 26 years [range 8-40], respectively) than patients with NET-O 62 [range 13-76] or SCLC 66 [range 36-86]. SCCO patients were more likely to be metastatic (70 %) than SCCO-HT (50 %) or NET-O (33 %) patients, but at a similar rate to SCLC patients (65 %). PD1 expression varied across tumor type with SCCO (100 %), SCCO-HT (60 %), NET-O (33 %) vs SCLC (42 %). PDL1 expression also varied with SCCO (50 %), SCCO-HT (20 %), NET-O (33 %) and SCLC (0 %). No amplifications were identified in cMET, EGFR, or HER2 and only 1 was found in PIK3CA (NET-O). Actionable mutations were rare with 1 patient with SCCO having a BRCA2 mutation and 1 patient with NET-O having a PIK3CA mutation. No other actionable mutations were identified. No recurrent actionable mutations or rearrangements were identified using this platform in SCCO. IHC patterns may help guide the use of chemotherapy in these rare tumors.

Technology transfer in software engineering

NASA Technical Reports Server (NTRS)

Bishop, Peter C.

1989-01-01

The University of Houston-Clear Lake is the prime contractor for the AdaNET Research Project under the direction of NASA Johnson Space Center. AdaNET was established to promote the principles of software engineering to the software development industry. AdaNET will contain not only environments and tools, but also concepts, principles, models, standards, guidelines and practices. Initially, AdaNET will serve clients from the U.S. government and private industry who are working in software development. It will seek new clients from those who have not yet adopted the principles and practices of software engineering. Some of the goals of AdaNET are to become known as an objective, authoritative source of new software engineering information and parts, to provide easy access to information and parts, and to keep abreast of innovations in the field.

Reconciling catch differences from multiple fishery independent gill net surveys

USGS Publications Warehouse

Kraus, Richard T.; Vandergoot, Christopher; Kocovsky, Patrick M.; Rogers, Mark W.; Cook, H. Andrew; Brenden, Travis O.

2017-01-01

Fishery independent gill net surveys provide valuable demographic information for population assessment and resource management, but relative to net construction, the effects of ancillary species, and environmental variables on focal species catch rates are poorly understood. In response, we conducted comparative deployments with three unique, inter-agency, survey gill nets used to assess walleye Sander vitreus in Lake Erie. We used an information-theoretic approach with Akaike’s second-order information criterion (AICc) to evaluate linear mixed models of walleye catch as a function of net type (multifilament and two types of monofilament netting), mesh size (categorical), Secchi depth, temperature, water depth, catch of ancillary species, and interactions among selected variables. The model with the greatest weight of evidence showed that walleye catches were positively associated with potential prey and intra-guild predators and negatively associated with water depth and temperature. In addition, the multifilament net had higher average walleye catches than either of the two monofilament nets. Results from this study both help inform decisions about proposed gear changes to stock assessment surveys in Lake Erie, and advance our understanding of how multispecies associations explain variation in gill net catches. Of broader interest to fishery-independent gill net studies, effects of abiotic variables and ancillary species on focal specie’s catch rates were small in comparison with net characteristics of mesh size or twine type.

On the potential of Cherenkov Telescope Arrays and KM3 Neutrino Telescopes for the detection of extended sources

NASA Astrophysics Data System (ADS)

Ambrogi, L.; Celli, S.; Aharonian, F.

2018-07-01

We discuss the discovery potential of extended Very-High-Energy (VHE) neutrino sources by the future KM3 Neutrino Telescope (KM3NeT) in the context of the constraining power of the Cherenkov Telescope Array (CTA), designed for deep surveys of the sky in VHE gamma rays. The study is based on a comparative analysis of sensitivities of KM3NeT and CTA. We show that a minimum gamma-ray energy flux of E2ϕγ(10TeV) > 1 ×10-12 TeV cm-2 s-1 is required to identify a possible neutrino counterpart with a 3σ significance and 10 years of KM3NeT observations with upgoing muons, if the source has an angular size of Rsrc = 0 .1∘ and emits gamma rays with an E-2 energy spectrum through a full hadronic mechanism. This minimum gamma-ray flux is increased to the level of E2ϕγ(10TeV) > 2 ×10-11 TeV cm-2 s-1 in case of sources with radial extension of Rsrc = 2 .0∘ . The analysis methods are applied to the supernova remnant RX J1713.7-3946 and the Galactic Center Ridge, as well as to the recent HAWC catalog of multi-TeV gamma-ray sources.

Patterns of social association in the franciscana, Pontoporia blainvillei

USGS Publications Warehouse

Wells, Randall S.; Bordino, Pablo; Douglas, David C.

2013-01-01

Little is known from living animals about the social patterns of the franciscana, Pontoporia blainvillei, a small dolphin inhabiting a narrow strip of coastal waters off Argentina, Uruguay, and Brazil. These dolphins tend to be found in small groups, typically composed of two or three individuals (Bordino et al. 1999). Throughout much of the species' range, franciscanas encounter artisanal gill nets (Praderi 1989, Corcuera et al. 1994, Bertozzi and Zerbini 2002, Bordino et al. 2002, Secchi et al. 2003). Entanglement in these nets results in the deaths of thousands of individuals each year, at levels that are likely unsustainable (Bordino and Albareda 2004, Cappozzo et al. 2007).

Optimal management of on-farm resources in small-scale dairy systems of Central Mexico: model development and evaluation.

PubMed

Castelán-Ortega, Octavio Alonso; Martínez-García, Carlos Galdino; Mould, Fergus L; Dorward, Peter; Rehman, Tahir; Rayas-Amor, Adolfo Armando

2016-06-01

This study evaluates the available on-farm resources of five case studies typified as small-scale dairy systems in central Mexico. A comprehensive mixed-integer linear programming model was developed and applied to two case studies. The optimal plan suggested the following: (1) instruction and utilization of maize silage, (2) alfalfa hay making that added US$140/ha/cut to the total net income, (3) allocation of land to cultivated pastures in a ratio of 27:41(cultivated pastures/maize crop) rather than at the current 14:69, and dairy cattle should graze 12 h/day, (4) to avoid grazing of communal pastures because this activity represented an opportunity cost of family labor that reduced the farm net income, and (5) that the highest farm net income was obtained when liquid milk and yogurt sales were included in the optimal plan. In the context of small-scale dairy systems of central Mexico, the optimal plan would need to be implemented gradually to enable farmers to develop required skills and to change management strategies from reliance on forage and purchased concentrate to pasture-based and conserved forage systems.

Proof-of-Concept of a Millimeter-Wave Integrated Heterogeneous Network for 5G Cellular

PubMed Central

Okasaka, Shozo; Weiler, Richard J.; Keusgen, Wilhelm; Pudeyev, Andrey; Maltsev, Alexander; Karls, Ingolf; Sakaguchi, Kei

2016-01-01

The fifth-generation mobile networks (5G) will not only enhance mobile broadband services, but also enable connectivity for a massive number of Internet-of-Things devices, such as wireless sensors, meters or actuators. Thus, 5G is expected to achieve a 1000-fold or more increase in capacity over 4G. The use of the millimeter-wave (mmWave) spectrum is a key enabler to allowing 5G to achieve such enhancement in capacity. To fully utilize the mmWave spectrum, 5G is expected to adopt a heterogeneous network (HetNet) architecture, wherein mmWave small cells are overlaid onto a conventional macro-cellular network. In the mmWave-integrated HetNet, splitting of the control plane (CP) and user plane (UP) will allow continuous connectivity and increase the capacity of the mmWave small cells. mmWave communication can be used not only for access linking, but also for wireless backhaul linking, which will facilitate the installation of mmWave small cells. In this study, a proof-of-concept (PoC) was conducted to demonstrate the practicality of a prototype mmWave-integrated HetNet, using mmWave technologies for both backhaul and access. PMID:27571074

Proof-of-Concept of a Millimeter-Wave Integrated Heterogeneous Network for 5G Cellular.

PubMed

Okasaka, Shozo; Weiler, Richard J; Keusgen, Wilhelm; Pudeyev, Andrey; Maltsev, Alexander; Karls, Ingolf; Sakaguchi, Kei

2016-08-25

The fifth-generation mobile networks (5G) will not only enhance mobile broadband services, but also enable connectivity for a massive number of Internet-of-Things devices, such as wireless sensors, meters or actuators. Thus, 5G is expected to achieve a 1000-fold or more increase in capacity over 4G. The use of the millimeter-wave (mmWave) spectrum is a key enabler to allowing 5G to achieve such enhancement in capacity. To fully utilize the mmWave spectrum, 5G is expected to adopt a heterogeneous network (HetNet) architecture, wherein mmWave small cells are overlaid onto a conventional macro-cellular network. In the mmWave-integrated HetNet, splitting of the control plane (CP) and user plane (UP) will allow continuous connectivity and increase the capacity of the mmWave small cells. mmWave communication can be used not only for access linking, but also for wireless backhaul linking, which will facilitate the installation of mmWave small cells. In this study, a proof-of-concept (PoC) was conducted to demonstrate the practicality of a prototype mmWave-integrated HetNet, using mmWave technologies for both backhaul and access.

49 CFR 173.171 - Smokeless powder for small arms.

Code of Federal Regulations, 2013 CFR

2013-10-01

... any one box (one package) must not exceed 7.3 kg (16 pounds). [Amdt. 173-224, 55 FR 52643, Dec. 21...) net mass in: (1) One rail car, motor vehicle, or cargo-only aircraft; or (2) One freight container on... inner packagings not exceeding 3.6 kg (8 pounds) net mass and outer packaging of UN 4G fiberboard boxes...

49 CFR 173.170 - Black powder for small arms.

Code of Federal Regulations, 2014 CFR

2014-10-01

....58; (b) The total quantity of black powder in one motor vehicle, rail car, or freight container may not exceed 45.4 kg (100 pounds) net mass, and no more than four freight containers may be on board one... receptacles not over 454 g (16 ounces) net capacity each, with no more than 25 cans in one outer UN 4G...

Urban-Small Building Complex Environment: W07US Stability Analysis and Inter-Study Comparison, Volume AS-2

DTIC Science & Technology

2008-05-01

pyranometer (Kipp/Zonen-CM3). A Campbell CR23X micro-logger recorded the standard meteorological parameters in 1-min averages. 3 Figure 2... Pyranometer Kipp/Zonen CM3 Watts/meter2 Net solar radiation Net radiometer Kipp/Zonen NR-LITE Watts/meter2 Table 4. W07US tower configuration. Tower Number

Net energy output from harvesting small-diameter trees using a mechanized system

Treesearch

Fei Pan; Han-Sup Han; Leonard R. Johnson; William J. Elliot

2008-01-01

What amount of extra energy can be generated after subtracting the total energy consumed to produce the biomass energy? Knowing the ratio between energy output and input is a valid question when highly mechanized systems that consume fossil fuels are used to harvest and transport forest biomass for energy. We estimated the net energy generated from mechanical fuel...

Effectiveness of fishing gears to assess fish assemblage size structure in small lake ecosystems

Treesearch

T. A. Clement; K. Pangle; D. G. Uzarski; B. A. Murry

2014-01-01

Measurement of fish body-size distributions is increasingly used as a management tool to assess fishery status. However, the effects of gear selection on observed fish size structure has not received sufficient attention. Four different gear types (experimental gill nets, fine mesh bag seine, and two different sized mesh trap nets), which are commonly employed in the...

Development of a super-pressure balloon with a diamond-shaped net

NASA Astrophysics Data System (ADS)

Saito, Y.; Iijima, I.; Matsuzaka, Y.; Matsushima, K.; Tanaka, S.; Kajiwara, K.; Shimadu, S.

2014-10-01

The essential reason of the lobed-pumpkin shaped super-pressure balloon to withstand against the high pressure is that the local curvature of the balloon film is kept small. Recently, it has been found that the small local curvature can also be obtained if the balloon is covered by a diamond-shaped net with a vertically elongated shape. The development of the super-pressure balloon using this method was started from a 3-m balloon with a polyethylene film covered by a net using Kevlar ropes. The ground inflation test showed the expected high burst pressure. Then, a 6-m and a 12-m balloon using a polyethylene film and a net using the Vectran were developed and stable deployment was checked through the ground inflation tests. The flight test of a 3000 m3 balloon was performed in 2013 and shown to resist a pressure of at least 400 Pa. In the future, after testing a new design to relax a possible stress concentration around the polar area, test flights of scaled balloons will be performed gradually enlarging their size. The goal is to launch a 300,000 m3 super-pressure balloon.

Global Patterns in Human Consumption of Net Primary Production

NASA Technical Reports Server (NTRS)

Imhoff, Marc L.; Bounoua, Lahouari; Ricketts, Taylor; Loucks, Colby; Harriss, Robert; Lawrence William T.

2004-01-01

The human population and its consumption profoundly affect the Earth's ecosystems. A particularly compelling measure of humanity's cumulative impact is the fraction of the planet's net primary production that we appropriate for our Net primary production-the net amount of solar energy converted to plant organic matter through photosynthesis-can be measured in units of elemental carbon and represents the primary food energy source for the world's ecosystems. Human appropriation of net primary production, apart from leaving less for other species to use, alters the composition of the atmosphere, levels of biodiversity, flows within food webs and the provision of important primary production required by humans and compare it to the total amount generated on the landscape. We then derive a spatial ba!mce sheet of net primary production supply and demand for the world. We show that human appropriation of net primary production varies spatially from almost zero to many times the local primary production. These analyses reveal the uneven footprint of human consumption and related environmental impacts, indicate the degree to which human populations depend on net primary production "imports" and suggest policy options for slowing future growth of human appropriation of net primary production.

Source limitation of carbon gas emissions in high-elevation mountain streams and lakes

USGS Publications Warehouse

Crawford, John T.; Dornblaser, Mark M.; Stanley, Emily H.; Clow, David W.; Striegl, Robert G.

2015-01-01

Inland waters are an important component of the global carbon cycle through transport, storage, and direct emissions of CO2 and CH4 to the atmosphere. Despite predictions of high physical gas exchange rates due to turbulent flows and ubiquitous supersaturation of CO2—and perhaps also CH4—patterns of gas emissions are essentially undocumented for high mountain ecosystems. Much like other headwater networks around the globe, we found that high-elevation streams in Rocky Mountain National Park, USA, were supersaturated with CO2 during the growing season and were net sources to the atmosphere. CO2concentrations in lakes, on the other hand, tended to be less than atmospheric equilibrium during the open water season. CO2 and CH4 emissions from the aquatic conduit were relatively small compared to many parts of the globe. Irrespective of the physical template for high gas exchange (high k), we found evidence of CO2 source limitation to mountain streams during the growing season, which limits overall CO2emissions. Our results suggest a reduced importance of aquatic ecosystems for carbon cycling in high-elevation landscapes having limited soil development and high CO2 consumption via mineral weathering.

Microsoft C#.NET program and electromagnetic depth sounding for large loop source

NASA Astrophysics Data System (ADS)

Prabhakar Rao, K.; Ashok Babu, G.

2009-07-01

A program, in the C# (C Sharp) language with Microsoft.NET Framework, is developed to compute the normalized vertical magnetic field of a horizontal rectangular loop source placed on the surface of an n-layered earth. The field can be calculated either inside or outside the loop. Five C# classes with member functions in each class are, designed to compute the kernel, Hankel transform integral, coefficients for cubic spline interpolation between computed values and the normalized vertical magnetic field. The program computes the vertical magnetic field in the frequency domain using the integral expressions evaluated by a combination of straightforward numerical integration and the digital filter technique. The code utilizes different object-oriented programming (OOP) features. It finally computes the amplitude and phase of the normalized vertical magnetic field. The computed results are presented for geometric and parametric soundings. The code is developed in Microsoft.NET visual studio 2003 and uses various system class libraries.

Sedimentation and occurrence and trends of selected chemical constituents in bottom sediment of 10 small reservoirs, Eastern Kansas

USGS Publications Warehouse

Juracek, Kyle E.

2004-01-01

Many municipalities in Kansas rely on small reservoirs as a source of drinking water and for recreational activities. Because of their significance to the community, management of the reservoirs and the associated basins is important to protect the reservoirs from degradation. Effective reservoir management requires information about water quality, sedimentation, and sediment quality. A combination of bathymetric surveying and bottom-sediment coring during 2002 and 2003 was used to investigate sediment deposition and the occurrence of selected nutrients (total nitrogen and total phosphorus), organic and total carbon, 26 trace elements, 15 organochlorine compounds, and 1 radionuclide in the bottom sediment of 10 small reservoirs in eastern Kansas. Original reservoir water-storage capacities ranged from 23 to 5,845 acre-feet. The mostly agricultural reservoir basins range in area from 0.6 to 14 square miles. The mean annual net volume of deposited sediment, estimated separately for several of the reservoirs, ranged from about 43,600 to about 531,000 cubic feet. The estimated mean annual net mass of deposited sediment ranged from about 1,360,000 to about 23,300,000 pounds. The estimated mean annual net sediment yields from the reservoir basins ranged from about 964,000 to about 2,710,000 pounds per square mile. Compared to sediment yield estimates provided by a statewide study published in 1965, the estimates determined in this study differed substantially and were typically smaller. A statistically significant positive correlation was determined for the relation between sediment yield and mean annual precipitation. Nutrient concentrations in the bottom sediment varied substantially among the 10 reservoirs. Median total nitrogen concentrations ranged from 1,400 to 3,700 milligrams per kilogram. Median total phosphorus concentrations ranged from 550 to 1,300 milligrams per kilogram. A statistically significant positive trend (that is, nutrient concentration increased toward the top of the sediment core) was indicated in one reservoir for total nitrogen and in two reservoirs for total phosphorus. Also, a possible positive trend for total nitrogen was indicated in two other reservoirs. These trends in nutrient concentrations may be related to a statewide increase in fertilizer use. Alternatively, the trends may be indicative of diagenesis (that is, postdepositional changes in the sediment caused by various processes including decomposition). Nutrient loads and yields also varied substantially among the five reservoirs for which loads and yields were estimated. Estimated mean annual net loads of total nitrogen deposited in the bottom sediment ranged from 4,080 to 49,100 pounds. Estimated mean annual net loads of total phosphorus deposited in the bottom sediment ranged from 1,120 to 20,800 pounds. Estimated mean annual net yields of total nitrogen from the basins ranged from 2,210 to 6,800 pounds per square mile. Estimated mean annual net yields of total phosphorus from the basins ranged from 598 to 2,420 pounds per square mile. Compared to nonenforceable sediment-quality guidelines adopted by the U.S. Environmental Protection Agency, bottom-sediment concentrations of arsenic, chromium, copper, and nickel in samples from all 10 reservoirs typically exceeded the threshold-effects levels (TELs) but were less than the probable-effects levels (PELs). TELs represent the concentrations above which toxic biological effects occasionally occur in aquatic organisms, whereas PELs represent the concentrations above which toxic biological effects usually or frequently occur. Concentrations of cadmium, lead, and zinc exceeded the TELs but were less than the PELs in sediment samples from about one-half of the reservoirs and were less than the TELs in samples from the remaining reservoirs. Mercury concentrations were less than the TEL (information only available for four reservoirs). Silver was not detected in the bottom sediment fro

NASA Net Zero Energy Buildings Roadmap

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pless, S.; Scheib, J.; Torcellini, P.

In preparation for the time-phased net zero energy requirement for new federal buildings starting in 2020, set forth in Executive Order 13514, NASA requested that the National Renewable Energy Laboratory (NREL) to develop a roadmap for NASA's compliance. NASA detailed a Statement of Work that requested information on strategic, organizational, and tactical aspects of net zero energy buildings. In response, this document presents a high-level approach to net zero energy planning, design, construction, and operations, based on NREL's first-hand experience procuring net zero energy construction, and based on NREL and other industry research on net zero energy feasibility. The strategicmore » approach to net zero energy starts with an interpretation of the executive order language relating to net zero energy. Specifically, this roadmap defines a net zero energy acquisition process as one that sets an aggressive energy use intensity goal for the building in project planning, meets the reduced demand goal through energy efficiency strategies and technologies, then adds renewable energy in a prioritized manner, using building-associated, emission- free sources first, to offset the annual energy use required at the building; the net zero energy process extends through the life of the building, requiring a balance of energy use and production in each calendar year.« less

GHG emissions from corn-soybean rotations and perennial grasses on a Mollisol

USDA-ARS?s Scientific Manuscript database

Changes in management can convert agriculture from a net source to a net sink of greenhouse gases. A field study was established in 2003 in Indiana on a Typic Haplaquoll to determine the impact of nitrogen management on trace gas emissions. In the second phase of the experiment (2008-11), there were...

Infantry Communication Data

DTIC Science & Technology

1968-01-01

which forms a conducting medium between the electrodes of a dry cell , storage cell , or electrolytic capacitor. ELECTROMAGNETIC FIELD - A mlagnetic...Dry cel batteries. (2) Vehicular batteries. (3) Hand generators. (4) Gas engine generators. (5) Wet cell batteries. 2-5. NETTING TWO RADIO SETS: To net...1600 meters Power output .. .. .. ..... ..... ..... 5watt Power source. .. .. .. ..... ...... ... dry cell battery flA-270/U Battery lift

MASTER Net: OT in M31 direction and new CV

NASA Astrophysics Data System (ADS)

Shumkov, V.; Pogrosheva, T.; Lipunov, V.; Lopez, R. Rebolo; Serra-Ricart, M.; Buckley, D.; Gorbovskoy, E.; Tiurina, N.; Balanutsa, P.; Kuznetsov, A.; Kornilov, V.; Gress, O.; Zimnukhov, D.; Vladimirov, V.; Vlasenko, D.; Kuvshinov, D.

2018-01-01

MASTER-SAAO auto-detection system ( Lipunov et al., "MASTER Global Robotic Net", Advances in Astronomy, 2010, 30L ) discovered OT source at (RA, Dec) = 03h 00m 57.16s -66d 25m 23.1s on 2018-01-11.89176 UT. The OT unfiltered magnitude is 19.2m (mlim=20.1).

Project Scheduling Tool for Maintaining Capability Interdependencies and Defence Program Investment: A User’s Guide

DTIC Science & Technology

2014-09-01

The free, open-source Integrated Development Environment (IDE) NetBeans [11] was used in the creation of the Graphical User Interface (GUI) for the tool...Oracle Corporation (2013) NetBeans IDE 7.4, http://www.netbeans.org. 12. O’Shea, K., Pong, P. & Bulluss, G. (2012) Fit-for-Purpose Visualisation of

Baseline and Projected Future Carbon Stocks and Fluxes in the Hawaiian Islands

NASA Astrophysics Data System (ADS)

Selmants, P. C.; Sleeter, B. M.; Giardina, C. P.; Zhu, Z.; Asner, G. P.

2016-12-01

Hawaii is characterized by steep climatic gradients and heterogeneous land cover within a small geographic area, presenting a model tropical system to capture ecosystem carbon dynamics across a wide range of climate, soil, and land use conditions. However, ecosystem carbon balance is poorly understood on a statewide level, and the potential for climate and land use change to affect carbon dynamics in Hawaii has not been formally assessed. We estimated current baseline and projected future ecosystem carbon stocks and fluxes on the seven main Hawaiian Islands using a combination of remote sensing, published plot-level data, and simulation modeling. Total ecosystem carbon storage during the baseline period was estimated at 258 TgC, with 70% stored as soil organic carbon, 25% as live biomass and 5% as surface detritus, and gross primary production was estimated at 20 TgC y-1. Net ecosystem carbon balance, which incorporated carbon losses from freshwater aquatic fluxes to nearshore waters and wildland fire emissions, was estimated as 0.34 TgC y-1 during the baseline period, offsetting 7% of anthropogenic emissions. We used a state and transition simulation model to estimate the response of ecosystem carbon stocks and fluxes to potential changes in climate, land use, and wildfire over a 50-year projection period (2012-2061). Total ecosystem carbon storage was projected to increase by 5% by the year 2061, but net ecosystem carbon balance was projected to decline by 35% due to climate change induced reductions in statewide net primary production and increased carbon losses from land use and land cover change. Our analysis indicates that the State of Hawaii would remain a net carbon sink overall, primarily because of ecosystem carbon sequestration on Hawaii Island, but predicted changes in climate and land use on Kauai and Oahu would convert these islands to net carbon sources. The Hawaii carbon assessment is part of a larger effort by the U.S. Geological Survey to assess the carbon sequestration potential of ecosystems across the United States and should provide valuable information for setting research and policy priorities for sustainable carbon management strategies aimed at offsetting anthropogenic carbon emissions.

Effects of experimental water table and temperature manipulations on ecosystem CO2 fluxes in an Alaskan rich fen

USGS Publications Warehouse

Chivers, M.R.; Turetsky, M.R.; Waddington, J.M.; Harden, J.W.; McGuire, A.D.

2009-01-01

Peatlands store 30% of the world's terrestrial soil carbon (C) and those located at northern latitudes are expected to experience rapid climate warming. We monitored growing season carbon dioxide (CO2) fluxes across a factorial design of in situ water table (control, drought, and flooded plots) and soil warming (control vs. warming via open top chambers) treatments for 2 years in a rich fen located just outside the Bonanza Creek Experimental Forest in interior Alaska. The drought (lowered water table position) treatment was a weak sink or small source of atmospheric CO2 compared to the moderate atmospheric CO2 sink at our control. This change in net ecosystem exchange was due to lower gross primary production and light-saturated photosynthesis rather than increased ecosystem respiration. The flooded (raised water table position) treatment was a greater CO2 sink in 2006 due largely to increased early season gross primary production and higher light-saturated photosynthesis. Although flooding did not have substantial effects on rates of ecosystem respiration, this water table treatment had lower maximum respiration rates and a higher temperature sensitivity of ecosystem respiration than the control plot. Surface soil warming increased both ecosystem respiration and gross primary production by approximately 16% compared to control (ambient temperature) plots, with no net effect on net ecosystem exchange. Results from this rich fen manipulation suggest that fast responses to drought will include reduced ecosystem C storage driven by plant stress, whereas inundation will increase ecosystem C storage by stimulating plant growth. ?? 2009 Springer Science+Business Media, LLC.

Amplification of seismic waves beneath active volcanoes

NASA Astrophysics Data System (ADS)

Navon, O.; Lensky, N. G.; Collier, L.; Neuberg, J.; Lyakhovsky, V.

2003-04-01

Long-period (LP) seismic events are typical for many volcanoes and are attributed to energy leaking from waves traveling along the conduit - country-rock interface. While the wave propagation is well understood, their actual trigger mechanism and their energy source are not. Here we test the hypothesis that energy may be supplied by volatile-release from a supersaturated melt. If bubbles are initially in equilibrium with the melt in the conduit, and the melt is suddenly decompressed, the transfer of volatiles from the supersaturated melt into the bubbles transforms stored potential energy into expansion work. For example, small dome collapse, opening of a crack or a displacement along the brittle part of the conduit may decompress the magma by a few bars and create the needed supersaturation. This energy is released over the timescale of accelerated expansion, which is longer than a typical LP event. Following decompression, when the transfer of volatiles into bubbles is fast enough, expansion accelerates and the bulk viscosity of the bubbly magma is negative (Lensky et al., 2002). New calculations show that under such conditions a sinusoidal P-wave is amplified. We note that seismic waves created by tectonic earthquakes that are not associated with net decompression, do not lead to net release of volatiles or to net expansion. In this case, the bulk viscosity is positive and waves traveling through the magma should attenuate. The proposed model explains how weak seismic signals may be amplified as they travel through a conduit that contains supersaturated bubbly magma. It provides the general framework for amplifying volcanic seismicity such as long-period events.

The importance of the diurnal and annual cycle of air traffic for contrail radiative forcing.

PubMed

Stuber, Nicola; Forster, Piers; Rädel, Gaby; Shine, Keith

2006-06-15

Air traffic condensation trails, or contrails, are believed to have a net atmospheric warming effect, although one that is currently small compared to that induced by other sources of human emissions. However, the comparably large growth rate of air traffic requires an improved understanding of the resulting impact of aircraft radiative forcing on climate. Contrails have an effect on the Earth's energy balance similar to that of high thin ice clouds. Their trapping of outgoing longwave radiation emitted by the Earth and atmosphere (positive radiative forcing) is partly compensated by their reflection of incoming solar radiation (negative radiative forcing). On average, the longwave effect dominates and the net contrail radiative forcing is believed to be positive. Over daily and annual timescales, varying levels of air traffic, meteorological conditions, and solar insolation influence the net forcing effect of contrails. Here we determine the factors most important for contrail climate forcing using a sophisticated radiative transfer model for a site in southeast England, located in the entrance to the North Atlantic flight corridor. We find that night-time flights during winter (December to February) are responsible for most of the contrail radiative forcing. Night flights account for only 25 per cent of daily air traffic, but contribute 60 to 80 per cent of the contrail forcing. Further, winter flights account for only 22 per cent of annual air traffic, but contribute half of the annual mean forcing. These results suggest that flight rescheduling could help to minimize the climate impact of aviation.

Spectrum of Gastroenteropancreatic NENs in Routine Histological Examinations of Bioptic and Surgical Specimen: A Study of 161 Cases Collected from 17 Departments of Pathology in the Czech Republic

PubMed Central

Mandys, Václav

2014-01-01

Objective. To characterize GEP-NENs in routine biopsies and surgical specimen in the Czech Republic and to evaluate how WHO Classification (2010) is acceptable in diagnostic practice. Methods. Paraffin-embedded blocks and bioptic reports were collected from 17 departments of pathology. Histologic slides were stained with H&E and immunohistologically for CgA, synaptophysin, and Ki-67. Results. Out of 28 gastric NENs, there were 22 NETs, G1, 5 NETs, G2, and 1 NEC. Ten duodenal NENs were NETs, G1. Among 27 NENs of jejunum and ileum, 23 were NETs, G1, 2 NETs, G2, and 1 NEC and 1 mixed adenoneuroendocrine carcinoma (MANEC). Among 42 appendiceal “incidentalomas”, 39 were NETs G1, 2 goblet cell carcinoids, and 1 MANEC. Out of 34 large intestinal NENs, 30 were NETs, G1, 3 NETs, G2, and 1 NEC. One small intestinal and 6 large bowel neoplasms were reclassified as poorly differentiated adenocarcinomas. In 12 pancreatic NENs, there were 7 NETs, G1, 3 NETs, G2, and 2 NECs. Conclusions. Our study demonstrates differences in GEP-NENs frequency in sites of origin in our region, comparing to other countries. Regarding routine bioptic diagnostics, we gave evidence that the WHO 2010 classification of NENs is fully acceptable for exact categorisation of tumours. PMID:24695372

The Design of NetSecLab: A Small Competition-Based Network Security Lab

ERIC Educational Resources Information Center

Lee, C. P.; Uluagac, A. S.; Fairbanks, K. D.; Copeland, J. A.

2011-01-01

This paper describes a competition-style of exercise to teach system and network security and to reinforce themes taught in class. The exercise, called NetSecLab, is conducted on a closed network with student-formed teams, each with their own Linux system to defend and from which to launch attacks. Students are expected to learn how to: 1) install…

Pressure, O2, and CO2, in aquatic Closed Ecological Systems

NASA Astrophysics Data System (ADS)

Taub, Frieda B.; McLaskey, Anna K.

2013-03-01

Pressure increased during net photosynthetic O2 production in the light and decreased during respiratory O2 uptake during the dark in aquatic Closed Ecological Systems (CESs) with small head gas volumes. Because most CO2 will be in the liquid phase as bicarbonate and carbonate anions, and CO2 is more soluble than O2, volumes of gaseous CO2 and gaseous O2 will not change in a compensatory manner, leading to the development of pressure. Pressure increases were greatest with nutrient rich medium with NaHCO3 as the carbon source. With more dilute media, pressure was greatest with NaHCO3, and less with cellulose or no-added carbon. Without adequate turbulence, pressure measurements lagged dissolved O2 concentrations by several hours and dark respiration would have been especially underestimated in our systems (250-1000 ml). With adequate turbulence (rotary shaker), pressure measurements and dissolved O2 concentrations generally agreed during lights on/off cycles, but O2 measurements provided more detail. At 20 °C, 29.9 times as much O2 will distribute into the gas phase as in the liquid, per unit volume, as a result of the limited solubility of O2 in water and according to Henry's Law. Thus even a small head gas volume can contain more O2 than a larger volume of water. When both dissolved and gaseous O2 and CO2 are summed, the changes in Total O2 and CO2 are in relatively close agreement when NaHCO3 is the carbon source. These findings disprove an assumption made in some of Taub's earlier research that aquatic CESs would remain at approximately atmospheric pressure because approximately equal molar quantities of O2 and CO2 would exchange during photosynthesis and respiration; this assumption neglected the distribution of O2 between water and gas phases. High pressures can occur when NaHCO3 is the carbon source in nutrient rich media and if head-gas volumes are small relative to the liquid volume; e.g., one "worse case" condition developed 800 mm Hg above atmospheric pressure and broke the glass container. Plastic screw cap closures are likely to leak at high pressures and should not be assumed to seal unless tested at appropriate pressures. Pressure can be reduced by having larger head-gas volumes and using less concentrated nutrient solutions. It is important that pressure changes be considered for both safety and closure, and if total O2 is used as the measure of net photosynthesis and respiration, the O2 in the gas phase must be added to the dissolved O2.

Facing the Recession: How Did Safety-Net Hospitals Fare Financially Compared with Their Peers?

PubMed Central

Reiter, Kristin L; Jiang, H Joanna; Wang, Jia

2014-01-01

Objective To examine the effect of the recession on the financial performance of safety-net versus non-safety-net hospitals. Data Sources/Study Setting Agency for Healthcare Research and Quality Hospital Cost and Utilization Project State Inpatient Databases, Medicare Cost Reports, American Hospital Association Annual Survey, InterStudy, and Area Health Resource File. Study Design Retrospective, longitudinal panel of hospitals, 2007–2011. Safety-net hospitals were identified using percentage of patients who were Medicaid or uninsured. Generalized estimating equations were used to estimate average effects of the recession on hospital operating and total margins, revenues and expenses in each year, 2008–2011, comparing safety-net with non-safety-net hospitals. Data Collection/Extraction Methods 1,453 urban, nonfederal, general acute hospitals in 32 states with complete data. Principal Findings Safety-net hospitals, as identified in 2007, had lower operating and total margins. The gap in operating margin between safety-net and non-safety-net hospitals was sustained throughout the recession; however, total margin was more negatively affected for non-safety-net hospitals in 2008. Higher percentages of Medicaid and uninsured patients were associated with lower revenue in private hospitals in all years, and lower revenue and expenses in public hospitals in 2011. Conclusions Safety-net hospitals may not be disproportionately vulnerable to macro-economic fluctuations, but their significantly lower margins leave less financial cushion to weather sustained financial pressure. PMID:25220012

An analysis of current source density profiles activated by local stimulation in the mouse auditory cortex in vitro.

PubMed

Yamamura, Daiki; Sano, Ayaka; Tateno, Takashi

2017-03-15

To examine local network properties of the mouse auditory cortex in vitro, we recorded extracellular spatiotemporal laminar profiles driven by short electric local stimulation on a planar multielectrode array substrate. The recorded local field potentials were subsequently evaluated using current source density (CSD) analysis to identify sources and sinks. Current sinks are thought to be an indicator of net synaptic current in the small volume of cortex surrounding the recording site. Thus, CSD analysis combined with multielectrode arrays enabled us to compare mean synaptic activity in response to small current stimuli on a layer-by-layer basis. We also used senescence-accelerated mice (SAM), some strains of which show earlier onset of age-related hearing loss, to examine the characteristic spatiotemporal CSD profiles stimulated by electrodes in specific cortical layers. Thus, the CSD patterns were classified into several clusters based on stimulation sites in the cortical layers. We also found some differences in CSD patterns between the two SAM strains in terms of aging according to principle component analysis with dimension reduction. For simultaneous two-site stimulation, we modeled the obtained CSD profiles as a linear superposition of the CSD profiles to individual single-site stimulation. The model analysis indicated the nonlinearity of spatiotemporal integration over stimulus-driven activity in a layer-specific manner. Finally, on the basis of these results, we discuss the auditory cortex local network properties and the effects of aging on these mouse strains. Copyright © 2017 Elsevier B.V. All rights reserved.

78 FR 23810 - Privacy Act System of Records

Federal Register 2010, 2011, 2012, 2013, 2014

2013-04-22

... the protected information collected from applicants and participants in the Small Business Innovation... as a name or Social Security number. SYSTEM NAME: TechNet--SBA 38. SYSTEM LOCATION: SBA's Office of Technology, Office of Investment and Innovation, Small Business Administration, 409 Third Street SW...

Contributions of wildland fire to terrestrial ecosystem carbon dynamics in North America from 1990 to 2012

USGS Publications Warehouse

Chen, Guangsheng; Hayes, Daniel J.; McGuire, A. David

2017-01-01

Burn area and the frequency of extreme fire events have been increasing during recent decades in North America, and this trend is expected to continue over the 21st century. While many aspects of the North American carbon budget have been intensively studied, the net contribution of fire disturbance to the overall net carbon flux at the continental scale remains uncertain. Based on national scale, spatially explicit and long-term fire data, along with the improved model parameterization in a process-based ecosystem model, we simulated the impact of fire disturbance on both direct carbon emissions and net terrestrial ecosystem carbon balance in North America. Fire-caused direct carbon emissions were 106.55 ± 15.98 Tg C/yr during 1990–2012; however, the net ecosystem carbon balance associated with fire was −26.09 ± 5.22 Tg C/yr, indicating that most of the emitted carbon was resequestered by the terrestrial ecosystem. Direct carbon emissions showed an increase in Alaska and Canada during 1990–2012 as compared to prior periods due to more extreme fire events, resulting in a large carbon source from these two regions. Among biomes, the largest carbon source was found to be from the boreal forest, primarily due to large reductions in soil organic matter during, and with slower recovery after, fire events. The interactions between fire and environmental factors reduced the fire-caused ecosystem carbon source. Fire disturbance only caused a weak carbon source as compared to the best estimate terrestrial carbon sink in North America owing to the long-term legacy effects of historical burn area coupled with fast ecosystem recovery during 1990–2012.

Bauxite and alumina

USGS Publications Warehouse

Bray, E.L.

2012-01-01

The United States is import-reliant for nearly all of the bauxite that it consumes. Small amounts of bauxite and bauxitic clays are produced in Alabama, Arkansas and Georgia for nonmetallurgical uses. Metallurgical-grade bauxite (crude dry) imports in 2011 totaled 9.54 Mt (10.5 million st), 18 percent more than the quantity imported in 2010. Jamaica (54 percent). Guinea (25 percent) and Brazil (18 percent) were the leading suppliers to the United States in 2011. In 2011,117 kt (129,000 st) of refractory-grade calcined bauxite was imported, a 69-percent decrease compared with imports in 2010. This decrease was partly attributed to an increase in net imports of refractory products such as bricks and crucibles, which were 39 percent higher than in the prior year. Imports of refractory-grade calcined bauxite from Brazil declined by 99 percent and by 75 percent from Greece. Restrictions on exports of raw materials from China also might have contributed a small amount to the decrease in imports. Imports from China declined by 45 percent. Guyana (42 percent), China (35 percent) and Greece (22 percent) were the leading sources of U.S. refractory-grade calcined bauxite imports. Imports of nonrefractory-grade calcined bauxite in 2011 totaled 236 kt (260,000 st), 23 percent less than the quantity imported in 2010. Guyana (51 percent), Australia (37 percent) and China (7 percent) were the leading sources

Grazing management contributions to net global warming potential: a long-term evaluation in the Northern Great Plains.

PubMed

Liebig, M A; Gross, J R; Kronberg, S L; Phillips, R L; Hanson, J D

2010-01-01

The role of grassland ecosystems as net sinks or sources of greenhouse gases (GHGs) is limited by a paucity of information regarding management impacts on the flux of nitrous oxide (N(2)O) and methane (CH(4)). Furthermore, no long-term evaluation of net global warming potential (GWP) for grassland ecosystems in the northern Great Plains (NGP) of North America has been reported. Given this need, we sought to determine net GWP for three grazing management systems located within the NGP. Grazing management systems included two native vegetation pastures (moderately grazed pasture [MGP], heavily grazed pasture [HGP]) and a heavily grazed crested wheatgrass [Agropyron desertorum (Fisch. ex. Link) Schult.] pasture (CWP) near Mandan, ND. Factors evaluated for their contribution to GWP included (i) CO(2) emissions associated with N fertilizer production and application, (ii) literature-derived estimates of CH(4) production for enteric fermentation, (iii) change in soil organic carbon (SOC) over 44 yr using archived soil samples, and (iv) soil-atmosphere N(2)O and CH(4) fluxes over 3 yr using static chamber methodology. Analysis of SOC indicated all pastures to be significant sinks for SOC, with sequestration rates ranging from 0.39 to 0.46 Mg C ha(-1) yr(-1). All pastures were minor sinks for CH(4) (<2.0 kg CH(4)-C ha(-1) yr(-1)). Greater N inputs within CWP contributed to annual N(2)O emission nearly threefold greater than HGP and MGP. Due to differences in stocking rate, CH(4) production from enteric fermentation was nearly threefold less in MGP than CWP and HGP. When factors contributing to net GWP were summed, HGP and MGP were found to serve as net CO(2equiv.) sinks, while CWP was a net CO(2equiv.) source. Values for GWP and GHG intensity, however, indicated net reductions in GHG emissions can be most effectively achieved through moderate stocking rates on native vegetation in the NGP.

Demand and willingness-to-pay for bed nets in Tanzania: results from a choice experiment.

PubMed

Gingrich, Chris D; Ricotta, Emily; Kahwa, Amos; Kahabuka, Catherine; Koenker, Hannah

2017-07-14

Universal coverage campaigns for long-lasting insecticide-treated nets do not always reach the goal of one net for every two household members, and even when ownership of at least one net per household is high, many households may not own enough nets. The retail market provides these households options for replacing or increasing the number of nets they own with products that best fit their needs since a variety of net shapes, sizes, and colours are available. Hence, it is important to understand the factors affecting private net demand. This study explores private demand for nets in Tanzania using a discrete choice experiment. The experiment provides participants the option to buy nets with their own money, and thus should prove more accurate than a hypothetical survey of net preferences. Nearly 800 participants sampled in two regions showed an overall strong demand for nets, with 40% choosing to buy a net across all seven combinations of net prices and characteristics such as size, shape, and insecticide treatment. Only 8% of all participants chose not to buy a single net. A key factor influencing demand was whether a participant's household currently owned sufficient nets for all members, with rural participants showing lower net coverage and greater demand than urban participants. Both poor and less poor households showed strong evidence of making purchase decisions based on more than price alone. Mean willingness-to-pay values for a net started at US$1.10 and grew by US$0.50-1.40 for various attributes such as rectangular shape, large size, and insecticide treatment. The impact of price on demand was negative but small, with elasticity values between -0.25 and -0.45. The results suggest that private demand for nets in Tanzania could potentially supplement future coverage campaigns. Net manufacturers and retailers should advertise and promote consumers' preferred net attributes to improve sales and further expand net access and coverage. To overcome household liquidity concerns and best replicate the experiment results, policy makers should consider making credit available for interested buyers.

The Impact of an Authentic Science Experience on STEM Identity: A Preliminary Analysis of YouthAstroNet and MicroObservatory Telescope Network Participant Data

NASA Astrophysics Data System (ADS)

Dussault, Mary E.; Wright, Erika A.; Sadler, Philip; Sonnert, Gerhard; ITEAMS II Team

2018-01-01

Encouraging students to pursue careers in science, technology, engineering, and mathematics (STEM) is a high priority for national K-12 education improvement initiatives in the United States. Many educators have claimed that a promising strategy for nurturing early student interest in STEM is to engage them in authentic inquiry experiences. “Authentic” refers to investigations in which the questions are of genuine interest and importance to students, and the inquiry more closely resembles the way real science is done. Science education researchers and practitioners at the Harvard-Smithsonian Center for Astrophysics have put this theory into action with the development of YouthAstroNet, a nationwide online learning community of middle-school aged students, educators, and STEM professionals that features the MicroObservatory Robotic Telescope Network, professional image analysis software, and complementary curricula for use in a variety of learning settings. This preliminary study examines factors that influence YouthAstroNet participants' Science Affinity, STEM Identity, and STEM Career Interest, using the matched pre/post survey results of 261 participants as the data source. The pre/post surveys included some 40 items measuring affinity, identity, knowledge, and career interest. In addition, the post intervention instrument included a number of items in which students reported the instructional strategies they experienced as part of the program. A simple analysis of pre-post changes in affinity and interest revealed very little significant change, and for those items where a small pre-post effect was observed, the average change was most often negative. However, after accounting for students' different program treatment experiences and for their prior attitudes and interests, a predictor of significant student gains in Affinity, STEM Identity, Computer/Math Identity, and STEM Career Interest could be identified. This was the degree to which students reported using and experiencing the primary "authentic" learning activities of the YouthAstroNet program.

Colored petri net modeling of small interfering RNA-mediated messenger RNA degradation.

PubMed

Nickaeen, Niloofar; Moein, Shiva; Heidary, Zarifeh; Ghaisari, Jafar

2016-01-01

Mathematical modeling of biological systems is an attractive way for studying complex biological systems and their behaviors. Petri Nets, due to their ability to model systems with various levels of qualitative information, have been wildly used in modeling biological systems in which enough qualitative data may not be at disposal. These nets have been used to answer questions regarding the dynamics of different cell behaviors including the translation process. In one stage of the translation process, the RNA sequence may be degraded. In the process of degradation of RNA sequence, small-noncoding RNA molecules known as small interfering RNA (siRNA) match the target RNA sequence. As a result of this matching, the target RNA sequence is destroyed. In this context, the process of matching and destruction is modeled using Colored Petri Nets (CPNs). The model is constructed using CPNs which allow tokens to have a value or type on them. Thus, CPN is a suitable tool to model string structures in which each element of the string has a different type. Using CPNs, long RNA, and siRNA strings are modeled with a finite set of colors. The model is simulated via CPN Tools. A CPN model of the matching between RNA and siRNA strings is constructed in CPN Tools environment. In previous studies, a network of stoichiometric equations was modeled. However, in this particular study, we modeled the mechanism behind the silencing process. Modeling this kind of mechanisms provides us with a tool to examine the effects of different factors such as mutation or drugs on the process.

Response of phytoplankton to an experimental fish culture in net cages in a subtropical reservoir.

PubMed

Bartozek, E C R; Bueno, N C; Feiden, A; Rodrigues, L C

2016-01-01

This study aimed to evaluate nutrients concentration and spatial-temporal changes in phytoplankton biovolume during an experimental fish culture in net cages in a lateral arm of Salto Caxias reservoir, Brazil. Two sampling stations were placed in the affected lateral arm and other two in a cageless lateral arm. Neither abiotic variables nor phytoplankton biovolume presented significant differences between the treatments. Only temporal changes were confirmed by the analysis performed. Both lateral arms were classified as oligotrophic, reflecting low influence of the net cages. Phytoplankton growth seems to be limited by nitrogen. Biovolume values were, in general, low and five major functional groups were recognized (E, F, G, K and P). In summer higher biovolume values were observed and representatives of Chlorophyceae and Cyanobacteria belonging to the functional groups F and K, respectively, were the most important. In winter phytoplankton was mainly composed by Bacillariophyceae taxa from P group. G group was also restricted to winter and E group occurred in winter and summer. The variations recorded in phytoplankton structure appear to have been mainly influenced by seasonal changes in temperature, precipitation and nutrients availability. The effects of net cages on the abiotic variables and phytoplankton biovolume appear to have been small, probably due to the small number of net cages employed and the system dilution capacity. However, a permanent monitoring of phytoplankton is recommended, since this environment has a carrying capacity, from which the trophic state may increase.

Heterogeneous detection probabilities for imperiled Missouri River fishes: implications for large-river monitoring programs

USGS Publications Warehouse

Schloesser, J.T.; Paukert, Craig P.; Doyle, W.J.; Hill, Tracy D.; Steffensen, K.D.; Travnichek, Vincent H.

2012-01-01

Occupancy modeling was used to determine (1) if detection probabilities (p) for 7 regionally imperiled Missouri River fishes (Scaphirhynchus albus, Scaphirhynchus platorynchus, Cycleptus elongatus, Sander canadensis, Macrhybopsis aestivalis, Macrhybopsis gelida, and Macrhybopsis meeki) differed among gear types (i.e. stationary gill nets, drifted trammel nets, and otter trawls), and (2) how detection probabilities were affected by habitat (i.e. pool, bar, and open water), longitudinal position (five 189 to 367 rkm long segments), sampling year (2003 to 2006), and season (July 1 to October 30 and October 31 to June 30). Adult, large-bodied fishes were best detected with gill nets (p: 0.02–0.74), but most juvenile large-bodied and all small-bodied species were best detected with otter trawls (p: 0.02–0.58). Trammel nets may be a redundant sampling gear for imperiled fishes in the lower Missouri River because most species had greater detection probabilities with gill nets or otter trawls. Detection probabilities varied with river segment for S. platorynchus, C. elongatus, and all small-bodied fishes, suggesting that changes in habitat influenced gear efficiency or abundance changes among river segments. Detection probabilities varied by habitat for adult S. albus and S. canadensis, year for juvenile S. albus, C. elongatus, and S. canadensis, and season for adult S. albus. Concentrating sampling effort on gears with the greatest detection probabilities may increase species detections to better monitor a population's response to environmental change and the effects of management actions on large-river fishes.

Frazzled promotes growth cone attachment at the source of a Netrin gradient in the Drosophila visual system

PubMed Central

Akin, Orkun; Zipursky, S Lawrence

2016-01-01

Axon guidance is proposed to act through a combination of long- and short-range attractive and repulsive cues. The ligand-receptor pair, Netrin (Net) and Frazzled (Fra) (DCC, Deleted in Colorectal Cancer, in vertebrates), is recognized as the prototypical effector of chemoattraction, with roles in both long- and short-range guidance. In the Drosophila visual system, R8 photoreceptor growth cones were shown to require Net-Fra to reach their target, the peak of a Net gradient. Using live imaging, we show, however, that R8 growth cones reach and recognize their target without Net, Fra, or Trim9, a conserved binding partner of Fra, but do not remain attached to it. Thus, despite the graded ligand distribution along the guidance path, Net-Fra is not used for chemoattraction. Based on findings in other systems, we propose that adhesion to substrate-bound Net underlies both long- and short-range Net-Fra-dependent guidance in vivo, thereby eroding the distinction between them. DOI: http://dx.doi.org/10.7554/eLife.20762.001 PMID:27743477

What clinicians are asking pathologists when dealing with lung neuroendocrine neoplasms?

PubMed

Pelosi, Giuseppe; Fabbri, Alessandra; Cossa, Mara; Sonzogni, Angelica; Valeri, Barbara; Righi, Luisella; Papotti, Mauro

2015-11-01

Lung neuroendocrine tumors (NET) are currently classified in resection specimens according to four histological categories, namely typical carcinoid (TC), atypical carcinoid (AC), large-cell neuroendocrine carcinoma (LCNEC) and small cell carcinoma (SCC). Diagnostic criteria have remained unchanged in the 2015 WHO classification, which has ratified the wide acceptance and popularity of such terminology in the pathologists׳ and clinicians׳ community. A unifying umbrella of NE morphology and differentiation has been recognized in lung NET, which has pushed to enter an unique box of invasive tumors along with diffuse idiopathic pulmonary NE cell hyperplasia (DIPNECH) as a pre-invasive lesion with a potential toward the development of carcinoids. However, uncertainties remain in the terminology of lung NET upon small samples, where Ki-67 antigen could play some role to avoid misdiagnosing carcinoids as high-grade NE tumors. Epidemiologic, clinical and genetic traits support a biological three-tier over a pathology four-tier model, according to which TC are low malignancy tumors, AC intermediate malignancy tumors and LCNEC/SCC high malignancy tumors with no significant differences in survival among them. Inconsistencies in diagnostic reproducibility, troubles in the therapy of AC and LCNEC, and limitations to histology within the same tumor category argue in favor of a global re-thinking of lung NET where a grading system could play a role. This review outlines three main key questions in the field of lung NET: (A) unbiased diagnoses, (B) the role of Ki-67 and tumor grading, and (C) management of predictive markers. Answers are still inconclusive, thus additional research is required to improve our understanding on lung NET. Copyright © 2015 Elsevier Inc. All rights reserved.

Environmental Information Sources on the Net.

ERIC Educational Resources Information Center

Raeder, Aggi

1997-01-01

Discusses environmental information needs of business professionals and provides an annotated list of Web sites serving as information sources. Highlights include "meta sites", government, health, law, engineering, education, organizations, and environmental news, as well as selected environmental "hot topics." (AEF)

DialysisNet: Application for Integrating and Management Data Sources of Hemodialysis Information by Continuity of Care Record.

PubMed

Ku, Ho Suk; Kim, Sungho; Kim, HyeHyeon; Chung, Hee-Joon; Park, Yu Rang; Kim, Ju Han

2014-04-01

Health Avatar Beans was for the management of chronic kidney disease and end-stage renal disease (ESRD). This article is about the DialysisNet system in Health Avatar Beans for the seamless management of ESRD based on the personal health record. For hemodialysis data modeling, we identified common data elements for hemodialysis information (CDEHI). We used ASTM continuity of care record (CCR) and ISO/IEC 11179 for the compliance method with a standard model for the CDEHI. According to the contents of the ASTM CCR, we mapped the CDHEI to the contents and created the metadata from that. It was transformed and parsed into the database and verified according to the ASTM CCR/XML schema definition (XSD). DialysisNet was created as an iPad application. The contents of the CDEHI were categorized for effective management. For the evaluation of information transfer, we used CarePlatform, which was developed for data access. The metadata of CDEHI in DialysisNet was exchanged by the CarePlatform with semantic interoperability. The CDEHI was separated into a content list for individual patient data, a contents list for hemodialysis center data, consultation and transfer form, and clinical decision support data. After matching to the CCR, the CDEHI was transformed to metadata, and it was transformed to XML and proven according to the ASTM CCR/XSD. DialysisNet has specific consideration of visualization, graphics, images, statistics, and database. We created the DialysisNet application, which can integrate and manage data sources for hemodialysis information based on CCR standards.

Public-domain-software solution to data-access problems for numerical modelers

USGS Publications Warehouse

Jenter, Harry; Signell, Richard

1992-01-01

Unidata's network Common Data Form, netCDF, provides users with an efficient set of software for scientific-data-storage, retrieval, and manipulation. The netCDF file format is machine-independent, direct-access, self-describing, and in the public domain, thereby alleviating many problems associated with accessing output from large hydrodynamic models. NetCDF has programming interfaces in both the Fortran and C computer language with an interface to C++ planned for release in the future. NetCDF also has an abstract data type that relieves users from understanding details of the binary file structure; data are written and retrieved by an intuitive, user-supplied name rather than by file position. Users are aided further by Unidata's inclusion of the Common Data Language, CDL, a printable text-equivalent of the contents of a netCDF file. Unidata provides numerous operators and utilities for processing netCDF files. In addition, a number of public-domain and proprietary netCDF utilities from other sources are available at this time or will be available later this year. The U.S. Geological Survey has produced and is producing a number of public-domain netCDF utilities.

Recent Advances in Understanding the Sources of Methylmercury to Coastal Waters

NASA Astrophysics Data System (ADS)

Mason, R. P.; Balcom, P.; Chen, C.; Gosnell, K. J.; Jonsson, S.; Mazrui, N.; Ortiz, V.; Seelen, E.; Schartup, A. T.; Sunderland, E. M.

2015-12-01

Understanding the sources of methylmercury (MeHg) to the food chain in coastal waters is important given the related health concerns from consumption of seafood containing elevated MeHg. While water column dissolved or particulate MeHg is the best predictor of bioaccumulation into pelagic organisms in coastal waters, there is debate concerning the dominant sources of MeHg to the water column, and how the relative importance of these sources vary with ecosystem characteristics. Potential sources include both external inputs from the watershed and offshore waters and internal sources (net methylation in sediments and the associated flux of MeHg to the water column and/or net MeHg production in the water column). We will report the results from our various studies in estuarine and coastal waters which have examined the distribution and partitioning of sediment and water column MeHg, and its formation and degradation, across a geographic range from Labrador, Canada to the Chesapeake Bay, USA. The ecosystems studied vary from shallow estuarine bays to deeper systems, and from salt wedge to tidally-dynamic systems. Additionally, both pristine and contaminated environments were examined. The studies examined the factors controlling the net production of MeHg in sediments, and in our more recent work, the potential formation of MeHg in the oxic water column of coastal waters. Sediment measurements (core and grab samples) included both solid phase and porewater MeHg and total mercury (HgT) and important ancillary parameters. Water column parameters included dissolved and particulate MeHg and HgT, TSS, nutrients, and DOC. Stable Hg isotope tracer incubations were used to assess the degree of methylation and demethylation in sediments and surface waters. Average suspended particle MeHg ranged from <5 to 120 pmol/g, and was 1-8% of HgT across sites. Mass balance estimates provide insights into the importance of external MeHg sources to coastal waters. We will use the information to evaluate the following questions: 1) what conditions favor external sources of MeHg over internal production? 2) what conditions enhance net in situ water column formation of MeHg? and 3) what conditions enhance the exchange of MeHg at the sediment/water interface in coastal waters?

Carbon Cycling of Lake Kivu (East Africa): Net Autotrophy in the Epilimnion and Emission of CO2 to the Atmosphere Sustained by Geogenic Inputs

PubMed Central

Borges, Alberto V.; Morana, Cédric; Bouillon, Steven; Servais, Pierre; Descy, Jean-Pierre; Darchambeau, François

2014-01-01

We report organic and inorganic carbon distributions and fluxes in a large (>2000 km2) oligotrophic, tropical lake (Lake Kivu, East Africa), acquired during four field surveys, that captured the seasonal variations (March 2007–mid rainy season, September 2007–late dry season, June 2008–early dry season, and April 2009–late rainy season). The partial pressure of CO2 (pCO2) in surface waters of the main basin of Lake Kivu showed modest spatial (coefficient of variation between 3% and 6%), and seasonal variations with an amplitude of 163 ppm (between 579±23 ppm on average in March 2007 and 742±28 ppm on average in September 2007). The most prominent spatial feature of the pCO2 distribution was the very high pCO2 values in Kabuno Bay (a small sub-basin with little connection to the main lake) ranging between 11213 ppm and 14213 ppm (between 18 and 26 times higher than in the main basin). Surface waters of the main basin of Lake Kivu were a net source of CO2 to the atmosphere at an average rate of 10.8 mmol m−2 d−1, which is lower than the global average reported for freshwater, saline, and volcanic lakes. In Kabuno Bay, the CO2 emission to the atmosphere was on average 500.7 mmol m−2 d−1 (∼46 times higher than in the main basin). Based on whole-lake mass balance of dissolved inorganic carbon (DIC) bulk concentrations and of its stable carbon isotope composition, we show that the epilimnion of Lake Kivu was net autotrophic. This is due to the modest river inputs of organic carbon owing to the small ratio of catchment area to lake surface area (2.15). The carbon budget implies that the CO2 emission to the atmosphere must be sustained by DIC inputs of geogenic origin from deep geothermal springs. PMID:25314144

Quantifying the source-sink balance and carbohydrate content in three tomato cultivars.

PubMed

Li, Tao; Heuvelink, Ep; Marcelis, Leo F M

2015-01-01

Supplementary lighting is frequently applied in the winter season for crop production in greenhouses. The effect of supplementary lighting on plant growth depends on the balance between assimilate production in source leaves and the overall capacity of the plants to use assimilates. This study aims at quantifying the source-sink balance and carbohydrate content of three tomato cultivars differing in fruit size, and to investigate to what extent the source/sink ratio correlates with the potential fruit size. Cultivars Komeet (large size), Capricia (medium size), and Sunstream (small size, cherry tomato) were grown from 16 August to 21 November, at similar crop management as in commercial practice. Supplementary lighting (High Pressure Sodium lamps, photosynthetic active radiation at 1 m below lamps was 162 μmol photons m(-2) s(-1); maximum 10 h per day depending on solar irradiance level) was applied from 19 September onward. Source strength was estimated from total plant growth rate using periodic destructive plant harvests in combination with the crop growth model TOMSIM. Sink strength was estimated from potential fruit growth rate which was determined from non-destructively measuring the fruit growth rate at non-limiting assimilate supply, growing only one fruit on each truss. Carbohydrate content in leaves and stems were periodically determined. During the early growth stage, 'Komeet' and 'Capricia' showed sink limitation and 'Sunstream' was close to sink limitation. During this stage reproductive organs had hardly formed or were still small and natural irradiance was high (early September) compared to winter months. Subsequently, during the fully fruiting stage all three cultivars were strongly source-limited as indicated by the low source/sink ratio (average source/sink ratio from 50 days after planting onward was 0.17, 0.22, and 0.33 for 'Komeet,' 'Capricia,' and 'Sunstream,' respectively). This was further confirmed by the fact that pruning half of the fruits hardly influenced net leaf photosynthesis rates. Carbohydrate content in leaves and stems increased linearly with the source/sink ratio. We conclude that during the early growth stage under high irradiance, tomato plants are sink-limited and that the level of sink limitation differs between cultivars but it is not correlated with their potential fruit size. During the fully fruiting stage tomato plants are source-limited and the extent of source limitation of a cultivar is positively correlated with its potential fruit size.

ANTARES and KM3NeT programs for the supernova neutrino detection

NASA Astrophysics Data System (ADS)

Kulikovskiy, Vladimir

2017-02-01

The currently working ANTARES neutrino telescope has capabilities to detect neutrinos produced in astrophysical transient sources. Neutrino alerts are regularly generated to trigger multi-wavelength observatories. Potential sources include gamma-ray bursts, core-collapse supernovae, and flaring active galactic nuclei. In particular, the neutrino detection together with the multi-wavelength observations may reveal hidden jets in the supernova explosions. Supernovae remnants are currently the most promising acceleration sites of the cosmic rays in our Galaxy. The neutrino emission is expected during the cosmic ray interaction with the surrounding matter. The neutrino telescopes in the Northern hemisphere have excellent visibility to the most of the galactic supernovae remnants. Recent results on the search for point-sources with the ANTARES detector and the prospects for the future KM3NeT detector are presented. Although ANTARES and KM3NeT detectors are mainly designed for high energy neutrino detection, the MeV neutrino signal from the supernova can be identified as a simultaneous increase of the counting rate of the optical modules in the detector. The noise from the optical background due to 40K decay in the sea water and the bioluminescence can be significantly reduced by using nanosecond coincidences between the nearby placed photomultipliers. This technique has been tested with the ANTARES storeys, each one consisting of three 10-inch photomultipliers, and it is further optimized for the KM3NeT telescope where the directional optical modules containing 31 3-inch photomultipliers provide very promising expectations.

Submesoscale hotspots of productivity and respiration: Insights from high-resolution oxygen and fluorescence sections

NASA Astrophysics Data System (ADS)

Stanley, Rachel H. R.; McGillicuddy, Dennis J.; Sandwith, Zoe O.; Pleskow, Haley M.

2017-12-01

Modeling studies have shown that mesoscale and submesoscale processes can stimulate phytoplankton productivity and export production. Here, we present observations from an undulating, towed Video Plankton Recorder (VPR-II) in the tropical Atlantic. The VPR-II collected profiles of oxygen, fluorescence, temperature and salinity in the upper 140 m of the water column at a spatial resolution of 1 m in the vertical and <2 km in the horizontal. The data reveal remarkable "hotspots", i.e. locations 5-10 km wide which have elevated fluorescence and decreased oxygen, both of which are likely the result of intense submesoscale upwelling. Based on estimates of source water, estimated from identical temperature and salinity surfaces, hotspots are more often areas of net respiration than areas of net production - although the inferred changes in oxygen are subject to uncertainty in the determination of the source of the upwelled waters since the true source water may not have been sampled. We discuss the spatial distribution of these hotspots and present a conceptual model outlining their possible generation and decline. Simultaneous measurements of O2/Ar in the mixed layer from a shipboard mass spectrometer provide estimates of rates of surface net community production. We find that the subsurface biological hotspots are often expressed as an increase in mixed layer rates of net community production. Overall, the large number of these hotspots support the growing evidence that submesoscale processes are important drivers in upper ocean biological production.

Reconciling carbon-cycle concepts, terminology, and methodology

Treesearch

F.S. III Chapin; G.M Woodwell; J.T. Randerson; G.M. Lovett; E.B. Rastetter; D.D. Baldocchi; D.A. Clark; M.E. Harmon; D.S. Schimel; Valentini R.; Wirth C.; Aber J.D.; Cole J.J.; Goulden M.L.; Harden J.W.; Heimann M.; Howarth R.W.; Matson P.A.; McGuire A.D.; Melillo J.M.; H.A. Mooney; J.C. Neff; R.A. Houghton; M.L. Pace; M.G. Ryan; S.W. Running; O.E. Sala; W.H. Schlesinger; E. D. Schulze

2005-01-01

Recent projections of climatic change have focused a great deal of scientific and public attention on patterns of carbon (C) cycling as well as its controls, particularly the factors that determine whether an ecosystem is a net source or sink of atmospheric carbon dioxide (CO2). Net ecosystem production (NEP), a central concept in C-cycling research, has been used by...

Interannual, seasonal, and retrospective analysis of the methane and carbon dioxide budgets of a temperate peatland

Treesearch

D.M. Olson; T.J. Griffis; A. Noormets; R. Kolka; J. Chen

2013-01-01

Three years (2009-2011) of near-continuous methane (CH4) and carbon dioxide (CO2) fluxes were measured with the eddy covariance (EC) technique at a temperate peatland located within the Marcell Experimental Forest, in northern Minnesota, USA. The peatland was a net source of CH4 and a net sink of CO...

Shadow netWorkspace: An Open Source Intranet for Learning Communities

ERIC Educational Resources Information Center

Laffey, James M.; Musser, Dale

2006-01-01

Shadow netWorkspace (SNS) is a web application system that allows a school or any type of community to establish an intranet with network workspaces for all members and groups. The goal of SNS has been to make it easy for schools and other educational organizations to provide network services in support of implementing a learning community. SNS is…

Comparison of net global warming potential and greenhouse gas intensity affected by management practices in two dryland cropping sites

USDA-ARS?s Scientific Manuscript database

Little is known about the effect of management practices on net global warming potential (GWP) and greenhouse gas intensity (GHGI) that account for all sources and sinks of greenhouse gas (GHG) emissions in dryland cropping systems. The objective of this study was to compare the effect of a combinat...

A global meta-analysis on the impact of management practices on net global warming potential and greenhouse gas intensity from cropland soils

USDA-ARS?s Scientific Manuscript database

Agricultural practices contribute significant amount of greenhouse gas (GHG) emissions, but little is known about their effects on net global warming potential (GWP) and greenhouse gas intensity (GHGI) that account for all sources and sinks of carbon dioxide emissions per unit area or crop yield. Se...

Less-Educated Workers' Unstable Employment: Can the Safety Net Help? Fast Focus. No. 19-2014

ERIC Educational Resources Information Center

Hill, Heather D.; Ybarra, Marci A.

2014-01-01

Since the 1980s, U.S. workers with less than a college education have faced increasing job instability at the same time that the safety net has become increasingly contingent on employment. The sources of instability are many, including variable schedules, not enough hours, and temporary employment. A policy forum hosted by the Employment…

Attribution of net carbon change by disturbance type across forest lands of the conterminous United States

Treesearch

N. L. Harris; S. C. Hagen; S. S. Saatchi; T. R. H. Pearson; Christopher W. Woodall; Grant M. Domke; B. H. Braswell; Brian F. Walters; S. Brown; W. Salas; A. Fore; Y. Yu

2016-01-01

Background: Locating terrestrial sources and sinks of carbon (C) will be critical to developing strategies that contribute to the climate change mitigation goals of the Paris Agreement. Here we present spatially resolved estimates of net C change across United States (US) forest lands between 2006 and 2010 and attribute them to natural and anthropogenic processes....

MoleculeNet: a benchmark for molecular machine learning† †Electronic supplementary information (ESI) available. See DOI: 10.1039/c7sc02664a

PubMed Central

Wu, Zhenqin; Ramsundar, Bharath; Feinberg, Evan N.; Gomes, Joseph; Geniesse, Caleb; Pappu, Aneesh S.; Leswing, Karl

2017-01-01

Molecular machine learning has been maturing rapidly over the last few years. Improved methods and the presence of larger datasets have enabled machine learning algorithms to make increasingly accurate predictions about molecular properties. However, algorithmic progress has been limited due to the lack of a standard benchmark to compare the efficacy of proposed methods; most new algorithms are benchmarked on different datasets making it challenging to gauge the quality of proposed methods. This work introduces MoleculeNet, a large scale benchmark for molecular machine learning. MoleculeNet curates multiple public datasets, establishes metrics for evaluation, and offers high quality open-source implementations of multiple previously proposed molecular featurization and learning algorithms (released as part of the DeepChem open source library). MoleculeNet benchmarks demonstrate that learnable representations are powerful tools for molecular machine learning and broadly offer the best performance. However, this result comes with caveats. Learnable representations still struggle to deal with complex tasks under data scarcity and highly imbalanced classification. For quantum mechanical and biophysical datasets, the use of physics-aware featurizations can be more important than choice of particular learning algorithm. PMID:29629118

The role of livestock-poached pasture as a sediment source

NASA Astrophysics Data System (ADS)

Greenwood, Philip; Walling, Desmond; Quine, Timothy

2015-04-01

Historically, the occurrence of sediment-laden runoff has almost exclusively been associated with cultivated hillslopes and particularly with arable land. This association was commonly accompanied by the presumption that, in comparison with cultivated slopes, erosion from intensively-managed lowland pasture was relatively low. Recent developments in sediment source tracing and fingerprinting techniques have, however, challenged these assumptions by demonstrating that soil loss from grasslands may be greater than previously assumed. In attempting to identify potential source areas within grassland environments, attention has frequently focused on areas of livestock poaching where herd animals tend to congregate. However, the role of poached grassland as a sediment-source remains uncertain. Reasons include the difficulties associated with accurately documenting the movement or redistribution of small quantities of fine sediment over relevant spatial and temporal scales. Motivated by an urgent need for such information, this communication presents preliminary results from a tracing study aimed at measuring sediment redistribution within areas of poached pasture over short (i.e. event-based) timescales using the artificial radionuclides, caesium-134 (134Cs) and cobalt-60 (60Co). The approach involved labelling six small areas (0.2 * 0.2 m) of poached soil, each with a contrasting gradient, with either 134Cs or 60Co, and then measuring changes in the radiometric inventory at predetermined points before and after periods of rainfall. Each labelled area of poached pasture was measured on three separate occasions over a 65 day period. At the end of the monitoring phase, the mean net soil redistribution depth (mm) was negative for all plots, with values ranging from -6.8 mm to -15.2 mm. This is interpreted as evidence of the removal, or erosion, of surface material. The findings indicate that areas of livestock-poached pasture can act as significant sediment sources. These findings are discussed with regard to the potential contribution of poaching to the off-site transfer of fine-sediment from affected grasslands, and to the implications for the water quality of receiving streams.

The Added Diagnostic Value of 18F-Fluorodihydroxyphenylalanine PET/CT in the Preoperative Work-Up of Small Bowel Neuroendocrine Tumors.

PubMed

Addeo, Pietro; Poncet, Gilles; Goichot, Bernard; Leclerc, Loic; Brigand, Cécile; Mutter, Didier; Romain, Benoit; Namer, Izzie-Jacques; Bachellier, Philippe; Imperiale, Alessio

2018-04-01

The precise localization of the primary tumor and/or the identification of multiple primary tumors improves the preoperative work-up in patients with small bowel (SB) neuroendocrine tumor (NET). The present study assesses the diagnostic value of 18 F-fluorodihydroxyphenylalanine ( 18 F-FDOPA) positron emission tomography/computed tomography (PET/CT) during the preoperative wok-up of SB NETs. Between January 2010 and June 2017, all consecutive patients with SB NETs undergoing preoperative 18 F-FDOPA PET/CT and successive resection were analyzed. Preoperative work-up included computed tomography (CT), somatostatin receptor scintigraphy (SRS), and 18 F-FDOPA PET/CT. Sensitivity and accuracy ratio for primary and multiple tumor detection were compared with data from surgery and pathology. There were 17 consecutive patients with SB NETs undergoing surgery. Nine patients (53%) had multiple tumors, 15 (88%) metastatic lymph nodes, 3 (18%) peritoneal carcinomatosis, and 9 patients (53%) liver metastases. A total of 70 SB NETs were found by pathology. Surgery identified the primary in 17/17 (100%) patients and recognized seven of 9 patients (78%) with multiple synchronous SB. Preoperatively, 18 F-FDOPA PET/CT displayed a statistically significant higher sensitivity for primary tumor localization (100 vs. 23.5 vs. 29.5%) and multiple tumor detection (78 vs. 22 vs. 11%) over SRS and CT. Compared with pathology, 18 F-FDOPA PET/CT displayed the highest accuracy ratio for number of tumor detected over CT and SRS (2.0 ± 2.2 vs. 0.4 ± 0.7 vs. 0.6 ± 1.5, p = 0.0003). 18 F-FDOPA PET/CT significantly increased the sensitivity and accuracy for primary and multiple SB NET identification. 18 F-FDOPA PET/CT should be included systematically in the preoperative work-up of SB NET.

Loss of Chromosome 18 in Neuroendocrine Tumors of the Small Intestine: The Enigma Remains.

PubMed

Nieser, Maike; Henopp, Tobias; Brix, Joachim; Stoß, Laura; Sitek, Barbara; Naboulsi, Wael; Anlauf, Martin; Schlitter, Anna M; Klöppel, Günter; Gress, Thomas; Moll, Roland; Bartsch, Detlef K; Heverhagen, Anna E; Knoefel, Wolfram T; Kaemmerer, Daniel; Haybaeck, Johannes; Fend, Falko; Sperveslage, Jan; Sipos, Bence

2017-01-01

Neuroendocrine tumors of the small intestine (SI-NETs) exhibit an increasing incidence and high mortality rate. Until now, no fundamental molecular event has been linked to the tumorigenesis and progression of these tumors. Only the loss of chromosome 18 (Chr18) has been shown in up to two thirds of SI-NETs, whereby the significance of this alteration is still not understood. We therefore performed the first comprehensive study to identify Chr18-related events at the genetic, epigenetic and gene/protein expression levels. We did expression analysis of all seven putative Chr18-related tumor suppressors by quantitative real-time PCR (qRT-PCR), Western blot and immunohistochemistry. Next-generation exome sequencing and SNP array analysis were performed with five SI-NETs with (partial) loss of Chr18. Finally, we analyzed all microRNAs (miRNAs) located on Chr18 by qRT-PCR, comparing Chr18+/- and Chr18+/+ SI-NETs. Only DCC (deleted in colorectal cancer) revealed loss of/greatly reduced expression in 6/21 cases (29%). No relevant loss of SMAD2, SMAD4, elongin A3 and CABLES was detected. PMAIP1 and maspin were absent at the protein level. Next-generation sequencing did not reveal relevant recurrent somatic mutations on Chr18 either in an exploratory cohort of five SI-NETs, or in a validation cohort (n = 30). SNP array analysis showed no additional losses. The quantitative analysis of all 27 Chr18-related miRNAs revealed no difference in expression between Chr18+/- and Chr18+/+ SI-NETs. DCC seems to be the only Chr18-related tumor suppressor affected by the monoallelic loss of Chr18 resulting in a loss of DCC protein expression in one third of SI-NETs. No additional genetic or epigenetic alterations were present on Chr18. © 2016 S. Karger AG, Basel.

Calibrating the social value of prospective new goods: The case of hydrogen fuel cell electric Vehicles

NASA Astrophysics Data System (ADS)

Topel, Robert H.

2018-01-01

Economic studies of the value of a new good or product innovation are typically retrospective: after a new good has been developed and marketed to consumers, data on prices and consumer choices can be used to estimate welfare gains. This paper calibrates the prospective welfare gains in the United States from a nascent vehicle platform, fuel cell electric vehicles (FCVs), that may or may not succeed in competition with existing vehicle platforms. Prospective gains are due to three main sources: (1) possibly reduced carbon emissions compared to existing vehicle alternatives; (2) the monopsony benefit to the U.S. from reducing world oil demand and hence the price of oil; (3) national security benefits due to reduced "oil dependence", mitigating the impact of oil price shocks on national income. I find that the benefits of reduced carbon emissions are likely to be quite small because reduced oil demand in the U.S. as only a small impact on world oil consumption and carbon emissions. Net monopsony benefits to U.S. consumers are much larger.

75 FR 56124 - Notice of Issuance of Final Determination Concerning APC InfraStruXure® Solutions and of Certain...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-09-15

.... It also features output metering, branch current/circuit monitoring and auto-detection by the Infra...). Small system: 1 40 kW N+1 Symmetra PX UPS 1 40 kW InfraStruXure PDU with pre-fabricated circuits 10 Net...Xure PDU with pre-fabricated circuits 50 NetShelter SX enclosures 50 Rack power distribution units 16...

Skewness and kurtosis of net baryon-number distributions at small values of the baryon chemical potential

DOE PAGES

Bazavov, A.; Ding, H. -T.; Hegde, P.; ...

2017-10-27

In this paper, we present results for the ratios of mean (M B), variance (σmore » $$2\\atop{B}$$), skewness (S B) and kurtosis (κ B) of net baryon-number fluctuations obtained in lattice QCD calculations with physical values of light and strange quark masses. Using next-to-leading order Taylor expansions in baryon chemical potential we find that qualitative features of these ratios closely resemble the corresponding experimentally measured cumulants ratios of net proton-number fluctuations for beam energies down to √sNN ≥ 19.6 GeV. We show that the difference in cumulant ratios for the mean net baryon-number, M B/σ$$2\\atop{B}$$ = χ$$B\\atop{1}$$ (T, µ B)/χ$$B\\atop{2}$$ (T, µ B) and the normalized skewness, S Bσ B = χ$$B\\atop{3}$$ (T, µB)/χ2 (T, µB ), nat-urally arises in QCD thermodynamics. Moreover, we establish a close relation between skewness and kurtosis ratios, S Bσ$$B\\atop{3}$$/M B = χ$$B\\atop{3}$$ (T, µ B)/χ$$B\\atop{1}$$ (T,µ B) and κ Bσ$$2\\atop{B}$$ = χ$$B\\atop{4}$$ (T,μ B)/χ$$B\\atop{2}$$ (T,μ B), valid at small values of the baryon chemical potential.« less

Skewness and kurtosis of net baryon-number distributions at small values of the baryon chemical potential

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bazavov, A.; Ding, H. -T.; Hegde, P.

In this paper, we present results for the ratios of mean (M B), variance (σmore » $$2\\atop{B}$$), skewness (S B) and kurtosis (κ B) of net baryon-number fluctuations obtained in lattice QCD calculations with physical values of light and strange quark masses. Using next-to-leading order Taylor expansions in baryon chemical potential we find that qualitative features of these ratios closely resemble the corresponding experimentally measured cumulants ratios of net proton-number fluctuations for beam energies down to √sNN ≥ 19.6 GeV. We show that the difference in cumulant ratios for the mean net baryon-number, M B/σ$$2\\atop{B}$$ = χ$$B\\atop{1}$$ (T, µ B)/χ$$B\\atop{2}$$ (T, µ B) and the normalized skewness, S Bσ B = χ$$B\\atop{3}$$ (T, µB)/χ2 (T, µB ), nat-urally arises in QCD thermodynamics. Moreover, we establish a close relation between skewness and kurtosis ratios, S Bσ$$B\\atop{3}$$/M B = χ$$B\\atop{3}$$ (T, µ B)/χ$$B\\atop{1}$$ (T,µ B) and κ Bσ$$2\\atop{B}$$ = χ$$B\\atop{4}$$ (T,μ B)/χ$$B\\atop{2}$$ (T,μ B), valid at small values of the baryon chemical potential.« less

Modelling the combined impacts of climate change and direct anthropogenic drivers on the ecosystem of the northwest European continental shelf

NASA Astrophysics Data System (ADS)

Wakelin, Sarah L.; Artioli, Yuri; Butenschön, Momme; Allen, J. Icarus; Holt, Jason T.

2015-12-01

The potential response of the marine ecosystem of the northwest European continental shelf to climate change under a medium emissions scenario (SRES A1B) is investigated using the coupled hydrodynamics-ecosystem model POLCOMS-ERSEM. Changes in the near future (2030-2040) and the far future (2082-2099) are compared to the recent past (1983-2000). The sensitivity of the ecosystem to potential changes in multiple anthropogenic drivers (river nutrient loads and benthic trawling) in the near future is compared to the impact of changes in climate. With the exception of the biomass of benthic organisms, the influence of the anthropogenic drivers only exceeds the impact of climate change in coastal regions. Increasing river nitrogen loads has a limited impact on the ecosystem whilst reducing river nitrogen and phosphate concentrations affects net primary production (netPP) and phytoplankton and zooplankton biomass. Direct anthropogenic forcing is seen to mitigate/amplify the effects of climate change. Increasing river nitrogen has the potential to amplify the effects of climate change at the coast by increasing netPP. Reducing river nitrogen and phosphate mitigates the effects of climate change for netPP and the biomass of small phytoplankton and large zooplankton species but amplifies changes in the biomass of large phytoplankton and small zooplankton.

Precision of channel catfish catch estimates using hoop nets in larger Oklahoma reservoirs

USGS Publications Warehouse

Stewart, David R.; Long, James M.

2012-01-01

Hoop nets are rapidly becoming the preferred gear type used to sample channel catfish Ictalurus punctatus, and many managers have reported that hoop nets effectively sample channel catfish in small impoundments (<200 ha). However, the utility and precision of this approach in larger impoundments have not been tested. We sought to determine how the number of tandem hoop net series affected the catch of channel catfish and the time involved in using 16 tandem hoop net series in larger impoundments (>200 ha). Hoop net series were fished once, set for 3 d; then we used Monte Carlo bootstrapping techniques that allowed us to estimate the number of net series required to achieve two levels of precision (relative standard errors [RSEs] of 15 and 25) at two levels of confidence (80% and 95%). Sixteen hoop net series were effective at obtaining an RSE of 25 with 80% and 95% confidence in all but one reservoir. Achieving an RSE of 15 was often less effective and required 18-96 hoop net series given the desired level of confidence. We estimated that an hour was needed, on average, to deploy and retrieve three hoop net series, which meant that 16 hoop net series per reservoir could be "set" and "retrieved" within a day, respectively. The estimated number of net series to achieve an RSE of 25 or 15 was positively associated with the coefficient of variation (CV) of the sample but not with reservoir surface area or relative abundance. Our results suggest that hoop nets are capable of providing reasonably precise estimates of channel catfish relative abundance and that the relationship with the CV of the sample reported herein can be used to determine the sampling effort for a desired level of precision.

Soil carbon stocks and their rates of accumulation and loss in a boreal forest landscape

USGS Publications Warehouse

Rapalee, G.; Trumbore, S.E.; Davidson, E.A.; Harden, J.W.; Veldhuis, H.

1998-01-01

Boreal forests and wetlands are thought to be significant carbon sinks, and they could become net C sources as the Earth warms. Most of the C of boreal forest ecosystems is stored in the moss layer and in the soil. The objective of this study was to estimate soil C stocks (including moss layers) and rates of accumulation and loss for a 733 km2 area of the BOReal Ecosystem-Atmosphere Study site in northern Manitoba, using data from smaller-scale intensive field studies. A simple process-based model developed from measurements of soil C inventories and radiocarbon was used to relate soil C storage and dynamics to soil drainage and forest stand age. Soil C stocks covary with soil drainage class, with the largest C stocks occurring in poorly drained sites. Estimated rates of soil C accumulation or loss are sensitive to the estimated decomposition constants for the large pool of deep soil C, and improved understanding of deep soil C decomposition is needed. While the upper moss layers regrow and accumulate C after fires, the deep C dynamics vary across the landscape, from a small net sink to a significant source. Estimated net soil C accumulation, averaged for the entire 733 km2 area, was 20 g C m-2 yr-1 (28 g C m-2 yr-1 accumulation in surface mosses offset by 8 g C m-2 yr-1 lost from deep C pools) in a year with no fire. Most of the C accumulated in poorly and very poorly drained soils (peatlands and wetlands). Burning of the moss layer in only 1% of uplands would offset the C stored in the remaining 99% of the area. Significant interannual variability in C storage is expected because of the irregular occurrence of fire in space and time. The effects of climate change and management on fire frequency and on decomposition of immense deep soil C stocks are key to understanding future C budgets in boreal forests.

The evaluation of web-based data collection for enhanced surveillance of cryptosporidiosis.

PubMed

Viney, Kerri A; McAnulty, Jeremy M

2008-01-01

Following an increase in the number of people diagnosed with cryptosporidiosis in November 2005, the Communicable Diseases Branch initiated enhanced surveillance using a developmental version of NetEpi Collection, an open-source, web-based data collection tool. We evaluated the usefulness of NetEpi Collection for enhanced surveillance, using the Centers for Disease Control and Prevention's Updated Guidelines for Evaluating Public Health Surveillance Systems as a guide. Most staff (73 per cent) who used NetEpi Collection found it easy to use. Although ongoing support was thought to be adequate by 82 per cent of respondents who used NetEpi Collection, 36 per cent reported that training was limited and 27 per cent reported technical problems such as internet, server and password problems. In order to improve its usefulness in enhanced surveillance, training in NetEpi Collection should be enhanced and the stability of the system improved.

Do HMO and its for-profit expansion jeopardize the survival of hospital safety net services?

PubMed

Shen, Yu-Chu

2009-03-01

This study examines the effect of health maintenance organizations (HMOs) and for-profit HMO share on the survival of safety net services in hospitals between 1990 and 2004. The primary data sources are the American Hospital Association Annual Surveys, the Medicare hospital cost reports, and the HMO enrollment and ownership data from Interstudy. I analyze the risks of shutting down each safety net service separately using the proportional hazard models. I find that the risks of shutting down hospital safety net services do not vary by different levels of overall HMO penetration. However, conditional on the overall HMO penetration level, increasing for-profit presence of HMO does increase the risks of shutting down several safety net services. Policies evaluating the for-profit expansion or ownership conversion of health plans should take this potential adverse effect into consideration.

Source apportionment modeling of volatile organic compounds in streams

USGS Publications Warehouse

Pankow, J.F.; Asher, W.E.; Zogorski, J.S.

2006-01-01

It often is of interest to understand the relative importance of the different sources contributing to the concentration cw of a contaminant in a stream; the portions related to sources 1, 2, 3, etc. are denoted cw,1, cw,2, cw,3, etc. Like c w, 'he fractions ??1, = cw,1/c w, ??2 = cw,2/cw, ??3 = cw,3/cw, etc. depend on location and time. Volatile organic compounds (VOCs) can undergo absorption from the atmosphere into stream water or loss from stream water to the atmosphere, causing complexities affecting the source apportionment (SA) of VOCs in streams. Two SA rules are elaborated. Rule 1: VOC entering a stream across the air/water interface exclusively is assigned to the atmospheric portion of cw. Rule 2: VOC loss by volatilization, flow loss to groundwater, in-stream degradation, etc. is distributed over cw,1 cw,2, c w,3, etc. in proportion to their corresponding ?? values. How the two SA rules are applied, as well as the nature of the SA output for a given case, will depend on whether transport across the air/water interface is handled using the net flux F convention or using the individual fluxes J convention. Four hypothetical stream cases involving acetone, methyl-tert-butyl ether (MTBE), benzene, chloroform, and perchloroethylene (PCE) are considered. Acetone and MTBE are sufficiently water soluble from air for a domestic atmospheric source to be capable of yielding cw values approaching the common water quality guideline range of 1 to 10 ??g/L. For most other VOCs, such levels cause net outgassing (F > 0). When F > 0 in a given section of stream, in the net flux convention, all of the ??j, for the compound remain unchanged over that section while cw decreases. A characteristic time ??d can be calculated to predict when there will be differences between SA results obtained by the net flux convention versus the individual fluxes convention. Source apportionment modeling provides the framework necessary for comparing different strategies for mitigating contamination at points of interest along a stream. ?? 2006 SETAC.

Quantifying air distribution, ventilation effectiveness and airborne pollutant transport in an aircraft cabin mockup

NASA Astrophysics Data System (ADS)

Wang, Aijun

The health, safety and comfort of passengers during flight inspired this research into cabin air quality, which is closely related to its airflow distribution, ventilation effectiveness and airborne pollutant transport. The experimental facility is a full-scale aircraft cabin mockup. A volumetric particle tracking velocimetry (VPTV) technique was enhanced by incorporating a self-developed streak recognition algorithm. Two stable recirculation regions, the reverse flows above the seats and the main air jets from the air supply inlets formed the complicated airflow patterns inside the cabin mockup. The primary air flow was parallel to the passenger rows. The small velocity component in the direction of the cabin depth caused less net air exchange between the passenger rows than that parallel to the passenger rows. Different total air supply rate changed the developing behaviors of the main air jets, leading to different local air distribution patterns. Two indices, Local mean age of air and ventilation effectiveness factor (VEF), were measured at five levels of air supply rate and two levels of heating load. Local mean age of air decreased linearly with an increase in the air supply rate, while the VEF remained consistent when the air supply rate varied. The thermal buoyancy force from the thermal plume generated the upside plume flow, opposite to the main jet flow above the boundary seats and thus lowered the local net air exchange. The airborne transport dynamics depends on the distance between the source and the receptors, the relative location of pollutant source, and air supply rate. Exposure risk was significantly reduced with increased distance between source and receptors. Another possible way to decrease the exposure risk was to position the release source close to the exhaust outlets. Increasing the air supply rate could be an effective solution under some emergency situations. The large volume of data regarding the three-dimensional air velocities was visualized in the CAVE virtual environment. ShadowLight, a virtual reality application was used to import and navigate the velocity vectors through the virtual airspace. A real world demonstration and an active interaction with the three-dimensional air velocity data have been established.

Carbon Transformations and Source - Sink Dynamics along a River, Marsh, Estuary, Ocean Continuum

NASA Astrophysics Data System (ADS)

Anderson, I. C.; Crosswell, J.; Czapla, K.; Van Dam, B.

2017-12-01

Estuaries, the transition zone between land and the coastal ocean, are highly dynamic systems in which carbon sourced from watersheds, marshes, atmosphere, and ocean may be transformed, sequestered, or exported. The net fate of carbon in estuaries, governed by the interactions of biotic and physical drivers varying on spatial and temporal scales, is currently uncertain because of limited observational data. In this study, conducted in a temperate, microtidal, and shallow North Carolina USA estuary, carbon exchanges via river, tributary, and fringing salt marsh, air-water fluxes, sediment C accumulation, and metabolism were monitored over two-years, with sharply different amounts of rainfall. Air-water CO2 fluxes and metabolic variables were simultaneously measured in channel and shoal by conducting high-resolution surveys at dawn, dusk and the following dawn. Marsh CO2 exchanges, sediment C inputs, and lateral exports of DIC and DOC were also measured. Carbon flows between estuary regions and export to the coastal ocean were calculated by quantifying residual transport of DIC and TOC down-estuary as flows were modified by sources, sinks and internal transformations. Variation in metabolic rates, CO2, TOC and DIC exchanges were large when determined for short time and limited spatial scales. However, when scaled to annual and whole estuarine scales, variation tended to decrease because of counteracting metabolic rates and fluxes between channel and shoal or between seasons. Although overall salt marshes accumulated OC, they were a negligible source of DIC and DOC to the estuary, and net inputs of C to the marsh were mainly derived from sediment OC. These results, as observed in other observational studies of estuaries, show that riverine input, light, temperature and metabolism are major controls on carbon cycling. Comparison of our results with other types of estuaries varying in depth, latitude, and nutrification demonstrates large discrepancies underscoring the limitations of current sampling designs, models and datasets in representing system-scale diversity; thus, a more practical approach may be to choose a small number of representative coastal systems, coordinate research efforts to quantify the relevant fluxes and constrain a range of environmental conditions that influence carbon cycling.

cMapper: gene-centric connectivity mapper for EBI-RDF platform.

PubMed

Shoaib, Muhammad; Ansari, Adnan Ahmad; Ahn, Sung-Min

2017-01-15

In this era of biological big data, data integration has become a common task and a challenge for biologists. The Resource Description Framework (RDF) was developed to enable interoperability of heterogeneous datasets. The EBI-RDF platform enables an efficient data integration of six independent biological databases using RDF technologies and shared ontologies. However, to take advantage of this platform, biologists need to be familiar with RDF technologies and SPARQL query language. To overcome this practical limitation of the EBI-RDF platform, we developed cMapper, a web-based tool that enables biologists to search the EBI-RDF databases in a gene-centric manner without a thorough knowledge of RDF and SPARQL. cMapper allows biologists to search data entities in the EBI-RDF platform that are connected to genes or small molecules of interest in multiple biological contexts. The input to cMapper consists of a set of genes or small molecules, and the output are data entities in six independent EBI-RDF databases connected with the given genes or small molecules in the user's query. cMapper provides output to users in the form of a graph in which nodes represent data entities and the edges represent connections between data entities and inputted set of genes or small molecules. Furthermore, users can apply filters based on database, taxonomy, organ and pathways in order to focus on a core connectivity graph of their interest. Data entities from multiple databases are differentiated based on background colors. cMapper also enables users to investigate shared connections between genes or small molecules of interest. Users can view the output graph on a web browser or download it in either GraphML or JSON formats. cMapper is available as a web application with an integrated MySQL database. The web application was developed using Java and deployed on Tomcat server. We developed the user interface using HTML5, JQuery and the Cytoscape Graph API. cMapper can be accessed at http://cmapper.ewostech.net Readers can download the development manual from the website http://cmapper.ewostech.net/docs/cMapperDocumentation.pdf. Source Code is available at https://github.com/muhammadshoaib/cmapperContact:smahn@gachon.ac.krSupplementary information: Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Control of Wind Tunnel Operations Using Neural Net Interpretation of Flow Visualization Records

NASA Technical Reports Server (NTRS)

Buggele, Alvin E.; Decker, Arthur J.

1994-01-01

Neural net control of operations in a small subsonic/transonic/supersonic wind tunnel at Lewis Research Center is discussed. The tunnel and the layout for neural net control or control by other parallel processing techniques are described. The tunnel is an affordable, multiuser platform for testing instrumentation and components, as well as parallel processing and control strategies. Neural nets have already been tested on archival schlieren and holographic visualizations from this tunnel as well as recent supersonic and transonic shadowgraph. This paper discusses the performance of neural nets for interpreting shadowgraph images in connection with a recent exercise for tuning the tunnel in a subsonic/transonic cascade mode of operation. That mode was operated for performing wake surveys in connection with NASA's Advanced Subsonic Technology (AST) noise reduction program. The shadowgraph was presented to the neural nets as 60 by 60 pixel arrays. The outputs were tunnel parameters such as valve settings or tunnel state identifiers for selected tunnel operating points, conditions, or states. The neural nets were very sensitive, perhaps too sensitive, to shadowgraph pattern detail. However, the nets exhibited good immunity to variations in brightness, to noise, and to changes in contrast. The nets are fast enough so that ten or more can be combined per control operation to interpret flow visualization data, point sensor data, and model calculations. The pattern sensitivity of the nets will be utilized and tested to control wind tunnel operations at Mach 2.0 based on shock wave patterns.

Optimization of Training Sets for Neural-Net Processing of Characteristic Patterns from Vibrating Solids

NASA Technical Reports Server (NTRS)

Decker, Arthur J.

2001-01-01

Artificial neural networks have been used for a number of years to process holography-generated characteristic patterns of vibrating structures. This technology depends critically on the selection and the conditioning of the training sets. A scaling operation called folding is discussed for conditioning training sets optimally for training feed-forward neural networks to process characteristic fringe patterns. Folding allows feed-forward nets to be trained easily to detect damage-induced vibration-displacement-distribution changes as small as 10 nm. A specific application to aerospace of neural-net processing of characteristic patterns is presented to motivate the conditioning and optimization effort.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kaminsky, G.; Belanger, David P.; Ye, Feng

We use polarized neutron scattering to characterize the Bragg scattering intensity below T C=89.5 K at the (1,0,0) pseudocubic nuclear Bragg point of LaCoO 3. Upon cooling in a field (FC), a net magnetic moment is apparent in Bragg scattering intensity, just as it was in previous magnetization measurements. Critical behavior associated with the net moment near T C upon cooling in small applied fields rapidly rounds with increasing field strength. We show, using a mean-field calculation, that this net moment can develop in a metastable state that forms upon FC, even when all the interactions in the system aremore » antiferromagnetic.« less

Air-Seawater Exchange of Organochlorine Pesticides along the Sediment Plume of a Large Contaminated River.

PubMed

Lin, Tian; Guo, Zhigang; Li, Yuanyuan; Nizzetto, Luca; Ma, Chuanliang; Chen, Yingjun

2015-05-05

Gaseous exchange fluxes of organochlorine pesticides (OCPs) across the air-water interface of the coastal East China Sea were determined in order to assess whether the contaminated plume of the Yangtze River could be an important regional source of OCPs to the atmosphere. Hexachlorocyclohexanes (HCHs), chlordane compounds (CHLs), and dichlorodiphenyltrichloroethanes (DDTs) were the most frequently detected OCPs in air and water. Air-water exchange was mainly characterized by net volatilization for all measured OCPs. The net gaseous exchange flux ranged 10-240 ng/(m2·day) for γ-HCH, 60-370 ng/(m2·day) for trans-CHL, 97-410 ng/(m2·day) for cis-CHL, and ∼0 (e.g., equilibrium) to 490 ng/(m2·day) for p,p'-DDE. We found that the plume of the large contaminated river can serve as a significant regional secondary atmospheric source of legacy contaminants released in the catchment. In particular, the sediment plume represented the relevant source of DDT compounds (especially p,p'-DDE) sustaining net degassing when clean air masses from the open ocean reached the plume area. In contrast, a mass balance showed that, for HCHs, contaminated river discharge (water and sediment) plumes were capable of sustaining volatilization throughout the year. These results demonstrate the inconsistencies in the fate of HCHs and DDTs in this large estuarine system with declining primary sources.

Ion cyclotron range of frequencies heating of plasma with small impurity production

DOEpatents

Ohkawa, Tihiro

1987-01-01

Plasma including plasma ions is magnetically confined by a magnetic field. The plasma has a defined outer surface and is intersected by resonance surfaces of respective common ion cyclotron frequency of a predetermined species of plasma ions moving in the magnetic field. A radio frequency source provides radio frequency power at a radio frequency corresponding to the ion cyclotron frequency of the predetermined species of plasma ions moving in the field at a respective said resonance surface. RF launchers coupled to the radio frequency source radiate radio frequency energy at the resonance frequency onto the respective resonance surface within the plasma from a plurality of locations located outside the plasma at such respective distances from the intersections of the respective resonance surface and the defined outer surface and at such relative phases that the resulting interference pattern provides substantially null net radio frequency energy over regions near and including substantial portions of the intersections relative to the radio frequency energy provided thereby at other portions of the respective resonance surface within the plasma.

The Effects of Lightning NO(x) Production during the July 21 EULINOX Storm studied with a 3-D Cloud-scale Chemical Transport Model

NASA Technical Reports Server (NTRS)

Ott, Lesley E.; Pickering, Kenneth E.; Stenchikov, Georgiy L.; Huntrieser, Heidi; Schumann, Ulrich

2006-01-01

The July 21,1998 thunderstonn observed during the European Lightning Nitrogen Oxides Project (EULINOX) project was simulated using the three-dimensional Goddard Cumulus Ensemble (GCE) model. The simulation successfully reproduced a number of observed storm features including the splitting of the original cell into a southern cell which developed supercell characteristics, and a northern cell which became multicellular. Output from the GCE simulation was used to drive an offline cloud-scale chemical transport model which calculates tracer transport and includes a parameterization of lightning NO(x) production which uses observed flash rates as input. Estimates of lightning NO(x) production were deduced by assuming various values of production per intracloud and production per cloud-to-ground flash and comparing the results with in-cloud aircraft observations. The assumption that both types of flashes produce 360 moles of NO per flash on average compared most favorably with column mass and probability distribution functions calculated from observations. This assumed production per flash corresponds to a global annual lightning NOx source of 7 Tg N per yr. Chemical reactions were included in the model to evaluate the impact of lightning NO(x), on ozone. During the storm, the inclusion of lightning NOx in the model results in a small loss of ozone (on average less than 4 ppbv) at all model levels. Simulations of the chemical environment in the 24 hours following the storm show on average a small increase in the net production of ozone at most levels resulting from lightning NO(x), maximizing at approximately 5 ppbv per day at 5.5 km. Between 8 and 10.5 km, lightning NO(x) causes decreased net ozone production.

Effects of lightning NOx production during the 21 July European Lightning Nitrogen Oxides Project storm studied with a three-dimensional cloud-scale chemical transport model

NASA Astrophysics Data System (ADS)

Ott, Lesley E.; Pickering, Kenneth E.; Stenchikov, Georgiy L.; Huntrieser, Heidi; Schumann, Ulrich

2007-03-01

The 21 July 1998 thunderstorm observed during the European Lightning Nitrogen Oxides Project (EULINOX) project was simulated using the three-dimensional Goddard Cumulus Ensemble (GCE) model. The simulation successfully reproduced a number of observed storm features including the splitting of the original cell into a southern cell which developed supercell characteristics and a northern cell which became multicellular. Output from the GCE simulation was used to drive an offline cloud-scale chemical transport model which calculates tracer transport and includes a parameterization of lightning NOx production which uses observed flash rates as input. Estimates of lightning NOx production were deduced by assuming various values of production per intracloud and production per cloud-to-ground flash and comparing the results with in-cloud aircraft observations. The assumption that both types of flashes produce 360 moles of NO per flash on average compared most favorably with column mass and probability distribution functions calculated from observations. This assumed production per flash corresponds to a global annual lightning NOx source of 7 Tg N yr-1. Chemical reactions were included in the model to evaluate the impact of lightning NOx on ozone. During the storm, the inclusion of lightning NOx in the model results in a small loss of ozone (on average less than 4 ppbv) at all model levels. Simulations of the chemical environment in the 24 hours following the storm show on average a small increase in the net production of ozone at most levels resulting from lightning NOx, maximizing at approximately 5 ppbv day-1 at 5.5 km. Between 8 and 10.5 km, lightning NOx causes decreased net ozone production.

What We Have Learned From 20+ Years of Research on Effects of Drought, Fire and Management on Carbon and Water Dynamics of Pacific Northwest Semi-Arid Forests

NASA Astrophysics Data System (ADS)

Law, B. E.; Berner, L. T.; Kwon, H.; Schmidt, A.

2016-12-01

Eco-climatic heterogeneity and proximity to oceans provides endless learning opportunities for eco-physiologists and modelers alike. We have been conducting measurements and modeling of ecosystem responses to climate and disturbance over Oregon's strong climatic gradient since 1990, and in the Metolius semi-arid region. Some of our findings have challenged common assumptions. Our first flux site was the Metolius old-growth ponderosa pine site (established 1996), followed by flux measurements at clusters of different age forests. We found that the old pine site continued to be an annual net carbon sink, contrary to expectations. Twenty years after stand-replacing disturbance, naturally regenerating young ponderosa pine was still a net carbon source, and a young pine plantation with removed debris (lower decomposition) was a weak sink. Physiological sensitivity to climate varies with tree size. Young pine forests responded to seasonal drought sooner and to a more severe degree. During extreme drought years, old pine showed only a small decline in water transport efficiency (11-24%), whereas efficiency declined by 46% in mature pine, and 80% in young pine. Thus, young trees risk hydraulic failure, which may account for higher mortality in young plantations nearby. Carbon uptake (GPP), soil fluxes, and evapotranspiration (calculated from sapflux or eddy flux data) are strongly coupled in the semi-arid ecosystems, suggesting it is feasible to combine sapflux and soil flux data along with water-use efficiency (GPP/LE) from high quality eddy flux data to estimate NEE in the landscape near flux sites or in patches of forests too small for EC measurements. Highlights show our key findings from development and application of multiple models, including SPA, Biome-BGC and CLM, and ideas for future directions.

[Maximization of economic yield, minimum cost optimal diets and cultivation diversification for small scale farmers of the highland region of Guatemala].

PubMed

Alarcón, J A; Immink, M D; Méndez, L F

1989-12-01

The present study was conducted as part of an evaluation of the economic and nutritional effects of a crop diversification program for small-scale farmers in the Western highlands of Guatemala. Linear programming models are employed in order to obtain optimal combinations of traditional and non-traditional food crops under different ecological conditions that: a) provide minimum cost diets for auto-consumption, and b) maximize net income and market availability of dietary energy. Data used were generated by means of an agroeconomic survey conducted in 1983 among 726 farming households. Food prices were obtained from the Institute of Agrarian Marketing; data on production costs, from the National Bank of Agricultural Development in Guatemala. The gestation periods for each crop were obtained from three different sources, and then averaged. The results indicated that the optimal cropping pattern for the minimum-cost diets for auto consumption include traditional foods (corn, beans, broad bean, wheat, potato), non-traditional foods (carrots, broccoli, beets) and foods of animal origin (milk, eggs). A significant number of farmers included in the sample did not have sufficient land availability to produce all foods included in the minimum-cost diet. Cropping patterns which maximize net incomes include only non-traditional foods: onions, carrots, broccoli and beets for farmers in the low highland areas, and raddish, broccoli, cauliflower and carrots for farmers in the higher parts. Optimal cropping patterns which maximize market availability of dietary energy include traditional and non-traditional foods; for farmers in the lower areas: wheat, corn, beets, carrots and onions; for farmers in the higher areas: potato, wheat, raddish, carrots and cabbage.

Locating and Modeling Regional Earthquakes with Broadband Waveform Data

NASA Astrophysics Data System (ADS)

Tan, Y.; Zhu, L.; Helmberger, D.

2003-12-01

Retrieving source parameters of small earthquakes (Mw < 4.5), including mechanism, depth, location and origin time, relies on local and regional seismic data. Although source characterization for such small events achieves a satisfactory stage in some places with a dense seismic network, such as TriNet, Southern California, a worthy revisit to the historical events in these places or an effective, real-time investigation of small events in many other places, where normally only a few local waveforms plus some short-period recordings are available, is still a problem. To address this issue, we introduce a new type of approach that estimates location, depth, origin time and fault parameters based on 3-component waveform matching in terms of separated Pnl, Rayleigh and Love waves. We show that most local waveforms can be well modeled by a regionalized 1-D model plus different timing corrections for Pnl, Rayleigh and Love waves at relatively long periods, i.e., 4-100 sec for Pnl, and 8-100 sec for surface waves, except for few anomalous paths involving greater structural complexity, meanwhile, these timing corrections reveal similar azimuthal patterns for well-located cluster events, despite their different focal mechanisms. Thus, we can calibrate the paths separately for Pnl, Rayleigh and Love waves with the timing corrections from well-determined events widely recorded by a dense modern seismic network or a temporary PASSCAL experiment. In return, we can locate events and extract their fault parameters by waveform matching for available waveform data, which could be as less as from two stations, assuming timing corrections from the calibration. The accuracy of the obtained source parameters is subject to the error carried by the events used for the calibration. The detailed method requires a Green­_s function library constructed from a regionalized 1-D model together with necessary calibration information, and adopts a grid search strategy for both hypercenter and focal mechanism. We show that the whole process can be easily automated and routinely provide reliable source parameter estimates with a couple of broadband stations. Two applications in the Tibet Plateau and Southern California will be presented along with comparisons of results against other methods.

Response of plant community structure and primary productivity to experimental drought and flooding in an Alaskan fen

Treesearch

Amber C. Churchill; Merritt R. Turetsky; A. David McGuire; Teresa N. Hollingsworth

2015-01-01

Northern peatlands represent a long-term net sink for atmospheric CO2, but these ecosystems can shift from net carbon (C) sinks to sources based on changing climate and environmental conditions. In particular, changes in water availability associated with climate control peatland vegetation and carbon uptake processes. We examined the influence of changing hydrology on...

Army Net Zero Prove Out. Net Zero Waster Best Practices

DTIC Science & Technology

2014-11-18

harvested for non-potable uses such as toilet flushing in buildings, cooling towers and irrigation. Implementation of these solutions should not...potable uses such as toilet flushing in buildings, cooling towers and irrigation. Implementation of these solutions should not increase overall...collection of information is estimated to average 1 hour per response, including the time for reviewing instructions, searching existing data sources

Spatial characteristics of net methylmercury production hot spots in peatlands

Treesearch

Carl P.J. Mitchell; Brian A. Branfireun; Randall K. Kolka

2008-01-01

Many wetlands are sources of methylmercury (MeHg) to surface waters, yet little information exists about the distribution of MeHg within wetlands. Total mercury (THg) and MeHg in peat pore waters were studied in four peatlands in spring, summer, and fall 2005. Marked spatial variability in the distribution of MeHg, and %MeHg as a proxy for net MeHg production, was...

ADOMA: A Command Line Tool to Modify ClustalW Multiple Alignment Output.

PubMed

Zaal, Dionne; Nota, Benjamin

2016-01-01

We present ADOMA, a command line tool that produces alternative outputs from ClustalW multiple alignments of nucleotide or protein sequences. ADOMA can simplify the output of alignments by showing only the different residues between sequences, which is often desirable when only small differences such as single nucleotide polymorphisms are present (e.g., between different alleles). Another feature of ADOMA is that it can enhance the ClustalW output by coloring the residues in the alignment. This tool is easily integrated into automated Linux pipelines for next-generation sequencing data analysis, and may be useful for researchers in a broad range of scientific disciplines including evolutionary biology and biomedical sciences. The source code is freely available at https://sourceforge. net/projects/adoma/. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Exploring the long-term balance between net precipitation and net groundwater exchange in Florida seepage lakes

USGS Publications Warehouse

Lee, Terrie M.; Sacks, Laura A.; Swancar, Amy

2014-01-01

The long-term balance between net precipitation and net groundwater exchange that maintains thousands of seepage lakes in Florida’s karst terrain is explored at a representative lake basin and then regionally for the State’s peninsular lake district. The 15-year water budget of Lake Starr includes El Niño Southern Oscillation (ENSO)-related extremes in rainfall, and provides the longest record of Bowen ratio energy-budget (BREB) lake evaporation and lake-groundwater exchanges in the southeastern United States. Negative net precipitation averaging -25 cm/yr at Lake Starr overturns the previously-held conclusion that lakes in this region receive surplus net precipitation. Net groundwater exchange with the lake was positive on average but too small to balance the net precipitation deficit. Groundwater pumping effects and surface-water withdrawals from the lake widened the imbalance. Satellite-based regional estimates of potential evapotranspiration at five large lakes in peninsular Florida compared well with basin-scale evaporation measurements from seven open-water sites that used BREB methods. The regional average lake evaporation estimated for Lake Starr during 1996-2011 was within 5 percent of its measured average, and regional net precipitation agreed within 10 percent. Regional net precipitation to lakes was negative throughout central peninsular Florida and the net precipitation deficit increased by about 20 cm from north to south. Results indicate that seepage lakes farther south on the peninsula receive greater net groundwater inflow than northern lakes and imply that northern lakes are in comparatively leakier hydrogeologic settings. Findings reveal the peninsular lake district to be more vulnerable than was previously realized to drier climate, surface-water withdrawals from lakes, and groundwater pumping effects.

Consuming fire ants reduces northern bobwhite survival and weight gain

USGS Publications Warehouse

Myers, P.E.; Allen, Craig R.; Birge, Hannah E.

2014-01-01

Northern bobwhite quail, Colinus virginianus (L.) (Galliformes: Odontophoridae), population declines are well documented, but pinpointing the reasons for these decreases has proven elusive. Bobwhite population declines are attributed primarily to loss of habitat and land use changes. This, however, does not entirely explain population declines in areas intensively managed for bobwhites. Although previous research demonstrates the negative impact of red imported fire ant (Solenopsis invicta Buren) (Hymenoptera: Formicidae) on northern bobwhites, the mechanisms underlying this effect are largely unknown. To meet the protein demands of early growth and development, bobwhite chicks predominantly consume small insects, of which ants are a substantial proportion. Fire ants alter ant community dynamics by often reducing native ant diversity and abundance while concurrently increasing the abundance of individuals. Fire ants have negative effects on chicks, but they are also a large potential protein source, making it difficult to disentangle their net effect on bobwhite chicks. To help investigate these effects, we conducted a laboratory experiment to understand (1) whether or not bobwhites consume fire ants, and (2) how the benefits of this consumption compare to the deleterious impacts of bobwhite chick exposure to fire ants. Sixty bobwhite chicks were separated into two groups of 30; one group was provided with starter feed only and the second group was provided with feed and fire ants. Bobwhite chicks were observed feeding on fire ants. Chicks that fed on fire ants had reduced survival and weight gain. Our results show that, while fire ants increase potential food sources for northern bobwhite, their net effect on bobwhite chicks is deleterious. This information will help inform land managers and commercial bobwhite rearing operations.

Neural-Net Processed Characteristic Patterns for Measurement of Structural Integrity of Pressure Cycled Components

NASA Technical Reports Server (NTRS)

Decker, A. J.

2001-01-01

A neural-net inspection process has been combined with a bootstrap training procedure and electronic holography to detect changes or damage in a pressure-cycled International Space Station cold plate to be used for cooling instrumentation. The cold plate was excited to vibrate in a normal mode at low amplitude, and the neural net was trained by example to flag small changes in the mode shape. The NDE (nondestructive-evaluation) technique is straightforward but in its infancy; its applications are ad-hoc and uncalibrated. Nevertheless previous research has shown that the neural net can detect displacement changes to better than 1/100 the maximum displacement amplitude. Development efforts that support the NDE technique are mentioned briefly, followed by descriptions of electronic holography and neural-net processing. The bootstrap training procedure and its application to detection of damage in a pressure-cycled cold plate are discussed. Suggestions for calibrating and quantifying the NDE procedure are presented.

Anaerobic digestion of spring and winter wheat: Comparison of net energy yields.

PubMed

Rincón, Bárbara; Heaven, Sonia; Salter, Andrew M; Banks, Charles J

2016-10-14

Anaerobic digestion of wheat was investigated under batch conditions. The article compares the potential net energy yield between a winter wheat (sown in the autumn) and a spring wheat (sown in the spring) grown in the same year and harvested at the same growth stage in the same farm. The spring wheat had a slightly higher biochemical methane potential and required lower energy inputs in cultivation, but produced a lower dry biomass yield per hectare, which resulted in winter wheat providing the best overall net energy yield. The difference was small; both varieties gave a good net energy yield. Spring sowing may also offer the opportunity for growing an additional over-winter catch crop for spring harvest, thus increasing the overall biomass yield per hectare, with both crops being potential digester feedstocks.

2011 NDIA Advanced Research Projects Agency - Energy/DoD Workshop

DTIC Science & Technology

2011-09-12

the Government to rectify industrial base shortfalls • Synergy of technical and business objectives focused on long- term economic viability and...Earth Materials May Switch From a Net Exporter to a Net Importer Shifting Economics Of Rare Earth Materials Advanced Research Projects Agency • Energy...scale for success – Immature technology and business – Lack of knowledge and patience to do business with government, which is a small customer • DoD

Climate change impacts on sea-air fluxes of CO2 in three Arctic seas: a sensitivity study using Earth observation

NASA Astrophysics Data System (ADS)

Land, P. E.; Shutler, J. D.; Cowling, R. D.; Woolf, D. K.; Walker, P.; Findlay, H. S.; Upstill-Goddard, R. C.; Donlon, C. J.

2013-12-01

We applied coincident Earth observation data collected during 2008 and 2009 from multiple sensors (RA2, AATSR and MERIS, mounted on the European Space Agency satellite Envisat) to characterise environmental conditions and integrated sea-air fluxes of CO2 in three Arctic seas (Greenland, Barents, Kara). We assessed net CO2 sink sensitivity due to changes in temperature, salinity and sea ice duration arising from future climate scenarios. During the study period the Greenland and Barents seas were net sinks for atmospheric CO2, with integrated sea-air fluxes of -36 ± 14 and -11 ± 5 Tg C yr-1, respectively, and the Kara Sea was a weak net CO2 source with an integrated sea-air flux of +2.2 ± 1.4 Tg C yr-1. The combined integrated CO2 sea-air flux from all three was -45 ± 18 Tg C yr-1. In a sensitivity analysis we varied temperature, salinity and sea ice duration. Variations in temperature and salinity led to modification of the transfer velocity, solubility and partial pressure of CO2 taking into account the resultant variations in alkalinity and dissolved organic carbon (DOC). Our results showed that warming had a strong positive effect on the annual integrated sea-air flux of CO2 (i.e. reducing the sink), freshening had a strong negative effect and reduced sea ice duration had a small but measurable positive effect. In the climate change scenario examined, the effects of warming in just over a decade of climate change up to 2020 outweighed the combined effects of freshening and reduced sea ice duration. Collectively these effects gave an integrated sea-air flux change of +4.0 Tg C in the Greenland Sea, +6.0 Tg C in the Barents Sea and +1.7 Tg C in the Kara Sea, reducing the Greenland and Barents sinks by 11% and 53%, respectively, and increasing the weak Kara Sea source by 81%. Overall, the regional integrated flux changed by +11.7 Tg C, which is a 26% reduction in the regional sink. In terms of CO2 sink strength, we conclude that the Barents Sea is the most susceptible of the three regions to the climate changes examined. Our results imply that the region will cease to be a net CO2 sink in the 2050s.

Options for accounting carbon sequestration in German forests

PubMed Central

Krug, Joachim; Koehl, Michael; Riedel, Thomas; Bormann, Kristin; Rueter, Sebastian; Elsasser, Peter

2009-01-01

Background The Accra climate change talks held from 21–27 August 2008 in Accra, Ghana, were part of an ongoing series of meetings leading up to the Copenhagen meeting in December 2009. During the meeting a set of options for accounting carbon sequestration in forestry on a post-2012 framework was presented. The options include gross-net and net-net accounting and approaches for establishing baselines. Results This article demonstrates the embedded consequences of Accra Accounting Options for the case study of German national GHG accounting. It presents the most current assessment of sequestration rates by forest management for the period 1990 – 2007, provides an outlook of future emissions and removals (up to the year 2042) as related to three different management scenarios, and shows that implementation of some Accra options may reverse sources to sinks, or sinks to sources. Conclusion The results of the study highlight the importance of elaborating an accounting system that would prioritize the climate convention goals, not national preferences. PMID:19650896

PolNet: A Tool to Quantify Network-Level Cell Polarity and Blood Flow in Vascular Remodeling.

PubMed

Bernabeu, Miguel O; Jones, Martin L; Nash, Rupert W; Pezzarossa, Anna; Coveney, Peter V; Gerhardt, Holger; Franco, Claudio A

2018-05-08

In this article, we present PolNet, an open-source software tool for the study of blood flow and cell-level biological activity during vessel morphogenesis. We provide an image acquisition, segmentation, and analysis protocol to quantify endothelial cell polarity in entire in vivo vascular networks. In combination, we use computational fluid dynamics to characterize the hemodynamics of the vascular networks under study. The tool enables, to our knowledge for the first time, a network-level analysis of polarity and flow for individual endothelial cells. To date, PolNet has proven invaluable for the study of endothelial cell polarization and migration during vascular patterning, as demonstrated by two recent publications. Additionally, the tool can be easily extended to correlate blood flow with other experimental observations at the cellular/molecular level. We release the source code of our tool under the Lesser General Public License. Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved.

International Halley Watch: Discipline specialists for near-nucleus studies

NASA Technical Reports Server (NTRS)

Larson, S.; Sekanina, Z.; Rahe, J.

1986-01-01

The purpose of the Near-Nucleus Studies Net is to study the processes taking place in the near-nucleus environment as they relate to the nature of nucleus. This is accomplisghed by measuring the spatial and temporal distribution of dust, gases and ions in the coma on high resolution images taken from many observatories around the world. By modeling the motions of discrete dust features in Comet Halley, it is often possible to determine the locations of the emission sources on the surface and learn about the nucleus structure. In addition to the general goals shared by all IHW nets, the scientific goals of the net has been to determine (1)the gross surface structure of the nucleus, (2)the nucleus spin vector, (3)the distribution and evolution of jet sources and (4)the interrelationships between the gas, dust and ion components of the coma. An additional Comet Giacobini-Zinner watch was carried out by the NNSN in support of the NASA International Cometary Explorer flyby.

Options for accounting carbon sequestration in German forests.

PubMed

Krug, Joachim; Koehl, Michael; Riedel, Thomas; Bormann, Kristin; Rueter, Sebastian; Elsasser, Peter

2009-08-03

The Accra climate change talks held from 21-27 August 2008 in Accra, Ghana, were part of an ongoing series of meetings leading up to the Copenhagen meeting in December 2009. During the meeting a set of options for accounting carbon sequestration in forestry on a post-2012 framework was presented. The options include gross-net and net-net accounting and approaches for establishing baselines. This article demonstrates the embedded consequences of Accra Accounting Options for the case study of German national GHG accounting. It presents the most current assessment of sequestration rates by forest management for the period 1990 - 2007, provides an outlook of future emissions and removals (up to the year 2042) as related to three different management scenarios, and shows that implementation of some Accra options may reverse sources to sinks, or sinks to sources. The results of the study highlight the importance of elaborating an accounting system that would prioritize the climate convention goals, not national preferences.

Transformations, Inc.: Partnering to Build Net-Zero Energy Houses in Massachusetts

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ueno, K.; Bergey, D.; Wytrykowska, H.

Transformations, Inc. is a residential development and building company that has partnered with Building Science Corporation to build new construction net-zero energy houses in Massachusetts under the Building America program. There are three communities that will be constructed through this partnership: Devens Sustainable Housing ('Devens'), The Homes at Easthampton Meadow ('Easthampton') andPhase II of the Coppersmith Way Development ('Townsend'). This report intends to cover all of the single-family new construction homes that have been completed to date. The houses built in these developments are net zero energy homes built in a cold climate. They will contribute to finding answers tomore » specific research questions for homes with high R double stud walls and high efficiency ductlessair source heat pump systems ('mini-splits'); allow to explore topics related to the financing of photovoltaic systems and basements vs. slab-on-grade construction; and provide feedback related to the performance of ductless mini-split air source heat pumps.« less

Transformations, Inc.. Partnering To Build Net-Zero Energy Houses in Massachusetts

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ueno, K.; Bergey, D.; Wytrykowska, H.

Transformations, Inc. is a residential development and building company that has partnered with Building Science Corporation to build new construction net-zero energy houses in Massachusetts under the Building America program. There are three communities that will be constructed through this partnership: Devens Sustainable Housing ("Devens"), The Homes at Easthampton Meadow ("Easthampton") and Phase II of the Coppersmith Way Development ("Townsend"). This report intends to cover all of the single-family new construction homes that have been completed to date. The houses built in these developments are net zero energy homes built in a cold climate. They will contribute to finding answersmore » to specific research questions for homes with high R double stud walls and high efficiency ductless air source heat pump systems ("mini-splits"); allow to explore topics related to the financing of photovoltaic systems and basements vs. slab-on-grade construction; and provide feedback related to the performance of ductless mini-split air source heat pumps.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Calva-Tellez, E.; Yennie, D.R.

The Coulomb corrections of relative order Z..cap alpha.. to inelastic electron and muon scattering are examined. Although individual terms are large, the net result is too small to be experimentally significant.

Impact of Nurse Staffing Mandates on Safety-Net Hospitals: Lessons from California

PubMed Central

McHugh, Matthew D; Brooks Carthon, Margo; Sloane, Douglas M; Wu, Evan; Kelly, Lesly; Aiken, Linda H

2012-01-01

Context California is the first and only state to implement a patient-to-nurse ratio mandate for hospitals. Increasing nurse staffing is an important organizational intervention for improving patient outcomes. Evidence suggests that staffing improved in California hospitals after the mandate was enacted, but the outcome for hospitals bearing a disproportionate share of uncompensated care—safety-net hospitals—remains unclear. One concern was that California's mandate would burden safety-net hospitals without improving staffing or that hospitals would reduce their skill mix, that is, the proportion of registered nurses of all nursing staff. We examined the differential effect of California's staffing mandate on safety-net and non-safety-net hospitals. Methods We used a time-series design with Annual Hospital Disclosure data files from the California Office of Statewide Health Planning and Development (OSHPD) for the years 1998 to 2007 to assess differences in the effect of California's mandate on staffing outcomes in safety-net and non-safety-net hospitals. Findings The mandate resulted in significant staffing improvements, on average nearly a full patient per nurse fewer (−0.98) for all California hospitals. The greatest effect was in those hospitals with the lowest staffing levels at the outset, both safety-net and non-safety-net hospitals, as the legislation intended. The mandate led to significantly improved staffing levels for safety-net hospitals, although there was a small but significant difference in the effect on staffing levels of safety-net and non-safety-net hospitals. Regarding skill mix, a marginally higher proportion of registered nurses was seen in non-safety-net hospitals following the mandate, while the skill mix remained essentially unchanged for safety-net hospitals. The difference between the two groups of hospitals was not significant. Conclusions California's mandate improved staffing for all hospitals, including safety-net hospitals. Furthermore, improvement did not come at the cost of a reduced skill mix, as was feared. Alternative and more targeted designs, however, might yield further improvement for safety-net hospitals and reduce potential disparities in the staffing and skill mix of safety-net and non-safety-net hospitals. PMID:22428696

Net acidity indicates the whole effluent toxicity of pH and dissolved metals in metalliferous saline waters.

PubMed

Degens, Bradley P; Krassoi, Rick; Galvin, Lynette; Reynolds, Brad; Micevska, Tina

2018-05-01

Measurements of potential acidity in water are used to manage aquatic toxicity risks of discharge from acid sulfate soils or acid mine drainage. Net acidity calculated from pH, dissolved metals and alkalinity is a common measurement of potential acidity but the relevance of current risk thresholds to aquatic organisms are unclear. Aquatic toxicity testing was carried out using four halophytic organisms with water from four saline sources in southern Western Australia (3 acidic drains and one alkaline river; 39-40 g TDS/L) where acidity was varied by adjusting pH to 4.5-6.5. The test species were brine shrimps (Artemia salina), locally sourced ostracods (Platycypris baueri), microalgae (Dunaliella salina) and amphipods (Allorchestes compressa). Testing found the EC 10 and IC 10 of net acidity ranged from -7.8 to 10.5 mg CaCO 3 /L with no survival or growth of any species at >47 mg CaCO 3 /L. Reduced net acidity indicated reduced whole effluent toxicity more reliably than increased pH alone with organisms tolerating pH up to 1.1 units lower in the absence of dissolved metals. Variation in toxicity indicated by net acidity was mostly attributed to reduced concentrations of dissolved Al and Fe combined with higher pH and alkalinity and some changes in speciation of Al and Fe with pH. These results indicate that rapid in-field assessments of net acidity in acidic, Al dominated waters may be an indicator of potential acute and sub-chronic impacts on aquatic organisms. Crown Copyright © 2018. Published by Elsevier Ltd. All rights reserved.

Space geodesy validation of the global lithospheric flow

NASA Astrophysics Data System (ADS)

Crespi, M.; Cuffaro, M.; Doglioni, C.; Giannone, F.; Riguzzi, F.

2007-02-01

Space geodesy data are used to verify whether plates move chaotically or rather follow a sort of tectonic mainstream. While independent lines of geological evidence support the existence of a global ordered flow of plate motions that is westerly polarized, the Terrestrial Reference Frame (TRF) presents limitations in describing absolute plate motions relative to the mantle. For these reasons we jointly estimated a new plate motions model and three different solutions of net lithospheric rotation. Considering the six major plate boundaries and variable source depths of the main Pacific hotspots, we adapted the TRF plate kinematics by global space geodesy to absolute plate motions models with respect to the mantle. All three reconstructions confirm (i) the tectonic mainstream and (ii) the net rotation of the lithosphere. We still do not know the precise trend of this tectonic flow and the velocity of the differential rotation. However, our results show that assuming faster Pacific motions, as the asthenospheric source of the hotspots would allow, the best lithospheric net rotation estimate is 13.4 +/- 0.7 cm yr-1. This superfast solution seems in contradiction with present knowledge on the lithosphere decoupling, but it matches remarkably better with the geological constraints than those retrieved with slower Pacific motion and net rotation estimates. Assuming faster Pacific motion, it is shown that all plates move orderly `westward' along the tectonic mainstream at different velocities and the equator of the lithospheric net rotation lies inside the corresponding tectonic mainstream latitude band (~ +/-7°), defined by the 1σ confidence intervals.

Transcellular oxalate and Cl− absorption in mouse intestine is mediated by the DRA anion exchanger Slc26a3, and DRA deletion decreases urinary oxalate

PubMed Central

Freel, Robert W.; Whittamore, Jonathan M.

2013-01-01

Active transcellular oxalate transport in the mammalian intestine contributes to the homeostasis of this important lithogenic anion. Several members of the Slc26a gene family of anion exchangers have a measurable oxalate affinity and are expressed along the gut, apically and basolaterally. Mouse Slc26a6 (PAT1) targets to the apical membrane of enterocytes in the small intestine, and its deletion results in net oxalate absorption and hyperoxaluria. Apical exchangers of the Slc26a family that mediate oxalate absorption have not been established, yet the Slc26a3 [downregulated in adenoma (DRA)] protein is a candidate mediator of oxalate uptake. We evaluated the role of DRA in intestinal oxalate and Cl− transport by comparing unidirectional and net ion fluxes across short-circuited segments of small (ileum) and large (cecum and distal colon) intestine from wild-type (WT) and DRA knockout (KO) mice. In WT mice, all segments demonstrated net oxalate and Cl− absorption to varying degrees. In KO mice, however, all segments exhibited net anion secretion, which was consistently, and solely, due to a significant reduction in the absorptive unidirectional fluxes. In KO mice, daily urinary oxalate excretion was reduced 66% compared with that in WT mice, while urinary creatinine excretion was unchanged. We conclude that DRA mediates a predominance of the apical uptake of oxalate and Cl− absorbed in the small and large intestine of mice under short-circuit conditions. The large reductions in urinary oxalate excretion underscore the importance of transcellular intestinal oxalate absorption, in general, and, more specifically, the importance of the DRA exchanger in oxalate homeostasis. PMID:23886857

Alternative polyadenylation of tumor suppressor genes in small intestinal neuroendocrine tumors.

PubMed

Rehfeld, Anders; Plass, Mireya; Døssing, Kristina; Knigge, Ulrich; Kjær, Andreas; Krogh, Anders; Friis-Hansen, Lennart

2014-01-01

The tumorigenesis of small intestinal neuroendocrine tumors (SI-NETs) is poorly understood. Recent studies have associated alternative polyadenylation (APA) with proliferation, cell transformation, and cancer. Polyadenylation is the process in which the pre-messenger RNA is cleaved at a polyA site and a polyA tail is added. Genes with two or more polyA sites can undergo APA. This produces two or more distinct mRNA isoforms with different 3' untranslated regions. Additionally, APA can also produce mRNAs containing different 3'-terminal coding regions. Therefore, APA alters both the repertoire and the expression level of proteins. Here, we used high-throughput sequencing data to map polyA sites and characterize polyadenylation genome-wide in three SI-NETs and a reference sample. In the tumors, 16 genes showed significant changes of APA pattern, which lead to either the 3' truncation of mRNA coding regions or 3' untranslated regions. Among these, 11 genes had been previously associated with cancer, with 4 genes being known tumor suppressors: DCC, PDZD2, MAGI1, and DACT2. We validated the APA in three out of three cases with quantitative real-time-PCR. Our findings suggest that changes of APA pattern in these 16 genes could be involved in the tumorigenesis of SI-NETs. Furthermore, they also point to APA as a new target for both diagnostic and treatment of SI-NETs. The identified genes with APA specific to the SI-NETs could be further tested as diagnostic markers and drug targets for disease prevention and treatment.

Alternative Polyadenylation of Tumor Suppressor Genes in Small Intestinal Neuroendocrine Tumors

PubMed Central

Rehfeld, Anders; Plass, Mireya; Døssing, Kristina; Knigge, Ulrich; Kjær, Andreas; Krogh, Anders; Friis-Hansen, Lennart

2014-01-01

The tumorigenesis of small intestinal neuroendocrine tumors (SI-NETs) is poorly understood. Recent studies have associated alternative polyadenylation (APA) with proliferation, cell transformation, and cancer. Polyadenylation is the process in which the pre-messenger RNA is cleaved at a polyA site and a polyA tail is added. Genes with two or more polyA sites can undergo APA. This produces two or more distinct mRNA isoforms with different 3′ untranslated regions. Additionally, APA can also produce mRNAs containing different 3′-terminal coding regions. Therefore, APA alters both the repertoire and the expression level of proteins. Here, we used high-throughput sequencing data to map polyA sites and characterize polyadenylation genome-wide in three SI-NETs and a reference sample. In the tumors, 16 genes showed significant changes of APA pattern, which lead to either the 3′ truncation of mRNA coding regions or 3′ untranslated regions. Among these, 11 genes had been previously associated with cancer, with 4 genes being known tumor suppressors: DCC, PDZD2, MAGI1, and DACT2. We validated the APA in three out of three cases with quantitative real-time-PCR. Our findings suggest that changes of APA pattern in these 16 genes could be involved in the tumorigenesis of SI-NETs. Furthermore, they also point to APA as a new target for both diagnostic and treatment of SI-NETs. The identified genes with APA specific to the SI-NETs could be further tested as diagnostic markers and drug targets for disease prevention and treatment. PMID:24782827

Quantifying the impacts of piñon mortality on ecosystem-scale carbon and water cycling: a twinned flux tower approach

NASA Astrophysics Data System (ADS)

Fox, A. M.; Litvak, M. E.; McDowell, N.; Rahn, T.; Ryan, M. G.

2010-12-01

Piñon-juniper (PJ) woodlands, which occupy 24 million ha throughout the Southwest, proved to be extremely vulnerable to an extended drought that began in 1999, leading to an abrupt die-off of 40 to 95% of piñon pine (Pinus edulis) and 2-25% of juniper (Juniperus monosperma) in less than 3 years. Climate predictions for the region suggest such droughts are likely to become more frequent and widespread in the future, extending northwards. Such large-scale change in vegetation has the potential to trigger rapid changes in ecosystem carbon dynamics and the local and regional hydrologic cycle. We are using a twinned ecosystem-scale manipulation study to quantify the transient dynamics of carbon and water flux responses to piñon mortality. A combination of eddy covariance, soil respiration and moisture, sap flow and biomass carbon pool measurements are being made at an undisturbed PJ woodland (control) site and at a manipulation site within 2 miles of the control where all piñon trees greater than 7 cm diameter at breast height within the 4 ha flux footprint were killed in September 2009 using girdling and herbicide injection following 6 months of background measurements. We hypothesis that piñon mortality alters the local scale carbon cycle by shifting a large stock of carbon from productive biomass to detritus, leading to an initial decrease in net primary production and an increase in ecosystem respiration and net carbon flux to the atmosphere. However, reduced competition for water in these water-limited ecosystems and increased light availability may lead to compensatory growth in surviving small piñon, juniper and understory vegetation, offsetting or exceeding the expected reduction in NPP from piñon mortality. Because litter and coarse woody debris are slow to decompose in semiarid environments we hypothesize that the manipulation site will continue to be net carbon sources even after NPP recovers. Our general hypothesis for the local scale water cycle is that piñon mortality will alter the vertical and horizontal pattern of infiltration of precipitation and the sources and patterns of water use by remaining small piñon, juniper, understory vegetation and surface evaporation. Pinon mortality may not significantly alter cumulative ecosystem evaportranspiration, but associated changes in litter, bare soil fraction and replacement vegetation will likely alter seasonal variation in evaporation, transpiration and water-use efficiency. Here we present an initial analysis contrasting ecosystem response to environmental drivers pre- and post-manipulation and between manipulation and control sites, identifying and quantifying the impacts of piñon mortality over naturally occurring inter-annual and inter-site variability.

Net production of oxygen in the subtropical ocean.

PubMed

Riser, Stephen C; Johnson, Kenneth S

2008-01-17

The question of whether the plankton communities in low-nutrient regions of the ocean, comprising 80% of the global ocean surface area, are net producers or consumers of oxygen and fixed carbon is a key uncertainty in the global carbon cycle. Direct measurements in bottle experiments indicate net oxygen consumption in the sunlit zone, whereas geochemical evidence suggests that the upper ocean is a net source of oxygen. One possible resolution to this conflict is that primary production in the gyres is episodic and thus difficult to observe: in this model, oligotrophic regions would be net consumers of oxygen during most of the year, but strong, brief events with high primary production rates might produce enough fixed carbon and dissolved oxygen to yield net production as an average over the annual cycle. Here we examine the balance of oxygen production over three years at sites in the North and South Pacific subtropical gyres using the new technique of oxygen sensors deployed on profiling floats. We find that mixing events during early winter homogenize the upper water column and cause low oxygen concentrations. Oxygen then increases below the mixed layer at a nearly constant rate that is similar to independent measures of net community production. This continuous oxygen increase is consistent with an ecosystem that is a net producer of fixed carbon (net autotrophic) throughout the year, with episodic events not required to sustain positive oxygen production.

Peptidylarginine deiminase inhibition is immunomodulatory and vasculoprotective in murine lupus

PubMed Central

Knight, Jason S.; Zhao, Wenpu; Luo, Wei; Subramanian, Venkataraman; O’Dell, Alexander A.; Yalavarthi, Srilakshmi; Hodgin, Jeffrey B.; Eitzman, Daniel T.; Thompson, Paul R.; Kaplan, Mariana J.

2013-01-01

Recent evidence suggests that enhanced neutrophil extracellular trap (NET) formation activates plasmacytoid dendritic cells and serves as a source of autoantigens in SLE. We propose that aberrant NET formation is also linked to organ damage and to the premature vascular disease characteristic of human SLE. Here, we demonstrate enhanced NET formation in the New Zealand mixed 2328 (NZM) model of murine lupus. NZM mice also developed autoantibodies to NETs as well as the ortholog of human cathelicidin/LL37 (CRAMP), a molecule externalized in the NETs. NZM mice were treated with Cl-amidine, an inhibitor of peptidylarginine deiminases (PAD), to block NET formation and were evaluated for lupus-like disease activity, endothelial function, and prothrombotic phenotype. Cl-amidine treatment inhibited NZM NET formation in vivo and significantly altered circulating autoantibody profiles and complement levels while reducing glomerular IgG deposition. Further, Cl-amidine increased the differentiation capacity of bone marrow endothelial progenitor cells, improved endothelium-dependent vasorelaxation, and markedly delayed time to arterial thrombosis induced by photochemical injury. Overall, these findings suggest that PAD inhibition can modulate phenotypes crucial for lupus pathogenesis and disease activity and may represent an important strategy for mitigating cardiovascular risk in lupus patients. PMID:23722903

Amplification of seismic waves beneath active volcanoes

NASA Astrophysics Data System (ADS)

Navon, O.; Lensky, N. G.; Collier, L.; Neuberg, J.; Lyakhovsky, V.

2003-04-01

Long-period (LP) seismic events are typical of many volcanoes and are attributed to energy leaking from waves traveling through the volcanic conduit or along the conduit - country-rock interface. The LP events are triggered locally, at the volcanic edifice, but the source of energy for the formation of tens of events per day is not clear. Energy may be supplied by volatile-release from a supersaturated melt. If bubbles are present in equilibrium with the melt in the conduit, and the melt is suddenly decompressed, transfer of volatiles from the supersaturated melt into the bubbles transforms stored potential energy into expansion work. For example, small dome collapses may decompress the conduit by a few bars and lead to solubility decrease, exsolution of volatiles and, consequently, to work done by the expansion of the bubbles under pressure. This energy is released over a timescale that is similar to that of LP events and may amplify the original weak seismic signals associated with the collapse. Using the formulation of Lensky et al. (2002), following the decompression, when the transfer of volatiles into bubbles is fast enough, expansion accelerates and the bulk viscosity of the bubbly magma is negative. New calculations show that under such conditions a sinusoidal P-wave is amplified. We note that seismic waves created by tectonic earthquakes that are not associated with net decompression, do not lead to net release of volatiles or to net expansion. In this case, the bulk viscosity is positive and waves traveling through the magma should attenuate. The proposed model explains how weak seismic signals may be amplified as they travel through a conduit that contains supersaturated bubbly magma. It provides the general framework for amplifying volcanic seismicity such as the signals associated with long-period events.

CellNetVis: a web tool for visualization of biological networks using force-directed layout constrained by cellular components.

PubMed

Heberle, Henry; Carazzolle, Marcelo Falsarella; Telles, Guilherme P; Meirelles, Gabriela Vaz; Minghim, Rosane

2017-09-13

The advent of "omics" science has brought new perspectives in contemporary biology through the high-throughput analyses of molecular interactions, providing new clues in protein/gene function and in the organization of biological pathways. Biomolecular interaction networks, or graphs, are simple abstract representations where the components of a cell (e.g. proteins, metabolites etc.) are represented by nodes and their interactions are represented by edges. An appropriate visualization of data is crucial for understanding such networks, since pathways are related to functions that occur in specific regions of the cell. The force-directed layout is an important and widely used technique to draw networks according to their topologies. Placing the networks into cellular compartments helps to quickly identify where network elements are located and, more specifically, concentrated. Currently, only a few tools provide the capability of visually organizing networks by cellular compartments. Most of them cannot handle large and dense networks. Even for small networks with hundreds of nodes the available tools are not able to reposition the network while the user is interacting, limiting the visual exploration capability. Here we propose CellNetVis, a web tool to easily display biological networks in a cell diagram employing a constrained force-directed layout algorithm. The tool is freely available and open-source. It was originally designed for networks generated by the Integrated Interactome System and can be used with networks from others databases, like InnateDB. CellNetVis has demonstrated to be applicable for dynamic investigation of complex networks over a consistent representation of a cell on the Web, with capabilities not matched elsewhere.

Effects of harvest, fire, and pest/pathogen disturbances on the West Cascades ecoregion carbon balance.

PubMed

Turner, David P; Ritts, William D; Kennedy, Robert E; Gray, Andrew N; Yang, Zhiqiang

2015-12-01

Disturbance is a key influence on forest carbon dynamics, but the complexity of spatial and temporal patterns in forest disturbance makes it difficult to quantify their impacts on carbon flux over broad spatial domains. Here we used a time series of Landsat remote sensing images and a climate-driven carbon cycle process model to evaluate carbon fluxes at the ecoregion scale in western Oregon. Thirteen percent of total forest area in the West Cascades ecoregion was disturbed during the reference interval (1991-2010). The disturbance regime was dominated by harvesting (59 % of all area disturbed), with lower levels of fire (23 %), and pest/pathogen mortality (18 %). Ecoregion total Net Ecosystem Production was positive (a carbon sink) in all years, with greater carbon uptake in relatively cool years. Localized carbon source areas were associated with recent harvests and fire. Net Ecosystem Exchange (including direct fire emissions) showed greater interannual variation and became negative (a source) in the highest fire years. Net Ecosystem Carbon Balance (i.e. change in carbon stocks) was more positive on public that private forestland, because of a lower disturbance rate, and more positive in the decade of the 1990s than in the warmer and drier 2000s because of lower net ecosystem production and higher direct fire emissions in the 2000s. Despite recurrent disturbances, the West Cascades ecoregion has maintained a positive carbon balance in recent decades. The high degree of spatial and temporal resolution in these simulations permits improved attribution of regional carbon sources and sinks.

TOWARD ERROR ANALYSIS OF LARGE-SCALE FOREST CARBON BUDGETS

EPA Science Inventory

Quantification of forest carbon sources and sinks is an important part of national inventories of net greenhouse gas emissions. Several such forest carbon budgets have been constructed, but little effort has been made to analyse the sources of error and how these errors propagate...

A Smallholder Socio-hydrological Modelling Framework

NASA Astrophysics Data System (ADS)

Pande, S.; Savenije, H.; Rathore, P.

2014-12-01

Small holders are farmers who own less than 2 ha of farmland. They often have low productivity and thus remain at subsistence level. A fact that nearly 80% of Indian farmers are smallholders, who merely own a third of total farmlands and belong to the poorest quartile, but produce nearly 40% of countries foodgrains underlines the importance of understanding the socio-hydrology of a small holder. We present a framework to understand the socio-hydrological system dynamics of a small holder. It couples the dynamics of 6 main variables that are most relevant at the scale of a small holder: local storage (soil moisture and other water storage), capital, knowledge, livestock production, soil fertility and grass biomass production. The model incorporates rule-based adaptation mechanisms (for example: adjusting expenditures on food and fertilizers, selling livestocks etc.) of small holders when they face adverse socio-hydrological conditions, such as low annual rainfall, higher intra-annual variability in rainfall or variability in agricultural prices. It allows us to study sustainability of small holder farming systems under various settings. We apply the framework to understand the socio-hydrology of small holders in Aurangabad, Maharashtra, India. This district has witnessed suicides of many sugarcane farmers who could not extricate themselves out of the debt trap. These farmers lack irrigation and are susceptible to fluctuating sugar prices and intra-annual hydroclimatic variability. This presentation discusses two aspects in particular: whether government interventions to absolve the debt of farmers is enough and what is the value of investing in local storages that can buffer intra-annual variability in rainfall and strengthening the safety-nets either by creating opportunities for alternative sources of income or by crop diversification.

Recapture Heterogeneity in Cliff Swallows: Increased Exposure to Mist Nets Leads to Net Avoidance

PubMed Central

Roche, Erin A.; Brown, Charles R.; Brown, Mary Bomberger; Lear, Kristen M.

2013-01-01

Ecologists often use mark-recapture to estimate demographic variables such as abundance, growth rate, or survival for samples of wild animal populations. A common assumption underlying mark-recapture is that all animals have an equal probability of detection, and failure to meet or correct for this assumption–as when certain members of the population are either easier or more difficult to capture than other animals–can lead to biased and inaccurate demographic estimates. We built within-year and among-years Cormack-Jolly-Seber recaptures-only models to identify causes of capture heterogeneity for a population of colonially nesting cliff swallows (Petrochelidon pyrrhonota) caught using mist-netting as a part of a 20-year mark-recapture study in southwestern Nebraska, U.S.A. Daily detection of cliff swallows caught in stationary mist nets at their colony sites declined as the birds got older and as the frequency of netting at a site within a season increased. Experienced birds’ avoidance of the net could be countered by sudden disturbances that startled them into a net, such as when we dropped a net over the side of a bridge or flushed nesting cliff swallows into a stationary net positioned at a colony entrance. Our results support the widely held, but seldom tested, belief that birds learn to avoid stationary mist nets over time, but also show that modifications of traditional field methods can reduce this source of recapture heterogeneity. PMID:23472138

Department of Defense Companies Participating in the Department of Defense Subcontracting Program, First Quarter Fiscal Year 1994

DTIC Science & Technology

1994-01-01

disadvantaged businesses. Approximately 1,000 companies report these data each quarter during a fiscal year. The report has section for each of the Military...subcontracting surveillance review, net value of subcontract awards, and the amount and percent of awards to small and small disadvantaged businesses. The

78 FR 57058 - Federal Housing Administration (FHA) Approval of Lending Institutions and Mortgagees: Streamlined...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-17

... federal banking agencies and reduce the cost of participating in FHA programs by releasing small... retained earnings, a statement of cash flows, an analysis of the lender's or mortgagee's net worth adjusted...: Streamlined Reporting Requirements for Small Supervised Lenders and Mortgagees AGENCY: Office of the Assistant...

Estimating uncertainties in watershed studies

Treesearch

John Campbell; Ruth Yanai; Mark Green

2011-01-01

Small watersheds have been used widely to quantify chemical fluxes and cycling in terrestrial ecosystems for about the past half century. The small watershed approach has been valuable in characterizing hydrologic and nutrient budgets, for instance, in estimating the net gain or loss of solutes in response to disturbance. However, the uncertainty in these ecosystem...

Two-stream Convolutional Neural Network for Methane Emissions Quantification

NASA Astrophysics Data System (ADS)

Wang, J.; Ravikumar, A. P.; McGuire, M.; Bell, C.; Tchapmi, L. P.; Brandt, A. R.

2017-12-01

Methane, a key component of natural gas, has a 25x higher global warming potential than carbon dioxide on a 100-year basis. Accurately monitoring and mitigating methane emissions require cost-effective detection and quantification technologies. Optical gas imaging, one of the most commonly used leak detection technology, adopted by Environmental Protection Agency, cannot estimate leak-sizes. In this work, we harness advances in computer science to allow for rapid and automatic leak quantification. Particularly, we utilize two-stream deep Convolutional Networks (ConvNets) to estimate leak-size by capturing complementary spatial information from still plume frames, and temporal information from plume motion between frames. We build large leak datasets for training and evaluating purposes by collecting about 20 videos (i.e. 397,400 frames) of leaks. The videos were recorded at six distances from the source, covering 10 -60 ft. Leak sources included natural gas well-heads, separators, and tanks. All frames were labeled with a true leak size, which has eight levels ranging from 0 to 140 MCFH. Preliminary analysis shows that two-stream ConvNets provides significant accuracy advantage over single steam ConvNets. Spatial stream ConvNet can achieve an accuracy of 65.2%, by extracting important features, including texture, plume area, and pattern. Temporal stream, fed by the results of optical flow analysis, results in an accuracy of 58.3%. The integration of the two-stream ConvNets gives a combined accuracy of 77.6%. For future work, we will split the training and testing datasets in distinct ways in order to test the generalization of the algorithm for different leak sources. Several analytic metrics, including confusion matrix and visualization of key features, will be used to understand accuracy rates and occurrences of false positives. The quantification algorithm can help to find and fix super-emitters, and improve the cost-effectiveness of leak detection and repair programs.

Design and Validation of an Open-Source, Partial Task Trainer for Endonasal Neuro-Endoscopic Skills Development: Indian Experience.

PubMed

Singh, Ramandeep; Baby, Britty; Damodaran, Natesan; Srivastav, Vinkle; Suri, Ashish; Banerjee, Subhashis; Kumar, Subodh; Kalra, Prem; Prasad, Sanjiva; Paul, Kolin; Anand, Sneh; Kumar, Sanjeev; Dhiman, Varun; Ben-Israel, David; Kapoor, Kulwant Singh

2016-02-01

Box trainers are ideal simulators, given they are inexpensive, accessible, and use appropriate fidelity. The development and validation of an open-source, partial task simulator that teaches the fundamental skills necessary for endonasal skull-base neuro-endoscopic surgery. We defined the Neuro-Endo-Trainer (NET) SkullBase-Task-GraspPickPlace with an activity area by analyzing the computed tomography scans of 15 adult patients with sellar suprasellar parasellar tumors. Four groups of participants (Group E, n = 4: expert neuroendoscopists; Group N, n =19: novice neurosurgeons; Group R, n = 11: neurosurgery residents with multiple iterations; and Group T, n = 27: neurosurgery residents with single iteration) performed grasp, pick, and place tasks using NET and were graded on task completion time and skills assessment scale score. Group E had lower task completion times and greater skills assessment scale scores than both Group N and R (P ≤ 0.03, 0.001). The performance of Groups N and R was found to be equivalent; in self-assessing neuro-endoscopic skill, the participants in these groups were found to have equally low pretraining scores (4/10) with significant improvement shown after NET simulation (6, 7 respectively). Angled scopes resulted in decreased scores with tilted plates compared with straight plates (30° P ≤ 0.04, 45° P ≤ 0.001). With tilted plates, decreased scores were observed when we compared the 0° with 45° endoscope (right, P ≤ 0.008; left, P ≤ 0.002). The NET, a face and construct valid open-source partial task neuroendoscopic trainer, was designed. Presimulation novice neurosurgeons and neurosurgical residents were described as having insufficient skills and preparation to practice neuro-endoscopy. Plate tilt and endoscope angle were shown to be important factors in participant performance. The NET was found to be a useful partial-task trainer for skill building in neuro-endoscopy. Copyright © 2016 Elsevier Inc. All rights reserved.

Young organic matter as a source of carbon dioxide outgassing from Amazonian rivers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mayorga, E; Aufdenkampe, A K; Masiello, C A

2005-06-23

Rivers are generally supersaturated with respect to carbon dioxide, resulting in large gas evasion fluxes that can be a significant component of regional net carbon budgets. Amazonian rivers were recently shown to outgas more than ten times the amount of carbon exported to the ocean in the form of total organic carbon or dissolved inorganic carbon. High carbon dioxide concentrations in rivers originate largely from in situ respiration of organic carbon, but little agreement exists about the sources or turnover times of this carbon. Here we present results of an extensive survey of the carbon isotope composition ({sup 13}C andmore » {sup 14}C) of dissolved inorganic carbon and three size-fractions of organic carbon across the Amazonian river system. We find that respiration of contemporary organic matter (less than 5 years old) originating on land and near rivers is the dominant source of excess carbon dioxide that drives outgassing in mid-size to large rivers, although we find that bulk organic carbon fractions transported by these rivers range from tens to thousands of years in age. We therefore suggest that a small, rapidly cycling pool of organic carbon is responsible for the large carbon fluxes from land to water to atmosphere in the humid tropics.« less

A comparison of lead lengths for mini-fyke nets to sample age-0 gar species

USGS Publications Warehouse

Long, James M.; Snow, Richard A.; Patterson, Chas P.

2016-01-01

Mini-fyke nets are often used to sample small-bodied fishes in shallow (<1 m depth) water, especially in vegetated shoreline habitats where seines are ineffective. Recent interest in gar (Lepisosteidae) ecology and conservation led us to explore the use of mini-fyke nets to capture age-0 gar and specifically how capture is affected by lead length of the fyke net. In the summers of 2012, 2013, and 2015, mini-fyke nets with two different lead lengths (4.57 m and 9.14 m) were set at random sites in backwaters and coves of the Red River arm of Lake Texoma, Oklahoma. Mean CPUE (catch-per-unit-effort; number per net night) was significantly lower for mini-fyke nets with short leads (0.52) compared to those with long leads (1.51). Additionally, Spotted Gar (Lepisosteus oculatus) were captured at a higher rate than the other three gar species present in Lake Texoma, although this could have been an artifact of sampling location. We found that differences in length-frequency of captured gar between gear types were nearly significant, with total length ranging from 47mm to 590mm. Mini-fyke nets with longer leads increased the efficiency of sampling for age-0 gar by increasing catch rate without affecting estimates of other population parameters and appear to be useful for this purpose. 

Adaptive data-driven models for estimating carbon fluxes in the Northern Great Plains

USGS Publications Warehouse

Wylie, B.K.; Fosnight, E.A.; Gilmanov, T.G.; Frank, A.B.; Morgan, J.A.; Haferkamp, Marshall R.; Meyers, T.P.

2007-01-01

Rangeland carbon fluxes are highly variable in both space and time. Given the expansive areas of rangelands, how rangelands respond to climatic variation, management, and soil potential is important to understanding carbon dynamics. Rangeland carbon fluxes associated with Net Ecosystem Exchange (NEE) were measured from multiple year data sets at five flux tower locations in the Northern Great Plains. These flux tower measurements were combined with 1-km2 spatial data sets of Photosynthetically Active Radiation (PAR), Normalized Difference Vegetation Index (NDVI), temperature, precipitation, seasonal NDVI metrics, and soil characteristics. Flux tower measurements were used to train and select variables for a rule-based piece-wise regression model. The accuracy and stability of the model were assessed through random cross-validation and cross-validation by site and year. Estimates of NEE were produced for each 10-day period during each growing season from 1998 to 2001. Growing season carbon flux estimates were combined with winter flux estimates to derive and map annual estimates of NEE. The rule-based piece-wise regression model is a dynamic, adaptive model that captures the relationships of the spatial data to NEE as conditions evolve throughout the growing season. The carbon dynamics in the Northern Great Plains proved to be in near equilibrium, serving as a small carbon sink in 1999 and as a small carbon source in 1998, 2000, and 2001. Patterns of carbon sinks and sources are very complex, with the carbon dynamics tilting toward sources in the drier west and toward sinks in the east and near the mountains in the extreme west. Significant local variability exists, which initial investigations suggest are likely related to local climate variability, soil properties, and management.

A compact electron cyclotron resonance proton source for the Paul Scherrer Institute's proton accelerator facility

DOE Office of Scientific and Technical Information (OSTI.GOV)

Baumgarten, C.; Barchetti, A.; Einenkel, H.

2011-05-15

A compact electron cyclotron resonance proton source has been developed and installed recently at thePaul Scherrer Institute's high intensity proton accelerator. Operation at the ion source test stand and the accelerator demonstrates a high reliability and stability of the new source. When operated at a 10 - 12 mA net proton current the lifetime of the source exceeds 2000 h. The essential development steps towards the observed performance are described.

Army Net Zero Prove Out. Net Zero Energy Best Practices

DTIC Science & Technology

2014-11-18

energy which is then used to drive a heat engine to generate electrical power. Geothermal Power – These systems use thermal energy generated and...stored in the earth as a generating source for electricity. Several pilot installations are investigating this technology by conducting geothermal ...concentrate solar thermal energy which is then used to drive a heat engine to generate electrical power. • Geothermal Power - These systems use thermal energy

An Extensible NetLogo Model for Visualizing Message Routing Protocols

DTIC Science & Technology

2017-08-01

the hard sciences to the social sciences to computer-generated art. NetLogo represents the world as a set of...describe the model is shown here; for the supporting methods , refer to the source code. Approved for public release; distribution is unlimited. 4 iv...if ticks - last-inject > time-to-inject [inject] if run# > #runs [stop] end Next, we present some basic statistics collected for the

The Virtual Collaboration Environment: New Media for Crisis Response

DTIC Science & Technology

2011-05-01

openvce.net/forum-alternative-platforms and http://openvce.net/more), the open-source Drupal ®-based Proceedings of the 8th International ISCRAM... Drupal is a widely used modular content management system, with an active development community of its own. It provides a user management system and...authoring text documents (a facility felt to be lacking at the time in Drupal ). This wiki feature has itself been supplemented with experimental

Recent change of artic tundra ecosystems from a net carbon dioxide sink to a source

Treesearch

Walter C. Oechel; Steven J. Hastings; George Vourlitis; Mitchell Jenkins; George Riechers; Nancy Grulke

1993-01-01

Arctic tundra has been a net sink for carbon dioxide during historic and recent geological times1-4, and large amounts of carbon are stored in the soils of northern ecosystems. Many regions of the Arctic are warmer now than they have been in the past5-10, and this warming may cause the soil to change from a carbon dioxide...

The impact of water management practices and associated methane emissions on subtropical pasture greenhouse gas budgets and ecosystem service payments

NASA Astrophysics Data System (ADS)

Chamberlain, S.; Groffman, P. M.; Boughton, E.; Gomez-Casanovas, N.; DeLucia, E. H.; Bernacchi, C.; Sparks, J. P.

2016-12-01

Pastures are an extensive land cover type, however patterns in pasture greenhouse gas (GHG) exchange vary widely depending on climate and land management. Understanding this variation is important, as pastures may be a net GHG source or sink depending on these factors. We quantified carbon dioxide (CO2) and methane (CH4) fluxes from subtropical pastures in south Florida for three years using eddy covariance, and estimated annual budgets of CO2, CH4, and GHG equivalent emissions. We also explored the influence of water retention practices on pasture GHG budgets by combining data from a multi-year pasture water retention experiment with CH4 flux data from our eddy covariance tower to 1) estimate the influence of water retention on surface soil flooding, and 2) estimate the influence of extended surface soil flooding on CH4 emissions. These findings were then used to assess the impact of CH4 emissions on stakeholder payments for water retention services in a carbon market framework. The pastures were net CO2 sinks sequestering up to 163 ± 54 g CO2-C m-2 yr-1, but were also strong CH4 sources emitting up to 23.5 ± 2.1 g CH4-C m-2 yr-1. Accounting for the global warming potential of CH4, the pastures were strong GHG sources emitting up to 584 ± 78 g CO2 eq. m-2 yr-1. Our analysis suggests CH4 emissions due to increased flooding from water management practices is a small component of the pasture GHG budget, and water retention likely contributes 2-11% of pasture GHG emissions. These emissions could reduce water retention payments by up to 12% if stakeholders were required to pay for current GHG emissions in a carbon market. It would require at least 93.7 kg CH4-C emissions per acre-foot water storage for carbon market costs to exceed water retention payments, and this scenario is highly unlikely as we estimate current practices are responsible for 11.3 ± 7.2 kg CH4-C emissions per acre-foot of water storage. Our results demonstrate that water retention practices aimed at reducing nutrient loading to the Everglades are likely responsible for only a minor increase in pasture GHG emissions and would have a small economic consequence in a carbon market.

Construct Validity of Accelerometry-Derived Force to Quantify Basketball Movement Patterns.

PubMed

Staunton, Craig; Wundersitz, Daniel; Gordon, Brett; Kingsley, Michael

2017-12-01

This study assessed the construct validity of accelerometry-derived net force to quantify the external demands of basketball movements. Twenty-eight basketballers completed the Yo-Yo intermittent recovery test (Yo-Yo-IR1) and basketball exercise simulation test (BEST). Intensity was quantified using accelerometry-derived average net force (AvF Net ) and PlayerLoad TM per minute (PL/min). Within-player correlations were determined between intensity and running speed during Yo-Yo-IR1. Measured AvF Net was determined for movements during the BEST and predicted AvF Net was calculated using movement speed and correlations from Yo-Yo-IR1. Relationships between AvF Net and running speed during Yo-Yo-IR1 were nearly perfect (r 2 =0.95, 95% CI: 0.94-0.96; p<0.001) and stronger than correlations between running speed and PL/min (r 2 =0.80, 95% CI: 0.73-0.87; p<0.001). Differences between measured and predicted AvF Net were small during jogging and running (<1%), but large for basketball movements including jumping, change-of-direction and shuffling (15%-41%). As hypothesised, AvF Net differed by playing position (11%-16%; p <0.001) and reflected the additional demand upon players with larger body mass and lower movement efficiency. Both sprint speed and AvF Net reduced during the course of the BEST ( p ≤0.013). These findings confirm the construct validity of AvF Net to quantify the external demand of basketball movements. Accelerometry-derived net force has the potential to quantify the external demands of basketballers during training and competition. © Georg Thieme Verlag KG Stuttgart · New York.

26 CFR 1.737-3 - Basis adjustments; Recovery rules.

Code of Federal Regulations, 2012 CFR

2012-04-01

... Properties A1, A2, and A3 is long-term, U.S.-source capital gain or loss. The character of gain on Property A4 is long-term, foreign-source capital gain. B contributes Property B, nondepreciable real property...-term, foreign-source capital gain ($3,000 total gain under section 737 × $2,000 net long-term, foreign...

26 CFR 1.737-3 - Basis adjustments; Recovery rules.

Code of Federal Regulations, 2013 CFR

2013-04-01

... Properties A1, A2, and A3 is long-term, U.S.-source capital gain or loss. The character of gain on Property A4 is long-term, foreign-source capital gain. B contributes Property B, nondepreciable real property...-term, foreign-source capital gain ($3,000 total gain under section 737 × $2,000 net long-term, foreign...

26 CFR 1.737-3 - Basis adjustments; Recovery rules.

Code of Federal Regulations, 2011 CFR

2011-04-01

... Properties A1, A2, and A3 is long-term, U.S.-source capital gain or loss. The character of gain on Property A4 is long-term, foreign-source capital gain. B contributes Property B, nondepreciable real property...-term, foreign-source capital gain ($3,000 total gain under section 737 × $2,000 net long-term, foreign...

26 CFR 1.737-3 - Basis adjustments; Recovery rules.

Code of Federal Regulations, 2014 CFR

2014-04-01

... Properties A1, A2, and A3 is long-term, U.S.-source capital gain or loss. The character of gain on Property A4 is long-term, foreign-source capital gain. B contributes Property B, nondepreciable real property...-term, foreign-source capital gain ($3,000 total gain under section 737 × $2,000 net long-term, foreign...

26 CFR 1.737-3 - Basis adjustments; Recovery rules.

Code of Federal Regulations, 2010 CFR

2010-04-01

... Properties A1, A2, and A3 is long-term, U.S.-source capital gain or loss. The character of gain on Property A4 is long-term, foreign-source capital gain. B contributes Property B, nondepreciable real property...-term, foreign-source capital gain ($3,000 total gain under section 737 × $2,000 net long-term, foreign...

26 CFR 1.904(b)-1 - Special rules for capital gains and losses.

Code of Federal Regulations, 2011 CFR

2011-04-01

... in the passive category, and a $2,000 capital loss from sources within the United States. A's capital... sources outside the United States in the passive category by $2,000 ($3,000 of capital gain net income... adjustment, A has $4,000 of capital gain from sources outside the United States in the passive category and...

26 CFR 1.904(b)-1 - Special rules for capital gains and losses.

Code of Federal Regulations, 2010 CFR

2010-04-01

... in the passive category, and a $2,000 capital loss from sources within the United States. A's capital... sources outside the United States in the passive category by $2,000 ($3,000 of capital gain net income... adjustment, A has $4,000 of capital gain from sources outside the United States in the passive category and...

Life cycle analysis of switchgrass converted via pyrolysis, gasification, and fermentation

USDA-ARS?s Scientific Manuscript database

The US is promoting and developing low carbon fuel sources. Perennial bioenergy crops such as switchgrass (Panicum virgatum L.) are one viable source for low carbon transportation fuels. The objective is to determine the net greenhouse gas (GHG) emissions from different conversion methods (pyrolysi...

Carbon dioxide flux and net primary production of a boreal treed bog: Responses to warming and water-table-lowering simulations of climate change

NASA Astrophysics Data System (ADS)

Munir, T. M.; Perkins, M.; Kaing, E.; Strack, M.

2015-02-01

Midlatitude treed bogs represent significant carbon (C) stocks and are highly sensitive to global climate change. In a dry continental treed bog, we compared three sites: control, recent (1-3 years; experimental) and older drained (10-13 years), with water levels at 38, 74 and 120 cm below the surface, respectively. At each site we measured carbon dioxide (CO2) fluxes and estimated tree root respiration (Rr; across hummock-hollow microtopography of the forest floor) and net primary production (NPP) of trees during the growing seasons (May to October) of 2011-2013. The CO2-C balance was calculated by adding the net CO2 exchange of the forest floor (NEff-Rr) to the NPP of the trees. From cooler and wetter 2011 to the driest and the warmest 2013, the control site was a CO2-C sink of 92, 70 and 76 g m-2, the experimental site was a CO2-C source of 14, 57 and 135 g m-2, and the drained site was a progressively smaller source of 26, 23 and 13 g CO2-C m-2. The short-term drainage at the experimental site resulted in small changes in vegetation coverage and large net CO2 emissions at the microforms. In contrast, the longer-term drainage and deeper water level at the drained site resulted in the replacement of mosses with vascular plants (shrubs) on the hummocks and lichen in the hollows leading to the highest CO2 uptake at the drained hummocks and significant losses in the hollows. The tree NPP (including above- and below-ground growth and litter fall) in 2011 and 2012 was significantly higher at the drained site (92 and 83 g C m-2) than at the experimental (58 and 55 g C m-2) and control (52 and 46 g C m-2) sites. We also quantified the impact of climatic warming at all water table treatments by equipping additional plots with open-top chambers (OTCs) that caused a passive warming on average of ~ 1 °C and differential air warming of ~ 6 °C at midday full sun over the study years. Warming significantly enhanced shrub growth and the CO2 sink function of the drained hummocks (exceeding the cumulative respiration losses in hollows induced by the lowered water level × warming). There was an interaction of water level with warming across hummocks that resulted in the largest net CO2 uptake at the warmed drained hummocks. Thus in 2013, the warming treatment enhanced the sink function of the control site by 13 g m-2, reduced the source function of the experimental by 10 g m-2 and significantly enhanced the sink function of the drained site by 73 g m-2. Therefore, drying and warming in continental bogs is expected to initially accelerate CO2-C losses via ecosystem respiration, but persistent drought and warming is expected to restore the peatland's original CO2-C sink function as a result of the shifts in vegetation composition and productivity between the microforms and increased NPP of trees over time.

Mercury evasion from a boreal peatland shortens the timeline for recovery from legacy pollution.

PubMed

Osterwalder, Stefan; Bishop, Kevin; Alewell, Christine; Fritsche, Johannes; Laudon, Hjalmar; Åkerblom, Staffan; Nilsson, Mats B

2017-11-22

Peatlands are a major source of methylmercury that contaminates downstream aquatic food webs. The large store of mercury (Hg) in peatlands could be a source of Hg for over a century even if deposition is dramatically reduced. However, the reliability of Hg mass balances can be questioned due to missing long-term land-atmosphere flux measurements. We used a novel micrometeorological system for continuous measurement of Hg peatland-atmosphere exchange to derive the first annual Hg budget for a peatland. The evasion of Hg (9.4 µg m -2 yr -1 ) over the course of a year was seven times greater than stream Hg export, and over two times greater than wet bulk deposition to the boreal peatland. Measurements of dissolved gaseous Hg in the peat pore water also indicate Hg evasion. The net efflux may result from recent declines in atmospheric Hg concentrations that have turned the peatland from a net sink into a source of atmospheric Hg. This net Hg loss suggests that open boreal peatlands and downstream ecosystems can recover more rapidly from past atmospheric Hg deposition than previously assumed. This has important implications for future levels of methylmercury in boreal freshwater fish and the estimation of historical Hg accumulation rates from peat profiles.

Black–White Disparities in Criminal Justice Referrals to Drug Treatment: Addressing Treatment Need or Expanding the Diagnostic Net?

PubMed Central

McElrath, Karen; Taylor, Angela; Tran, Kimberly K.

2016-01-01

Slightly more than half of admissions to U.S. publicly-funded treatment for marijuana use are referred by the criminal justice system; this pattern has remained for at least 20 years. Nationally, Blacks comprise nearly a third of treatment admissions for marijuana use. This article explores the interplay between race and criminal justice referrals to treatment for marijuana use. Using data from the (U.S.) 2011 Treatment Episode Data Set, we examine the relationship between race and diagnosis of cannabis use disorder (dependence versus abuse) among referrals to community-based treatment in North Carolina. We compare Black/White differences in cannabis diagnoses across four referral sources: the criminal justice system, healthcare providers, self, and other sources. Race was significantly related to type of diagnosis across all four referral sources, however, the nature of the relationship was distinctly different among criminal justice referrals with Whites being more likely than Blacks to be diagnosed with cannabis dependence. Moreover, the marijuana use profiles of criminal justice referrals differed substantially from individuals referred by other sources. The findings suggest that diagnoses of cannabis abuse (rather than dependence) may have worked to widen the diagnostic net by “capturing” individuals under control of the criminal justice system who manifested few problems with marijuana use, other than their involvement in the criminal justice system. The potential for a net-widening effect appeared to be most pronounced for Blacks. PMID:27706092

A net-shaped multicellular formation facilitates the maturation of hPSC-derived cardiomyocytes through mechanical and electrophysiological stimuli

PubMed Central

Liu, Taoyan; Huang, Chengwu; Li, Hongxia; Wu, Fujian; Luo, Jianwen; Lu, Wenjing

2018-01-01

The use of human-induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) is limited in drug discovery and cardiac disease mechanism studies due to cell immaturity. Although many approaches have been reported to improve the maturation of hiPSC-CMs, the elucidation of the process of maturation is crucial. We applied a small-molecule-based differentiation method to generate cardiomyocytes (CMs) with multiple aggregation forms. The motion analysis revealed significant physical differences in the differently shaped CMs, and the net-shaped CMs had larger motion amplitudes and faster velocities than the sheet-shaped CMs. The net-shaped CMs displayed accelerated maturation at the transcriptional level and were more similar to CMs with a prolonged culture time (30 days) than to sheet-d15. Ion channel genes and gap junction proteins were up-regulated in net-shaped CMs, indicating that robust contraction was coupled with enhanced ion channel and connexin expression. The net-shaped CMs also displayed improved myofibril ultrastructure under transmission electron microscopy. In conclusion, different multicellular hPSC-CM structures, such as the net-shaped pattern, are formed using the conditioned induction method, providing a useful tool to improve cardiac maturation. PMID:29661985

Predictive factors of response to mTOR inhibitors in neuroendocrine tumours.

PubMed

Zatelli, Maria Chiara; Fanciulli, Giuseppe; Malandrino, Pasqualino; Ramundo, Valeria; Faggiano, Antongiulio; Colao, Annamaria

2016-03-01

Medical treatment of neuroendocrine tumours (NETs) has drawn a lot of attention due to the recent demonstration of efficacy of several drugs on progression-free survival, including somatostatin analogs, small tyrosine kinase inhibitors and mTOR inhibitors (or rapalogs). The latter are approved as therapeutic agents in advanced pancreatic NETs and have been demonstrated to be effective in different types of NETs, with variable efficacy due to the development of resistance to treatment. Early detection of patients that may benefit from rapalogs treatment is of paramount importance in order to select the better treatment and avoid ineffective and expensive treatments. Predictive markers for therapeutic response are under intensive investigation, aiming at a tailored patient management and more appropriate resource utilization. This review summarizes the available data on the tissue, circulating and imaging markers that are potentially predictive of rapalog efficacy in NETs. © 2016 Society for Endocrinology.

Mesh-size effects on drift sample composition as determined with a triple net sampler

USGS Publications Warehouse

Slack, K.V.; Tilley, L.J.; Kennelly, S.S.

1991-01-01

Nested nets of three different mesh apertures were used to study mesh-size effects on drift collected in a small mountain stream. The innermost, middle, and outermost nets had, respectively, 425 ??m, 209 ??m and 106 ??m openings, a design that reduced clogging while partitioning collections into three size groups. The open area of mesh in each net, from largest to smallest mesh opening, was 3.7, 5.7 and 8.0 times the area of the net mouth. Volumes of filtered water were determined with a flowmeter. The results are expressed as (1) drift retained by each net, (2) drift that would have been collected by a single net of given mesh size, and (3) the percentage of total drift (the sum of the catches from all three nets) that passed through the 425 ??m and 209 ??m nets. During a two day period in August 1986, Chironomidae larvae were dominant numerically in all 209 ??m and 106 ??m samples and midday 425 ??m samples. Large drifters (Ephemerellidae) occurred only in 425 ??m or 209 ??m nets, but the general pattern was an increase in abundance and number of taxa with decreasing mesh size. Relatively more individuals occurred in the larger mesh nets at night than during the day. The two larger mesh sizes retained 70% of the total sediment/detritus in the drift collections, and this decreased the rate of clogging of the 106 ??m net. If an objective of a sampling program is to compare drift density or drift rate between areas or sampling dates, the same mesh size should be used for all sample collection and processing. The mesh aperture used for drift collection should retain all species and life stages of significance in a study. The nested net design enables an investigator to test the adequacy of drift samples. ?? 1991 Kluwer Academic Publishers.

Net Zero Energy Military Installations: A Guide to Assessment and Planning

DOE Office of Scientific and Technical Information (OSTI.GOV)

Booth, S.; Barnett, J.; Burman, K.

2010-08-01

The U.S. Department of Defense (DoD) recognizes the strategic importance of energy to its mission, and is working to reduce energy consumption and enhance energy self-sufficiency by drawing on local clean energy sources. A joint initiative formed between DoD and the U.S. Department of Energy (DOE) in 2008 to address military energy use led to a task force to examine the potential for net zero energy military installations, which would produce as much energy on site as they consume in buildings, facilities, and fleet vehicles. This report presents an assessment and planning process to examine military installations for net zeromore » energy potential. Net Zero Energy Installation Assessment (NZEIA) presents a systematic framework to analyze energy projects at installations while balancing other site priorities such as mission, cost, and security.« less

Enriching semantic knowledge bases for opinion mining in big data applications.

PubMed

Weichselbraun, A; Gindl, S; Scharl, A

2014-10-01

This paper presents a novel method for contextualizing and enriching large semantic knowledge bases for opinion mining with a focus on Web intelligence platforms and other high-throughput big data applications. The method is not only applicable to traditional sentiment lexicons, but also to more comprehensive, multi-dimensional affective resources such as SenticNet. It comprises the following steps: (i) identify ambiguous sentiment terms, (ii) provide context information extracted from a domain-specific training corpus, and (iii) ground this contextual information to structured background knowledge sources such as ConceptNet and WordNet. A quantitative evaluation shows a significant improvement when using an enriched version of SenticNet for polarity classification. Crowdsourced gold standard data in conjunction with a qualitative evaluation sheds light on the strengths and weaknesses of the concept grounding, and on the quality of the enrichment process.

Dissolved organic carbon export and its contribution to the carbon budget in a boreal peat landscape undergoing rapid permafrost thaw

NASA Astrophysics Data System (ADS)

Sonnentag, O.; Fouche, J.; Helbig, M.; Karoline, W.; Hould Gosselin, G.; Hanisch, J.; Quinton, W. L.; Moore, T. R.

2017-12-01

Northern permafrost soils store 1035 ± 150 Pg of organic carbon in the first 3 m. In boreal lowlands with warm and thin isolated, sporadic and discontinuous permafrost, increasing temperatures cause a thaw-induced expansion of permafrost-free wetlands at the expense of forested permafrost peat plateaus. Permafrost thaw associated with warmer soils may enhance microbial decomposition of near-surface and deeper organic matter but also increase dissolved organic carbon (DOC) export to aquatic systems. Recent studies suggest that, under a warmer climate, the current net CO2 sink strength of boreal peat landscapes may decline over the next few decades, eventually turning them into net CO2 sources. DOC export from these organic-rich landscapes undergoing rapid permafrost thaw may play a non-negligible role for the carbon budget in a warmer climate. In this study, we quantify the DOC export from a boreal peat landscape in the southern Northwest Territories (Canada). We use half-hourly discharge measurements and DOC concentrations sampled at the outlets of three small catchments ( 0.1 km2) to quantify runoff and DOC export from April to August 2014, 2015 and 2016. We estimate the DOC export contribution to the overall carbon budget using concurrent eddy covariance measurements of net CO2 and methane exchanges. The primary control of DOC export is discharge. In 2016, 70% of the DOC was exported during the two weeks of the spring freshet in early May. DOC export from the three catchments was 3g C m-2 from April to August, which accounted for 15% of the annual net ecosystem exchange. For the same period, the cumulative methane emissions were 6 g C-CH4 m-2. Our findings suggest that thawing boreal peat landscapes along the southern limit of permafrost currently act as net carbon sinks with 11 g C m-2 y-1. Investigating the optical properties of the dissolved organic matter across the different landforms (e.g., transition between forested permafrost peat plateau and permafrost-free wetland) will allow us to assess the different contributions to catchment DOC export and better forecast the changes in DOC lability with permafrost thaw and wetland expansion. Associated with a more rainfall-controlled runoff regime, changes in DOC export with warming may affect the carbon budget in the southern boundaries of the permafrost region.

The Condition of Farmworkers and Small Farmer in 1974. Report to the National Board of the National Sharecroppers Fund/Rural Advancement Fund.

ERIC Educational Resources Information Center

Pierce, James M.

The number of farms in rural America continued to decline. In 1974, 23,420 farms went out of business. Farm subsidy payments, originally designed to assist small farmers, contributed little to the survival of the small farmer. The 1974 increased costs in fuel and fertilizer alone reduced net farm income by $5 billion--approximately a $2,500…

Chromogranin A

MedlinePlus

... a variety of tumors, both benign and malignant . Examples include carcinoid tumors, insulinomas , small cell lung cancers, ... Detailed Guide Cancer.Net: Carcinoid Tumors Neuroendocrine Tumor Research Foundation The Carcinoid Cancer Foundation American Cancer Society: ...

Net carbon uptake by establishing biofuel crops in Central Illinois

USDA-ARS?s Scientific Manuscript database

Clean and renewable sources of energy as wind, solar or biofuels comprise a valuable set of options available to deal with the pressing topics of energy security and mitigation of climate change effects. However, the efficiency in energy conversion and the environmental impacts of each new source of...

FOREST HARVESTS AND WOOD PRODUCTS: SOURCES AND SINKS OF ATMOSPHERIC CARBON DIOXIDE

EPA Science Inventory

Changes in the net carbon(c)sink-source balance related to a country's forest harvesting and use of wood products is an important component in making country-level inventories of greenhouse gas emissions,a current activity within many signatory nations to the UN Framework Convent...

Winter photosynthesis of red spruce from three Vermont seed sources

Treesearch

P.G. Schaberg; R.C. Wilkinson; J.B. Shane; J.R. Donnelly; P.F. Cali

1995-01-01

We evaluated winter (January through March) carbon assimilation of red spruce (Picea rubens Sarg.) from three Vermont seed sources grown in a common garden in northwestern Vermont. Although CO2 exchange rates were generally low, net photosynthetic rates increased during two prolonged thaws. Significant correlations between CO...

A Population-Based Analysis of Application of WHO Nomenclature in Pathology Reports of Pulmonary Neuroendocrine Tumors.

PubMed

Derks, Jules L; van Suylen, Robert Jan; Thunnissen, Erik; den Bakker, Michael A; Smit, Egbert F; Groen, Harry J M; Speel, Ernst J M; Dingemans, Anne-Marie C

2016-04-01

Pulmonary neuroendocrine tumors (pNETs) are difficult to classify. We performed a population-based analysis to investigate the application of pNET nomenclature in daily pathology practice. Conclusions from pathology reports (2003-2012) describing carcinoids, (large cell) neuroendocrine carcinomas (NECs), and carcinomas with neuroendocrine features/differentiation were retrieved from the Dutch Pathology Registry by queries on location and diagnosis and screened for terminology. Cases with a nonpulmonary or unknown origin and small cell lung cancer were excluded. Diagnoses were clustered into subgroups and the retrieved terminology was compared with the 2015 World Health Organization (WHO) diagnoses. By means of an online questionnaire, interpretation of the non-WHO nomenclature retrieved from pathology reports was evaluated (by 35 physicians and 19 pathologists). A total of 3216 unique pathology report conclusions with 55 different pNET diagnoses (n = 3052) and 20 uncertain diagnoses (n = 164) were analyzed. Non-WHO nomenclature was used in 15% of diagnoses (n = 488). Diagnoses could be clustered into carcinoids (n = 1086), NEC (n = 1316), carcinomas with neuroendocrine features/differentiation (n = 624), and unspecified pNETs (n = 26). Non-WHO nomenclature within these clusters was found for 7% of carcinoids, 20% of NECs, 13% of carcinomas with neuroendocrine features/differentiation, and 100% of unspecified pNETs and was observed more often in conclusions regarding biopsy or cytological specimens (62% and 12%) compared with resection specimens (26%). Analysis of the questionnaire results revealed that 4 of 19 diagnoses based on non-WHO nomenclature were uniformly interpreted (>50% agreement) by physicians, as were 10 of 19 diagnoses by pathologists. In 15% of pNETs other than small cell lung cancer, a non-WHO nomenclature diagnosis was provided, more frequently on the basis of smaller specimens. The interpretation was different between physicians and pathologists. Application of uniform nomenclature among all clinicians is advocated. Copyright © 2016 International Association for the Study of Lung Cancer. Published by Elsevier Inc. All rights reserved.

Ontogeny of flow-stimulated potassium secretion in rabbit cortical collecting duct: functional and molecular aspects.

PubMed

Woda, Craig B; Miyawaki, Nobuyuki; Ramalakshmi, Santhanam; Ramkumar, Mohan; Rojas, Raul; Zavilowitz, Beth; Kleyman, Thomas R; Satlin, Lisa M

2003-10-01

High urinary flow rates stimulate K secretion in the fully differentiated but not neonatal or weanling rabbit cortical collecting duct (CCD). Both small-conductance secretory K and high-conductance Ca2+/stretch-activated maxi-K channels have been identified in the apical membrane of the mature CCD by patch-clamp analysis. We reported that flow-stimulated net K secretion in the adult rabbit CCD is 1) blocked by TEA and charybdotoxin, inhibitors of intermediate- and high-conductance (maxi-K) Ca2+-activated K channels, and 2) associated with increases in net Na absorption and intracellular Ca2+ concentration ([Ca2+]i). The present study examined whether the absence of flow-stimulated K secretion early in life is due to a 1) limited flow-induced rise in net Na absorption and/or [Ca2+]i and/or 2) paucity of apical maxi-K channels. An approximately sixfold increase in tubular fluid flow rate in CCDs isolated from 4-wk-old rabbits and microperfused in vitro led to an increase in net Na absorption and [Ca2+]i, similar in magnitude to the response observed in 6-wk-old tubules, but it failed to generate an increase in net K secretion. By 5 wk of age, there was a small, but significant, flow-stimulated rise in net K secretion that increased further by 6 wk of life. Luminal perfusion with iberiotoxin blocked the flow stimulation of net K secretion in the adult CCD, confirming the identity of the maxi-K channel in this response. Maxi-K channel alpha-subunit message was consistently detected in single CCDs from animals >/=4 wk of age by RT-PCR. Indirect immunofluorescence microscopy using antibodies directed against the alpha-subunit revealed apical labeling of intercalated cells in cryosections from animals >/=5 wk of age; principal cell labeling was generally intracellular and punctate. We speculate that the postnatal appearance of flow-dependent K secretion is determined by the transcriptional/translational regulation of expression of maxi-K channels. Furthermore, our studies suggest a novel function for intercalated cells in mediating flow-stimulated K secretion.

Localisation, Globalisation and SMEs in European Tourism: The "Virtual Enterprise" Model of Intervention.

ERIC Educational Resources Information Center

Davenport, Elisabeth

2000-01-01

Discussion of the effect of globalization on SMEs (small and medium enterprises) in Europe focuses on a case study of a current European Commission (EC) project, Net Quality, which is based on the virtual enterprise as an intervention model that may encourage small businesses to cooperate in strategic ventures. (Contains 29 references.)…

Globally sourced mineral commodities used in U.S. Navy SEAL gear—An illustration of U.S. net import reliance

USGS Publications Warehouse

Brainard, Jamie; Nassar, Nedal T.; Gambogi, Joseph; Baker, Michael S.; Jarvis, Michael T.

2018-01-25

A U.S. Navy SEAL (an acronym for sea, air, land) carries gear containing at least 23 nonfuel mineral commodities for which the United States is greater than 50 percent net import reliant. The graphics display the leading world producers of selected nonfuel mineral commodities used to manufacture U.S. Navy SEAL gear. SEALs are members of the U.S. Navy's special operations forces.

Measurement of Urban fluxes of CO2 and water

NASA Astrophysics Data System (ADS)

Grimmond, S.; Crawford, B.; Offerle, B.; Hom, J.

2006-05-01

Measurements of surface-atmosphere fluxes of carbon dioxide (FCO2) and latent heat in urban environments are rare even though cities are a major source of atmospheric CO2 and users of water. In this paper, an overview of urban FCO2 measurements will be presented to illustrate how and where such measurements are being conducted and emerging results to date. Most of these studies have been conducted over short periods of time; few studies have considered annual sources/sinks. More investigations have been conducted, and are planned, in European cities than elsewhere, most commonly in areas of medium density urban development. The most dense urban sites are significant net sources of carbon. However, in areas where there is large amounts of vegetation present, there is a net sink of carbon during the summertime. In the second part of the presentation, more detailed attention will be directed to an ongoing measurement program in Baltimore, MD (part of the Baltimore Ecosystem Study). Eddy covariance instrumentation mounted on a tall-tower at 41.2 m has continuously measured local-scale fluxes of carbon dioxide from a suburban environment since 2001. Several features make this particular study unique: 1) for an urban area, the study site is extensively vegetated, 2) the period of record (2001-2005) is among the longest available for urban FCO2 measurements, 3) both closed-path and open-path infrared gas analyzers are used for observations, and 4) several unique data quality control and gap-filling methods have been developed for use in an urban environment. Additionally, detailed surface datasets and GIS software are used to perform flux source area analysis. Results from Baltimore indicate that FCO2 is very dependent on source area land-cover characteristics, particularly the proportion of vegetated and built surfaces. Over the course of a year, the urban surface is a strong net source of CO2, though there is considerable inter-annual variability depending on environmental conditions (e.g. average temperature, total precipitation, cicada infestation). During the growing season, there is net uptake of CO2 by the surface, but this uptake is less than in forested areas and is not enough to offset CO2 emissions for the entire year

The Chandra Source Catalog: Spectral Properties

NASA Astrophysics Data System (ADS)

Doe, Stephen; Siemiginowska, Aneta L.; Refsdal, Brian L.; Evans, Ian N.; Anderson, Craig S.; Bonaventura, Nina R.; Chen, Judy C.; Davis, John E.; Evans, Janet D.; Fabbiano, Giuseppina; Galle, Elizabeth C.; Gibbs, Danny G., II; Glotfelty, Kenny J.; Grier, John D.; Hain, Roger; Hall, Diane M.; Harbo, Peter N.; He, Xiang Qun (Helen); Houck, John C.; Karovska, Margarita; Kashyap, Vinay L.; Lauer, Jennifer; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph B.; Mitschang, Arik W.; Morgan, Douglas L.; Mossman, Amy E.; Nichols, Joy S.; Nowak, Michael A.; Plummer, David A.; Primini, Francis A.; Rots, Arnold H.; Sundheim, Beth A.; Tibbetts, Michael S.; van Stone, David W.; Winkelman, Sherry L.; Zografou, Panagoula

2009-09-01

The first release of the Chandra Source Catalog (CSC) contains all sources identified from eight years' worth of publicly accessible observations. The vast majority of these sources have been observed with the ACIS detector and have spectral information in 0.5-7 keV energy range. Here we describe the methods used to automatically derive spectral properties for each source detected by the standard processing pipeline and included in the final CSC. Hardness ratios were calculated for each source between pairs of energy bands (soft, medium and hard) using the Bayesian algorithm (BEHR, Park et al. 2006). The sources with high signal to noise ratio (exceeding 150 net counts) were fit in Sherpa (the modeling and fitting application from the Chandra Interactive Analysis of Observations package, developed by the Chandra X-ray Center; see Freeman et al. 2001). Two models were fit to each source: an absorbed power law and a blackbody emission. The fitted parameter values for the power-law and blackbody models were included in the catalog with the calculated flux for each model. The CSC also provides the source energy flux computed from the normalizations of predefined power-law and black-body models needed to match the observed net X-ray counts. In addition, we provide access to data products for each source: a file with source spectrum, the background spectrum, and the spectral response of the detector. This work is supported by NASA contract NAS8-03060 (CXC).

Accidental bait: do deceased fish increase freshwater turtle bycatch in commercial fyke nets?

PubMed

Larocque, Sarah M; Watson, Paige; Blouin-Demers, Gabriel; Cooke, Steven J

2012-07-01

Bycatch of turtles in passive inland fyke net fisheries has been poorly studied, yet bycatch is an important conservation issue given the decline in many freshwater turtle populations. Delayed maturity and low natural adult mortality make turtles particularly susceptible to population declines when faced with additional anthropogenic adult mortality such as bycatch. When turtles are captured in fyke nets, the prolonged submergence can lead to stress and subsequent drowning. Fish die within infrequently checked passive fishing nets and dead fish are a potential food source for many freshwater turtles. Dead fish could thus act as attractants and increase turtle captures in fishing nets. We investigated the attraction of turtles to decomposing fish within fyke nets in eastern Ontario. We set fyke nets with either 1 kg of one-day or five-day decomposed fish, or no decomposed fish in the cod-end of the net. Decomposing fish did not alter the capture rate of turtles or fish, nor did it alter the species composition of the catch. Thus, reducing fish mortality in nets using shorter soak times is unlikely to alter turtle bycatch rates since turtles were not attracted by the dead fish. Interestingly, turtle bycatch rates increased as water temperatures did. Water temperature also influences turtle mortality by affecting the duration turtles can remain submerged. We thus suggest that submerged nets to either not be set or have reduced soak times in warm water conditions (e.g., >20 °C) as turtles tend to be captured more frequently and cannot withstand prolonged submergence.

Comparisons of watershed sulfur budgets in southeast Canada and northeast US: New approaches and implications

USGS Publications Warehouse

Mitchell, M.J.; Lovett, G.; Bailey, S.; Beall, F.; Burns, D.; Buso, D.; Clair, T.A.; Courchesne, F.; Duchesne, L.; Eimers, C.; Fernandez, I.; Houle, D.; Jeffries, D.S.; Likens, G.E.; Moran, M.D.; Rogers, C.; Schwede, D.; Shanley, J.; Weathers, K.C.; Vet, R.

2011-01-01

Most of eastern North America receives elevated levels of atmospheric deposition of sulfur (S) that result from anthropogenic SO2 emissions from fossil fuel combustion. Atmospheric S deposition has acidified sensitive terrestrial and aquatic ecosystems in this region; however, deposition has been declining since the 1970s, resulting in some recovery in previously acidified aquatic ecosystems. Accurate watershed S mass balances help to evaluate the extent to which atmospheric S deposition is retained within ecosystems, and whether internal cycling sources and biogeochemical processes may be affecting the rate of recovery from decreasing S atmospheric loads. This study evaluated S mass balances for 15 sites with watersheds in southeastern Canada and northeastern US for the period 1985 to 2002. These 15 sites included nine in Canada (Turkey Lakes, ON; Harp Lake, ON; Plastic Lake, ON; Hermine, QC; Lake Laflamme, QC; Lake Clair, QC; Lake Tirasse, QC; Mersey, NS; Moosepit, NS) and six in the US (Arbutus Lake, NY; Biscuit Brook, NY; Sleepers River, VT; Hubbard Brook Experimental Forest, NH; Cone Pond, NH; Bear Brook Watershed, ME). Annual S wet deposition inputs were derived from measured bulk or wet-only deposition and stream export was obtained by combining drainage water fluxes with SO42- concentrations. Dry deposition has the greatest uncertainty of any of the mass flux calculations necessary to develop accurate watershed balances, and here we developed a new method to calculate this quantity. We utilized historical information from both the US National Emissions Inventory and the US (CASTNET) and the Canadian (CAPMoN) dry deposition networks to develop a formulation that predicted SO2 concentrations as a function of SO2 emissions, latitude and longitude. The SO2 concentrations were used to predict dry deposition using relationships between concentrations and deposition flux derived from the CASTNET or CAPMoN networks. For the year 2002, we compared the SO2 concentrations and deposition predictions with the predictions of two continental-scale air quality models, the Community Multiscale Air Quality (CMAQ) model and A Unified Regional Air-quality Modeling System (AURAMS) that utilize complete inventories of emissions and chemical budgets. The results of this comparison indicated that the predictive relationship provides an accurate representation of SO2 concentrations and S deposition for the region that is generally consistent with these models, and thus provides confidence that our approach could be used to develop accurate watershed S budgets for these 15 sites. Most watersheds showed large net losses of SO42- on an annual basis, and the watershed mass balances were grouped into five categories based on the relative value of mean annual net losses or net gains. The net annual fluxes of SO42- showed a strong relationship with hydrology; the largest net annual negative fluxes were associated with years of greatest precipitation amount and highest discharge. The important role of catchment hydrology on S budgets suggests implications for future predicted climate change as it affects patterns of precipitation and drought. The sensitivity of S budgets is likely to be greatest in watersheds with the greatest wetland area, which are particularly sensitive to drying and wetting cycles. A small number of the watersheds in this analysis were shown to have substantial S sources from mineral weathering, but most showed evidence of an internal source of SO42-, which is likely from the mineralization of organic S stored from decades of increased S deposition. Mobilization of this internal S appears to contribute about 1-6 kg S ha-1 year-1 to stream fluxes at these sites and is affecting the rate and extent of recovery from acidification as S deposition rates have declined in recent years. This internal S source should be considered when developing critical deposition loads that will promote ecosystem recovery from acidification and the depl

Efficacy of using data from angler-caught Burbot to estimate population rate functions

USGS Publications Warehouse

Brauer, Tucker A.; Rhea, Darren T.; Walrath, John D.; Quist, Michael C.

2018-01-01

The effective management of a fish population depends on the collection of accurate demographic data from that population. Since demographic data are often expensive and difficult to obtain, developing cost‐effective and efficient collection methods is a high priority. This research evaluates the efficacy of using angler‐supplied data to monitor a nonnative population of Burbot Lota lota. Age and growth estimates were compared between Burbot collected by anglers and those collected in trammel nets from two Wyoming reservoirs. Collection methods produced different length‐frequency distributions, but no difference was observed in age‐frequency distributions. Mean back‐calculated lengths at age revealed that netted Burbot grew faster than angled Burbot in Fontenelle Reservoir. In contrast, angled Burbot grew slightly faster than netted Burbot in Flaming Gorge Reservoir. Von Bertalanffy growth models differed between collection methods, but differences in parameter estimates were minor. Estimates of total annual mortality (A) of Burbot in Fontenelle Reservoir were comparable between angled (A = 35.4%) and netted fish (33.9%); similar results were observed in Flaming Gorge Reservoir for angled (29.3%) and netted fish (30.5%). Beverton–Holt yield‐per‐recruit models were fit using data from both collection methods. Estimated yield differed by less than 15% between data sources and reservoir. Spawning potential ratios indicated that an exploitation rate of 20% would be required to induce recruitment overfishing in either reservoir, regardless of data source. Results of this study suggest that angler‐supplied data are useful for monitoring Burbot population dynamics in Wyoming and may be an option to efficiently monitor other fish populations in North America.

Productivity and carbon dioxide exchange of leguminous crops: estimates from flux tower measurements

USGS Publications Warehouse

Gilmanov, Tagir G.; Baker, John M.; Bernacchi, Carl J.; Billesbach, David P.; Burba, George G.; Castro, Saulo; Chen, Jiquan; Eugster, Werner; Fischer, Marc L.; Gamon, John A.; Gebremedhin, Maheteme T.; Glenn, Aaron J.; Griffis, Timothy J.; Hatfield, Jerry L.; Heuer, Mark W.; Howard, Daniel M.; Leclerc, Monique Y.; Loescher, Henry W.; Marloie, Oliver; Meyers, Tilden P.; Olioso, Albert; Phillips, Rebecca L.; Prueger, John H.; Skinner, R. Howard; Suyker, Andrew E.; Tenuta, Mario; Wylie, Bruce K.

2014-01-01

Net CO2 exchange data of legume crops at 17 flux tower sites in North America and three sites in Europe representing 29 site-years of measurements were partitioned into gross photosynthesis and ecosystem respiration by using the nonrectangular hyperbolic light-response function method. The analyses produced net CO2 exchange data and new ecosystem-scale ecophysiological parameter estimates for legume crops determined at diurnal and weekly time steps. Dynamics and annual totals of gross photosynthesis, ecosystem respiration, and net ecosystem production were calculated by gap filling with multivariate nonlinear regression. Comparison with the data from grain crops obtained with the same method demonstrated that CO2 exchange rates and ecophysiological parameters of legumes were lower than those of maize (Zea mays L.) but higher than for wheat (Triticum aestivum L.) crops. Year-round annual legume crops demonstrated a broad range of net ecosystem production, from sinks of 760 g CO2 m–2 yr–1 to sources of –2100 g CO2 m–2 yr–1, with an average of –330 g CO2 m–2 yr–1, indicating overall moderate CO2–source activity related to a shorter period of photosynthetic uptake and metabolic costs of N2 fixation. Perennial legumes (alfalfa, Medicago sativa L.) were strong sinks for atmospheric CO2, with an average net ecosystem production of 980 (range 550–1200) g CO2 m–2 yr–1.

Smoking, alcohol and family history of cancer as risk factors for small intestinal neuroendocrine tumors: a systematic review and meta-analysis.

PubMed

Haugvik, Sven-Petter; Basim Ibrahim, Ibrahim; Hedenström, Per; Valente, Roberto; Hayes, Alastair J; Siuka, Darko; Gladhaug, Ivar Prydz; Capurso, Gabriele

2017-08-01

Risk factors for small intestinal neuroendocrine tumors (SI-NETs) are not well understood. The aim of this systematic literature review was to identify risk factors for SI-NET and to further assess these by meta-analysis. PubMed and abstracts from the ENETS and NANETS were searched for studies published until May 2015. Eligible studies were selected according to the PRISMA statement. Seven studies evaluating six individual populations were included (study accrual period 1980-2012) in the meta-analysis, involving 765 (range 17-325) cases and 502,282 (range 52-498,376) controls. All studies were case-control by design. The following risk factors were reported in ≥2 studies: family history of any cancer, family history of colorectal cancer, ever alcohol use and ever smoking. The pooled OR was 1.34 (95% CI: 1.12-1.60; p < .01; I 2  = 0.0%) for family history of any cancer, 1.43 (95% CI: 1.15-1.79; p < .01; I 2  = 0.0%) for family history of colorectal cancer, 1.04 (95% CI: 0.63-1.72; p = .87; I 2  = 65.0%) for ever alcohol use and 1.40 (95% CI: 1.06-1.86; p < .05; I 2  = 49.3%) for ever smoking. Family history of any cancer, family history of colorectal cancer and history of ever smoking were associated with an increased risk of SI-NET by meta-analysis. Alcohol consumption was not a significant risk factor for SI-NET. However, the studies reporting smoking and alcohol had a high degree of heterogeneity. Therefore, further studies are needed for clarification of smoking and alcohol as risk factors for the occurrence of SI-NET.

Capture of planetesimals into a circumterrestrial swarm

NASA Technical Reports Server (NTRS)

Weidenschilling, S. J.

1984-01-01

The lunar origin model considered involves processing of protolunar material through a circumterrestrial swarm of particles. Once such a swarm has formed, it can gain mass by capturing infalling planetesimals and ejecta from giant impacts on the Earth, although the angular momentum supply from these sources remains a problem. Examined is the first stage of formation of a geocentric swarm by capture of planetesimals from initialy heliocentric orbits. The only plausible capture mechanism that is not dependent on very low approach velocities is the mutual collision of planetesimals passing within Earth's sphere of influence. This capture scenario was tested directly by many body numerical integration of planetesimal orbits in near Earth space. Results agree that the systematic contribution of angular momentum is insufficient to maintain an orbiting swarm under heavy bombardment. Thus, a circumterrestrial swarm can be formed rather easily, but is hard to sustain because the mean net angular momentum of a many body swarm is small.

Complete genome sequence of “Enterobacter lignolyticus” SCF1

DOE Office of Scientific and Technical Information (OSTI.GOV)

DeAngelis, Kristen M.; D'Haeseleer, Patrik; Chivian, Dylan

2011-09-23

In an effort to discover anaerobic bacteria capable of lignin degradation, we isolated 'Ente-robacter lignolyticus' SCF1 on minimal media with alkali lignin as the sole source of carbon. This organism was isolated anaerobically from tropical forest soils collected from the Short Cloud Forest site in the El Yunque National Forest in Puerto Rico, USA, part of the Luquillo Long-Term Ecological Research Station. At this site, the soils experience strong fluctuations in redox potential and are net methane producers. Because of its ability to grow on lignin anae-robically, we sequenced the genome. The genome of 'E. lignolyticus' SCF1 is 4.81 Mbpmore » with no detected plasmids, and includes a relatively small arsenal of lignocellulolytic carbohy-drate active enzymes. Lignin degradation was observed in culture, and the genome revealed two putative laccases, a putative peroxidase, and a complete 4-hydroxyphenylacetate degra-dation pathway encoded in a single gene cluster.« less

Radiative properties of ceramic metal-halide high intensity discharge lamps containing additives in argon plasma

NASA Astrophysics Data System (ADS)

Cressault, Yann; Teulet, Philippe; Zissis, Georges

2016-07-01

The lighting represents a consumption of about 19% of the world electricity production. We are thus searching new effective and environment-friendlier light sources. The ceramic metal-halide high intensity lamps (C-MHL) are one of the options for illuminating very high area. The new C-MHL lamps contain additives species that reduce mercury inside and lead to a richer spectrum in specific spectral intervals, a better colour temperature or colour rendering index. This work is particularly focused on the power radiated by these lamps, estimated using the net emission coefficient, and depending on several additives (calcium, sodium, tungsten, dysprosium, and thallium or strontium iodides). The results show the strong influence of the additives on the power radiated despite of their small quantity in the mixtures and the increase of visible radiation portion in presence of dysprosium.

Establishment of a national database to link epidemiological and molecular data from norovirus outbreaks in Ireland.

PubMed

Kelly, S; Foley, B; Dunford, L; Coughlan, S; Tuite, G; Duffy, M; Mitchell, S; Smyth, B; O'Neill, H; McKeown, P; Hall, W; Lynch, M

2008-11-01

A prospective study of norovirus outbreaks in Ireland was carried out over a 1-year period from 1 October 2004 to 30 September 2005. Epidemiological and molecular data on norovirus outbreaks in the Republic of Ireland (ROI) and Northern Ireland (NI) were collected and combined in real time in a common database. Most reported outbreaks occurred in hospitals and residential institutions and person-to-person spread was the predominant mode of transmission. The predominant circulating norovirus strain was the GII.4-2004 strain with a small number of outbreaks due to GII.2. This study represents the first time that enhanced epidemiological and virological data on norovirus outbreaks in Ireland have been described. The link established between the epidemiological and virological institutions during the course of this study has been continued and the data is being used as a source of data for the Foodborne Viruses in Europe Network (DIVINE-NET).

Wealth, mother's education and physical access as determinants of retail sector net use in rural Kenya

PubMed Central

2006-01-01

Background Insecticide-treated bed nets (ITN) provide real hope for the reduction of the malaria burden across Africa. Understanding factors that determine access to ITN is crucial to debates surrounding the optimal delivery systems. The influence of homestead wealth on use of nets purchased from the retail sector is well documented, however, the competing influence of mother's education and physical access to net providers is less well understood. Methods Between December 2004 and January 2005, a random sample of 72 rural communities was selected across four Kenyan districts. Demographic, assets, education and net use data were collected at homestead, mother and child (aged < 5 years) levels. An assets-based wealth index was developed using principal components analysis, travel time to net sources was modelled using geographic information systems, and factors influencing the use of retail sector nets explored using a multivariable logistic regression model. Results Homestead heads and guardians of 3,755 children < 5 years of age were interviewed. Approximately 15% (562) of children slept under a net the night before the interview; 58% (327) of the nets used were purchased from the retail sector. Homestead wealth (adjusted OR = 10.17, 95% CI = 5.45–18.98), travel time to nearest market centres (adjusted OR = 0.51, 95% CI = 0.37–0.72) and mother's education (adjusted OR = 2.92, 95% CI = 1.93–4.41) were significantly associated with use of retail sector nets by children aged less than 5 years. Conclusion Approaches to promoting access to nets through the retail sector disadvantage poor and remote communities where mothers are less well educated. PMID:16436216

The Resilience of the Health Care Safety Net, 1996–2001

PubMed Central

Felland, Laurie E; Lesser, Cara S; Staiti, Andrea Benoit; Katz, Aaron; Lichiello, Patricia

2003-01-01

Objective To determine how the capacity and viability of local health care safety nets changed over the last six years and to draw lessons from these changes. Data Source The first three rounds (May 1996 to March 2001) of Community Tracking Study site visits to 12 communities. Study Design Researchers visited the study communities every two years to interview leaders of local health care systems about changes in the organization, delivery, and financing of health care and the impact of these changes on people. For this analysis, we collected data on safety net capacity and viability through interviews with public and not-for-profit hospitals, community health centers, health departments, government officials, consumer advocates, academics, and others. We asked about the effects of market and policy changes on the safety net and how the safety net responded, as well as the impact of these changes on care for the low-income uninsured. Principal Findings The safety net in three-quarters of the communities was stable or improved by the end of the study period, leading to improved access to primary and preventive care for the low-income uninsured. Policy responses to pressures such as the Balanced Budget Act and Medicaid managed care, along with effective safety net strategies and supportive conditions, helped reinforce the safety net. However, the safety net in three sites deteriorated and access to specialty services remained inadequate across the 12 sites. Conclusions Despite pessimistic predictions and some notable exceptions, the health care safety net grew stronger over the past six years. Given considerable community variation, however, this analysis indicates that policymakers can apply a number of lessons from strong and improving safety nets to strengthen those that are weaker, particularly as the current economy poses new challenges. PMID:12650377

GFD-Net: A novel semantic similarity methodology for the analysis of gene networks.

PubMed

Díaz-Montaña, Juan J; Díaz-Díaz, Norberto; Gómez-Vela, Francisco

2017-04-01

Since the popularization of biological network inference methods, it has become crucial to create methods to validate the resulting models. Here we present GFD-Net, the first methodology that applies the concept of semantic similarity to gene network analysis. GFD-Net combines the concept of semantic similarity with the use of gene network topology to analyze the functional dissimilarity of gene networks based on Gene Ontology (GO). The main innovation of GFD-Net lies in the way that semantic similarity is used to analyze gene networks taking into account the network topology. GFD-Net selects a functionality for each gene (specified by a GO term), weights each edge according to the dissimilarity between the nodes at its ends and calculates a quantitative measure of the network functional dissimilarity, i.e. a quantitative value of the degree of dissimilarity between the connected genes. The robustness of GFD-Net as a gene network validation tool was demonstrated by performing a ROC analysis on several network repositories. Furthermore, a well-known network was analyzed showing that GFD-Net can also be used to infer knowledge. The relevance of GFD-Net becomes more evident in Section "GFD-Net applied to the study of human diseases" where an example of how GFD-Net can be applied to the study of human diseases is presented. GFD-Net is available as an open-source Cytoscape app which offers a user-friendly interface to configure and execute the algorithm as well as the ability to visualize and interact with the results(http://apps.cytoscape.org/apps/gfdnet). Copyright © 2017 Elsevier Inc. All rights reserved.

Microcystin distribution in physical size class separations of natural plankton communities

USGS Publications Warehouse

Graham, J.L.; Jones, J.R.

2007-01-01

Phytoplankton communities in 30 northern Missouri and Iowa lakes were physically separated into 5 size classes (>100 ??m, 53-100 ??m, 35-53 ??m, 10-35 ??m, 1-10 ??m) during 15-21 August 2004 to determine the distribution of microcystin (MC) in size fractionated lake samples and assess how net collections influence estimates of MC concentration. MC was detected in whole water (total) from 83% of takes sampled, and total MC values ranged from 0.1-7.0 ??g/L (mean = 0.8 ??g/L). On average, MC in the > 100 ??m size class comprised ???40% of total MC, while other individual size classes contributed 9-20% to total MC. MC values decreased with size class and were significantly greater in the >100 ??m size class (mean = 0.5 ??g /L) than the 35-53 ??m (mean = 0.1 ??g/L), 10-35 ??m (mean = 0.0 ??g/L), and 1-10 ??m (mean = 0.0 ??g/L) size classes (p < 0.01). MC values in nets with 100-??m, 53-??m, 35-??m, and 10-??m mesh were cumulatively summed to simulate the potential bias of measuring MC with various size plankton nets. On average, a 100-??m net underestimated total MC by 51%, compared to 37% for a 53-??m net, 28% for a 35-??m net, and 17% for a 10-??m net. While plankton nets consistently underestimated total MC, concentration of algae with net sieves allowed detection of MC at low levels (???0.01 ??/L); 93% of lakes had detectable levels of MC in concentrated samples. Thus, small mesh plankton nets are an option for documenting MC occurrence, but whole water samples should be collected to characterize total MC concentrations. ?? Copyright by the North American Lake Management Society 2007.

Electrostatic coating enhances bioavailability of insecticides and breaks pyrethroid resistance in mosquitoes

PubMed Central

Andriessen, Rob; Snetselaar, Janneke; Suer, Remco A.; Osinga, Anne J.; Deschietere, Johan; Lyimo, Issa N.; Mnyone, Ladslaus L.; Brooke, Basil D.; Ranson, Hilary; Knols, Bart G. J.; Farenhorst, Marit

2015-01-01

Insecticide resistance poses a significant and increasing threat to the control of malaria and other mosquito-borne diseases. We present a novel method of insecticide application based on netting treated with an electrostatic coating that binds insecticidal particles through polarity. Electrostatic netting can hold small amounts of insecticides effectively and results in enhanced bioavailability upon contact by the insect. Six pyrethroid-resistant Anopheles mosquito strains from across Africa were exposed to similar concentrations of deltamethrin on electrostatic netting or a standard long-lasting deltamethrin-coated bednet (PermaNet 2.0). Standard WHO exposure bioassays showed that electrostatic netting induced significantly higher mortality rates than the PermaNet, thereby effectively breaking mosquito resistance. Electrostatic netting also induced high mortality in resistant mosquito strains when a 15-fold lower dose of deltamethrin was applied and when the exposure time was reduced to only 5 s. Because different types of particles adhere to electrostatic netting, it is also possible to apply nonpyrethroid insecticides. Three insecticide classes were effective against strains of Aedes and Culex mosquitoes, demonstrating that electrostatic netting can be used to deploy a wide range of active insecticides against all major groups of disease-transmitting mosquitoes. Promising applications include the use of electrostatic coating on walls or eave curtains and in trapping/contamination devices. We conclude that application of electrostatically adhered particles boosts the efficacy of WHO-recommended insecticides even against resistant mosquitoes. This innovative technique has potential to support the use of unconventional insecticide classes or combinations thereof, potentially offering a significant step forward in managing insecticide resistance in vector-control operations. PMID:26324912

Netting bias in tropical bird studies

USGS Publications Warehouse

Coates-Estrada, R.; Dowell, B.A.; Fallon, J.E.; Robbins, C.S.; Wilson, Marcia H.; Sader, Steven A.

1995-01-01

Mist netting is the method most commonly used for gathering quantitative information on birds in the American tropics. Point count surveys or other methods often are used in conjunction with netting to reduce some of the many biases associated with netting, specially the failure of stationary nets within 2 m of the ground to sample birds of the tall canopy. We compare totals by both methods. Even close to the ground there are biases related to time of day and mesh size that have not been addressed in tropical studies. Some researchers operate nets all day, others only in the morning or in the morning and evening. Since 1986 we have netted birds and conducted point count surveys at more than 130 sites representing a broad spectrum of habitats in Mexico, Belize, and Guatemala. Using data only from those days when we could operate nets continuously from about dawn to dusk, we compare capture rates throughout the day to show the bias per part-day operations for certain families and species of birds and for the ratio of neotropical migrants to resident birds. More than half of 5000+ birds captured were caught after noon. Trochilidae and parulinae were captured primarily in the morning, Dendrocolaptidae in the middle of the day. Tyrannidae were more active than most birds in early afternoon, and Turdinae had morning and evening peaks. At each site we use a combination of 30-mm and 36-mm nets. The 30-mm mesh consistently captured more seedeaters, gnatcatchers, and small warblers, whereas the 36-mm mesh was more effective for birds of thrush size and larger.

How reservoirs alter drinking water quality: Organic matter sources, sinks, and transformations

USGS Publications Warehouse

Kraus, Tamara E.C.; Bergamaschi, Brian A.; Hernes, Peter J.; Doctor, Daniel H.; Kendall, Carol; Downing, Bryan D.; Losee, Richard F.

2011-01-01

Within reservoirs, production, transformation, and loss of dissolved organic matter (DOM) occur simultaneously. While the balance between production and loss determines whether a reservoir is a net sink or source of DOM, changes in chemical composition are also important because they affect DOM reactivity with respect to disinfection by-product (DBP) formation. The composition of the DOM pool also provides insight into DOM sources and processing, which can inform reservoir management. We examined the concentration and composition of DOM in San Luis Reservoir, a large off-stream impoundment of the California State Water Project. We used a wide array of DOM chemical tracers including dissolved organic carbon (DOC) concentration, trihalomethane and haloacetic acid formation potentials (THMFP and HAAFP, respectively), absorbance properties, isotopic composition, lignin phenol content, and structural groupings determined by 13C nuclear magnetic resonance (NMR). There were periods when the reservoir was a net source of DOC due to the predominance of algal production (summer), a net sink due to the predominance of degradation (fall–winter), and balanced between production and consumption (spring). Despite only moderate variation in bulk DOC concentration (3.0–3.6 mg C/L), changes in DOM composition indicated that terrestrial-derived material entering the reservoir was being degraded and replaced by aquatic-derived DOM produced within the reservoir. Substantial changes in the propensity of the DOM pool to form THMs and HAAs illustrate that the DBP precursor pool was not directly coupled to bulk DOC concentration and indicate that algal production is an important source of DBP precursors. Results suggest reservoirs have the potential to attenuate DOM amount and reactivity with respect to DBP precursors via degradative processes; however, these benefits can be decreased or even negated by the production of algal-derived DOM.

Bulk energy storage increases United States electricity system emissions.

PubMed

Hittinger, Eric S; Azevedo, Inês M L

2015-03-03

Bulk energy storage is generally considered an important contributor for the transition toward a more flexible and sustainable electricity system. Although economically valuable, storage is not fundamentally a "green" technology, leading to reductions in emissions. We model the economic and emissions effects of bulk energy storage providing an energy arbitrage service. We calculate the profits under two scenarios (perfect and imperfect information about future electricity prices), and estimate the effect of bulk storage on net emissions of CO2, SO2, and NOx for 20 eGRID subregions in the United States. We find that net system CO2 emissions resulting from storage operation are nontrivial when compared to the emissions from electricity generation, ranging from 104 to 407 kg/MWh of delivered energy depending on location, storage operation mode, and assumptions regarding carbon intensity. Net NOx emissions range from -0.16 (i.e., producing net savings) to 0.49 kg/MWh, and are generally small when compared to average generation-related emissions. Net SO2 emissions from storage operation range from -0.01 to 1.7 kg/MWh, depending on location and storage operation mode.

Pharmacological characterization of a fluorescent uptake assay for the noradrenaline transporter.

PubMed

Haunsø, Anders; Buchanan, Dawn

2007-04-01

The noradrenaline transporter (NET) is a Na(+)/Cl(-) dependent monoamine transporter that mediates rapid clearance of noradrenaline from the synaptic cleft, thereby terminating neuronal signaling. NET is an important target for drug development and is known to be modulated by many psychoactive compounds, including psychostimulants and antidepressants. Here, the authors describe the development and pharmacological characterization of a nonhomogeneous fluorescent NET uptake assay using the compound 4-(4-dimethylaminostyryl)-N-methylpyridinium (ASP(+)). Data presented show that the pharmacology of both the classic radiolabeled (3)H-noradrenaline- and ASP(+)-based uptake assays are comparable, with an excellent correlation between potency obtained for known modulators of NET (r = 0.95, p < 0.0001). Furthermore, the fluorescent uptake assay is highly reproducible and has sufficiently large Z' values to be amenable for high-throughput screening (HTS). The advantage of this assay is compatibility with both 96- and 384-well formats and lack of radioactivity usage. Thus, the authors conclude that the assay is an inexpensive, viable approach for the identification and pharmacological profiling of small-molecule modulators of the monoamine transporter NET and may be amenable for HTS.

Health safety nets can break cycles of poverty and disease: a stochastic ecological model.

PubMed

Plucinski, Mateusz M; Ngonghala, Calistus N; Bonds, Matthew H

2011-12-07

The persistence of extreme poverty is increasingly attributed to dynamic interactions between biophysical processes and economics, though there remains a dearth of integrated theoretical frameworks that can inform policy. Here, we present a stochastic model of disease-driven poverty traps. Whereas deterministic models can result in poverty traps that can only be broken by substantial external changes to the initial conditions, in the stochastic model there is always some probability that a population will leave or enter a poverty trap. We show that a 'safety net', defined as an externally enforced minimum level of health or economic conditions, can guarantee ultimate escape from a poverty trap, even if the safety net is set within the basin of attraction of the poverty trap, and even if the safety net is only in the form of a public health measure. Whereas the deterministic model implies that small improvements in initial conditions near the poverty-trap equilibrium are futile, the stochastic model suggests that the impact of changes in the location of the safety net on the rate of development may be strongest near the poverty-trap equilibrium.

Clams as CO2 generators: The Potamocorbula amurensis example in San Francisco Bay

USGS Publications Warehouse

Chauvaud, Laurent; Thompson, Janet K.; Cloern, James E.; Thouzeau, Gerard

2003-01-01

Respiration and calcium carbonate production by the invasive Asian clam, Potamocorbula amurensis, were calculated to assess their importance as CO2 sources in northern San Francisco Bay. Production, calculated using monthly population density and size structure measured at three sites over 7 yr and a shell length/CaCO3 conversion factor, averaged 221(±184)g CaCO3 m−2yr−1. Net calcium carbonate production by this exotic bivalve releases CO2 at a mean rate of 18(±17)g C m−2yr−1. Respiration by P. amurensis, estimated from secondary production, releases additional CO2 at a mean rate of 37(±34)g C m−2yr−1. Therefore, total net CO2 production by P. amurensis averages 55(±51)g C m−2yr−1 in an estuarine domain where net primary production consumes only 20g inorganic C m−2yr−1. CO2 production by P. amurensis in northern San Francisco Bay is an underestimate of the total CO2 supply from the calcified zoobenthic communities of San Francisco Bay, and results from other studies have suggested that this rate is not unusual for temperate estuaries. Global extrapolation yields a gross CO2 production rate in the world's estuaries of 1x1014g C yr−1, which suggests that calcified benthic organisms in estuaries generate CO2 equal in magnitude to the CO2 emissions from the world's lakes or from planetary volcanism (the net source is determined by the highly variable rate of CO2 consumption by carbonate dissolution). This biogenic CO2 source is increasing because of the continuing global translocation of mollusks and their successful colonization of new habitats.

Clams as CO2 generators: The Potamocorbula amurensis example in San Francisco Bay

USGS Publications Warehouse

Chauvaud, Laurent; Thompson, Janet K.; Cloern, James E.; Thouzeau, Gerard

2003-01-01

Respiration and calcium carbonate production by the invasive Asian clam, Potamocorbula amurensis, were calculated to assess their importance as CO2 sources in northern San Francisco Bay. Production, calculated using monthly population density and size structure measured at three sites over 7 yr and a shell length/CaCO3 conversion factor, averaged 221 (6184) g CaCO3 m22 yr21 . Net calcium carbonate production by this exotic bivalve releases CO2 at a mean rate of 18 (617) g C m22 yr21 . Respiration by P. amurensis, estimated from secondary production, releases additional CO2 at a mean rate of 37 (634) g C m22 yr21 . Therefore, total net CO2 production by P. amurensis averages 55 (651) g C m22 yr21 in an estuarine domain where net primary production consumes only 20 g inorganic C m22 yr21 . CO2 production by P. amurensis in northern San Francisco Bay is an underestimate of the total CO2 supply from the calcified zoobenthic communities of San Francisco Bay, and results from other studies have suggested that this rate is not unusual for temperate estuaries. Global extrapolation yields a gross CO2 production rate in the world’s estuaries of 1 3 1014 g C yr21 , which suggests that calcified benthic organisms in estuaries generate CO2 equal in magnitude to the CO2 emissions from the world’s lakes or from planetary volcanism (the net source is determined by the highly variable rate of CO2 consumption by carbonate dissolution). This biogenic CO2 source is increasing because of the continuing global translocation of mollusks and their successful colonization of new habitats.

Revisiting a Hydrological Analysis Framework with International Satellite Land Surface Climatology Project Initiative 2 Rainfall, Net Radiation, and Runoff Fields

NASA Technical Reports Server (NTRS)

Koster, Randal D.; Fekete, Balazs M.; Huffman, George J.; Stackhouse, Paul W.

2006-01-01

The International Satellite Land Surface Climatology Project Initiative 2 (ISLSCP-2) data set provides the data needed to characterize the surface water budget across much of the globe in terms of energy availability (net radiation) and water availability (precipitation) controls. The data, on average, are shown to be consistent with Budyko s decades-old framework, thereby demonstrating the continuing relevance of Budyko s semiempirical relationships. This consistency, however, appears only when a small subset of the data with hydrologically suspicious behavior is removed from the analysis. In general, the precipitation, net radiation, and runoff data also appear consistent in their interannual variability and in the phasing of their seasonal cycles.

Net-Centric Sensors and Data Sources (N-CSDS) GEODSS Sidecar

NASA Astrophysics Data System (ADS)

Richmond, D.

2012-09-01

Vast amounts of Space Situational Sensor data is collected each day on closed, legacy systems. Massachusetts Institute of Technology Lincoln Laboratory (MIT/LL) developed a Net-Centric approach to expose this data under the Extended Space Sensors Architecture (ESSA) Advanced Concept Technology Demonstration (ACTD). The Net-Centric Sensors and Data Sources (N-CSDS) Ground-based Electro Optical Deep Space Surveillance (GEODSS) Sidecar is the next generation that moves the ESSA ACTD engineering tools to an operational baseline. The N-CSDS GEODSS sidecar high level architecture will be presented, highlighting the features that supports deployment at multiple diverse sensor sites. Other key items that will be covered include: 1) The Web Browser interface to perform searches of historical data 2) The capabilities of the deployed Web Services and example service request/responses 3) Example data and potential user applications will be highlighted 4) Specifics regarding the process to gain access to the N-CSDS GEODSS sensor data in near real time 5) Current status and future deployment plans (Including plans for deployment to the Maui GEODSS Site)

The underlying reasons for very high levels of bed net use, and higher malaria infection prevalence among bed net users than non-users in the Tanzanian city of Dar es Salaam: a qualitative study.

PubMed

Msellemu, Daniel; Shemdoe, Aloysia; Makungu, Christina; Mlacha, Yeromini; Kannady, Khadija; Dongus, Stefan; Killeen, Gerry F; Dillip, Angel

2017-10-23

Bed nets reduce malaria-related illness and deaths, by forming a protective barrier around people sleeping under them. When impregnated with long-lasting insecticide formulations they also repel or kill mosquitoes attempting to feed upon sleeping humans, and can even suppress entire populations of malaria vectors that feed predominantly upon humans. Nevertheless, an epidemiological study in 2012 demonstrated higher malaria prevalence among bed net users than non-users in urban Dar es Salaam, Tanzania. Focus group discussions were conducted with women from four selected wards of Dar es Salaam city, focusing on four major themes relating to bed net use behaviours: (1) reasons for bed net use, (2) reasons for not using bed nets, (3) stimuli or reminders for people to use a bed net (4) perceived reasons for catching malaria while using a bed net. An analytical method by framework grouping of relevant themes was used address key issues of relevance to the study objectives. Codes were reviewed and grouped into categories and themes. All groups said the main reason for bed net use was protection against malaria. Houses with well-screened windows, with doors that shut properly, and that use insecticidal sprays against mosquitoes, were said not to use bed nets, while frequent attacks from malaria was the main stimulus for people to use bed nets. Various reasons were mentioned as potential reasons that compromise bed net efficacy, the most common of which were: (1) bed net sharing by two or more people, especially if one occupant tends to come to bed late at night, and does not tuck in the net 71%; (2) one person shares the bed but does not use the net, moving it away from the side on which s/he sleeps 68%; (3) ineffective usage habits, called ulalavi, in which a sprawling sleeper either touches the net while sleeping up against it or leaves a limb hanging outside of it 68%. Less common reasons mentioned included: (1) Small bed nets which become un-tucked at night (31%); (2) Bed nets with holes large enough to allow mosquitoes to pass (28%); and (3) Going to bed late after already being bitten outdoors (24%). Behaviours associated with bed net use like; bed sharing, bed net non compliant-bedfellow, sleeping pattern like ulalavi and some physical bed net attributes compromise its effectiveness and supposedly increase of malaria infection to bed net users. While some well-screened houses looked to instigate low malaria prevalence to non-bed net users.

Systematic analysis of nonlinear ground motion and temporal changes of material properties produced by small and medium earthquakes

NASA Astrophysics Data System (ADS)

Wu, C.; Peng, Z.; Ben-Zion, Y.

2009-12-01

Recent studies based on spectral ratio analysis have found clear temporal changes of material properties in the shallow crust and around active fault zones during large earthquakes with peak ground acceleration (PGA) larger than 100-200 gals (e.g., Sawazaki et al., GRL, 2006; Rubenstein et al., JGR, 2007; Wu et al., GJI, 2009). The temporal evolution of properties is generally characterized by a clear drop of resonant frequency and increased damping, followed by logarithmic recoveries with time. The shift in resonant frequency and damping are considered two hallmarks of nonlinear response associated with increasing material damage. However, an existing damage can produce similar changes in resonance curves with increasing wave amplitude, even in cases when the material damage does not increase (Lyakhovsky et al., GJI, 2009). In such cases the recovery of resonance properties with reduced source amplitude should be essentially instantaneous. It is important to distinguish with in situ seismic data nonlinear wave propagation effects that reflect fixed vs. evolving material damage. Here we systematically analyze temporal changes of material properties and nonlinear response associated with small and medium earthquakes, using seismic data recorded by the Japanese Strong Motion Network KIK-Net, a temporary 10-station PASSCAL seismic network along the North Anatolian Fault in Turkey, and the borehole and surface stations around the Parkfield section of the San Andreas fault. We compute the spectral ratios of windowed records from a pair of target and reference stations, and apply the sliding-window to the entire seismic records including the pre-event noise, P and S waves, and the early and late S-coda waves. We choose small and medium events to reduce the effects from additional material damage and use small sliding-window size to capture the subtle changes in the spectral ratios. The spectral ratio traces from windows within certain PGA ranges are then stacked to enhance the stability of the results. The preliminary results from the KIK-Net data suggest that the resonant frequency starts to decrease for PGA levels of several tens of gals, followed by near instantaneous recovery. Updated results from analysis of all the datasets will be presented in the meeting.

Rates and Genomic Consequences of Spontaneous Mutational Events in Drosophila melanogaster

PubMed Central

Schrider, Daniel R.; Houle, David; Lynch, Michael; Hahn, Matthew W.

2013-01-01

Because spontaneous mutation is the source of all genetic diversity, measuring mutation rates can reveal how natural selection drives patterns of variation within and between species. We sequenced eight genomes produced by a mutation-accumulation experiment in Drosophila melanogaster. Our analysis reveals that point mutation and small indel rates vary significantly between the two different genetic backgrounds examined. We also find evidence that ∼2% of mutational events affect multiple closely spaced nucleotides. Unlike previous similar experiments, we were able to estimate genome-wide rates of large deletions and tandem duplications. These results suggest that, at least in inbred lines like those examined here, mutational pressures may result in net growth rather than contraction of the Drosophila genome. By comparing our mutation rate estimates to polymorphism data, we are able to estimate the fraction of new mutations that are eliminated by purifying selection. These results suggest that ∼99% of duplications and deletions are deleterious—making them 10 times more likely to be removed by selection than nonsynonymous mutations. Our results illuminate not only the rates of new small- and large-scale mutations, but also the selective forces that they encounter once they arise. PMID:23733788

Prevention of malaria with pyrethroid treated bednets.

PubMed

Curtis, C

1997-01-01

Malaria parasites (Plasmodium) are carried from person to person by female mosquitoes of the genus Anopheles. 80-90% of malaria incidence worldwide occurs in Africa. The main Anopheles species in Africa which bite humans are A. gambiae and A. funestus. Since these animals feed upon humans mainly during late night when most people are in bed, the consistent use of bednets can block the transmission of malaria. However, bednets should be treated with synthetic pyrethroid insecticides, for the physical barrier of bednets is often inadequate to prevent the entry of Anopheles. In addition, the mosquitoes are drawn to the bednets by the carbon dioxide and body odor emitted by the occupant. The insecticide-treated nets therefore double as mosquito traps. Bednets are treated by dipping them into an aqueous emulsion of a pyrethroid, wringing them out, then laying them out to dry. A considerable number of mosquitoes can be killed with a relatively small amount of insecticide. A treated net's insecticidal power can be tested by wrapping part of it around a wire frame, then introducing some Anopheles mosquitoes inside the frame. A median mosquito knockdown time of less than 10 minutes inside the net indicates a good pyrethroid deposit. The persistence of a net's insecticidal power is considerably reduced if the net is vigorously washed. People vary in the frequency they wash their nets. Most villagers in Tanzania were found to wash and retreat their nets every 6 months.

An application of deep learning in the analysis of stellar spectra

NASA Astrophysics Data System (ADS)

Fabbro, S.; Venn, K. A.; O'Briain, T.; Bialek, S.; Kielty, C. L.; Jahandar, F.; Monty, S.

2018-04-01

Spectroscopic surveys require fast and efficient analysis methods to maximize their scientific impact. Here, we apply a deep neural network architecture to analyse both SDSS-III APOGEE DR13 and synthetic stellar spectra. When our convolutional neural network model (StarNet) is trained on APOGEE spectra, we show that the stellar parameters (temperature, gravity, and metallicity) are determined with similar precision and accuracy as the APOGEE pipeline. StarNet can also predict stellar parameters when trained on synthetic data, with excellent precision and accuracy for both APOGEE data and synthetic data, over a wide range of signal-to-noise ratios. In addition, the statistical uncertainties in the stellar parameter determinations are comparable to the differences between the APOGEE pipeline results and those determined independently from optical spectra. We compare StarNet to other data-driven methods; for example, StarNet and the Cannon 2 show similar behaviour when trained with the same data sets; however, StarNet performs poorly on small training sets like those used by the original Cannon. The influence of the spectral features on the stellar parameters is examined via partial derivatives of the StarNet model results with respect to the input spectra. While StarNet was developed using the APOGEE observed spectra and corresponding ASSET synthetic data, we suggest that this technique is applicable to other wavelength ranges and other spectral surveys.

Electro shield system applications on set gill net as efforts to preserve shark resources

NASA Astrophysics Data System (ADS)

Fitri Aristi, DP; Boesono, H.; Prihantoko, K. E.; Gautama, D. Y.

2018-05-01

Sharks are kind of ETP biota (Endangered, Threatened, and Protected), and are generally caught as by catch during fishing operations. In addition, sharks are one of the biota that plays a role in the life cycle in coastal waters. The Electro Shield System (ESS) was a device with an electromagnetic wave source that the shark can detect and make it afraid. ESS can be applied to set gill net operation to prevent the shark from getting caught. The objective of the study was to analyze the ESS on shark catches during set gill net operations. The research method was experimental fishing, conducted in March-May 2017 in Bangka Belitung Islands, Indonesia. Design the study by comparing shark catches during set gill net operation between those without using ESS (control) and using ESS with frequency 55 Hz. The shark catch by using Electro Shield System was 5.26% lower than control (7.80%). T-student analysis (sign 0.05) indicates that there was a significant difference between the set gill net without ESS and using the ESS against shark biota as bycatch. This indicates that the application of ESS in set gill net can reduce the capture of shark as by catch.

Planning long lasting insecticide treated net campaigns: should households’ existing nets be taken into account?

PubMed Central

2013-01-01

Background Mass distribution of long-lasting insecticide treated bed nets (LLINs) has led to large increases in LLIN coverage in many African countries. As LLIN ownership levels increase, planners of future mass distributions face the challenge of deciding whether to ignore the nets already owned by households or to take these into account and attempt to target individuals or households without nets. Taking existing nets into account would reduce commodity costs but require more sophisticated, and potentially more costly, distribution procedures. The decision may also have implications for the average age of nets in use and therefore on the maintenance of universal LLIN coverage over time. Methods A stochastic simulation model based on the NetCALC algorithm was used to determine the scenarios under which it would be cost saving to take existing nets into account, and the potential effects of doing so on the age profile of LLINs owned. The model accounted for variability in timing of distributions, concomitant use of continuous distribution systems, population growth, sampling error in pre-campaign coverage surveys, variable net ‘decay’ parameters and other factors including the feasibility and accuracy of identifying existing nets in the field. Results Results indicate that (i) where pre-campaign coverage is around 40% (of households owning at least 1 LLIN), accounting for existing nets in the campaign will have little effect on the mean age of the net population and (ii) even at pre-campaign coverage levels above 40%, an approach that reduces LLIN distribution requirements by taking existing nets into account may have only a small chance of being cost-saving overall, depending largely on the feasibility of identifying nets in the field. Based on existing literature the epidemiological implications of such a strategy is likely to vary by transmission setting, and the risks of leaving older nets in the field when accounting for existing nets must be considered. Conclusions Where pre-campaign coverage levels established by a household survey are below 40% we recommend that planners do not take such LLINs into account and instead plan a blanket mass distribution. At pre-campaign coverage levels above 40%, campaign planners should make explicit consideration of the cost and feasibility of accounting for existing LLINs before planning blanket mass distributions. Planners should also consider restricting the coverage estimates used for this decision to only include nets under two years of age in order to ensure that old and damaged nets do not compose too large a fraction of existing net coverage. PMID:23763773

Planning long lasting insecticide treated net campaigns: should households' existing nets be taken into account?

PubMed

Yukich, Joshua; Bennett, Adam; Keating, Joseph; Yukich, Rudy K; Lynch, Matt; Eisele, Thomas P; Kolaczinski, Kate

2013-06-14

Mass distribution of long-lasting insecticide treated bed nets (LLINs) has led to large increases in LLIN coverage in many African countries. As LLIN ownership levels increase, planners of future mass distributions face the challenge of deciding whether to ignore the nets already owned by households or to take these into account and attempt to target individuals or households without nets. Taking existing nets into account would reduce commodity costs but require more sophisticated, and potentially more costly, distribution procedures. The decision may also have implications for the average age of nets in use and therefore on the maintenance of universal LLIN coverage over time. A stochastic simulation model based on the NetCALC algorithm was used to determine the scenarios under which it would be cost saving to take existing nets into account, and the potential effects of doing so on the age profile of LLINs owned. The model accounted for variability in timing of distributions, concomitant use of continuous distribution systems, population growth, sampling error in pre-campaign coverage surveys, variable net 'decay' parameters and other factors including the feasibility and accuracy of identifying existing nets in the field. Results indicate that (i) where pre-campaign coverage is around 40% (of households owning at least 1 LLIN), accounting for existing nets in the campaign will have little effect on the mean age of the net population and (ii) even at pre-campaign coverage levels above 40%, an approach that reduces LLIN distribution requirements by taking existing nets into account may have only a small chance of being cost-saving overall, depending largely on the feasibility of identifying nets in the field. Based on existing literature the epidemiological implications of such a strategy is likely to vary by transmission setting, and the risks of leaving older nets in the field when accounting for existing nets must be considered. Where pre-campaign coverage levels established by a household survey are below 40% we recommend that planners do not take such LLINs into account and instead plan a blanket mass distribution. At pre-campaign coverage levels above 40%, campaign planners should make explicit consideration of the cost and feasibility of accounting for existing LLINs before planning blanket mass distributions. Planners should also consider restricting the coverage estimates used for this decision to only include nets under two years of age in order to ensure that old and damaged nets do not compose too large a fraction of existing net coverage.

Iogenic Plasma and its Rotation-Driven Transport in Jupiter's Magnetosphere

NASA Technical Reports Server (NTRS)

Smyth, William H.

2001-01-01

Model calculations are reported for the Iogenic plasma source created by atomic oxygen and sulfur above Io's exobase in the corona and extended clouds (Outer Region). On a circumplanetary scale, two-dimensional distributions produced by integrating the proper three dimensional rate information for electron impact and charge exchange processes along the magnetic field lines are presented for the pickup ion rates, the net-mass and total-mass loading rates, the mass per unit magnetic flux rate, the pickup conductivity, the radial pickup current, and the net-energy loading rate for the plasma torus. All of the two-dimensional distributions are highly peaked at Io's location and hence highly asymmetric about Jupiter. The Iogenic plasma source is also calculated on a much smaller near-Io scale to investigate the structure of the highly peak rates centered about lo's instantaneous location. The Iogenic plasma source for the Inner Region (pickup rates produced below Io's exobase) is, however, expected to be the dominant source near lo for the formation of the plasma torus ribbon and to be a comparable source, if not a larger contributor, to the energy budget of the plasma torus, so as to provide the necessary power to sustain the plasma torus radiative loss rate.

The importance of using open source technologies and common standards for interoperability within eHealth: Perspectives from the Millennium Villages Project

PubMed Central

Borland, Rob; Barasa, Mourice; Iiams-Hauser, Casey; Velez, Olivia; Kaonga, Nadi Nina; Berg, Matt

2013-01-01

The purpose of this paper is to illustrate the importance of using open source technologies and common standards for interoperability when implementing eHealth systems and illustrate this through case studies, where possible. The sources used to inform this paper draw from the implementation and evaluation of the eHealth Program in the context of the Millennium Villages Project (MVP). As the eHealth Team was tasked to deploy an eHealth architecture, the Millennium Villages Global-Network (MVG-Net), across all fourteen of the MVP sites in Sub-Saharan Africa, the team recognized the need for standards and uniformity but also realized that context would be an important factor. Therefore, the team decided to utilize open source solutions. The MVP implementation of MVG-Net provides a model for those looking to implement informatics solutions across disciplines and countries. Furthermore, there are valuable lessons learned that the eHealth community can benefit from. By sharing lessons learned and developing an accessible, open-source eHealth platform, we believe that we can more efficiently and rapidly achieve the health-related and collaborative Millennium Development Goals (MDGs). PMID:22894051

Effects of Long-Term CO2 Enrichment on Soil-Atmosphere CH4 Fluxes and the Spatial Micro-Distribution of Methanotrophic Bacteria.

PubMed

Karbin, Saeed; Guillet, Cécile; Kammann, Claudia I; Niklaus, Pascal A

2015-01-01

Effects of elevated atmospheric CO2 concentrations on plant growth and associated C cycling have intensively been studied, but less is known about effects on the fluxes of radiatively active trace gases other than CO2. Net soil-atmosphere CH4 fluxes are determined by the balance of soil microbially-driven methane (CH4) oxidation and methanogenesis, and both might change under elevated CO2. Here, we studied CH4 dynamics in a permanent grassland exposed to elevated CO2 for 14 years. Soil-atmosphere fluxes of CH4 were measured using large static chambers, over a period of four years. The ecosystem was a net sink for atmospheric CH4 for most of the time except summer to fall when net CH4 emissions occurred. We did not detect any elevated CO2 effects on CH4 fluxes, but emissions were difficult to quantify due to their discontinuous nature, most likely because of ebullition from the saturated zone. Potential methanotrophic activity, determined by incubation of fresh sieved soil under standardized conditions, also did not reveal any effect of the CO2 treatment. Finally, we determined the spatial micro-distribution of methanotrophic activity at less than 5× atmospheric (10 ppm) and elevated (10000 ppm) CH4 concentrations, using a novel auto-radiographic technique. These analyses indicated that domains of net CH4 assimilation were distributed throughout the analyzed top 15 cm of soils, with no dependence on CH4 concentration or CO2 treatment. Our investigations suggest that elevated CO2 exerts no or only minor effects on CH4 fluxes in the type of ecosystem we studied, at least as long as soil moisture differences are small or absent as was the case here. The autoradiographic analyses further indicate that the spatial niche of CH4 oxidation does not shift in response to CO2 enrichment or CH4 concentration, and that the same type of methanotrophs may oxidize CH4 from atmospheric and soil-internal sources.

Internal loading of phosphorus in a sedimentation pond of a treatment wetland: effect of a phytoplankton crash.

PubMed

Palmer-Felgate, Elizabeth J; Mortimer, Robert J G; Krom, Michael D; Jarvie, Helen P; Williams, Richard J; Spraggs, Rachael E; Stratford, Charlie J

2011-05-01

Sedimentation ponds are widely believed to act as a primary removal process for phosphorus (P) in nutrient treatment wetlands. High frequency in-situ P, ammonium (NH(4)(+)) and dissolved oxygen measurements, alongside occasional water quality measurements, assessed changes in nutrient concentrations and productivity in the sedimentation pond of a treatment wetland between March and June. Diffusive equilibrium in thin films (DET) probes were used to measure in-situ nutrient and chemistry pore-water profiles. Diffusive fluxes across the sediment-water interface were calculated from the pore-water profiles, and dissolved oxygen was used to calculate rates of primary productivity and respiration. The sedimentation pond was a net sink for total P (TP), soluble reactive P (SRP) and NH(4)(+) in March, but became subject to a net internal loading of TP, SRP and NH(4)(+) in May, with SRP concentrations increasing by up to 41μM (1300μl(-1)). Reductions in chlorophyll a and dissolved oxygen concentrations also occurred at this time. The sediment changed from a small net sink of SRP in March (average diffusive flux: -8.2μmolm(-2)day(-1)) to a net source of SRP in June (average diffusive flux: +1324μmolm(-2)day(-1)). A diurnal pattern in water column P concentrations, with maxima in the early hours of the morning, and minima in the afternoon, occurred during May. The diurnal pattern and release of SRP from the sediment were attributed to microbial degradation of diatom biomass, causing reduction of the dissolved oxygen concentration and leading to redox-dependent release of P from the sediment. In June, 2.7mol-Pday(-1) were removed by photosynthesis and 23mol-Pday(-1) were supplied by respiration in the lake volume. SRP was also released through microbial respiration within the water column, including the decomposition of algal matter. It is imperative that consideration to internal recycling is given when maintaining sedimentation ponds, and before the installation of new ponds designed to treat nutrient waste. Copyright © 2011 Elsevier B.V. All rights reserved.

Enriching semantic knowledge bases for opinion mining in big data applications

PubMed Central

Weichselbraun, A.; Gindl, S.; Scharl, A.

2014-01-01

This paper presents a novel method for contextualizing and enriching large semantic knowledge bases for opinion mining with a focus on Web intelligence platforms and other high-throughput big data applications. The method is not only applicable to traditional sentiment lexicons, but also to more comprehensive, multi-dimensional affective resources such as SenticNet. It comprises the following steps: (i) identify ambiguous sentiment terms, (ii) provide context information extracted from a domain-specific training corpus, and (iii) ground this contextual information to structured background knowledge sources such as ConceptNet and WordNet. A quantitative evaluation shows a significant improvement when using an enriched version of SenticNet for polarity classification. Crowdsourced gold standard data in conjunction with a qualitative evaluation sheds light on the strengths and weaknesses of the concept grounding, and on the quality of the enrichment process. PMID:25431524

Mission Driven Scene Understanding: Candidate Model Training and Validation

DTIC Science & Technology

2016-09-01

driven scene understanding. One of the candidate engines that we are evaluating is a convolutional neural network (CNN) program installed on a Windows 10...Theano-AlexNet6,7) installed on a Windows 10 notebook computer. To the best of our knowledge, an implementation of the open-source, Python-based...AlexNet CNN on a Windows notebook computer has not been previously reported. In this report, we present progress toward the proof-of-principle testing

MASTER follow up observation of MAXIJ1727-203

NASA Astrophysics Data System (ADS)

Lipunov, V.; Buckley, D.; Rebolo, R.; Serra-Ricart, M.; Kornilov, V.; Gorbovskoy, E.; Tiurina, N.; Balanutsa, P.; Gorbunov, I.; Kuznetsov, A.; Vladimirov, V.; Gress, O.; Pogrosheva, T.; Vlasenko, D.

2018-06-01

MASTER Global Robotic Net observed MAXI X-ray transient source ( T. Yoneyama et al. ATEL #11683) RA,Dec(2000)=17 27 53, -20 23 20 +-0.33d. We confirm GROND OT ( Arne Rau et al. ATEL #11690) MASTER-IAC auto-detection system ( Lipunov et al., "MASTER Global Robotic Net", Advances in Astronomy, 2010, 30L ) detected MASTER OT J172829.90-202255.91 (1sigma 0.7arcsec) on 2018-06-05 21:52:53.344 (10exp.

Reconciling estimates of the contemporary North American carbon balance among terrestrial biosphere models, atmospheric inversions, and a new approach for estimating net ecosystem exchange from inventory-based data

Treesearch

Daniel J. Hayes; David P. Turner; Graham Stinson; A. David Mcguire; Yaxing Wei; Tristram O. West; Linda S. Heath; Bernardus Dejong; Brian G. McConkey; Richard A. Birdsey; Werner A. Kurz; Andrew R. Jacobson; Deborah N. Huntzinger; Yude Pan; W. Mac Post; Robert B. Cook

2012-01-01

We develop an approach for estimating net ecosystem exchange (NEE) using inventory-based information over North America (NA) for a recent 7-year period (ca. 2000-2006). The approach notably retains information on the spatial distribution of NEE, or the vertical exchange between land and atmosphere of all non-fossil fuel sources and sinks of CO2,...

Classification of pulmonary neuroendocrine tumors: new insights.

PubMed

Pelosi, Giuseppe; Sonzogni, Angelica; Harari, Sergio; Albini, Adriana; Bresaola, Enrica; Marchiò, Caterina; Massa, Federica; Righi, Luisella; Gatti, Gaia; Papanikolaou, Nikolaos; Vijayvergia, Namrata; Calabrese, Fiorella; Papotti, Mauro

2017-10-01

Neuroendocrine tumors of the lung (Lu-NETs) embrace a heterogeneous family of neoplasms classified into four histological variants, namely typical carcinoid (TC), atypical carcinoid (AC), large cell neuroendocrine carcinoma (LCNEC) and small cell lung carcinoma (SCLC). Defining criteria on resection specimens include mitotic count in 2 mm 2 and the presence or absence of necrosis, alongside a constellation of cytological and histological traits including cell size and shape, nuclear features and overall architecture. Clinically, TC are low-grade malignant tumors, AC intermediate-grade malignant tumors and SCLC/LCNEC high-grade malignant full-blown carcinomas with no significant differences in survival between them. Homologous tumors arise in the thymus that occasionally have some difficulties in differentiating from the lung counterparts when presented with large unresectable or metastatic lesions. Immunohistochemistry (IHC) helps refine NE diagnosis at various anatomical sites, particularly on small-sized tissue material, in which only TC and small cell carcinoma categories can be recognized easily on hematoxylin & eosin stain, while AC and LCNEC can only be suggested on such material. The Ki-67 labeling index effectively separates carcinoids from small cell carcinoma and may prove useful for the clinical management of a metastatic disease to help the therapeutic decision-making process. Although carcinoids and high-grade neuroendocrine carcinomas in the lung and elsewhere make up separate tumor categories on molecular grounds, emerging data supports the concept of secondary high-grade NETs arising in the preexisting carcinoids, whose clinical and biological relevance will have to be placed into the proper context for the optimal management of these patients. In this review, we will discuss the selected, recent literature with a focus on current issues regarding Lu-NET nosology, i.e., classification, derivation and tumor evolution.

Streambanks: A net source of sediment and phosphorus to streams and rivers

USDA-ARS?s Scientific Manuscript database

Sediment and phosphorus (P) are two primary pollutants of surface waters. Many studies have investigated loadings from upland sources or even streambed sediment, but in many cases, limited to no data exist to determine sediment and P loading from streambanks on a watershed scale. The objectives of t...

The Galactic Center: A Petaelectronvolt Cosmic-ray Acceleration Factory

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guo, Yi-Qing; Tian, Zhen; Wang, Zhen

2017-02-20

The multiteraelectronvolt γ -rays from the galactic center (GC) have a cutoff at tens of teraelectronvolts, whereas the diffuse emission has no such cutoff, which is regarded as an indication of petaelectronvolt proton acceleration by the HESS experiment. It is important to understand the inconsistency and study the possibility that petaelectronvolt cosmic-ray acceleration could account for the apparently contradictory point and diffuse γ -ray spectra. In this work, we propose that the cosmic rays are accelerated up to greater than petaelectronvolts in the GC. The interaction between cosmic rays and molecular clouds is responsible for the multiteraelectronvolt γ -ray emissionsmore » from both the point and diffuse sources today. Enhanced by the small volume filling factor (VFF) of the clumpy structure, the absorption of the γ -rays leads to a sharp cutoff spectrum at tens of teraelectronvolts produced in the GC. Away from the GC, the VFF grows, and the absorption enhancement becomes negligible. As a result, the spectra of γ -ray emissions for both point and diffuse sources can be successfully reproduced under such a self-consistent picture. In addition, a “surviving tail” at ∼100 TeV is expected from the point source, which can be observed by future projects CTA and LHAASO. Neutrinos are simultaneously produced during proton-proton (PP) collision. With 5–10 years of observations, the KM3Net experiment will be able to detect the petaelectronvolt source according to our calculation.« less

75 FR 27808 - Section 8 Housing Choice Voucher Program-Demonstration Project of Small Area Fair Market Rents in...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-05-18

... voucher programs, but it is unclear what the net effect will be. For example, small area FMRs are likely... standards for definition of CBSAs are based on a review of journey-to-work data, or commuting patterns, as... adequate technical assistance to the participating PHAs and monitor the effects and effectiveness of the...

Optics-Only Calibration of a Neural-Net Based Optical NDE Method for Structural Health Monitoring

NASA Technical Reports Server (NTRS)

Decker, Arthur J.

2004-01-01

A calibration process is presented that uses optical measurements alone to calibrate a neural-net based NDE method. The method itself detects small changes in the vibration mode shapes of structures. The optics-only calibration process confirms previous work that the sensitivity to vibration-amplitude changes can be as small as 10 nanometers. A more practical value in an NDE service laboratory is shown to be 50 nanometers. Both model-generated and experimental calibrations are demonstrated using two implementations of the calibration technique. The implementations are based on previously published demonstrations of the NDE method and an alternative calibration procedure that depends on comparing neural-net and point sensor measurements. The optics-only calibration method, unlike the alternative method, does not require modifications of the structure being tested or the creation of calibration objects. The calibration process can be used to test improvements in the NDE process and to develop a vibration-mode-independence of damagedetection sensitivity. The calibration effort was intended to support NASA s objective to promote safety in the operations of ground test facilities or aviation safety, in general, by allowing the detection of the gradual onset of structural changes and damage.

Postbreeding dispersal and drift-net mortality of endangered Japanese Murrelets

USGS Publications Warehouse

Piatt, John F.; Gould, Patrick J.

1994-01-01

The incidental catch of seabirds in high-seas drift nets was recorded in 1990-1991 by scientific observers on commercial squid and large-mesh fishery vessels operating in the North Pacific Transitional Zone. Twenty-six Synthliboramphus murrelet deaths were recorded in the months of August through December. All but one were from the Korean squid fishery in a small area bounded by 38°-44°N and 142°-157°E. Five specimens of the dead birds were collected and later identified as Japanese Murrelets (S. wumizusume). As fishing effort was widely distributed over a large area east of Japan, these data suggest that postbreeding Japanese Murrelets migrate north to winter in a relatively small area southeast of Hokkaido, where persistent eddies form at the confluence of the Oyashio and Kuroshio currents. Fronts between cold Oyashio water and Kuroshio warm-core eddies promote the aggregation of zooplankton and pelagic fishes, which in turn may attract murrelets during the nonbreeding season. The estimated total mortality of Japanese Murrelets in high-seas drift-net fisheries represents a significant proportion of the total world population of this rare and endangered species.

Specifics of phytomass combustion in small experimental device

NASA Astrophysics Data System (ADS)

Lenhard, Richard; Mičieta, Jozef; Jandačka, Jozef; Gavlas, Stanislav

2015-05-01

A wood pellet combustion carries out with high efficiency and comfort in modern pellet boilers. These facts help to increase the amount of installed pellet boilers in households. The combustion process quality depends besides the combustion conditions also on the fuel quality. The wood pellets, which don`t contain the bark and branches represent the highest quality. Because of growing pellet demand, an herbal biomass (phytomass), which is usually an agricultural by-product becomes economically attractive for pellet production. Although the phytomass has the net calorific value relatively slightly lower than the wood biomass, it is often significantly worse in view of the combustion process and an emission production. The combustion of phytomass pellets causes various difficulties in small heat sources, mainly due to a sintering of fuel residues. We want to avoid the ash sintering by a lowering of temperature in the combustion chamber below the ash sintering temperature of phytomass via the modification of a burner design. For research of the phytomass combustion process in the small boilers is constructed the experimental combustion device. There will investigate the impact of cooling intensity of the combustion chamber on the combustion process and emissions. Arising specific requirements from the measurement will be the basis for the design of the pellet burner and for the setting of operating parameters to the trouble-free phytomass combustion was guaranteed.

Money for nothing? The net costs of medical training.

PubMed

Barros, Pedro P; Machado, Sara R

2010-09-01

One of the stages of medical training is the residency programme. Hosting institutions often claim compensation for the training provided. How much should this compensation be? According to our results, given the benefits arising from having residents among the house staff, no transfer (either tuition fee or subsidy) should be set to compensate the hosting institution for providing medical training. This paper quantifies the net costs of medical training, defined as the training costs over and above the wage paid. We jointly consider two effects. On the one hand, residents take extra time and resources from both the hosting institution and the supervisor. On the other hand, residents can be regarded as a less expensive substitute to nurses and/or graduate physicians, in the production of health care, both in primary care centres and hospitals. The net effect can be either positive or negative. We use the fact that residents, in Portugal, are centrally allocated to National Health Service hospitals to treat them as a fixed exogenous production factor. The data used comes from Portuguese hospitals and primary care centres. Cost function estimates point to a small negative marginal impact of residents on hospitals' (-0.02%) and primary care centres' (-0.9%) costs. Nonetheless, there is a positive relation between size and cost to the very large hospitals and primary care centres. Our approach to estimation of residents' costs controls for other teaching activities hospitals might have (namely undergraduate Medical Schools). Overall, the net costs of medical training appear to be quite small.

Regulation Effects of Water and Nitrogen on the Source-Sink Relationship in Potato during the Tuber Bulking Stage

PubMed Central

Li, Wenting; Xiong, Binglin; Wang, Shiwen; Deng, Xiping; Yin, Lina; Li, Hongbing

2016-01-01

The source-sink relationship determines crop yield, and it is largely regulated by water and nutrients in agricultural production. This has been widely investigated in cereals, but fewer studies have been conducted in root and tuber crops such as potato (Solanum tuberosum L.). The objective of this study was to investigate the source-sink relationship in potato and the regulation of water and nitrogen on the source-sink relationship during the tuber bulking stage. A pot experiment using virus-free plantlets of the Atlantic potato cultivar was conducted, using three water levels (50%, 70% and 90% of field capacity) and three nitrogen levels (0, 0.2, 0.4 g N∙kg−1 soil). The results showed that, under all water and nitrogen levels, plant source capacity were small at the end of the experiment, since photosynthetic activity in leaves were low and non-structural reserves in underground stems were completely remobilized. While at this time, there were very big differences in maximum and minimum tuber number and tuber weight, indicating that the sink tuber still had a large potential capacity to take in assimilates. These results suggest that the source-supplied assimilates were not sufficient enough to meet the demands of sink growth. Thus, we concluded that, unlike cereals, potato yield is more likely to be source-limited than sink-limited during the tuber bulking stage. Water and nitrogen are two key factors in potato production management. Our results showed that water level, nitrogen level and the interaction between water and nitrogen influence potato yield mainly through affecting source capacity via the net photosynthetic rate, total leaf area and leaf life span. Well-watered, sufficient nitrogen and well-watered combined with sufficient nitrogen increased yield mainly by enhancing the source capacity. Therefore, this suggests that increasing source capacity is more crucial to improve potato yield. PMID:26752657

Life cycle assessment of a household solid waste source separation programme: a Swedish case study.

PubMed

Bernstad, Anna; la Cour Jansen, Jes; Aspegren, Henrik

2011-10-01

The environmental impact of an extended property close source-separation system for solid household waste (i.e., a systems for collection of recyclables from domestic properties) is investigated in a residential area in southern Sweden. Since 2001, households have been able to source-separate waste into six fractions of dry recyclables and food waste sorting. The current system was evaluated using the EASEWASTE life cycle assessment tool. Current status is compared with an ideal scenario in which households display perfect source-separation behaviour and a scenario without any material recycling. Results show that current recycling provides substantial environmental benefits compared to a non-recycling alternative. The environmental benefit varies greatly between recyclable fractions, and the recyclables currently most frequently source-separated by households are often not the most beneficial from an environmental perspective. With optimal source-separation of all recyclables, the current net contribution to global warming could be changed to a net-avoidance while current avoidance of nutrient enrichment, acidification and photochemical ozone formation could be doubled. Sensitivity analyses show that the type of energy substituted by incineration of non-recycled waste, as well as energy used in recycling processes and in the production of materials substituted by waste recycling, is of high relevance for the attained results.

Global distribution of alkyl nitrates and their impacts on reactive nitrogen in remote regions constrained by aircraft observations and chemical transport modeling

NASA Astrophysics Data System (ADS)

Fisher, J. A.; Atlas, E. L.; Blake, D. R.; Barletta, B.; Thompson, C. R.; Peischl, J.; Tzompa Sosa, Z. A.; Ryerson, T. B.; Murray, L. T.

2017-12-01

Nitrogen oxides (NO + NO­2 = NOx) are precursors in the formation of tropospheric ozone, contribute to the formation of aerosols, and enhance nitrogen deposition to ecosystems. While direct emissions tend to be localised over continental source regions, a significant source of NOx to the remote troposphere comes from degradation of other forms of reactive nitrogen. Long-lived, small chain alkyl nitrates (RONO2) including methyl, ethyl and propyl nitrates may be particularly significant forms of reactive nitrogen in the remote atmosphere as they are emitted directly by the ocean in regions where reactive nitrogen is otherwise very low. They also act as NOx reservoir species, sequestering NO­x in source regions and releasing it far downwind—and through this process may become increasingly important reservoirs as methane, ethane, and propane emissions grow. However, small RONO2 are not consistently included in global atmospheric chemistry models, and their distributions and impacts remain poorly constrained. In this presentation, we will describe a new RONO2 simulation in the GEOS-Chem chemical transport model evaluated using a large ensemble of aircraft observations collected over a 20-year period. The observations are largely concentrated over the Pacific Ocean, beginning with PEM-Tropics in the late 1990s and continuing through the recent HIPPO and ATom campaigns. Both observations and model show enhanced RONO2 in the tropical Pacific boundary layer that is consistent with a photochemical source in seawater. The model reproduces a similarly large enhancement over the southern ocean by assuming a large pool of oceanic RONO2 here, but the source of the seawater enhancement in this environment remains uncertain. We find that including marine RONO2 in the simulation is necessary to correct a large underestimate in simulated reactive nitrogen throughout the Pacific marine boundary layer. We also find that the impacts on NOx export from continental source regions are limited as RONO2 formation competes with other NO­x reservoirs such as PAN, leading to re-partitioning of reactive nitrogen rather than a net reactive nitrogen source. Further implications for NOx and ozone, as well as the impacts of recent changes in the global distribution of methane, ethane, propane, and NOx emissions, will also be discussed.

Estimates of ion sources in deciduous and coniferous throughfall

USGS Publications Warehouse

Puckett, L.J.

1990-01-01

Estimates of external and internal sources of ions in net throughfall deposition were derived for a deciduous and coniferous canopy by use of multiple regression. The externel source component appears to be dominated by dry deposition of Ca2+, SO2 and NO3- during dormant and growing seasons for the two canopy types. Increases in the leaching rates of K+ and Mg2+ during the growing season reflect the presence of leaves in the deciduous canopy and increased physiological activity in both canopies. Internal leaching rates for SO42- doubled during the growing season presumably caused by increased physiological activity and uptake of SO2 through stomates. Net deposition of SO42- in throughfall during the growing season appears highly dependent on stomatal uptake of SO2. Estimates of SO2 deposition velocities were 0.06 cm s-1 and 0.13 cm s-1 for the deciduous and coniferous canopies, respectively, during the dormant season, and 0.30 cm s-1 and 0.43 cm s-1 for the deciduous and coniferous canopies, respectively, during the growing season. For the ions of major interest with respect to ecosystem effects, namely H+, NO3- and SO42-, precipitation inputs generally outweighed estimates of dry deposition input. However, net throughfall deposition of NO3- and SO42- accounted for 20-47 and 34-50 per cent, respectively, of total deposition of those ions. Error estimates of ion sources were at least 50-100 per cent and the method is subject to several assumptions and limitations.

Spatial and Temporal Stress Drop Variations of the 2011 Tohoku Earthquake Sequence

NASA Astrophysics Data System (ADS)

Miyake, H.

2013-12-01

The 2011 Tohoku earthquake sequence consists of foreshocks, mainshock, aftershocks, and repeating earthquakes. To quantify spatial and temporal stress drop variations is important for understanding M9-class megathrust earthquakes. Variability and spatial and temporal pattern of stress drop is a basic information for rupture dynamics as well as useful to source modeling. As pointed in the ground motion prediction equations by Campbell and Bozorgnia [2008, Earthquake Spectra], mainshock-aftershock pairs often provide significant decrease of stress drop. We here focus strong motion records before and after the Tohoku earthquake, and analyze source spectral ratios considering azimuth- and distance dependency [Miyake et al., 2001, GRL]. Due to the limitation of station locations on land, spatial and temporal stress drop variations are estimated by adjusting shifts from the omega-squared source spectral model. The adjustment is based on the stochastic Green's function simulations of source spectra considering azimuth- and distance dependency. We assumed the same Green's functions for event pairs for each station, both the propagation path and site amplification effects are cancelled out. Precise studies of spatial and temporal stress drop variations have been performed [e.g., Allmann and Shearer, 2007, JGR], this study targets the relations between stress drop vs. progression of slow slip prior to the Tohoku earthquake by Kato et al. [2012, Science] and plate structures. Acknowledgement: This study is partly supported by ERI Joint Research (2013-B-05). We used the JMA unified earthquake catalogue and K-NET, KiK-net, and F-net data provided by NIED.

Acoustic backscatter measurements with a 153 kHz ADCP in the northeastern Gulf of Mexico: determination of dominant zooplankton and micronekton scatterers

NASA Astrophysics Data System (ADS)

Ressler, Patrick H.

2002-11-01

A 153 kHz narrowband acoustic Doppler current profiler (ADCP) was used to measure volume backscattering strength ( Sv) during a deepwater oceanographic survey of cetacean and seabird habitat in the northeastern Gulf of Mexico. Sv was positively related to zooplankton and micronekton biomass (wet displacement volume) in 'sea-truth' net hauls made with a 1 m 2 Multiple Opening-Closing Net Environmental Sensing System (MOCNESS). A subset of these MOCNESS tows was used to explore the relationship between the numerical densities of various taxonomic categories of zooplankton and the ADCP backscatter signal. Crustaceans, small fish, and fragments of non-gas-bearing siphonophores in the net samples all showed significant, positive correlations with the acoustic signal, while other types of gelatinous zooplankton, pteropod and atlantid molluscs, and gas-filled siphonophore floats showed no significant correlation with Sv. Previously published acoustic scattering models for zooplankton were used to calculate expected scattering for several general zooplankton types and sizes for comparison with the field data. Even though gelatinous material often made up a large fraction of the total biomass, crustaceans, small fish, and pteropods were most likely the important scatterers. Since only crustacean and small fish densities were significantly correlated with Sv, it is suggested that Sv at 153 kHz can be used as a relative proxy for the abundance of these organisms in the Gulf of Mexico.

Effect of rapid cooling and acidic pH on cellular homeostasis of Pectinatus frisingensis, a strictly anaerobic beer-spoilage bacterium.

PubMed

Chihib, N E; Tholozan, J L

1999-06-01

Pectinatus frisingensis is a strictly anaerobic mesophilic bacterium involved in bottled beer spoilage. Cellular volume, adenylate energy charge, intracellular pH and intracellular potassium concentration measurements were performed in late exponential-phase cell suspensions placed in different physiological conditions, to evaluate the capability of this bacterium to maintain cellular homeostasis. The intracellular pH was calculated from the intracellular accumulation of a [carboxyl-14C]benzoic acid. Optimum physiological conditions were the presence of a carbon source and pH of 6.2, hostile conditions were a pH 4.5, absence of a carbon source, and rapid cooling treatment. The cell was able to maintain a higher intracellular pH than the external pH under all conditions. Intracellular volume was lower at pH 4.5 than at pH 6.2. A low net potassium efflux rate was routinely measured in starving cells, while glucose addition promoted immediate net potassium uptake from the medium. Cooling treatment resulted in sudden net potassium efflux from the cell, a decrease of the intracellular pH, and low modifications of the adenylate energy charge in metabolizing-glucose cell suspensions. Thus, cold treatment perturbs the P. frisingensis homeostasis but the bacteria were able to restore their homeostasis in the presence of a carbon source, and under warm conditions.

Neuroendocrine Tumors in the Stomach, Duodenum, and Pancreas Accompanied by Novel MEN1 Gene Mutation.

PubMed

Yang, Min A; Lee, Woong Ki; Shin, Hong Shik; Park, Sung Hyun; Kim, Byung Sun; Kim, Ji Woong; Cho, Jin Woong; Yun, So Hee

2017-03-25

Multiple endocrine neoplasia type 1 (MEN1) syndrome is a relatively rare disease, characterized by the occurrence of multiple endocrine tumors in the parathyroid and pituitary glands as well as the pancreas. Here, we report a case of MEN1 with neuroendocrine tumors (NETs) in the stomach, duodenum, and pancreas. A 53-year-old man visited our hospital to manage gastric NET. Five years prior to his visit, he had undergone surgery for incidental meningioma. His brother had pancreatic nodules and a history of surgery for adrenal adenoma. His brother's daughter also had pancreatic nodules, but had not undergone surgery. The lesion was treated by endoscopic submucosal dissection and diagnosed as a grade 1 NET. Another small NET was detected in the second duodenal portion, resected by endoscopic submucosal dissection, which was also diagnosed as a grade 1 NET. During evaluation, three nodules were detected in the pancreas, and no evidence of pituitary, parathyroid tumors, or metastasis was observed. After surgery, the pancreatic lesions were diagnosed as NETs, with the same immunohistochemical patterns as those of the stomach and duodenum. Genetic testing was performed, and a heterozygous mutation was detected in the MEN1 gene, which is located on 11q13.

Naturally occurring bioactive compounds from four repellent essential oils against Bemisia tabaci whiteflies.

PubMed

Deletre, Emilie; Chandre, Fabrice; Barkman, Barbara; Menut, Chantal; Martin, Thibaud

2016-01-01

In tropical countries, netting is an effective sustainable tool for protecting horticultural crops against Lepidoptera, although not against small pests such as Bemisia tabaci, while smaller mesh netting can be used in temperate regions. A solution is to combine a net with a repellent. Previously we identified repellent essential oils: lemongrass (Cymbopogon citratus), cinnamon (Cinnamomum zeylanicum), cumin (Cuminum cyminum) and citronella (Cymbopogon winternarius). The present study was designed to identify the active compounds of these essential oils, characterise their biological activity and examine their potential for coating nets. We investigated the efficiency and toxicity of nets dipped in different solutions. We then studied the repellent effect with an olfactometer and the irritant effect by videotracking. Geraniol and citronellol were the most promising net coatings owing to their repellent effect. The repellency, irritancy or toxicity varied with the product and concentration, and these features were independent, indicating that the repellent and the irritant/toxic mechanisms were not the same. The combined effects of these different compounds account for the bioactivity of the mixture, suggesting interactions between the compounds. This new sustainable strategy for protecting vegetable crops against whiteflies is discussed, in addition to the use of companion plants that could produce such bioactive compounds. © 2015 Society of Chemical Industry.

Inhibition of the Ras-Net (Elk-3) pathway by a novel pyrazole that affects microtubules.

PubMed

Wasylyk, Christine; Zheng, Hong; Castell, Christelle; Debussche, Laurent; Multon, Marie-Christine; Wasylyk, Bohdan

2008-03-01

Net (Elk-3/SAP-2/Erp) is a transcription factor that is phosphorylated and activated by the Ras-extracellular signal-regulated kinase (Erk) signaling pathway and is involved in wound healing, angiogenesis, and tumor growth. In a cell-based screen for small molecule inhibitors of Ras activation of Net transcriptional activity, we identified a novel pyrazole, XRP44X. XRP44X inhibits fibroblast growth factor 2 (FGF-2)-induced Net phosphorylation by the Ras-Erk signaling upstream from Ras. It also binds to the colchicine-binding site of tubulin, depolymerizes microtubules, stimulates cell membrane blebbing, and affects the morphology of the actin skeleton. Interestingly, Combretastin-A4, which produces similar effects on the cytoskeleton, also inhibits FGF-2 Ras-Net signaling. This differs from other classes of agents that target microtubules, which have either little effect (vincristine) or no effect (docetaxel and nocodazole) on the Ras-Net pathway. XRP44X inhibits various cellular properties, including cell growth, cell cycle progression, and aortal sprouting, similar to other molecules that bind to the tubulin colchicine site. XRP44X has the potentially interesting property of connecting two important pathways involved in cell transformation and may thereby represent an interesting class of molecules that could be developed for cancer treatment.

Experimental testing of impact force on rigid and flexible barriers - A comparison

NASA Astrophysics Data System (ADS)

Nagl, Georg; Hübl, Johannes; Chiari, Michael

2016-04-01

The Trattenbach endangers the main western railway track of Austria by floods and debris flows. Three check dams for debris retention were built in the proximal fan area several decades ago. With regard to an improvement of the protective function, these structures have to be renewed. The recent concept of the uppermost barrier is a type of an energy dissipation net structure, stopping debris flows with the ability of self-cleaning by subsequent floods or by machinery employment. The access to the basin is achieved through the slit when the net has been removed. This technical structure consists of a rigid open crown dam with a 4m wide slit. This slit is closed with a flexible net. To verify this protective system, 21 small scale experiments were conducted to test and optimize this new type of Slit Net Dam. To determine the forces on the barrier, in a first setup of experiments the impact forces on a rigid wall with 24 load cells were measured. In the second setup the slit barrier with the net was investigated. On four main cables the anchor forces were measured. In a further setup the basal distance between the channel and lowest net was varied. To study the emptying of the basin and the dosing effect on debris flows.

Stomatal Density Influences Leaf Water and Leaf Wax D/H Values in Arabidopsis

NASA Astrophysics Data System (ADS)

Lee, H.; Feakins, S. J.; Sternberg, L. O.

2014-12-01

The hydrogen isotopic composition (δD) of plant leaf wax is a powerful tool to study the hydrology of past and present environments. The δD value of leaf waxes is known to primarily reflect the δD value of source water, modified by biological fractionations commonly summarized as the 'net or apparent' fractionation. It remains a challenge, however, to quantitatively relate the isotopic composition of the end product (wax) back to that of the precursor (water) because multiple isotope effects contributing to the net fractionation are not yet well understood. Transgenic variants have heretofore unexplored potential to isolate individual isotope effects. Here we report the first hydrogen isotopic measurements from transgenic Arabidopsis thaliana plants with calculations of leaf water enrichment, net and biosynthetic fractionation values from measured δD of plant waters and leaf wax n-alkanes. We employed transgenic Arabidopsis leaves, engineered to have different stomatal density, by differential expression of the stomatal growth hormone stomagen. Comparison of variants and wild types allow us to isolate the effects of stomatal density on leaf water and the net fractionation expressed by leaf wax biomarkers. Results show that transgenic leaves with denser pores have more enriched leaf water and leaf wax δD values than wild type and even more so than transgenic leaves with sparse stomata (difference of 10 ‰). Our findings that stomatal density controls leaf water and leaf wax δD values adds insights into the cause of variations in net fractionations between species, as well as suggesting that geological variations in stomatal density may modulate the sedimentary leaf wax δD record. In nature, stomatal density varies between species and environments, and all other factors being equal, this will contribute to variations in fractionations observed. Over geological history, lower stomatal densities occur at times of elevated pCO2; our findings predict reduced leaf water isotopic enrichment and larger net fractionations during these greenhouse conditions. Future work involving transgenic plants holds considerable potential to isolate additional factors which may influence the net fractionation between source water and leaf waxes adding to our fundamental understanding of this proxy.

Innovative methodology for intercomparison of radionuclide calibrators using short half-life in situ prepared radioactive sources

DOE Office of Scientific and Technical Information (OSTI.GOV)

Oliveira, P. A.; Santos, J. A. M., E-mail: joao.santos@ipoporto.min-saude.pt; Serviço de Física Médica do Instituto Português de Oncologia do Porto Francisco Gentil, EPE, Porto

2014-07-15

Purpose: An original radionuclide calibrator method for activity determination is presented. The method could be used for intercomparison surveys for short half-life radioactive sources used in Nuclear Medicine, such as{sup 99m}Tc or most positron emission tomography radiopharmaceuticals. Methods: By evaluation of the resulting net optical density (netOD) using a standardized scanning method of irradiated Gafchromic XRQA2 film, a comparison of the netOD measurement with a previously determined calibration curve can be made and the difference between the tested radionuclide calibrator and a radionuclide calibrator used as reference device can be calculated. To estimate the total expected measurement uncertainties, a carefulmore » analysis of the methodology, for the case of{sup 99m}Tc, was performed: reproducibility determination, scanning conditions, and possible fadeout effects. Since every factor of the activity measurement procedure can influence the final result, the method also evaluates correct syringe positioning inside the radionuclide calibrator. Results: As an alternative to using a calibrated source sent to the surveyed site, which requires a relatively long half-life of the nuclide, or sending a portable calibrated radionuclide calibrator, the proposed method uses a source preparedin situ. An indirect activity determination is achieved by the irradiation of a radiochromic film using {sup 99m}Tc under strictly controlled conditions, and cumulated activity calculation from the initial activity and total irradiation time. The irradiated Gafchromic film and the irradiator, without the source, can then be sent to a National Metrology Institute for evaluation of the results. Conclusions: The methodology described in this paper showed to have a good potential for accurate (3%) radionuclide calibrators intercomparison studies for{sup 99m}Tc between Nuclear Medicine centers without source transfer and can easily be adapted to other short half-life radionuclides.« less

Gross changes in forest area shape the future carbon balance of tropical forests

NASA Astrophysics Data System (ADS)

Li, Wei; Ciais, Philippe; Yue, Chao; Gasser, Thomas; Peng, Shushi; Bastos, Ana

2018-01-01

Bookkeeping models are used to estimate land-use and land-cover change (LULCC) carbon fluxes (ELULCC). The uncertainty of bookkeeping models partly arises from data used to define response curves (usually from local data) and their representativeness for application to large regions. Here, we compare biomass recovery curves derived from a recent synthesis of secondary forest plots in Latin America by Poorter et al. (2016) with the curves used previously in bookkeeping models from Houghton (1999) and Hansis et al. (2015). We find that the two latter models overestimate the long-term (100 years) vegetation carbon density of secondary forest by about 25 %. We also use idealized LULCC scenarios combined with these three different response curves to demonstrate the importance of considering gross forest area changes instead of net forest area changes for estimating regional ELULCC. In the illustrative case of a net gain in forest area composed of a large gross loss and a large gross gain occurring during a single year, the initial gross loss has an important legacy effect on ELULCC so that the system can be a net source of CO2 to the atmosphere long after the initial forest area change. We show the existence of critical values of the ratio of gross area change over net area change (γAnetAgross), above which cumulative ELULCC is a net CO2 source rather than a sink for a given time horizon after the initial perturbation. These theoretical critical ratio values derived from simulations of a bookkeeping model are compared with observations from the 30 m resolution Landsat Thematic Mapper data of gross and net forest area change in the Amazon. This allows us to diagnose areas in which current forest gains with a large land turnover will still result in LULCC carbon emissions in 20, 50 and 100 years.

Pen rearing and imprinting of fall Chinook salmon. Annual report 1989

USGS Publications Warehouse

Beeman, J.W.; Novotny, J.F.

1990-01-01

The goal of this project is to compare net-pen rearing methods to traditional hatchery methods of rearing upriver bright fall chinook salmon (Oncorhvnchus tshawvtscha). Fish were reared at several densities in net pens at three Columbia River backwater sites during 1984-1987, and in a barrier net at one site during 1984-1986; methods included both fed and unfed treatments. The purpose of this report is to summarize the results obtained from the unfed treatments and the current return of adults from all fed treatments and the barrier net. Zooplankton were the primary food item of unfed fish. Fish reared in net pens utilized insects colonizing the nets as an additional food source, whereas those reared in the barrier net did not. Growth and production of fish reared in the unfed treatments were low. Instantaneous growth rates of unfed fish were much lower than those of the fed treatments and hatchery controls except when zooplankton densities were high and chironomid larvae were important in the diet of unfed fish reared in pens. Only fish in the barrier net treatment resulted in consistent net gains in growth and production over the rearing periods. Adult returns of fish from all fed and unfed treatments are lower than those of control fish reared at the hatchery. Returns appear to be inversely related to rearing density. Even though adult returns are lower than those of traditional hatchery methods, a cost-benefit analysis, as return data becomes more complete, may prove these methods to be an economical means of expanding current hatchery production, particularly if "thinning" releases were used.

Measures of net oxidant concentration in seawater

NASA Astrophysics Data System (ADS)

Jackson, George A.; Williams, Peter M.

1988-02-01

Dissolved oxygen deficits in the ocean have been used as a measure of the organic matter oxidized in a volume of water. Such organic matter is usually assumed to be predominantly settled particles. Using dissolved oxygen concentration in this way has two problems: first, it does not differentiate between oxidant consumed by the pool of dissolved organic matter present near the ocean surface and oxidant consumed by organic matter contained by falling particles; second, it does not account for other oxidant sources, such as nitrate, which can be as important to organic matter decay as oxygen in low-oxygen water, such as off Peru or in the Southern California submarine basins. New parameters provide better measures of the net oxidant concentration in a water parcel. One such, NetOx, is changed only by gaseous exchange with the atmosphere, exchange with the benthos, or the production or consumption of sinking particles. A simplified version of NetOx, NetOx = [O2] + 1.25[NO3-] - [TOC], where TOC (total organic carbon), the dissolved organic carbon (DOC) plus the suspended particulate organic carbon (POC), provides an index based on the usually dominant variables. Calculation of NetOx and a second property, NetOC ([O2] - [TOC]), for data from GEOSECS and ourselves in the Atlantic and Pacific oceans using property-property graphs show differences from those from oxygen deficits alone. Comparison of NetOx and NetOC concentrations at high and low latitudes of the Pacific Ocean shows the difference in surface water oxidant concentrations is even larger than the difference in oxygen concentration. Vertical particle fluxes off Peru calculated from NetOx gradients are much greater than those calculated from oxygen gradients. The potential value of NetOx and NetOC as parameters to understand particle fluxes implies that determination of TOC should be a routine part of hydrographic measurements.

Carbon balance of a grazed grassland in Belgium

NASA Astrophysics Data System (ADS)

Jérôme, E.; Beckers, Y.; Bodson, B.; Moureaux, C.; Aubinet, M.

2012-04-01

This work seeks to analyze the C balance of a Belgian grassland grazed by the "Blanc Bleu Belge" breed of cattle. The site is located at Dorinne in the Belgian Condroz (50° 18' 44" N; 4° 58' 07" E; 248 m asl.). It is permanent grassland of ca. 4.2 ha with a moderate slope of 1 to 2 %. Homogeneity and topography criteria are met to ensure high quality turbulent flux measurements. The experimental field was equipped with an eddy covariance system. Flux correction, quality control and data gap filling were performed following standardised procedures. This device was completed by a micrometeorological station that measured temperature and humidity respectively in the air and within the soil, radiation, atmospheric pressure and precipitations. Carbon exported through mowing (CNBP,export), imported through compost application (CNBP,import) or through complementary feeds for cattle (CNBP,complement) was also measured. In addition, the vegetation development was followed in order to estimate herbage production and dry matter intake by grazing animals. Carbon lost through CH4 emissions (CNBP,CH4) was finally estimated, allowing the establishment of a full C budget. After one year of measurements (May 2010 - May 2011), the grassland was a net CO2 source (Net Ecosystem Exchange (NEE) = 172 ± 94 g C m-2 year-1). Net Biome Productivity (NBP) was calculated from NEE by taking into account imports and export of organic C and losses of carbon as CH4. Contribution of CNBP,CH4to NBP was small as it was 12 ± 1 g C m-2 year-1. The balance between CNBP,import and CNBP,export created not such a large departure of NBP from NEE, which is not the case of CNBP,complement. The NBP was finally estimated at 102 ± 95 g C m-2 year-1. At this stage, it is premature to conclude about the sink or source behaviour of the plot because the NBP value is very close to its uncertainty. Moreover, this result was obtained under particular climate conditions, characterised by drought during summer 2010 and spring 2011. First year full carbon budget will be discussed in relation with climate conditions and management practices. A second year of measurements will be also presented. Key words: grassland, carbon budget, carbon dioxide exchange, eddy covariance

Implications of Uncertainty in Fossil Fuel Emissions for Terrestrial Ecosystem Modeling

NASA Astrophysics Data System (ADS)

King, A. W.; Ricciuto, D. M.; Mao, J.; Andres, R. J.

2017-12-01

Given observations of the increase in atmospheric CO2, estimates of anthropogenic emissions and models of oceanic CO2 uptake, one can estimate net global CO2 exchange between the atmosphere and terrestrial ecosystems as the residual of the balanced global carbon budget. Estimates from the Global Carbon Project 2016 show that terrestrial ecosystems are a growing sink for atmospheric CO2 (averaging 2.12 Gt C y-1 for the period 1959-2015 with a growth rate of 0.03 Gt C y-1 per year) but with considerable year-to-year variability (standard deviation of 1.07 Gt C y-1). Within the uncertainty of the observations, emissions estimates and ocean modeling, this residual calculation is a robust estimate of a global terrestrial sink for CO2. A task of terrestrial ecosystem science is to explain the trend and variability in this estimate. However, "within the uncertainty" is an important caveat. The uncertainty (2σ; 95% confidence interval) in fossil fuel emissions is 8.4% (±0.8 Gt C in 2015). Combined with uncertainty in other carbon budget components, the 2σ uncertainty surrounding the global net terrestrial ecosystem CO2 exchange is ±1.6 Gt C y-1. Ignoring the uncertainty, the estimate of a general terrestrial sink includes 2 years (1987 and 1998) in which terrestrial ecosystems are a small source of CO2 to the atmosphere. However, with 2σ uncertainty, terrestrial ecosystems may have been a source in as many as 18 years. We examine how well global terrestrial biosphere models simulate the trend and interannual variability of the global-budget estimate of the terrestrial sink within the context of this uncertainty (e.g., which models fall outside the 2σ uncertainty and in what years). Models are generally capable of reproducing the trend in net terrestrial exchange, but are less able to capture interannual variability and often fall outside the 2σ uncertainty. The trend in the residual carbon budget estimate is primarily associated with the increase in atmospheric CO2, while interannual variation is related to variations in global land-surface temperature with weaker sinks in warmer years. We examine whether these relationships are reproduced in models. Their absence might explain weaknesses in model simulations or in the reconstruction of historical climate used as drivers in model intercomparison projects (MIPs).

Controls of Carbon Exchange in a Boreal Minerogenic Mire

NASA Astrophysics Data System (ADS)

Nilsson, M.; Sagerfors, J.; Buffam, I.; Eriksson, T.; Grelle, A.; Klemedtsson, L.; Weslien, P.; Laudon, H.; Lindroth, A.

2008-12-01

Based on theories on both mire development and their response to environmental change, the current role of mires as a net carbon sink has been questioned. A rigorous evaluation of the contemporary net C-exchange in mires requires direct measurements of all relevant fluxes. We use data on carbon exchange from a boreal minerogenic oligotrophic mire (Degerö Stormyr, 64°11' N, 19°33E) to derive a contemporary carbon budget and to analyze the main controls on the C exchange. Data on the following fluxes were collected: land-atmosphere CO2 (continuous Eddy Covariance measurements, 7 years) and CH4 (static chambers during the snow free period, 4 years) exchange; DOC in precipitation; loss of TOC, CO2 and CH4 through water runoff, 4 years (continuous discharge measurement and regular C-content measurements). The annual land atmosphere exchange of CO2 (NEE) was fairly constant between years and varied between -48 - -61 gCm-2yr-1 during six out of the seven years, despite a large variation in weather combinations, the average being -53 ± 5 gCm-2yr-1. Of the net fixation of atmospheric CO2-C during the net uptake period, i.e. the growing season, approximately a third was lost during the net source period, i.e. the winter period. During the four years with measurements of methane and runoff C-export another third of the growing season uptake was lost from the mire ecosystem as methane and runoff C. While the balance between the length of the NEE uptake and the NEE loss period are most important for the annual net ecosystem carbon balance (NECB) it is central to understand the controls of the spring-summer, and the summer-autumn transitions. The onset of the net C uptake period was controlled by the interaction between the water content and the temperature of the peat moss surface. We interpret this as mainly being a control of the CO2 photosynthesis uptake by the Sphagnum mosses. The transition from being a net C sink to being a net C source is in contrast only controlled by the soil temperature. The higher the soil temperature during the months preceding the transition the earlier the mire will shift from being a C sink to become a C source. Our interpretation is that this transition is mainly controlled by the activity of the heterotrophic microorganisms. During a year with exceptional dry late summer the NEE dropped to -17 gCm-2yr-1, compared to -53±5 gCm- 2yr-1 during "normal" years. During this period the water table level was approximately 15 cm below the long-term lowest level. Data indicate that most of the reduction in NEE comes from decreased GPP while the ecosystem respiration was relatively stable between years. Including all component fluxes the mire still is a sink of atmospheric C during average weather conditions. During the years 2004 and 2005 the Net Ecosystem Balance (NECB) was -20±3.3 gCm-2yr-1. Both emission of methane and runoff export of carbon contributed significantly to the loss of carbon. During the dry year with a NEE of -17 gCm-2yr-1 the methane emission and runoff C export resulted in a NECB not different from 0.

SkyNet: A Modular Nuclear Reaction Network Library

NASA Astrophysics Data System (ADS)

Lippuner, Jonas; Roberts, Luke F.

2017-12-01

Almost all of the elements heavier than hydrogen that are present in our solar system were produced by nuclear burning processes either in the early universe or at some point in the life cycle of stars. In all of these environments, there are dozens to thousands of nuclear species that interact with each other to produce successively heavier elements. In this paper, we present SkyNet, a new general-purpose nuclear reaction network that evolves the abundances of nuclear species under the influence of nuclear reactions. SkyNet can be used to compute the nucleosynthesis evolution in all astrophysical scenarios where nucleosynthesis occurs. SkyNet is free and open source, and aims to be easy to use and flexible. Any list of isotopes can be evolved, and SkyNet supports different types of nuclear reactions. SkyNet is modular so that new or existing physics, like nuclear reactions or equations of state, can easily be added or modified. Here, we present in detail the physics implemented in SkyNet with a focus on a self-consistent transition to and from nuclear statistical equilibrium to non-equilibrium nuclear burning, our implementation of electron screening, and coupling of the network to an equation of state. We also present comprehensive code tests and comparisons with existing nuclear reaction networks. We find that SkyNet agrees with published results and other codes to an accuracy of a few percent. Discrepancies, where they exist, can be traced to differences in the physics implementations.

Migration and risk: net migration in marginal ecosystems and hazardous areas

NASA Astrophysics Data System (ADS)

de Sherbinin, Alex; Levy, Marc; Adamo, Susana; MacManus, Kytt; Yetman, Greg; Mara, Valentina; Razafindrazay, Liana; Goodrich, Benjamin; Srebotnjak, Tanja; Aichele, Cody; Pistolesi, Linda

2012-12-01

The potential for altered ecosystems and extreme weather events in the context of climate change has raised questions concerning the role that migration plays in either increasing or reducing risks to society. Using modeled data on net migration over three decades from 1970 to 2000, we identify sensitive ecosystems and regions at high risk of climate hazards that have seen high levels of net in-migration and out-migration over the time period. This paper provides a literature review on migration related to ecosystems, briefly describes the methodology used to develop the estimates of net migration, then uses those data to describe the patterns of net migration for various ecosystems and high risk regions. The study finds that negative net migration generally occurs over large areas, reflecting its largely rural character, whereas areas of positive net migration are typically smaller, reflecting its largely urban character. The countries with largest population such as China and India tend to drive global results for all the ecosystems found in those countries. Results suggest that from 1970 to 2000, migrants in developing countries have tended to move out of marginal dryland and mountain ecosystems and out of drought-prone areas, and have moved towards coastal ecosystems and areas that are prone to floods and cyclones. For North America results are reversed for dryland and mountain ecosystems, which saw large net influxes of population in the period of record. Uncertainties and potential sources of error in these estimates are addressed.

Past and future of GHG observations in Africa

NASA Astrophysics Data System (ADS)

Bombelli, A.; Valentini, R.; Battipaglia, G.; Chiti, T.; Nicolini, G.; Santini, M.; Vaglio Laurin, G.; Castaldi, S.

2015-12-01

Through the projects CarboAfrica before (2006-2010) and Africa-GHG afterwards (2010-2014) the authors have contributed to the development of a flux monitoring network in Sub-Saharan Africa and studied the Africa's GHG budget using different integrated approaches.The first GHG flux observatory in an African tropical rainforest was established, based on a 60m eddy covariance flux tower in the Ankasa Conservation Area, Ghana. CO2, water and energy fluxes, as well as atmospheric concentrations of gaseous N compounds and aerosols, were measured continuously throughout the year. Field campaigns were carried out during the wet and dry season to measure CH4 and N2O fluxes. The results showed that the tropical forest was acting as C-sink (6-8 MgC ha-1 yr-1).Other measurements and results concerned: the role of CO2 fertilization by analyzing wood growth rings of long-lived trees, with the longest (≈ 400 years) chronology for tropical forests; 14C measurements of soil organic matter age and turnover, showing the critical role that soil may have on the net organic C accumulation in tropical forests; the role of soil as CH4 source even in forests not visibly flooded; the role of tropical forests as natural source of N2O; the application of advanced remote sensing techniques, such as discrete and wave forms LiDAR, to assess tropical forests biomass and biodiversity. All these data were combined with other modeling and observing efforts to reassess the African continent GHG budget. The results showed that Africa is a small sink of carbon (-0.61±0.58 PgC yr-1), but the emissions of CH4 and N2O turn it into a net source of radiative forcing in CO2 equivalent terms. Uncertainties however are still very high. In order to constrain such uncertainty it is of paramount importance to increase the density of observations in space and time so to cover the complex and dynamic temporal and spatial variability of African ecosystems.

Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks.

PubMed

Adalsteinsson, David; McMillen, David; Elston, Timothy C

2004-03-08

Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true for pathways that involve transcriptional regulation, where generally there are two copies of each gene and the number of messenger RNA (mRNA) molecules can be small. Therefore, there is a need for computational tools for developing and investigating stochastic models of biochemical networks. We have developed the software package Biochemical Network Stochastic Simulator (BioNetS) for efficiently and accurately simulating stochastic models of biochemical networks. BioNetS has a graphical user interface that allows models to be entered in a straightforward manner, and allows the user to specify the type of random variable (discrete or continuous) for each chemical species in the network. The discrete variables are simulated using an efficient implementation of the Gillespie algorithm. For the continuous random variables, BioNetS constructs and numerically solves the appropriate chemical Langevin equations. The software package has been developed to scale efficiently with network size, thereby allowing large systems to be studied. BioNetS runs as a BioSpice agent and can be downloaded from http://www.biospice.org. BioNetS also can be run as a stand alone package. All the required files are accessible from http://x.amath.unc.edu/BioNetS. We have developed BioNetS to be a reliable tool for studying the stochastic dynamics of large biochemical networks. Important features of BioNetS are its ability to handle hybrid models that consist of both continuous and discrete random variables and its ability to model cell growth and division. We have verified the accuracy and efficiency of the numerical methods by considering several test systems.

ICU early physical rehabilitation programs: financial modeling of cost savings.

PubMed

Lord, Robert K; Mayhew, Christopher R; Korupolu, Radha; Mantheiy, Earl C; Friedman, Michael A; Palmer, Jeffrey B; Needham, Dale M

2013-03-01

To evaluate the potential annual net cost savings of implementing an ICU early rehabilitation program. Using data from existing publications and actual experience with an early rehabilitation program in the Johns Hopkins Hospital Medical ICU, we developed a model of net financial savings/costs and presented results for ICUs with 200, 600, 900, and 2,000 annual admissions, accounting for both conservative- and best-case scenarios. Our example scenario provided a projected financial analysis of the Johns Hopkins Medical ICU early rehabilitation program, with 900 admissions per year, using actual reductions in length of stay achieved by this program. U.S.-based adult ICUs. Financial modeling of the introduction of an ICU early rehabilitation program. Net cost savings generated in our example scenario, with 900 annual admissions and actual length of stay reductions of 22% and 19% for the ICU and floor, respectively, were $817,836. Sensitivity analyses, which used conservative- and best-case scenarios for length of stay reductions and varied the per-day ICU and floor costs, across ICUs with 200-2,000 annual admissions, yielded financial projections ranging from -$87,611 (net cost) to $3,763,149 (net savings). Of the 24 scenarios included in these sensitivity analyses, 20 (83%) demonstrated net savings, with a relatively small net cost occurring in the remaining four scenarios, mostly when simultaneously combining the most conservative assumptions. A financial model, based on actual experience and published data, projects that investment in an ICU early rehabilitation program can generate net financial savings for U.S. hospitals. Even under the most conservative assumptions, the projected net cost of implementing such a program is modest relative to the substantial improvements in patient outcomes demonstrated by ICU early rehabilitation programs.

PulseNet China, a model for future laboratory-based bacterial infectious disease surveillance in China.

PubMed

Li, Wei; Lu, Shan; Cui, Zhigang; Cui, Jinghua; Zhou, Haijian; Wang, Yiqing; Shao, Zhujun; Ye, Changyun; Kan, Biao; Xu, Jianguo

2012-12-01

Surveillance is critical for the prevention and control of infectious disease. China's real-time web-based infectious disease reporting system is a distinguished achievement. However, many aspects of the current China Infectious Disease Surveillance System do not yet meet the demand for timely outbreak detection and identification of emerging infectious disease. PulseNet, the national molecular typing network for foodborne disease surveillance was first established by the Centers for Disease Control and Prevention of the United States in 1995 and has proven valuable in the early detection of outbreaks and tracing the pathogen source. Since 2001, the China CDC laboratory for bacterial pathogen analysis has been a member of the PulseNet International family; and has been adapting the idea and methodology of PulseNet to develop a model for a future national laboratory-based surveillance system for all bacterial infectious disease.We summarized the development progress for the PulseNet China system and discussed it as a model for the future of China's national laboratory-based surveillance system.

Orbit Determination of KOMPSAT-1 and Cryosat-2 Satellites Using Optical Wide-field Patrol Network (OWL-Net) Data with Batch Least Squares Filter

NASA Astrophysics Data System (ADS)

Lee, Eunji; Park, Sang-Young; Shin, Bumjoon; Cho, Sungki; Choi, Eun-Jung; Jo, Junghyun; Park, Jang-Hyun

2017-03-01

The optical wide-field patrol network (OWL-Net) is a Korean optical surveillance system that tracks and monitors domestic satellites. In this study, a batch least squares algorithm was developed for optical measurements and verified by Monte Carlo simulation and covariance analysis. Potential error sources of OWL-Net, such as noise, bias, and clock errors, were analyzed. There is a linear relation between the estimation accuracy and the noise level, and the accuracy significantly depends on the declination bias. In addition, the time-tagging error significantly degrades the observation accuracy, while the time-synchronization offset corresponds to the orbital motion. The Cartesian state vector and measurement bias were determined using the OWL-Net tracking data of the KOMPSAT-1 and Cryosat-2 satellites. The comparison with known orbital information based on two-line elements (TLE) and the consolidated prediction format (CPF) shows that the orbit determination accuracy is similar to that of TLE. Furthermore, the precision and accuracy of OWL-Net observation data were determined to be tens of arcsec and sub-degree level, respectively.

Ambient Noise Green's Function Simulation of Long-Period Ground Motions for Reverse Faulting

NASA Astrophysics Data System (ADS)

Miyake, H.; Beroza, G. C.

2009-12-01

Long-time correlation of ambient seismic noise has been demonstrated as a useful tool for strong ground motion prediction [Prieto and Beroza, 2008]. An important advantage of ambient noise Green's functions is that they can be used for ground motion simulation without resorting to either complex 3-D velocity structure to develop theoretical Green’s functions, or aftershock records for empirical Green’s function analysis. The station-to-station approach inherent to ambient noise Green’s functions imposes some limits to its application, since they are band-limited, applied at the surface, and for a single force. We explore the applicability of this method to strong motion prediction using the 2007 Chuetsu-oki, Japan, earthquake (Mw 6.6, depth = 9 km), which excited long-period ground motions in and around the Kanto basin almost 200 km from the epicenter. We test the performance of ambient noise Green's function for long-period ground motion simulation. We use three components of F-net broadband data at KZK station, which is located near the source region, as a virtual source, and three components of six F-net stations in and around the Kanto basin to calculate the response. An advantage to applying this approach in Japan is that ambient-noise sources are active in diverse directions. The dominant period of the ambient noise for the F-net datasets is mostly 7 s over the year, and amplitudes are largest in winter. This period matches the dominant periods of the Kanto and Niigata basins. For the 9 components of the ambient noise Green’s functions, we have confirmed long-period components corresponding to Love wave and Rayleigh waves that can be used for simulation of the 2007 Chuetsu-oki earthquake. The relative amplitudes, phases, and durations of the ambient noise Green’s functions at the F-net stations in and around the Kanto basin respect to F-net KZK station are fairly well matched with those of the observed ground motions for the 2007 Chuetsu-oki earthquake.

Global Surface Net-Radiation at 5 km from MODIS Terra

DOE Office of Scientific and Technical Information (OSTI.GOV)

Verma, Manish; Fisher, Joshua; Mallick, Kaniska

Reliable and fine resolution estimates of surface net-radiation are required for estimating latent and sensible heat fluxes between the land surface and the atmosphere. However, currently, fine resolution estimates of net-radiation are not available and consequently it is challenging to develop multi-year estimates of evapotranspiration at scales that can capture land surface heterogeneity and are relevant for policy and decision-making. We developed and evaluated a global net-radiation product at 5 km and 8-day resolution by combining mutually consistent atmosphere and land data from the Moderate Resolution Imaging Spectroradiometer (MODIS) on board Terra. Comparison with net-radiation measurements from 154 globally distributedmore » sites (414 site-years) from the FLUXNET and Surface Radiation budget network (SURFRAD) showed that the net-radiation product agreed well with measurements across seasons and climate types in the extratropics (Wilmott's index ranged from 0.74 for boreal to 0.63 for Mediterranean sites). Mean absolute deviation between the MODIS and measured net-radiation ranged from 38.0 ± 1.8 W.m -2 in boreal to 72.0 ± 4.1 W.m -2 in the tropical climates. The mean bias was small and constituted only 11%, 0.7%, 8.4%, 4.2%, 13.3%, and 5.4% of the mean absolute error in daytime net-radiation in boreal, Mediterranean, temperate-continental, temperate, semi-arid, and tropical climate, respectively. To assess the accuracy of the broader spatiotemporal patterns, we upscaled error-quantified MODIS net-radiation and compared it with the net-radiation estimates from the coarse spatial (1° x 1°) but high temporal resolution gridded net-radiation product from the Clouds and Earth's Radiant Energy System (CERES). Our estimates agreed closely with the net-radiation estimates from the CERES. Difference between the two was less than 10W.m -2 in 94% of the total land area. MODIS net-radiation product will be a valuable resource for the science community studying turbulent fluxes and energy budget at the Earth's surface.« less

Global Surface Net-Radiation at 5 km from MODIS Terra

DOE PAGES

Verma, Manish; Fisher, Joshua; Mallick, Kaniska; ...

2016-09-06

Reliable and fine resolution estimates of surface net-radiation are required for estimating latent and sensible heat fluxes between the land surface and the atmosphere. However, currently, fine resolution estimates of net-radiation are not available and consequently it is challenging to develop multi-year estimates of evapotranspiration at scales that can capture land surface heterogeneity and are relevant for policy and decision-making. We developed and evaluated a global net-radiation product at 5 km and 8-day resolution by combining mutually consistent atmosphere and land data from the Moderate Resolution Imaging Spectroradiometer (MODIS) on board Terra. Comparison with net-radiation measurements from 154 globally distributedmore » sites (414 site-years) from the FLUXNET and Surface Radiation budget network (SURFRAD) showed that the net-radiation product agreed well with measurements across seasons and climate types in the extratropics (Wilmott's index ranged from 0.74 for boreal to 0.63 for Mediterranean sites). Mean absolute deviation between the MODIS and measured net-radiation ranged from 38.0 ± 1.8 W.m -2 in boreal to 72.0 ± 4.1 W.m -2 in the tropical climates. The mean bias was small and constituted only 11%, 0.7%, 8.4%, 4.2%, 13.3%, and 5.4% of the mean absolute error in daytime net-radiation in boreal, Mediterranean, temperate-continental, temperate, semi-arid, and tropical climate, respectively. To assess the accuracy of the broader spatiotemporal patterns, we upscaled error-quantified MODIS net-radiation and compared it with the net-radiation estimates from the coarse spatial (1° x 1°) but high temporal resolution gridded net-radiation product from the Clouds and Earth's Radiant Energy System (CERES). Our estimates agreed closely with the net-radiation estimates from the CERES. Difference between the two was less than 10W.m -2 in 94% of the total land area. MODIS net-radiation product will be a valuable resource for the science community studying turbulent fluxes and energy budget at the Earth's surface.« less

Spatio-temporal distribution of energy radiation from low frequency tremor

NASA Astrophysics Data System (ADS)

Maeda, T.; Obara, K.

2007-12-01

Recent fine-scale hypocenter locations of low frequency tremors (LFTs) estimated by cross-correlation technique (Shelly et al. 2006; Maeda et al. 2006) and new finding of very low frequency earthquake (Ito et al. 2007) suggest that these slow events occur at the plate boundary associated with slow slip events (Obara and Hirose, 2006). However, the number of tremor detected by above technique is limited since continuous tremor waveforms are too complicated. Although an envelope correlation method (ECM) (Obara, 2002) enables us to locate epicenters of LFT without arrival time picks, however, ECM fails to locate LFTs precisely especially on the most active stage of tremor activity because of the low-correlation of envelope amplitude. To reveal total energy release of LFT, here we propose a new method for estimating the location of LFTs together with radiated energy from the tremor source by using envelope amplitude. The tremor amplitude observed at NIED Hi-net stations in western Shikoku simply decays in proportion to the reciprocal of the source-receiver distance after the correction of site- amplification factor even though the phases of the tremor are very complicated. So, we model the observed mean square envelope amplitude by time-dependent energy radiation with geometrical spreading factor. In the model, we do not have origin time of the tremor since we assume that the source of the tremor continuously radiates the energy. Travel-time differences between stations estimated by the ECM technique also incorporated in our locating algorithm together with the amplitude information. Three-component 1-hour Hi-net velocity continuous waveforms with a pass-band of 2-10 Hz are used for the inversion after the correction of site amplification factors at each station estimated by coda normalization method (Takahashi et al. 2005) applied to normal earthquakes in the region. The source location and energy are estimated by applying least square inversion to the 1-min window iteratively. As a first application of our method, we estimated the spatio-temporal distribution of energy radiation for 2006 May episodic tremor and slip event occurred in western Shikoku, Japan, region. Tremor location and their radiated energy are estimated for every 1 minute. We counted the number of located LFTs and summed up their total energy at each grid having 0.05-degree spacing at each day to figure out the spatio-temporal distribution of energy release of tremors. The resultant spatial distribution of radiated energy is concentrated at a specific region. Additionally, we see the daily change of released energy, both of location and amount, which corresponds to the migration of tremor activity. The spatio-temporal distribution of energy radiation of tremors is in good agreement with a spatio-temporal slip distribution of slow slip event estimated from Hi-net tiltmeter record (Hirose et al. 2007). This suggests that small continuous tremors occur associated with a rupture process of slow slip.

MetaNET--a web-accessible interactive platform for biological metabolic network analysis.

PubMed

Narang, Pankaj; Khan, Shawez; Hemrom, Anmol Jaywant; Lynn, Andrew Michael

2014-01-01

Metabolic reactions have been extensively studied and compiled over the last century. These have provided a theoretical base to implement models, simulations of which are used to identify drug targets and optimize metabolic throughput at a systemic level. While tools for the perturbation of metabolic networks are available, their applications are limited and restricted as they require varied dependencies and often a commercial platform for full functionality. We have developed MetaNET, an open source user-friendly platform-independent and web-accessible resource consisting of several pre-defined workflows for metabolic network analysis. MetaNET is a web-accessible platform that incorporates a range of functions which can be combined to produce different simulations related to metabolic networks. These include (i) optimization of an objective function for wild type strain, gene/catalyst/reaction knock-out/knock-down analysis using flux balance analysis. (ii) flux variability analysis (iii) chemical species participation (iv) cycles and extreme paths identification and (v) choke point reaction analysis to facilitate identification of potential drug targets. The platform is built using custom scripts along with the open-source Galaxy workflow and Systems Biology Research Tool as components. Pre-defined workflows are available for common processes, and an exhaustive list of over 50 functions are provided for user defined workflows. MetaNET, available at http://metanet.osdd.net , provides a user-friendly rich interface allowing the analysis of genome-scale metabolic networks under various genetic and environmental conditions. The framework permits the storage of previous results, the ability to repeat analysis and share results with other users over the internet as well as run different tools simultaneously using pre-defined workflows, and user-created custom workflows.

Global and regional fluxes of carbon from land use and land cover change 1850-2015

NASA Astrophysics Data System (ADS)

Houghton, R. A.; Nassikas, Alexander A.

2017-03-01

The net flux of carbon from land use and land cover change (LULCC) is an important term in the global carbon balance. Here we report a new estimate of annual fluxes from 1850 to 2015, updating earlier analyses with new estimates of both historical and current rates of LULCC and including emissions from draining and burning of peatlands in Southeast Asia. For most of the 186 countries included we relied on data from Food and Agriculture Organization to document changes in the areas of croplands and pastures since 1960 and changes in the areas of forests and "other land" since 1990. For earlier years we used other sources of information. We used a bookkeeping model that prescribed changes in carbon density of vegetation and soils for 20 types of ecosystems and five land uses. The total net flux attributable to LULCC over the period 1850-2015 is calculated to have been 145 ± 16 Pg C (1 standard deviation). Most of the emissions were from the tropics (102 ± 5.8 Pg C), generally increasing over time to a maximum of 2.10 Pg C yr-1 in 1997. Outside the tropics emissions were roughly constant at 0.5 Pg C yr-1 until 1940, declined to zero around 1970, and then became negative. For the most recent decade (2006-2015) global net emissions from LULCC averaged 1.11 (±0.35) Pg C yr-1, consisting of a net source from the tropics (1.41 ± 0.17 Pg C yr-1), a net sink in northern midlatitudes (-0.28 ± 0.21 Pg C yr-1), and carbon neutrality in southern midlatitudes.

OpenClimateGIS - A Web Service Providing Climate Model Data in Commonly Used Geospatial Formats

NASA Astrophysics Data System (ADS)

Erickson, T. A.; Koziol, B. W.; Rood, R. B.

2011-12-01

The goal of the OpenClimateGIS project is to make climate model datasets readily available in commonly used, modern geospatial formats used by GIS software, browser-based mapping tools, and virtual globes.The climate modeling community typically stores climate data in multidimensional gridded formats capable of efficiently storing large volumes of data (such as netCDF, grib) while the geospatial community typically uses flexible vector and raster formats that are capable of storing small volumes of data (relative to the multidimensional gridded formats). OpenClimateGIS seeks to address this difference in data formats by clipping climate data to user-specified vector geometries (i.e. areas of interest) and translating the gridded data on-the-fly into multiple vector formats. The OpenClimateGIS system does not store climate data archives locally, but rather works in conjunction with external climate archives that expose climate data via the OPeNDAP protocol. OpenClimateGIS provides a RESTful API web service for accessing climate data resources via HTTP, allowing a wide range of applications to access the climate data.The OpenClimateGIS system has been developed using open source development practices and the source code is publicly available. The project integrates libraries from several other open source projects (including Django, PostGIS, numpy, Shapely, and netcdf4-python).OpenClimateGIS development is supported by a grant from NOAA's Climate Program Office.

Quantifying terrestrial ecosystem carbon dynamics in the Jinsha watershed, Upper Yangtze, China from 1975 to 2000

USGS Publications Warehouse

Zhao, Shuqing; Liu, Shuguang; Yin, Runsheng; Li, Zhengpeng; Deng, Yulin; Tan, Kun; Deng, Xiangzheng; Rothstein, David; Qi, Jiaguo; Yin, Runsheng

2009-01-01

Quantifying the spatial and temporal dynamics of carbon stocks in terrestrial ecosystems and carbon fluxes between the terrestrial biosphere and the atmosphere is critical to our understanding of regional patterns of carbon storage and loss. Here we use the General Ensemble Biogeochemical Modeling System to simulate the terrestrial ecosystem carbon dynamics in the Jinsha watershed of China's upper Yangtze basin from 1975 to 2000, based on unique combinations of spatial and temporal dynamics of major driving forces, such as climate, soil properties, nitrogen deposition, and land use and land cover changes. Our analysis demonstrates that the Jinsha watershed ecosystems acted as a carbon sink during the period of 1975–2000, with an average rate of 0.36 Mg/ha/yr, primarily resulting from regional climate variation and local land use and land cover change. Vegetation biomass accumulation accounted for 90.6% of the sink, while soil organic carbon loss before 1992 led to lower net gain of carbon in the watershed, and after that soils became a small sink. Ecosystem carbon sinks/source pattern showed a high degree of spatial heterogeneity, Carbon sinks were associated with forest areas without disturbances, whereas carbon Sources were primarily caused by stand-replacing disturbances. This highlights the importance of land-use history in determining the regional carbon sinks/source pattern.

Estuarine Habitat and Juvenile Salmon: Current and Historical Linkages in the Lower Columbia River and Estuary

DTIC Science & Technology

2011-12-01

composition with a trap net adapted from the design of Gray et al . ( 2002 ). Each trap net consisted of two wings extending from opposite banks of the channel...histories of source populations (Simenstad and Cordell 2000; Bottom et al . 2005b). Our 2002 -2008 survey results provided empirical data to support this...refugia from marine predators (Simenstad et al . 1982; Healey 1991; Thorpe 1994). Yet surprisingly few studies have examined the estuarine habitat