Impacts of the 2011 Tsunami on Sediment Characteristics and Macrozoobenthic Assemblages in a Shallow Eutrophic Lagoon, Sendai Bay, Japan.

PubMed

Kanaya, Gen; Suzuki, Takao; Kikuchi, Eisuke

2015-01-01

A huge tsunami is one of the greatest disturbance events in coastal benthic communities, although the ecological consequences are not fully understood. Here we examined the tsunami-induced changes in the sediment environment and macrozoobenthic assemblage in a eutrophic brackish lagoon in eastern Japan. The 7.2-m-high tsunami completely replaced muddy sediment with drifting sea sand throughout the lagoon, leading to the drastic changes in quantity and quality of sedimental organic matters, sulfide contents, and sediment redox condition. Intensive physical stress devastated the benthic community, but the disappearance of sulfidic muddy bottoms significantly improved the habitat quality for macrozoobenthos. The re-established macrozoobenthic community after 5 months was characterized by (1) a 2-fold higher total density, but sharp declines in species richness, diversity, and evenness; (2) an increased density of opportunistic taxa (e.g., polychaete Pseudopolydora spp. and amphipod Monocorophium uenoi) in newly created sandy bottoms; and (3) disappearance of several dominant taxa including bivalves and chironomid larvae. These findings indicate that the sensitivity and recovery potential of macrozoobenthos were highly taxa-specific, which was closely related to the taxa's ecological characteristics, including tolerance to physical disturbance, life-history traits, and life form. Our data revealed the rapid recolonization of opportunistic macrozoobenthos after a huge tsunami, which would contribute to the functional recovery of estuarine soft-bottom habitats shortly after a disturbance event.

Megabenthic assemblages in the continental shelf edge and upper slope of the Menorca Channel, Western Mediterranean Sea

NASA Astrophysics Data System (ADS)

Grinyó, Jordi; Gori, Andrea; Greenacre, Michael; Requena, Susana; Canepa, Antonio; Lo Iacono, Claudio; Ambroso, Stefano; Purroy, Ariadna; Gili, Josep-Maria

2018-03-01

Highly diverse megabenthic assemblages dominated by passive and active suspension feeders have been recently reported in shelf edge environments of the Mediterranean Sea. Due to their frequent association with species of commercial interest, these assemblages have been heavily impacted by fishing. The vulnerability and low resilience of these assemblages, composed mainly by long-living and slow-growing species, have motivated the implementation of management measures such as the restriction of bottom trawling, and the establishment of large protected areas embracing these environments. The Menorca Channel is one of such areas recently included in the European Union Natura 2000 network. Quantitative analysis of video transects recorded at 95-360 m depth by manned submersible and remotely operated vehicles were used to characterize megabenthic assemblages and to assess their geographical and bathymetric distribution. Six different assemblages were identified, mainly segregated by substrate type and depth. Hard substrates hosted coral gardens and sponge grounds, whereas soft sediments were mainly characterized by large extensions of the crinoid Leptometra phalangium and the brachiopod Gryphus vitreus. The good preservation of most of the observed assemblages is probably related to a low bottom trawling pressure, which mainly concentrates deeper on the adjacent continental slope. Because of their biological and ecological value, management and conservation measures need to be established to preserve these benthic assemblages.

Assemblages of animals around urban structures: testing hypotheses of patterns in sediments under boat-mooring pontoons.

PubMed

Lindegarth, M

2001-05-01

Assemblages of animals in soft-sediments were studied in relation to pontoons for mooring private boats in two estuaries near Sydney, Australia. Based on previously observed patterns around other types of artificial structures, it was predicted that assemblages of animals under pontoons would be different from those in similar areas away from pontoons. Hypotheses about overall differences in average abundance and composition between sites with and without pontoons were tested, as were hypotheses about variable differences among and within estuaries. Analyses revealed that there were fewer crustaceans under pontoons in one estuary. The most conspicuous patterns related to pontoons were, however, differences in variability among sites with pontoons compared to sites without pontoons. Differences in spatial variability were found for the overall multivariate structure using Bray-Curtis dissimilarities and for abundances of most major taxa. Total abundance was approximately 60 times more variable among sites without pontoons and number of taxa were seven times more variable among sites with pontoons. Such patterns indicate that impacts of pontoons occur at some sites but not at others. This may be explained by intrinsic differences among sites or by differences in practices for maintenance. Predictions from these two contrasting models need to be tested in order to achieve efficient management of this type of structure.

Impacts of the 2011 Tsunami on Sediment Characteristics and Macrozoobenthic Assemblages in a Shallow Eutrophic Lagoon, Sendai Bay, Japan

PubMed Central

Kanaya, Gen; Suzuki, Takao; Kikuchi, Eisuke

2015-01-01

A huge tsunami is one of the greatest disturbance events in coastal benthic communities, although the ecological consequences are not fully understood. Here we examined the tsunami-induced changes in the sediment environment and macrozoobenthic assemblage in a eutrophic brackish lagoon in eastern Japan. The 7.2-m-high tsunami completely replaced muddy sediment with drifting sea sand throughout the lagoon, leading to the drastic changes in quantity and quality of sedimental organic matters, sulfide contents, and sediment redox condition. Intensive physical stress devastated the benthic community, but the disappearance of sulfidic muddy bottoms significantly improved the habitat quality for macrozoobenthos. The re-established macrozoobenthic community after 5 months was characterized by (1) a 2-fold higher total density, but sharp declines in species richness, diversity, and evenness; (2) an increased density of opportunistic taxa (e.g., polychaete Pseudopolydora spp. and amphipod Monocorophium uenoi) in newly created sandy bottoms; and (3) disappearance of several dominant taxa including bivalves and chironomid larvae. These findings indicate that the sensitivity and recovery potential of macrozoobenthos were highly taxa-specific, which was closely related to the taxa’s ecological characteristics, including tolerance to physical disturbance, life-history traits, and life form. Our data revealed the rapid recolonization of opportunistic macrozoobenthos after a huge tsunami, which would contribute to the functional recovery of estuarine soft-bottom habitats shortly after a disturbance event. PMID:26241654

Fidelity of life and death molluscan assemblages from carbonate tidal flats in the Persian (Arabian) Gulf

NASA Astrophysics Data System (ADS)

García-Ramos, Diego A.; Albano, Paolo G.; Harzhauser, Mathias; Piller, Werner E.; Zuschin, Martin

2016-04-01

Live-dead (LD) studies aim to help understand how faithfully fossil assemblages can be used to quantitatively infer the structure of the original living communities that generated them. To this purpose, LD comparisons have been conducted in different terrestrial and aquatic environments to assess how environment-specific differences in quality and intensity of taphonomic factors affect LD fidelity. In sub-tropical and tropical settings, most LD studies have focused on hard substrates or seagrass bottoms. Here we present results on molluscan assemblages from soft carbonate sediments in tidal flats of the Persian (Arabian) Gulf (Indo-West Pacific biogeographic province). We analyzed a total of 7193 mollusks collected from six sites comprising time-averaged death assemblages (DAs) and snapshot living assemblages (LAs). All analyses were performed at site and at habitat scales after correcting for sample-size differences. We found a good match in proportional abundance and a notable mismatch in species composition. In fact, species richness in DAs is 6 times larger than in LAs at site scale, and 4 times at habitat scale. Additionally, we found a good fidelity of evenness, and rank abundance of feeding guilds. Other studies have shown that molluscan DAs from subtidal carbonate environments can display lower time-averaging than those from siliciclastic environments due to high rates of shell loss to bioerosion and dissolution. For our case study of tidal flat carbonate settings, we interpret that despite temporal autocorrelation (good fidelity of proportional abundance), substantial differences in species richness and composition can be explained by early cementation, lateral mixing, intense bioturbation and moderate sedimentation rates. Our results suggest that tidal flat carbonate environments can potentially lead to a wider window of time-averaging in comparison with subtidal carbonate settings.

Thriving reefs in the Baltic? Diversity and small-scale variability of hard-bottom assemblages along natural and anthropogenic gradients in the German Baltic Sea

NASA Astrophysics Data System (ADS)

Beisiegel, K.; Zettler, M. L.; Darr, A.; Schiele, K.; Schwarzer, K.; Richter, P.

2016-02-01

Since the vast majority of global seafloor habitats are characterized by soft sediments, hard substrata represent rarities hosting species and functional groups not found elsewhere. The same holds true for the enclosed and brackish Baltic Sea, where hard substrata occur patchy and infrequent. Subtidal low-relief terrains with homogenous mud and sand flats form the predominant benthic substrate and the associated infaunal communities are well described. In contrast, the diverse, primarily epibenthic assemblages on subtidal hard bottoms received far less attention. Since 2011 a team of geologists and biologists aims to map the subtidal habitats and biotopes. On joint cruises, geologists use side scan sonar to map the seafloor sediments while ground truthing is performed in collaboration with biologists. Biogenic concretions like mussel beds and hard structures of geogenic origin like stones and glacial boulders form the predominant hard substrata in the German Baltic Sea. These habitats are subsequently investigated using frame sampling by SCUBA diving, dredges or towed photo/video platforms. The type of hard substratum, salinity and light availability seem to be the most important natural factors that determine the epibenthic community composition. Identified geological substrata and biological communities are matched with biotopes of the HELCOM Underwater biotope and habitat classification system. Predictive modeling approaches are used to generate biotope specific distribution patterns, based on biological point samples, area-wide sediment distribution maps and measured/modeled environmental parameters. The resulting hard-bottom biotope maps, combining geological and biological information, complement the existing area-wide biotope map of soft sediment communities. The maps are important tools both for the scientific community to understand the functioning of marine ecosystems as well as for nature conservation, e.g. for the implementation of MPA management plans and for the development of monitoring concepts and the red list classification of biotopes.

When time affects space: Dispersal ability and extreme weather events determine metacommunity organization in marine sediments.

PubMed

Corte, Guilherme N; Gonçalves-Souza, Thiago; Checon, Helio H; Siegle, Eduardo; Coleman, Ross A; Amaral, A Cecília Z

2018-05-01

Community ecology has traditionally assumed that the distribution of species is mainly influenced by environmental processes. There is, however, growing evidence that environmental (habitat characteristics and biotic interactions) and spatial processes (factors that affect a local assemblage regardless of environmental conditions - typically related to dispersal and movement of species) interactively shape biological assemblages. A metacommunity, which is a set of local assemblages connected by dispersal of individuals, is spatial in nature and can be used as a straightforward approach for investigating the interactive and independent effects of both environmental and spatial processes. Here, we examined (i) how environmental and spatial processes affect the metacommunity organization of marine macroinvertebrates inhabiting the intertidal sediments of a biodiverse coastal ecosystem; (ii) whether the influence of these processes is constant through time or is affected by extreme weather events (storms); and (iii) whether the relative importance of these processes depends on the dispersal abilities of organisms. We found that macrobenthic assemblages are influenced by each of environmental and spatial variables; however, spatial processes exerted a stronger role. We also found that this influence changes through time and is modified by storms. Moreover, we observed that the influence of environmental and spatial processes varies according to the dispersal capabilities of organisms. More effective dispersers (i.e., species with planktonic larvae) are more affected by spatial processes whereas environmental variables had a stronger effect on weaker dispersers (i.e. species with low motility in larval and adult stages). These findings highlight that accounting for spatial processes and differences in species life histories is essential to improve our understanding of species distribution and coexistence patterns in intertidal soft-sediments. Furthermore, it shows that storms modify the structure of coastal assemblages. Given that the influence of spatial and environmental processes is not consistent through time, it is of utmost importance that future studies replicate sampling over different periods so the influence of temporal and stochastic factors on macrobenthic metacommunities can be better understood. Copyright © 2018 Elsevier Ltd. All rights reserved.

Comparing efficacy of different taxonomic resolutions and surrogates in detecting changes in soft bottom assemblages due to coastal defence structures.

PubMed

Bertasi, Fabio; Colangelo, Marina Antonia; Colosio, Francesco; Gregorio, Gianni; Abbiati, Marco; Ceccherelli, Victor Ugo

2009-05-01

Sandy shores on the West coast of the North Adriatic Sea are extensively protected by different types of defence structures to prevent coastal erosion. Coastal defence schemes modify the hydrodynamic regime, the sediment structure and composition thus affecting the benthic assemblages. This study examines the effectiveness in detecting changes in soft bottom assemblages caused by coastal defence structures by using different levels of taxonomic resolution, polychaetes and/or bivalves as surrogates and different data transformations. A synoptic analyses of three datasets of subtidal benthic macrofauna used in studies aimed at assessing the impact of breakwaters along the North Adriatic coast has been done. Analyses of similarities and correlations between distance matrices were done using matrices with different levels of taxonomic resolution, and with polychaetes or bivalves data alone. Lentidium mediterraneum was the most abundant species in all datasets. Its abundance was not consistently related to the presence of defence structures. Moreover, distribution patterns of L. mediterraneum were masking the structure of the whole macrofaunal assemblages. Removal of L. mediterraneum from the datasets allowed the detection of changes in benthic assemblages due to coastal defences. Analyses on different levels of taxonomic resolution showed that the level of family maintained sufficient information to detect the impacts of coastal defence structures on benthic assemblages. Moreover, the outcomes depended on the transformation used. Patterns of distribution of bivalves, used as surrogates, showed low correlations with the patterns of the total macrofaunal species assemblages. Patterns of polychaetes, if identified to the species or genus level showed higher correlations with the whole dataset. However, the identification of polychaetes to species and genus level is as costly as the identification of all macrobenthic taxa at family level. This study provided additional evidences that taxonomic sufficiency is a useful tool in environmental monitoring, also in investigations on the impacts of coastal defence structures on subtidal macrofauna. The use of coarser taxonomic level, being time-efficient, would allow improving sampling designs of monitoring programs by increasing replication in space and time and by allowing long term monitoring studies.

Holocene oceanographic and climatic variability of the Vega Drift deduced through foraminiferal interpretation

USGS Publications Warehouse

Szymcek, Phillip; Ishman, Scott E.; Domack, Eugene W.; Leventer, Amy

2007-01-01

fusiformis assemblages. Most agglutinated forms tend to decrease downcore, and comparisons to modern analogues imply post-depositional disintegration, while calcareous taxa indicate non-corrosive bottom waters. The lower to middle Holocene Vega Drift sediments are characterized by the calcareous S. fusiformis assemblage and glacial plume sediments. This assemblage is characterized by calcareous forms including Globocassidulina biora, G. subglobosa, and Nonionella iridea. The planktic species Neogloboquadrina pachyderma is associated with the S. fusiformis assemblage. The S. fusiformis assemblage is faunally similar to assemblages described in fjords of the western Antarctic Peninsula and indicates non-corrosive bottom water. Sediments of the mid to upper Holocene interval are characterized by the T. wiesneri and M. arenacea assemblages and indicate the presence of Hyper Saline Shelf Water. These assemblages are similar to modern assemblages directly to the south in the Prince Gustav Channel. The upper Holocene is marked by several small intervals with taxonomic characteristics similar to the S. fusiformis assemblage, indicating periodic introduction of non-corrosive bottom water to the Vega Drift

Zebra mussel effects on benthic invertebrates: physical or biotic?

USGS Publications Warehouse

Botts, P. Silver; Patterson, Benjamin A.; Schloesser, Don W.

1996-01-01

In soft sediments, Dreissena spp. create firm substrate in the form of aggregates of living mussels (druses) that roll free on the sediments. Druses provide physical structure which increases habitat heterogeneity, and the mussels increase benthic organic matter through the production of pseudofeces and feces. Descriptive and experimental studies were used to determine: 1) whether the density of benthic invertebrates in soft sediments increased in the presence of druses, and 2) whether the invertebrate assemblage responded to the physical structure provided by a druse or to some biotic effect associated with the presence of living mussels. In core samples collected biweekly during summer in Presque Isle Bay, Erie, Pennsylvania, amphipods, chironomids, oligochaetes, turbellarians, and hydrozoans were significantly more abundant in sand with druses than in bare sand. When mesh bags containing either a living druse, non-living druse, or no druse were incubated in the bay for 33 d, we found that chironomids were significantly more abundant in treatments with living druses than with non-living druses, and in treatments with non-living druses than with no druse; turbellarians, amphipods, and hydrozoans were significantly more abundant in treatments with living or non-living druses than with no druse; oligochaetes showed no significant differences among treatments. This study demonstrates that most taxa of benthic invertebrates in soft substrate respond specifically to the physical structure associated with aggregates of mussel shells, but further study is needed to examine chironomid responses to some biotic effect dependent on the presence of living mussels.

Linking Environmental Forcing and Trophic Supply to Benthic Communities in the Vercelli Seamount Area (Tyrrhenian Sea)

PubMed Central

Covazzi Harriague, Anabella; Bavestrello, Giorgio; Bo, Marzia; Borghini, Mireno; Castellano, Michela; Majorana, Margherita; Massa, Francesco; Montella, Alessandro; Povero, Paolo; Misic, Cristina

2014-01-01

Seamounts and their influence on the surrounding environment are currently being extensively debated but, surprisingly, scant information is available for the Mediterranean area. Furthermore, although the deep Tyrrhenian Sea is characterised by a complex bottom morphology and peculiar hydrodynamic features, which would suggest a variable influence on the benthic domain, few studies have been carried out there, especially for soft-bottom macrofaunal assemblages. In order to fill this gap, the structure of the meio-and macrofaunal assemblages of the Vercelli Seamount and the surrounding deep area (northern Tyrrhenian Sea – western Mediterranean) were studied in relation to environmental features. Sediment was collected with a box-corer from the seamount summit and flanks and at two far-field sites in spring 2009, in order to analyse the metazoan communities, the sediment texture and the sedimentary organic matter. At the summit station, the heterogeneity of the habitat, the shallowness of the site and the higher trophic supply (water column phytopigments and macroalgal detritus, for instance) supported a very rich macrofaunal community, with high abundance, biomass and diversity. In fact, its trophic features resembled those observed in coastal environments next to seagrass meadows. At the flank and far-field stations, sediment heterogeneity and depth especially influenced the meiofaunal distribution. From a trophic point of view, the low content of the valuable sedimentary proteins that was found confirmed the general oligotrophy of the Tyrrhenian Sea, and exerted a limiting influence on the abundance and biomass of the assemblages. In this scenario, the rather refractory sedimentary carbohydrates became a food source for metazoans, which increased their abundance and biomass at the stations where the hydrolytic-enzyme-mediated turnover of carbohydrates was faster, highlighting high lability. PMID:25343621

Seasonal changes in infaunal community structure in a hypertrophic brackish canal: Effects of hypoxia, sulfide, and predator-prey interaction.

PubMed

Kanaya, Gen; Nakamura, Yasuo; Koizumi, Tomoyoshi; Yamada, Katsumasa

2015-07-01

We conducted a one-year survey of macrozoobenthic community structure at 5 stations in a eutrophic canal in inner Tokyo Bay, focusing on the impacts of hypoxia, sediment H2S, and species interaction in the littoral soft-bottom habitats. Complete defaunation or decreasing density of less-tolerant taxa occurred under hypoxia during warmer months, especially at subtidal or sulfidic stations; this was followed by rapid recolonization by opportunistic polychaetes in fall-winter. Sedimentary H2S increased the mortality of macroinvertebrates under hypoxia or delayed population recovery during recolonization. The density of several polychaetes (e.g., Pseudopolydora reticulata) declined in winter, coincident with immigration of the predator Armandia lanceolata. This suggests that absence of A. lanceolata under moderate hypoxia enabled the proliferation of prey taxa. We conclude that oxygen concentration, sediment H2S, and hypoxia-induced changes in species interactions are potential drivers for spatiotemporal changes in macrozoobenthic assemblage structure in hypoxia-prone soft-bottom communities. Copyright © 2015 Elsevier Ltd. All rights reserved.

Uniform functional structure across spatial scales in an intertidal benthic assemblage.

PubMed

Barnes, R S K; Hamylton, Sarah

2015-05-01

To investigate the causes of the remarkable similarity of emergent assemblage properties that has been demonstrated across disparate intertidal seagrass sites and assemblages, this study examined whether their emergent functional-group metrics are scale related by testing the null hypothesis that functional diversity and the suite of dominant functional groups in seagrass-associated macrofauna are robust structural features of such assemblages and do not vary spatially across nested scales within a 0.4 ha area. This was carried out via a lattice of 64 spatially referenced stations. Although densities of individual components were patchily dispersed across the locality, rank orders of importance of the 14 functional groups present, their overall functional diversity and evenness, and the proportions of the total individuals contained within each showed, in contrast, statistically significant spatial uniformity, even at areal scales <2 m(2). Analysis of the proportional importance of the functional groups in their geospatial context also revealed weaker than expected levels of spatial autocorrelation, and then only at the smaller scales and amongst the most dominant groups, and only a small number of negative correlations occurred between the proportional importances of the individual groups. In effect, such patterning was a surface veneer overlying remarkable stability of assemblage functional composition across all spatial scales. Although assemblage species composition is known to be homogeneous in some soft-sediment marine systems over equivalent scales, this combination of patchy individual components yet basically constant functional-group structure seems as yet unreported. Copyright © 2015 Elsevier Ltd. All rights reserved.

Bacterial biogeography influenced by shelf-basin exchange in the Arctic surface sediment at the Chukchi Borderland.

PubMed

Han, Dukki; Nam, Seung-Il; Ha, Ho Kyung; Kim, Hyoungjun; Sadowsky, Michael J; Lee, Yoo Kyung; Hur, Hor-Gil

2016-02-01

It has been known that continental shelves around the Arctic Ocean play a major role in the ventilation of the deep basins as a consequence of shelf-basin exchange. In the present study, we found that bacterial assemblage of the surface sediment was different from that of seawater while seawater harboured local bacterial assemblages in response to the Arctic hydrography. This finding suggests that the Arctic seafloor sediments may have distinctive bacterial biogeography. Moreover, the distribution of bacterial assemblages and physicochemical properties in surface sediments changed gradually from the Arctic continental shelf to deep-sea basin. Based on the results, bacterial biogeography in the Arctic seafloor sediments may be influenced by winnowing and re-deposition of surface sediments through the sediment gravity flow. The present study offers a deeper understanding of shelf convection and its role for the construction of bacterial assemblages in the Arctic Ocean. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

Sponge assemblages on the deep Mediterranean continental shelf and slope (Menorca Channel, Western Mediterranean Sea)

NASA Astrophysics Data System (ADS)

Santín, Andreu; Grinyó, Jordi; Ambroso, Stefano; Uriz, Maria J.; Gori, Andrea; Dominguez-Carrió, Carlos; Gili, Josep-Maria

2018-01-01

Sponge assemblages on continental shelves and slopes around the world have been known about for centuries. However, due to limitations of the traditional sampling systems, data about individual sponge species rather than assemblages have been reported. This study characterizes sponge assemblages over a wide bathymetric range ( 50-350 m depth) and covering the entire continental shelf and the upper slope of the Menorca Channel, an area soon to be declared a Marine Protected Area (MPA) as part of the Natura 2000 Network. Quantitative analysis of 85 video-transects (a total linear distance of 75 km), together with representative collections to confirm species identifications, allowed us to discriminate six major assemblages. Differences in the assemblages mainly corresponded to differences in substrate type and depth. On the inner continental shelf, a semi-sciaphilous Axinellid assemblage dominated the rocky outcrops. Maërl beds on the inner continental shelf were dominated by Haliclona (Reniera) mediterranea, whereas the horny sponge Aplysina cavernicola and several other haliclonids mostly dominated maërl beds and rocky substrates of the outer shelf. Soft sediments on the shelf break hosted a monospecific Thenea muricata assemblage, whereas rocky substrates of the shelf break were characterized by a mixture of encrusting, columnar and fan-shaped sponges. Finally, the upper slope was dominated by Hamacantha (Vomerula) falcula and the hexactinellid Tretodictyum reiswigi. Overall, sponge diversity showed its highest values above the shelf break, plummeting severely on the upper slope. Despite this diversity decrease, we found very high densities (> 70 ind./m2) of sponges over vast areas of both the shelf break and the upper slope.

Technical Note: The effects of five different defaunation methods on biogeochemical properties of intertidal sediment

NASA Astrophysics Data System (ADS)

Tolhurst, T. J.; Chapman, M. G.; Underwood, A. J.; Cruz, J. J.

2012-09-01

Various methods have been used to remove organisms from sediments to investigate structure and function of faunal assemblages in intertidal habitats. Nevertheless, little is known about how these treatments affect properties of the sediments themselves, although changing these properties may cause changes in the assemblages, independently of other hypotheses being tested. This study assesses the efficacy of defaunation and effect on selected biogeochemical properties of five different methods of defaunating soft muddy sediments in an estuary. The methods were removal and freezing of sediment, removal and oven-heating, freezing in situ with liquid N2, spraying with formalin and spraying with hydrogen peroxide. The first four of these methods have been used in previous studies, whilst the fifth was considered to be a potentially useful defaunator because it does not leave toxic residues. The first two methods required sediment to be brought back to the lab, disrupting the natural structure of the sediment; the last three were done in situ, with much less disturbance. Variables measured to assess effects of the treatments on the sediment were amount of water, grain size, total carbohydrate, suspension index (relative erosion rate), erosion threshold, chlorophyll a and b, colloidal carbohydrate, Fo (minimal fluorescence) and Fv / Fm (photosynthetic yield). There were no significant effects of any treatment on the first four variables. For the others, effects of defaunation varied from treatment to treatment and with time after treatment. Generally, the greatest disturbance was to the microphytobenthos (MPB, measured by chlorophyll and fluorescence) and related variables. For most treatments, recovery was rapid, but the effects of formalin and H2O2 persisted for a few days. Effects on physical properties of the sediment were mostly minor and insignificant. Removal and freezing or heating, however, caused major changes to the sediments because of the disturbances involved. Choosing the appropriate method of defaunation is very important if interpretations are not to be confounded between the effects of defaunation per se and any effects of changes to other biota (such as microphytobenthos) and/or the properties of sediments caused by the method used to defaunate experimental areas.

Functional biodiversity of marine soft-sediment polychaetes from two Mediterranean coastal areas in relation to environmental stress.

PubMed

Nasi, F; Nordström, M C; Bonsdorff, E; Auriemma, R; Cibic, T; Del Negro, P

2018-06-01

Biological Traits Analysis (BTA) was used to identify functional features of infaunal polychaete assemblages associated with contamination in two Italian coastal areas: the harbour of Trieste (Adriatic Sea) and the Mar Piccolo of Taranto (Ionian Sea). The analysis was performed on 103 taxa, collected at four stations in each area. The two areas differed in species composition. The low diversity and the presence of stress-tolerant species in more polluted sites were not reflected in functional diversity, due to species contributing little to community functions or being functionally redundant. Sand and clay fractions were significant drivers of trait category expressions, however other environmental parameters (depth, total organic carbon and nitrogen, and Hg in sediments) influenced traits composition. Motile was the prevalent trait in environments with coarse sediments, and tube-builder were related to fine-grained ones. Motile, endobenthic and burrower were essential traits for living in contaminated sediments. Epibenthic and sessile polychaetes dominated at stations subjected to high organic loads. BTA offers an integrative approach to detect functional adaptations to contaminated sediments and multiple anthropogenic stressors. Copyright © 2018 Elsevier Ltd. All rights reserved.

Beyond the bed: effects of metal contamination on recruitment to bedded sediments and overlying substrata.

PubMed

Hill, Nicole A; Simpson, Stuart L; Johnston, Emma L

2013-02-01

Metal-contaminated sediments pose a recognised threat to sediment-dwelling fauna. Re-mobilisation of contaminated sediments however, may impact more broadly on benthic ecosystems, including on diverse assemblages living on hard substrata patches immediately above sediments. We used manipulative field experiments to simultaneously test for the effects of metal contamination on recruitment to marine sediments and overlying hard substrata. Recruitment to sediments was strongly and negatively affected by metal contamination. However, while assemblage-level effects on hard-substratum fauna and flora were observed, most functional groups were unaffected or slightly enhanced by exposure to contaminated sediments. Diversity of hard-substratum fauna was also enhanced by metal contamination at one site. Metal-contaminated sediments appear to pose less of a hazard to hard-substratum than sediment-dwelling assemblages, perhaps due to a lower direct contaminant exposure or to indirect effects mediated by contaminant impacts on sediment fauna. Our results indicate that current sediment quality guidelines are protective of hard-substrata organisms. Crown Copyright © 2012. Published by Elsevier Ltd. All rights reserved.

Relationships of sedimentation and benthic macroinvertebrate assemblages in headwater streams using systematic longitudinal sampling at the reach scale.

PubMed

Longing, S D; Voshell, J R; Dolloff, C A; Roghair, C N

2010-02-01

Investigating relationships of benthic invertebrates and sedimentation is challenging because fine sediments act as both natural habitat and potential pollutant at excessive levels. Determining benthic invertebrate sensitivity to sedimentation in forested headwater streams comprised of extreme spatial heterogeneity is even more challenging, especially when associated with a background of historical and intense watershed disturbances that contributed unknown amounts of fine sediments to stream channels. This scenario exists in the Chattahoochee National Forest where such historical timber harvests and contemporary land-uses associated with recreation have potentially affected the biological integrity of headwater streams. In this study, we investigated relationships of sedimentation and the macroinvertebrate assemblages among 14 headwater streams in the forest by assigning 30, 100-m reaches to low, medium, or high sedimentation categories. Only one of 17 assemblage metrics (percent clingers) varied significantly across these categories. This finding has important implications for biological assessments by showing streams impaired physically by sedimentation may not be impaired biologically, at least using traditional approaches. A subsequent multivariate cluster analysis and indicator species analysis were used to further investigate biological patterns independent of sedimentation categories. Evaluating the distribution of sedimentation categories among biological reach clusters showed both within-stream variability in reach-scale sedimentation and sedimentation categories generally variable within clusters, reflecting the overall physical heterogeneity of these headwater environments. Furthermore, relationships of individual sedimentation variables and metrics across the biological cluster groups were weak, suggesting these measures of sedimentation are poor predictors of macroinvertebrate assemblage structure when using a systematic longitudinal sampling design. Further investigations of invertebrate sensitivity to sedimentation may benefit from assessments of sedimentation impacts at different spatial scales, determining compromised physical habitat integrity of specific taxa and developing alternative streambed measures for quantifying sedimentation.

Total assemblages of benthic foraminifera from a mixed siliciclastic/carbonate inner shelf; preliminary results from the bays of Soline and Nin (Adriatic Sea, Croatia)

NASA Astrophysics Data System (ADS)

Vidović, J.; Ćosović, V.; Juračić, M.; Benac, Č.

2012-04-01

Eastern Adriatic shelf is mixed siliciclastic/carbonate area with a great proportion of carbonate biogenous production. This study presents analysis and comparison of total benthic foraminiferal assemblages (their composition, diversity and distribution) in surface sediments from two Eastern Adriatic shallow water bays (Soline and Nin Bay), sampled seasonally from 2006 to 2008. In order to characterize the carbonate sediment production, 62 samples along the bathymetric profiles (from 2 to 20 m) were collected by scuba diving with short PVC corers. Granulometrical analysis was done using method of wet sieving. Statistical analyses (cluster analysis, PCA) were performed using Past program. The most abundant biogenous components in different sediments from Soline Bay (muddy sandy gravel and mud) are foraminifera, followed by fragments of mollusks, gastropods, bryozoans and sea urchins. Foraminiferal assemblages are high diversified as confirmed by Shannon-Wiener index varying from 2.14 to 3.39, Fisher α index from 5.74 to 16.30 and Equitability from 0.32 to 0.72. The shallowest part of the bay is covered with the sand, consisted of high proportion of siliciclastic component and impoverished in biogenous remnants. Foraminiferal assemblages have low diversity (Shannon-Wiener index 1.36, Fisher α index 2.31 and Equitability 0.32). Throughout Nin Bay, sediments (classified as sand, muddy sand and mud) are consisted of various biogenic remnants. Foraminiferal assemblages have high biodiversity, with Shannon-Wiener index varying from 2.51 to 3.20, α-Fisher index from 7.84 to 12.64 and Equitability from 0.37 to 0.77. Statistical analyses (cluster analysis and PCA) grouped foraminifera in two major assemblages, related to sediment type. On sandy and gravely substrates, assemblage is dominated by epifaunal genera and species: Quinqueloculina sp. (6-20%), Elphidium sp. (5-16%), Neoconorbina terquemi (6-10 %) and Asterigerinata mamilla (5-7%). Infaunal species, Ammonia beccarii (5-16%), Ammonia inflata (5-36%), Ammonia tepida (6-38%) and genus Haynesina sp. (6-31%) dominate assemblages in muddy sediments. The only reworked species Aubignyna planidorso is found in the shallowest part of Soline Bay, making 20 to 65% of the assemblage.

Diatoms in sediments of perennially ice-covered Lake Hoare, and implications for interpreting lake history in the McMurdo Dry Valleys of Antarctica

USGS Publications Warehouse

Spaulding, S.A.; McKnight, Diane M.; Stoermer, E.F.; Doran, P.T.

1997-01-01

Diatom assemblages in surficial sediments, sediment cores, sediment traps, and inflowing streams of perennially ice-covered Lake Hore, South Victorialand, Antarctica were examined to determine the distribution of diatom taxa, and to ascertain if diatom species composition has changed over time. Lake Hoare is a closed-basin lake with an area of 1.8 km2, maximum depth of 34 m, and mean depth of 14 m, although lake level has been rising at a rate of 0.09 m yr-1 in recent decades. The lake has an unusual regime of sediment deposition: coarse grained sediments accumulate on the ice surface and are deposited episodically on the lake bottom. Benthic microbial mats are covered in situ by the coarse episodic deposits, and the new surfaces are recolonized. Ice cover prevents wind-induced mixing, creating the unique depositional environment in which sediment cores record the history of a particular site, rather than a lake=wide integration. Shallow-water (<1 m) diatom assemblages (Stauroneis anceps, Navicula molesta, Diadesmis contenta var. parallela, Navicula peraustralis) were distinct from mid-depth (4-16 m) assemblages (Diadesmis contenta, Luticola muticopsis fo. reducta, Stauroneis anceps, Diadesmis contenta var. parallela, Luticola murrayi) and deep-water (2-31 m) assemblages (Luticola murrayi, Luticola muticopsis fo. reducta, Navicula molesta. Analysis of a sediment core (30 cm long, from 11 m water depth) from Lake Hoare revealed two abrupt changes in diatom assemblages. The upper section of the sediment core contained the greatest biomass of benthic microbial mat, as well as the greatest total abundance and diversity of diatoms. Relative abundances of diatoms in this section are similar to the surficial samples from mid-depths. An intermediate zone contained less organic material and lower densities of diatoms. The bottom section of core contained the least amount of microbial mat and organic material, and the lowest density of diatoms. The dominant process influencing species composition and abundance of diatom assemblages in the benthic microbial mats is episodic deposition of coarse sediment from the ice surface.

Macroinvertebrate palaeo-communities from the Jurassic succession of Gebel Maghara (Sinai, Egypt)

NASA Astrophysics Data System (ADS)

Abdelhady, Ahmed Awad; Fürsich, Franz Theodor

2014-09-01

Macrobenthic palaeo-communities of the Middle and Upper Jurassic strata of G. Maghara, Egypt, were investigated to identify relationships with environmental parameters and to trace the temporal changes of the ecosystem associated with sea-level fluctuations. The quantitative analysis of a data matrix comprising 198 macrobenthic taxa in 138 samples collected from four sections identified nine associations and three assemblages, interpreted to be representative of their original environment. Non-Metric Multidimensional Scaling (NMDS) delineated the same degree of habitat partitioning as hierarchical clusters with very little overlap. Detrended Correspondence Analysis (DCA) identified water depth as the primary environmental gradient controlling the distribution of the fauna, while Axis 2 reflects substrate consistency. Community structure is related to the various ramp environments. Based on diversities, the associations and assemblages have been divided into two major groups, low-stress polyspecific associations and high-stress paucispecific associations. The low-stress polyspecific associations were interpreted to represent two different habitats, a high-energy, firm substrate habitat, in which epifaunal bivalves and brachiopods in addition to solitary corals dominated during advanced stages of transgression, and a low-energy, soft substrate habitat dominated by infaunal bivalves during the maximum flooding. The high-stress paucispecific associations are dominated by one or few taxa and occurred (1) in an oligotrophic setting that developed during episodes of sediment starvation in restricted inner ramp environments or during early transgression, (2) in a setting characterized by high sedimentation rates which developed during advanced regression, (3) in a distal prodelta setting with soft substrate and dysoxia during sea-level lowstand, and (4) in a high-energy shoal environment during peak regression. A combined stress involving a shortage in food supply, episodic dysoxia, in addition to a soupy substrate may have developed during maximum flooding episodes. Hydrodynamic conditions were most likely the main factor controlling the benthic communities. Hydrodynamic conditions influenced the substrate type, redistributed nutrients and were responsible for stratified water masses and hypoxia. Animal-sediment relationships in addition to replacement between bivalves and brachiopods are also discussed. Middle ramp settings were found to provide the best conditions for macrobenthos.

Effectiveness of benthic foraminiferal and coral assemblages as water quality indicators on inshore reefs of the Great Barrier Reef, Australia

NASA Astrophysics Data System (ADS)

Uthicke, S.; Thompson, A.; Schaffelke, B.

2010-03-01

Although the debate about coral reef decline focuses on global disturbances (e.g., increasing temperatures and acidification), local stressors (nutrient runoff and overfishing) continue to affect reef health and resilience. The effectiveness of foraminiferal and hard-coral assemblages as indicators of changes in water quality was assessed on 27 inshore reefs along the Great Barrier Reef. Environmental variables (i.e., several water quality and sediment parameters) and the composition of both benthic foraminiferal and hard-coral assemblages differed significantly between four regions (Whitsunday, Burdekin, Fitzroy, and the Wet Tropics). Grain size and organic carbon and nitrogen content of sediments, and a composite water column parameter (based on turbidity and concentrations of particulate matter) explained a significant amount of variation in the data (tested by redundancy analyses) in both assemblages. Heterotrophic species of foraminifera were dominant in sediments with high organic content and in localities with low light availability, whereas symbiont-bearing mixotrophic species were dominant elsewhere. A similar suite of parameters explained 89% of the variation in the FORAM index (a Caribbean coral reef health indicator) and 61% in foraminiferal species richness. Coral richness was not related to environmental setting. Coral assemblages varied in response to environmental variables, but were strongly shaped by acute disturbances (e.g., cyclones, Acanthaster planci outbreaks, and bleaching), thus different coral assemblages may be found at sites with the same environmental conditions. Disturbances also affect foraminiferal assemblages, but they appeared to recover more rapidly than corals. Foraminiferal assemblages are effective bioindicators of turbidity/light regimes and organic enrichment of sediments on coral reefs.

Response of soft-bottom macrobenthic assemblages to artisanal trawling fisheries in a subtropical estuary

NASA Astrophysics Data System (ADS)

Ortega, Ileana; Colling, Leonir André; Dumont, Luiz Felipe Cestari

2018-07-01

Bottom trawling is one of the most harmful and widespread activities affecting benthic habitats and fauna. In this study, we analyzed the impact of shrimp trawling fisheries on the densities, assemblage structure and vertical stratification of the benthic macrofauna in shallow mudflats of the Patos Lagoon Estuary (Brazil). Experimental trawls of different intensities were performed during three shrimp fishing seasons (2015-2017), comparing macrofauna among before and after trawling, and a control zone. The changes in macrofaunal assemblages were more consistently related to natural variability than to trawling impact, being mostly influenced by sediment structure and salinity variation. The trawling impact was mainly detected in the area with higher percentages of fine sediments, with different macrofaunal responses in each month and stratum. Some non-significant decreases on total densities after trawling were observed, mainly on the superficial stratum, and signs of burial activities. The response to trawling disturbance of each species was different and it highly depended on their natural variability. Only five species showed significant variation to the trawling treatment (Erodona mactroides, Heleobia australis, H. charruana, Heteromastus similis and Laeonereis acuta), with temporally different responses. Decreasing densities were more related to the high impact treatment. In some seasons, decreases on the abundance of Monokalliapseudes schubarti after high impact trawls were up to 60% of the seasonal mean densities. Trawling fisheries may reduce macrobenthic densities but not their vertical stratification. The impact of trawling on key species may compromise the ecosystem function, as benthic macrofauna provide food sources for many aquatic resources. This study highlights trawling impacts in an estuarine nursery area, which should be fully considered since they may be reflected in the trophic webs.

Differences in biological traits composition of benthic assemblages between unimpacted habitats.

PubMed

Bolam, S G; Garcia, C; Eggleton, J; Kenny, A J; Buhl-Mortensen, L; Gonzalez-Mirelis, G; van Kooten, T; Dinesen, G; Hansen, J; Hiddink, J G; Sciberras, M; Smith, C; Papadopoulou, N; Gumus, A; Van Hoey, G; Eigaard, O R; Bastardie, F; Rijnsdorp, A D

2017-05-01

There is an implicit requirement under contemporary policy drivers to understand the characteristics of benthic communities under anthropogenically-unimpacted scenarios. We used a trait-based approach on a large dataset from across the European shelf to determine how functional characteristics of unimpacted benthic assemblages vary between different sedimentary habitats. Assemblages in deep, muddy environments unaffected by anthropogenic disturbance show increased proportions of downward conveyors and surface deposit-feeders, while burrowing, diffusive mixing, scavenging and predation traits assume greater numerical proportions in shallower habitats. Deep, coarser sediments are numerically more dominated by sessile, upward conveyors and suspension feeders. In contrast, unimpacted assemblages of coarse sediments in shallower regions are proportionally dominated by the diffusive mixers, burrowers, scavengers and predators. Finally, assemblages of gravelly sediments exhibit a relatively greater numerical dominance of non-bioturbators and asexual reproducers. These findings may be used to form the basis of ranking habitats along a functional sensitivity gradient. Crown Copyright © 2017. Published by Elsevier Ltd. All rights reserved.

Coal-tar-based sealcoated pavement: a major PAH source to urban stream sediments.

PubMed

Witter, Amy E; Nguyen, Minh H; Baidar, Sunil; Sak, Peter B

2014-02-01

We used land-use analysis, PAH concentrations and assemblages, and multivariate statistics to identify sediment PAH sources in a small (~1303 km(2)) urbanizing watershed located in South-Central, Pennsylvania, USA. A geographic information system (GIS) was employed to quantify land-use features that may serve as PAH sources. Urban PAH concentrations were three times higher than rural levels, and were significantly and highly correlated with combined residential/commercial/industrial land use. Principal components analysis (PCA) was used to group sediments with similar PAH assemblages, and correlation analysis compared PAH sediment assemblages to common PAH sources. The strongest correlations were observed between rural sediments (n = 7) and coke-oven emissions sources (r = 0.69-0.78, n = 5), and between urban sediments (n = 22) and coal-tar-based sealcoat dust (r = 0.94, n = 47) suggesting that coal-tar-based sealcoat is an important urban PAH source in this watershed linked to residential and commercial/industrial land use. Copyright © 2013 Elsevier Ltd. All rights reserved.

Patterns of seasonal variation in lagoonal macrozoobenthic assemblages (Mellah lagoon, Algeria).

PubMed

Magni, Paolo; Draredja, Brahim; Melouah, Khalil; Como, Serena

2015-08-01

In coastal lagoons, many studies indicated that macrozoobenthic assemblages undergo marked temporal fluctuations as related to the strong environmental variability of these systems. However, most of these studies have not assessed the seasonal patterns of these fluctuations and none of them has investigated the consistency of this variation in different areas within the same lagoon system. In this study, we assessed patterns of variation at multiple temporal (date, season and year) scales in two different areas in the coastal lagoon of Mellah (northeast Algeria). These areas (hereafter Shore and Center) are representative of two different environments typically found in coastal lagoons. The Shore (water depth of about 1.5-2 m) is characterized by relatively higher hydrodynamics, sand to silty-sand sediments and the presence of vegetation (Ruppia maritima), the Center (water depth of about 3-3.5 m) is characterized by mud to sandy-mud, organic-enriched sediments due to fine particle accumulation. Results showed two distinct patterns of seasonal variation in Shore and Center assemblages for two consecutive years. In Shore, species richness (S), total abundance (N) and the abundance of several dominant taxa were highest in summer and/or autumn. This pattern can be related to the local environmental conditions maintaining relatively well oxidized conditions, while increasing food availability, and favoring the recruitment of species and individuals in summer/autumn. On the contrary in Center, S was lowest in summer and autumn, and N and the abundance of fewer dominant taxa were lowest in summer. In Center, the bivalve Loripes lucinalis showed a 10-fold increase from summer to autumn in both years, likely related to the lagoon's hydrodynamics favoring larval transport and settlement in the central sector of the lagoon. Overall, the seasonal variation found in Center followed a regression/recovery pattern typical of opportunistic assemblages occurring in confined organic-enriched environments. In conclusion, our results provide new insight into the patterns of seasonal variation in lagoon soft-sediment benthos and highlight the importance of local environmental conditions on this variation. This study provides a valuable tool for adopting appropriate monitoring strategies in these systems, with special reference to Southern-Eastern Mediterranean lagoons which are expected to suffer from increasing coastal development and human pressure in the near future. Copyright © 2015 Elsevier Ltd. All rights reserved.

Assessing environmental impact from gas and oil exploration in the SW Barents Sea using benthic foraminiferal assemblages

NASA Astrophysics Data System (ADS)

Dijkstra, N.; Junttila, J.; Husum, K.; Carroll, J.; Hald, M.

2012-04-01

During the last decades petroleum industry and shipping activities have increased in the SW Barents Sea. Oil exploration wells were drilled in the 1980s with production starting in 2007. These activities are projected to expand in the coming years. As part of the Northern Environmental Waste Management (EWMA) project, a competence cluster for petroleum industry related waste handling, we investigate the impacts of enhanced anthropogenic activities on benthic foraminiferal assemblages in the SW Barents Sea. Sediment cores (0-20 cm) from sites in proximity to two oil- and gas fields are under investigation. These sediment cores, dated with the 210Pb method, represent the last 90 to 150 years. Both dead and living benthic foraminifera (100 µm-1 mm) were counted to elucidate differences in foraminiferal assemblages between pre-impact and recent conditions. In addition, the heavy metal concentrations, persistent organic pollutant (POP) concentrations, grain size and total organic content (TOC) of the sediment cores have been analyzed. Pollution levels of the surface sediments (0-1 cm) are of background to good level (level I-II) according to the definitions of the Water Framework Directorate (WFD). Patterns in living benthic foraminiferal assemblages identified in the sea floor surface sediments, are the result of natural environmental changes such as depth, water mass and sediment composition. Further downcore (1-20 cm) pollution levels are in general of background environmental status (WFD level I). However, at some depth intervals, especially in sediment cores from the near proximity of the oil- and gas- fields, pollution levels are slightly enhanced (WFD level II). Further work will include statistical comparison of dead and living foraminiferal assemblages with sediment pollution levels, sediment properties, and oceanographic conditions. This research contributes to the development of foraminifera as a useful bio-monitoring technique for the Arctic region as industrial activities increase in the coming years.

High Meiofaunal and Nematodes Diversity around Mesophotic Coral Oases in the Mediterranean Sea

PubMed Central

Bianchelli, Silvia; Pusceddu, Antonio; Canese, Simone; Greco, Silvio; Danovaro, Roberto

2013-01-01

Although the mesophotic zone of the Mediterranean Sea has been poorly investigated, there is an increasing awareness about its ecological importance for its biodiversity, as fish nursery and for the recruitment of shallow water species. Along with coastal rocky cliffs, isolated coralligenous concretions emerging from muddy bottoms are typical structures of the Mediterranean Sea mesophotic zone. Coralligenous concretions at mesophotic depths in the South Tyrrhenian Sea were investigated to assess the role of these coralligenous oases in relation to the biodiversity of surrounding soft sediments. We show here that the complex structures of the coralligenous concretions at ca. 110 m depth influence the trophic conditions, the biodiversity and assemblage composition in the surrounding sediments even at considerable distances. Coral concretions not only represent deep oases of coral biodiversity but they also promote a higher biodiversity of the fauna inhabiting the surrounding soft sediments. Using the biodiversity of nematodes as a proxy of the total benthic biodiversity, a high turnover biodiversity within a 200 m distance from the coralligenous concretions was observed. Such turnover is even more evident when only rare taxa are considered and seems related to specific trophic conditions, which are influenced by the presence of the coralligenous structures. The presence of a high topographic complexity and the trophic enrichment make these habitats highly biodiverse, nowadays endangered by human activities (such as exploitation of commercial species such as Corallium rubrum, or trawling fisheries, which directly causes habitat destruction or indirectly causes modification in the sedimentation and re-suspension rates). We stress that the protection of the coralligenous sea concretions is a priority for future conservation policies at the scale of large marine ecosystems and that a complete census of these mesophotic oases of biodiversity should be a priority for future investigations in the Mediterranean Sea. PMID:23823621

Late Quaternary high resolution micropaleontological and sedimentological records in the Gulf of Cadiz.

NASA Astrophysics Data System (ADS)

Balestra, B.; Ducassou, E.; Zarikian, C.; Bout-Roumazeilles, V.; Flores, J. A.; Paytan, A.

2017-12-01

We present preliminary micropaleontological and sedimentological data from IODP Site U1390 (Expedition 339), located in the central middle slope of the Gulf of Cadiz, since the last glaciation. This site has been targeted for reconstruction of regional paleo-circulation as it shows particularly high sedimentation rates, throughout the Holocene and the Last Glacial Maximum (LGM). We use micropaleontological and sedimentological proxies to understand the bottom current variations through time and the ecological conditions at the sea surface (planktonic foraminifer, pteropod and nannofossil assemblages), and the sea bottom (ostracod assemblages). Eleven samples, chosen at transitions of planktonic foraminifer assemblages, have been dated by AMS radiocarbon analyses. Preliminary results from benthic ostracod assemblages show variations in bottom water ventilation and food supply. Planktonic foraminifer assemblages clearly show the well-known cold events of this period such as the Younger Dryas and Heinrich stadial associated to coarser sediment, and warmer phases such as the Bölling-Allerød associated to muddy sediment. Other bio-events within the Holocene period are also recorded. The preservation of the coccolithophore assemblages is good to moderate. Coccolith abundances (expressed in coccoliths/gr of sediment) show higher values during the Holocene and generally are like assemblages previously reported for the same area. Implications for characterization of the Holocene, the last termination and LGM ecological conditions at high resolution and their potential fluctuations (i.e. amplitude and magnitude) under the influence of the lower core of the Mediterranean Outflow Water (MOW), with this multi proxy approach based on sedimentological, and paleontological data will be discussed.

High Levels of Sediment Contamination Have Little Influence on Estuarine Beach Fish Communities

PubMed Central

McKinley, Andrew C.; Dafforn, Katherine A.; Taylor, Matthew D.; Johnston, Emma L.

2011-01-01

While contaminants are predicted to have measurable impacts on fish assemblages, studies have rarely assessed this potential in the context of natural variability in physico-chemical conditions within and between estuaries. We investigated links between the distribution of sediment contamination (metals and PAHs), physico-chemical variables (pH, salinity, temperature, turbidity) and beach fish assemblages in estuarine environments. Fish communities were sampled using a beach seine within the inner and outer zones of six estuaries that were either heavily modified or relatively unmodified by urbanization and industrial activity. All sampling was replicated over two years with two periods sampled each year. Shannon diversity, biomass and abundance were all significantly higher in the inner zone of estuaries while fish were larger on average in the outer zone. Strong differences in community composition were also detected between the inner and outer zones. Few differences were detected between fish assemblages in heavily modified versus relatively unmodified estuaries despite high concentrations of sediment contaminants in the inner zones of modified estuaries that exceeded recognized sediment quality guidelines. Trends in species distributions, community composition, abundance, Shannon diversity, and average fish weight were strongly correlated to physico-chemical variables and showed a weaker relationship to sediment metal contamination. Sediment PAH concentrations were not significantly related to the fish assemblage. These findings suggest that variation in some physico-chemical factors (salinity, temperature, pH) or variables that co-vary with these factors (e.g., wave activity or grain size) have a much greater influence on this fish assemblage than anthropogenic stressors such as contamination. PMID:22039470

Comparison of three preservation techniques for slowing dissolution of calcareous nannofossils in organic rich sediments

USGS Publications Warehouse

Seefelt, Ellen L.; Self-Trail, Jean; Schultz, Arthur P.

2015-01-01

In an attempt to halt or reduce dissolution of calcareous nannofossils in organic and/or pyrite-rich sediments, three different methods of short-term storage preservation were tested for efficacy: vacuum packing, argon gas replacement, and buffered water. Abundance counts of calcareous nannofossil assemblages over a six month period showed that none of the three preservation methods were consistently effective in reducing assemblage loss due to dissolution. In most cases, the control slides made at the drill site had more abundant calcareous nannofossil assemblages than those slides made from sediments stored via vacuum packing, argon gas replacement, or buffered water. Thin section and XRD analyses showed that in most cases, <1% pyrite was needed to drive the oxidation-reduction reaction that resulted in dissolution, even in carbonate-rich sediments.

Light-Dependant Biostabilisation of Sediments by Stromatolite Assemblages

PubMed Central

Paterson, David M.; Aspden, Rebecca J.; Visscher, Pieter T.; Consalvey, Mireille; Andres, Miriam S.; Decho, Alan W.; Stolz, John; Reid, R. Pamela

2008-01-01

For the first time we have investigated the natural ecosystem engineering capacity of stromatolitic microbial assemblages. Stromatolites are laminated sedimentary structures formed by microbial activity and are considered to have dominated the shallows of the Precambrian oceans. Their fossilised remains are the most ancient unambiguous record of early life on earth. Stromatolites can therefore be considered as the first recognisable ecosystems on the planet. However, while many discussions have taken place over their structure and form, we have very little information on their functional ecology and how such assemblages persisted despite strong eternal forcing from wind and waves. The capture and binding of sediment is clearly a critical feature for the formation and persistence of stromatolite assemblages. Here, we investigated the ecosystem engineering capacity of stromatolitic microbial assemblages with respect to their ability to stabilise sediment using material from one of the few remaining living stromatolite systems (Highborne Cay, Bahamas). It was shown that the most effective assemblages could produce a rapid (12–24 h) and significant increase in sediment stability that continued in a linear fashion over the period of the experimentation (228 h). Importantly, it was also found that light was required for the assemblages to produce this stabilisation effect and that removal of assemblage into darkness could lead to a partial reversal of the stabilisation. This was attributed to the breakdown of extracellular polymeric substances under anaerobic conditions. These data were supported by microelectrode profiling of oxygen and calcium. The structure of the assemblages as they formed was visualised by low-temperature scanning electron microscopy and confocal laser microscopy. These results have implications for the understanding of early stromatolite development and highlight the potential importance of the evolution of photosynthesis in the mat forming process. The evolution of photosynthesis may have provided an important advance for the niche construction activity of microbial systems and the formation and persistence of the stromatolites which came to dominate shallow coastal environments for 80% of the biotic history of the earth. PMID:18781202

Light-dependant biostabilisation of sediments by stromatolite assemblages.

PubMed

Paterson, David M; Aspden, Rebecca J; Visscher, Pieter T; Consalvey, Mireille; Andres, Miriam S; Decho, Alan W; Stolz, John; Reid, R Pamela

2008-09-10

For the first time we have investigated the natural ecosystem engineering capacity of stromatolitic microbial assemblages. Stromatolites are laminated sedimentary structures formed by microbial activity and are considered to have dominated the shallows of the Precambrian oceans. Their fossilised remains are the most ancient unambiguous record of early life on earth. Stromatolites can therefore be considered as the first recognisable ecosystems on the planet. However, while many discussions have taken place over their structure and form, we have very little information on their functional ecology and how such assemblages persisted despite strong eternal forcing from wind and waves. The capture and binding of sediment is clearly a critical feature for the formation and persistence of stromatolite assemblages. Here, we investigated the ecosystem engineering capacity of stromatolitic microbial assemblages with respect to their ability to stabilise sediment using material from one of the few remaining living stromatolite systems (Highborne Cay, Bahamas). It was shown that the most effective assemblages could produce a rapid (12-24 h) and significant increase in sediment stability that continued in a linear fashion over the period of the experimentation (228 h). Importantly, it was also found that light was required for the assemblages to produce this stabilisation effect and that removal of assemblage into darkness could lead to a partial reversal of the stabilisation. This was attributed to the breakdown of extracellular polymeric substances under anaerobic conditions. These data were supported by microelectrode profiling of oxygen and calcium. The structure of the assemblages as they formed was visualised by low-temperature scanning electron microscopy and confocal laser microscopy. These results have implications for the understanding of early stromatolite development and highlight the potential importance of the evolution of photosynthesis in the mat forming process. The evolution of photosynthesis may have provided an important advance for the niche construction activity of microbial systems and the formation and persistence of the stromatolites which came to dominate shallow coastal environments for 80% of the biotic history of the earth.

Predicting stress in benthic communities of southeastern U.S. estuaries in relation to chemical contamination of sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hyland, J.L.; Dolah, R.F. van; Snoots, T.R.

1999-11-01

Matching data on sediment contaminants (metals, PAHs, PCBs) and macroinfaunal community structure from 231 subtidal stations in southeastern US estuaries were used to develop a framework for evaluating risks of benthic impacts from multiple-contaminant exposure. Sediment contamination was expressed as the mean ratio of individual contaminant concentrations relative to corresponding sediment quality guidelines, that is, to effects range-median (ERM) values, probable effects level (PEL) values, or an aggregate of the two. The probability of a degraded benthos was relatively low in samples with mean ERM quotients {le}0.020, PEL quotients {le}0.035, or combined ERM/PEL quotients {le}0.024. Only 5% of stations withinmore » these ranges had degraded benthic assemblages, while 95% had healthy assemblages. A higher probability of benthic impacts was observed in samples with mean ERM quotients >0.058, PEL quotients >0.096, or ERM/PEL quotients >0.077. Seventy-three to 78% of stations with values in these upper ranges had degraded benthic assemblages, while 22 to 27% had healthy assemblages. Only four stations (three with degraded, one with healthy assemblages) had mean ERM or PEL quotients >1.0, which is the beginning of the range associated with a high probability of mortality in short-term laboratory toxicity tests using amphipods.« less

Decadal-scale changes in benthic foraminiferal assemblages off Key Largo, Florida

USGS Publications Warehouse

Cockey, E.; Hallock, P.; Lidz, B.H.

1996-01-01

Assemblages of foraminiferal tests in sediments sampled off Key Largo, Florida, in 1982, 1991, and 1992 were significantly different from assemblages sampled along the same traverses in 1959-1961. Larger, algal symbiont-bearing taxa, primarily Soritidae, comprised 50-80% of the specimens in samples collected in 1959-1961, whereas Miliolidae and Rotaliidae comprised 65-90% of the specimens collected in 1991 and 1992. Test abundance in 1992 samples ranged from 1.0 ?? 102/g to 8.1 ?? 104/g; tests were least abundant in coarse, well-sorted sediments. The lack of test-density data for the 1959-1961 samples prevented assessment of whether densities of smaller foraminifera have increased, symbiotic foraminifera have decreased, or both. Between 1982 and 1992, densities of smaller foraminifera appear to have increased. Although the causes of these changes in foraminiferal assemblages are not known, possible factors include nutrient loading inshore, winnowing and transport of tests by storm activity, and disease. The shift in dominance from long-lived, algal symbiont-bearing taxa in 1959-1961 to small, fast-growing, heterotrophic taxa in 1992 is consistent with predictions of community response to gradually increasing nutrient flux into south Florida's coastal waters. This study indicates that published accounts of foraminiferal assemblages from sediments collected 30 or more years ago can be valuable resources in efforts to determine if biotic changes have occurred in coastal ecosystems. This study also indicates that family-level identifications may be sufficient to detect decadal-scale changes in foraminiferal assemblages in reef-tract sediments.

Caractéristiques et signification d'un niveau coquillier majeur à brachiopodes, marqueur événementiel dans l'évolution dévonienne de la Saoura (Sahara du Nord-Ouest, Algérie)

NASA Astrophysics Data System (ADS)

Ouali Mehadji, Abdelkader; Elmi, Serge; Rachebœuf, Patrick; Mekahli, Larbi

2004-11-01

In the Saoura, the brachiopod shell beds, so-called niveau coralligène, correspond to a major shell deposit dated to the Late Emsian. Brachiopods and crinoids dominate the benthic assemblage that contains also corals, bryozoans, trilobites, goniatites, and orthocones. This major level has a large geographic distribution and it is characterized by a wide brachiopod diversity due to time-averaging, taphonomic feedback and alternate bottom conditions changing from soft to shelly and firm. This kind of brachiopod association is linked to a transgressive onlap system. At regional extent, we can correlate this major shell bed to similar shell deposits from the Ahnet-Mouydir, Tindouf, and Zemmour areas. It indicates an important transgressive event underlined by change in the sedimentation from detritic deposits to carbonate sediments. To cite this article: A. Ouali Mehadji et al., C. R. Geoscience 336 (2004).

Trace-fossil assemblages with a new ichnogenus in "spotted"

NASA Astrophysics Data System (ADS)

Šimo, Vladimír; Tomašových, Adam

2013-10-01

Highly-bioturbated "spotted" limestones and marls (Fleckenmergel-Fleckenkalk facies) of the Early Jurassic, which were deposited in broad and recurrent deep-shelf habitats of the Northern Tethys, are characterized by rare benthic carbonate-producing macroinvertebrates. To address this paradox, we analyse trace-fossil assemblages in a ~85 m-thick succession of Pliensbachian spotted deposits (Zliechov Basin, Western Carpathians). They are dominated by infaunal and semi-infaunal deposit-feeders, with 9 ichnogenera and pyritized tubes of the semi-infaunal foraminifer Bathysiphon, being dominated by Chondrites, Lamellaeichnus (new ichnogenus), and Teichichnus. Lamellaeichnus, represented by a horizontal basal cylindrical burrow and an upper row of stacked convex-up gutters, was produced by a mobile deposit-feeder inhabiting shallow tiers because it is crossed by most other trace fossils. We show that the spotty appearance of the deposits is generated by a mixture of (1) dark, organic-rich shallow- and deep-tier traces (TOC = 0.16-0.36), and (2) light grey, organic-poor mottled or structurless sediment (TOC = 0.09-0.22). The higher TOC in shallow-tier burrows of Lamellaeichnus demonstrates that uppermost sediment layers were affected by poor redox cycling. Such conditions imply a limited mixed-layer depth and inefficient nutrient recycling conditioned by hypoxic bottom-waters, allowed by poor circulation and high sedimentation rates in depocenters of the Zliechov Basin. Hypoxic conditions are further supported by (1) dominance of trace-fossils produced by infaunal deposit feeders, (2) high abundance of hypoxiatolerant agglutinated foraminifer Bathysiphon, and (3) high abundance of Chondrites with ~0.5 mm-sized branches. Oxygen-deficient bottom-conditions can thus simultaneously explain the rarity of benthic carbonate-producing macroinvertebrates and high standing abundance of tolerant soft-shell and agglutinated organisms in spotted deposits.

Benthic Macroinvertebrate Assemblages in the Near Coastal Zone of Lake Erie

EPA Science Inventory

Benthic macroinvertebrate assemblages have been used as indicators of ecological condition because their responses integrate localized environmental conditions of the sediments and overlying water. Assemblages of benthic invertebrates in the near coastal region are of particular...

The Middle Jurassic microflora from El Maghara N° 4 borehole, Northern Sinai, Egypt

NASA Astrophysics Data System (ADS)

Mohsen, Sayed Abdel

The coal bearing formation in El Maghara area, northern Sinai, yielded abundant, diverse and generally well preserved spores, pollen and marine microflora. The palynological analysis of the fine clastic sediments in this formation yielded (71) species related to (44) genera. Three different palynological assemblage zones can be distinguished. The sediments which contain lower and the upper assemblage zones bearing the coal seems, were deposited in non-marine (swamp) environment. In the middle assemblage zone few marine microflora can be identified, indicating a coastal near shore marine environment. Compared with other palynologic data obtained from Egypt and other countries, the three described assemblage zones belong to Middle Jurassic (Bathonian) age.

Revised age of deglaciation of Lake Emma based on new radiocarbon and macrofossil analyses

USGS Publications Warehouse

Elias, S.A.; Carrara, P.E.; Toolin, L.J.; Jull, A.J.T.

1991-01-01

Previous radiocarbon ages of detrital moss fragments in basal organic sediments of Lake Emma indicated that extensive deglaciation of the San Juan Mountains occurred prior to 14,900 yr B.P. (Carrara et al., 1984). Paleoecological analyses of insect and plant macrofossils from these basal sediments cast doubt on the reliability of the radiocarbon ages. Subsequent accelerator radiocarbon dates of insect fossils and wood fragments indicate an early Holocene age, rather than a late Pleistocene age, for the basal sediments of Lake Emma. These new radiocarbon ages suggest that by at least 10,000 yr B.P. deglaciation of the San Juan Mountains was complete. The insect and plant macrofossils from the basal organic sediments indicate a higher-than-present treeline during the early Holocene. The insect assemblages consisted of about 30% bark beetles, which contrasts markedly with the composition of insects from modern lake sediments and modern specimens collected in the Lake Emma cirque, in which bark beetles comprise only about 3% of the assemblages. In addition, in the fossil assemblages there were a number of flightless insect species (not subject to upslope transport by wind) indicative of coniferous forest environments. These insects were likewise absent in the modern assemblage. ?? 1991.

A comparative approach using ecotoxicological methods from single-species bioassays to model ecosystems.

PubMed

Haegerbaeumer, Arne; Höss, Sebastian; Ristau, Kai; Claus, Evelyn; Möhlenkamp, Christel; Heininger, Peter; Traunspurger, Walter

2016-12-01

Soft sediments are often hotspots of chemical contamination, and a thorough ecotoxicological assessment of this habitat can help to identify the causes of stress and to improve the health of the respective ecosystems. As an important component of the ecologically relevant meiobenthic fauna, nematodes can be used for sediment assessments, with various assay tools ranging from single-species toxicity tests to field studies. In the present study, microcosms containing sediment were used to investigate direct and indirect effects of zinc on natural nematode assemblages, and acute community toxicity tests considering only direct toxicity were conducted. The responses of the various freshwater nematode species in both approaches were compared with those of Caenorhabditis elegans, determined in standardized tests (ISO 10872). At a median lethal concentration (LC50) of 20 mg Zn/L, C. elegans represented the median susceptibility of 15 examined nematode species examined in the acute community toxicity tests. In the microcosms, Zn affected the nematodes dose-dependently, with changes in species composition first detected at 13 mg Zn/kg to 19 mg Zn/kg sediment dry weight. The observed species sensitivities in the microcosms corresponded better to field observations than to the results of the acute community toxicity tests. Environ Toxicol Chem 2016;35:2987-2997. © 2016 SETAC. © 2016 SETAC.

Weak and Habitat-Dependent Effects of Nutrient Pollution on Macrofaunal Communities of Southeast Australian Estuaries

PubMed Central

Nicastro, Andrea; Bishop, Melanie J.

2013-01-01

Among the impacts of coastal settlements to estuaries, nutrient pollution is often singled out as a leading cause of modification to the ecological communities of soft sediments. Through sampling of 48 sites, distributed among 16 estuaries of New South Wales, Australia, we tested the hypotheses that (1) anthropogenic nutrient loads would be a better predictor of macrofaunal communities than estuarine geomorphology or local sediment characteristics; and (2) local environmental context, as determined largely by sediment characteristics, would modify the relationship between nutrient loading and community composition. Contrary to the hypothesis, multivariate multiple regression analyses revealed that sediment grain size was the best predictor of macrofaunal assemblage composition. When samples were stratified according to median grain size, relationships between faunal communities and nitrogen loading and latitude emerged, but only among estuaries with sandier sediments. In these estuaries, capitellid and nereid polychaetes and chironomid larvae were the taxa that showed the strongest correlations with nutrient loading. Overall, this study failed to provide evidence of a differential relationship between diffuse nutrient enrichment and benthic macrofauna across a gradient of 7° of latitude and 4°C temperature. Nevertheless, as human population growth continues to place increasing pressure on southeast Australian estuaries, manipulative field studies examining when and where nutrient loading will lead to significant changes in estuarine community structure are needed. PMID:23799037

Fish Assemblages Associated with Natural and Anthropogenically-Modified Habitats in a Marine Embayment: Comparison of Baited Videos and Opera-House Traps

PubMed Central

Wakefield, Corey B.; Lewis, Paul D.; Coutts, Teresa B.; Fairclough, David V.; Langlois, Timothy J.

2013-01-01

Marine embayments and estuaries play an important role in the ecology and life history of many fish species. Cockburn Sound is one of a relative paucity of marine embayments on the west coast of Australia. Its sheltered waters and close proximity to a capital city have resulted in anthropogenic intrusion and extensive seascape modification. This study aimed to compare the sampling efficiencies of baited videos and fish traps in determining the relative abundance and diversity of temperate demersal fish species associated with naturally occurring (seagrass, limestone outcrops and soft sediment) and modified (rockwall and dredge channel) habitats in Cockburn Sound. Baited videos sampled a greater range of species in higher total and mean abundances than fish traps. This larger amount of data collected by baited videos allowed for greater discrimination of fish assemblages between habitats. The markedly higher diversity and abundances of fish associated with seagrass and limestone outcrops, and the fact that these habitats are very limited within Cockburn Sound, suggests they play an important role in the fish ecology of this embayment. Fish assemblages associated with modified habitats comprised a subset of species in lower abundances when compared to natural habitats with similar physical characteristics. This suggests modified habitats may not have provided the necessary resource requirements (e.g. shelter and/or diet) for some species, resulting in alterations to the natural trophic structure and interspecific interactions. Baited videos provided a more efficient and non-extractive method for comparing fish assemblages and habitat associations of smaller bodied species and juveniles in a turbid environment. PMID:23555847

Fish assemblages associated with natural and anthropogenically-modified habitats in a marine embayment: comparison of baited videos and opera-house traps.

PubMed

Wakefield, Corey B; Lewis, Paul D; Coutts, Teresa B; Fairclough, David V; Langlois, Timothy J

2013-01-01

Marine embayments and estuaries play an important role in the ecology and life history of many fish species. Cockburn Sound is one of a relative paucity of marine embayments on the west coast of Australia. Its sheltered waters and close proximity to a capital city have resulted in anthropogenic intrusion and extensive seascape modification. This study aimed to compare the sampling efficiencies of baited videos and fish traps in determining the relative abundance and diversity of temperate demersal fish species associated with naturally occurring (seagrass, limestone outcrops and soft sediment) and modified (rockwall and dredge channel) habitats in Cockburn Sound. Baited videos sampled a greater range of species in higher total and mean abundances than fish traps. This larger amount of data collected by baited videos allowed for greater discrimination of fish assemblages between habitats. The markedly higher diversity and abundances of fish associated with seagrass and limestone outcrops, and the fact that these habitats are very limited within Cockburn Sound, suggests they play an important role in the fish ecology of this embayment. Fish assemblages associated with modified habitats comprised a subset of species in lower abundances when compared to natural habitats with similar physical characteristics. This suggests modified habitats may not have provided the necessary resource requirements (e.g. shelter and/or diet) for some species, resulting in alterations to the natural trophic structure and interspecific interactions. Baited videos provided a more efficient and non-extractive method for comparing fish assemblages and habitat associations of smaller bodied species and juveniles in a turbid environment.

Polychlorinated Biphenyls as Probes of Biogeochemical Processes in Rivers

USGS Publications Warehouse

Fitzgerald, S.A.; Steuer, J.J.

1997-01-01

A field study was conducted to investigate the use of PCB (polychlorinated biphenyl) congener and homolog assemblages as tracers of biogeochemical processes in the Milwaukee and Manitowoc Rivers in southeastern Wisconsin from 1993 to 1995. PCB congeners in the dissolved and suspended particle phases, along with various algal indicators (algal carbon and pigments), were quantitated in the water seasonally. In addition, PCB congener assemblages were determined seasonally in surficial bed sediments. Biogeochemical processes investigated included: determination of the source of suspended particles and bottom sediments by comparison with known Aroclor mixtures, water-solid partitioning, and algal uptake of PCBs. Seasonal differences among the PCB assemblages were observed mainly in the dissolved phase, somewhat less in the suspended particulate phase, and not at all in the bed sediments.

Benthic macroinvertebrate assemblages in the US nearshore zone of Lake Erie, 2009: Status and linkages to landscape-derived stressors

EPA Science Inventory

Benthic macroinvertebrate assemblages have been used as indicators of ecological condition because their responses integrate localized environmental conditions of the sediments and overlying water. Assemblages of benthic invertebrates in the near coastal region are of particular...

Viral infections stimulate the metabolism and shape prokaryotic assemblages in submarine mud volcanoes.

PubMed

Corinaldesi, Cinzia; Dell'Anno, Antonio; Danovaro, Roberto

2012-06-01

Mud volcanoes are geological structures in the oceans that have key roles in the functioning of the global ecosystem. Information on the dynamics of benthic viruses and their interactions with prokaryotes in mud volcano ecosystems is still completely lacking. We investigated the impact of viral infection on the mortality and assemblage structure of benthic prokaryotes of five mud volcanoes in the Mediterranean Sea. Mud volcano sediments promote high rates of viral production (1.65-7.89 × 10(9) viruses g(-1) d(-1)), viral-induced prokaryotic mortality (VIPM) (33% cells killed per day) and heterotrophic prokaryotic production (3.0-8.3 μgC g(-1) d(-1)) when compared with sediments outside the mud volcano area. The viral shunt (that is, the microbial biomass converted into dissolved organic matter as a result of viral infection, and thus diverted away from higher trophic levels) provides 49 mgC m(-2) d(-1), thus fuelling the metabolism of uninfected prokaryotes and contributing to the total C budget. Bacteria are the dominant components of prokaryotic assemblages in surface sediments of mud volcanoes, whereas archaea dominate the subsurface sediment layers. Multivariate multiple regression analyses show that prokaryotic assemblage composition is not only dependant on the geochemical features and processes of mud volcano ecosystems but also on synergistic interactions between bottom-up (that is, trophic resources) and top-down (that is, VIPM) controlling factors. Overall, these findings highlight the significant role of the viral shunt in sustaining the metabolism of prokaryotes and shaping their assemblage structure in mud volcano sediments, and they provide new clues for our understanding of the functioning of cold-seep ecosystems.

Viral infections stimulate the metabolism and shape prokaryotic assemblages in submarine mud volcanoes

PubMed Central

Corinaldesi, Cinzia; Dell'Anno, Antonio; Danovaro, Roberto

2012-01-01

Mud volcanoes are geological structures in the oceans that have key roles in the functioning of the global ecosystem. Information on the dynamics of benthic viruses and their interactions with prokaryotes in mud volcano ecosystems is still completely lacking. We investigated the impact of viral infection on the mortality and assemblage structure of benthic prokaryotes of five mud volcanoes in the Mediterranean Sea. Mud volcano sediments promote high rates of viral production (1.65–7.89 × 109 viruses g−1 d−1), viral-induced prokaryotic mortality (VIPM) (33% cells killed per day) and heterotrophic prokaryotic production (3.0–8.3 μgC g−1 d−1) when compared with sediments outside the mud volcano area. The viral shunt (that is, the microbial biomass converted into dissolved organic matter as a result of viral infection, and thus diverted away from higher trophic levels) provides 49 mgC m−2 d−1, thus fuelling the metabolism of uninfected prokaryotes and contributing to the total C budget. Bacteria are the dominant components of prokaryotic assemblages in surface sediments of mud volcanoes, whereas archaea dominate the subsurface sediment layers. Multivariate multiple regression analyses show that prokaryotic assemblage composition is not only dependant on the geochemical features and processes of mud volcano ecosystems but also on synergistic interactions between bottom-up (that is, trophic resources) and top-down (that is, VIPM) controlling factors. Overall, these findings highlight the significant role of the viral shunt in sustaining the metabolism of prokaryotes and shaping their assemblage structure in mud volcano sediments, and they provide new clues for our understanding of the functioning of cold-seep ecosystems. PMID:22170423

Benthic Trophic Interactions in an Antarctic Shallow Water Ecosystem Affected by Recent Glacier Retreat.

PubMed

Pasotti, Francesca; Saravia, Leonardo Ariel; De Troch, Marleen; Tarantelli, Maria Soledad; Sahade, Ricardo; Vanreusel, Ann

2015-01-01

The western Antarctic Peninsula is experiencing strong environmental changes as a consequence of ongoing regional warming. Glaciers in the area are retreating rapidly and increased sediment-laden meltwater runoff threatens the benthic biodiversity at shallow depths. We identified three sites with a distinct glacier-retreat related history and different levels of glacial influence in the inner part of Potter Cove (King George Island, South Shetland Islands), a fjord-like embayment impacted since the 1950s by a tidewater glacier retreat. We compared the soft sediment meio- and macrofauna isotopic niche widths (δ13C and δ15N stable isotope analysis) at the three sites to investigate possible glacier retreat-related influences on benthic trophic interactions. The isotopic niches were locally shaped by the different degrees of glacier retreat-related disturbance within the Cove. Wider isotopic niche widths were found at the site that has become ice-free most recently, and narrower niches at the older ice-free sites. At an intermediate state of glacier retreat-related disturbance (e.g. via ice-growler scouring) species with different strategies could settle. The site at the earliest stage of post-retreat development was characterized by an assemblage with lower trophic redundancy. Generally, the isotopic niche widths increased with increasing size spectra of organisms within the community, excepting the youngest assemblage, where the pioneer colonizer meiofauna size class displayed the highest isotopic niche width. Meiofauna at all sites generally occupied positions in the isotopic space that suggested a detrital-pool food source and/or the presence of predatory taxa. In general ice scour and glacial impact appeared to play a two-fold role within the Cove: i) either stimulating trophic diversity by allowing continuous re-colonization of meiofaunal species or, ii) over time driving the benthic assemblages into a more compact trophic structure with increased connectedness and resource recycling.

Benthic Trophic Interactions in an Antarctic Shallow Water Ecosystem Affected by Recent Glacier Retreat

PubMed Central

Pasotti, Francesca; Saravia, Leonardo Ariel; De Troch, Marleen; Tarantelli, Maria Soledad; Sahade, Ricardo; Vanreusel, Ann

2015-01-01

The western Antarctic Peninsula is experiencing strong environmental changes as a consequence of ongoing regional warming. Glaciers in the area are retreating rapidly and increased sediment-laden meltwater runoff threatens the benthic biodiversity at shallow depths. We identified three sites with a distinct glacier-retreat related history and different levels of glacial influence in the inner part of Potter Cove (King George Island, South Shetland Islands), a fjord-like embayment impacted since the 1950s by a tidewater glacier retreat. We compared the soft sediment meio- and macrofauna isotopic niche widths (δ13C and δ15N stable isotope analysis) at the three sites to investigate possible glacier retreat-related influences on benthic trophic interactions. The isotopic niches were locally shaped by the different degrees of glacier retreat-related disturbance within the Cove. Wider isotopic niche widths were found at the site that has become ice-free most recently, and narrower niches at the older ice-free sites. At an intermediate state of glacier retreat-related disturbance (e.g. via ice-growler scouring) species with different strategies could settle. The site at the earliest stage of post-retreat development was characterized by an assemblage with lower trophic redundancy. Generally, the isotopic niche widths increased with increasing size spectra of organisms within the community, excepting the youngest assemblage, where the pioneer colonizer meiofauna size class displayed the highest isotopic niche width. Meiofauna at all sites generally occupied positions in the isotopic space that suggested a detrital-pool food source and/or the presence of predatory taxa. In general ice scour and glacial impact appeared to play a two-fold role within the Cove: i) either stimulating trophic diversity by allowing continuous re-colonization of meiofaunal species or, ii) over time driving the benthic assemblages into a more compact trophic structure with increased connectedness and resource recycling. PMID:26559062

Seismically-triggered soft-sediment deformation structures close to a major strike-slip fault system in the Eastern Alps (Hirlatz cave, Austria)

NASA Astrophysics Data System (ADS)

Salomon, Martina Lan; Grasemann, Bernhard; Plan, Lukas; Gier, Susanne; Schöpfer, Martin P. J.

2018-05-01

We investigate episodic soft-sediment deformation structures cross-cut by normal faults preserved in unlithified finely laminated calcite rich sediments in the Hirlatz cave in the Northern Calcareous Alps (Austria). These sediments comprise varve-like alternations of brighter carbonate/quartz rich layers, and darker clay mineral rich layers. The deformed sediments contain abundant millimeter to centimeter-scale soft-sediment structures (load casts, ball-and-pillow structures), sheet slumps (thrust faults and folds), erosive channels filled with slides and chaotic slumps. After deposition and soft-sediment deformation normal faults developed within the entire sedimentary succession, an event that probably correlates with an offset of c. 10 cm of the passage wall above the outcrop. Our major conclusions are: (i) The sediments have a glacial origin and were deposited in the Hirlatz cave under phreatic fluvio-lacustrine conditions. The deposition and the soft-sediment deformation occurred most likely during the last glaciation (i.e. around 25 ka ago); (ii) The liquefaction and formation of the soft-sediment structures in water-saturated stratified layers was triggered by episodic seismic events; (iii) The internally deformed sediments were later displaced by normal faults; (iv) A possible source for the seismic events is the active sinistral Salzach-Ennstal-Mariazeller-Puchberger (SEMP) strike-slip fault which is located about 10 km south of the outcrop and plays a major role in accommodating the extrusion of the Eastern Alps towards the Pannonian Basin. To our knowledge, the described structures are the first report of liquefaction and seismically induced soft-sediment deformations in Quaternary sediments in the Eastern Alps.

Clay mineralogy and source-to-sink transport processes of Changjiang River sediments in the estuarine and inner shelf areas of the East China Sea

NASA Astrophysics Data System (ADS)

Zhao, Yifei; Zou, Xinqing; Gao, Jianhua; Wang, Chenglong; Li, Yali; Yao, Yulong; Zhao, Wancang; Xu, Min

2018-02-01

We examined the source-to-sink sediment transport processes from the Changjiang River to the estuarine coastal shelf area by analyzing the clay mineral assemblages in suspended sediment samples from the Changjiang River catchment and surface samples from the estuarine coastal shelf area following the impoundment of the Three Gorges Dam (TGD) in 2003. The results indicate that the clay mineral compositions throughout the study area are dominated by illite, with less abundant kaolinite and chlorite and scarce smectite. The clay minerals display distinct differences in the tributaries and exhibit obvious changes in the trunk stream compared with the periods before 2003, and the source of sediment has largely shifted to the mid- to lower reaches of the river after 2003. Spatially, the clay mineral assemblages in the estuarine area define two compositionally distinct provinces. Province I covers the mud area of the Changjiang River estuary and the Zhe-Min coastal region, where sediment is primarily supplied by the Changjiang River. Province II includes part of the Changjiang River estuary and the southeastern portion of the study area, where the sediment is composed of terrestrial material from the Changjiang River and re-suspended material from the Huanghe River carried by the Jiangsu coastal current. Moreover, the other smaller rivers in China (including the Oujiang and Minjiang rivers of mainland China and the rivers of West Taiwan) also contribut sediments to the estuarine and inner shelf areas. In general, the clay mineral assemblages in the Changjiang River estuarine area are have mainly been controlled by sediment supplied from upstream of the Changjiang River tributaries. However, since the completion of the TGD in 2003, the mid- to downstream tributaries have become the main source of sediments from the Changjiang catchment into the East China Sea. These analyses further demonstrate that the coastal currents and the decrease in the sediment load of the river have the greatest impacts on the distribution and transport of clay minerals assemblages in the sediments.

Effects of offshore platforms on soft-bottom macro-benthic assemblages: a case study in a Mediterranean gas field.

PubMed

Terlizzi, Antonio; Bevilacqua, Stanislao; Scuderi, Danilo; Fiorentino, Dario; Guarnieri, Giuseppe; Giangrande, Adriana; Licciano, Margherita; Felline, Serena; Fraschetti, Simonetta

2008-07-01

The exploitation of fossil fuels in the Mediterranean Sea will likely lead to an increase in the number of offshore platforms, a recognized threat for marine biodiversity. To date, in this basin, few attempts have been made to assess the impact of offshore gas and oil platforms on the biodiversity of benthic assemblages. Here, we adopted a structured experimental design coupled with high taxonomic resolution to outline putative effects of gas platforms on soft-bottom macrofauna assemblages in the North Ionian Sea. The analysis was based on a total of 20,295 specimens of 405 taxa, almost entirely identified at species level. Multivariate and univariate analyses showed idiosyncratic patterns of assemblage change with increasing distance from the platforms. Potential reasons underlying such inconsistency are analyzed and the view that structured experimental monitoring is a crucial tool to quantify the extent and magnitude of potential threats and to provide sound baseline information on biodiversity patterns is supported.

The role of Argopecten purpuratus shells structuring the soft bottom community in shallow waters of southern Peru

NASA Astrophysics Data System (ADS)

Lomovasky, Betina J.; Gamero, Patricia A.; Romero, Leonardo; Firstater, Fausto N.; Gamarra Salazar, Alex; Hidalgo, Fernando; Tarazona, Juan; Iribarne, Oscar O.

2015-12-01

Accumulation of Argopecten purpuratus shells often occurs after El Niño events in shallow waters of Independencia Bay (14°17‧S-76°10‧W; Pisco, Peru). Here we experimentally investigate the effects of their shell accumulation on macrobenthos assemblages in soft bottom, shallow areas of the bay. A field experiment (from May 2006 to May 2007), including four treatments with different coverage levels of empty shells of A. purpuratus, were randomly arranged in: (1) areas devoid of shells ("Empty" treatment: experimental control), (2) 50% of the plot area covered with shells haphazardly distributed over the bottom ("medium" treatment), (3) 100% of the plot area covered with shells, forming a 10 cm valve layer ("full" treatment) and (4) "natural control". We found a total of 124 taxa throughout the experiment. Polychaetes, crustaceans and mollusks were the most abundant groups in "natural controls", dominated by the gastropod Nassarius gayi and the polychaetes Prionospio peruana, Platynereis bicanaliculata and Mediomastus branchiferus. The abundance of individuals (N) and the species richness (S) were higher in the "medium" treatment, but only in one month under positive sea bottom thermal anomalies. Similarity analysis (Bray-Curtis) showed that "natural control", "empty" and "full" treatments were more similar among them than the "medium" treatment. Multidimensional analysis showed no clear species association among treatments and a higher grouping among the samplings of Jun-06, Aug-06 and Nov-06. Our results also showed that the commercial crab Romaleon polyodon and the polyplacophora Tonicia elegans were positively affected by shell accumulations ("medium" treatment), while the limpet Fissurella crassa was negatively affected. Our study shows that directly by changing habitat structure or indirectly by changing sediment characteristics, the addition of scallop shells to the soft bottom can modify the macrobenthic assemblage; however, the seasonal oceanographic variability (e.g. upwelling, El Niño) could have stronger effects controlling this system than the presence of the shells itself.

Benthic and Plankton Foraminifers in Hydrothermally Active Zones of the Mid-Atlantic Ridge (MAR)

NASA Astrophysics Data System (ADS)

Khusid, T. A.; Os'kina, N. S.; Lukashina, N. P.; Gablina, I. F.; Libina, N. V.; Matul, A. G.

2018-01-01

Comparison of benthic foraminiferal assemblages from the core obtained within the Peterburgskoe ore field (Mid-Atlantic Ridge) and from the core taken five kilometers away from the ore field revealed evident differences in their composition, in the appearance of their shells, and also in the benthic-plankton species ratio. It was noted that the foraminiferal assemblage from the ore-bearing sediments of the Petersburg field was characterized by a higher relative content of benthic species and a large number of chemically altered and broken shells. The first occurrence of the species Osangularia umbonifera, which is able to exist in lowoxygen and CaCO3-undersaturated bottom waters at the boundary of biogenic sediments surrounding the ore field and in the ore-bearing sediments, was established. In the core section sampled beyond the ore field, the composition of foraminiferal assemblages differs insignificantly from typical oceanic ones.

Shallow marine event sedimentation in a volcanic arc-related setting: The Ordovician Suri Formation, Famatina range, northwest Argentina

USGS Publications Warehouse

Mangano, M.G.; Buatois, L.A.

1996-01-01

The Loma del Kilome??tro Member of the Lower Ordovician Suri Formation records arc-related shelf sedimentation in the Famatina Basin of northwest Argentina. Nine facies, grouped into three facies assemblages, are recognized. Facies assemblage 1 [massive and parallel-laminated mudstones (facies A) locally punctuated by normally graded or parallel-laminated silty sandstones (facies B] records deposition from suspension fall-out and episodic storm-induced turbidity currents in an outer shelf setting. Facies assemblage 2 [massive and parallel-laminated mudstones (facies A) interbedded with rippled-top very fine-grained sandstones (facies D)] is interpreted as the product of background sedimentation alternating with distal storm events in a middle shelf environment. Facies assemblage 3 [normally graded coarse to fine-grained sandstones (facies C); parallel-laminated to low angle cross-stratified sandstones (facies E); hummocky cross-stratified sandstones and siltstones (facies F); interstratified fine-grained sandstones and mudstones (facies G); massive muddy siltstones and sandstones (facies H); tuffaceous sandstones (facies I); and interbedded thin units of massive and parallel-laminated mudstones (facies A)] is thought to represent volcaniclastic mass flow and storm deposition coupled with subordinated suspension fall-out in an inner-shelf to lower-shoreface setting. The Loma del Kilo??metro Member records regressive-transgressive sedimentation in a storm- and mass flow-dominated high-gradient shelf. Volcano-tectonic activity was the important control on shelf morphology, while relative sea-level change influenced sedimentation. The lower part of the succession is attributed to mud blanketing during high stand and volcanic quiescence. Progradation of the inner shelf to lower shoreface facies assemblage in the middle part represents an abrupt basinward shoreline migration. An erosive-based, non-volcaniclastic, turbidite unit at the base of this package suggests a sea level fall. Pyroclastic detritus, andesites, and a non-volcanic terrain were eroded and their detritus was transported basinward and redeposited by sediment gravity flows during the low stand. The local coexistence of juvenile pyroclastic detritus and fossils suggests reworking of rare ash-falls. The upper part of the Loma del Kilo??metre Member records a transgression with no evidence of contemporaneous volcanism. Biostratinomic, paleoecologic, and ichnologic analyses support this paleoenvironmental interpretations and provide independent evidence for the dominance of episodic sedimentation in an arc-related shallow marine setting. Fossil concentrations were mainly formed by event processes, such as storms and volcaniclastic mass flows. High depositional rates inhibited formation of sediment-starved biogenic concentrations. Collectively, trace fossils belong to the Cruziana ichnofacies. Low diversity, scarcity, and presence of relatively simple forms indicate benthic activity under stressful conditions, most probably linked to high sedimentation rates. Contrasting sedimentary dynamics between 'normal shelves' and their volcaniclastic counterparts produce distinct and particular signatures in the stratigraphic record. Arc-related shelves are typified by event deposition with significant participation of sediment gravity flows, relatively high sedimentation rates, textural and mineralogical immaturity of sediments, scarcity and low diversity of trace fossils, and dominance of transported and reworked faunal assemblages genetically related to episodic processes.

The ‘Goldilocks’ effect: preservation bias in vertebrate track assemblages

PubMed Central

Falkingham, P. L.; Bates, K. T.; Margetts, L.; Manning, P. L.

2011-01-01

Finite-element analysis was used to investigate the extent of bias in the ichnological fossil record attributable to body mass. Virtual tracks were simulated for four dinosaur taxa of different sizes (Struthiomimus, Tyrannosaurus, Brachiosaurus and Edmontosaurus), in a range of substrate conditions. Outlines of autopodia were generated based upon osteology and published soft-tissue reconstructions. Loads were applied vertically to the feet equivalent to the weight of the animal, and distributed accordingly to fore- and hindlimbs where relevant. Ideal, semi-infinite elastic–plastic substrates displayed a ‘Goldilocks’ quality where only a narrow range of loads could produce tracks, given that small animals failed to indent the substrate, and larger animals would be unable to traverse the area without becoming mired. If a firm subsurface layer is assumed, a more complete assemblage is possible, though there is a strong bias towards larger, heavier animals. The depths of fossil tracks within an assemblage may indicate thicknesses of mechanically distinct substrate layers at the time of track formation, even when the lithified strata appear compositionally homogeneous. This work increases the effectiveness of using vertebrate tracks as palaeoenvironmental indicators in terms of inferring substrate conditions at the time of track formation. Additionally, simulated undertracks are examined, and it is shown that complex deformation beneath the foot may not be indicative of limb kinematics as has been previously interpreted, but instead ridges and undulations at the base of a track may be a function of sediment displacement vectors and pedal morphology. PMID:21233145

Living and dead foraminiferal assemblages from an active submarine canyon and surrounding sectors: the Gioia Canyon system (Tyrrhenian Sea, Southern Italy)

NASA Astrophysics Data System (ADS)

Letizia, Di Bella; Martina, Pierdomenico; Roberta, Porretta; Chiocci, Francesco Latino; Eleonora, Martorelli

2017-05-01

Living (rose Bengal stained) and dead benthic foraminiferal assemblages were studied from 23 stations located between 60 and 670 m depth along the Gioia Canyon and the adjacent continental shelf and slope (Southern Tyrrhenian Sea). The aim of this study is to investigate the relationships among sedimentary processes, hydrological patterns and benthic foraminiferal distribution, in a highly dynamic environment. High sedimentation rates on the shelf and occasional turbidity flows along the canyon, lead to unstable environmental conditions at the seafloor that reflect on the microbenthic community influencing faunal density, diversity, species composition and distribution inside the sediment. The foraminiferal distribution seems to be controlled by sedimentary processes, nutrient supply and organic matter recycling, which in turn are strongly controlled by the seasonal variability of riverine inputs and current dynamics in the Gulf of Gioia. From the inner shelf to the upper continental slope (550 m depth), the living foraminiferal assemblage is dominated by agglutinated taxa, likely favored by the high terrigenous supply. Frequent eutrophic taxa (Valvulineria bradyana and Nonionella turgida) tolerant high turbidity (Leptohalysis scottii,) and low oxygen (Bolivina spp. and Bulimina spp.) are recorded on the edge of the inner shelf, where channeling, deposition of coastal deposits and occasional sediment gravity flows occur. In the outer sector of the shelf a turnover of species is observed; L. scottii replaced by the opportunistic species Reophax scorpiurus, and taxa indicative of high energy conditions (Cassidulina spp.) become dominant in association with mesotrophic species like Globocassidulina subglobosa. Along the continental slope, lower sedimentation rates and more stable environmental conditions support richer and more diversified foraminiferal assemblage. The abundance of Bulimina marginata indicates eutrophic conditions at the shallower station (300 m depth) whereas at greater depth (550 m) typical open slope species dominate (Gyroidina spp., Uvigerina mediterranea). Within the Gioia Canyon, benthic assemblage indicates environmental conditions similar to those observed in other Mediterranean and extra-Mediterranean canyons. The assemblage is characterized by eutrophic and low oxygen taxa (Bolivina spp., Bulimina spp.) in relation to periodical fluxes of sediment and organic matter. Similar relationships arise from the analysis of dead foraminiferal assemblages. However, the comparison between living and dead faunas highlight compositional and structural changes related to taphonomic processes.

Small proportions of silt linked to distinct and predictable differences in marine macrofaunal assemblages on the continental shelf of the Pacific Northwest

NASA Astrophysics Data System (ADS)

Henkel, S. K.; Politano, K. K.

2017-07-01

Increasing interest in offshore development has motivated intensified efforts to map the seafloor for marine spatial planning. However, surficial geologic maps do not accurately represent habitats for various species groups of concern. This study used a bottom-up approach to integrate macrofaunal densities and benthic conditions on the Pacific Northwest shelf to identify macrofaunal assemblages and associated habitat features. Benthic cores and water-column profiles were collected from 137 stations from 50 to 110 m depth. Analyses grouping stations based on both similar species abundances and benthic conditions resulted in six broad habitats. Within the sampled depth and latitudinal range, sediment characteristics were the primary structuring variable. A major break in assemblages was detected between sediment that had less than 1% silt/clay and those containing more than 1% silt/clay. Assemblages differed primarily in the bivalve species present and secondarily in polychaete species. Within the greater than and less than 1% silt/clay habitats, further discretization of assemblages was based mostly on differing abundances of characteristic bivalves and polychaetes associated with differing median grain sizes, which did not correspond to traditional definitions of fine or medium sand. These data show that a bottom-up methodology is necessary to discern habitats for macrofauna and that site-specific physical sampling is necessary to predict macrofaunal assemblage composition. However, if detailed sediment characteristics are known, macrofaunal assemblages may be predicted without time-intensive biological sampling and processing. These results also indicate that seemingly small sedimentary changes due to offshore installations may have measureable effects on the relative abundances and even the species composition of macrofauna.

Benthic foraminiferal assemblages in Osaka Bay, southwestern Japan: Faunal changes over the last 50 years

USGS Publications Warehouse

Tsujimoto, Akira; Nomura, Ritsuo; Yasuhara, Moriaki; Yoshikawa, Shusaku

2006-01-01

Live benthic foraminiferal assemblages from surface sediment in Osaka Bay collected in 1999 were analyzed to characterize the distribution of the modern foraminiferal assemblages. Foraminiferal assemblages were compared with those of previous studies to document environmental changes in Osaka Bay over the past 50 years. Sixty-one species of foraminifera belonging to 37 genera were recognized from the 1999 surface sediment samples. An agglutinated assemblage containing Trochammina hadai and Eggerella advena is dominant in the inner part of the bay and is related to eutrophication. The foraminiferal assemblage in areas deeper than about 20 m is composed of Eggerella advena, Ammonia beccarii forma A, and Pseudorotalia gaimardii. This assemblage may be influenced by the large clockwise Okinose Circulation Current which extends throughout the western bay. Foraminiferal assemblages in Osaka Bay have changed dramatically during the last 50 years. The Trochammina hadai-Eggerella advena assemblage became established in the inner part of the bay, reflecting eutrophication that progressed from the 1960s through the 1970s. This assemblage became dominant in 1983, and typically dominated the inner part of the bay. From 1983 to 1999, however, the abundance of taxa belonging to this assemblage decreased greatly following implementation of 1973 Osaka City bylaws that restricted wastewater discharge. Changes in benthic assemblages such as the decrease of Ammonia beccarii forma A and increase of Eggerella advena have occurred in response to decreased incidence of red tides, and floral change in the species that cause these tides. The results of this study demonstrate that the abundance and distribution of benthic foraminifers in Osaka Bay are intimately related to environmental changes related to the urbanization of coastal areas. ?? by the Palaeontological Society of Japan.

Spatio-temporal biodiversity of soft bottom macrofaunal assemblages in shallow coastal waters exposed to episodic hypoxic events.

PubMed

Veas, Rodrigo; Hernández-Miranda, Eduardo; Quiñones, Renato A; Carrasco, Franklin D

2012-07-01

The Humboldt Current System (HCS) has one of the three most important oxygen minimum zones (OMZ) of the global ocean. Several studies have looked at the macrofaunal benthic assemblages inhabiting the continental shelf and shallow bays off central-southern Chile associated with low oxygen areas, but little is known about open coast macrofaunal communities within this zone, which are frequently subjected to the low oxygen conditions of Equatorial Subsurface Waters (ESSW). In order to assess local and mesoscale coastal macrofauna dynamics, the sampling area (ca. 40 linear km) was divided into seven local zones (Cobquecura, southern Cobquecura, northern Itata, Itata River mouth, external, southern Itata, and Coliumo). Eight oceanographic cruises were carried out between May 2006 and February 2008 covering 16 coastal sampling sites, between 36°07'S and 36°30'S. The macrofaunal assemblage was dominated by polychaetes, crustaceans, and mollusks. Our results suggest a high degree of temporal faunal stability on the mesoscale in soft bottom communities along the open coast, given the persistence of a faunal assemblage dominated by organisms tolerant of low oxygen conditions. While there is some local variability in community attributes, the main structuring factor for soft bottom communities in the shallow coastal area off central-southern Chile is the seasonal intrusion of low oxygen ESSW. Copyright © 2012 Elsevier Ltd. All rights reserved.

Temporal changes of a macrobenthic assemblage in harsh lagoon sediments

NASA Astrophysics Data System (ADS)

Como, Serena; Magni, Paolo

2009-08-01

An opportunistic macrobenthic assemblage was studied from 2001 to 2003 in a central area of the Cabras lagoon (western Sardinia, Italy), known to be affected by environmental disturbances (i.e. organic over-enrichment of sediments, and episodic events of hypoxia/anoxia and sulphide development). We identified recurrent seasonal changes in this macrobenthic assemblage, with a general impoverishment in summer and a recovery in winter/spring. The nereids Neanthes succinea and Hediste diversicolor were found to replace the spionid Polydora ciliata as the most dominant species in the summer for 3 consecutive years. Occasional, unsynchronized appearances of small-sized deposit feeders, such as Tubificidae, Capitella cf. capitata, chironomid larvae and Hydrobia spp., were observed in winter/spring. We suggest that these changes are driven by the interplay of environmental conditions (worse in summer) with numerous biotic factors. This includes different tolerance levels of taxa to low oxygen concentrations and sulphides, variability in larval supply and post-larval transport, as well as competition for space and food between and within different functional groups, and facilitation through animal bioturbation and sediment reoxidation. A conceptual model is proposed to demonstrate how environmental conditions and biotic interactions may control the benthic assemblage in such a harsh lagoon environment.

Morphology and palaeoenvironmental interpretation of deformed soft-sediment clasts: examples from within Late Pleistocene glacial outwash, Tempo Valley, Northern Ireland

NASA Astrophysics Data System (ADS)

Knight, Jasper

1999-10-01

Glacial outwash, deposited during deglaciation of the late Devensian ice sheet, is present as a flat-topped valley fill in the Tempo Valley on the southern flanks of the Fintona Hills, Northern Ireland. Sedimentologically, the outwash comprises well-sorted and interbedded rippled to massive sands which record distal deposition within a proglacial water body. Beds of ripple-drift cross-laminated sands contain deformed (folded and contorted) soft-sediment clasts which are composed mainly of silt and clay. The soft-sediment clasts were deformed prior to final deposition because clast a- b planes lie conformable to sand laminae which are undeformed. Morphological characteristics of the soft-sediment clasts, and their facies context, provide evidence for transport mechanisms, depositional environment, and processes of clast deformation. The soft-sediment clasts were transported into a proglacial water body by unidirectional water currents (˜1.5-2.5 m s -1). Sediment transport processes include sediment bypassing within the water column, a low bedload component, and grain flow activity during waning flow stages. The overall morphology of soft-sediment clasts records between 1 and 3 distinct phases of hydroplastic deformation prior to emplacement. The deformation phases are recognised on the basis of morphologically `unrolling' the superimposed folds of the soft-sediment clasts. Deformation structures (i.e. fold style) and direction of the principal stress axis relative to clast axes suggest that clasts were reoriented with respect to water flow direction following each deformation phase. Processes of deformation include folding-over of the clast along its b axis into two or more components, crumpling and abrasion of the outer margins of the b plane, and squashing of the clast c axis (some of which may be post-depositional deformation). The presence of silt- and clay-rich soft-sediment clasts within the outwash succession suggests that they were ripped-up from shallow and irregular pools on the glacier forefield, into which fine sediments accumulated after flood or meltwater events, and transported distally into a proglacial water body. These inferences based on facies evidence and styles of hydroplastic deformation impact on reconstructions of local palaeogeography, and the wider interpretation of similar soft-sediment clasts in the geological record.

A multiproxy study between the Río de la Plata and the adjacent South-western Atlantic inner shelf to assess the sediment footprint of river vs. marineinfluence

NASA Astrophysics Data System (ADS)

Burone, Leticia; Ortega, Leonardo; Franco-Fraguas, Paula; Mahiques, Michel; García-Rodriguez, Felipe; Venturini, Natalia; Marin, Yamandú; Brugnoli, Ernesto; Nagai, Renata; Muniz, Pablo; Bícego, Marcia; Figueira, Rubens; Salaroli, Alexandre

2013-03-01

Proxies of terrigenous versus marine input (Al and Ti, Fe/Ca and Ti/Ca ratios), origin of organic matter (δ13C, δ15N and C/N ratio), productivity (Corg; Nt; CaCO3, P, Ca, and Ba content; and Ba/Al and Ba/Ti ratios), hydrodynamics (grain size, mean diameter and sorting) and biological records of the main features of the environment (benthic foraminifera assemblage distribution) were used to assess the sediment footprint of river vs. marine influence along the salinity gradient between the Rio de la Plata (RdlP) estuary and the adjacent South Western Atlantic Shelf. These criteria permitted characterisation and interpretation of the sedimentary processes influencing transition between three known environments: tidal river, estuarine and marine zones. Increases in sand and clay content at the transition between tidal river and proper estuarine zones indicate resuspension/deposition processes associated with the maximum turbidity zone (MTZ). The MTZ was also characterised by an increase in mixed organic matter content indicated by stable carbon and nitrogen isotope values, an increment in productivity proxies (Corg, Nt and CaCO3) and the substitution of the Miliammina fusca assemblage (brackish environments) for the Ammonia tepida assemblage (estuarine environments). The transition between estuarine and marine environments was characterised by a sharp (up to 99%) increase in sand content, reflecting the progradation of modern RdlP sediments toward relict continental shelf sediment. C/N values typical of the marine environment, decreased trace element concentrations and the distribution of the Buliminella elegantissima assemblage (a more marine assemblage) also highlight the marine environment. This paper is particularly important as a tool both to better understand sedimentological dynamics in salinity fronts (along the shelf sediment of large estuaries) and to elaborate more precise palaeoenvironmental and palaeoceanographic reconstructions.

Shining Light on Benthic Macroalgae: Mechanisms of Complementarity in Layered Macroalgal Assemblages

PubMed Central

Tait, Leigh W.; Hawes, Ian; Schiel, David R.

2014-01-01

Phototrophs underpin most ecosystem processes, but to do this they need sufficient light. This critical resource, however, is compromised along many marine shores by increased loads of sediments and nutrients from degraded inland habitats. Increased attenuation of total irradiance within coastal water columns due to turbidity is known to reduce species' depth limits and affect the taxonomic structure and architecture of algal-dominated assemblages, but virtually no attention has been paid to the potential for changes in spectral quality of light energy to impact production dynamics. Pioneering studies over 70 years ago showed how different pigmentation of red, green and brown algae affected absorption spectra, action spectra, and photosynthetic efficiency across the PAR (photosynthetically active radiation) spectrum. Little of this, however, has found its way into ecological syntheses of the impacts of optically active contaminants on coastal macroalgal communities. Here we test the ability of macroalgal assemblages composed of multiple functional groups (including representatives from the chlorophyta, rhodophyta and phaeophyta) to use the total light resource, including different light wavelengths and examine the effects of suspended sediments on the penetration and spectral quality of light in coastal waters. We show that assemblages composed of multiple functional groups are better able to use light throughout the PAR spectrum. Macroalgal assemblages with four sub-canopy species were between 50–75% more productive than assemblages with only one or two sub-canopy species. Furthermore, attenuation of the PAR spectrum showed both a loss of quanta and a shift in spectral distribution with depth across coastal waters of different clarity, with consequences to productivity dynamics of diverse layered assemblages. The processes of light complementarity may help provide a mechanistic understanding of how altered turbidity affects macroalgal assemblages in coastal waters, which are increasingly threatened by diminishing light quantity and altered spectral distributions through sedimentation and eutrophication. PMID:25438045

Effects of a brine discharge over soft bottom Polychaeta assemblage.

PubMed

Del-Pilar-Ruso, Yoana; De-la-Ossa-Carretero, Jose Antonio; Giménez-Casalduero, Francisca; Sánchez-Lizaso, Jose Luis

2008-11-01

Desalination is a growing activity that has introduced a new impact, brine discharge, which may affect benthic communities. Although the role of polychaetes as indicators to assess organic pollution is well known, their tolerance to salinity changes has not been examined to such a great extent. The aim of this study was to examine the effect of brine discharge over soft bottom polychaete assemblage along the Alicante coast (Southeast Spain) over a two year period. Changes in the polychaete assemblage was analysed using univariate and multivariate techniques. We compared a transect in front of the discharge with two controls. At each transect we sampled at three depths (4, 10 and 15 m) during winter and summer. We have observed different sensitivity of polychaete families to brine discharges, Ampharetidae being the most sensitive, followed by Nephtyidae and Spionidae. Syllidae and Capitellidae showed some resistance initially, while Paraonidae proved to be a tolerant family.

The impacts of the Samarco mine tailing spill on the Rio Doce estuary, Eastern Brazil.

PubMed

Gomes, Luiz Eduardo de Oliveira; Correa, Lucas Barreto; Sá, Fabian; Neto, Renato Rodrigues; Bernardino, Angelo Fraga

2017-07-15

Over 50 million cubic meters of mining tailings were released in the Rio Doce basin after the collapse of the Fundão dam (Samarco) in November 2015. Predicting significant impacts on the Rio Doce estuary, we sampled sediments to investigate short-term impacts on the benthic assemblages and trace metal accumulation on estuarine sediments. With the arrival of the tailing plumes in the estuary, we detected a predominance of clay particles and increased trace metal concentrations of up to 5 times in some areas. The rapid sedimentation after the impact also impacted estuarine macrofaunal assemblages through loss surface-dwelling taxa. As expected, the impacts on benthic assemblages observed up to 3days after the arrival of tailings were not clearly associated with trace metal concentrations, but long-term effects need to be studied. We recommend that the high spatial variability within the estuary be considered in future impact assessment studies. Copyright © 2017 Elsevier Ltd. All rights reserved.

Quantitative distribution and functional groups of intertidal macrofaunal assemblages in Fildes Peninsula, King George Island, South Shetland Islands, Southern Ocean.

PubMed

Liu, Xiaoshou; Wang, Lu; Li, Shuai; Huo, Yuanzi; He, Peimin; Zhang, Zhinan

2015-10-15

To evaluate spatial distribution pattern of intertidal macrofauna, quantitative investigation was performed in January to February, 2013 around Fildes Peninsula, King George Island, South Shetland Islands. A total of 34 species were identified, which were dominated by Mollusca, Annelida and Arthropoda. CLUSTER analysis showed that macrofaunal assemblages at sand-bottom sites belonged to one group, which was dominated by Lumbricillus sp. and Kidderia subquadrata. Macrofaunal assemblages at gravel-bottom sites were divided into three groups while Nacella concinna was the dominant species at most sites. The highest values of biomass and Shannon-Wiener diversity index were found in gravel sediment and the highest value of abundance was in sand sediment of eastern coast. In terms of functional group, detritivorous and planktophagous groups had the highest values of abundance and biomass, respectively. Correlation analysis showed that macrofaunal abundance and biomass had significant positive correlations with contents of sediment chlorophyll a, phaeophorbide and organic matter. Copyright © 2015 Elsevier Ltd. All rights reserved.

Soft sediment deformation structures in the Maastrichtian Ajali Formation Western Flank of Anambra Basin, Southern Nigeria

NASA Astrophysics Data System (ADS)

Olabode, Solomon Ojo

2014-01-01

Soft sediment deformation structures were recognized in the Maastrichtian shallow marine wave to tide influenced regressive sediments of Ajali Formation in the western flank of Anambra basin, southern Nigerian. The soft sediment deformation structures were in association with cross bedded sands, clay and silt and show different morphological types. Two main types recognised are plastic deformations represented by different types of recumbent folds and injection structure represented by clastic dykes. Other structures in association with the plastic deformation structures include distorted convolute lamination, subsidence lobes, pillars, cusps and sand balls. These structures are interpreted to have been formed by liquefaction and fluidization mechanisms. The driving forces inferred include gravitational instabilities and hydraulic processes. Facies analysis, detailed morphologic study of the soft sediment deformation structures and previous tectonic history of the basin indicate that the main trigger agent for deformation is earthquake shock. The soft sediment deformation structures recognised in the western part of Anambra basin provide a continuous record of the tectonic processes that acted on the regressive Ajali Formation during the Maastrichtian.

Habitat shift in invading species: Zebra and quagga mussel population characteristics on shallow soft substrates

USGS Publications Warehouse

Berkman, P.A.; Garton, D.W.; Haltuch, M.A.; Kennedy, G.W.; Febo, L.R.

2000-01-01

Unexpected habitat innovations among invading species are illustrated by the expansion of dreissenid mussels across sedimentary environments in shallow water unlike the hard substrates where they are conventionally known. In this note, records of population characteristics of invading zebra (Dreissena polymorpha) and quagga (Dreissena bugensis) mussels from 1994 through 1998 are reported from shallow (less than 20 m) sedimentary habitats in western Lake Erie. Haphazard SCUBA collections of these invading species indicated that combined densities of zebra and quagga mussels ranged from 0 to 32,500 individuals per square meter between 1994 and 1998, with D. polymorpha comprising 75-100% of the assemblages. These mixed mussel populations, which were attached by byssal threads to each other and underlying sand-grain sediments, had size-frequency distributions that were typical of colonizing populations on hard substrates. Moreover, the presence of two mussel cohorts within the 1994 samples indicated that these species began expanding onto soft substrates not later than 1992, within 4 years of their initial invasion in western Lake Erie. Such historical data provide baselines for interpreting adaptive innovations, ecological interactions and habitat shifts among the two invading dreissenid mussel species in North America.

Effects of nutrient enrichment derived from fish farming activities on macroinvertebrate assemblages in a subtropical region of Hong Kong.

PubMed

Gao, Qin-Feng; Cheung, Kwok-Leung; Cheung, Siu-Gin; Shin, Paul K S

2005-01-01

To study the correlation between nutrient enrichment derived from fish farming activities and changes in macrobenthic assemblages, a one-year field study was conducted in Kau Sai Bay marine fish culture zone of Hong Kong. Bimonthly sediment samples were collected at six stations: two at the fish cages, two near the boundary of the fish culture area, and two reference sites further away from the culture area. Sediment physico-chemical characteristics in terms of silt/clay fraction, moisture content, total organic carbon (TOC), total Kjeldahl nitrogen (TKN) and total phosphorus (TP) were analyzed. The macrobenthos (>0.5 mm) present in the sediment were sorted, identified and enumerated. On average, TOC, TKN and TP levels at the fish cage stations were 82.8%, 128.5% and 1315.7% higher than those at the reference stations, respectively. As a result, the N:P molar ratio was greatly reduced from 8.75 at the reference stations to 1.83 at the fish cage stations. Univariate and multivariate analyses revealed that diversity of macrofauna was significantly reduced and community structure differed at the fish cage stations relative to the reference sites. The intermediary stations near the fish culture area showed a transitional state of disturbance. Faunal diversity was negatively correlated with nutrient level, reflecting the adverse impacts of nutrient enrichment derived from fish farming activities on the benthic assemblages. Whilst in subtropical Asia-Pacific trash fish is the major feed for fish culture resulting in a higher nutrient loading and nutrient ratio accumulated in the sediment beneath the fish rafts, the effects of nutrient enrichment on macrobenthic assemblages are comparable to that in temperate waters owing to relatively high sediment metabolism rate and smaller fish culture scale in Hong Kong.

The distribution and utility of sea-level indicators in Eurasian sub-Arctic salt marshes (White Sea, Russia).

NASA Astrophysics Data System (ADS)

Nikitina, Daria; Kemp, Andrew; Horton, Benjamin; Van, Christopher; Potapova, Marina; Culver, Stephen; Repkina, Tatyana; Hill, David

2017-04-01

We investigated the utility of foraminifera, diatoms and bulk-sediment geochemistry (δ13C and parameters measured by RockEval pyrolysis) as sea-level indicators in Eurasian sub-Arctic salt marshes. At three salt marshes in Dvina Bay (White Sea, Russia), we collected surface sediment samples along transects sequentially crossing sub-tidal, tidal-flat, salt-marsh and Taiga forest environments. Foraminifera formed bipartite assemblages, where elevations below mean high higher water (MHHW) were dominated by Miliammina spp. and elevations between MHHW and the highest occurrence of foraminifera were dominated by Jadammina macrescens and Balticammina pseudomacrescens. Both assemblages existed on all three transects and we conclude that foraminifera are sea-level indicators in Eurasian sub-Arctic salt marshes. Five, high-diversity groups of diatoms were identified and they displayed geographic variability among the study sites (<15 km apart). RockEval pyrolysis and δ13C measurements recognized two groups (clastic-dominated environments below MHHW and organic-rich environments above MHHW). Since one group included sub-tidal elevations and the other supra-tidal elevations, we conclude that the measured geochemical parameters do not meet the criteria for being stand-alone sea-level indicators. Core JT2012 captured a regressive sediment sequence of clastic, tidal-flat sediment overlain by salt-marsh organic silt and freshwater peat. The salt-marsh sediment accumulated at 2804 ± 52 years BP years before present and preserved foraminifera (J. macrescens and B. pseudomacrescens) with a high degree of analogy to modern assemblages indicating that relative sea level was 2.60 ± 0.47 m above present at this time. Diatoms confirm that marine influence decreased through time, but the lack of analogy between modern and core assemblages limits their utility as sea-level indicators in this setting.

Shelf gradients of echinoid assemblages from the Miocene of Sardinia

NASA Astrophysics Data System (ADS)

Nebelsick, James; Andrea, Mancosu

2017-04-01

Well exposed Miocene echinoid assemblages from Sardinia representing various environmental settings including both siliciclastics and carbonates have been studied with respect to reconstructing palaeoenvironmental conditions along a shelf gradient. The basis of this study includes 1) detailed logging of sedimentary facies in the field, 2) interpreting their behavior and life habits of the preserved echinoids by applying functional morphological reconstructions of the echinoid skeletons and comparing them to related Recent echinoid taxa, 3) quantifying taphonomic features of test preservation including predation, abrasion, fragmentation, encrustation and bioerosion, and finally 4) analyzing accompanying fauna and flora as well as trace fossils. The assemblages included clypeasteroid dominated assemblages in shallow water settings where often mass accumulations of sand dollars are present. Spatangoid dominated assemblages are found in more offshore settings where diversity is determined by varying burrowing depths, feeding strategies and resource partitioning accompanied by varying rates of bioturbation and episodes of sediment deposition by storms. Mixed assemblages also occur ranging from shallow to deeper water with varying substrates including sea grass, as well as coarser and finer sediments. Finally, deeper water monotypic assemblages are present in storm-dominated siliciclastic shelf environments including both regular and irregular echinoids. In general, echinoid presence is determined by the ecological preferences of the taxa involved, their propensities for gregarious behavior, the differential preservation potentials of the varied skeletal architectures present as well as sedimentary environment in which they occur.

Bottom-up control of macrobenthic communities in a guanotrophic coastal system.

PubMed

Signa, Geraldina; Mazzola, Antonio; Costa, Valentina; Vizzini, Salvatrice

2015-01-01

Soft bottom macrobenthic communities were studied seasonally in three coastal ponds (Marinello ponds, Italy) at increasing distances from a gull (Larus michahellis) colony to investigate the effect of seabird-induced eutrophication (i.e. guanotrophication) on macrobenthic fauna. We hypothesized that enhanced nutrient concentration and organic load caused by guano input significantly alter the trophic and sedimentological condition of ponds, affecting benthic fauna through a bottom-up control. The influence of a set of environmental features on macrobenthic assemblages was also tested. Overall, the lowest macrobenthic abundances and functional group diversity were found in deeper sites, especially in the pond characterised by severe guanotrophication, where the higher disturbance resulted in a decline in suspension feeders and carnivores in favour of deposit feeders. An increase in opportunistic/tolerant taxa (e.g. chironomid larvae and paraonids) and totally azoic sediments were also found as an effect of the harshest environmental conditions, resulting in a very poor ecological status. We conclude that macrobenthic assemblages of the Marinello coastal system display high spatial variability due to a synergistic effect of trophic status and the geomorphological features of the ponds. The macrobenthic response to guanotrophication, which was a clear decrease in abundance, diversity and trophic functional groups, was associated with the typical response to severe eutrophication, magnified by the geomorphological features.

Bottom-Up Control of Macrobenthic Communities in a Guanotrophic Coastal System

PubMed Central

Signa, Geraldina; Mazzola, Antonio; Costa, Valentina; Vizzini, Salvatrice

2015-01-01

Soft bottom macrobenthic communities were studied seasonally in three coastal ponds (Marinello ponds, Italy) at increasing distances from a gull (Larus michahellis) colony to investigate the effect of seabird-induced eutrophication (i.e. guanotrophication) on macrobenthic fauna. We hypothesized that enhanced nutrient concentration and organic load caused by guano input significantly alter the trophic and sedimentological condition of ponds, affecting benthic fauna through a bottom-up control. The influence of a set of environmental features on macrobenthic assemblages was also tested. Overall, the lowest macrobenthic abundances and functional group diversity were found in deeper sites, especially in the pond characterised by severe guanotrophication, where the higher disturbance resulted in a decline in suspension feeders and carnivores in favour of deposit feeders. An increase in opportunistic/tolerant taxa (e.g. chironomid larvae and paraonids) and totally azoic sediments were also found as an effect of the harshest environmental conditions, resulting in a very poor ecological status. We conclude that macrobenthic assemblages of the Marinello coastal system display high spatial variability due to a synergistic effect of trophic status and the geomorphological features of the ponds. The macrobenthic response to guanotrophication, which was a clear decrease in abundance, diversity and trophic functional groups, was associated with the typical response to severe eutrophication, magnified by the geomorphological features. PMID:25679400

Silicified sea life - Macrofauna and palaeoecology of the Neuburg Kieselerde Member (Cenomanian to Lower Turonian Wellheim Formation, Bavaria, southern Germany)

NASA Astrophysics Data System (ADS)

Schneider, Simon; Jager, Manfred; Kroh, Andreas; Mitterer, Agnes; Niebuhr, Birgit; Vodrazka, Radek; Wilmsen, Markus; Wood, Christopher J.; Zagorsk, Kamil

2013-12-01

Schneider, S., Jager, M., Kroh, A., Mitterer, A., Niebuhr, B., Vodražka, R., Wilmsen, M., Wood, C.J. and Zagoršek, K. 2013. Silicified sea life - Macrofauna and palaeoecology of the Neuburg Kieselerde Member (Cenomanian to Lower Turonian Wellheim Formation, Bavaria, southern Germany). Acta Geologica Polonica, 63(4), 555-610. Warszawa. With approximately 100 species, the invertebrate macrofauna of the Neuburg Kieselerde Member of the Wellheim Formation (Bavaria, southern Germany) is probably the most diverse fossil assemblage of the Danubian Cretaceous Group. Occurring as erosional relicts in post-depositional karst depressions, both the Cretaceous sediments and fossils have been silicified during diagenesis. The Neuburg Kieselerde Member, safely dated as Early Cenomanian to Early Turonian based on inoceramid bivalve biostratigraphy and sequence stratigraphy, preserves a predominantly soft-bottom community, which, however, is biased due to near-complete early diagenetic loss of aragonitic shells. The community is dominated by epifaunal and semi-infaunal bivalves as well as sponges that settled on various (bio-) clasts, and may widely be split into an early bivalve-echinoid assemblage and a succeeding sponge-brachiopod assemblage. In addition to these groups we document ichnofauna, polychaete tubes, nautilids and bryozoans. The fauna provides evidence of a shallow to moderately deep, calm, fully marine environment, which is interpreted as a largescale embayment herein. The fauna of the Neuburg Kieselerde Member is regarded as an important archive of lower Upper Cretaceous sea-life in the surroundings of the Mid-European Island.

Spatial segregation in eastern North Pacific skate assemblages.

PubMed

Bizzarro, Joseph J; Broms, Kristin M; Logsdon, Miles G; Ebert, David A; Yoklavich, Mary M; Kuhnz, Linda A; Summers, Adam P

2014-01-01

Skates (Rajiformes: Rajoidei) are common mesopredators in marine benthic communities. The spatial associations of individual species and the structure of assemblages are of considerable importance for effective monitoring and management of exploited skate populations. This study investigated the spatial associations of eastern North Pacific (ENP) skates in continental shelf and upper continental slope waters of two regions: central California and the western Gulf of Alaska. Long-term survey data were analyzed using GIS/spatial analysis techniques and regression models to determine distribution (by depth, temperature, and latitude/longitude) and relative abundance of the dominant species in each region. Submersible video data were incorporated for California to facilitate habitat association analysis. We addressed three main questions: 1) Are there regions of differential importance to skates?, 2) Are ENP skate assemblages spatially segregated?, and 3) When skates co-occur, do they differ in size? Skate populations were highly clustered in both regions, on scales of 10s of kilometers; however, high-density regions (i.e., hot spots) were segregated among species. Skate densities and frequencies of occurrence were substantially lower in Alaska as compared to California. Although skates are generally found on soft sediment habitats, Raja rhina exhibited the strongest association with mixed substrates, and R. stellulata catches were greatest on rocky reefs. Size segregation was evident in regions where species overlapped substantially in geographic and depth distribution (e.g., R. rhina and Bathyraja kincaidii off California; B. aleutica and B. interrupta in the Gulf of Alaska). Spatial niche differentiation in skates appears to be more pronounced than previously reported.

Spatial Segregation in Eastern North Pacific Skate Assemblages

PubMed Central

Bizzarro, Joseph J.; Broms, Kristin M.; Logsdon, Miles G.; Ebert, David A.; Yoklavich, Mary M.; Kuhnz, Linda A.; Summers, Adam P.

2014-01-01

Skates (Rajiformes: Rajoidei) are common mesopredators in marine benthic communities. The spatial associations of individual species and the structure of assemblages are of considerable importance for effective monitoring and management of exploited skate populations. This study investigated the spatial associations of eastern North Pacific (ENP) skates in continental shelf and upper continental slope waters of two regions: central California and the western Gulf of Alaska. Long-term survey data were analyzed using GIS/spatial analysis techniques and regression models to determine distribution (by depth, temperature, and latitude/longitude) and relative abundance of the dominant species in each region. Submersible video data were incorporated for California to facilitate habitat association analysis. We addressed three main questions: 1) Are there regions of differential importance to skates?, 2) Are ENP skate assemblages spatially segregated?, and 3) When skates co-occur, do they differ in size? Skate populations were highly clustered in both regions, on scales of 10s of kilometers; however, high-density regions (i.e., hot spots) were segregated among species. Skate densities and frequencies of occurrence were substantially lower in Alaska as compared to California. Although skates are generally found on soft sediment habitats, Raja rhina exhibited the strongest association with mixed substrates, and R. stellulata catches were greatest on rocky reefs. Size segregation was evident in regions where species overlapped substantially in geographic and depth distribution (e.g., R. rhina and Bathyraja kincaidii off California; B. aleutica and B. interrupta in the Gulf of Alaska). Spatial niche differentiation in skates appears to be more pronounced than previously reported. PMID:25329312

Biogenic disturbance determines invasion success in a subtidal soft-sediment system.

PubMed

Lohrer, Andrew M; Chiaroni, Luca D; Hewitt, Judi E; Thrush, Simon F

2008-05-01

Theoretically, disturbance and diversity can influence the success of invasive colonists if (1) resource limitation is a prime determinant of invasion success and (2) disturbance and diversity affect the availability of required resources. However, resource limitation is not of overriding importance in all systems, as exemplified by marine soft sediments, one of Earth's most widespread habitat types. Here, we tested the disturbance-invasion hypothesis in a marine soft-sediment system by altering rates of biogenic disturbance and tracking the natural colonization of plots by invasive species. Levels of sediment disturbance were controlled by manipulating densities of burrowing spatangoid urchins, the dominant biogenic sediment mixers in the system. Colonization success by two invasive species (a gobiid fish and a semelid bivalve) was greatest in plots with sediment disturbance rates < 500 cm(3) x m(-2) x d(-1), at the low end of the experimental disturbance gradient (0 to > 9000 cm(3) x m(-2) x d(-1)). Invasive colonization declined with increasing levels of sediment disturbance, counter to the disturbance-invasion hypothesis. Increased sediment disturbance by the urchins also reduced the richness and diversity of native macrofauna (particularly small, sedentary, surface feeders), though there was no evidence of increased availability of resources with increased disturbance that would have facilitated invasive colonization: sediment food resources (chlorophyll a and organic matter content) did not increase, and space and access to overlying water were not limited (low invertebrate abundance). Thus, our study revealed the importance of biogenic disturbance in promoting invasion resistance in a marine soft-sediment community, providing further evidence of the valuable role of bioturbation in soft-sediment systems (bioturbation also affects carbon processing, nutrient recycling, oxygen dynamics, benthic community structure, and so on.). Bioturbation rates are influenced by the presence and abundance of large burrowing species (like spatangoid urchins). Therefore, mass mortalities of large bioturbators could inflate invasion risk and alter other aspects of ecosystem performance in marine soft-sediment habitats.

Clay-mineral assemblages from some levels of K-118 drill core of Maha Sarakham evaporites, northeastern Thailand

NASA Astrophysics Data System (ADS)

Suwanich, Parkorn

Clay-mineral assemblages in Middle Clastic, Middle Salt, Lower Clastic, Potash Zone, and Lower Salt, totalling 13 samples from K-118 drill core, in the Maha Sarakham Formation, Khorat Basin, northeastern Thailand were studied. The clay-size particles were separated from the water-soluble salt by water leaching. Then the samples were leached again in the EDTA solution and separated into clay-size particles by using the timing sedimentation. The EDTA-clay residues were divided and analyzed by using the XRD and XRF method. The XRD peaks show that the major-clay minerals are chlorite, illite, and mixed-layer corrensite including traces of rectorite? and paragonite? The other clay-size particles are quartz and potassium feldspar. The XRF results indicate Mg-rich values and moderate MgAl atom ratio values in those clay minerals. The variable Fe, Na, and K contents in the clay-mineral assemblages can explain the environment of deposition compared to the positions of the samples from the core. Hypothetically, mineralogy and the chemistry of the residual assemblages strongly indicate that severe alteration and Mg-enrichment of normal clay detritus occurred in the evaporite environment through brine-sediment interaction. The various Mg-enrichment varies along the various members reflecting whether sedimentation is near or far from the hypersaline brine.

Storm-event-transport of urban-use pesticides to streams likely impairs invertebrate assemblages.

PubMed

Carpenter, Kurt D; Kuivila, Kathryn M; Hladik, Michelle L; Haluska, Tana; Cole, Michael B

2016-06-01

Insecticide use in urban areas results in the detection of these compounds in streams following stormwater runoff at concentrations likely to cause toxicity for stream invertebrates. In this 2013 study, stormwater runoff and streambed sediments were analyzed for 91 pesticides dissolved in water and 118 pesticides on sediment. Detections included 33 pesticides, including insecticides, fungicides, herbicides, degradates, and a synergist. Patterns in pesticide occurrence reveal transport of dissolved and sediment-bound pesticides, including pyrethroids, from upland areas through stormwater outfalls to receiving streams. Nearly all streams contained at least one insecticide at levels exceeding an aquatic-life benchmark, most often for bifenthrin and (or) fipronil. Multiple U.S. EPA benchmark or criterion exceedances occurred in 40 % of urban streams sampled. Bed sediment concentrations of bifenthrin were highly correlated (p < 0.001) with benthic invertebrate assemblages. Non-insects and tolerant invertebrates such as amphipods, flatworms, nematodes, and oligochaetes dominated streams with relatively high concentrations of bifenthrin in bed sediments, whereas insects, sensitive invertebrates, and mayflies were much more abundant at sites with no or low bifenthrin concentrations. The abundance of sensitive invertebrates, % EPT, and select mayfly taxa were strongly negatively correlated with organic-carbon normalized bifenthrin concentrations in streambed sediments. Our findings from western Clackamas County, Oregon (USA), expand upon previous research demonstrating the transport of pesticides from urban landscapes and linking impaired benthic invertebrate assemblages in urban streams with exposure to pyrethroid insecticides.

Storm-event-transport of urban-use pesticides to streams likely impairs invertebrate assemblages

USGS Publications Warehouse

Carpenter, Kurt; Kuivila, Kathryn; Hladik, Michelle; Haluska, Tana L.; Michael B. Cole,

2016-01-01

Insecticide use in urban areas results in the detection of these compounds in streams following stormwater runoff at concentrations likely to cause toxicity for stream invertebrates. In this 2013 study, stormwater runoff and streambed sediments were analyzed for 91 pesticides dissolved in water and 118 pesticides on sediment. Detections included 33 pesticides, including insecticides, fungicides, herbicides, degradates, and a synergist. Patterns in pesticide occurrence reveal transport of dissolved and sediment-bound pesticides, including pyrethroids, from upland areas through stormwater outfalls to receiving streams. Nearly all streams contained at least one insecticide at levels exceeding an aquatic-life benchmark, most often for bifenthrin and (or) fipronil. Multiple U.S. EPA benchmark or criterion exceedances occurred in 40 % of urban streams sampled. Bed sediment concentrations of bifenthrin were highly correlated (p < 0.001) with benthic invertebrate assemblages. Non-insects and tolerant invertebrates such as amphipods, flatworms, nematodes, and oligochaetes dominated streams with relatively high concentrations of bifenthrin in bed sediments, whereas insects, sensitive invertebrates, and mayflies were much more abundant at sites with no or low bifenthrin concentrations. The abundance of sensitive invertebrates, % EPT, and select mayfly taxa were strongly negatively correlated with organic-carbon normalized bifenthrin concentrations in streambed sediments. Our findings from western Clackamas County, Oregon (USA), expand upon previous research demonstrating the transport of pesticides from urban landscapes and linking impaired benthic invertebrate assemblages in urban streams with exposure to pyrethroid insecticides.

Diatom species abundance and morphologically-based dissolution proxies in coastal Southern Ocean assemblages

NASA Astrophysics Data System (ADS)

Warnock, Jonathan P.; Scherer, Reed P.

2015-07-01

Taphonomic processes alter diatom assemblages in sediments, thus potentially negatively impacting paleoclimate records at various rates across space, time, and taxa. However, quantitative taphonomic data is rarely included in diatom-based paleoenvironmental reconstructions and no objective standard exists for comparing diatom dissolution in sediments recovered from marine depositional settings, including the Southern Ocean's opal belt. Furthermore, identifying changes to diatom dissolution through time can provide insight into the efficiency of both upper water column nutrient recycling and the biological pump. This is significant in that reactive metal proxies (e.g. Al, Ti) in the sediments only account for post-depositional dissolution, not the water column where the majority of dissolution occurs. In order to assess the range of variability of responses to dissolution in a typical Southern Ocean diatom community and provide a quantitative guideline for assessing taphonomic variability in diatoms recovered from core material, a sediment trap sample was subjected to controlled, serial dissolution. By evaluating dissolution-induced changes to diatom species' relative abundance, three preservational categories of diatoms have been identified: gracile, intermediate, and robust. The relative abundances of these categories can be used to establish a preservation grade for diatom assemblages. However, changes to the relative abundances of diatom species in sediment samples may reflect taphonomic or ecological factors. In order to address this complication, relative abundance changes have been tied to dissolution-induced morphological change to the areolae of Fragilariopsis curta, a significant sea-ice indicator in Southern Ocean sediments. This correlation allows differentiation between gracile species loss to dissolution versus ecological factors or sediment winnowing. These results mirror a similar morphological dissolution index from a parallel study utilizing Fragilariopsis kerguelensis, suggesting that results are applicable to a broad spectrum of diatoms typically preserved in the sediments.

Distribution of heavy metals and foraminiferal assemblages in sediments of Biscayne Bay, Florida, USA

USGS Publications Warehouse

Carnahan, E.A.; Hoare, A.M.; Hallock, P.; Lidz, B.H.; Reich, C.D.

2008-01-01

Heavy-metal pollution is an issue of concern in estuaries influenced by agriculture, urban, and harbor activities. Foraminiferal assemblages have been shown to be effective indicators of pollution. Sediment samples (n = 110) from Biscayne Bay were analyzed for heavy metals, foraminiferal assemblages, and grain-size distribution. Highest Cu, Zn, Cr, Hg, Pb, and Ni concentrations were found closest to Miami and near the mouths of several canals along the western margin of the bay. Few samples exceeded limits of possible biological effects as defined by previous studies. Ammonia and Cribroelphidium, two known stress-tolerant genera, correlated positively with Cu, Zn, Hg, and Ni (r ??? 0.43). Symbiont-bearing foraminifers, Archaias, Laevipeneroplis, and Androsina, correlated negatively with Cu, Zn, Hg, and Ni (r ??? -0.26).

Benthic Foraminifera as bio-indicators of anthropogenic impacts in coastal environments: Acqua dei Corsari area case study (Palermo, Italy).

PubMed

Musco, Marianna; Cuttitta, Angela; Bicchi, Erica; Quinci, Enza Maria; Sprovieri, Mario; Tranchida, Giorgio; Giaramita, Luigi; Traina, Anna; Salvagio Manta, Daniela; Gherardi, Serena; Mercurio, Pietro; Siragusa, Angelo; Mazzola, Salvatore

2017-04-15

This study investigates living benthic foraminiferal assemblages as bio-indicators of anthropogenic activities in a coastal area within the Gulf of Palermo (Sicily, Italy), affected by industrial and urban activities, and evaluates the environmental quality through the calibration of a Tolerant Species index (%TS std ). Sediments from 6 stations were sampled along a bathymetric transect from the coast to offshore. Sediment grain size, TOC, major, minor and trace elements and polycyclic aromatic hydrocarbons (PAHs) were compared to benthic foraminiferal assemblages and species at each station. Diversity and density of benthic foraminiferal assemblages were not affected by the presence of pollutants, while tolerant species increased with organic (TOC and PAHs) or chemical (As and Pb) concentrations. Moreover, the calibration of the %TS std formula to >125μm foraminiferal assemblage, gives a detailed description of environmental quality along the transect, representing a good and sensitive tool to evaluate marine coastal environment. Copyright © 2017 Elsevier Ltd. All rights reserved.

Preserved Flora and Organics in Impact Melt Breccias

NASA Technical Reports Server (NTRS)

Schultz, P. H.; Harris, R. Scott; Clemett, S. J.; Thomas-Keprta, K. L.; Zarate, M.

2014-01-01

At least seven glass-bearing strata of varying ages occur at different horizons in the Pampean sediments of Argentina dating back to the Miocene. In a strict sense, these impact glasses are melt-matrix breccias composed of partially digested minerals clasts and basement fragments indicative of crater excavation. Ar-40/Ar-39 dating yield ages (+/- 2 sigma) of 6 +/- 2 Ka, 114 +/- 26 Ka, 230 +/- 30 Ka, 445 +/- 21 Ka, 3.27 +/- 0.08 Ma (near Mar del Plata = MdP), 5.28 +/- 0.04 Ma, and 9.21 +/- 0.08 Ma (near Chasico = CH) Where found in place (not reworked), these ages are consistent with the local stratigraphy and faunal assemblages. A striking property of some of these impact glasses is the encapsulation of preserved fragments of floral (and even soft-tissue faunal remains). Here we identify retained organics and describe a likely process of encapsulation and preservation.

Microbial Community Response to Simulated Petroleum Seepage in Caspian Sea Sediments

PubMed Central

Stagars, Marion H.; Mishra, Sonakshi; Treude, Tina; Amann, Rudolf; Knittel, Katrin

2017-01-01

Anaerobic microbial hydrocarbon degradation is a major biogeochemical process at marine seeps. Here we studied the response of the microbial community to petroleum seepage simulated for 190 days in a sediment core from the Caspian Sea using a sediment-oil-flow-through (SOFT) system. Untreated (without simulated petroleum seepage) and SOFT sediment microbial communities shared 43% bacterial genus-level 16S rRNA-based operational taxonomic units (OTU0.945) but shared only 23% archaeal OTU0.945. The community differed significantly between sediment layers. The detection of fourfold higher deltaproteobacterial cell numbers in SOFT than in untreated sediment at depths characterized by highest sulfate reduction rates and strongest decrease of gaseous and mid-chain alkane concentrations indicated a specific response of hydrocarbon-degrading Deltaproteobacteria. Based on an increase in specific CARD-FISH cell numbers, we suggest the following groups of sulfate-reducing bacteria to be likely responsible for the observed decrease in aliphatic and aromatic hydrocarbon concentration in SOFT sediments: clade SCA1 for propane and butane degradation, clade LCA2 for mid- to long-chain alkane degradation, clade Cyhx for cycloalkanes, pentane and hexane degradation, and relatives of Desulfobacula for toluene degradation. Highest numbers of archaea of the genus Methanosarcina were found in the methanogenic zone of the SOFT core where we detected preferential degradation of long-chain hydrocarbons. Sequencing of masD, a marker gene for alkane degradation encoding (1-methylalkyl)succinate synthase, revealed a low diversity in SOFT sediment with two abundant species-level MasD OTU0.96. PMID:28503173

Effect of nutrient pollution on dinoflagellate cyst assemblages across estuaries of the NW Atlantic

EPA Science Inventory

We analyzed surface sediments from 23 northeast USA estuaries, from Maine to Delaware, and nine estuaries from Prince Edward Island (PEI, Canada), to determine how dinoflagellate cyst assemblages varied with nutrient loading. Overall the abundance of cysts of heterotrophic dinofl...

The origin of modern agglutinated foraminiferal assemblages: evidence from a stratified fjord

NASA Astrophysics Data System (ADS)

Murray, John W.; Alve, Elisabeth; Cundy, Andrew

2003-11-01

Loch Etive, a silled 145 m deep fjord on the Scottish west coast, provides an example of modern benthic foraminiferal assemblages at intermediate depths (i.e., below the intertidal zone and above the CCD) consisting almost exclusively of organic-cemented agglutinated forms. Since such faunas from intermediate depths are rare in modern oceans but relatively common in the fossil record, the present study allows new insights into one kind of ancient environment for which there are few modern analogues. The strong dominance of agglutinated forms (both living and in some dead assemblages of foraminifera to the exclusion of calcareous taxa) is attributed to the unusual oceanographic conditions. These include a combination of restricted deep-water renewals and strong influence of freshwater which drains through large areas (relative to the size of the loch) of vegetated land. The result is calm bottom water conditions with commonly occurring oxygen depletion (although not anoxic), brackish water throughout the water column (salinity 28 in the deeper parts), and organic-rich (mostly terrestrially derived) sediments with geochemical properties, which, to a much larger degree than open marine ones, are controlled by local input. This environment supports low abundance and low diversity live assemblages, mainly restricted to the surface 1 cm of sediment. The dead assemblages show similar faunal characteristics, but the calcareous components are, due to carbonate dissolution, even more reduced. One of the calcareous species in Loch Etive is Elphidium albiumbilicatum. Its occurrence is the first record in British waters and it matches the previously suggested southern limit of its distribution. Analysis of a 90 cm long core representing sediments deposited over the past two centuries shows the presence of a calcareous dominated assemblage, including more marine species, with a higher diversity, in the lower part. This suggests that Loch Etive is in the process of going from a marine, to a more terrestrial dominated environment. The relatively high sedimentation rate (0.5 cm per yr), the apparent lack of smearing through bioturbation, and the presence of faunal changes in response to reduced marine influence over the past centuries, shows that Loch Etive has a good potential for performing high-resolution climatic studies.

Interannual variation in seasonal diatom dynamics - what information is preserved in an annual sediment record?

NASA Astrophysics Data System (ADS)

Maier, D. B.; Bigler, C.; Diehl, S.

2017-12-01

Diatom sediment assemblages are among the most important proxies for past climate and ecological condition reconstruction in aquatic environments, but the role of seasonality in the formation of diatom records is poorly understood. In this study we combine the diatom record of a varved sediment with year-round physico-chemical water column monitoring and the corresponding sequential sediment trap diatom record to disentangle the process information contained in a diatom sediment signal. The comparison of three consecutive annual diatom records indicates that the entire annual diatom sediment signal can be driven by winter air temperature induced timing of ice and snow melt and persistent under-ice stratification promoting an early diatom bloom under ice before spring lake over-turn. By contrast, in a year of late ice thinning when the chlorophyll a maximum occurred after spring lake over-turn, a more annually integrated diatom sediment signal was built buy a continuous diatom flux. The contrasting diatom records produced during years of different winter conditions have important implications for diatom based paleoecological reconstructions. Decadal records of sediment trap samples as well as long-term varved sediment records provide further support for the role of late winter and early spring weather conditions in determining sediment diatom assemblages.

Evolution of size-specific foraminiferal assemblages and the consequences for radiocarbon dating in bioturbated sediment

NASA Astrophysics Data System (ADS)

Costa, K.; Faith, E. S.; McManus, J. F.

2017-12-01

Deep-sea sediment mixing by bioturbation is ubiquitous on the seafloor, and it can be an important influence on the fidelity of paleoceanographic records. Bioturbation can be difficult to quantify, especially in the past, but diffusive models based on radioactive tracer profiles have provided a relatively successful approach. Stable isotope and radiocarbon data from five different foraminiferal species from sediment on the Juan de Fuca Ridge, Northeast Pacific, have previously identified age plateaus that correspond to peak foraminiferal abundances, related to assemblage shifts and carbonate preservation changes since the last glacial period. Here we present size-specific foraminiferal assemblages and over 100 radiocarbon dates to better constrain the effects of bioturbation on fossil chronometers. N. pachyderma is the dominant species in the 150-212µm while G. bulloides is the dominant species in all other size fractions (212-250 µm, 250-300 µm, 300-355 µm). The foraminiferal assemblage of 212-300 µm is found to be representative of the entire adult foraminiferal population >150 µm. Size-specific radiocarbon analyses on G. bulloides demonstrate that larger specimens are generally younger than smaller specimens, but all sizes are susceptible to abundance peak age plateaus. The young bias towards larger specimens may reflect their greater susceptibility to fragmentation during prolonged bioturbation, so that the influence of abundance peaks is shorter-lived in these size fractions. When foraminiferal abundance peaks are unavoidable, e.g. due to large shifts in carbonate preservation, we suggest that larger foraminiferal may provide a more accurate chronometer for sediment age.

Time to stop mucking around? Impacts of underwater photography on cryptobenthic fauna found in soft sediment habitats.

PubMed

De Brauwer, Maarten; Saunders, Benjamin J; Ambo-Rappe, Rohani; Jompa, Jamaluddin; McIlwain, Jennifer L; Harvey, Euan S

2018-07-15

Scuba diving tourism is a sustainable source of income for many coastal communities, but can have negative environmental impacts if not managed effectively. Diving on soft sediment habitats, typically referred to as 'muck diving', is a growing multi-million dollar industry with a strong focus on photographing cryptobenthic fauna. We assessed how the environmental impacts of scuba divers are affected by the activity they are engaged in while diving and the habitat they dive in. To do this, we observed 66 divers on coral reefs and soft sediment habitats in Indonesia and the Philippines. We found diver activity, specifically interacting with and photographing fauna, causes greater environmental disturbances than effects caused by certification level, gender, dive experience or age. Divers touched the substrate more often while diving on soft sediment habitats than on coral reefs, but this did not result in greater environmental damage on soft sediment sites. Divers had a higher impact on the substrate and touch animals more frequently when observing or photographing cryptobenthic fauna. When using dSLR-cameras, divers spent up to five times longer interacting with fauna. With the unknown, long-term impacts on cryptobenthic fauna or soft sediment habitats, and the increasing popularity of underwater photography, we argue for the introduction of a muck diving code of conduct. Copyright © 2018 Elsevier Ltd. All rights reserved.

Deciphering the record of short-term base-level changes in Gilbert-type deltas

NASA Astrophysics Data System (ADS)

Gobo, Katarina; Ghinassi, Massimiliano; Nemec, Wojciech

2016-04-01

The geometrical relationship of fluvial topset to subaqueous foreset in a Gilbert-type delta may be 'sigmoidal' (transitional) or 'oblique' (erosional), which is generally attributed - respectively - to a rise or fall of the delta shoreline's time-distance trajectory and considered to reflect base-level changes. However, since every episode of a base-level fall forces the fluvial distributary system to cut down, the delta-brink sigmoidal signature of a preceding base-level rise tends to be removed. The geometrical record of short-term base-level changes in a Gilbert-type delta thus tends to be obliterated by fluvial erosion. The issue addressed in this presentation is whether the fully-preserved foreset to bottomset deposits may serve as a key for deciphering the base-level history of an ancient Gilbert-type delta. Outcrop studies of Plio-Pleistocene Gilbert-type deltas at the southern margin of the Corinth Rift, Greece, reveal a genetic relationship between the delta-brink morphodynamics controlled by base level behaviour and the processes of subaqueous sediment dispersal on the delta slope and in its foot zone. The component facies are deposits of turbidity currents (whether slope-derived brief surges or longer-duration hyperpycnal flows), cohesionless debrisflows and loose-gravel debrisfalls. The development of sigmoidal delta-brink architecture appears to be accompanied by deposition of a debrite-dominated facies assemblage (DFA) of delta foreset beds, thought to form when the aggrading delta front tends to store sediment and undergoes discrete gravitational collapses. Development of oblique delta-brink architecture is accompanied by deposition of a turbidite-dominated facies assemblage (TFA) of foreset beds, which is thought to form when the delta-front accommodation decreases and the sediment carried by hyperpycnal effluent largely bypasses the front. The alternation of TFA and DFA facies assemblages in delta foreset is thus attributed to changes in delta-front accommodation driven by short-term base-level changes, with some accompanying inevitable 'noise' in the facies record due to the system autogenic variability and regional climatic fluctuations. Comparison of delta coeval foreset and toeset/bottomset deposits in a delta shows further a reverse pattern of reciprocal changes in facies assemblages, with the TFA assemblage of foreset deposits passing downdip into a DFA assemblage of delta-foot deposits, and the DFA assemblage of foreset deposits passing downdip into a TFA assemblage. This reverse reciprocal alternation of TFA and DFA facies assemblages is attributed to the delta-slope own morphodynamics. When the delta slope is dominated by deposition of debrisflows, only the most diluted turbulent flows and chute bypassing turbidity currents are reaching the delta-foot zone. When the delta slope is dominated by turbiditic sedimentation, larger chutes and gullies form - triggering and conveying debrisflows to the foot zone. These case studies as a whole shed a new light on the varying pattern of subaqueous sediment dispersal processes in an evolving Gilbert-type deltaic system and point to an the attractive possibility of the recognition of a 'hidden' record of base-level changes on the basis of detailed facies analysis.

Benthic foraminiferal assemblage formation: Theory and observation for the European Arctic margin

NASA Astrophysics Data System (ADS)

Loubere, Paul; Rayray, Shan

2016-09-01

We use theory and observation to determine how benthic foraminiferal populations living in a range of sedimentary microenvironments are translated into fossil assemblages along the continental margin of the European Arctic. We examine downcore stained (cell tracker green and rose Bengal) and total species shell abundances through the sediment mixing (bioturbation) zone. This, in combination with porewater geochemical measurements, allows us to establish zones of production and destruction for species' shells, and deduce how the fossil record is being generated by the living community. For many taxa, shell production is high in the upper, oxic, sedimentary layer, but destruction in this zone is also high. Hence, contribution to the fossil record is biased to more infaunal populations and species. Taxa producing near, or below, the anoxic boundary of the sediments are particularly important to the developing fossil record of the fjord environment. We find that taxon relative and absolute abundances change continuously through the biologically active sediment profile. This has implications for reconstructing paleoenvironments using benthic foraminiferal assemblages, and potentially for the geochemistry of individual fossil taxa.

Benthic foraminiferal assemblage formation: Theory and observation for the European Arctic Margin

NASA Astrophysics Data System (ADS)

Loubere, Paul; Rayray, Shan

2016-07-01

We use theory and observation to determine how benthic foraminiferal populations living in a range of sedimentary microenvironments are translated into fossil assemblages along the continental margin of the European Arctic. We examine downcore stained (cell tracker green and rose Bengal) and total species shell abundances through the sediment mixing (bioturbation) zone. This, in combination with porewater geochemical measurements, allows us to establish zones of production and destruction for species' shells, and deduce how the fossil record is being generated by the living community. For many taxa, shell production is high in the upper, oxic, sedimentary layer, but destruction in this zone is also high. Hence, contribution to the fossil record is biased to more infaunal populations and species. Taxa producing near, or below, the anoxic boundary of the sediments are particularly important to the developing fossil record of the fjord environment. We find that taxon relative and absolute abundances change continuously through the biologically active sediment profile. This has implications for reconstructing paleoenvironments using benthic foraminiferal assemblages, and potentially for the geochemistry of individual fossil taxa.

Sediment Microbial Enzyme Activity as an Indicator of Nutrient Limitation in the Great Rivers of the Upper Mississippi Basin

EPA Science Inventory

We compared extracellular enzyme activity (EEA) of microbial assemblages in river sediments at 447 sites along the Upper Mississippi, Missouri, and Ohio Rivers with sediment and water chemistry, atmospheric deposition of nitrogen and sulfate, and catchment land uses. The sites re...

Decapod assemblages associated with shallow macroalgal communities in the northwestern Alboran Sea: Microhabitat use and temporal variability

NASA Astrophysics Data System (ADS)

Mateo-Ramírez, Á.; Urra, J.; Rueda, J. L.; Marina, P.; García Raso, J. E.

2018-05-01

Decapod assemblages associated with algal fronds and the underlying substratum in two different photophilous macroalgal beds dominated by the brown algae Halopteris scoparia were studied in the northwestern Alboran Sea, between July 2007 and April 2008. A total of 35 decapod species were found in the macroalgal beds, most of them inhabiting both strata and with Hippolyte leptocerus, Pilumnus hirtellus, Sirpus zariquieyi, Acanthonyx lunulatus, Athanas nitescens and Achaeus gracilis as the dominant species. Assemblages on algal fronds and sediment displayed significant variations mainly due to differences in the abundance values of some dominant species (e.g. H. leptocerus) and/or the presence of certain species exclusively in one strata (e.g. Pisa nodipes in algal fronds, Atelecyclus rotundatus and Sicyonia carinata on the sediment stratum). Higher abundance, species richness and Shannon-Wiener diversity index values were registered in the sediment stratum, with a higher contribution of adults-large individuals than of juvenile-small individuals. The temporal variability of the studied assemblages showed maximum abundance values in November, when algal development is minimal. This decoupling between temporal patterns of decapod assemblages and macroalgal dynamic could be related to the lifestyles (recruitment events, movements of species between adjacent habitats and microhabitats) and trophic guilds of dominant species, fish predation pressure and the structural complexity of the habitat. A similar trophic structure was observed for both strata, however there was a predominance of grazers in the algae stratum and of predators and scavengers in the sediment stratum. The high diversity and abundance of predator decapods, the relatively balanced distribution of most trophic groups, and the overall high values of species richness and evenness, could indicate a healthy status of at least two of the eleven "Good Environmental Status" indicators (biodiversity and food webs) during the study period, according to the Marine Strategy Framework Directive.

Late Quaternary glaciation of the Upper Soca River Region (Southern Julian Alps, NW Slovenia)

USGS Publications Warehouse

Bavec, Milos; Tulaczyk, Slawek M.; Mahan, Shannon; Stock, Gregory M.

2004-01-01

Extent of Late Quaternary glaciers in the Upper Soc??a River Region (Southern Julian Alps, SE Europe) has been analyzed using a combination of geological mapping, glaciological modeling, and sediment dating (radiocarbon, U/Th series and Infrared Stimulated Luminescence-IRSL). Field investigations focused mainly on relatively well preserved Quaternary sequences in the Bovec Basin, an intramontane basin located SW of the Mediterranean/Black Sea divide and surrounded by mountain peaks reaching from approximately 2100 up to 2587 m a.s.l. Within the Basin we recognized two Late Quaternary sedimentary assemblages, which consist of the same facies association of diamictons, laminated lacustrine deposits and sorted fluvial sediments. Radiocarbon dating of the upper part of the lake sediments sequence (between 12790??85 and 5885??60 14C years b.p.) indicates that the younger sedimentary assemblage was deposited during the last glacial maximum and through early Holocene (Marine Isotope Stage 21, MIS 2-1). Sediment ages obtained for the older assemblage with U/Th and IRSL techniques (between 154.74??22.88 and 129.93??7.90 ka b.p. for selected samples) have large errors but both methods yield results consistent with deposition during the penultimate glacial-interglacial transition (MIS 6-5). Based on analyses of field data combined with glaciological modeling, we argue that both sediment complexes formed due to high sediment productivity spurred by paraglacial conditions with glaciers present in the uplands around the Bovec Basin but not extending down to the basin floor. Our study shows that the extent and intensity of direct glacial sedimentation by Late Quaternary glaciers in the region was previously significantly overestimated. ?? 2004 Elsevier B.V. All rights reserved.

Diatoms as a paleoproductivity proxy in the NW Iberian coastal upwelling system (NE Atlantic)

NASA Astrophysics Data System (ADS)

Zúñiga, Diana; Santos, Celia; Froján, María; Salgueiro, Emilia; Rufino, Marta M.; De la Granda, Francisco; Figueiras, Francisco G.; Castro, Carmen G.; Abrantes, Fátima

2017-03-01

The objective of the current work is to improve our understanding of how water column diatom's abundance and assemblage composition is seasonally transferred from the photic zone to seafloor sediments. To address this, we used a dataset derived from water column, sediment trap and surface sediment samples recovered in the NW Iberian coastal upwelling system. Diatom fluxes (2.2 (±5.6) 106 valves m-2 d-1) represented the majority of the siliceous microorganisms sinking out from the photic zone during all studied years and showed seasonal variability. Contrasting results between water column and sediment trap diatom abundances were found during downwelling periods, as shown by the unexpectedly high diatom export signals when diatom-derived primary production achieved their minimum levels. They were principally related to surface sediment remobilization and intense Minho and Douro river discharge that constitute an additional source of particulate matter to the inner continental shelf. In fact, contributions of allochthonous particles to the sinking material were confirmed by the significant increase of both benthic and freshwater diatoms in the sediment trap assemblage. In contrast, we found that most of the living diatom species blooming during highly productive upwelling periods were dissolved during sinking, and only those resistant to dissolution and the Chaetoceros and Leptocylindrus spp. resting spores were susceptible to being exported and buried. Furthermore, Chaetoceros spp. dominate during spring-early summer, when persistent northerly winds lead to the upwelling of nutrient-rich waters on the shelf, while Leptocylindrus spp. appear associated with late-summer upwelling relaxation, characterized by water column stratification and nutrient depletion. These findings evidence that the contributions of these diatom genera to the sediment's total marine diatom assemblage should allow for the reconstruction of different past upwelling regimes.

A sediment quality triad assessment of the impact of copper mine tailings disposal on the littoral sedimentary environment in the Atacama region of northern Chile.

PubMed

Lee, Matthew R; Correa, Juan A; Seed, Ray

2006-11-01

A sediment quality triad (SQT) assessment was made of the impact of copper mine tailings disposal on littoral meiofaunal assemblages in the Atacama region of northern Chile. This situation is unusual in that the disposal is direct into the high-energy coastal system and not via a river estuary or other low-energy environment. This situation also allows for the examination of the impact of copper mine tailings in the absence of confounding effects from other pollutants. The three components of the SQT were: 1. an analysis of the bioavailable metals in both the sedimentary porewater and the adjacent seawater, 2. a microcosm bioassay of both sediments and seawaters using meiofaunal assemblages, and 3. quantitative field samples of the meiofaunal assemblages. Twelve study sites with varying degrees of impact were used, including three reference sites. The study identified that both the meiofaunal assemblage densities and taxa diversities decrease with increasing levels of bioavailable copper, that the Foraminifera and Harpacticoida are sensitive to copper, and that otoplanid Turbellaria are often characteristic of impacted sites; tailings also have both chemical and physical impacts on the environment. In some cases the physical impact of tailings is more important in excluding some organisms e.g. the interstitial polychaete, Saccocirrus sonomacus, from a site than is their chemical impact.

ENVIRONMENTAL FACTORS INFLUENCING THE SPATIAL DISTRIBUTION OF DINOFLAGELLATE CYST ASSEMBLAGES IN SHALLOW LAGOONS IN SOUTHERN NEW ENGLAND (USA)

EPA Science Inventory

Surface sediment samples from 24 sites within eleven back-barrier lagoons of Rhode Island and Massachusetts (USA) contain abundant (200-6000 cysts cm-3) and diverse (up to 40 taxa) dinoflagellate cyst assemblages. The lowest cyst concentrations and diversity are observed in lagoo...

Environmental determinants of radiolarian assemblages in the western Pacific since the last deglaciation

NASA Astrophysics Data System (ADS)

Hernández-Almeida, I.; Cortese, G.; Yu, P.-S.; Chen, M.-T.; Kucera, M.

2017-08-01

Radiolarians are a very diverse microzooplanktonic group, often distributed in regionally restricted assemblages and responding to specific environmental factors. These properties of radiolarian assemblages make the group more conducive for the development and application of basin-wide ecological models. Here we use a new surface sediment data set from the western Pacific to demonstrate that ecological patterns derived from basin-wide open-ocean data sets cannot be transferred on semirestricted marginal seas. The data set consists of 160 surface sediment samples from three tropical-subtropical regions (East China Sea, South China Sea, and western Pacific), combining 54 new assemblage counts with taxonomically harmonized data from previous studies. Multivariate statistical analyses indicate that winter sea surface temperature at 10 m depth (SSTw) was the most significant environmental variable affecting the composition of radiolarian assemblages, allowing the development of an optimal calibration model (Locally Weighted-Weighted Averaging regression inverse deshrinking, R2cv = 0.88, root-mean-square error of prediction = 1.6°C). The dominant effect of SSTw on radiolarian assemblage composition in the western Pacific is attributed to the East Asian Winter Monsoon (EAWM), which is particularly strong in the marginal seas. To test the applicability of the calibration model on fossil radiolarian assemblages from the marginal seas, the calibration model was applied to two downcore records from the Okinawa Trough, covering the last 18 ka. We observe that these assemblages find most appropriate analogs among modern samples from the marginal basins (East China Sea and South China Sea). Downcore temperature reconstructions at both sites show similarities to known regional SST reconstructions, providing proof of concept for the new radiolarian-based SSTw calibration model.

Geochemical Responses to Anthropogenic and Natural Influences in Ebinur Lake Sediments of Arid Northwest China.

PubMed

Ma, Long; Wu, Jinglu; Abuduwaili, Jilili; Liu, Wen

2016-01-01

Geochemical concentrations were extracted for a short sediment core from Ebinur Lake, located in arid northwest China, and mathematical methods were used to demonstrate the complex pattern of the geochemical anomalies resulting from the temporal changes in natural and anthropogenic forces on the lake sediments. The first element assemblage (C1) (aluminum, potassium, iron, magnesium, beryllium, etc.) was predominantly terrigenous; among the assemblage, total phosphorus and titanium were generally consistent with aluminum except with regards to their surface sequences, which inferred the differences of source regions for terrigenous detrital material led to this change around ca. 2000AD. The second assemblage (C2) (calcium and strontium) was found to have a negative relationship with aluminum through a cluster analysis. The third assemblage (C3) included sodium and magnesium, which were influenced by the underwater lake environment and deposited in the Ebinur depression. The concentration ratio of C1/(C1+C2) was used as an indicator for denudation amount of detrital materials, which was supported by the values of magnetic susceptibility. The enrichment factors for heavy metals suggested that the influence of human activities on heavy-metal enrichment in Ebinur Lake region was not severe over the past century. Prior to the 1960s, geochemical indicators suggested a stable lacustrine environment with higher water levels. Beginning in the 1960s, high agricultural water demand resulted in rapid declines in lake water level, with subsequent increases of lake water salinity, as evidenced by enhanced sodium concentration in lake core sediments. During this period, anthropogenic activity also enhanced the intensity of weathering and the denudation of the Ebinur watershed.

Investigating hydrologic alteration as a mechanism of fish assemblage shifts in urbanizing streams

USGS Publications Warehouse

Roy, A.H.; Freeman, Mary C.; Freeman, B.J.; Wenger, S.J.; Ensign, W.E.; Meyer, J.L.

2005-01-01

Stream biota in urban and suburban settings are thought to be impaired by altered hydrology; however, it is unknown what aspects of the hydrograph alter fish assemblage structure and which fishes are most vulnerable to hydrologic alterations in small streams. We quantified hydrologic variables and fish assemblages in 30 small streams and their subcatchments (area 8–20 km2) in the Etowah River Catchment (Georgia, USA). We stratified streams and their subcatchments into 3 landcover categories based on imperviousness (<10%, 10–20%, >20% of subcatchment), and then estimated the degree of hydrologic alteration based on synoptic measurements of baseflow yield. We derived hydrologic variables from stage gauges at each study site for 1 y (January 2003–2004). Increased imperviousness was positively correlated with the frequency of storm events and rates of the rising and falling limb of the hydrograph (i.e., storm “flashiness”) during most seasons. Increased duration of low flows associated with imperviousness only occurred during the autumn low-flow period, and this measure corresponded with increased richness of lentic tolerant species. Altered storm flows in summer and autumn were related to decreased richness of endemic, cosmopolitan, and sensitive fish species, and decreased abundance of lentic tolerant species. Species predicted to be sensitive to urbanization, based on specific life-history or habitat requirements, also were related to stormflow variables and % fine bed sediment in riffles. Overall, hydrologic variables explained 22 to 66% of the variation in fish assemblage richness and abundance. Linkages between hydrologic alteration and fish assemblages were potentially complicated by contrasting effects of elevated flows on sediment delivery and scour, and mediating effects of high stream gradient on sediment delivery from elevated flows. However, stormwater management practices promoting natural hydrologic regimes are likely to reduce the impacts of catchment imperviousness on stream fish assemblages.

Temporal shifts in reef lagoon sediment composition, Discovery Bay, Jamaica

NASA Astrophysics Data System (ADS)

Perry, Christopher T.; Taylor, Kevin G.; Machent, Philip G.

2006-03-01

Discovery Bay, north Jamaica, forms a large (1.5 km wide), deep (up to 56 m) embayment that acts as a sink for reef-derived and lagoonal carbonate sediments. Since the mid-1960s, the bay has also provided a sink for inputs of bauxite sediment that are spilled during loading at a boat terminal constructed within Discovery Bay. Bauxite has accumulated across much of the southern section of the bay with surficial sediments presently composed of up to 35 weight% non-carbonate. Cores recovered from sites on the western side of the bay provide a stratigraphic record of this history of bauxite contamination across water depths from 5 to 25 m. The bauxite-influenced upper sediment horizons are clearly visible in each core from the distinctive red-brown colouration of the sediment. These sediments are composed of approximately 10% non-carbonate (bauxite) and have Fe contents of around 2-3000 μg/g (up to 7000 μg/g). The thickness of this upper bauxite-contaminated sequence increases down transect (approximately 18 cm in the shallowest core, to around 47 cm in the deepest core), and in each core overlies a sequence of 'clean' lagoon carbonates. These typically are poorly sorted carbonate sands with variable amounts of coral rubble. Down-core data on CaCO 3 and Fe content provide a chemical record of decreasing sediment contamination with depth, with the lower 'clean' carbonates composed of only around 2% non-carbonate and <700 μg/g Fe. Down-core sediment-constituent data also indicate significant changes in sediment production at the shallowest sites. At depths of 5 and 10 m, sediment assemblages have shifted from diverse assemblages of coral, mollusc, Amphiroa and Halimeda in the clean lagoon sands, to assemblages dominated by Halimeda and Amphiroa within the surficial sediments. At the deeper sites, no major down-core shifts in sediment constituents occur. These sites thus record a rather complex history of changes in sediment composition and chemistry. Clear shifts in chemistry and stratigraphy occur in all the cores and reflect progressive bauxite contamination in the near-surface horizons. These inputs, however, do not appear to have directly affected carbonate production, since the major constituent changes appear to be a response to more regional declines in coral community and reef status.

Heavy Minerals in Palaeotsunami Deposits: Assemblages, Spatial Distribution and Microtextural Imprints

NASA Astrophysics Data System (ADS)

Costa, P. J.; Andrade, C.; Cascalho, J.; Dawson, A. G.; Freitas, M. C.; Dawson, S.; Mahaney, W. C.

2013-12-01

The sedimentological record provides a database useful to characterize and evaluate recurrence of tsunamis, which contributes to assessing the vulnerability of any coastal area to this natural hazard. Thus, the enhancement of our ability to recognize signatures specific of tsunami activity imprinted in coastal sediments is of unquestionable interest. The aim of this study is to discuss and further contribute to the improvement of the characterization of (palaeo)tsunami deposits, and of their source materials. With that purpose the vertical and horizontal distribution of heavy mineral (HM) assemblages in sand-sized tsunamigenic deposits from six locations exhibiting a varied suite of coastal contexts and corresponding to three inundation events -(8200yrs BP - Scotland, 1500yrs BP - Scotland, AD 1755 - Portugal) were studied. In general, results from paleotsunami sediments show that site-specific effects prevent 'blind' extrapolations; instead, the bulk of the HM assemblages reflect local specificities related with the regional geology. In the Portuguese sediments (Martinhal, Boca do Rio and Salgados) ca. 90% of the non-opaque HM population consists of tourmaline, andalusite and staurolite, whereas amphiboles are dominant (> 90% of the assemblage) in the Scottish sediments (Scasta Voe, Basta Voe and Whale Firth). Principal Components Analyses revealed that the first 2 components explain more than 2/3 of the total variance found in each site. Horizontal and vertical variations in the HM were observed and especially in the heavier mineral species. Although, in some of the studied cases, the deposit was macroscopically massive, data on HM allowed the distinction of backwash layer(s), related with incorporation of inland materials. In what concerns sources, results indicate that palaeotsunami sediments share fewer compositional similarities with present-day inshore and offshore materials and more resemblances with dune and beach sediment, thus indicating these as the more likely source areas. In addition, preliminary results of SEM analysis of microtextural features imprinted in the surface of heavy minerals indicate an increase in the number of mechanical marks in the surface of palaeotsunami grains when compared with potential source materials (beach, dune, inshore and offshore samples). This work further reveals the potential to use heavy minerals as a complementary sedimentological tool in the study of palaeotsunami deposits.

Relationship between 'live' and dead benthic foraminiferal assemblages in the abyssal NE Atlantic

NASA Astrophysics Data System (ADS)

Stefanoudis, Paris V.; Bett, Brian J.; Gooday, Andrew J.

2017-03-01

Dead foraminiferal assemblages within the sediment mixed layer provide an integrated, time-averaged view of the foraminiferal fauna, while the relationship between dead and live assemblages reflects the population dynamics of different species together with taphonomic processes operating over the last few hundred years. Here, we analysed four samples for 'live' (Rose-Bengal-stained) and dead benthic foraminifera (0-1 cm sediment layer, >150 μm) from four sites in the area of the Porcupine Abyssal Plain Sustained Observatory (PAP-SO; NE Atlantic, 4850 m water depth). Two sites were located on abyssal hills and two on the adjacent abyssal plain. Our results indicate that the transition from live to dead benthic foraminiferal assemblages involved a dramatic loss of delicate agglutinated and organic-walled tests (e.g. Lagenammina, Nodellum, Reophax) with poor preservation potential, and to a lesser extent that of some relatively fragile calcareous tests (mostly miliolids), possibly a result of dissolution. Other processes, such as the transport of tests by bottom currents and predation, are unlikely to have substantially altered the composition of dead faunas. Positive live to dead ratios suggest that some species (notably Epistominella exigua and Bolivina spathulata) may have responded to recent phytodetritus input. Although the composition of live assemblages seemed to be influenced by seafloor topography (abyssal hills vs. plain), no such relation was found for dead assemblages. We suggest that PAP-SO fossil assemblages are likely to be comparable across topographically contrasting sites, and dominated by calcareous and some robust agglutinated forms with calcitic cement (e.g. Eggerella).

Spatio-temporal distribution patterns of the epibenthic community in the coastal waters of Suriname

NASA Astrophysics Data System (ADS)

Willems, Tomas; De Backer, Annelies; Wan Tong You, Kenneth; Vincx, Magda; Hostens, Kris

2015-10-01

This study aimed to characterize the spatio-temporal patterns of the epibenthic community in the coastal waters of Suriname. Data were collected on a (bi)monthly basis in 2012-2013 at 15 locations in the shallow (<40 m) coastal area, revealing three spatially distinct species assemblages, related to clear gradients in some environmental parameters. A species-poor coastal assemblage was discerned within the muddy, turbid-water zone (6-20 m depth), dominated by Atlantic seabob shrimp Xiphopenaeus kroyeri (Crustacea: Penaeoidea). Near the 30 m isobath, sediments were much coarser (median grain size on average 345±103 μm vs. 128±53 μm in the coastal assemblage) and water transparency was much higher (on average 7.6±3.5 m vs. 2.4±2.1 m in the coastal assemblage). In this zone, a diverse offshore assemblage was found, characterized by brittle stars (mainly Ophioderma brevispina and Ophiolepis elegans) and a variety of crabs, sea stars and hermit crabs. In between both zones, a transition assemblage was noted, with epibenthic species typically found in either the coastal or offshore assemblages, but mainly characterized by the absence of X. kroyeri. Although the epibenthic community was primarily structured in an on-offshore gradient related to depth, sediment grain size and sediment total organic carbon content, a longitudinal (west-east) gradient was apparent as well. The zones in the eastern part of the Suriname coastal shelf seemed to be more widely stretched along the on-offshore gradient. Although clear seasonal differences were noted in the environmental characteristics (e.g. dry vs. rainy season), this was not reflected in the epibenthic community structure. X. kroyeri reached very high densities (up to 1383 ind 1000 m-²) in the shallow coastal waters of Suriname. As X. kroyeri is increasingly exploited throughout its range, the current study provides the ecological context for its presence and abundance, which is crucial for an ecosystem approach and the sustainable management of this commercially important species and its habitat.

Long-term benthic infaunal monitoring at a deep-ocean dredged material disposal site off Northern California

NASA Astrophysics Data System (ADS)

Blake, James A.; Maciolek, Nancy J.; Ota, Allan Y.; Williams, Isabelle P.

2009-09-01

One hundred and thirty-five benthic infaunal samples were collected from the San Francisco Deep-Ocean Disposal Site (SF-DODS) over a 10-year period from January 1996 to September 2004. Each sample was 0.1 m 2, cut to a depth of 10 cm, and sieved through a 300-μm mesh. A total of 810 species of benthic invertebrates were identified; the majority of taxa (65.4%) new to science. The fauna represents a rich lower slope infaunal assemblage that rivals similarly studied locations in the western North Atlantic. No regional impact or degradation of benthic infauna due to dredged material disposal was detected. All reference stations and stations on the site boundary maintained high species richness and diversity during the monitoring period. Exceptions included an occasional sample with anomalously high numbers of one or two species that reduced the diversity and/or equitability. Within SF-DODS species richness and diversity were often reduced. Stations within the disposal site were recolonized by the same taxa that normally occurred in adjacent reference areas. Initial colonizers of fresh dredged material included spionid and paraonid polychaetes that were typical dominants at the site. At least one polychaete species, Ophelina sp. 1, sometimes colonized dredged materials containing coarse sand. One sample at Station 13, located in the middle of SF-DODS (September 2002), contained 57 species of benthic invertebrates, suggesting that colonization of fresh dredged material is rapid. It seems unlikely that larval dispersal and settlement account for this rapid recolonization; therefore it is postulated that adult organisms from adjacent areas move to the disturbed sites via boundary layer currents. The steep continental slope adjacent to SF-DODS is subject to turbidity flows and the resident fauna are likely pre-adapted to rapidly colonize disturbed sediments. Larval dispersal, especially by spionid polychaetes such as Prionospio delta, may also be important in colonizing newly deposited sediments. Subtle year-to-year shifts in faunal assemblages were evident at stations on the boundary of SF-DODS. At these stations species richness and diversity remained high, but numerically dominant taxa differed, possibly due to changes in sediment grain size associated with the dredged material. However, some year-to-year changes appeared to be regional in nature. Large epifaunal organisms such as the elasapoid holothurian Scotoplanes globosa appeared to be locally important in modifying surficial sediments: it moves through the sediment like a bulldozer, disturbing the surface and disrupting resident infauna as it ingests sediment. Other deposit-feeding holothurians such as Ypsilothuria bitentaculata were found throughout the study area including sediments with fresh dredged material. A long, narrow-bodied tube-like agglutinated foraminiferan of the genus Bathysiphon is commonly found in sediments containing dredged material. This foraminiferan is poorly understood, but may be opportunistic on soft dredged material.

Temporal dynamics of gastropod fauna on subtidal sandy sediments of the Ensenada de Baiona (NW Iberian Peninsula)

NASA Astrophysics Data System (ADS)

Moreira, J.; Aldea, C.; Troncoso, J. S.

2010-12-01

The temporal variation of the gastropod fauna inhabiting sandy sediments of the Ensenada de Baiona (Galicia, Spain) was studied at three subtidal sites from February 1996 to February 1997 by means of quantitative sampling. A total of 5,463 individuals representing 51 gastropod species and 22 families were found. The family Pyramidellidae was the most diverse in number of species (11 species), followed by Rissoidae and Trochidae (4 species each). The dogwhelk, Nassarius reticulatus, and the rissoid snail, Rissoa parva, were the numerically dominant species at the three studied sites; those and other abundant species showed their greatest densities by the end of summer and the beginning of autumn. In general, univariate measures of the assemblage (number of species, abundance, diversity and evenness) showed variations through time; greater values were recorded between summer and autumn depending on the site. Multivariate analyses done on abundance data showed certain seasonality in the evolution of the assemblage as expected for shallow subtidal sandy sediments at temperate latitudes; those seasonal changes were mostly related to variations in abundance of numerically dominant species. Although the measured sedimentary variables did not show significant correlations with faunal univariate parameters, sediment heterogeneity due to the presence of mats of Zostera marina L. and shells of dead bivalves might explain the differences in composition of the gastropod assemblage among sampling sites.

Rapid bacterial colonization of low-density polyethylene microplastics in coastal sediment microcosms.

PubMed

Harrison, Jesse P; Schratzberger, Michaela; Sapp, Melanie; Osborn, A Mark

2014-09-23

Synthetic microplastics (≤5-mm fragments) are emerging environmental contaminants that have been found to accumulate within coastal marine sediments worldwide. The ecological impacts and fate of microplastic debris are only beginning to be revealed, with previous research into these topics having primarily focused on higher organisms and/or pelagic environments. Despite recent research into plastic-associated microorganisms in seawater, the microbial colonization of microplastics in benthic habitats has not been studied. Therefore, we employed a 14-day microcosm experiment to investigate bacterial colonization of low-density polyethylene (LDPE) microplastics within three types of coastal marine sediment from Spurn Point, Humber Estuary, U.K. Bacterial attachment onto LDPE within sediments was demonstrated by scanning electron microscopy and catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH). Log-fold increases in the abundance of 16S rRNA genes from LDPE-associated bacteria occurred within 7 days with 16S rRNA gene numbers on LDPE surfaces differing significantly across sediment types, as shown by quantitative PCR. Terminal-restriction fragment length polymorphism (T-RFLP) analysis demonstrated rapid selection of LDPE-associated bacterial assemblages whose structure and composition differed significantly from those in surrounding sediments. Additionally, T-RFLP analysis revealed successional convergence of the LDPE-associated communities from the different sediments over the 14-day experiment. Sequencing of cloned 16S rRNA genes demonstrated that these communities were dominated after 14 days by the genera Arcobacter and Colwellia (totalling 84-93% of sequences). Attachment by Colwellia spp. onto LDPE within sediments was confirmed by CARD-FISH. These results demonstrate that bacteria within coastal marine sediments can rapidly colonize LDPE microplastics, with evidence for the successional formation of plastisphere-specific bacterial assemblages. Although the taxonomic compositions of these assemblages are likely to differ between marine sediments and the water column, both Arcobacter and Colwellia spp. have previously been affiliated with the degradation of hydrocarbon contaminants within low-temperature marine environments. Since hydrocarbon-degrading bacteria have also been discovered on plastic fragments in seawater, our data suggest that recruitment of hydrocarbonoclastic bacteria on microplastics is likely to represent a shared feature between both benthic and pelagic marine habitats.

Abrupt Changes in Bottom Water Benthic Foraminiferal Assemblages during Heinrich Events 1-4

NASA Astrophysics Data System (ADS)

Lazar, K.; Rashid, H.; Vermooten, M.; Mingqiu, D.

2017-12-01

The extent to which Heinrich iceberg-rafting events modify bottom water ecology resulting in changes in benthic foraminifera is poorly known. Here, we report centennial to millennial scale changes in the benthic foraminiferal assemblages from sediment core Pa96018-06 (47.75oN; 46.21oW). It was collected on the northern slope of the Flemish Pass of southern Labrador Sea and is bathed by Labrador Sea Water, one of the major components of the meridional overturning circulation of the Atlantic. Benthic foraminiferal assemblages were determined and numerous species identified. X-ray fluorescence (XRF) on the bulk sediments and iceberg-rafted detritus (IRD) in addition to oxygen isotopes on polar planktonic foraminiferal Neogloboquadrina pachyderma (sinistral) were used to identify the detrital carbonate-rich Heinrich iceberg-rafting events 1 to 4. Changes in the total numbers of Elphidium excavatum subsp. clavatum typically mirror changes in the total benthic population, yet the percentage of E. e. clavatum as part of the total sample increases through time. E. e. clavatum comprises approximately 60% of the benthic assemblage in H4, and steadily increases to 80% of the assemblage in H1 and H2. Total benthic foraminiferal numbers increase at the onset of each Heinrich event, with the two largest peaks in the entire record characterizing H2 and H3. In addition, the fine-scale feature in H1 suggests an initial decrease in the % E. e. clavatum (and total benthics) which then increased to 85% of the assemblage during the latter part of H1. Our data suggest that harsh living conditions prevailed during the initial phases of Heinrich events when the availability of meltwater and the deposition of fine-grained carbonate sediments were dominant. However, it appears that the ecology was favorable for E. e. clavatum during the latter phase of Heinrich events when the deposition of fine-grained sediments dissipated and the supply of meltwater was limited. These latter stages, especially of H2 and H3, suggest a unique and extreme environment in which E. e. clavatum flourished while many other foraminifers were unable to recover. Typical of extreme cold-water, low-salinity environments, E. e. clavatum is likely a useful benthic foraminifer for tracking extreme iceberg-rafting events as preserved in the sedimentary record.

Calcareous nannofossil assemblage changes across the Paleocene-Eocene thermal maximum: Evidence from a shelf setting

USGS Publications Warehouse

Self-Trail, Jean M.; Powars, David S.; Watkins, David K.; Wandless, Gregory A.

2012-01-01

Biotic response of calcareous nannoplankton to abrupt warming across the Paleocene/Eocene boundary reflects a primary response to climatically induced parameters including increased continental runoff of freshwater, global acidification of seawater, high sedimentation rates, and calcareous nannoplankton assemblage turnover. We identify ecophenotypic nannofossil species adapted to low pH conditions (Discoaster anartios, D. araneus, Rhomboaster spp.), excursion taxa adapted to the extremely warm climatic conditions (Bomolithus supremus and Coccolithus bownii), three species of the genus Toweius (T. serotinus, T. callosus, T. occultatus) adapted to warm, rather than cool, water conditions, opportunists adapted to high productivity conditions (Coronocyclus bramlettei, Neochiastozygus junctus), and species adapted to oligotropic and/or cool‐water conditions that went into refugium during the PETM (Zygrablithus bijugatus, Calcidiscus? parvicrucis and Chiasmolithus bidens). Discoaster anartios was adapted to meso- to eutrophic, rather than oligotrophic, conditions. Comparison of these data to previous work on sediments deposited on shelf settings suggests that local conditions such as high precipitation rates and possible increase in major storms such as hurricanes resulted in increased continental runoff and high sedimentation rates that affected assemblage response to the PETM.

Enrichment and shifts in macrobenthic assemblages in an offshore wind farm area in the Belgian part of the North Sea.

PubMed

Coates, Delphine A; Deschutter, Yana; Vincx, Magda; Vanaverbeke, Jan

2014-04-01

The growing development of offshore wind energy installations across the North Sea is producing new hard anthropogenic structures in the natural soft sediments, causing changes to the surrounding macrobenthos. The extent of modification in permeable sediments around a gravity based wind turbine in the Belgian part of the North Sea was investigated in the period 2011-2012, along four gradients (south-west, north-east, south-east, north-west). Sediment grain size significantly reduced from 427 μm at 200 m to 312 ± 3 μm at 15 m from the foundation along the south-west and north-west gradients. The organic matter content increased from 0.4 ± 0.01% at 100 m to 2.5 ± 0.9% at 15 m from the foundation. The observed changes in environmental characteristics triggered an increase in the macrobenthic density from 1390 ± 129 ind m⁻² at 200 m to 18 583 ± 6713 ind m⁻² at 15 m together with an enhanced diversity from 10 ± 2 at 200 m to 30 ± 5 species per sample at 15 m. Shifts in species dominance were also detected with a greater dominance of the ecosystem-engineer Lanice conchilega (16-25%) close to the foundation. This study suggests a viable prediction of the effects offshore wind farms could create to the naturally occurring macrobenthos on a large-scale. Copyright © 2013 Elsevier Ltd. All rights reserved.

Evaluation of Erosion Potential of Estuarine Sediments in NY/NJ Harbor (Impact of In-Situ Stabilization on the Remediation of Soft Sediments - A preamble to Erosion Testing and Evaluation)

DOT National Transportation Integrated Search

2011-09-01

The primary objective of the project are to perform a review of existing in-situ techniques of sediment erosion potential evaluation in contaminated "superfund" sites in the United States and those from Europe and Japan and the applicability of soft ...

Exposure of clownfish larvae to suspended sediment levels found on the Great Barrier Reef: Impacts on gill structure and microbiome

PubMed Central

Hess, Sybille; Wenger, Amelia S.; Ainsworth, Tracy D.; Rummer, Jodie L.

2015-01-01

Worldwide, increasing coastal development has played a major role in shaping coral reef species assemblages, but the mechanisms underpinning distribution patterns remain poorly understood. Recent research demonstrated delayed development in larval fishes exposed to suspended sediment, highlighting the need to further understand the interaction between suspended sediment as a stressor and energetically costly activities such as growth and development that are essential to support biological fitness. We examined the gill morphology and the gill microbiome in clownfish larvae (Amphiprion percula) exposed to suspended sediment concentrations (using Australian bentonite) commonly found on the inshore Great Barrier Reef. The gills of larvae exposed to 45 mg L−1 of suspended sediment had excessive mucous discharge and growth of protective cell layers, resulting in a 56% thicker gill epithelium compared to fish from the control group. Further, we found a shift from ‘healthy’ to pathogenic bacterial communities on the gills, which could increase the disease susceptibility of larvae. The impact of suspended sediments on larval gills may represent an underlying mechanism behind the distribution patterns of fish assemblages. Our findings underscore the necessity for future coastal development to consider adverse effects of suspended sediments on fish recruitment, and consequently fish populations and ecosystem health. PMID:26094624

Exposure of clownfish larvae to suspended sediment levels found on the Great Barrier Reef: Impacts on gill structure and microbiome.

PubMed

Hess, Sybille; Wenger, Amelia S; Ainsworth, Tracy D; Rummer, Jodie L

2015-06-22

Worldwide, increasing coastal development has played a major role in shaping coral reef species assemblages, but the mechanisms underpinning distribution patterns remain poorly understood. Recent research demonstrated delayed development in larval fishes exposed to suspended sediment, highlighting the need to further understand the interaction between suspended sediment as a stressor and energetically costly activities such as growth and development that are essential to support biological fitness. We examined the gill morphology and the gill microbiome in clownfish larvae (Amphiprion percula) exposed to suspended sediment concentrations (using Australian bentonite) commonly found on the inshore Great Barrier Reef. The gills of larvae exposed to 45 mg L(-1) of suspended sediment had excessive mucous discharge and growth of protective cell layers, resulting in a 56% thicker gill epithelium compared to fish from the control group. Further, we found a shift from 'healthy' to pathogenic bacterial communities on the gills, which could increase the disease susceptibility of larvae. The impact of suspended sediments on larval gills may represent an underlying mechanism behind the distribution patterns of fish assemblages. Our findings underscore the necessity for future coastal development to consider adverse effects of suspended sediments on fish recruitment, and consequently fish populations and ecosystem health.

Physical processes dominate in shaping invertebrate assemblages in reef-associated sediments of an exposed Hawaiian coast

USGS Publications Warehouse

DeFelice, R.C.; Parrish, J.D.

2001-01-01

The invertebrate assemblages in sediments bordering exposed fringing reefs at Hanalei Bay, Kauai, Hawaii, were examined during July to September 1994. Densities of invertebrate animals larger than 0.5 mm in sediments of the bay ranged from counts of 10 260 m-2 in the fine carbonate sands of the central bay to 870 m-2 in the habitat dominated by terrigenous silt near the reef edge close to the Hanalei river mouth. Similar sediment types supported broadly similar infaunal communities. Within the primarily carbonate sediments, mean grain size and wave exposure appear to have an important influence on the community. Taxonomic richness, number of individuals, and diversity showed significant negative relationships with exposure to wave energy (as estimated by sand ripple wavelength). The number of individuals was also significantly correlated with mean grain size. Overall, polychaetes and small crustaceans were numerically dominant among the major taxonomic groups investigated. Macrophagous and microphagous polychaetes had significant, but opposite, associations with grain size. In addition, microphagous polychaetes were significantly negatively correlated with wave exposure. No habitat variable measured could explain the variation in percent composition of crustaceans or echinoderms in the sedimentary habitats. The percentage of gastropods in the community was significantly negatively correlated with grain size, grain-size standard deviation and exposure, and positively with percent organic carbon. Bivalves were significantly positively associated with depth and grain size. These strong relationships imply that, in Hanalei Bay, physical processes are especially important in influencing assemblage structure, and that community structure and composition vary continuously along environmental gradients.

Macroinvertebrate Assemblage Response to Contaminated Sediment Remediation in a Lacustuary System

EPA Science Inventory

Degradation of benthos is a common beneficial use impairments (BUI) at Great Lakes Areas of Concern (AOCs), including the Maumee River, northeastern Ohio. Ottawa River is part of the Maumee River AOC, and has been altered by urban and industrial activities. Contaminated sediment ...

Recognising triggers for soft-sediment deformation: Current understanding and future directions

NASA Astrophysics Data System (ADS)

Owen, Geraint; Moretti, Massimo; Alfaro, Pedro

2011-04-01

Most of the 16 papers in this special issue were presented at a session entitled "The recognition of trigger mechanisms for soft-sediment deformation" at the 27th IAS Meeting of Sedimentology in Alghero, Sardinia, Italy, which took place from 20th-23rd September 2009. They describe soft-sediment deformation structures that range widely in morphology, age, depositional environment and tectonic setting. In their interpretations, the authors have been asked to focus on identifying the agent that triggered deformation. Our aims in this introductory overview are to: (1) review the definition and scope of soft-sediment deformation; (2) clarify the significance and role of the trigger; (3) set the contributions in context and summarise their findings; and (4) discuss strategies for reliably identifying triggers and make recommendations for future study of this widespread and significant category of sedimentary structures. We recommend a three-stage approach to trigger recognition, combining the assessment of facies, potential triggers, and available criteria. This focus on the trigger for deformation distinguishes this collection of papers on soft-sediment deformation from other important collections, notably those edited by Jones and Preston (1987), Maltman (1994), Maltman et al. (2000), Shiki et al. (2000), Ettensohn et al. (2002b), Van Rensbergen et al. (2003) and Storti and Vannucchi (2007).

Water and sediment temperatures at mussel beds in the upper Mississippi River basin

USGS Publications Warehouse

Newton, Teresa J.; Sauer, Jennifer; Karns, Byron

2013-01-01

Native freshwater mussels are in global decline and urgently need protection and conservation. Declines in the abundance and diversity of North American mussels have been attributed to human activities that cause pollution, waterquality degradation, and habitat destruction. Recent studies suggest that effects of climate change may also endanger native mussel assemblages, as many mussel species are living close to their upper thermal tolerances. Adult and juvenile mussels spend a large fraction of their lives burrowed into sediments of rivers and lakes. Our objective was to measure surface water and sediment temperatures at known mussel beds in the Upper Mississippi (UMR) and St. Croix (SCR) rivers to estimate the potential for sediments to serve as thermal refugia. Across four mussel beds in the UMR and SCR, surface waters were generally warmer than sediments in summer, and were cooler than sediments in winter. This suggests that sediments may act as a thermal buffer for mussels in these large rivers. Although the magnitude of this effect was usually <3.0°C, sediments were up to 7.5°C cooler at one site in May, suggesting site-specific variation in the ability of sediments to act as thermal buffers. Sediment temperatures in the UMR exceeded those shown to cause mortality in laboratory studies. These data suggest that elevated water temperatures resulting from global warming, thermal discharges, water extraction, and/or droughts have the potential to adversely affect native mussel assemblages.

Paleolimnological records of nitrogen deposition in shallow, high-elevation lakes of Grand Teton National Park, Wyoming, USA

USGS Publications Warehouse

Spaulding, Sarah A.; Otu, Megan K.; Wolfe, Alexander P.; Baron, Jill S.

2015-01-01

Reactive nitrogen (Nr) from anthropogenic sources has been altering ecosystem function in lakes of the Rocky Mountains, other regions of western North America, and the Arctic over recent decades. The response of biota in shallow lakes to atmospheric deposition of Nr, however, has not been considered. Benthic algae are dominant in shallow, high-elevation lakes and are less sensitive to nutrient inputs than planktonic algae. Because the benthos is typically more nutrient rich than the water column, shallow lakes are not expected to show evidence of anthropogenic Nr. In this study, we assessed sedimentary evidence for regional Nr deposition, sediment chronology, and the nature of algal community response in five shallow, high-elevation lakes in Grand Teton National Park (GRTE). Over 140 diatom taxa were identified from the sediments, with a relatively high species richness of taxa characteristic of oligotrophic conditions. The diatom assemblages were dominated by benthic taxa, especially motile taxa. The GRTE lakes demonstrate assemblage-wide shifts in diatoms, including 1) synchronous and significant assemblage changes centered on ~1960 AD; 2) pre-1960 assemblages differed significantly from post-1960 assemblages; 3) pre-1960 diatom assemblages fluctuated randomly, whereas post- 1960 assemblages showed directional change; 4) changes in δ15N signatures were correlated with diatom community composition. These results demonstrate recent changes in shallow high18 elevation lakes that are most correlated with anthropogenic Nr. It is also possible, however, that the combined effect of Nr deposition and warming is accelerating species shifts in benthic diatoms. While uncertainties remain about the potential synergy of Nr deposition and warming, this study adds shallow lakes to the growing list of impacted high-elevation localities in western North America.

Distinct Microbial Assemblage Structure and Archaeal Diversity in Sediments of Arctic Thermokarst Lakes Differing in Methane Sources.

PubMed

Matheus Carnevali, Paula B; Herbold, Craig W; Hand, Kevin P; Priscu, John C; Murray, Alison E

2018-01-01

Developing a microbial ecological understanding of Arctic thermokarst lake sediments in a geochemical context is an essential first step toward comprehending the contributions of these systems to greenhouse gas emissions, and understanding how they may shift as a result of long term changes in climate. In light of this, we set out to study microbial diversity and structure in sediments from four shallow thermokarst lakes in the Arctic Coastal Plain of Alaska. Sediments from one of these lakes (Sukok) emit methane (CH 4 ) of thermogenic origin, as expected for an area with natural gas reserves. However, sediments from a lake 10 km to the North West (Siqlukaq) produce CH 4 of biogenic origin. Sukok and Siqlukaq were chosen among the four lakes surveyed to test the hypothesis that active CH 4 -producing organisms (methanogens) would reflect the distribution of CH 4 gas levels in the sediments. We first examined the structure of the little known microbial community inhabiting the thaw bulb of arctic thermokarst lakes near Barrow, AK. Molecular approaches (PCR-DGGE and iTag sequencing) targeting the SSU rRNA gene and rRNA molecule were used to profile diversity, assemblage structure, and identify potentially active members of the microbial assemblages. Overall, the potentially active (rRNA dominant) fraction included taxa that have also been detected in other permafrost environments (e.g., Bacteroidetes, Actinobacteria, Nitrospirae, Chloroflexi, and others). In addition, Siqlukaq sediments were unique compared to the other sites, in that they harbored CH 4 -cycling organisms (i.e., methanogenic Archaea and methanotrophic Bacteria), as well as bacteria potentially involved in N cycling (e.g., Nitrospirae) whereas Sukok sediments were dominated by taxa typically involved in photosynthesis and biogeochemical sulfur (S) transformations. This study revealed a high degree of archaeal phylogenetic diversity in addition to CH 4 -producing archaea, which spanned nearly the phylogenetic extent of currently recognized Archaea phyla (e.g., Euryarchaeota, Bathyarchaeota, Thaumarchaeota, Woesearchaeota, Pacearchaeota, and others). Together these results shed light on expansive bacterial and archaeal diversity in Arctic thermokarst lakes and suggest important differences in biogeochemical potential in contrasting Arctic thermokarst lake sediment ecosystems.

Taphonomic bias in pollen and spore record: a review

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fisk, L.H.

The high dispersibility and ease of pollen and spore transport have led researchers to conclude erroneously that fossil pollen and spore floras are relatively complete and record unbiased representations of the regional vegetation extant at the time of sediment deposition. That such conclusions are unjustified is obvious when the authors remember that polynomorphs are merely organic sedimentary particles and undergo hydraulic sorting not unlike clastic sedimentary particles. Prior to deposition in the fossil record, pollen and spores can be hydraulically sorted by size, shape, and weight, subtly biasing relative frequencies in fossil assemblages. Sorting during transport results in palynofloras whosemore » composition is environmentally dependent. Therefore, depositional environment is an important consideration to make correct inferences on the source vegetation. Sediment particle size of original rock samples may contain important information on the probability of a taphonomically biased pollen and spore assemblage. In addition, a reasonable test of hydraulic sorting is the distribution of pollen grain sizes and shapes in each assemblage. Any assemblage containing a wide spectrum of grain sizes and shapes has obviously not undergone significant sorting. If unrecognized, taphonomic bias can lead to paleoecologic, paleoclimatic, and even biostratigraphic misinterpretations.« less

Relationship between dissolved organic matter quality and microbial community composition across polar glacial environments.

PubMed

Smith, H J; Dieser, M; McKnight, D M; SanClements, M D; Foreman, C M

2018-05-14

Vast expanses of Earth's surface are covered by ice, with microorganisms in these systems affecting local and global biogeochemical cycles. We examined microbial assemblages from habitats fed by glacial meltwater within the McMurdo Dry Valleys, Antarctica, and on the west Greenland Ice Sheet, (GrIS) evaluating potential physicochemical factors explaining trends in community structure. Microbial assemblages present in the different Antarctic dry valley habitats were dominated by Sphingobacteria and Flavobacteria, while Gammaproteobacteria and Sphingobacteria prevailed in west GrIS supraglacial environments. Microbial assemblages clustered by location (Canada Glacier, Cotton Glacier, west GrIS) and were separated by habitat type (i.e. ice, cryoconite holes, supraglacial lakes, sediment, and stream water). Community dissimilarities were strongly correlated with dissolved organic matter (DOM) quality. Microbial meltwater assemblages were most closely associated with different protein-like components of the DOM pool. Microbes in environments with mineral particles (i.e. stream sediments, cryoconite holes) were linked to DOM containing more humic-like fluorescence. Our results demonstrate the establishment of distinct microbial communities within ephemeral glacial meltwater habitats, with DOM-microbe interactions playing an integral role in shaping communities on local and polar spatial scales.

Detection of environmental impacts of shrimp farming through multiple lines of evidence.

PubMed

Hatje, Vanessa; de Souza, Manuel M; Ribeiro, Luisa F; Eça, Gilmara F; Barros, Francisco

2016-12-01

In order to evaluate the impact of semi-intensive shrimp farming, comparisons between Control and Impact areas were made based on multiple lines of evidence using an asymmetrical design. Water and sediment samples were collected in four shrimp farms located in Todos os Santos Bay, Bahia, Brazil. Nutrients, trace elements and macrobenthic assemblages were evaluated using uni- and multivariate analyzes. Significant differences were observed between Impact and Control areas for the water column dataset (i.e., ancillary variables, SPM, dissolved nutrients and major and trace elements in SPM), whereas no significant differences were observed for the chemistry of sediments. Macrobenthic assemblages were negatively affected by shrimp farm activities. Impacted sites presented the lowest abundance, richness and different structure of macrofaunal benthic assemblages. Farms clearly produced negative impacts in the Todos os Santos Bay. This conclusion was only possible to be reached through the use of multiple lines of evidence. Chemistry and benthic assemblages data combined produced a better description of the quality and impacts of the evaluated environments. Different conclusions would have been reached if chemistry and ecology results were studied separately vs. together. Copyright © 2016 Elsevier Ltd. All rights reserved.

Autumn ichthyoplankton assemblage in the Yangtze Estuary shaped by environmental factors.

PubMed

Zhang, Hui; Xian, Weiwei; Liu, Shude

2016-01-01

This study investigated the response of the ichthyoplankton community to environmental changes in the Yangtze Estuary using canonical correspondence analysis. Ichthyoplankton community and environmental data were recorded during the autumns of 1998, 2000, 2002, 2003, 2004, 2007 and 2009. Among the ichthyoplankton, the dominant larval and juvenile families were the Engraulidae, Gobiidae and Salangidae, and the most common eggs were from Trichiurus lepturus. The ichthyoplankton was identified via canonical correspondence analysis to three assemblages: an estuary assemblage dominated by Chaeturichthys stigmatias, a coastal assemblage dominated by Engraulis japonicus and Stolephorus commersonii, and an offshore assemblage dominated by Trichiurus lepturus. Regarding environmental factors in the Yangtze Estuary, suspended matter and surface seawater salinity were the main factors influencing the distributions of the different assemblages, while sediment from the Yangtze River during the rainy season and chlorophyll a were the principle drivers of the annual variances in the distribution of ichthyoplankton assemblages. Our aims in this study were to provide detailed characterizations of the ichthyoplankton assemblage in the autumns of seven years, examine the long-term dynamics of autumn ichthyoplankton assemblages, and evaluate the influence of environmental factors on the spatial distribution and inter-annual variations of ichthyoplankton assemblages associated with the Yangtze Estuary.

Autumn ichthyoplankton assemblage in the Yangtze Estuary shaped by environmental factors

PubMed Central

Liu, Shude

2016-01-01

This study investigated the response of the ichthyoplankton community to environmental changes in the Yangtze Estuary using canonical correspondence analysis. Ichthyoplankton community and environmental data were recorded during the autumns of 1998, 2000, 2002, 2003, 2004, 2007 and 2009. Among the ichthyoplankton, the dominant larval and juvenile families were the Engraulidae, Gobiidae and Salangidae, and the most common eggs were from Trichiurus lepturus. The ichthyoplankton was identified via canonical correspondence analysis to three assemblages: an estuary assemblage dominated by Chaeturichthys stigmatias, a coastal assemblage dominated by Engraulis japonicus and Stolephorus commersonii, and an offshore assemblage dominated by Trichiurus lepturus. Regarding environmental factors in the Yangtze Estuary, suspended matter and surface seawater salinity were the main factors influencing the distributions of the different assemblages, while sediment from the Yangtze River during the rainy season and chlorophyll a were the principle drivers of the annual variances in the distribution of ichthyoplankton assemblages. Our aims in this study were to provide detailed characterizations of the ichthyoplankton assemblage in the autumns of seven years, examine the long-term dynamics of autumn ichthyoplankton assemblages, and evaluate the influence of environmental factors on the spatial distribution and inter-annual variations of ichthyoplankton assemblages associated with the Yangtze Estuary. PMID:27114877

Seasonal flux and assemblage composition of planktic foraminifera from the northern Gulf of Mexico, 2008-2010

USGS Publications Warehouse

Spear, Jessica W.; Reynolds, Caitlin E.; Poore, Richard Z.

2011-01-01

The U.S. Geological Survey anchored a sediment trap in the northern Gulf of Mexico to collect seasonal time-series data on the flux and assemblage composition of live planktic foraminifers. This report provides an update of the previous time-series data to include results from 2010. Ten species, or varieties, of planktic foraminifers constituted ~90 percent of the assemblage: Globigerinoides ruber (pink and white varieties), Gs. sacculifer, Globigerina calida, Globigerinella aequilateralis, Globorotalia menardii group, Gt. truncatulinoides, Pulleniatina spp., Orbulina universa, and Neogloboquadrina dutertrei. The mean daily flux was 219 tests per square meter per day (m-2 day-1), with maximum fluxes of >600 tests m-2 day-1 during late December and minimum fluxes of -2 day-1) showed a steady increase of about a factor of 3 since 2009 (average 11 tests m-2 day-1), and an almost 10-fold increase from the 2008 flux (average 3 tests m-2 day-1). The progressive increase in flux resulted in a relatively large increase in percent abundance of total assemblage from 2008 (1.5 percent) to 2010 (12.4 percent). In addition, though Gs. ruber (white) percent abundance increased from 4.9 percent in 2009 to over 12 percent in 2010, it continued to occur in lower abundance than the 20-30 percent indicated by dead-assemblage records from nearby sediments.

Patterns of distribution and environmental correlates of macroalgal assemblages and sediment chlorophyll a in Oregon tidal wetlands

EPA Science Inventory

Algae have important functional roles in estuarine wetlands along the Pacific coast of the United States. We quantified differences in macroalgal abundance, composition and diversity, and sediment chlorophyll a and pheophytin a among three National Wetlands Inventory emergent mar...

ASSESSING WATER QUALITY CHANGES IN THE LAKES OF THE NORTHEASTERN UNITED STATES USING SEDIMENT DIATOMS

EPA Science Inventory

Diatom assemblages were selected as indicators of lake condition and to assess historical lake water quality changes in 257 lakes in the northeastern United States. The "top" (surface sediments, present-day) and "bottom" (generally from >30 cm deep, representing historical condit...

The FOBIMO (FOraminiferal BIo-MOnitoring) initiative—Towards a standardised protocol for soft-bottom benthic foraminiferal monitoring studies

USGS Publications Warehouse

Schoenfeld, Joachim; Alve, Elisabeth; Geslin, Emmanuelle; Jorissen, Frans; Korsun, Sergei; Spezzaferri, Silva; Abramovich, Sigal; Almogi-Labin, Ahuva; Armynot du Chatelet, Eric; Barras, Christine; Bergamin, Luisa; Bicchi, Erica; Bouchet, Vincent; Cearreta, Alejandro; Di Bella, Letizia; Dijkstra, Noortje; Trevisan Disaro, Sibelle; Ferraro, Luciana; Frontalini, Fabrizio; Gennari, Giordana; Golikova, Elena; Haynert, Kristin; Hess, Silvia; Husum, Katrine; Martins, Virginia; McGann, Mary; Oron, Shai; Romano, Elena; Mello Sousa, Silvia; Tsujimoto, Akira

2012-01-01

The European Community Marine Strategy Framework Directive (MSFD) was established to provide guidelines for monitoring the quality of marine ecosystems. Monitoring the status of marine environments is traditionally based on macrofauna surveys, for which standardised methods have been established. Benthic foraminifera are also good indicators of environmental status because of their fast turnover rates, high degree of specialisation, and the preservation of dead assemblages in the fossil record. In spite of the growing interest in foraminiferal bio-monitoring during the last decades, no standardised methodology has been proposed until today. The aim of the FOraminiferal BIo-MOnitoring (FOBIMO) expert workshop, held in June 2011 at Fribourg, Switzerland, which assembled 37 scientists from 24 research groups and 13 countries, was to develop a suite of standard methods. This paper presents the main outcome of the workshop, a list of motivated recommendations with respect to sampling devices, sample storage, treatment, faunal analysis and documentation. Our recommendations fulfil the criteria imposed both by scientific rigour and by the practical limitations of routine studies. Hence, our aim is to standardise methodologies used in bio-monitoring only and not to limit the use of different methods in pure scientific studies. Unless otherwise stated, all recommendations concern living (stained) benthic foraminiferal assemblages. We have chosen to propose two types of recommendations. Mandatory recommendations have to be followed if a study wants to qualify as sound and compatible to the norms. The most important of these recommendations are the interval from 0 to 1 cm below the sediment surface has to be sampled, and an interface corer or box corer that keeps the sediment surface intact is to be used for offshore surveys. A grab sampler must not be deployed in soft sediments. Three replicate samples are to be taken and analysed separately. Samples are to be washed on a 63-μm screen, and the living benthic foraminiferal fauna of the > 125 μm fraction is to be analysed. Splits are to be picked and counted entirely, and all counted foraminifera from at least one replicate per station have to be stored in micropalaeontological slides. Census data, supplementary laboratory data and microslides have to be archived. Advisory recommendations are to sample in autumn, to have a sample size of 50 cm2 or a tube of 8 cm inner diameter, to use > 70% ethanol as a preservative, rose Bengal at a concentration of 2 grams per litre for staining, and a staining time of at least 14 days. The split size should be defined by a target value of 300 specimens, heavy liquid separation should be avoided, and the 63–125 μm fraction or deeper sediment levels may be considered in some environments. We are convinced that the application of this protocol by a large number of scientists is a necessary first step to a general acceptance of benthic foraminifera as a reliable tool in bio-monitoring studies.

Biomonitors of stream quality on agricultural areas: fish versus invertebrates

USGS Publications Warehouse

Berkman, Hilary E.; Rabeni, Charles F.; Boyle, Terence P.

1986-01-01

Although the utility of using either fish or benthic invertebrates as biomonitors of stream quality has been clearly shown, there is little comparative information on the usefulness of the groups in any particular situation. We compared fish to invertebrate assemblages in their ability to reflect habitat quality of sediment-impacted streams in agricultural regions of northeast Missouri, USA. Habitat quality was measured by a combination of substrate composition, riparian type, buffer strip width, and land use. Invertebrates were more sensitive to habitat differences when structural measurements, species diversity and ordination, were used. Incorporating ecological measurements, by using the Index of Biological Integrity, increased the information obtained from the fish assemblage. The differential response of the two groups was attributed to the more direct impact of sediments on invertebrate life requisites; the impact of sedimentation on fish is considered more indirect and complex, affecting feeding and reproductive mechanisms.

Deep-sea Lebensspuren of the Australian continental margins

NASA Astrophysics Data System (ADS)

Przeslawski, Rachel; Dundas, Kate; Radke, Lynda; Anderson, Tara J.

Much of the deep sea comprises soft-sediment habitats dominated by comparatively low abundances of species-rich macrofauna and meiofauna. Although often not observed, these animals bioturbate the sediment during feeding and burrowing, leaving signs of their activities called Lebensspuren ('life traces'). In this study, we use still images to quantify Lebensspuren from the eastern (1921 images, 13 stations, 1300-2200 m depth) and western (1008 images, 11 stations, 1500-4400 m depth) Australian margins using a univariate measure of trace richness and a multivariate measure of Lebensspuren assemblages. A total of 46 Lebensspuren types were identified, including those matching named trace fossils and modern Lebensspuren found elsewhere in the world. Most traces could be associated with waste, crawling, dwellings, organism tests, feeding, or resting, but the origin of 15% of trace types remains unknown. Assemblages were significantly different between the two regions and depth profiles, with five Lebensspuren types accounting for over 95% of the differentiation (ovoid pinnate trace, crater row, spider trace, matchstick trace, mesh trace). Lebensspuren richness showed no strong relationships with depth, total organic carbon, or mud, although there was a positive correlation to chlorin index (i.e., organic freshness) in the eastern margin, with richness increasing with organic freshness. Lebensspuren richness was not related to epifauna either, indicating that epifauna may not be the primary source of Lebensspuren. Despite the abundance and distinctiveness of several traces both in the current and previous studies (e.g., ovoid pinnate, mesh, spider), their origin and distribution remains a mystery. We discuss this and several other considerations in the identification and quantification of Lebensspuren. This study represents the first comprehensive catalogue of deep-sea Lebensspuren in Australian waters and highlights the potential of Lebensspuren as valuable and often untapped deep-sea datasets that can be used for biogeographical, evolutionary, behavioural, and ecological studies.

Effect of abalone farming on seawater movement and benthic foraminiferal assemblage of Zostera marina in the inner bay of Wando, South Korea.

PubMed

Lee, Yeon Gyu; Choi, Yang Ho; Jeong, Da Un; Lee, Jung Sick; Kim, Yong Wan; Park, Jung Jun; Choi, Jae Ung

2016-08-15

Tidal current survey as well as geochemical and benthic foraminiferal analyses of sediment cores were conducted in an abalone farm and a Zostera bed to understand the degree to which the abalone farm facilities installed along a channel in a shallow sea affect the benthic environment and ecology. In the abalone farm, Ammonia beccarii-Pseudoparrella naraensis-Elphidium somaense-Rosalina globularis-Trochammina hadai and P. naraensis-E. somaense-A. beccarii-T. hadai assemblages appeared owing to an increase in the total nitrogen content from the biodeposits. The Zostera bed consisted of A. beccarii-P. naraensis-Buccella frigida-T. hadai assemblage owing to the gradual expansion of a brackish shallow-water environment by the rapidly decreasing current speed, and it may have flourished. Moreover, the total sulfur, Zn, Cr, and Cu contents in the sediments decreased remarkably more than those of the pre-abalone farming did, caused by the vigorous activity of Zostera marina physiology. Copyright © 2016 Elsevier Ltd. All rights reserved.

Mangrove clearing impacts on macrofaunal assemblages and benthic food webs in a tropical estuary.

PubMed

Bernardino, Angelo Fraga; Gomes, Luiz Eduardo de Oliveira; Hadlich, Heliatrice Louise; Andrades, Ryan; Correa, Lucas Barreto

2018-01-01

Despite over 21,000ha of mangrove forests being removed per year in Brazil, ecological changes following mangrove deforestation have been overlooked. Here we evaluated changes in benthic macrofaunal assemblages and food-webs at a mangrove removal and natural sites in a tropical estuary in Eastern Brazil. The impacted site had coarser sediment particle sizes suggesting significant changes in sedimentation processes after forest clearing. Spatial differences in macrofaunal abundance, biomass and diversity were not directly associated with the removal of mangrove forests, supporting recolonization of impacted areas by estuarine fauna. However, benthic assemblage composition, infaunal δ 13 C signatures and food-web diversity markedly differed at the impacted site being strongly related to sedimentary changes. The loss of infaunal trophic diversity that followed mangrove removal suggests that large-scale forest clearing may impact estuarine food webs, with potential consequences to nearby coastal ecosystems given the high clearing rate of mangrove forests in Brazil. Copyright © 2017 Elsevier Ltd. All rights reserved.

Depositional environments during the Late Palaeozoic ice age (LPIA) in northern Ethiopia, NE Africa

NASA Astrophysics Data System (ADS)

Bussert, Robert

2014-11-01

The Late Palaeozoic sediments in northern Ethiopia record a series of depositional environments during and after the Late Paleozoic ice age (LPIA). These sediments are up to 200 m thick and exceptionally heterogeneous in lithofacies composition. A differentiation of numerous types of lithofacies associations forms the basis for the interpretation of a large range of depositional processes. Major glacigenic lithofacies associations include: (1) sheets of diamictite, either overlying glacially eroded basement surfaces or intercalated into the sediment successions, and representing subglacial tillites, (2) thick massive to weakly stratified muddy clast-poor diamictites to lonestone-bearing laminated mudstones originating from a combination of suspension settling of fines and iceberg rainout, (3) lensoidal or thin-bedded diamictites deposited from debris flows, (4) wedges of traction and gravity transported coarse-grained sediments deposited in outwash fans, (5) irregular wedges or sheets of mudstones deformed primarily by extension and incorporating deformed beds or rafts of other lithofacies formed by slumping, and (6) irregular bodies of sandstone, conglomerate and diamictite deformed by glacial pushing. The dominance of laminated or massive clast-bearing mudstones in most successions indicates ice-contact water bodies as the major depositional environment. Into this environment, coarse-grained sediments were transported by various gravity driven transport processes, including dropstone activity of ice-bergs, slumping, cohesive debris flow, hyperconcentrated to concentrated flow, hyperpycnal flow, and by turbidity flow. Close to glacier termini, wedge-shaped bodies of conglomerate, sandstone, diamictite and mudstone were deposited primarily in subaqueous outwash-fans. Soft-sediment deformation of these sediments either records ice push during glacier advance or re-sedimentation by slumping. Apart from an initial glacier advance when thick ice of temperate or polythermal glaciers covered the whole basin, many sections document at least a second major phase of ice advance and retreat, and some sections additional minor advance-retreat cycles. Whether most of the LPIA sediments in northern Ethiopia were deposited in lakes or in fjords is not yet clear. Although univocal evidence of marine conditions is missing, the presence of carbonate-rich beds and the trace fossil assemblage are compatible with a restricted marine environment such as broad palaeofjords affected by strong freshwater discharge during deglaciation. A restricted marine environment for most of the sediments in northern Ethiopia could challenge models of the LPIA sediments in Arabia as primarily glaciolacustrine and glaciofluviatile deposits.

Assessing The Effects of Within-lake Variability of Fossil Assemblages On Quantitative Chironomid-inferred Temperature Reconstruction

NASA Astrophysics Data System (ADS)

Heiri, O.; Birks, H. J. B.; Brooks, S. J.; Velle, G.; Willassen, E.

An important aspect when applying organism-based palaeolimnological methods to sediment cores is the inherent variability of fossil assemblages within a lake basin. Subfossil chironomids in lake sediments have been used extensively to quantify past summer air and water temperatures. However, little is known on how heterogeneous fossil distribution affects these estimates. In an effort to assess this variability we took a total of 20 surface sediment samples each in three small and shallow (7-9 m wa- ter depth) Norwegian lakes. In every lake two transects of seven samples were taken from the centre of the lake towards the littoral and six samples in the deepest part of the lake basin. Although the fossil assemblages were generally very similar within a lake basin, there was - in all three lakes - a distinct shift in the abundances of chi- ronomid taxa towards the littoral (water depth explaining 10-18% of the total variance in the percentage data as assessed by a Detrended Canonical Correspondence Anal- ysis). When we applied to our data a quantitative chironomid-July air temperature transfer-function based on surface sediments from the deepest parts of 153 Norwegian lakes, the variability of reconstructed temperatures in our three study lakes was only slightly smaller in the 6 deep-water samples (standard deviations (SD) of 0.48, 0.52 and 0.58C) than in all the 20 samples (SD of 0.55, 0.56 and 0.59 C). Our results suggest that within-lake variability of subfossil chironomid assemblages can account for a significant part of the overall prediction error of the chironomid-July air tempera- ture model of 1.03C. Furthermore, the lack of a clear trend in inferred values towards the littoral and the similar standard deviation of the total samples as compared to the deep-water samples suggest that the Norwegian transfer-function, though calibrated on samples from the deepest part of the lake, may also be applicable to sediment cores from closer to the lake shore. It remains to be tested, however, if this holds true in deeper lakes than the ones sampled in our study.

Oligocene age of the classic Belén fruit and seed assemblage of north coastal Peru based on diatom biostratigraphy

USGS Publications Warehouse

Manchester, Steven R.; Herrera, Fabiany; Fourtainer, Elisabeth; Barron, John A.; Martinez, Jean-Noël

2012-01-01

The Belén flora, in north coastal Peru, is the most diverse fruit and seed assemblage known from the Paleogene of South America. Almost no original paleobotanical work has been done on this assemblage since the pioneering treatments published by E.W. Berry, in the 1920’s and the precise age has not been settled. Nevertheless, the flora has been regarded as an important focal point in understanding the vegetational, orogenic and climatic history of northern South America, and in recent literature has been assumed to be early Eocene. In order to tighten the age assignment, which has varied from early Eocene to early Oligocene in the opinions of different authors, we revisited the Belén site, measured the stratigraphic section, and processed the fruit and seed-containing sediment for age-diagnostic microfossils. Although pollen and foraminifera were not recovered, the sediment is rich in diatoms. The diatom assemblage includes Lisitzinia ornata and Rocella vigilans among others, indicating a latest early Oligocene age (~30-28.5 Ma) for these deeper marine sediments that we infer to have been subsequently reworked into the Belén environment . This association leads us to consider the Belén flora, to be late Oligocene in age as is also consistent with its placement in the Mancora Formation. We also reevaluate the botanical identifications, based on the original museum specimens supplemented by more recently collected specimens. The Belén flora provides a window to extinct forests in South America before the rising of the Andes in western Peru.

Pollen and palynofacies analyses of Paleocene-Eocene Thermal Maximum sediments from the North American continental shelf

NASA Astrophysics Data System (ADS)

Willard, D. A.; Robinson, M. M.; Self-Trail, J. M.; Wandless, G. A.; Sluijs, A.

2014-12-01

Analyses of pollen and palynofacies from Paleocene-Eocene Thermal Maximum (PETM) sediments from three cores collected on the Atlantic Coastal Plain provide insights into the timing of vegetation and hydrologic changes associated with the PETM in eastern North America. The Mattawoman Creek-Billingsley Road (MCBR2), South Dover Bridge (SDB), and Bass River (ODP Site 1074AX) cores were collected at progressively greater distances from the paleoshoreline in continental shelf deposits in Maryland and New Jersey, USA. The PETM carbon isotope excursion (CIE) at each site is accompanied by sharp increases in pollen and spore concentrations, as well as changes in terrestrial palynomorph assemblage composition. In the two sites proximal to the paleoshoreline in Maryland, CIE fern spore abundance was two- to three times greater than in pre-CIE assemblages. At the distal site at Bass River, fern spores are present in CIE sediments and absent in pre-CIE sediments. Angiosperm pollen is most common in CIE sediments at all three sites. Palynofacies analyses, which quantify contributions of organic material from marine and non-marine sources, indicate that terrestrial influx increased sharply at the CIE onset. This observation is consistent with seasonally increased runoff from the continent.

Microbial Biogeography on the Legacies of Historical Events in the Arctic Subsurface Sediments

NASA Astrophysics Data System (ADS)

Han, Dukki; Nam, Seung-Il; Hur, Hor-Gil

2017-04-01

The Arctic marine environment consists of various microbial habitats. The niche preference of microbial assemblages in the Arctic Ocean has been surveyed with the modern environmental change by oceanographic traits such as sea-ice dynamics, current circulation, and sedimentation. The North Pacific inflow from the shallow and narrow Bering Strait is highly susceptible to sea-level fluctuations, and thus the water mass exchange mediated by the history of sea-ice between the North Pacific and the Chukchi Sea in the Arctic Ocean. Over geological timescale, the climate change may provide putative evidences for ecological niche for the Arctic microbial assemblages as well as geological records in response to the paleoclimate change. In the present study, the multidisciplinary approach, based on microbiology, geology, and geochemistry, was applied to survey the microbial assemblages in the Arctic subsurface sediments and help further integrate the microbial biogeography and biogeochemical patterns in the Arctic subsurface biosphere. Our results describe microbial assemblages with high-resolution paleoceanographic records in the Chukchi Sea sediment core (ARA02B/01A-GC; 5.4 mbsf) to show the processes that drive microbial biogeographic patterns in the Arctic subsurface sediments. We found microbial habitat preferences closely linked to Holocene paleoclimate records as well as geological, geochemical, and microbiological evidence for the inference of the sulphate-methane transition zone (SMTZ) in the Chukchi Sea. Especially, the vertically distributed predominant populations of Gammaproteobacteria and Marine Group II Euryarchaeota in the ARA02B/01A-GC consistent with the patterns of the known global SMTZs and Holocene sedimentary records, suggesting that in-depth microbiological profiles integrated with geological records may be indirectly useful for reconstructing Arctic paleoclimate changes. In the earliest phase of Mid Holocene in the ARA02B/01A-GC with concentrated crenarchaeol (a unique biomarker for Marine Group I Thaumarchaea), the most abundant archaeal population was Marine Group II Euryarchaeota rather than Marine Group I Thaumarchaea, suggesting that the interpretation of archaeal tetraether lipids in subsurface sediments needs careful consideration for paleoceanography. In conclusion, our findings have important implications for the availability of microbial biogeography in the sedimentary record. The present study offers a deeper understanding of the legacies of historical events during the Holocene and implies that the survey of microbial biogeography may be an appropriate tool to monitor potential effects from the climate change in the Arctic Ocean.

Changes in the northern Adriatic molluscan community from the Holocene transgression up to the present

NASA Astrophysics Data System (ADS)

Gallmetzer, Ivo; Haselmair, Alexandra; Tomasovych, Adam; Stachowitsch, Michael; Zuschin, Martin

2016-04-01

The northern Adriatic Sea is one of the few modern, epicontinental seas comparable to typical Palaeozoic shelf environments. It has a shallow average water depth (<50 m) and was formed at the end of the last glaciation when the sea level rose. Since historical times this part of the Adriatic has been strongly influenced by human activities through multiple direct or indirect impacts (e.g. fishing, coastal building development, pollution, eutrophication, increased sedimentation), making it one of the most degraded marine ecosystems worldwide. Our study was designed to reconstruct major environmental changes here since the onset of the Holocene transgression using down-core changes in death assemblages of molluscs as indicators for ecological shifts. The sediment cores were taken at three different stations (Brijuni Islands, Croatia, off Piran, Slovenia, and off Venice, Italy), each representative of specific sediment and nutrient conditions and degrees of habitat exploitation. The cores were 1.5 m long and had diameters of 90 or 160 mm. For the molluscan shell analyses, sediment subsamples were examined for species composition, abundance, taxonomic similarity and ecological interactions (e.g. frequencies of drilling predation). In total, 98,700 valves and shells were investigated and 113 bivalve and 178 gastropod species recorded. Sedimentation rates derived from 210Pb dating are very low, between 0.15 cm/yr at Brijuni and 0.25 cm/yr at Piran. The dating of Lucinella divaricata, Timoclea ovata and Gouldia minima shells with 14C calibrated amino-acid racemisation (AAR) revealed that the cores at all three stations cover at least 6000 to 8000 years, i.e. the whole Holocene transgression period. Time averaging is high, especially in the lower core layers of Piran station, probably due to strong bioturbation. Surface mixed-layer assemblages tend to show right-skewed postmortem age-frequency distributions, whereas subsurface assemblages show unimodal or uniform shapes. Molluscan assemblages show significant interregional differences that correlate with sedimentation rate, grain size, and the occurrence of organic pollutants and heavy metals. Down-core changes in molluscan communities are also conspicuous in all cores. They partly reflect long-term changes in water depth, vegetation cover or grain size distribution caused by natural fluctuations of environmental conditions over the past millennia. In the uppermost core layers, however, these changes can be interpreted as indicators of anthropogenic impacts.

Development and application of a pollen-based paleohydrologic reconstruction from the lower Roanoke River Basin, North Carolina, USA

USGS Publications Warehouse

Willard, D.; Bernhardt, C.; Brown, R.; Landacre, B.; Townsend, P.

2011-01-01

We used pollen assemblages to reconstruct late-Holocene paleohydrologic patterns in floodplain deposits from the lower Roanoke River basin (North Carolina, southeastern USA). Using 120 surface samples from 38 transects, we documented statistical relationships between pollen assemblages, vegetation, and landforms. Backswamp pollen assemblages (long hydroperiods) are dominated by Nyssa (tupelo) and Taxodium (cypress) and have high pollen concentrations. Sediments from elevated levees and seasonally flooded forests (shorter hydroperiods) are characterized by dominant Pinus (pine) pollen, variable abundance of hardwood taxa, and low pollen concentrations. We apply the calibration data set to interpret past vegetation and paleohydrology. Pollen from a radiocarbon-dated sediment core collected in a tupelo-cypress backswamp indicates centennial-scale fluctuations in forest composition during the last 2400 years. Backswamp vegetation has occupied the site since land clearance began ~300 years ago. Recent dam emplacement affected sedimentation rates, but vegetation changes are small compared with those caused by pre-Colonial climate variability. The occurrence of wetter conditions from ~2200 to 1800 cal. yr BP, ~1100 to 750 cal. yr BP, and ~400 to 250 cal. yr BP may indicate changes in cyclonic circulation patterns related to shifts in the position of the Bermuda High and jet stream.

Glacial-interglacial variations in sediment organic carbon accumulation and benthic foraminiferal assemblages on the Bermuda Rise (ODP Site 1063) during MIS 13 to 10

NASA Astrophysics Data System (ADS)

Poli, Maria Serena; Meyers, Philip A.; Thunell, Robert C.; Capodivacca, Marco

2012-09-01

We have determined organic carbon concentrations and isotopic compositions and benthic foraminiferal assemblages in sediments deposited between ˜500 and 340 ka at ODP Site 1063 on the northeastern flank of the Bermuda Rise. This time interval includes Marine Isotope Stage (MIS) 11, a particularly warm and long interglacial that was similar to today, and MIS 12, one of the most severe glacials of the last 600 kyr. During MIS 11.3, the peak of interglacial warming, organic carbon accumulation rates are low and benthic foraminiferal assemblages are dominated by Nuttallides umbonifera, a species indicative of oligotrophic environments. Higher accumulation rates during MIS 12 and 10 correspond with elevated sedimentation rates (33-36 cm/kyr). This pattern implies a combination of enhanced delivery and improved preservation of sediment organic matter during these glacial times. Organic δ13C values are less negative during MIS 12 and MIS 10 than during MIS 11, which is consistent with greater glacial-stage marine productivity. High relative abundances ofOridorsalis umbonatus during glacial intervals probably records a low but sustained flux of highly degraded organic material. Large, recurrent fluctuations in the abundance of Epistominella exiguaat the beginnings of the MIS 12 and MIS 10 glaciations suggest a marked increase in local phytoplankton blooms at these times and consequent delivery of phytodetritus to the seafloor. The most likely causes of these variations are changes in the position and strength of the Gulf Stream and its associated cold-ring eddies, combined with increased advection of terrigenous sediments from northerly locations during glacial lowstands.

Large-scale deformational systems in the South Polar Layered Deposits (Promethei Lingula, Mars): "Soft-sediment" and Deep-Seated Gravitational Slope Deformations Mechanisms

NASA Astrophysics Data System (ADS)

Guallini, Luca; Brozzetti, Francesco; Marinangeli, Lucia

2012-08-01

The present study is the first attempt at a detailed structural and kinematic analysis of large-scale deformational systems observed in the South Polar Layered Deposits (SPLDs) in the Promethei Lingula (PL) margins (Mars). By systematically collecting attitude data referable to previously unknown deformational structures and defining the cross-cut relationships of the structures, we reconstructed a deformational history consisting of two superimposed, well-defined stages. The first stage is dominated by large-scale strike-slip and transtensional faults arranged into conjugate systems and delimiting shear zones that show a wide range of subsidiary structures, including normal and reverse faults, drag folds, boudins, S-C tectonites and sub-horizontal interstratal shear planes marked by sygmoidal boudins. Other typical structures referable to this event are ductile folds (locally true convolute folds) and lobes (ball-and-pillow structures) affecting certain marker beds of the succession. We suggest that the structural assemblage might be the expression of a shallow soft-sediment tectonics that possibly occurred during warm periods of the South Pole climate. The second stage seems to affect the weaker and in certain cases pre-deformed stratigraphic levels of the SPLD succession. This stage is mainly characterized by extensional deformations caused by gravity. The consequence of the deformations is the nucleation of Deep-Seated Gravitational Slope Deformations (DSGSDs) marked by typical morphostructures, such as scarps, trenches and bulging basal contractant zones. These phenomena were never observed within an ice cap. According to terrestrial modeling, these slow collapses were caused by (1) the presence of detachment levels (i.e., subhorizontal bedding planes) along which the ice-sheet margins can slide and (2) the development of listric faults within the glacial mass, which merge with sub-horizontal shear planes in the subsurface. The presence of complex deformational systems in the SPLD necessarily implies that a large-scale dynamics of the ice-sheet occurred in the past. The relatively fast internal creep and basal/internal sliding, inferable from the structure assemblage, can be due to partial melting of the ice possibly caused by climatic changes in the Promethei Lingula region. In this manner, we believe that climate heating (which, according to the literature, is likely caused by orbital variations) softened some of the SPLD layers, triggering or accelerating the ice sheet's outward movement. The evidence of a marked disharmonic deformational style through the SPLD succession suggests the possibility of local periodic compositional variations in the sequence.

Limited depth zonation among bathyal epibenthic megafauna of the Gully submarine canyon, northwest Atlantic

NASA Astrophysics Data System (ADS)

Kenchington, E. L.; Cogswell, A. T.; MacIsaac, K. G.; Beazley, L.; Law, B. A.; Kenchington, T. J.

2014-06-01

The Gully is a large submarine canyon incised into the Scotian Shelf, in the northwest Atlantic. A submersible-mounted camera was used to collect 17 km of high resolution video imagery of the soft sediment flanks and floor of the canyon between 1000 and 2500 m depth. A depth-stratified random survey design with two transects per stratum was followed. Depth strata were drawn at 1000-1500 m, 1500-2000 m and 2000-2500 m reflecting global and regional faunal boundaries. The 47,614 individuals or colonies observed on the transects were identified into 49 unique taxa drawn from 7 phyla, while 21 additional taxa were observed between the transect lines. Cnidaria was the most diverse phylum (22 taxa) on the transects, followed by the Echinodermata (15 taxa). Most fauna were sessile or sedentary suspension feeders. A species of Xenophyophorida, likely Syringammina sp., was the most abundant taxon. Cluster analysis of transects based on a Bray-Curtis (BC) matrix of species abundance identified one cluster of five transects and one independent transect - the deepest transect (2406 m average depth). A similarity profile test indicated that this structure is not random. There was a significant change in the megafaunal assemblage with depth over scales of 10s of kilometers, accounting for 65% of the variation in the BC matrix. Both total organic carbon and labile carbon were higher in cores from the 1000-1500 m stratum than at greater depth, consistent with transport of food and sediments into the canyon from shallower waters. The first principal component calculated from species abundances separated the two transects from the 1000-1500 m depth stratum from the others indicating that sediment food supply influences community structure and composition. Over small spatial scales (≤10 m), eight groups of species associations were identified. However, the associations between the species within each group were not strong with the highest correlation between the Xenophyophorida and the Pennatulacea (ρ=0.66). At this spatial scale substrate type was an important factor, with hard and soft bottom species associations being identified.

Organic matter quantity and quality, metals availability and foraminiferal assemblages as environmental proxy applied to the Bizerte Lagoon (Tunisia).

PubMed

Martins, Maria Virgínia Alves; Helali, Mohamed Amine; Zaaboub, Noureddine; Boukef-BenOmrane, Imen; Frontalini, Fabrizio; Reis, Darlly; Portela, Helena; Clemente, Iara Martins Matos Moreira; Nogueira, Leandro; Pereira, Egberto; Miranda, Paulo; El Bour, Monia; Aleya, Lotfi

2016-04-15

This study analyzes the benthic trophic state of Bizerte Lagoon (Tunisia) based on the total organic matter and the bioavailability of biopolymeric carbon including proteins (PTN), carbohydrates (CHO), lipids (LIP), chlorophyll a, as well as bacteria counts. The overall simultaneously extracted metals (SEM), and acid volatile sulfides (AVS) as well as the SEM/AVS ratio indicative of the toxicity of the sediments also were analyzed aiming to study their impact in the dimension, composition and structure of both dead and living benthic foraminiferal assemblages. In the studied sites TOC content is relatively high and the PTN/CHO values indicate that they can be considered as meso-eutrophic environments. The CHO/TOC and C/N values suggest that the OM which accumulated on the sediments surface has mainly natural origin despite the introduction of municipal and industrial effluents in the lagoon and the large bacterial pool. The living assemblages of benthic foraminifera of Bizerte Lagoon are quite different to other Mediterranean transitional systems studied until now. They are composed of typical lagoonal species but also include several marine and opportunistic species including significant numbers of bolivinids, buliminids, Nonionella/Nonionoides spp. and Cassidulina/Globocassidulina spp. These assemblages seem to benefitfrom the physicochemical parameters and the sediment stability. They may however face environmental stress in the lagoon related to the AVS production as a result of the organic matter degradation and toxicity in some areas due to the available concentrations of metals. Nonetheless statistical results evidence that the structure and dimension of assemblages are being controlled mostly by OM quantity and quality related mainly to the availability of PTN, CHO and chlorophyll a. Results of this work support the importance of considering OM quantity and quality in studies of environmental impact in coastal systems. Copyright © 2016 Elsevier Ltd. All rights reserved.

Benthic Foraminifera as ecological indicators for water quality on the Great Barrier Reef

NASA Astrophysics Data System (ADS)

Uthicke, Sven; Nobes, Kristie

2008-07-01

Benthic foraminifera are established indicators for Water Quality (WQ) in Florida and the Caribbean. However, nearshore coral reefs of the Great Barrier Reef (GBR) and other Pacific regions are also subjected to increased nutrient and sediment loads. Here, we investigate the use of benthic foraminifera as indicators to assess status and trends of WQ on GBR reefs. We quantified several sediment parameters and the foraminiferan assemblage composition on 20 reefs in four geographic regions of the GBR, and along a water column nutrient and turbidity gradient. Twenty-seven easily recognisable benthic foraminiferan taxa (>63 μm) were distinguished. All four geographic regions differed significantly ( p < 0.05, ANOSIM) in their assemblage composition, and a redundancy analysis (RDA) showed that sediment parameters only explained a small proportion of the variance in the assemblage composition. On nine reefs along a previously studied water quality gradient, foraminifera showed a distinct shift in assemblage composition towards larger symbiont-bearing taxa from turbid inner shelf towards clearer outer shelf reefs. A RDA separated symbiotic and aposymbiotic (heterotrophic) taxa. In addition, total suspended solid and water column chlorophyll a concentrations were negatively correlated, and optical depth and distance to the mainland were positively correlated, with the abundance of symbiont-bearing taxa. Several large foraminifera were identified as indicators for offshore, clear water conditions. In contrast, heterotrophic rotaliids and a species retaining plastids ( Elphidium sp.) where highly characteristic for low light, higher nutrient conditions. Application of the FORAM index to GBR assemblage composition showed a significant increase in the value of this index with increased distance from the mainland in the Whitsunday region ( r2 = 0.75, p < 0.001), and therefore with increasing light and decreased nutrient availability. We conclude that it will be possible to apply this index to GBR and possibly other Pacific reefs after some adaptations and additional experimental work on species-specific limiting factors.

Importance of riparian forests in urban catchments contingent on sediment and hydrologic regimes

USGS Publications Warehouse

Roy, A.H.; Freeman, Mary C.; Freeman, B.J.; Wenger, S.J.; Meyer, J.L.; Ensign, W.E.

2006-01-01

Forested riparian corridors are thought to minimize impacts of landscape disturbance on stream ecosystems; yet, the effectiveness of streamside forests in mitigating disturbance in urbanizing catchments is unknown. We expected that riparian forests would provide minimal benefits for fish assemblages in streams that are highly impaired by sediment or hydrologic alteration. We tested this hypothesis in 30 small streams along a gradient of urban disturbance (1–65% urban land cover). Species expected to be sensitive to disturbance (i.e., fluvial specialists and “sensitive” species that respond negatively to urbanization) were best predicted by models including percent forest cover in the riparian corridor and a principal components axis describing sediment disturbance. Only sites with coarse bed sediment and low bed mobility (vs. sites with high amounts of fine sediment) had increased richness and abundances of sensitive species with higher percent riparian forests, supporting our hypothesis that response to riparian forests is contingent on the sediment regime. Abundances of Etheostoma scotti, the federally threatened Cherokee darter, were best predicted by models with single variables representing stormflow (r2 = 0.34) and sediment (r2 = 0.23) conditions. Lentic-tolerant species richness and abundance responded only to a variable representing prolonged duration of low-flow conditions. For these species, hydrologic alteration overwhelmed any influence of riparian forests on stream biota. These results suggest that, at a minimum, catchment management strategies must simultaneously address hydrologic, sediment, and riparian disturbance in order to protect all aspects of fish assemblage integrity.

Importance of riparian forests in urban catchments contingent on sediment and hydrologic regimes.

PubMed

Roy, Allison H; Freeman, Mary C; Freeman, Byron J; Wenger, Seth J; Ensign, William E; Meyer, Judith L

2006-04-01

Forested riparian corridors are thought to minimize impacts of landscape disturbance on stream ecosystems; yet, the effectiveness of streamside forests in mitigating disturbance in urbanizing catchments is unknown. We expected that riparian forests would provide minimal benefits for fish assemblages in streams that are highly impaired by sediment or hydrologic alteration. We tested this hypothesis in 30 small streams along a gradient of urban disturbance (1-65% urban land cover). Species expected to be sensitive to disturbance (i.e., fluvial specialists and "sensitive" species that respond negatively to urbanization) were best predicted by models including percent forest cover in the riparian corridor and a principal components axis describing sediment disturbance. Only sites with coarse bed sediment and low bed mobility (vs. sites with high amounts of fine sediment) had increased richness and abundances of sensitive species with higher percent riparian forests, supporting our hypothesis that response to riparian forests is contingent on the sediment regime. Abundances of Etheostoma scotti, the federally threatened Cherokee darter, were best predicted by models with single variables representing stormflow (r(2) = 0.34) and sediment (r(2) = 0.23) conditions. Lentic-tolerant species richness and abundance responded only to a variable representing prolonged duration of low-flow conditions. For these species, hydrologic alteration overwhelmed any influence of riparian forests on stream biota. These results suggest that, at a minimum, catchment management strategies must simultaneously address hydrologic, sediment, and riparian disturbance in order to protect all aspects of fish assemblage integrity.

A paleoecologic reconstruction of the history of Featherbed Bank, Biscayne National Park, Biscayne Bay, Florida

USGS Publications Warehouse

Stone, Jeffery R.; Cronin, T. M.; Brewster-Wingard, G. L.; Ishman, S.E.; Wardlaw, B.R.; Holmes, C.W.

2000-01-01

Using multiple-proxy biological indicators, a paleoecological history of the past 550 years of Featherbed Bank, Biscayne Bay, has been reconstructed from a short (2.26 m) sediment core. Paleoecological changes in ostracode, mollusc, and foraminifer assemblages show that core SEI297-FB-1 can be divided into three distinctly different zones, which together provide evidence for distinct changes in historical environmental conditions at Featherbed Bank. Assemblages from fossil biotic communities within zone 1, representing approximately 1440 to 1550 AD, are characterized by open-marine biota with relatively limited numbers of epiphytic biota. Molluscan faunal indicators suggest the sediment was capable of supporting infaunal organisms and that faunal richness was relatively limited during this time period. A change in the biotic community occurred around 1550 AD and continued until the late 1800's distinguishing zone 2. Fossil biotic indicators from zone 2 show a strong dominance of epiphytic organisms within all of the biotic communities examined. Foraminifers, molluscs, and ostracodes capable of subsisting in salinities slightly lower than normal marine begin to flourish in this time period, and there is a marked decline in infaunal molluscs. Zone 2 assemblages are replaced around 1900 AD by increased numbers of organisms that typify open-marine conditions and a return to decreased epiphytic assemblages, similar to zone 1. Zone 3 assemblages, however, show some strong dissimilarities from zone 1, including limited infaunal molluscs, increased abundances of the ostracode Malzella floridana, and a significant increase in molluscan faunal richness.

Taphonomy and paleoecology of nonmarine mollusca: indicators of alluvial plain lacustrine sedimentation, upper part of the Tongue River Member, Fort Union Formation ( Paleocene), Northern Powder River Basin, Wyoming and Montana ( USA).

USGS Publications Warehouse

Hanley, J.H.; Flores, R.M.

1987-01-01

The composition, species abundances, and spatial and temporal distributions of mollusc assemblages were controlled by the environments in which they lived and the depositional processes that affected the molluscs after death and before final burial. Post-mortem transport, reworking and concentration of shells, and mixing of faunal elements from discrete habitats produced a taphonomic 'overprint' on assemblage characteristics that directly reflects the processes of alluvial plain and floodbasin lacustrine sedimentation. The 'overprint' can be interpreted from outcrop analysis of molluscan biofabric, which consists of: 1) orientation, fragmentation, size-sorting, abrasion, density, and dispersion of shells, 2) the nature and extent of shell-infilling, and 3) ratio of articulated to disarticulated bivalves. Taphonomic characteristics were used with sedimentological properties to differentiate in-place, reworked, transported, and ecologically mixed mollusc assemblages. This study also defines the paleoecology of habitat preferences of mollusc species as a basis for recognition of the environments in which these assemblages were deposited: 1) large floodbasin lakes, 2) small floodbasin lakes, and 3) crevasse deltas and splays. Integration of sedimentology and paleoecology provides an interdisciplinary approach to the interpretation of alluvial environments through time in the Tongue River Member. -Authors

Seismically-induced soft-sediment deformation structures associated with the Magallanes-Fagnano Fault System (Isla Grande de Tierra del Fuego, Argentina)

NASA Astrophysics Data System (ADS)

Onorato, M. Romina; Perucca, Laura; Coronato, Andrea; Rabassa, Jorge; López, Ramiro

2016-10-01

In this paper, evidence of paleoearthquake-induced soft-sediment deformation structures associated with the Magallanes-Fagnano Fault System in the Isla Grande de Tierra del Fuego, southern Argentina, has been identified. Well-preserved soft-sediment deformation structures were found in a Holocene sequence of the Udaeta pond. These structures were analyzed in terms of their geometrical characteristics, deformation mechanism, driving force system and possible trigger agent. They were also grouped in different morphological types: sand dykes, convolute lamination, load structures and faulted soft-sediment deformation features. Udaeta, a small pond in Argentina Tierra del Fuego, is considered a Quaternary pull-apart basin related to the Magallanes-Fagnano Fault System. The recognition of these seismically-induced features is an essential tool for paleoseismic studies. Since the three main urban centers in the Tierra del Fuego province of Argentina (Ushuaia, Río Grande and Tolhuin) have undergone an explosive growth in recent years, the results of this study will hopefully contribute to future analyses of the seismic risk of the region.

Response of benthic invertebrate assemblages to metal exposure and bioaccumulation associated with hard-rock mining in northwestern streams, USA

USGS Publications Warehouse

Maret, T.R.; Cain, D.J.; MacCoy, D.E.; Short, T.M.

2003-01-01

Benthic macroinvertebrate assemblages, environmental variables, and associated mine density were evaluated during the summer of 2000 at 18 reference and test sites in the Coeur d'Alene and St. Regis River basins, northwestern USA as part of the US Geological Survey's National Water-Quality Assessment Program. Concentrations of Cd, Pb, and Zn in water and (or) streambed sediment at test sites in basins where production mine density was ???0.2 mines/km2 (in a 500-m stream buffer) were significantly higher than concentrations at reference sites. Zn and Pb were identified as the primary contaminants in water and streambed sediment, respectively. These metal concentrations often exceeded acute Ambient Water Quality Criteria for aquatic life and the National Oceanic and Atmospheric Administration Probable Effect Level for streambed sediment. Regression analysis identified significant correlations between production mine density in each basin and Zn concentrations in water and Pb in streambed sediment (r2 = 0.69 and 0.65, p < 0.01). Metal concentrations in caddisfly tissue, used to verify site-specific exposures of benthos, also were highest at sites downstream from intensive mining. Benthic invertebrate taxa richness and densities were lower at sites downstream than upstream of areas of intensive hard-rock mining and associated metal enrichment. Benthic invertebrate metrics that were most effective in discriminating changes in assemblage structure between reference and mining sites were total number of taxa, number of Ephemeroptera, Plecoptera, and Trichoptera (EPT) taxa, and densities of total individuals, EPT individuals, and metal-sensitive Ephemeroptera individuals.

Mid-Cretaceous amber fossils illuminate the past diversity of tropical lizards.

PubMed

Daza, Juan D; Stanley, Edward L; Wagner, Philipp; Bauer, Aaron M; Grimaldi, David A

2016-03-01

Modern tropical forests harbor an enormous diversity of squamates, but fossilization in such environments is uncommon and little is known about tropical lizard assemblages of the Mesozoic. We report the oldest lizard assemblage preserved in amber, providing insight into the poorly preserved but potentially diverse mid-Cretaceous paleotropics. Twelve specimens from the Albian-Cenomanian boundary of Myanmar (99 Ma) preserve fine details of soft tissue and osteology, and high-resolution x-ray computed tomography permits detailed comparisons to extant and extinct lizards. The extraordinary preservation allows several specimens to be confidently assigned to groups including stem Gekkota and stem Chamaleonidae. Other taxa are assignable to crown clades on the basis of similar traits. The detailed preservation of osteological and soft tissue characters in these specimens may facilitate their precise phylogenetic placement, making them useful calibration points for molecular divergence time estimates and potential keys for resolving conflicts in higher-order squamate relationships.

Mid-Cretaceous amber fossils illuminate the past diversity of tropical lizards

PubMed Central

Daza, Juan D.; Stanley, Edward L.; Wagner, Philipp; Bauer, Aaron M.; Grimaldi, David A.

2016-01-01

Modern tropical forests harbor an enormous diversity of squamates, but fossilization in such environments is uncommon and little is known about tropical lizard assemblages of the Mesozoic. We report the oldest lizard assemblage preserved in amber, providing insight into the poorly preserved but potentially diverse mid-Cretaceous paleotropics. Twelve specimens from the Albian-Cenomanian boundary of Myanmar (99 Ma) preserve fine details of soft tissue and osteology, and high-resolution x-ray computed tomography permits detailed comparisons to extant and extinct lizards. The extraordinary preservation allows several specimens to be confidently assigned to groups including stem Gekkota and stem Chamaleonidae. Other taxa are assignable to crown clades on the basis of similar traits. The detailed preservation of osteological and soft tissue characters in these specimens may facilitate their precise phylogenetic placement, making them useful calibration points for molecular divergence time estimates and potential keys for resolving conflicts in higher-order squamate relationships. PMID:26973870

New relationship between fundamental site frequency and thickness of soft sediments from seismic ambient noise

NASA Astrophysics Data System (ADS)

Abd el-aal, Abd el-aziz Khairy

2018-05-01

In this contribution, new relationship between the fundamental site frequency and the thickness of soft sediments is obtained for many sites in Egypt. The Horizontal-to-Vertical Spectral Ratio ("H/V") technique (known as Nakamura technique) can be used as a robust tool to determine the thickness of soft sediments layers overlaying bedrock from observations and measurements of seismic ambient noise data. In Egypt, numerous seismic ambient noise measurements have been conducted in several areas to determine the dynamic properties of soft soil for engineering purposes. At each site in each studied area, the fundamental site frequency was accurately estimated from the main peak in the spectral ratio between the horizontal and vertical component. Consequently, an extensive database of microtremor measurements, well logging data, and shallow seismic refraction data have been configured and assembled for the studied areas. New formula between fundamental site frequency (f 0 ) and thickness of soft sediments (h) is established. The new formula has been validated and compared with other formulas of earlier scientists, and the results indicate that the calculated depth and geometry of the bedrock surface using new formula are in a good agreement with well logs data and previously published seismic refraction surveys in the investigated sites.

Ichthyoplankton assemblages of coastal west-central Lake Erie and associated habitat characteristics

USGS Publications Warehouse

McKenna, J.E.; Hunter, R. Douglas; Fabrizio, M.C.; Savino, J.F.; Todd, T.N.; Bur, M.

2008-01-01

Early life stage survival often determines fish cohort strength and that survival is affected by habitat conditions. The structure and dynamics of ichthyoplankton assemblages can tell us much about biodiversity and fish population dynamics, but are poorly understood in nearshore areas of the Great Lakes, where most spawning and nursery habitats exist. Ichthyoplankton samples were collected with a neuston net in waters 2-13 m deep weekly or biweekly from mid-April through August, during 3 years (2000-2002) as part of a study of fish assemblages in west-central Lake Erie. A suite of abiotic variables was simultaneously measured to characterize habitat. Cluster and ordination analyses revealed several distinct ichthyoplankton assemblages that changed seasonally. A lake whitefish (Coregonus clupeaformis) dominated assemblage appeared first in April. In May, assemblages were dominated by several percid species. Summer assemblages were overwhelmingly dominated by emerald shiner (Notropis atherinoides), with large gizzard shad (Dorosoma cepedianum) and alewife (Alosa pseudoharengus) components. This seasonal trend in species assemblages was also associated with increasing temperature and water clarity. Water depth and drift processes may also play a role in structuring these assemblages. The most common and widely distributed assemblages were not associated with substratum type, which we characterized as either hard or soft. The timing of hatch and larval growth separated the major groups in time and may have adaptive significance for the members of each major assemblage. The quality and locations (with reference to lake circulation) of spawning and nursery grounds may determine larval success and affect year class strength.

Microbial community structure and function in sediments from e-waste contaminated rivers at Guiyu area of China.

PubMed

Liu, Jun; Chen, Xi; Shu, Hao-Yue; Lin, Xue-Rui; Zhou, Qi-Xing; Bramryd, Torleif; Shu, Wen-Sheng; Huang, Li-Nan

2018-04-01

The release of toxic organic pollutants and heavy metals by primitive electronic waste (e-waste) processing to waterways has raised significant concerns, but little is known about their potential ecological effects on aquatic biota especially microorganisms. We characterized the microbial community composition and diversity in sediments sampled along two rivers consistently polluted by e-waste, and explored how community functions may respond to the complex combined pollution. High-throughput 16S rRNA gene sequencing showed that Proteobacteria (particularly Deltaproteobacteria) dominated the sediment microbial assemblages followed by Bacteroidetes, Acidobacteria, Chloroflexi and Firmicutes. PICRUSt metagenome inference provided an initial insight into the metabolic potentials of these e-waste affected communities, speculating that organic pollutants degradation in the sediment might be mainly performed by some of the dominant genera (such as Sulfuricurvum, Thiobacillus and Burkholderia) detected in situ. Statistical analyses revealed that toxic organic compounds contributed more to the observed variations in sediment microbial community structure and predicted functions (24.68% and 8.89%, respectively) than heavy metals (12.18% and 4.68%), and Benzo(a)pyrene, bioavailable lead and electrical conductivity were the key contributors. These results have shed light on the microbial assemblages in e-waste contaminated river sediments, indicating a potential influence of e-waste pollution on the microbial community structure and function in aquatic ecosystems. Copyright © 2017 Elsevier Ltd. All rights reserved.

Clay Mineralogy of AN Alluvial Aquifer in a Mountainous, Semiarid Terrain, AN Example from Rifle, Colorado

NASA Astrophysics Data System (ADS)

Elliott, W. C.; Lim, D.; Zaunbrecher, L. K.; Pickering, R. A.; Williams, K. H.; Navarre-Sitchler, A.; Long, P. E.; Noel, V.; Bargar, J.; Qafoku, N. P.

2015-12-01

Alluvial sediments deposited along the Colorado River corridor in the semi-arid regions of central to western Colorado can be important hosts for legacy contamination including U, V, As and Se. These alluvial sediments host aquifers which are thought to provide important "hot spots" and "hot moments" for microbiological activity controlling organic carbon processing and fluxes in the subsurface. Relatively little is known about the clay mineralogy of these alluvial aquifers and the parent alluvial sediments in spite of the fact that they commonly include lenses of silt-clay materials. These lenses are typically more reduced than coarser grained materials, but zones of reduced and more oxidized materials are present in these alluvial aquifer sediments. The clay mineralogy of the non-reduced parent alluvial sediments of the alluvial aquifer located in Rifle, CO (USA) is composed of chlorite, smectite, illite, kaolinite and quartz. The clay mineralogy of non-reduced fine-grained materials at Rifle are composed of the same suite of minerals found in the sediments plus a vermiculite-smectite intergrade that occurs near the bottom of the aquifer near the top of the Wasatch Formation. The clay mineral assemblages of the system reflect the mineralogically immature character of the source sediments. These assemblages are consistent with sediments and soils that formed in a moderately low rainfall climate and suggestive of minimal transport of the alluvial sediments from their source areas. Chlorite, smectite, smectite-vermiculite intergrade, and illite are the likely phases involved in the sorption of organic carbon and related microbial redox transformations of metals in these sediments. Both the occurrence and abundance of chlorite, smectite-vermiculite, illite and smectite can therefore exert an important control on the contaminant fluxes and are important determinants of biogeofacies in mountainous, semiarid terrains.

Longitudinal distribution of Chironomidae (Diptera) downstream from a dam in a neotropical river.

PubMed

Pinha, G D; Aviz, D; Lopes Filho, D R; Petsch, D K; Marchese, M R; Takeda, A M

2013-08-01

The damming of a river causes dangerous consequences on structure of the environment downstream of the dam, modifying the sediment composition, which impose major adjustments in longitudinal distribution of benthic community. The construction of Engenheiro Sérgio Motta Dam in the Upper Paraná River has caused impacts on the aquatic communities, which are not yet fully known. This work aimed to provide more information about the effects of this impoundment on the structure of Chironomidae larvae assemblage. The analysis of data of physical and chemical variables in relation to biological data of 8 longitudinal sections in the Upper Paraná River showed that composition of Chironomidae larvae of stations near Engenheiro Sérgio Motta Dam differed of the other stations (farther of the Dam). The predominance of coarse sediments at stations upstream and finer sediments further downstream affected the choice of habitat by different morphotypes of Chironomidae and it caused a change in the structure of this assemblage in the longitudinal stretch.

Macrofaunal recolonization of copper-contaminated sediments in San Diego Bay.

PubMed

Neira, Carlos; Mendoza, Guillermo; Porrachia, Magali; Stransky, Chris; Levin, Lisa A

2015-12-30

Effects of Cu-loading on macrofaunal recolonization were examined in Shelter Island Yacht Basin (San Diego Bay, California). Sediments with high and low Cu levels were defaunated and Cu-spiked, translocated, and then placed back into the environment. These demonstrated that the alteration observed in benthic communities associated with Cu contamination occurs during initial recolonization. After a 3-month exposure to sediments with varying Cu levels, two primary colonizing communities were identified: (1) a "mouth assemblage" resembling adjacent background fauna associated with low-Cu levels that was more diverse and predominantly dominated by surface- and subsurface-deposit feeders, burrowers, and tube builders, and (2) a "head assemblage" resembling adjacent background fauna associated with high-Cu concentrations, with few dominant species and an increasing importance of carnivores and mobile epifauna. Cu loading can cause reduced biodiversity and lower structural complexity that may last several months if high concentrations persist, with a direct effect on community functioning. Copyright © 2015 Elsevier Ltd. All rights reserved.

The impact of implanted whale carcass on nematode communities in shallow water area of Peter the Great Bay (East Sea)

NASA Astrophysics Data System (ADS)

Pavlyuk, Olga N.; Trebukhova, Yulia A.; Tarasov, Vitalyi G.

2009-09-01

In May, 2007 we sank the remains of a Minke whale ( Balaenoptera acutorostrata) in the East Sea, Peter the Great Bay, at 30 m of water near the coast of Big Pelis Island. In the present study we describe the nematode communities in sediments under the implanted whale carcass. Abundance of nematodes increased with the distance from the carcass. Dominant trophic group was non-selective deposit feeders. The highest values of indexes of a specific diversity and evenness were noted in sediments under the whale, while domination index occurred at the highest distance from the whale. The suggestion is made that the cause of low density of nematodes in sediments under the whale is an extreme increase in number of macrofaunal animals, and predation and food competition between macro- and meiofauna. The changes noted in nematode assemblages living in an implanted whale in shallow waters are similar to those in deep-sea assemblages.

Assessing condition of macroinvertebrate communities and sediment toxicity in the St. Lawrence River at Massena Area-of-Concern

USGS Publications Warehouse

Duffy, Brian T.; Baldigo, Barry P.; Smith, Alexander J.; George, Scott D.; David, Anthony M.

2016-01-01

In 1972, the USA and Canada agreed to restore the chemical, physical, and biological integrity of the Great Lakes ecosystem under the first Great Lakes Water Quality Agreement. In subsequent amendments, part of the St. Lawrence River at Massena, New York and segments of three tributaries, were designated as an Area of Concern (AOC) due to the effects of polychlorinated biphenyls (PCBs), lead and copper contamination, and habitat degradation and resulting impairment to several beneficial uses. Because sediments have been largely remediated, the present study was initiated to evaluate the current status of the benthic macroinvertebrate (benthos) beneficial use impairment (BUI). Benthic macroinvertebrate communities and sediment toxicity tests using Chironomus dilutus were used to test the hypotheses that community condition and sediment toxicity at AOC sites were not significantly different from those of adjacent reference sites. Grain size was found to be the main driver of community composition and macroinvertebrate assemblages, and bioassessment metrics did not differ significantly between AOC and reference sites of the same sediment class. Median growth of C. dilutus and its survival in three of the four river systems did not differ significantly in sediments from AOC and reference sites. Comparable macroinvertebrate assemblages and general lack of toxicity across most AOC and reference sites suggest that the quality of sediments should not significantly impair benthic macroinvertebrate communities in most sites in the St. Lawrence River AOC.

Late Holocene environmental changes in a mesotidal estuary from Patagonia, Argentina

NASA Astrophysics Data System (ADS)

Espinosa, Marcela; Escandell, Alejandra; Velez Agudelo, Camilo

2016-04-01

Two sediment records from the lower valley of Negro River, Patagonia, Argentina (41°01´S; 62°47'W) spanning for the last 2000 cal yrs BP were analyzed according to diatoms and sediments contents. The river originates at the junction of the Neuquén and the Limay Rivers, Northern Patagonia, and discharges more than 1000 m3/s to the South Atlantic Ocean. Mesotidal conditions dominate at the inlet (2.95 m) affecting the lower valley (about 20 km) where salinity decreases drastically in the last 2 km. Fossil diatom assemblages and grain size were studied from two cores located at 1.5 km (Villarino site) and 12 km (Criadero site) from the inlet. Samples for modern diatom analyses were collected from the littoral zone at eleven sites along the river. Physical and chemical variables were quantified representing the maximum heterogeneity along the aquatic environment. Turbidity, salinity, conductivity, pH and temperature data were obtained in situ during summer and winter. In addition, a surface sediment sample was taken for grain size analysis and organic matter content, and water samples were taken to analyze nutrients and major ions following standard methods. The diatom content of modern sediment samples were studied in order to achieve ecological information useful as modern analogous for Patagonian rivers. Diatom zones were characterized by constrained incremental sum of squares cluster analysis (single linkage, Euclidean distance) in the fossil sequences. Fossil and modern diatom assemblages were compared with Detrended Correspondence Analysis (DCA). A total of 77 samples (modern and fossils) were analyzed and more than 200 taxa were identified. Diatom assemblages showed distinct abundance patterns in relation to salinity with a shift from communities dominated by marine/brackish taxa in lower sites to communities dominated by freshwater taxa in the middle and upper course of the river. The record of Criadero core (12 km from the inlet) began 2000 cal yrs BP with a shallow vegetated brackish/freshwater environment represented by Surirella brebissonii, Epithemia adnata and Rhopalodia gibba. The environment evolved gradually into marine conditions with dominance of Paralia sulcata, Delphineis surirella, Raphoneis amphiceros and Cymatosira belgica (tidal channel). Finally, marine brackish aerophilous taxa indicate the development of a saltmarsh. Villarino core (1.5 km from the inlet) represents the infilling of the estuary during the last 1300 cal yrs BP with the dominance of the marine/brackish tychoplankton taxa Paralia sulcata. The fossil assemblages of the two studied sequences showed similarity with modern assemblages of the lower valley of the river. Considering the strong influence of salinity changes on diatom assemblages, tidal effects are the main controlling factor for the composition and distribution of diatoms along mesotidal estuaries from Patagonia. The knowledge of palaeoenvironmental conditions derived from fossil diatom assemblages is very important to infer man-made changes in coastal areas and can be used as reference for the assessment of recent coastal changes (dredging, harbour construction, flood control improvements, pollution).

Soft-sediment deformation produced by tides in a meizoseismic area, Turnagain Arm, Alaska

USGS Publications Warehouse

Greb, S.F.; Archer, A.W.

2007-01-01

Turnagain Arm is a semidiurnal hypertidal estuary in southeastern Alaska with a recorded tidal range of 9 m. Contorted bedding and flow rolls preserved in tidal sediments within the estuary have previously been interpreted as resulting from the Mw 9.2 Great Alaskan earthquake of 1964. Horizons of flow rolls between undeformed beds in sediments and rock strata have been used to infer ancient earthquakes in other areas. Although many types of soft-sediment deformation structures can be formed by earthquakes, observations of sedimentation on tidal flats in the inner parts of Turnagain Arm in the summers of 2003 and 2004 show that a wide range of soft-sediment deformation structures, similar to those inferred to have been formed by earthquakes, can form in macrotidal estuaries in the absence of seismic shock. During sedimentation rate measurements in 2004, soft-sediment deformation structures were recorded that formed during one day's tide, either in response to overpressurization of tidal flats during rapid tidal drawdown or by shear stress exerted on the bed by the passage of a 1.8 m tidal bore. Structures consisted of How rolls, dish structures, flames, and small dewatering pipes in a bed 17 cm thick. In the future, if the flow rolls in Turnagain Arm were found in isolated outcrops across an area 11 km in length, in an estuary known to have been influenced by large-magnitude earthquakes, would they be interpreted as seismites? These examples show that caution is needed when using horizons of flow rolls to infer paleoseismicity in estuarine deposits because many of the mechanisms (tidal flux, tidal bores, slumping, flooding) that can cause deformation in rapidly deposited, unconsolidated silts and sands, are orders of magnitude more common than great earthquakes. ?? 2007 The Geological Society of America.

Meiofauna assemblages of the Condor Seamount (North-East Atlantic Ocean) and adjacent deep-sea sediments

NASA Astrophysics Data System (ADS)

Zeppilli, Daniela; Bongiorni, Lucia; Cattaneo, Antonio; Danovaro, Roberto; Santos, Ricardo Serrão

2013-12-01

Seamounts are currently considered hotspots of biodiversity and biomass for macro- and megabenthic taxa, but knowledge of meiofauna is still limited. Studies have revealed the existence of highly diverse meiofauna assemblages; however most data are mainly qualitative or focused only on specific groups, thus preventing comparisons among seamounts and with other deep-sea areas. This study, conducted on Condor Seamount (Azores, North-East Atlantic Ocean), describes variation in abundance, biomass, community structure and biodiversity of benthic meiofauna from five sites located on the Condor Seamount: and one site away from the seamount. While the summit of the seamount hosted the highest alpha biodiversity, the flanks and the bases showed a rich meiofauna assemblage in terms of abundance and biomass. The observed marked differences in grain size composition of sediments reflected the oceanographic conditions impacting different sectors of the Condor seamount, and could play an important role in the spatial distribution of different meiofaunal taxa. Trophic conditions (biochemical composition of organic matter) explained 78% of the variability in the meiofauna biomass pattern while sediment grain influenced the vertical distribution of meiofauna and only partially explained meiofaunal taxa composition. This study provides a further advancement in the knowledge of meiofaunal communities of seamounts. Only a deeper understanding of the whole benthic communities (including meiofauna) will allow to elaborate effective management and conservation tools for seamount ecosystems.

Spatial patterns of lacustrine fish assemblages in a catchment of the Mississippi Alluvial Valley

USGS Publications Warehouse

Andrews, Caroline S.; Miranda, Leandro E.; Goetz, Daniel B.; Kroger, Robert

2014-01-01

Off-channel floodplain lakes are among the first landscape elements to vanish as a consequence of agricultural development. These habitats tend to accumulate sediments at fast rates and are converted to agricultural land as soon as suitable drainage can be attained. Considering that off-channel lakes with limited connectivity contribute greatly to the heterogeneity of fish assemblages, such losses pose great concerns to conservation of biodiversity.

Pollen preservation and Quaternary environmental history in the southeastern United States

DOE Office of Scientific and Technical Information (OSTI.GOV)

Delcourt, P.A.; Delcourt, H.R.

Reconstructions of Quaternary environmental history based upon modern pollen/vegetation/climate calibrations are more tenable if the factors responsible for variation in pollen assemblages are evaluated. Examination of the state of preservation of Quaternary palynomorphs provides quantitative data concerning the degree of information loss due to alteration of pollen assemblages by syndepositional and post-depositional deterioration. The percentage, concentration, and influx values for total indeterminable pollen are useful criteria in providing an objective and quantitative basis for evaluating the comparability of pollen spectra within and between sites. Supporting data concerning sediment particle-size distribution, organic matter content, and concentration, influx, and taxonomic composition ofmore » both determinable pollen and plant macrofossils aid in reconstructing past depositional environments. The potential is high for deterioration of pollen in sediments from the southeastern United States, although considerable variation is found in both kind and degree of deterioration between lacustrine and alluvial sites of different ages and in different latitudes. Modern analogs are a basis for late Quaternary environmental reconstructions when pollen deterioration has not significantly biased the information content of fossil pollen assemblages.« less

Land use structures fish assemblages in reservoirs of the Tennessee River

USGS Publications Warehouse

Miranda, Leandro E.; Bies, J. M.; Hann, D. A.

2015-01-01

Inputs of nutrients, sediments and detritus from catchments can promote selected components of reservoir fish assemblages, while hindering others. However, investigations linking these catchment subsidies to fish assemblages have generally focussed on one or a handful of species. Considering this paucity of community-level awareness, we sought to explore the association between land use and fish assemblage composition in reservoirs. To this end, we compared fish assemblages in reservoirs of two sub-basins of the Tennessee River representing differing intensities of agricultural development, and hypothesised that fish assemblage structure indicated by species percentage composition would differ among reservoirs in the two sub-basins. Using multivariate statistical analysis, we documented inter-basin differences in land use, reservoir productivity and fish assemblages, but no differences in reservoir morphometry or water regime. Basins were separated along a gradient of forested and non-forested catchment land cover, which was directly related to total nitrogen, total phosphorous and chlorophyll-a concentrations. Considering the extensive body of knowledge linking land use to aquatic systems, it is reasonable to postulate a hierarchical model in which productivity has direct links to terrestrial inputs, and fish assemblages have direct links to both land use and productivity. We observed a shift from an invertivore-based fish assemblage in forested catchments to a detritivore-based fish assemblage in agricultural catchments that may be a widespread pattern among reservoirs and other aquatic ecosystems.

Demersal and larval fish assemblages in the Chukchi Sea

NASA Astrophysics Data System (ADS)

Norcross, Brenda L.; Holladay, Brenda A.; Busby, Morgan S.; Mier, Kathryn L.

2010-01-01

A multidisciplinary research cruise was conducted in the Chukchi Sea in summer 2004 during which we investigated assemblages of small demersal fishes and ichthyoplankton and the water masses associated with these assemblages. This study establishes a baseline of 30 demersal fish and 25 ichthyoplankton taxa in US and Russian waters of the Chukchi Sea. Presence/absence of small demersal fish clustered into four assemblages: Coastal Fishes, Western Chukchi Fishes, South Central Chukchi Fishes, and North Central Chukchi Fishes. Habitats occupied by small demersal fishes were characterized by sediment type, bottom salinity, and bottom temperature. Abundance of ichthyoplankton grouped into three assemblages with geographical extent similar to that of the bottom assemblages, except that there was a single assemblage for Central Chukchi Fishes. Water-column temperature and salinity characterized ichthyoplankton habitats. Three water masses, Alaska Coastal Water, Bering Sea Water, and Winter Water, were identified from both bottom and depth-averaged water-column temperature and salinity. A fourth water mass, Resident Chukchi Water, was identified only in the bottom water. The water mass and habitat characteristics with which demersal and larval fish assemblages were associated create a baseline to measure anticipated effects of climate change that are expected to be most severe at high latitudes. Monitoring fish assemblages could be a tool for assessing the effects of climate change. Climate-induced changes in distributions of species would result in a restructuring of fish assemblages in the Chukchi Sea.

Diatoms and stratigraphically significant silicoflagellates from the Atlantic Margin Coring Project and other Atlantic margin sites

USGS Publications Warehouse

Abbott, W.H.

1980-01-01

In 1976, 19 sites were cored along the U.S. Atlantic Continental Shelf and Slope by the Oceanographic Branch of the U.S. Geological Survey aboard the Glomar Conception. Only 6 sites contained siliceous microfossil assemblages of sufficient quantity and quality for biostratigraphic study. Two of the sites, AMCOR (Atlantic Margin Coring Project) 6002 and AMCOR 6011, contained good Miocene assemblages: a small Pleistocene assemblage occurred at the top of AMCOR 6002. A Late Miocene to Early Pliocene assemblage was encountered in AMCOR 6007B. AMCOR 6013, 6019, and 6021 contained Pleistocene assemblages. In addition to the AMCOR cores, 3 additional Atlantic Margin cores were studied. These were the JOIDES 1 (Caldrill) core, and Atlantic Slope Project (ASP) cores 10 and 22. JOIDES 1 contains a Middle Miocene assemblage similar to AMCOR 6002. ASP 10 contains a Lower Pliocene assemblage and ASP 22 contains a Middle to Late Oligocene and a Pleistocene assemblage. Siliceous assemblages at all sites consisted mainly of shallow shelf species, including brackish and marine benthics and occasionally freshwater forms. Although planktonic forms were present, they were few and most were extant cosmopolitan species. This makes it difficult to correlate the biostratigraphy of the sediments with siliceous microfossil zonations from other oceans. The only biostratigraphic zonations for Atlantic Shelf diatom assemblages are for the Miocene.

Investigating the organic carbon cycle and the anaerobic oxidation of methane in the Guaymas Basin: a biogeochemical approach

NASA Astrophysics Data System (ADS)

Cathalot, C.; Decker, C.; Caprais, J.; Ruffine, L.; Le Bruchec, J.; Olu, K.

2013-12-01

The Guaymas Basin is a pretty unique environment located in the Gulf of California and characterized by the emanation of fluids enriched in hydrocarbon, mainly methane, and sulfides. In this peculiar environment, both cold seeps and hydrothermal vents co-exist very closely, and are separated only by a few kilometers. In addition, highly productive surface waters and strong terrestrial inputs are responsible for strong sedimentation rates in this area. This special geological system allows for the development of various and complex macrofaunal and/or bacterial assemblages, based on chemosynthetic activity. These sea-bottom communities have been previously described [1,2] and several studies have demonstrated the occurrence of Anaerobic Oxidation of Methane (AOM) in the shallow sediment layers. Nevertheless, the quantification of the biogeochemical processes (e.g. rates, relative proportions) involved in both ecosystems in relation with the associated communities, and their role in the local organic carbon (OC) cycle is still lacking. Using a diagenetic modeling approach, this study aims at studying the OC production and recycling processes by describing the biogeochemical pathways and their associated rates in the ecosystems from the Guaymas Basin. Twelve stations presenting distinct biological assemblages (microbial mats, vesicomyids and bare sediment) were selected among both cold-seeps and hydrothermal vents sites from the Guaymas basin. A transport-reaction model including respiration, sulfate reduction, methanogenesis and AOM was developed and applied to each station. To constrain the model, at each station, cores were sampled using an ROV and the pore-waters extracted using Rhizon syringes. Pore-water concentrations of CH4, SO42-, Cl- and H2S were then measured. In addition, ex situ O2 microprofiles equipped with microsensors and in situ incubations using benthic chambers were performed to estimate the sediment uptake rates (O2, H2S, CH4). The overall dataset was used to feed the model. The preliminary results indicate 1) significant differences of biogeochemical processes between the different biological assemblages and 2) between the cold seeps and hydrothermal vents sites. Model outputs show the occurrence of AOM and sulfate reduction at all sites except the reference (i.e. bare sediment) confirming hence the chemosynthetic activity (OC production) within the specific biological assemblages (mats and Vesicomyid). AOM in bacterial mats was more active in hydrothermal vents than in cold-seeps. In addition, the results indicate strong sulfate reduction rates in Vesicomyids assemblages but with a clear mismatch between modeled and measured H2S concentrations in the sediment: such differences reflect the symbiosis chemosynthetic activity (i.e. the H2S consumption) within the organisms. This integrated model-data approach proves hence to be useful to infer the biogeochemical functioning of biological ecosystems. [1] Kallmeyer, J. & Boetius, A (2004): Applied and Environmental Microbiology, 70, 2, 1231-1233. [2] Biddle J. F. et al. (2012). ISME J. 6 1018-1031

Brachyuran crab community structure and associated sediment reworking activities in pioneer and young mangroves of French Guiana, South America

NASA Astrophysics Data System (ADS)

Aschenbroich, Adélaïde; Michaud, Emma; Stieglitz, Thomas; Fromard, François; Gardel, Antoine; Tavares, Marcos; Thouzeau, Gérard

2016-12-01

This study in French Guiana evaluates the changes of crab assemblages and their bioturbation activities between mangrove early stages (pioneer and young mangrove) and within stages by taking their spatial heterogeneity (tidal channels, flat areas, pools) into account. The results show differences in crab assemblage structure between and within the early stages of mangrove in relation to microhabitat and sediment characteristics. The sediment reworking rates are a function of the biomass or density of particular species (Ucides cordatus, Uca cumulanta) and burrower functional groups. Crab species or functional interactions mediate changes in sediment reworking rates suggesting the need to consider entire benthic communities rather than single species. This study suggests that the role of the microhabitat in determining the biologically-induced sediment reworking rates depends on the age of the mangrove. Feeding activity results in a sediment turnover of 11.7 ± 9.7 gdw m-2 day-1 and 6.8 ± 3.0 gdw m-2 day-1 in the pioneer and young mangroves, respectively. Burrow maintenance excavates 40.5 ± 7.4 gdw m-2 day-1 and 251.3 ± 419.7 gdw m-2 day-1 in the pioneer and young mangroves, respectively. Upscaling to the studied area (Sinnamary estuary: 6 km2), shows that 500 tons.day-1 and 20 tons.day-1 of sediments could be excavated and pelletized, respectively, during the spring tides of the dry season. Thus, biological sediment reworking would greatly contribute to the sedimentary dynamics of the Guianese mangroves under Amazonian influence.

An unusual early Holocene diatom event north of the Getz Ice Shelf (Amundsen Sea): Implications for West Antarctic Ice Sheet development

NASA Astrophysics Data System (ADS)

Esper, O.; Gersonde, R.; Hillenbrand, C.; Kuhn, G.; Smith, J.

2011-12-01

Modern global change affects not only the polar north but also, and to increasing extent, the southern high latitudes, especially the Antarctic regions covered by the West Antarctic Ice Sheet (WAIS). Consequently, knowledge of the mechanisms controlling past WAIS dynamics and WAIS behaviour at the last deglaciation is critical to predict its development in a future warming world. Geological and palaeobiological information from major drainage areas of the WAIS, like the Amundsen Sea Embayment, shed light on the history of the WAIS glaciers. Sediment records obtained from a deep inner shelf basin north of Getz Ice Shelf document a deglacial warming in three phases. Above a glacial diamicton and a sediment package barren of microfossils that document sediment deposition by grounded ice and below an ice shelf or perennial sea ice cover (possibly fast ice), respectively, a sediment section with diatom assemblages dominated by sea ice taxa indicates ice shelf retreat and seasonal ice-free conditions. This conclusion is supported by diatom-based summer temperature reconstructions. The early retreat was followed by a phase, when exceptional diatom ooze was deposited around 12,500 cal. years B.P. [1]. Microscopical inspection of this ooze revealed excellent preservation of diatom frustules of the species Corethron pennatum together with vegetative Chaetoceros, thus an assemblage usually not preserved in the sedimentary record. Sediments succeeding this section contain diatom assemblages indicating rather constant Holocene cold water conditions with seasonal sea ice. The deposition of the diatom ooze can be related to changes in hydrographic conditions including strong advection of nutrients. However, sediment focussing in the partly steep inner shelf basins cannot be excluded as a factor enhancing the thickness of the ooze deposits. It is not only the presence of the diatom ooze but also the exceptional preservation and the species composition of the diatom assemblage, which point to specific scenarios involving e.g. changes in the food web that can be related to warmer surface water temperatures. Such warming of shelf waters may be related with an overshooting Atlantic Meridional Overturning Circulation (AMOC) and strong injection of warmer North Atlantic Deep Water into the Southern Ocean water masses at Termination I as reported by [2]. Such finding may highlight the effects of AMOC changes on Antarctic ice shelf extent and coastal ecosystems. [1] Hillenbrand et al., 2010. J. Quat. Sci. 25 (3), 280-295. [2] Barker et al., 2010. Nature Geosci. 3, 567-571.

Recent benthic foraminifera assemblages from mangrove swamp and channels of Abu Dhabi (UAE)

NASA Astrophysics Data System (ADS)

Fiorini, Flavia; Lokier, Stephen W.; Odeh, Weaam A. S. Al; Paul, Andreas; Song, Jianfeng; Freeman, Mark; Michel, Françoise

2017-04-01

Zonation of Recent mangrove environments can be defined using benthic foraminifera, however, little is known about foraminifera from mangrove environments of the Persian/Arabian Gulf. The objective of this study is to produce a detailed micropaleontological and sedimentological analysis to identify foraminiferal associations from mangrove swamps and channels located on the eastern side of Abu Dhabi Island (UAE). Detailed sediment sampling collection in mangal environments of Eastern Abu Dhabi was carried out to assess the distribution of benthic foraminifera in different sedimentary facies in the mangal and in the surrounding natural environments of the upper and lower intertidal area (mud flats and channels). A 100 m transect across a natural channel in a mangal on the eastern side of Abu Dhabi Island was sampled in detail for sedimentological and foraminiferal analysis. Forty-seven samples were collected at 2 meter intervals along the transect in a number of different sedimentary facies including; fine sediment in areas exposed during low tide and close to mangrove trees (Avicennia marina), fine sediment rich in leaf material, coarse sediment in channels, and coarse sediments with a shell lag. At each sampling location environmental parameters were recorded, including water depth, salinity, temperature and pH. Samples collected for foraminiferal analysis were stained in rose Bengal in order to identify living specimens. Samples collected on the mud flat at the margin of the channel show a living foraminiferal assemblage characterised by abundant foraminifera belonging to the genera Ammonia, Elphidium, Cribroelphidium, Triloculina, Quinqueloculina, Sigmoilinita, Spiroloculina, Peneroplis and Spirolina. Samples collected in the lower (wet) intertidal area close to Avicennia marina roots, presented a low-diversity assemblage mostly comprising small-sized opportunistic foraminifera of the genera Ammonia and Cribroelphidium along with rare Triloculina and Quinqueloculina. Samples from the upper intertidal areas (often dry) close to Avicennia marina roots and leaf material, produced an assemblage exclusively composed of small-sized opportunistic Ammonia and Cribroelphidium, together with abundant specimensof agglutinated foraminifera belonging to the genera Trochammina. The samples collected in the higher energy settings (channels) were rich in foraminiferal tests, rare living forms were found in the coarser grained facies. The more abundant genera of foraminifera in these facies were miliolids belonging to the genera Triloculina, Quinqueloculina, Sigmoilina and epiphytic larger benthic foraminifera belonging to the genera Peneroplis, Spirolina and Sorites. The distribution of Recent benthic foraminifera from the mangrove environments of the Abu Dhabi region present a powerful tool for constructing a zonation of marine coastline environments and can be employed as a modern analogue for interpreting the depositional environment of ancient coastline sediments.

The Role of the Sedimentary Regime in Shaping the Distribution of Subtidal Sandbank Environments and the Associated Meiofaunal Nematode Communities: An Example from the Southern North Sea

PubMed Central

Schratzberger, Michaela; Larcombe, Piers

2014-01-01

We combined sediment and faunal data to explore the role of the sedimentary regime in shaping the distribution of subtidal sandbank environments and the associated meiofaunal nematode communities at Broken Bank and Swarte Bank, in the southern North Sea. A variety of sediment transport processes occur in the area, differing in the frequency and magnitude of sediment mobility, and the continuum between erosion, translation and sediment accumulation. The seabed contained a variety of bedforms, including longitudinal furrows, and small to very large sandwaves. The bed sediments were dominated by fine and medium sands, with admixtures of silt and gravel. Based on sedimentary bedforms and grain size analysis, a total of 11 sedimentary facies were delineated, of which 8 were analysed in detail for their relationships with the meiofauna. The sedimentary facies fell clearly into groups of facies, respectively representing high, high-moderate and moderate, and episodic sediment mobility. For those sedimentary facies where daily movement of sediments and bedforms occurred (‘high’ sediment mobility), the resulting spatially homogeneous environments were dominated by an impoverished nematode community comprising small deposit feeders and large predators. Resistance to sediment movement and the ability to exploit alternative food sources were prominent functional features of the successful colonisers. Those facies characterised by relatively infrequent sediment mobility (‘episodic’ and ‘high-moderate and moderate’ sediment mobility) comprised a heterogeneous suite of benthic habitats, containing taxonomically and functionally diverse assemblages of nematodes of various sizes, feeding types and reproductive potential. Faunal distribution patterns here indicated trade-offs between the resistance to sediment movement, environmental tolerance and competitive abilities. Our focus on diverse assemblages of organisms with high turnover times, inhabiting highly dynamic sedimentary environments, has revealed new animal-sediment relationships of relevance to pure and applied science. PMID:25296029

Vertebrate assemblages from the early Late Cretaceous of southeastern Morocco: An overview

NASA Astrophysics Data System (ADS)

Cavin, L.; Tong, H.; Boudad, L.; Meister, C.; Piuz, A.; Tabouelle, J.; Aarab, M.; Amiot, R.; Buffetaut, E.; Dyke, G.; Hua, S.; Le Loeuff, J.

2010-07-01

Fossils of vertebrates have been found in great abundance in the continental and marine early Late Cretaceous sediments of Southeastern Morocco for more than 50 years. About 80 vertebrate taxa have so far been recorded from this region, many of which were recognised and diagnosed for the first time based on specimens recovered from these sediments. In this paper, we use published data together with new field data to present an updated overview of Moroccan early Late Cretaceous vertebrate assemblages. The Cretaceous series we have studied encompasses three Formations, the Ifezouane and Aoufous Formations, which are continental and deltaic in origin and are often grouped under the name "Kem Kem beds", and the Akrabou Formation which is marine in origin. New field observations allow us to place four recognised vertebrate clusters, corresponding to one compound assemblage and three assemblages, within a general temporal framework. In particular, two ammonite bioevents characterise the lower part of the Upper Cenomanian ( Calycoceras guerangeri Zone) at the base of the Akrabou Formation and the upper part of the Lower Turonian ( Mammites nodosoides Zone), that may extend into the Middle Turonian within the Akrabou Formation, and allow for more accurate dating of the marine sequence in the study area. We are not yet able to distinguish a specific assemblage that characterises the Ifezouane Formation when compared to the similar Aoufous Formation, and as a result we regard the oldest of the four vertebrate "assemblages" in this region to be the compound assemblage of the "Kem Kem beds". This well-known vertebrate assemblage comprises a mixture of terrestrial (and aerial), freshwater and brackish vertebrates. The archosaur component of this fauna appears to show an intriguingly high proportion of large-bodied carnivorous taxa, which may indicate a peculiar trophic chain, although collecting biases alter this palaeontological signal. A small and restricted assemblage, the OT1 assemblage, possibly corresponds to a specific, localised ecosystem within the Kem Kem beds compound assemblage. Microfossils and facies from the Aoufous Formation, corresponding to the top of the compound assemblage, provide evidence of extremely abiotic conditions (hypersalinity), and thus of great environmental instability. At the base of the Akrabou Formation the first ammonite bioevent, Neolobites, corresponds to the onset of the marine transgression in the early Late Cenomanian while the Agoult assemblage (Late Cenomanian?) contains a variety of small fish species that have Central Tethyan affinities. Finally, the youngest Mammites bioevent in the late Early Turonian corresponds to a deepening of the marine environment: this sequence is isochronous with the Goulmima assemblage, a diverse collection of fish and other marine taxa, and shows affinities with taxa from the South Atlantic, the Central Tethys and the Western Interior seaway of North America, and further highlights the biogeographical importance of these North African Late Cretaceous assemblages.

Geochemistry, faunal composition and trophic structure in reducing sediments on the southwest South Georgia margin

NASA Astrophysics Data System (ADS)

Bell, James B.; Aquilina, Alfred; Woulds, Clare; Glover, Adrian G.; Little, Crispin T. S.; Reid, William D. K.; Hepburn, Laura E.; Newton, Jason; Mills, Rachel A.

2016-09-01

Despite a number of studies in areas of focused methane seepage, the extent of transitional sediments of more diffuse methane seepage, and their influence upon biological communities is poorly understood. We investigated an area of reducing sediments with elevated levels of methane on the South Georgia margin around 250 m depth and report data from a series of geochemical and biological analyses. Here, the geochemical signatures were consistent with weak methane seepage and the role of sub-surface methane consumption was clearly very important, preventing gas emissions into bottom waters. As a result, the contribution of methane-derived carbon to the microbial and metazoan food webs was very limited, although sulfur isotopic signatures indicated a wider range of dietary contributions than was apparent from carbon isotope ratios. Macrofaunal assemblages had high dominance and were indicative of reducing sediments, with many taxa common to other similar environments and no seep-endemic fauna, indicating transitional assemblages. Also similar to other cold seep areas, there were samples of authigenic carbonate, but rather than occurring as pavements or sedimentary concretions, these carbonates were restricted to patches on the shells of Axinulus antarcticus (Bivalvia, Thyasiridae), which is suggestive of microbe-metazoan interactions.

Geochemistry, faunal composition and trophic structure in reducing sediments on the southwest South Georgia margin

PubMed Central

Aquilina, Alfred; Woulds, Clare; Glover, Adrian G.; Little, Crispin T. S.; Hepburn, Laura E.; Newton, Jason; Mills, Rachel A.

2016-01-01

Despite a number of studies in areas of focused methane seepage, the extent of transitional sediments of more diffuse methane seepage, and their influence upon biological communities is poorly understood. We investigated an area of reducing sediments with elevated levels of methane on the South Georgia margin around 250 m depth and report data from a series of geochemical and biological analyses. Here, the geochemical signatures were consistent with weak methane seepage and the role of sub-surface methane consumption was clearly very important, preventing gas emissions into bottom waters. As a result, the contribution of methane-derived carbon to the microbial and metazoan food webs was very limited, although sulfur isotopic signatures indicated a wider range of dietary contributions than was apparent from carbon isotope ratios. Macrofaunal assemblages had high dominance and were indicative of reducing sediments, with many taxa common to other similar environments and no seep-endemic fauna, indicating transitional assemblages. Also similar to other cold seep areas, there were samples of authigenic carbonate, but rather than occurring as pavements or sedimentary concretions, these carbonates were restricted to patches on the shells of Axinulus antarcticus (Bivalvia, Thyasiridae), which is suggestive of microbe–metazoan interactions. PMID:27703692

Environmental factors controlling benthic foraminiferal distribution in Hurghada area, Red Sea coast, Egypt

NASA Astrophysics Data System (ADS)

Mounir El-Kahawy, Ramadan; El-Wahab, Mohamed Abd

2017-04-01

Benthic foraminiferal assemblages were investigated at Hurghada on the Red Sea coast of Egypt, to determine the distribution and their common environmental factors that control on this distribution. 43 sediment samples were collected and environmental factors (T°C, pH, and salinity ‰), water depth, grain size, organic matter and carbonate content were measured. Faunal abundance (14-1755 tests/g) with an average 709 tests/g, and faunal diversity (6-39 specimens) with an average 31 specimen. Cluster analysis was divided the Hurghada site into four distinct biotopes based on the faunal data: Biotope (1) is dominated by a Quinqueloculina seminula& Quinqueloculina laevigata, and Triloculina terquemiana assemblage. Biotope (2) is dominated by a Sorites marginalis & Triloculina trigonula assemblage. Biotope (3) is dominated by an Amphistegina lessonii, Ammonia beccarii and Elphidium spp assemblage. Biotope (4) is dominated by a Peneroplis planatus& Coscinospira hemprichii& Sorites orbiculus and Neorotalia calcar assemblage. Some of the recorded foraminiferal tests showed abnormalities in their apertures, coiling and shape of chambers. The distribution of benthic foraminiferal species is governed by environmental factors such as salinity, temperature, substrates-type, water depth and pH. P. planatus and C. hemprichii positively correlate with extreme salinity and temperature, indicating that these species reflect a warm, arid climate conditions. Aside, the heavy metals (Cu, Cd, Zn, Pb, Ni and Mn) concentrations in the sediment samples were analyzed using ICP-OES. The comparative study between the faunal content and the heavy metals enrichments in each sample displayed positive character indicating the worsening of the environmental conditions. Keywords: benthic foraminifera, Hurghada, Red Sea, Egypt

Ecology of free-living nematodes from the continental shelf of the central great barrier reef province

NASA Astrophysics Data System (ADS)

Tietjen, John H.

1991-05-01

Nematode assemblages from five sites on the continental shelf of the central Great Barrier Reef (GBR) along a transect ranging from inshore muddy quartz to offshore carbonate sands were examined in austral spring (October 1987) and summer (January 1988). Assemblages at all sites were characterized by very even distributions (low dominance) of families, genera and species. Average per cent abundances of the dominant family (Chromadoridae), genus ( Theristus) and species ( Spilophorella paradoxa), respectively, were 16, 10 and 8% of the total number of specimens identified. The diversity of species ( H' = 3·35-4·08) from the GBR was higher than that normally calculated for shelf nematode assemblages; species richness (SR = 10·64-16·67) and evenness (J' = 0·82-0·91) values approximate those characteristic of deep-sea nematode assemblages, suggesting equitable exploitation of the interstitial environment on the GBR shelf by many species. This was also indicated by a nodal analysis of the 22 dominant species, which exhibited no strong preference for any particular sediment or site. Non-selective deposit and epistrate feeders were the most abundant trophic types among the nematodes. The abundance of non-selective deposit feeders was significantly greater in the summer than spring assemblages, accompanying differences also observed in the per cent composition of several species. Shortterm fluctuations in species composition and high species diversity of nematodes on the central Great Barrier Reef shelf may be the result of high sediment heterogeneity (caused by cyclones and frequent prawn trawling), a rich bacterial flora, continuous warm temperatures and low macroinfaunal abundance.

Syn- and post-sedimentary controls on clay mineral assemblages in a tectonically active basin, Andean Argentinean foreland

NASA Astrophysics Data System (ADS)

Do Campo, Margarita; Nieto, Fernando; del Papa, Cecilia; Hongn, Fernando

2014-07-01

In the northern part of the Calchaquí Valley (NW Argentina), Palaeogene Andean foreland sediments are represented by a 1400-metre-thick continental succession (QLC: Quebrada de Los Colorados Formation) consisting of claystones, siltstones, sandstones, and conglomerates representing sedimentation in fluvial-alluvial plains and alluvial fan settings. To understand the main syn- and postsedimentary variables controlling the clay mineral assemblages of this succession, we have studied the fine-grained clastic sediments by X-ray diffraction and electron microscopy, along with a detailed sedimentary facies analysis, for two representative sections. In the northern section, the whole succession was sampled and analysed by XRD, whereas in the second section, a control point 15 km to the south, only the basal levels were analysed. The XRD study revealed a strong contrast in clay mineral assemblages between these two sections as well as with sections in the central Calchaquí Valley studied previously. In the northernmost part of the study area, a complete evolution from smectite at the top to R3 illite/smectite mixed-layers plus authigenic kaolinite at the bottom, through R1-type mixed-layers in between, has been recognized, indicating the attainment of late diagenesis. In contrast, the clay mineral assemblages of equivalent foreland sediments cropping out only 15 km to the south contain abundant smectite and micas, subordinate kaolinite and chlorite, and no I/S mixed-layers to the bottom of the sequence. Early diagenetic conditions were also inferred in a previous study for equivalent sediments of the QLC Formation cropping out to the south, in the central Calchaquí Valley, as smectite occurs in basal strata. Burial depths of approximately 3000 m were estimated for the QLC Formation in the central and northern Calchaquí Valley; in addition, an intermediate to slightly low geothermal gradient can be considered likely for both areas as foreland basins are regarded as hypothermal basins. Consequently, the attainment of late diagenesis in the northernmost study area cannot be explained by significant differences in burial depth nor in geothermal gradient in relation to the section 15 km to the south nor with the central Calchaquí Valley. The formation of R3 mixed-layer I/S and authigenic kaolinite in the northern study area was most likely controlled by the circulation of hot, deep fluids along the reverse faults that bounded the Calchaquí valley. These faults were active during the Cenozoic, as evidenced by the syndepositional deformation features preserved in the studied sediments. Stress could also have been a driving force in burial diagenesis at the R3 mixed-layer I/S stage in these young continental sediments.

Rock magnetic properties of sediments from Lake Sanabria and its catchment (NW Spain): paleoenvironmental implications

NASA Astrophysics Data System (ADS)

Larrasoaña, J. C.; Borruel, V.; Gómez-Paccard, M.; Rico, M.; Valero-Garces, B.; Moreno-Caballud, A.; Soto, R.

2013-12-01

Lake Sanabria is located in the NW Spanish mountains at 1000 m a.s.l., and constitutes the largest lake of glacial origin in the Iberian Peninsula. Here we present an environmental magnetic study of a Late Pleistocene-Holocene sediment core from Lake Sanabria and from different lithologies that crop out in its catchment, which includes Paleozoic plutonic, metamorphic and vulcanosedimentary rocks, and Quaternary deposits of glacial origin. This study was designed to complement sedimentologic and geochemical studies aimed at unraveling the climatic evolution of the NW Iberian Peninsula during the last deglaciation. Our results indicate that magnetite and pyrrhotite dominate the magnetic assemblage of both the sediments from the lower half of the studied sequence (25.6 - 13 cal kyr BP) deposited in a proglacial environment, and the Paleozoic rocks that make up most of the catchment of the lake. The occurrence of these minerals both in the catchment rocks and in the lake sediments indicates that sedimentation was then driven by the erosion of a glacial flour, which suffered minimal chemical transformation in response to a rapid and short routing to the lake. Sediments from the upper half of the studied sequence, accumulated after 12.4 cal kyr BP in a fluviolacustrine environment, contain magnetite and greigite. This points to a prominent role of post-depositional reductive dissolution, driven by a sharp increase in the accumulation of organic matter into the lake and the creation of anoxic conditions in the sediments, in shaping the magnetic assemblage of Holocene sediments. Pyrrhotite is stable under reducing conditions as opposed to magnetite, which is unstable. We therefore interpret that previous pedogenic processes occurred in the then deglaciated catchment of the lake were responsible for the oxidation of pyrrhotite and authigenic formation of magnetite, which survived subsequent reductive diagenesis given its initial larger concentrations. This interpretation is supported by the magnetic properties of Quaternary till sediments, which in some cases retain their original magnetic assemblage (magnetite and pyrrhotite) and in other cases include larger concentrations of magnetite. The Holocene sequence includes some discrete layers with a magnetic signature identical to that of the glacial flour. These layers are interpreted as being deposited during extreme runoff events that eroded Quaternary tills. The sharp change in magnetic properties observed in the lake sediments between 13 and 12.4 kyr BP supports the rapid deglaciation of the catchment of Lake Sanabria inferred in previous studies on the basis of sedimentological, geochemical and geomorphological data.

Environment-Dependent Distribution of the Sediment nifH-Harboring Microbiota in the Northern South China Sea

PubMed Central

Yang, Jinying; Li, Jing; Luan, Xiwu; Zhang, Yunbo; Gu, Guizhou; Xue, Rongrong; Zong, Mingyue; Klotz, Martin G.

2013-01-01

The South China Sea (SCS), the largest marginal sea in the Western Pacific Ocean, is a huge oligotrophic water body with very limited influx of nitrogenous nutrients. This suggests that sediment microbial N2 fixation plays an important role in the production of bioavailable nitrogen. To test the molecular underpinning of this hypothesis, the diversity, abundance, biogeographical distribution, and community structure of the sediment diazotrophic microbiota were investigated at 12 sampling sites, including estuarine, coastal, offshore, deep-sea, and methane hydrate reservoirs or their prospective areas by targeting nifH and some other functional biomarker genes. Diverse and novel nifH sequences were obtained, significantly extending the evolutionary complexity of extant nifH genes. Statistical analyses indicate that sediment in situ temperature is the most significant environmental factor influencing the abundance, community structure, and spatial distribution of the sediment nifH-harboring microbial assemblages in the northern SCS (nSCS). The significantly positive correlation of the sediment pore water NH4+ concentration with the nifH gene abundance suggests that the nSCS sediment nifH-harboring microbiota is active in N2 fixation and NH4+ production. Several other environmental factors, including sediment pore water PO43− concentration, sediment organic carbon, nitrogen and phosphorus levels, etc., are also important in influencing the community structure, spatial distribution, or abundance of the nifH-harboring microbial assemblages. We also confirmed that the nifH genes encoded by archaeal diazotrophs in the ANME-2c subgroup occur exclusively in the deep-sea methane seep areas, providing for the possibility to develop ANME-2c nifH genes as a diagnostic tool for deep-sea methane hydrate reservoir discovery. PMID:23064334

Demersal fish assemblages off southern New Zealand in relation to depth and temperature

NASA Astrophysics Data System (ADS)

Jacob, W.; McClatchie, S.; Probert, P. K.; Hurst, R. J.

1998-12-01

We examined the relationship between demersal fish assemblage and depth, temperature, latitude and longitude off southern New Zealand (46-54°S and 165-180°E) in water depths of 80-787 m. Catch weight data were analysed by two-way indicator analysis (TWIA), groupaverage agglomerative clustering (UPGMA) and Detrended Correspondence Analysis (DCA). The spatial pattern of demersal fish off southern New Zealand conforms to the concept of species groups or fish assemblages related to environmental gradients. Shallow-water assemblages were dominated by species from the families Gempylidae, Squalidae, Triakidae and Moridae, mainly represented by Thyrsites atun, Squalus acanthias, Galeorhinus australis, and Pseudophycis bachus. Deep water assemblages were dominated by Chimaeridae, Argentinidae, Merlucciidae and Macrouridae, mainly represented by Hydrolagus novaezelandiae, Argentina elongata, Macruronus novaezelandiae, and Lepidorhynchus denticulatus. Total catch weight was often dominated by Merlucciidae, Macrouridae and Gempylidae. Fish assemblages were related to discrete ranges of depth (< and >300 m) and temperature (< and >9.5°C), but the range of sediment types was too narrow to show any correlation.

Habitat filtering of bacterioplankton communities above polymetallic nodule fields and sediments in the Clarion-Clipperton zone of the Pacific Ocean.

PubMed

Lindh, Markus V; Maillot, Brianne M; Smith, Craig R; Church, Matthew J

2018-04-01

Deep-sea mining of commercially valuable polymetallic nodule fields will generate a seabed sediment plume into the water column. Yet, the response of bacterioplankton communities, critical in regulating energy and matter fluxes in marine ecosystems, to such disturbances is unknown. Metacommunity theory, traditionally used in general ecology for macroorganisms, offers mechanistic understanding on the relative role of spatial differences compared with local environmental conditions (habitat filtering) for community assembly. We examined bacterioplankton metacommunities using 16S rRNA amplicons from the Clarion-Clipperton Zone (CCZ) in the eastern Pacific Ocean and in global ocean transect samples to determine sensitivity of these assemblages to environmental perturbations. Habitat filtering was the main assembly mechanism of bacterioplankton community composition in the epi- and mesopelagic waters of the CCZ and the Tara Oceans transect. Bathy- and abyssopelagic bacterioplankton assemblages were mainly assembled by undetermined metacommunity types or neutral and dispersal-driven patch-dynamics for the CCZ and the Malaspina transect. Environmental disturbances may alter the structure of upper-ocean microbial assemblages, with potentially even more substantial, yet unknown, impact on deep-sea communities. Predicting such responses in bacterioplankton assemblage dynamics can improve our understanding of microbially-mediated regulation of ecosystem services in the abyssal seabed likely to be exploited by future deep-sea mining operations. © 2018 Society for Applied Microbiology and John Wiley & Sons Ltd.

Fossil diatom assemblages as paleoecological indicators of paleo-water environmental change in the Ulleung Basin, East Sea, Republic of Korea

NASA Astrophysics Data System (ADS)

Yun, Suk Min; Lee, Taehee; Jung, Seung Won; Park, Joon Sang; Lee, Jin Hwan

2017-09-01

The fossil diatom assemblage record from two sediment cores obtained from the Ulleung Basin, East Sea, Republic of Korea, revealed changes in the diatom assemblage zones in PG1 and PD3 core samples. The two sediment cores were δC14 dated and approximately represented the late Pleistocene-Holocene. The analysis of age zones in the PG1 core and PD3 core was assessed based on the frequency of variations, and occurrences of biostratigraphical fossil diatom species. During the Last Glacial Maximum (LGM), the sea level was lower than that at present and the Ulleung Basin became isolated from the Pacific Ocean. As a result, there would have been a limited Tsushima Warm Current (TWC) influence, and salinity would have decreased resulting in increased freshwater and coastal diatoms. The distribution pattern of diatoms presented in the cores was associated with changes in water temperature and salinity and the adding of terrigenous material brought about by the input of freshwater. Changes in the abundance of a tychopelagic diatom, Paralia sulcata, reflected the effect of the water currents. Diatom temperature (Td) values and the ratio of centric/pennate diatoms provided evidence of limited influences of the TWC and freshwater inflow. It is thought that all assemblage zones were influenced by the TWC, which had an important effect on the distribution and composition of fossil diatoms.

Deep-water zooplankton in the Mediterranean Sea: Results from a continuous, synchronous sampling over different regions using sediment traps

NASA Astrophysics Data System (ADS)

Danovaro, R.; Carugati, L.; Boldrin, A.; Calafat, A.; Canals, M.; Fabres, J.; Finlay, K.; Heussner, S.; Miserocchi, S.; Sanchez-Vidal, A.

2017-08-01

Information on the dynamics of deep-sea biota is extremely scant particularly for long-term time series on deep-sea zooplankton. Here, we present the results of a deep-sea zooplankton investigation over one annual cycle based on samples from sediment trap moorings in three sub-basins along the Mediterranean Sea. Deep-sea zooplankton assemblages were dominated by copepods, as in shallow waters, only in the Adriatic Sea (>60% of total abundance), but not in the deep Ionian Sea, where ostracods represented >80%, neither in the deep Alboran Sea, where polychaetes were >70%. We found that deep-sea zooplankton assemblages: i) are subjected to changes in their abundance and structure over time, ii) are characterized by different dominant taxa in different basins, and iii) display clear taxonomic segregation between shallow and near-bottom waters. Zooplankton biodiversity decreases with increasing water depth, but the equitability increases. We suggest here that variations of zooplankton abundance and assemblage structure are likely influenced by the trophic condition characterizing the basins. Our findings provide new insights on this largely unknown component of the deep ocean, and suggest that changes in the export of organic matter from the photic zone, such as those expected as a consequence of global change, can significantly influence zooplankton assemblages in the largest biome on Earth.

Relationships between meiofaunal biodiversity and prokaryotic heterotrophic production in different tropical habitats and oceanic regions.

PubMed

Pusceddu, Antonio; Gambi, Cristina; Corinaldesi, Cinzia; Scopa, Mariaspina; Danovaro, Roberto

2014-01-01

Tropical marine ecosystems are among the most diverse of the world oceans, so that assessing the linkages between biodiversity and ecosystem functions (BEF) is a crucial step to predict consequences of biodiversity loss. Most BEF studies in marine ecosystems have been carried out on macrobenthic diversity, whereas the influence of the meiofauna on ecosystem functioning has received much less attention. We compared meiofaunal and nematode biodiversity and prokaryotic heterotrophic production across seagrass, mangrove and reef sediments in the Caribbean, Celebes and Red Seas. For all variables we report the presence of differences among habitats within the same region, and among regions within the same habitat. In all regions, the richness of meiofaunal taxa in reef and seagrass sediments is higher than in mangrove sediments. The sediments of the Celebes Sea show the highest meiofaunal biodiversity. The composition of meiofaunal assemblages varies significantly among habitats in the same region. The nematode beta diversity among habitats within the same region is higher than the beta diversity among regions. Although one site per habitat was considered in each region, these results suggest that the composition of meiofaunal assemblages varies primarily among biogeographic regions, whereas the composition of nematode assemblages varies more considerably among habitats. Meiofauna and nematode biodiversity and prokaryotic heterotrophic production, even after the removal of covariate effects linked with longitude and the quantity and nutritional quality of organic matter, are positively and linearly linked both across regions and within each habitat type. Our results confirm that meiofauna and nematode biodiversity may influence benthic prokaryotic activity, which, in turn, implies that diversity loss could have negative impacts on ecosystem functioning in these systems.

Calcification by Reef-Building Sclerobionts

PubMed Central

Mallela, Jennie

2013-01-01

It is widely accepted that deteriorating water quality associated with increased sediment stress has reduced calcification rates on coral reefs. However, there is limited information regarding the growth and development of reef building organisms, aside from the corals themselves. This study investigated encruster calcification on five fore-reefs in Tobago subjected to a range of sedimentation rates (1.2 to 15.9 mg cm−2 d−1). Experimental substrates were used to assess rates of calcification in sclerobionts (e.g. crustose coralline algae, bryozoans and barnacles) across key reef microhabitats: cryptic (low-light), exposed (open-horizontal) and vertical topographic settings. Sedimentation negatively impacted calcification by photosynthesising crustose coralline algae in exposed microhabitats and encrusting foram cover (%) in exposed and cryptic substrates. Heterotrophs were not affected by sedimentation. Fore-reef, turbid water encruster assemblages calcified at a mean rate of 757 (SD ±317) g m−2 y−1. Different microhabitats were characterised by distinct calcareous encruster assemblages with different rates of calcification. Taxa with rapid lateral growth dominated areal cover but were not responsible for the majority of CaCO3 production. Cryptobiont assemblages were composed of a suite of calcifying taxa which included sciaphilic cheilostome bryozoans and suspension feeding barnacles. These calcified at mean rates of 20.1 (SD ±27) and 4.0 (SD ±3.6) g m−2 y−1 respectively. Encruster cover (%) on exposed and vertical substrates was dominated by crustose coralline algae which calcified at rates of 105.3 (SD ±67.7) g m−2 y−1 and 56.3 (SD ±8.3) g m−2 y−1 respectively. Globally, encrusting organisms contribute significant amounts of carbonate to the reef framework. These results provide experimental evidence that calcification rates, and the importance of different encrusting organisms, vary significantly according to topography and sediment impacts. These findings also highlight the need for caution when modelling reef framework accretion and interpreting results which extrapolate information from limited data. PMID:23555864

Colonization of overlaying water by bacteria from dry river sediments.

PubMed

Fazi, Stefano; Amalfitano, Stefano; Piccini, Claudia; Zoppini, Annamaria; Puddu, Alberto; Pernthaler, Jakob

2008-10-01

We studied the diversity, community composition and activity of the primary microbial colonizers of the water above freshly re-wetted sediments from a temporary river. Dried sediments, collected from Mulargia River (Sardinia, Italy), were covered with sterile freshwater in triplicate microcosms, and changes of the planktonic microbial assemblage were monitored over a 48 h period. During the first 9 h bacterial abundance was low (1.5 x 10(4) cells ml(-1)); it increased to 3.4 x 10(6) cells ml(-1) after 28 h and did not change thereafter. Approximately 20% of bacteria exhibited DNA de novo synthesis already after 9 h of incubation. Changes of the ratios of (3)H-leucine to (3)H-thymidine incorporation rates indicated a shift of growth patterns during the experiment. Extracellular enzyme activity showed a maximum at 48 h with aminopeptidase activity (430.8 +/- 22.6 nmol MCA l(-1) h(-1)) significantly higher than alkaline phosphatase (98.6 +/- 4.3 nmol MUF l(-1) h(-1)). The primary microbial colonizers of the overlaying water - as determined by 16S rRNA gene sequence analysis - were related to at least six different phylogenetic lineages of Bacilli and to Alphaproteobacteria (Brevundimonas spp. and Caulobacter spp.). Large bacterial cells affiliated to one clade of Bacillus sp. were rare in the dried sediments, but constituted the majority of the planktonic microbial assemblage and of cells with detectable DNA-synthesis until 28 h after re-wetting. Their community contribution decreased in parallel with a rise of flagellated and ciliated protists. Estimates based on cell production rates suggested that the rapidly enriched Bacillus sp. suffered disproportionally high loss rates from selective predation, thus favouring the establishment of a more heterogenic assemblage of microbes (consisting of Proteobacteria, Actinobacteria and Cytophaga-Flavobacteria). Our results suggest that the primary microbial colonizers of the water above dried sediments are passively released into the plankton and that their high growth potential is counteracted by the activity of bacterivorous protists.

Badenian planktonic foraminifera as climate proxies at the southern margin of the Central Paratethys (Ugljevik, Bosnia and Herzegovina)

NASA Astrophysics Data System (ADS)

Theobalt, D.; Mandic, O.

2012-04-01

Badenian transgression is well exposed in the open coal pit Bogutovo Selo near Ugljevik in NE Bosnia and Herzegovina, located at the southern margin of the Pannonian Basin. Middle Miocene marine sediments superpose Late Oligocene lignite bearing lacustrine deposits. The studied succession is about 62 m thick and includes the uppermost part of the lake deposits, comprising clays, sands and coal seams, followed by marine sediments. These consist mainly of gray marls, which show some intercalations of thin, dark clay layers, volcanic ash layers and fossiliferous beds as well as carbonate bodies of different thicknesses. The presence of Orbulina suturalis allows a biostratigraphic correlation of the marine transgression horizon with the upper part of the Lower Badenian. 28 planktonic foraminiferal assemblages were investigated using quantitative analysis to evaluate the climate development during the initial marine flooding by the Paratethys Sea. Further on the samples were statistically treated to find out if there are significant differences in assemblages from the marine sediments deposited before and after the initial Serravallian cooling event coinciding with the onset of the Middle Badenian (Wielician) Salinity Crisis. 17 planktonic foraminiferal species were grouped by their palaeoclimatic significance into cool (Globigerina bulloides, G. praebulloides, G. diplostoma, G. concinna, G. tarchanensis, G. falconensis, Turborotalita quinqueloba), temperate (Globorotalia bykovae, G. transsylvanica, G. peripheroronda, Globoturborotalita woodi), warm-temperate (Globigerinella regularis, Tenuitellinata angustiumbilicata) and warm indicators (Globigerinoides trilobus, G. quadrilobatus, Orbulina suturalis, Globoquadrina cf. altispira). The counts were performed mainly on generic level. Upper Lower Badenian (Upper Lagenidae Zone) is represented in the marly succession in the lower part of the section, where the foraminiferal assemblages indicate warmer conditions with high percentages of warm water indicators. A distinct cooling is shown in the uppermost passage of the lower part, which is followed by a 13 m thick carbonate platform of Wielician age. This transition corresponds to the gradual shift from Greenhouse into Icehouse climate after the late Middle Miocene Climatic Optimum. The superposing marly deposits of the late Wielician age (Earliest Serravallian) contain planktonic foraminiferal assemblages that indicate cooler conditions. The general percentage of cool water indicators is much higher than in the lower Badenian sediments.

Foraminifer- and diatom-based paleoceanographic study of Holocene sediments from the Sabrina Coast, East Antarctica

NASA Astrophysics Data System (ADS)

Vadman, K. J.; Shevenell, A.; Leventer, A.; Domack, E. W.; Huber, B. A.; Orsi, A. H.; Gulick, S. P. S.

2015-12-01

Cruise NBP14-02 conducted the first interdisciplinary oceanographic survey of the continental shelf adjacent to the Totten Glacier-Moscow University Ice Shelf system on the Sabrina Coast, East Antarctica. Hydrographic data indicate that this system is presently influenced by subsurface (>350 m) intrusion of relatively warm (>0°C) modified Circumpolar Deep Water (mCDW) via a cross-shelf trough. To assess the late Quaternary influence of mCDW, we collected marine sediment cores at two locations, each of which recovered a complete 10-13 m sequence of glacial diamict and Holocene laminated diatom ooze/mud. Chronology is constrained by 210Pb and species-specific foraminifer-based AMS 14C dates. Foraminifer CaCO3 is most abundant in surface sediments (0-0.2 mcd) and from 1.5 to 5 mcd. Planktic foraminifer, Neogloboquadrina pachyderma(s), dominates surface sediments and diatom muds downcore, but is less abundant in diatom oozes. Benthic foraminifer species, Bulimina aculeata, which prefers hemipelagic environments and bottom waters >0°C, dominates the living benthic assemblage. The fossil benthic assemblage is characterized by Trifarina angulosa, associated with oxygenated bottom waters and strong bottom currents, suggesting that this assemblage may record past changes in the shoreward flow of ocean currents and the location of oceanic frontal zones. T. angulosa presence in oozes of mat-forming diatom species associated with oceanic fronts, supports this interpretation. Modern benthic and planktic δ18O suggest a well-mixed water column. Below 1.5 mcd, foraminifer isotopes and diatom assemblages indicate surface stratification and increased biogenic productivity, suggesting that modern environmental conditions, including mCDW inflow, existed episodically during the Holocene. Paired T. angulosa δ18O and Mg/Ca analyses will provide additional information on past mCDW influence on this climatically sensitive region at the outlet of the extensive (287,000 km2) Aurora Subglacial Basin, which holds a 2-4.5 km thick volume of ice equivalent to >5 m of eustatic sea level rise.

Fossil Chironomidae (Insecta: Diptera) as Paleothermometers in the African Tropics

NASA Astrophysics Data System (ADS)

Eggermont, H.; Heiri, O.; Russell, J.; Vuille, M.; Audenaert, L.; Klaassen, G.; Verschuren, D.

2008-12-01

Reconstruction of Africa's temperature history from natural climate archives such as lake sediments is essential to amend the current scarcity of information on natural tropical climate and ecosystem variability. Chironomids are well-established paleothermometers in north-temperate/boreal regions, but their potential in tropical lakes has never before been assessed. We surveyed sub-fossil chironomid assemblages in surface sediments from 65 lakes and permanent pools in southwestern Uganda and central/southern Kenya, spanning elevations between 489 and 4575 m asl. Using various subsets of lakes and corresponding Surface-Water Temperatures (SWTemp) and Mean Annual Air Temperatures (MATemp), we developed a series of inference models for quantitative paleotemperature reconstruction. Models using both low-, mid- and high-elevation sites suffer to some extent from the small number of samples between 2500 and 3500 m asl, and from the presence of ecologically distinct but morphologically indistinguishable taxa. Models confined to mountain sites produce poorer error statistics, but are less prone to the biogeographical and taxonomic complexities associated with long climatic gradients. Overall, error statistics compare favourably with those of inference models developed for temperate regions, indicating that fossil assemblages of African Chironomidae can be valuable indicators of past temperature change. We subsequently used these models to evaluate whether high-elevation lakes in the Rwenzori Mountains (>3000 m asl) have been impacted by climate warming in recent centuries by comparing temperatures inferred from chironomid assemblages in modern sediments with those derived from chironomid assemblages in sediments deposited within or briefly after the Little Ice Age (1270-1850 AD). Depending on the model used, between 44 and 63% of the 16 lakes studied indicate significantly warmer temperatures in recent times (corresponding with an average MATemp rise of 0.88 ° C, and average SWTemp rise of 1.33 ° C), while all but one of the other lakes show temperature changes that are statistically insignificant. We conclude that chironomid communities in Rwenzori lakes adequately record past temperature changes, with potential for evaluating the impacts of past air temperature variation on the long-term dynamics of the Rwenzori glaciers.

Response of diatoms and silicoflagellates to climate change in the Santa Barbara Basin during the past 250 years and the rise of the toxic diatom Pseudo-nitzschia australis

USGS Publications Warehouse

Barron, John A.; Bukry, David; Field, David B.; Finney, Bruce

2013-01-01

Diatoms and silicoflagellate assemblages were examined in two year-increments of varved samples spanning the interval from 1748 through 2007 in Santa Barbara Basin (SBB) box core SBBC0806 to determine the timing and impact of possible 20th century warming on several different components of the plankton. Diatoms (Thalassionema nitzschioides =TN) and silicoflagellates (Distephanus speculum s.l. =DS) indicative of cooler waters and a shallow thermocline begin to decline in the 1920s and persistently compose a lower percentage of the assemblage in the SBB by about 1940. Prior to 1940, TN constituted on average ~30% of the Chaetoceros-free diatom sediment assemblage and DS on average ~36% of the silicoflagellate assemblage. Between 1940 and 1996 these relative abundances were ~20% (TN) and ~8% (DS). These results are consistent with results from planktonic foraminifera and radiolarians that indicate an influence of 20th century warming on marine ecosystems before most scientific observations began. Cooling of surface waters coincident with the one of the strongest La Niña events of the 20th century (and a return to negative PDO conditions) in late 1998 brought about a return to pre-1940 values of these cool water taxa (TN ~31%, DS ~25%). However, this recent regional cooling appears to have been accompanied by profound changes in the diatom assemblage. Pseudo-nitzschia australis, and Pseudo-nitzschia multiseries, diatom species associated with domoic acid, a neurotoxin that causes shellfish poisoning and marine mammal deaths, rapidly became dominant in the SBB sediment record at the time of the regional cooling (1999) and increased substantially in numbers as a bloom-forming taxon (relative to Chaetoceros spores) in 2003. Prior to 2003 diatom blooms recorded in the SBB sediment record consisted predominantly of Chaetoceros spores and less commonly of Rhizosolenia-related species (Neocalyptrella robusta and R. setigera). Fecal pellets dominated by valves of P. australis, however, were particularly abundant in both the 2003 and 2006 samples, coincident with recorded incidents of domoic acid increase and widespread shellfish poisoning in the SBB.

Late Quaternary changes in intermediate water oxygenation and oxygen minimum zone, northern Japan: A benthic foraminiferal perspective

NASA Astrophysics Data System (ADS)

Shibahara, Akihiko; Ohkushi, Ken'ichi; Kennett, James P.; Ikehara, Ken

2007-09-01

A strong oxygen minimum zone (OMZ) currently exists at upper intermediate water depths on the northern Japanese margin, NW Pacific. The OMZ results largely from a combination of high surface water productivity and poor ventilation of upper intermediate waters. We investigated late Quaternary history (last 34 kyr) of ocean floor oxygenation and the OMZ using quantitative changes in benthic foraminiferal assemblages in three sediment cores taken from the continental slope off Shimokita Peninsula and Tokachi, northern Japan, at water depths between 975 and 1363 m. These cores are well located within the present-day OMZ, a region of high surface water productivity, and in close proximity to the source region of North Pacific Intermediate Water. Late Quaternary benthic foraminiferal assemblages experienced major changes in response to changes in dissolved oxygen concentration in ocean floor sediments. Foraminiferal assemblages are interpreted to represent three main groups representing oxic, suboxic, and dysoxic conditions. Assemblage changes in all three cores and hence in bottom water oxygenation coincided with late Quaternary climatic episodes, similar to that known for the southern California margin. These episodes, in turn, are correlated with orbital and millennial climate episodes in the Greenland ice core including the last glacial episode, Bølling-Ållerød (B/A), Younger Dryas, Preboreal (earliest Holocene), early Holocene, and late Holocene. The lowest oxygen conditions, marked by dysoxic taxa and laminated sediments in one core, occurred during the B/A and the Preboreal intervals. Suboxic taxa dominated mainly during the last glacial, the Younger Dryas, and most of the Holocene. Dysoxic conditions during the B/A and Preboreal intervals in this region were possibly caused by high surface water productivity at times of reduced intermediate ventilation in the northwestern Pacific. Remarkable similarities are evident in the late Quaternary sequence of benthic foraminiferal assemblage change between the two very distant continental margins of northern Japan and southern California. The oscillations in OMZ strength, reflected by these faunal changes, were widespread and apparently synchronous over wide areas of the North Pacific, reflecting broad changes in intermediate water ventilation and surface ocean productivity closely linked with late Quaternary climate change on millennial and orbital timescales.

Abundance and physiology of dominant soft corals linked to water quality in Jakarta Bay, Indonesia

PubMed Central

Januar, Indra; Wild, Christian; Kunzmann, Andreas

2016-01-01

Declining water quality is one of the main reasons of coral reef degradation in the Thousand Islands off the megacity Jakarta, Indonesia. Shifts in benthic community composition to higher soft coral abundances have been reported for many degraded reefs throughout the Indo-Pacific. However, it is not clear to what extent soft coral abundance and physiology are influenced by water quality. In this study, live benthic cover and water quality (i.e. dissolved inorganic nutrients (DIN), turbidity (NTU), and sedimentation) were assessed at three sites (< 20 km north of Jakarta) in Jakarta Bay (JB) and five sites along the outer Thousand Islands (20–60 km north of Jakarta). This was supplemented by measurements of photosynthetic yield and, for the first time, respiratory electron transport system (ETS) activity of two dominant soft coral genera, Sarcophyton spp. and Nephthea spp. Findings revealed highly eutrophic water conditions in JB compared to the outer Thousand Islands, with 44% higher DIN load (7.65 μM/L), 67% higher NTU (1.49 NTU) and 47% higher sedimentation rate (30.4 g m−2 d−1). Soft corals were the dominant type of coral cover within the bay (2.4% hard and 12.8% soft coral cover) compared to the outer Thousand Islands (28.3% hard and 6.9% soft coral cover). Soft coral abundances, photosynthetic yield, and ETS activity were highly correlated with key water quality parameters, particularly DIN and sedimentation rates. The findings suggest water quality controls the relative abundance and physiology of dominant soft corals in JB and may thus contribute to phase shifts from hard to soft coral dominance, highlighting the need to better manage water quality in order to prevent or reverse phase shifts. PMID:27904802

Heavy minerals in the 2011 Tohoku-oki tsunami deposits—insights into sediment sources and hydrodynamics

NASA Astrophysics Data System (ADS)

Jagodziński, Robert; Sternal, Beata; Szczuciński, Witold; Chagué-Goff, Catherine; Sugawara, Daisuke

2012-12-01

The 2011 Tohoku-oki tsunami left sand and mud deposits more than 4 km inland on the coastal plain of Sendai, Japan. The tsunami deposits, pre-tsunami soils and beach sediments were analysed for grain size, and heavy mineral content and assemblages to test the applicability of heavy mineral analyses in the identification of tsunami deposits and interpretation of associated sedimentation processes. Heavy minerals comprised on average 35% of the tsunami deposit in the 0.125-0.25 mm grain size fraction. The most common were orthopyroxenes, clinopyroxenes, amphiboles, limonites and opaque minerals. Heavy mineral concentrations and assemblages were similar in the tsunami deposits, beach and pre-tsunami soils and sediments and thus tsunami deposits could not simply be identified based on their heavy minerals. Sediment provenance analysis revealed that tsunami deposits left within 1.5 km of the shoreline were mostly eroded from the beach, dune and local soils, while deposits farther inland (> 1.5 km) were mostly derived from local soil erosion. No evidence was found for a significant contribution of offshore sediments. Detailed analyses revealed that the lowermost portion of tsunami deposits was mostly of local origin, while the sediment source of the upper portion was variable. A comparison with a previous study of heavy minerals in 2004 IOT deposits confirms that heavy minerals in tsunami deposits are mostly source-dependent and may represent a useful supplementary tool in studies of tsunami deposits. However, the interpretation must always be placed in the local geological context and corroborated with other "tsunami proxies".

Ichnology of an upper carboniferous fluvio-estuarine paleovalley: The tonganoxie sandstone, buildex quarry, eastern Kansas, USA

USGS Publications Warehouse

Buatois, L.A.; Mangano, M.G.; Maples, C.G.; Lanier, Wendy E.

1998-01-01

Tidal rhythmites of the Tonganoxie Sandstone Member (Stranger Formation, Douglas Group) at Buildex Quarry, eastern Kansas, contain a relatively diverse ichnofauna. The assemblage includes arthropod locomotion (Dendroidichnites irregulare, Diplichnites gouldi type A and B, Diplopodichnus biformis, Kouphichnium isp., Mirandaichnium famatinense, and Stiaria intermedia), resting (Tonganoxichnus buildexensis) and feeding traces (Stiallia pilosa, Tonganoxichnus ottawensis); grazing traces (Gordia indianaensis, Helminthoidichnites tenuis, Helminthopsis hieroglyphica); feeding structures (Circulichnis montanus, Treptichnus bifurcus, Treptichnus pollardi, irregular networks), fish traces (Undichna britannica, Undichna simplicitas), tetrapod trackways, and root traces. The taxonomy of some of these ichnotaxa is briefly reviewed and emended diagnoses for Gordia indianaensis and Helminthoidichnites tenuis are proposed. Additionally, the combined name Dendroidichnites irregulare is proposed for nested chevron trackways. Traces previously regarded as produced by isopods are reinterpreted as myriapod trackways (D. gouldi type B). Trackways formerly interpreted as limulid crawling and swimming traces are assigned herein to Kouphichnium isp and Dendroidichnites irregulare, respectively. Taphonomic analysis suggests that most grazing and feeding traces were formed before the arthropod trackways and resting traces. Grazing/feeding traces were formed in a soft, probably submerged substrate. Conversely, the majority of trackways and resting traces probably were produced subaerially in a firmer, dewatered and desiccated sediment. The Buildex Quarry ichnofauna records the activity of a terrestrial and freshwater biota. The presence of this assemblage in tidal rhythmites is consistent with deposition on tidal flats in the most proximal zone of the inner estuary, between the maximum landward limit of tidal currents and the salinity limit further towards the sea.

A Study on Benthic Foraminifera Assemblages in the Upper Slope off Southwest Taiwan

NASA Astrophysics Data System (ADS)

Yeh, Jen-Chu; Lin, Andrew T.; Chien, Chih-Wei

2016-04-01

This study attempts to establish the spatial distribution of benthic foraminifera in the upper accretionary wedge off SW Taiwan. A few box cores (each core up to 49 cm thick) are retrieved onboard R/V Ocean Researcher I during 1092 cruise in 2014 at water depths ranging from 1,135 to 1,586 m lying in between the Good Weather Ridge and the Yuan-An Ridge. Analyses on grain size reveal that the sediment size ranges from clay to silt for all sites with the exception of YT1 site, where a small percentage of fine sand (< 20%) is found to distribute evenly in a 32 cm-thick box core. Core images from X-radiographs show some layers of foraminifera ooze and rare traces of bioturbation. Age of sedimentation is obtained by using 210Pb dating method. The 210Pb concentration profile decays exponentially down core, indicating sedimentation from suspension. The measured sedimentation rate ranges from 0.47 to 2.4 mm/yr. Site YT1 has the lowest sedimentation rate (around 0.47 mm/yr), leading to high abundance of individual benthic foraminiferal species. Living foraminiferal individuals were distinguished from dead assemblages by Rose Bengal staining method during the cruise. Our results show that the dominant living species of all studied cores is Chilostomella oolina, with subsidiary occurrences of Bulimina aculeata, Bolivinita quadrilateral, and Lenticulina spp. etc. Cluster analysis suggests that the forams have similar spatial distribution pattern at all studied sites, indicating uniform and stable hemipelagic sedimentation. Analyses of dead assemblages reveal a remarkable decrease in the abundance of Bulimina and Uvigerina for the last 100 years at YT-2 site, with increasing abundance of Chilostomella. This indicates that the water masses may have turned from suboxic to dysoxic conditions since c. 100 year ago. This is the first study to report the living benthic foraminifera distribution in water depths up to c. 1,600 m off SW Taiwan, providing a basis for future studies. Keywords: benthic foraminifera, upper slope, Taiwan

Succession of Hydrocarbon Degradation and Microbial Diversity during a Simulated Petroleum Seepage in Caspian Sea Sediments

NASA Astrophysics Data System (ADS)

Mishra, S.; Stagars, M.; Wefers, P.; Schmidt, M.; Knittel, K.; Krueger, M.; Leifer, I.; Treude, T.

2016-02-01

Microbial degradation of petroleum was investigated in intact sediment cores of Caspian Sea during a simulated petroleum seepage using a sediment-oil-flow-through (SOFT) system. Over the course of the SOFT experiment (190 days), distinct redox zones established and evolved in the sediment core. Methanogenesis and sulfate reduction were identified to be important processes in the anaerobic degradation of hydrocarbons. C1 to C6 n-alkanes were completely exhausted in the sulfate-reducing zone and some higher alkanes decreased during the upward migration of petroleum. A diversity of sulfate-reducing bacteria was identified by 16s rRNA phylogenetic studies, some of which are associated with marine seeps and petroleum degradation. The δ13C signal of produced methane decreased from -33.7‰ to -49.5‰ indicating crude oil degradation by methanogenesis, which was supported by enrichment culturing of methanogens with petroleum hydrocarbons and presence of methanogenic archaea. The SOFT system is, to the best of our knowledge, the first system that simulates an oil-seep like condition and enables live monitoring of biogeochemical changes within a sediment core during petroleum seepage. During our presentation we will compare the Caspian Sea data with other sediments we studied using the SOFT system from sites such as Santa Barbara (Pacific Ocean), the North Alex Mud Volcano (Mediterranean Sea) and the Eckernfoerde Bay (Baltic Sea). This research was funded by the Deutsche Forschungsgemeinschaft (SPP 1319) and DEA Deutsche Erdoel AG. Further support came from the Helmholtz and Max Planck Gesellschaft.

Reduced Diversity and High Sponge Abundance on a Sedimented Indo-Pacific Reef System: Implications for Future Changes in Environmental Quality

PubMed Central

Powell, Abigail; Smith, David J.; Hepburn, Leanne J.; Jones, Timothy; Berman, Jade; Jompa, Jamaluddin; Bell, James J.

2014-01-01

Although coral reef health across the globe is declining as a result of anthropogenic impacts, relatively little is known of how environmental variability influences reef organisms other than corals and fish. Sponges are an important component of coral reef fauna that perform many important functional roles and changes in their abundance and diversity as a result of environmental change has the potential to affect overall reef ecosystem functioning. In this study, we examined patterns of sponge biodiversity and abundance across a range of environments to assess the potential key drivers of differences in benthic community structure. We found that sponge assemblages were significantly different across the study sites, but were dominated by one species Lamellodysidea herbacea (42% of all sponges patches recorded) and that the differential rate of sediment deposition was the most important variable driving differences in abundance patterns. Lamellodysidea herbacea abundance was positively associated with sedimentation rates, while total sponge abundance excluding Lamellodysidea herbacea was negatively associated with rates of sedimentation. Overall variation in sponge assemblage composition was correlated with a number of variables although each variable explained only a small amount of the overall variation. Although sponge abundance remained similar across environments, diversity was negatively affected by sedimentation, with the most sedimented sites being dominated by a single sponge species. Our study shows how some sponge species are able to tolerate high levels of sediment and that any transition of coral reefs to more sedimented states may result in a shift to a low diversity sponge dominated system, which is likely to have subsequent effects on ecosystem functioning. PMID:24475041

The Middle Miocene of the Fore-Carpathian Basin (Poland, Ukraine and Moldova)

NASA Astrophysics Data System (ADS)

Wysocka, Anna; Radwański, Andrzej; Górka, Marcin; Bąbel, Maciej; Radwańska, Urszula; Złotnik, Michał

2016-09-01

Studies of Miocene sediments in the Fore-Carpathian Basin, conducted by geologists from the University of Warsaw have provided new insights on the distribution of the facies infilling the basin, particularly in the forebulge and back-bulge zones. The origin of the large-scale sand bodies, evaporitic deposits and large-scale organic buildups is discussed, described and verified. These deposits originated in variable, shallow marine settings, differing in their water chemistry and the dynamics of sedimentary processes, and are unique with regard to the fossil assemblages they yield. Many years of taxonomic, biostratigraphic, palaeoecologic and ecotaphonomic investigations have resulted in the identification of the fossil assemblages of these sediments, their age, sedimentary settings and post-mortem conditions. Detailed studies were focused on corals, polychaetes, most classes of molluscs, crustaceans, echinoderms, and fishes.

Soft-sediment deformation in New Zealand: Structures resulting from the 2010/11 Christchurch earthquakes and comparison with Pleistocene sediments of the Taupo Volcanic Zone (TVZ)

NASA Astrophysics Data System (ADS)

Scholz, C.; Downs, D. T.; Gravley, D.; Quigley, M.; Rowland, J. V.

2011-12-01

The distinction between seismites and other event-related soft-sediment deformation is a challenging problem. Recognition and interpretation is aided by comparison of recent examples produced during known seismic events and those generated experimentally. Seismites are important features, once recognized in a rock, for interpretations of paleotectonic environment, tectonic relationships of sediments in basins, sedimentary facies analysis, evaluation of earthquake frequency and hazard and consequent land managment. Two examples of soft-sediment deformation, potentially generated through ground shaking and associated liquefaction, are described from within the TVZ: 1) Near Matata on the western margin of the Whakatane Graben. This location has a complicated en-echelon fault history and large earthquakes occur from time to time (e.g., 1987 ML6.3 Edgecumbe event). The structures occur in ~550 ka volcanic sediments, and represent soft-sediment deformation within stratigraphically-bounded layers. Based on paleoenvironment, appearance, and diagnostic criteria described by other authors (Sims 1975; Hempton and Dewey 1983), we interpret these features to have formed by ground shaking related to an earthquake and/or possibly accompanying large volcanic eruptions, rather than by slope failure. 2) Near Taupo, 3 km from the active Kaiapo fault. Lakeward dipping, nearly horizontal lacustrine sediments overlay Taupo Ignimbrite (1.8 ka). At one outcrop the lake beds have subsided into the underlying substrate resulting in kidney-shaped features. These structures formed as a result of liquefaction of the underlying substrate, which may have been caused by ground shaking related to either seismic or volcanic activity. However, inferred time relationships are more consistent with seismic-induced ground shaking. We compare and contrast the form and geometry of the above structures with seismites generated during the recent Christchurch earthquakes (Sep. 2010 and Feb. 2011). Hempton, M. R. and J. F. Dewey (1983). "Earthquake-induced deformational structures in young lacustrine sediments, East Anatolian Fault, southeast Turkey." Tectonophysics 98(3-4): T7-T14. Sims, J. D. (1975). "Determining earthquake recurrence intervals from deformational structures in young lacustrine sediments." Tectonophysics 29(1-4): 141-152.

Preliminary study on the L ate Cretaceous ostracods from continental scientific drilling SK1 in the Songliao Basin, NE China

NASA Astrophysics Data System (ADS)

Xi, Dangpeng; Qu, Haiying; Shi, Zhongye; Wan, Xiaoqiao

2017-04-01

Songliao Basin is one of the biggest lacustrine systems in Asia during Cretaceous age. Widespread deposits in the basin are mainly composed of clastic sediments which contain abundant fossils including gastropod, bivalves, ostracods, vertebrates and others. These well preserved ostracod fossils provide us valuable information about past climate changes and biotic responses in a greenhouse environment.The Cretaceous Continental Scientific Drilling in the Songliao Basin (SK1) offers a rare opportunity to study Late Cretaceous non-marine ostracod. The SK1 was drilled separately in two boreholes: the lower 959.55-meter-thick south core (SK1(s)), and the upper 1636.72-meter-thick north core (SK1 (n)), containing the Upper Quantou, Qingshankou, Yaojia, Nenjiang Formation, Sifangtai, Mingshui and lower Taikang formations. Here we establish high-resolution non-marine ostracod biostratigraphy based on SK1. 80 species belonging to 12 genera in the SK1(S) and 45 species assigned to 20 genera in the SK1(n) have been recovered. Nineteen ostracod assemblage zones have been recognized: 1. Mongolocypris longicaudata-Cypridea Assemblage Zone, 2.Triangulicypris torsuosus-Triangulicypris torsuosus. nota Assemblage Zone, 3. Cypridea dekhoinensis-Cypridea gibbosa Assemblage Zone, 4.Cypridea nota-Sunliavia tumida Assemblage Zone, 5.Cypridea edentula-Lycopterocypris grandis Assemblage Zone, 6.Cypridea fuyuensis-Triangulicypris symmetrica Assemblage Zone, 7.Triangulicypris vestilus-Triangulicypris fusiformis-Triangulicypris pumilis Assemblage Zone, 8.Cypridea panda-Mongolocypris obscura Assemblage Zone, 9. Cypridea exornata-Cypridea dongfangensis Assemblage Zone, 10.Cypridea favosa-Mongolocypris tabulata Assemblage Zone, 11.Cypridea formosa-Cypridea sunghuajiangensis Assemblage Zone, 12. Cypridea anonyma-Candona fabiforma Assemblage Zone, 13.Cypridea gracila-Cypridea gunsulinensis Assemblage Zone, 14.Mongolocypris magna-Mongolocypris heiluntszianensis Assemblage Zone, 15.Cypridea liaukhenensis-Cypridea stellata Assemblage Zone, 16. Ilyocyprimorpha-Limnocypridea sunliaonensis-Periacanthella Assemblage Zone, 17. Strumosia inandita Asemblage-Zone, 18.Talicypridea amoena-Metacypris kaitunensis-Ziziphocypris simakovi Assemblage Zone, 19.Ilyocypris Assemblage Zone. Assemblage Zone 1 to 18 are belong to late Cretaceous, but 19 might constrained to the Latest Maastrichtian to the Earliset Danian.

Influence of Late Quaternary depositional environments on the structure of nannofossil assemblages in the Titanic area (northwestern Atlantic)

NASA Astrophysics Data System (ADS)

Dmitrenko, O. B.

2012-02-01

The nannofosssil assemblages have been analyzed in five cores taken from the Titanic area of the northwestern Atlantic (˜41°-42° N, ˜47°-50° W, water depths >3500 m) during cruises 41 and 43 of the R/V Akademik Mstislav Keldysh in 1998 and 2000. They correlate the host sediments with the upper Pleistocene-Holocene Emiliania huxleyi zone. The changes in the structure of the nannofossil assemblages and the lithological characteristics such as the content of biogenic CaCO3, the abundance of ice-rafted debris, and the grain-size composition were used for the high-resolution stratigraphy of sections with defining marine isotopic stages 1-3 of the last 24 kyr. A characteristic feature of the nannofossil assemblages from this area is their enrichment with the cold-resistant species Coccolthus pelagicus during the warm climatic stages and the lack of allochthonous coccolitophorid remains.

The Pipe Creek Sinkhole biota, a diverse late tertiary continental fossil assemblage from Grant County, Indiana

USGS Publications Warehouse

Farlow, J.O.; Sunderman, J.A.; Havens, J.J.; Swinehart, A.L.; Holman, J.A.; Richards, R.L.; Miller, N.G.; Martin, R.A.; Hunt, R.M.; Storrs, G.W.; Curry, B. Brandon; Fluegeman, R.H.; Dawson, M.; Flint, M.E.T.

2001-01-01

Quarrying in east-central Indiana has uncovered richly fossiliferous unconsolidated sediment buried beneath Pleistocene glacial till. The fossiliferous layer is part of a sedimentary deposit that accumulated in a sinkhole developed in the limestone flank beds of a Paleozoic reef. Plant and animal (mostly vertebrate) remains are abundant in the fossil assemblage. Plants are represented by a diversity of terrestrial and wetland forms, all of extant species. The vertebrate assemblage (here designated the Pipe Creek Sinkhole local fauna) is dominated by frogs and pond turtles, but fishes, birds; snakes and small and large mammals are also present; both extinct and extant taxa are represented. The mammalian assemblage indicates an early Pliocene age (latest Hemphillian or earliest Blancan North American Land Mammal Age). This is the first Tertiary continental biota discovered in the interior of the eastern half of North America.

Macrobenthos community structure and trophic relationships within active and inactive Pacific hydrothermal sediments

NASA Astrophysics Data System (ADS)

Levin, Lisa A.; Mendoza, Guillermo F.; Konotchick, Talina; Lee, Raymond

2009-09-01

Hydrothermal fluids passing through sediments create a habitat hypothesized to influence the community structure of infaunal macrobenthos. Here we characterize the density, biomass, species composition, diversity, distributions, lifestyle, and nutritional sources of macroinfauna in hydrothermal sediments in NE and SW Pacific settings, and draw comparisons in search of faunal attributes characteristic of this habitat. There is increasing likelihood that seafloor massive sulfide deposits, associated with active and inactive hydrothermal venting, will be mined commercially. This creates a growing imperative for a more thorough understanding of the structure, dynamics, and resilience of the associated sediment faunas, and has stimulated the research presented here. Macrobenthic assemblages were studied at Manus Basin (1430-1634 m, Papua New Guinea [PNG]) as a function of location (South Su vs. Solwara 1), and hydrothermal activity (active vs. inactive), and at Middle Valley (2406-2411 m, near Juan de Fuca Ridge) as a function of habitat (active clam bed, microbial mat, hot mud, inactive background sediment). The studies conducted in PNG formed part of the environmental impact assessment work for the Solwara 1 Project of Nautilus Minerals Niugini Limited. We hypothesized that hydrothermally active sites should support (a) higher densities and biomass, (b) greater dominance and lower diversity, (c) a higher fraction of deposit feeders, and (d) greater isotopic evidence for chemosynthetic food sources than inactive sites. Manus Basin macrofauna generally had low density (<1000 ind. m -2) and low biomass (0.1-1.07 g m -2), except for the South Su active site, which had higher density (3494 ind. m -2) and biomass (11.94 g m -2), greater dominance (R1D=76%), lower diversity and more spatial (between-core) homogeneity than the Solwara 1 and South Su inactive sites. Dominant taxa at Manus Basin were Spionidae ( Prionospio sp.) in active sediments, and tanaids and deposit-feeding nuculanoid bivalves in active and inactive sediments. At Middle Valley, hot mud sediments supported few animals (1011 ind m -2) and low biomass (1.34 g m -2), while active clam bed sediments supported a high-density (19,984 ind m -2), high-biomass (4.46 g m -2), low-diversity assemblage comprised of largely orbiniid and syllid polychaetes. Microbial mat sediments had the most diverse assemblage (mainly orbiniid, syllid, dorvilleid, and ampharetid polychaetes) with intermediate densities (8191 ind m -2) and high biomass (4.23 g m -2). Fauna at both Manus Basin active sites had heavy δ 13C signatures (-17‰ to -13‰) indicative of chemosynthetic, TCA-cycle microbes at the base of the food chain. In contrast, photosynthesis and sulfide oxidation appear to fuel most of the fauna at Manus Basin inactive sites (δ 13C=-29‰ to -20‰) and Middle Valley active clam beds and microbial mats (δ 13C=-36‰ to -20‰). The two hydrothermal regions, located at opposite ends of the Pacific Ocean, supported different habitats, sharing few taxa at the generic or family level, but both exhibited elevated infaunal density and high dominance at selected sites. Subsurface-deposit feeding and bacterivory were prevalent feeding modes. Both the Manus Basin and Middle Valley assemblages exhibit significant within-region heterogeneity, apparently conferred by variations in hydrothermal activity and associated biogenic habitats.

New data on stratigraphy (palynomorphs, ostracods, paleomagnetism) of Cenozoic continental deposits of the Ishim plain, Western Siberia

NASA Astrophysics Data System (ADS)

Kuzmina, O. B.; Gnibidenko, Z. N.; Khazin, L. B.; Khazina, I. V.

2017-05-01

New micropaleontological and paleomagnetic data were obtained by studying core samples of Cenozoic continental deposits from two boreholes drilled in the south of Tyumen oblast (Western Siberia). Palynological assemblages in deposits of the Tavda (upper part), Novomikhailovka, Turtas, Abrosimovka, Tobolsk, Smirnovka, and Suzgun formations were described. Deposits of these formations are enriched in spore-pollen assemblages, which can be correlated with assemblages of regional palynozones of the West Siberian Plain. Ostracods were described in Quaternary deposits. On the basis of biostratigraphic and paleomagnetic data, the Late Eocene (Priabonian)-Holocene age of deposits was substantiated. For the first time, beds with dinocysts of genus Pseudokomewuia were identified in deposits of the Turtas Formation (Upper Oligocene) of the Ishim lithofacial area. In total, nine regional magnetozones were distinguished in the paleomagnetic section. On the basis of palynological and paleomagnetic data, sections of two boreholes were correlated, and hiatuses in sedimentation were revealed. A large hiatus is at the Eocene-Oligocene boundary (Western Siberia): the Lower Oligocene Atlym Horizon and Miocene-Pliocene and Eopleistocene sediments are missing. The Oligocene interval of the section is represented in a reduced volume.

A 600-ka Arctic sea-ice record from Mendeleev Ridge based on ostracodes

USGS Publications Warehouse

Cronin, Thomas M.; Polyak, L.V.; Reed, D.; Kandiano, E. S.; Marzen, R. E.; Council, E. A.

2013-01-01

Arctic paleoceanography and sea-ice history were reconstructed from epipelagic and benthic ostracodes from a sediment core (HLY0503-06JPC, 800 m water depth) located on the Mendeleev Ridge, Western Arctic Ocean. The calcareous microfaunal record (ostracodes and foraminifers) covers several glacial/interglacial cycles back to estimated Marine Isotope Stage 13 (MIS 13, ∼500 ka) with an average sedimentation rate of ∼0.5 cm/ka for most of the stratigraphy (MIS 5–13). Results based on ostracode assemblages and an unusual planktic foraminiferal assemblage in MIS 11 dominated by a temperate-water species Turborotalita egelida show that extreme interglacial warmth, high surface ocean productivity, and possibly open ocean convection characterized MIS 11 and MIS 13 (∼400 and 500 ka, respectively). A major shift in western Arctic Ocean environments toward perennial sea ice occurred after MIS 11 based on the distribution of an ice-dwelling ostracode Acetabulastoma arcticum. Spectral analyses of the ostracode assemblages indicate sea ice and mid-depth ocean circulation in western Arctic Ocean varied primarily at precessional (∼22 ka) and obliquity (∼40 ka) frequencies.

Late Glacial-Holocene ecostratigraphy of the south-eastern Aegean Sea, based on plankton and pollen assemblages

NASA Astrophysics Data System (ADS)

Triantaphyllou, M. V.; Antonarakou, A.; Kouli, K.; Dimiza, M.; Kontakiotis, G.; Papanikolaou, M. D.; Ziveri, P.; Mortyn, P. G.; Lianou, V.; Lykousis, V.; Dermitzakis, M. D.

2009-08-01

Quantitative analyses of coccolithophores, planktonic foraminifers, dinoflagellate cysts and pollen assemblages were carried out on shallow (NS-14) and deeper (NS-40) sediment cores from the south-eastern Aegean Sea. Nine coccolithophore (ACE 1-9) and nine planktonic foraminifer (APFE 1-9) ecozones, correlated with dinoflagellate cyst evidence, have been defined for the last ~14.5 cal. ka. Additionally, eight pollen assemblage zones (PAZ 1-8) have been recognised and correlated with the plankton ecozones. Although generally consistent with existing schemes for the central and eastern Mediterranean, the established high-resolution ecostratigraphy has led to an expanded palaeoecological reconstruction of the Late Glacial-Holocene archive in the south-eastern Aegean Sea, defining two warm and humid phases at 9.3-8.6 and 7.6-6.4 cal. ka b.p., associated with the deposition of the early Holocene sapropel S1, and a third one between 5.2 and 4.2 cal. ka b.p. The high sedimentation rates which characterise the study area enabled the detection of even minor and brief climatic events in the Aegean Sea during S1 deposition times. [InlineMediaObject not available: see fulltext.

Reconstructing the ecological impacts of eight decades of mining, metallurgical, and municipal activities on a small boreal lake in northern Canada.

PubMed

Doig, Lorne E; Schiffer, Stephanie T; Liber, Karsten

2015-07-01

As a result of long-term metal mining and metallurgical activities, the sediment of Ross Lake (Flin Flon, MB, Canada) is highly contaminated with metals and other elements. Although the effluents likely were discharged into Ross Lake as early as the late 1920s, lake biophysical data were not collected until 1973, more than 4 decades after the onset of mining and municipal activities. The early influence of these activities on the ecology of Ross Lake is unknown, as are the effects of improvements to metallurgical effluent quality and discontinuation of municipal wastewater discharge into the lake's north basin. To address this knowledge gap, analyses typical of paleolimnological investigations were applied to cores of sediment collected in 2009 from the south basin of Ross Lake. Stratigraphic analyses of physicochemical sediment characteristics (e.g., the concentrations of metals and other elements, organic C, total N, and δ(13)C and δ(15)N values) and subfossil remains (diatoms, Chironomidae, Chaoborus, and Cladocera) were used to infer historical biological and chemical changes in Ross Lake. With the onset of mining activities, concentrations of various elements (e.g., As, Cr, Cu, Zn, and Se) increased dramatically in the sediment profile, eventually declining with improved tailings management. Nevertheless, concentrations of metals in recent sediments remain elevated compared with pre-industrial sediments. Constrained cluster analyses demonstrated distinct pre-industrial and postindustrial communities for both the diatoms and chironomids. The biodiversity of the postindustrial diatom assemblages were much reduced compared with the pre-industrial assemblages. The postindustrial chironomid assemblage was dominated by Chironomus and to a lesser extent by Procladius, suggesting that Ross Lake became a degraded environment. Abundances of Cladocera and Chaoborus were severely reduced in the postindustrial era, likely because of metals toxicity. Overall, improvements to the management of both metallurgical and municipal effluent are reflected in the physicochemical sediment record; nevertheless, the ecology of Ross Lake remains impaired and shows minimal signs of returning to a pre-industrial state. Recommendations are made regarding possible future investigations at this site and the need for a framework to help assess causation using paleolimnological and other site data. © 2015 SETAC.

Estimation of soft sediment thickness in Kuala Lumpur based on microtremor observation data

NASA Astrophysics Data System (ADS)

Chiew, Chang Chyau; Cheah, Yi Ben; Tan, Chin Guan; Lau, Tze Liang

2017-10-01

Seismic site effect is one of the major concerns in earthquake engineering. Soft ground tends to amplify the seismic wave in surficial geological layers. The determination of soft ground thickness on the surface layers of the earth is an important input for seismic hazard assessment. This paper presents an easy and convenient approach to estimate the soft sediment thickness at the site using microtremor observation technique. A total number of 133 survey points were conducted in selected sites around Kuala Lumpur area using a microtremor measuring instrument, but only 103 survey points contributed to the seismic microzonation and sediment thickness plots. The bedrock of Kuala Lumpur area is formed by Kenny Hill Formation, limestone, granite, and the Hawthornden Schist; however, the thickness of surface soft ground formed by alluvial deposits, mine tailings, and residual soils remains unknown. Hence, the predominant frequency of the ground in each site was determined based on Nakamura method. A total number of 14 sites with known depth to bedrock from the supply of geotechnical reports in the study area were determined. An empirical correlation was developed to relate the ground predominant frequency and soft ground thickness. This correlation may contribute to local soil underlying the subsurface of Kuala Lumpur area. The finding provides an important relationship for engineers to estimate the soft ground thickness in Kuala Lumpur area based on the dynamic characteristics of the ground measured from microtremor observation.

Influence of macrofaunal assemblages and environmental heterogeneity on microphytobenthic production in experimental systems.

PubMed

Dyson, Kirstie E; Bulling, Mark T; Solan, Martin; Hernandez-Milian, Gema; Raffaelli, David G; White, Piran C L; Paterson, David M

2007-10-22

Despite the complexity of natural systems, heterogeneity caused by the fragmentation of habitats has seldom been considered when investigating ecosystem processes. Empirical approaches that have included the influence of heterogeneity tend to be biased towards terrestrial habitats; yet marine systems offer opportunities by virtue of their relative ease of manipulation, rapid response times and the well-understood effects of macrofauna on sediment processes. Here, the influence of heterogeneity on microphytobenthic production in synthetic estuarine assemblages is examined. Heterogeneity was created by enriching patches of sediment with detrital algae (Enteromorpha intestinalis) to provide a source of allochthonous organic matter. A gradient of species density for four numerically dominant intertidal macrofauna (Hediste diversicolor, Hydrobia ulvae, Corophium volutator, Macoma balthica) was constructed, and microphytobenthic biomass at the sediment surface was measured. Statistical analysis using generalized least squares regression indicated that heterogeneity within our system was a significant driving factor that interacted with macrofaunal density and species identity. Microphytobenthic biomass was highest in enriched patches, suggesting that nutrients were obtained locally from the sediment-water interface and not from the water column. Our findings demonstrate that organic enrichment can cause the development of heterogeneity which influences infaunal bioturbation and consequent nutrient generation, a driver of microphytobenthic production.

Clay mineral distribution and provenance in the Heuksan mud belt, Yellow Sea

NASA Astrophysics Data System (ADS)

Cho, Hyen Goo; Kim, Soon-Oh; Kwak, Kyeong Yoon; Choi, Hunsoo; Khim, Boo-Keun

2015-12-01

The Heuksan mud belt (HMB), located in the southeastern Yellow Sea, runs parallel to the southwest coast of Korea. In this study, the distribution and relative contribution of four major clay minerals are investigated using 101 surface sediment samples collected in the course of KIOST (2001, 2010, 2011) and KIGAM (2012) cruises, as well as 33 river sediment samples (four from the Huanghe River, three from the Changjiang River, and 26 from Korean rivers) in order to clarify the provenance of fine-grained sediments in the HMB. Based on this currently largest and most robust dataset available for interpretation, the clay mineral assemblages of the fine-grained sediments in the HMB are found to be on average composed of 64.7% illite, 17.9% chlorite, 11.4% kaolinite, and 5.9% smectite. Overall, the clay mineral assemblages are similar in both the northern and the southern parts of the HMB, although smectite seems to be relatively enriched in the southern part, whereas kaolinite is slightly more dominant in the northern part. This clearly indicates that the clays are mostly derived from Korean rivers and, in the southern part of the HMB, partly also from the Huanghe River in China. The new data thus confirm and strengthen the tentative interpretation of some earlier work based on a more limited dataset.

Diatom Surface Sediment Assemblages from the Bering Sea Shelf: a Tossed Salad or Faithful Recorder of 50 Years of Environmental Change?

NASA Astrophysics Data System (ADS)

Caissie, B.; Brigham-Grette, J.; Kanamaru-Shinn, K.

2010-12-01

Recent environmental change in the Bering Sea includes a shift from the negative to positive phase of the Pacific Decadal Oscillation in 1976/77, a secondary shift in sea level pressure and sea surface temperatures in 1998, increasing sea surface temperatures, an earlier spring, an increase in the number of days that sea ice is present along the shelf-slope break, and a decrease in the number of days that sea ice is present in the Chukchi Sea and Arctic Ocean. These physical changes have manifest biological changes such as a northward migration of invertebrates and fish from the southern Bering Sea and shifts in the timing and duration of sea-ice related primary productivity and the spring bloom. We aim to see if diatom sediment assemblages are faithful recorders of these ecological changes in the Bering Sea or if bioturbation has essentially mixed today’s rapid change down core such that the signal is either muted or no longer apparent. Six continental shelf areas were examined in the Bering Sea ranging from northeast of St. Lawrence Island to the shelf-slope break in the south-central Bering Sea. Diatom assemblages from core tops collected as part of the PROBES program in the 1960s were compared to core tops taken nearby (<40 km away) in 2006 and 2007. Additionally, diatom assemblages, magnetic susceptibility, and grain size were examined in 3 short cores (<20 cm long) from the study area. In general, the diatom assemblages remain relatively stable over the past 50 years and in some cases the variability between sites in the same area is greater than the variability over the past 50 years. However, there are several apparent changes that may reflect changing ice conditions and the related sea-ice bloom. In general, cores collected in the 1960s have a greater relative percentage of Thalassiosira antarctica resting spores than their counterparts from 2006 and 2007. T. antarctica spores are often associated with thick (>7 m) multi-year ice so their decline may be related to the decrease in multi-year ice over the past 30 years. Additionally, in most cases, species diversity has declined over the past 50 years with Fragilariopsis oceanica and Fragilariopsis cylindrus accounting for a greater percentage of the sediment assemblages today. These two species are collectively considered indicators of seasonal sea ice; their relative abundance peaks when ice is present for 5 months per year. Ongoing down core analyses in these six areas will further reveal the nature of these assemblage changes.

Dinoflagellate Cyst Contribution to Settling Organic Matter in the Coastal Ocean

NASA Astrophysics Data System (ADS)

Bringue, M.; Thunell, R.; Pospelova, V.; Tappa, E.; Johannessen, S.; Macdonald, R. W.

2016-12-01

The coastal ocean hosts much of the global primary production, with an estimated 40% of carbon sequestration occurring along continental margins alone. This study characterizes the variability in organic-walled dinoflagellate cyst fluxes and assemblage composition during sedimentation through the water column, in the context of bulk organic and inorganic particulate matter export, in three different coastal settings: the Cariaco Basin (off Venezuela), the Santa Barbara Basin (Southern California) and the Strait of Georgia (western Canada). At each site, moorings of 2-5 sediment traps positioned at different depths collected settling particles over intervals of 7-14 days. The contribution of dinoflagellate cysts to particulate matter fluxes, and their fate as they are being exported to the seafloor, is investigated by comparing cyst fluxes and assemblages in samples collected simultaneously from discrete depths at each location. Preliminary results from the 1,400 m deep Cariaco Basin sediment trap time series indicate that dinoflagellate cyst fluxes during the upwelling season are high (average of 117,000 cyst m-2 day-1 in January-February 2006) and highly consistent between depths. The only notable exception is the record from the shallowest trap (Trap Z, 150 m bsl) which shows marked variations in cyst fluxes (from 7,700 to 240,000 cyst m-2 day-1) that are not reflected in the other four trap records. Dinoflagellate cyst assemblages from each interval along the five traps are statistically identical, indicating that cysts produced in the upper water column are rapidly transported to the seafloor, and that no selective degradation/preservation has altered the cyst assemblages within the water column. Excluding the Trap Z record, the ratio of dinoflagellate cyst to organic carbon fluxes shows an 35% increase from the top to bottom traps, suggesting a dinoflagellate cyst "enrichment" relative to other organic particles in settling material.

Burdigalian turbid water patch reef environment revealed by larger benthic foraminifera

NASA Astrophysics Data System (ADS)

Novak, V.; Renema, W.; Throughflow-project

2012-04-01

Ancient isolated patch reefs outcropping from siliciclastic sediments are a trademark for the Miocene carbonate deposits occurring in East Kalimantan, Indonesia. They develop in transitional shelf sediments deposited between deltaic and deep marine deposits (Allen and Chambers, 1998). The Batu Putih Limestone (Wilson, 2005) and similar outcrops in adjacent areas have been characterized as shallow water carbonates influenced by high siliciclastic input, showing low relief patch reefs in turbid waters. Larger benthic foraminifera (LBF) are excellent markers for biochronology and paleoenvironmental reconstruction. This study aims to reveal age and paleoenvironment of a shallow water carbonate patch reef developed in mixed depositional system by using LBF and microfacies analysis. The studied section is located near Bontang, East Kalimantan, and is approximately 80 m long and 12 m high. It is placed within Miocene sediments in the central part of the Kutai Basin. Patch reef and capping sediments were logged through eight transects along section and divided into nine different lithological units from which samples were collected. Thin sections and isolated specimens of larger benthic foraminifera were analyzed and recognized to species level (where possible) providing age and environmental information. Microfacies analysis of thin sections included carbonate classification (textural scheme of Dunham, 1962) and assemblage composition of LBF, algae and corals relative abundance. Three environmentally indicative groups of LBF were separated based on test morphology, habitat or living relatives (Hallock and Glenn, 1986). Analysed foraminifera assemblage suggests Burdigalian age (Tf1). With use of microfacies analysis nine successive lithological units were grouped into five facies types. Paleoenvironmental reconstruction of LBF fossil assemblage indicate two cycles of possible deepening recorded in the section. Based on high muddy matrix ratio in analyzed thin-sections we still cannot conclude whether they were deeper water assemblage, or that they occurred in shallower water and influenced by turbid conditions as the result of terrigenous input. According to preliminary analysis and siliciclastic content in the sediments the later one should be more likely. Further work will include additional fossil groups analysis (corals, algae and bryozoans), detailed petrographical analysis and Strontium isotope stratigraphy. Allen, G.P., and Chambers, J.L.C. (1998): Sedimentation in the Modern and Miocene Mahakam Delta. Indonesian Petroleum Association, Jakarta, Indonesia, 236 p. Dunham, R.J. (1962): Classification of carbonate rocks according to their depositional texture. In: Ham, W.E., ed., Classification of Carbonate Rocks: American Association of Petroleum Geologists Memoir, v. 1, p. 108-121. Hallock, P. and Glenn, C.E. (1986): Larger Foraminifera: A tool for paleoenvironmental analysis of Cenozoic carbonate depositional facies. Palaios 1, 55-64. Wilson, M.E.J. (2005): Development of equatorial delta-front patch reefs during the Neogene, Borneo. - Journal of Sedimentary Research, 75(1): 114-133.

ANALOG: a program for estimating paleoclimate parameters using the method of modern analogs

USGS Publications Warehouse

Schweitzer, Peter N.

1994-01-01

Beginning in the 1970s with CLIMAP, paleoclimatologists have been trying to derive quantitative estimates of climatic parameters from the sedimentary record. In general the procedure is to observe the modern distribution of some component of surface sediment that depends on climate, find an empirical relationship between climate and the character of sediments, then extrapolate past climate by studying older sediments in the same way. Initially the empirical relationship between climate and components of the sediment was determined using a multiple regression technique (Imbrie and Kipp, 1971). In these studies sea-floor sediments were examined to determine the percentage of various species of planktonic foraminifera present in them. Supposing that the distribution of foraminiferal assemblages depended strongly on the extremes of annual sea-surface temperature (SST), the foraminiferal assemblages (refined through use of varimax factor analysis) were regressed against the average SST during the coolest and warmest months of the year. The result was a set of transfer functions, equations that could be used to estimate cool and warm SST from the faunal composition of a sediment sample. Assuming that the ecological preference of the species had remained constant throughout the last several hundred thousand years, these transfer functions could be used to estimate SSTs during much of the late Pleistocene. Hutson (1980) and Overpeck, Webb, and Prentice (1985) proposed an alternative approach to estimating paleoclimatic parameters. Their 'method of modern analogs' revolved not around the existence of a few climatically-sensitive faunal assemblages but rather on the expectation that similar climatic regimes should foster similar faunal and floral assemblages. From a large pool of modern samples, those few are selected whose faunal compositions are most similar to a given fossil sample. Paleoclimate estimates are derived using the climatic character of only the most similar modern samples, the modern analogs of the fossil sample. This report describes how to use the program ANALOG to carry out the method of modern analogs. It is assumed that the user has faunal census estimates of one or more fossil samples, and one or more sets of faunal data from modern samples. Furthermore, the user must understand the taxonomic categories represented in the data sets, and be able to recognize taxa that are or may be considered equivalent in the analysis. ANALOG provides the user with flexibility in input data format, output data content, and choice of distance measure, and allows the user to determine which taxa from each modern and fossil data file are compared. Most of the memory required by the program is allocated dynamically, so that, on systems that permit program segments to grow, the program consumes only as many system resources as are needed to accomplish its task.

Dam removal, connectivity, and aquatic resources in the St. Regis River Watershed, New York

USGS Publications Warehouse

McKenna, James E.; Hanak, Kaitlin; DeVilbiss, Katharine; David, Anthony; Johnson, James H.

2015-10-09

The decommissioning and planned removal of the Hogansburg Dam on the St. Regis River in New York has stimulated interest in the potential effects of that barrier removal on the St. Regis watershed. There will be immediate and systemic effects of the Hogansburg Dam removal, which may include inundation of habitats below the dam or dewatering of habitats above the dam, possibly affecting local fish assemblages and (or) local native mussel assemblages; and expansion of stream network connectivity, which has the potential to open a large area of the watershed to migratory aquatic species. Information was collected about biota, water quality, sediment distribution, riverbed dimensions in the vicinity of the dam, and habitat characteristics of headwater sample sites. Complete fish assemblages were collected, but species of special concern associated with the connectivity changes included, American Eel, Atlantic Salmon, Brook Trout, Eastern Sand Darter, and Lake Sturgeon. Freshwater mussels in the vicinity of the dam also were examined and may be at risk of exposure (without a rescue plan) after dam removal. Reservoir sediment will be transported downstream and will alter aquatic habitat as it moves through the system. The dam removal will open more than 440 kilometers of stream habitat to migratory species, allowing them to more easily complete their life cycles. Fish assemblages above the dam may be altered by migrating fishes, but resident Brook Trout are not expected to be adversely affected.

Molluscan shell communities: a window into the ecological history of the northern Adriatic Sea

NASA Astrophysics Data System (ADS)

Gallmetzer, Ivo; Haselmair, Alexandra; Tomasovych, Adam; Stachowitsch, Michael; Zuschin, Martin

2015-04-01

The historical ecology approach used in the present study sheds light on the younger ecological history of the northern Adriatic Sea, targeting the period of the last 500 to 1500 years. We focus on down-core changes in molluscan death assemblages, where differences between community structures serve as a proxy for ecological shifts over time. The northern Adriatic Sea, with its densely populated shoreline, is among the most degraded marine ecosystems worldwide and is therefore particularly suited to study ecosystem modification under human pressure. Multiple cores of 1.5 m length and diameters of 90 and 160 mm were taken at seven sampling stations throughout the northern Adriatic Sea, covering different sediment types, nutrient conditions and degrees of exploitation. For the mollusc analyses, the cores were sliced into smaller subsamples and analysed for species composition, abundance, taxonomic similarity, evidence for ecological interactions (i.e., frequencies of drilling predation) and taphonomic condition of shells. Sediment analyses include granulometry and radiometric sediment dating using Pb 210. Sediment age analysis revealed one-order-of-magnitude differences in sedimentation rates between stations (34 mm/yr at the Po delta, Italy, 1.5 mm/yr at Brijuni islands, Croatia). In total, 114 bivalve and 112 gastropod species were recorded. Bivalve assemblages showed significant interregional differences that are strongly correlated with sedimentation rates and sediment composition. Down-core changes in molluscan communities are conspicuous in all cores, particularly in the uppermost core sections. This information, together with radiometric shell dating for selected species, helps to specify the timing of major ecological changes in the past and define pristine benthic communities as references for future conservation and management efforts.

Oyster Saccostrea cucullata as a biomonitor for Hg contamination and the risk to humans on the coast of Qeshm Island, Persian Gulf, Iran.

PubMed

Shirneshan, Golshan; Bakhtiari, Alireza Riyahi; Kazemi, Ali; Mohamadi, Mohsen; Kheirabadi, Nabiallah

2012-06-01

A total of 174 individuals of rocky oysters (Saccostrea cucullata) and 35 surface sediment samples were collected from seven stations off the intertidal zones of Qeshm Island, Persian Gulf, in order to study the concentration of mercury in oysters' tissues, and to investigate whether mercury concentrations in the edible soft tissues are within the permissible limits for public health. The average mercury concentrations were found as 3.44, 50.66 and 2.29 μg kg(-1) dw in the sediments, soft tissues and shells of the oysters, respectively. Results indicated that the levels of mercury in sediment differed significantly between the stations. In addition, results confirmed that the soft tissues of oysters could be a good indicator of mercury in the aquatic system. In comparison with food safety standards, mercury levels in oysters were well within the permissible limits for human consumption.

Late Pliocene diatoms in a diatomite from Prydz Bay, East Antarctica

USGS Publications Warehouse

Mahood, A.D.; Barron, J.A.

1996-01-01

Very well-preserved Pliocene diatoms from a diatomite unit interbedded within glacial sediments at Ocean Drilling Program Site 742 in Prydz Bay, Antarctica are documented and illustrated. The presence of Thalassiosira kolbei, T. torokina, Actinocyclus actinochilus, A. karstenii and the absence of Nitzschia interfrigidaria. T. insigna and T. vulnifica in Sample 119-742A-15R-4, 44-46cm constrain its age to ca. 2.2-1.8 Ma (late Pliocene). Diatoms associated with sea ice constitute 35% of the Pliocene diatom assemblage, compared with 71% of the modern sediment assemblage at the site, suggesting that sea ice was present during the late Pliocene period of deposition of the sample, although it probably was not the significant feature it is today. Thalassiosira ellitipora (Donahue) Fenner is described and illustrated in detail and is validly published. An expanded description and numerous illustrations are also presented for T. torokina Brady.

Provenance of Holocene sediment on the Chukchi-Alaskan margin based on combined diffuse spectral reflectance and quantitative X-Ray Diffraction analysis

USGS Publications Warehouse

Ortiz, J.D.; Polyak, L.; Grebmeier, J.M.; Darby, D.; Eberl, D.D.; Naidu, S.; Nof, D.

2009-01-01

Sediment clay and silt mineral assemblages provide an excellent means of assessing the provenance of fine-grained Arctic sediment especially when a unique mineral assemblage can be tied to specific source areas. The diffuse spectral reflectance (DSR) first derivative measurements and quantitative X-Ray Diffraction (qXRD) on a high-resolution sediment core from the continental slope north of Alaska constrain the sediment mineralogy. DSR results are augmented by measurements on several adjacent cores and compared to surface sediment samples from the northern Alaskan shelf and slope. Using Principal Component Analysis (PCA), we infer that the three leading DSR modes relate to mixtures of smectite + dolomite, illite + goethite, and chlorite + muscovite. This interpretation is consistent with the down core qXRD results. While the smectite + dolomite, and illite + goethite factors show increased variability down core, the chlorite + muscovite factor had highest positive loadings in the middle Holocene, between ca. 6.0 and 3.6??ka. Because the most likely source of the chlorite + muscovite suite in this vicinity lies in the North Pacific, we argue that the oscillations in chlorite + muscovite values likely reflect an increase in the inflow of Pacific water to the Arctic through the Bering Strait. The time interval of this event is associated in other parts of the globe with a non-linear response of the climate system to the decrease in insolation, which may be related to changes in water exchange between the Pacific and Arctic Ocean. ?? 2009 Elsevier B.V.

Sediment-hosted micro-disseminated gold mineralization constrained by basin paleo-topographic highs in the Youjiang basin, South China

NASA Astrophysics Data System (ADS)

Liu, Jianming; Ye, Jie; Ying, Hanlong; Liu, Jiajun; Zheng, Minghua; Gu, Xuexiang

2002-06-01

The Youjiang basin is a Devonian-Triassic rift basin on the southern margin of the Yangtze Craton in South China. Strong syndepositional faulting defined the basin-and-range style paleo-topography that further developed into isolated carbonate platforms surrounded by siliciclastic filled depressions. Finally, thick Triassic siliciclastic deposits covered the platforms completely. In the Youjiang basin, numerous sediment-hosted, micro-disseminated gold (SMG) deposits occur mainly in Permian-Triassic chert and siliciclastic rocks. SMG ores are often auriferous sedimentary rocks with relatively low sulfide contents and moderate to weak alteration. Similar to Carlin-type gold ores in North America, SMG ores in the Youjiang basin are characterized by low-temperature mineral assemblages of pyrite, arsenopyrite, realgar, stibnite, cinnabar, marcasite, chalcedony and carbonate. Most of the SMG deposits are remarkably distributed around the carbonate platforms. Accordingly, there are platform-proximal and platform-distal SMG deposits. Platform-proximal SMG deposits often occur in the facies transition zone between the underlying platform carbonate rocks and the overlying siliciclastic rocks with an unconformity (often a paleo-karst surface) in between. In the ores and hostrocks there are abundant synsedimentary-syndiagenetic fabrics such as lamination, convolute bedding, slump texture, soft-sediment deformation etc. indicating submarine hydrothermal deposition and syndepositional faulting. Numerous fluid-escape and liquefaction fabrics imply strong fluid migration during sediment basin evolution. Such large-scale geological and fabric evidence implies that SMG ores were formed during basin evolution, probably in connection with basinal fluids. It is well known that basinal fluids (especially sediment-sourced fluids) will migrate generally (1) upwards, (2) towards basin margins or basin topographic highs, (3) and from thicker towards thinner deposits during basin evolution. The isolated carbonate platform (as a basin paleo-high) and related syndepositional fault system, together with the unconformity-related facies succession, may have controlled the migration pathway of ore-forming basinal fluids and subsequently determined the location of SMG deposits in the Youjiang basin. Unlike Carlin-type gold deposits, SMG mineralization in the Youjiang basin may represent an integral aspect of the dynamic evolution of extensional basins along divergent continental margins.

Sediment and carbon deposition vary among vegetation assemblages in a coastal salt marsh

NASA Astrophysics Data System (ADS)

Kelleway, Jeffrey J.; Saintilan, Neil; Macreadie, Peter I.; Baldock, Jeffrey A.; Ralph, Peter J.

2017-08-01

Coastal salt marshes are dynamic, intertidal ecosystems that are increasingly being recognised for their contributions to ecosystem services, including carbon (C) accumulation and storage. The survival of salt marshes and their capacity to store C under rising sea levels, however, is partially reliant upon sedimentation rates and influenced by a combination of physical and biological factors. In this study, we use several complementary methods to assess short-term (days) deposition and medium-term (months) accretion dynamics within a single marsh that contains three salt marsh vegetation types common throughout southeastern (SE) Australia.We found that surface accretion varies among vegetation assemblages, with medium-term (19 months) bulk accretion rates in the upper marsh rush (Juncus) assemblage (1.74 ± 0.13 mm yr-1) consistently in excess of estimated local sea-level rise (1.15 mm yr-1). Accretion rates were lower and less consistent in both the succulent (Sarcocornia, 0.78 ± 0.18 mm yr-1) and grass (Sporobolus, 0.88 ± 0.22 mm yr-1) assemblages located lower in the tidal frame. Short-term (6 days) experiments showed deposition within Juncus plots to be dominated by autochthonous organic inputs with C deposition rates ranging from 1.14 ± 0.41 mg C cm-2 d-1 (neap tidal period) to 2.37 ± 0.44 mg C cm-2 d-1 (spring tidal period), while minerogenic inputs and lower C deposition dominated Sarcocornia (0.10 ± 0.02 to 0.62 ± 0.08 mg C cm-2 d-1) and Sporobolus (0.17 ± 0.04 to 0.40 ± 0.07 mg C cm-2 d-1) assemblages.Elemental (C : N), isotopic (δ13C), mid-infrared (MIR) and 13C nuclear magnetic resonance (NMR) analyses revealed little difference in either the source or character of materials being deposited among neap versus spring tidal periods. Instead, these analyses point to substantial redistribution of materials within the Sarcocornia and Sporobolus assemblages, compared to high retention and preservation of organic inputs in the Juncus assemblage. By combining medium-term accretion quantification with short-term deposition measurements and chemical analyses, we have gained novel insights into above-ground biophysical processes that may explain previously observed regional differences in surface dynamics among key salt marsh vegetation assemblages. Our results suggest that Sarcocornia and Sporobolus assemblages may be particularly susceptible to changes in sea level, though quantification of below-ground processes (e.g. root production, compaction) is needed to confirm this.

Benthic assemblages on artificial reefs in the northwestern Adriatic Sea: does structure type and age matter?

PubMed

Ponti, Massimo; Fava, Federica; Perlini, Rossella Angela; Giovanardi, Otello; Abbiati, Marco

2015-03-01

The use of artificial reefs is on the rise worldwide. While their fish aggregating effects are well known, the epibenthic assemblages have been poorly investigated. Two types of artificial reefs (pyramids of concrete slabs and bundles of concrete tubes) have been deployed out of the Po River Delta in 2006 and 2010. The epibenthic assemblages were investigated in 2009 and 2012. Benthic assemblages on both structure typologies were dominated by species tolerating high sedimentation rates. Dissimilarities were found among assemblages with different ages, and, in less extend, between reef typologies. Colonisation by Mytilus galloprovincialis and other major space occupiers did not follow a clear succession pattern and was not affected by reef typology. Species colonisation was likely driven by variability in environmental conditions and recruitment processes rather than by reef typology. This study suggests that environmental features of the deployment sites should be carefully considered in planning and designing artificial reefs, especially in eutrophic and turbid coastal waters, exposed to high river loads. Copyright © 2014 Elsevier Ltd. All rights reserved.

Evaluating a 5-year metal contamination remediation and the biomonitoring potential of a freshwater gastropod along the Xiangjiang River, China.

PubMed

Li, Deliang; Pi, Jie; Zhang, Ting; Tan, Xiang; Fraser, Dylan J

2018-05-16

Effective remediation of heavy metal pollution in aquatic systems is desired in many regions, but it requires integrative assessments of sediments, water, and biota that can serve as robust biomonitors. We assessed the effects of a 5-year metal contamination remediation along the Xiangjiang River, China, by comparing concentrations of trace metals in water and surface sediments between 2010-2011 and 2016. We also explored the trace metal biomonitoring potential of a freshwater gastropod (Bellamya aeruginosa). Metal concentrations in water (means and ranges) dropped over time to within permissible limits of drinking water guidelines set by China, USEPA, and WHO in 2016. Although sediment means and ranges of Cd, Pb, Zn, and Mn also diminished with remediation, those for Cr and Cu slightly increased, and all six metals retained concentrations higher than standards set by China. All metals in sediments could also be associated with anthropogenic inputs using a hierarchical clustering analysis, and they generate high potential ecological risks based on several indices, especially for Cd and As. The bio-sediment accumulation factors of all measured trace metals in gastropod soft tissues and shells were lower than 1.0, except for Ca. Trace metal contents in gastropods were positively correlated with those in water and surface sediments for As (soft tissues) and Cr (shells). Collectively, our results do not yet highlight strong beneficial effects of 5-year remediation and clearly illustrate the heavy metal pollution remaining in Xiangjiang River sediment. Additional physical, chemical, and biological measurements should be implemented to improve sediment quality. We further conclude that gastropod soft tissues and shells can be suitable biomonitors of spatial differences in some heavy metals found within river sediments (e.g., As, Cr).

Paleontological interpretations of crater processes and infilling of synimpact sediments from the Chesapeake Bay impact structure

USGS Publications Warehouse

Self-Trail, Jean M.; Edwards, Lucy E.; Litwin, Ronald J.

2009-01-01

Biostratigraphic analysis of sedimentary breccias and diamictons in the Chesapeake Bay impact structure provides information regarding the timing and processes of late-stage gravitational crater collapse and ocean resurge. Studies of calcareous nannofossil and palynomorph assemblages in the International Continental Scientific Drilling Program (ICDP)–U.S. Geological Survey (USGS) Eyreville A and B cores show the mixed-age, mixed-preservation microfossil assemblages that are typical of deposits from the upper part of the Chesapeake Bay impact structure. Sparse, poorly preserved, possibly thermally altered pollen is present within a gravelly sand interval below the granite slab at 1392 m in Eyreville core B, an interval that is otherwise barren of calcareous nannofossils and dinocysts. Gravitational collapse of water- saturated sediments from the transient crater wall resulted in the deposition of sediment clasts primarily derived from the nonmarine Cretaceous Potomac Formation. Collapse occurred before the arrival of resurge. Low pollen Thermal Alteration Index (TAI) values suggest that these sediments were not thermally altered by contact with the melt sheet. The arrival of resurge sedimentation is identified based on the presence of diamicton zones and stringers rich in glauconite and marine microfossils at 866.7 m. This horizon can be traced across the crater and can be used to identify gravitational collapse versus ocean-resurge sedimentation. Glauconitic quartz sand diamicton dominates the sediments above 618.2 m. Calcareous nannofossil and dino-flagellate data from this interval suggest that the earliest arriving resurge from the west contained little or no Cretaceous marine input, but later resurge pulses mined Cretaceous sediments east of the Watkins core in the annular trough. Additionally, the increased distance traveled by resurge to the central crater in turbulent flow conditions resulted in the disaggregation of Paleogene unconsolidated sediments. As a result, intact Paleogene clasts in Eyreville cores are rare, but clasts of semilithified Potomac Formation silts and clays are common.

Paleontological interpretations of crater processes and infilling of synimpact sediments from the Chesapeake Bay impact structure

USGS Publications Warehouse

,; Edwards, L.E.; Litwin, R.J.

2009-01-01

Biostratigraphic analysis of sedimentary breccias and diamictons in the Chesapeake Bay impact structure provides information regarding the timing and processes of late-stage gravitational crater collapse and ocean resurge. Studies of calcareous nannofossil and palynomorph assemblages in the International Continental Scientific Drilling Program (ICDP)-U.S. Geological Survey (USGS) Eyreville A and B cores show the mixed-age, mixed-preservation microfossil assemblages that are typical of deposits from the upper part of the Chesapeake Bay impact structure. Sparse, poorly preserved, possibly thermally altered pollen is present within a gravelly sand interval below the granite slab at 1392 m in Eyreville core B, an interval that is otherwise barren of calcareous nannofossils and dinocysts. Gravitational collapse of watersaturated sediments from the transient crater wall resulted in the deposition of sediment clasts primarily derived from the nonmarine Cretaceous Potomac Formation. Collapse occurred before the arrival of resurge. Low pollen Thermal Alteration Index (TAI) values suggest that these sediments were not thermally altered by contact with the melt sheet. The arrival of resurge sedimentation is identified based on the presence of diamicton zones and stringers rich in glauconite and marine microfossils at 866.7 m. This horizon can be traced across the crater and can be used to identify gravitational collapse versus ocean-resurge sedimentation. Glauconitic quartz sand diamicton dominates the sediments above 618.2 m. Calcareous nannofossil and dinoflagellate data from this interval suggest that the earliest arriving resurge from the west contained little or no Cretaceous marine input, but later resurge pulses mined Cretaceous sediments east of the Watkins core in the annular trough. Additionally, the increased distance traveled by resurge to the central crater in turbulent flow conditions resulted in the disaggregation of Paleogene unconsolidated sediments. As a result, intact Paleogene clasts in Eyreville cores are rare, but clasts of semilithified Potomac Formation silts and clays are common. ?? 2009 The Geological Society of America.

Trends in the distribution of recent foraminifera in San Francisco Bay

USGS Publications Warehouse

Arnal, R.E.; Quinterno, P.J.; Conomos, T.J.; Gram, Ralph

1980-01-01

Thirty-one species of benthonic foraminifera were identified in surficial sediments of San Francisco Bay estuary; of these, 20 species were stained red by rose Bengal and are considered as live. Water depth, sediment textural characteristics, salinity, organic matter, sediment pH, and biological competition were considered as factors that might affect distribution of foraminifera. Four ecologic zones based on observed trends in the distribution and abundance of several species correlate well with some environmental factors. Four groups based on the Q-mode analysis of frequency counts of foraminiferal assemblages are reasonably similar to the four ecologic zones. These zones, showing restricted depth ranges, are: Inner Coastal Zone, where Elphidium incertum obscurum and Trochammina infiata are prominent; Outer Coastal Zone, dominated by Ammonia beccarii tepida and Elphidium incatum; Deep Bay Zone, where Elphidietla hannai, Elphidium incertum clavatum, Hopkinsina pacifica, and Bolivina spp. appear in abundance; and Deep Channel Zone, where Elphidiella hannai is most abundant. In the Inner Coastal Zone, salinity due to large fluctuations is a limiting factor for many species. Substrate textural characteristics are primary determinants of the distribution of agglutinated foraminifers. The percentage of organic matter in the sediment correlates well with the abundance of Elphidium incertum obscurum, a ubiquitous species in San Francisco Bay. Sediment pH is not critical. Biologic competition can be estimated by comparing the percentage of a species with the number of species present in the assemblage, as shown for Ammonia beccarii tepida and Elphidiella hannai.

Assessing differences in macrofaunal assemblages as a factor of sieve mesh size, distance between samples, and time of sampling.

PubMed

Hemery, Lenaïg G; Politano, Kristin K; Henkel, Sarah K

2017-08-01

With increasing cascading effects of climate change on the marine environment, as well as pollution and anthropogenic utilization of the seafloor, there is increasing interest in tracking changes to benthic communities. Macrofaunal surveys are traditionally conducted as part of pre-incident environmental assessment studies and post-incident monitoring studies when there is a potential impact to the seafloor. These surveys usually characterize the structure and/or spatiotemporal distribution of macrofaunal assemblages collected with sediment cores; however, many different sampling protocols have been used. An assessment of the comparability of past and current survey methods was in need to facilitate future surveys and comparisons. This was the aim of the present study, conducted off the Oregon coast in waters 25-35 m deep. Our results show that the use of a sieve with a 1.0-mm mesh size gives results for community structure comparable to results obtained from a 0.5-mm mesh size, which allows reliable comparisons of recent and past spatiotemporal surveys of macroinfauna. In addition to our primary objective of comparing methods, we also found interacting effects of seasons and depths of collection. Seasonal differences (summer and fall) were seen in infaunal assemblages in the wave-induced sediment motion zone but not deeper. Thus, studies where wave-induced sediment motion can structure the benthic communities, especially during the winter months, should consider this effect when making temporal comparisons. In addition, some macrofauna taxa-like polychaetes and amphipods show high interannual variabilities, so spatiotemporal studies should make sure to cover several years before drawing any conclusions.

Effects of Non-Indigenous Oysters on Microbial Diversity and Ecosystem Functioning

PubMed Central

Green, Dannielle S.; Boots, Bas; Crowe, Tasman P.

2012-01-01

Invasive ecosystem engineers can physically and chemically alter the receiving environment, thereby affecting biodiversity and ecosystem functioning. The Pacific oyster, Crassostrea gigas, invasive throughout much of the world, can establish dense populations monopolising shorelines and possibly altering ecosystem processes including decomposition and nutrient cycling. The effects of increasing cover of invasive C. gigas on ecosystem processes and associated microbial assemblages in mud-flats were tested experimentally in the field. Pore-water nutrients (NH4 + and total oxidised nitrogen), sediment chlorophyll content, microbial activity, total carbon and nitrogen, and community respiration (CO2 and CH4) were measured to assess changes in ecosystem functioning. Assemblages of bacteria and functionally important microbes, including methanogens, methylotrophs and ammonia-oxidisers were assessed in the oxic and anoxic layers of sediment using terminal restriction length polymorphism of the bacterial 16S rRNA, mxaF, amoA and archaeal mcrA genes respectively. At higher covers (40 and 80%) of oysters there was significantly greater microbial activity, increased chlorophyll content, CO2 (13 fold greater) and CH4 (6 fold greater) emission from the sediment compared to mud-flats without C. gigas. At 10% cover, C. gigas increased the concentration of total oxidised nitrogen and altered the assemblage structure of ammonia-oxidisers and methanogens. Concentrations of pore-water NH4 + were increased by C. gigas regardless of cover. Invasive species can alter ecosystem functioning not only directly, but also indirectly, by affecting microbial communities vital for the maintenance of ecosystem processes, but the nature and magnitude of these effects can be non-linear, depending on invader abundance. PMID:23144762

Approaching trophic structure in Late Jurassic neritic shelves: A western Tethys example from southern Iberia

NASA Astrophysics Data System (ADS)

Olóriz, Federico; Reolid, Matías; Rodríguez-Tovar, Francisco J.

2006-11-01

The palaeoenvironmental conditions and trophic structure of a mid-outer neritic biota (microfossils, mainly forams, and macroinvertebrate assemblages) have been approached in middle Oxfordian-lowermost Kimmeridgian deposits from the Prebetic Zone (Betic Cordillera) in south-eastern Spain. According to relationships between fossil assemblages and lithofacies, a general seaward trend is identified which displays decreasing sedimentation rates and nutrient inputs, but increasing substrate consistency and presumably depth. Midshelf, terrigenous-rich deposits in the External Prebetic relate to the highest sedimentation rates and nutrient availability. These two parameters correlate with the highest content in vagile-benthic, calcareous perforate, epifaunal forams, as well as with potentially deep infaunal forams and infaunal macroinvertebrates. Outer-shelf lumpy deposits in the Internal Prebetic show the lowest sedimentation rates and nutrient availability and the highest records for macro-micro nektonics and planktics. In contrast, vagile-benthic, calcareous perforate epifaunal and potentially deep infaunal forams are scarcer in the midshelf environments. Colonial encrusting forams, benthic microbial communities and sessile benthic macro-invertebrates increase from the middle to outer shelf. Trophic-analysis structuring through the integration of benthic microbial communities, foraminiferal and macroinvertebrate fossil assemblages makes it possible to interpret: (a) a trophic-level frame composed of producers and primary and secondary consumers; (b) a main trophic-group differentiation in suspension-feeders, detritus-feeders, browsers, grazers, carnivores and scavengers; (c) a preliminary approach to food-chain structure supported by suspension-feeders, deposit-feeders and predators (active prey-selection carnivores); and (d) a food-pyramid model, which takes into account both recorded fossils and envisaged —i.e., ecologically inferred-organisms.

River suspended sediment estimation by climatic variables implication: Comparative study among soft computing techniques

NASA Astrophysics Data System (ADS)

Kisi, Ozgur; Shiri, Jalal

2012-06-01

Estimating sediment volume carried by a river is an important issue in water resources engineering. This paper compares the accuracy of three different soft computing methods, Artificial Neural Networks (ANNs), Adaptive Neuro-Fuzzy Inference System (ANFIS), and Gene Expression Programming (GEP), in estimating daily suspended sediment concentration on rivers by using hydro-meteorological data. The daily rainfall, streamflow and suspended sediment concentration data from Eel River near Dos Rios, at California, USA are used as a case study. The comparison results indicate that the GEP model performs better than the other models in daily suspended sediment concentration estimation for the particular data sets used in this study. Levenberg-Marquardt, conjugate gradient and gradient descent training algorithms were used for the ANN models. Out of three algorithms, the Conjugate gradient algorithm was found to be better than the others.

Hydrocarbon Degradation in Caspian Sea Sediment Cores Subjected to Simulated Petroleum Seepage in a Newly Designed Sediment-Oil-Flow-Through System.

PubMed

Mishra, Sonakshi; Wefers, Peggy; Schmidt, Mark; Knittel, Katrin; Krüger, Martin; Stagars, Marion H; Treude, Tina

2017-01-01

The microbial community response to petroleum seepage was investigated in a whole round sediment core (16 cm length) collected nearby natural hydrocarbon seepage structures in the Caspian Sea, using a newly developed Sediment-Oil-Flow-Through (SOFT) system. Distinct redox zones established and migrated vertically in the core during the 190 days-long simulated petroleum seepage. Methanogenic petroleum degradation was indicated by an increase in methane concentration from 8 μM in an untreated core compared to 2300 μM in the lower sulfate-free zone of the SOFT core at the end of the experiment, accompanied by a respective decrease in the δ 13 C signal of methane from -33.7 to -49.5‰. The involvement of methanogens in petroleum degradation was further confirmed by methane production in enrichment cultures from SOFT sediment after the addition of hexadecane, methylnapthalene, toluene, and ethylbenzene. Petroleum degradation coupled to sulfate reduction was indicated by the increase of integrated sulfate reduction rates from 2.8 SO 4 2- m -2 day -1 in untreated cores to 5.7 mmol SO 4 2- m -2 day -1 in the SOFT core at the end of the experiment, accompanied by a respective accumulation of sulfide from 30 to 447 μM. Volatile hydrocarbons (C2-C6 n -alkanes) passed through the methanogenic zone mostly unchanged and were depleted within the sulfate-reducing zone. The amount of heavier n -alkanes (C10-C38) decreased step-wise toward the top of the sediment core and a preferential degradation of shorter (C30) was seen during the seepage. This study illustrates, to the best of our knowledge, for the first time the development of methanogenic petroleum degradation and the succession of benthic microbial processes during petroleum passage in a whole round sediment core.

Hydrocarbon Degradation in Caspian Sea Sediment Cores Subjected to Simulated Petroleum Seepage in a Newly Designed Sediment-Oil-Flow-Through System

PubMed Central

Mishra, Sonakshi; Wefers, Peggy; Schmidt, Mark; Knittel, Katrin; Krüger, Martin; Stagars, Marion H.; Treude, Tina

2017-01-01

The microbial community response to petroleum seepage was investigated in a whole round sediment core (16 cm length) collected nearby natural hydrocarbon seepage structures in the Caspian Sea, using a newly developed Sediment-Oil-Flow-Through (SOFT) system. Distinct redox zones established and migrated vertically in the core during the 190 days-long simulated petroleum seepage. Methanogenic petroleum degradation was indicated by an increase in methane concentration from 8 μM in an untreated core compared to 2300 μM in the lower sulfate-free zone of the SOFT core at the end of the experiment, accompanied by a respective decrease in the δ13C signal of methane from -33.7 to -49.5‰. The involvement of methanogens in petroleum degradation was further confirmed by methane production in enrichment cultures from SOFT sediment after the addition of hexadecane, methylnapthalene, toluene, and ethylbenzene. Petroleum degradation coupled to sulfate reduction was indicated by the increase of integrated sulfate reduction rates from 2.8 SO42-m-2 day-1 in untreated cores to 5.7 mmol SO42-m-2 day-1 in the SOFT core at the end of the experiment, accompanied by a respective accumulation of sulfide from 30 to 447 μM. Volatile hydrocarbons (C2–C6 n-alkanes) passed through the methanogenic zone mostly unchanged and were depleted within the sulfate-reducing zone. The amount of heavier n-alkanes (C10–C38) decreased step-wise toward the top of the sediment core and a preferential degradation of shorter (C30) was seen during the seepage. This study illustrates, to the best of our knowledge, for the first time the development of methanogenic petroleum degradation and the succession of benthic microbial processes during petroleum passage in a whole round sediment core. PMID:28503172

Biodiversity and community composition of sediment macrofauna associated with deep-sea Lophelia pertusa habitats in the Gulf of Mexico

USGS Publications Warehouse

Demopoulos, Amanda W.J.; Bourque, Jill R.; Frometa, Janessy

2014-01-01

Scleractinian corals create three-dimensional reefs that provide sheltered refuges, facilitate sediment accumulation, and enhance colonization of encrusting fauna. While heterogeneous coral habitats can harbor high levels of biodiversity, their effect on the community composition within nearby sediments remains unclear, particularly in the deep sea. Sediment macrofauna from deep-sea coral habitats (Lophelia pertusa) and non-coral, background sediments were examined at three sites in the northern Gulf of Mexico (VK826, VK906, MC751, 350–500 m depth) to determine whether macrofaunal abundance, diversity, and community composition near corals differed from background soft-sediments. Macrofaunal densities ranged from 26 to 125 individuals 32 cm−2 and were significantly greater near coral versus background sediments only at VK826. Of the 86 benthic invertebrate taxa identified, 16 were exclusive to near-coral habitats, while 14 were found only in background sediments. Diversity (Fisher’s α) and evenness were significantly higher within near-coral sediments only at MC751 while taxon richness was similar among all habitats. Community composition was significantly different both between near-coral and background sediments and among the three primary sites. Polychaetes numerically dominated all samples, accounting for up to 70% of the total individuals near coral, whereas peracarid crustaceans were proportionally more abundant in background sediments (18%) than in those near coral (10%). The reef effect differed among sites, with community patterns potentially influenced by the size of reef habitat. Taxon turnover occurred with distance from the reef, suggesting that reef extent may represent an important factor in structuring sediment communities near L. pertusa. Polychaete communities in both habitats differed from other Gulf of Mexico (GOM) soft sediments based on data from previous studies, and we hypothesize that local environmental conditions found near L. pertusa may influence the macrofaunal community structure beyond the edges of the reef. This study represents the first assessment of L. pertusa-associated sediment communities in the GOM and provides baseline data that can help define the role of transition zones, from deep reefs to soft sediments, in shaping macrofaunal community structure and maintaining biodiversity; this information can help guide future conservation and management activities.

A Biogeotechnical approach to Stabilize Soft Marine Soil with a Microbial Organic Material called Biopolymer

NASA Astrophysics Data System (ADS)

Chang, I.; Cho, G. C.; Kwon, Y. M.; Im, J.

2017-12-01

The importance and demands of offshore and coastal area development are increasing due to shortage of usable land and to have access to valuable marine resources. However, most coastal soils are soft sediments, mainly composed with fines (silt and clay) and having high water and organic contents, which induce complicated mechanical- and geochemical- behaviors and even be insufficient in Geotechnical engineering aspects. At least, soil stabilization procedures are required for those soft sediments, regardless of the purpose of usage on the site. One of the most common soft soil stabilization method is using ordinary cement as a soil strengthening binder. However, the use of cement in marine environments is reported to occur environmental concerns such as pH increase and accompanying marine ecosystem disturbance. Therefore, a new environmentally-friendly treatment material for coastal and offshore soils. In this study, a biopolymer material produced by microbes is introduced to enhance the physical behavior of a soft tidal flat sediment by considering the biopolymer rheology, soil mineralogy, and chemical properties of marine water. Biopolymer material used in this study forms inter-particle bonds between particles which is promoted through cation-bridges where the cations are provided from marine water. Moreover, biopolymer treatment renders unique stress-strain relationship of soft soils. The mechanical stiffness (M) instantly increase with the presence of biopolymer, while time-dependent settlement behavior (consolidation) shows a big delay due to the viscous biopolymer hydrogels in pore spaces.

Biogeochemical flux and phytoplankton succession: A year-long sediment trap record in the Australian sector of the Subantarctic Zone

NASA Astrophysics Data System (ADS)

Wilks, Jessica V.; Rigual-Hernández, Andrés S.; Trull, Thomas W.; Bray, Stephen G.; Flores, José-Abel; Armand, Leanne K.

2017-03-01

The Subantarctic Zone (SAZ) plays a crucial role in global carbon cycling as a significant sink for atmospheric CO2. In the Australian sector, the SAZ exports large quantities of organic carbon from the surface ocean, despite lower algal biomass accumulation in surface waters than other Southern Ocean sectors. We present the first analysis of diatom and coccolithophore assemblages and seasonality, as well as the first annual quantification of bulk organic components of captured material at the base of the mixed layer (500 m depth) in the SAZ. Sediment traps were moored in the SAZ southwest of Tasmania as part of the long-term SAZ Project for one year (September 2003 to September 2004). Annual mass flux at 500 m and 2000 m was composed mainly of calcium carbonate, while biogenic silica made up on average <10% of material captured in the traps. Organic carbon flux was estimated at 1.1 g m-2 y-1 at 500 m, close to the estimated global mean carbon flux. Low diatom fluxes and high fluxes of coccoliths were consistent with low biogenic silica and high calcium carbonate fluxes, respectively. Diatoms and coccoliths were identified to species level. Diatom and coccolithophore sinking assemblages reflected some seasonal ecological succession. A theoretical scheme of diatom succession in live assemblages is compared to successional patterns presented in sediment traps. This study provides a unique, direct measurement of the biogeochemical fluxes and their main biological carbon vectors just below the winter mixed layer depth at which effective sequestration of carbon occurs. Comparison of these results with previous sediment trap deployments at the same site at deeper depths (i.e. 1000, 2000 and 3800 m) documents the changes particle fluxes experience in the lower "twilight zone" where biological processes and remineralisation of carbon reduce the efficiency of carbon sequestration.

Fish assemblages and environmental variables associated with hard-rock mining in the Coeur d'Alene River basin, Idaho

USGS Publications Warehouse

Maret, Terry R.; MacCoy, Dorene E.

2002-01-01

As part of the U.S. Geological Survey's National Water Quality Assessment Program, fish assemblages, environmental variables, and associated mine densities were evaluated at 18 test and reference sites during the summer of 2000 in the Coeur d'Alene and St. Regis river basins in Idaho and Montana. Multimetric and multivariate analyses were used to examine patterns in fish assemblages and the associated environmental variables representing a gradient of mining intensity. The concentrations of cadmium (Cd), lead (Pb), and zinc (Zn) in water and streambed sediment found at test sites in watersheds where production mine densities were at least 0.2 mines/km2 (in a 500-m stream buffer) were significantly higher than the concentrations found at reference sites. Many of these metal concentrations exceeded Ambient Water Quality Criteria (AWQC) and the Canadian Probable Effect Level guidelines for streambed sediment. Regression analysis identified significant relationships between the production mine densities and the sum of Cd, Pb, and Zn concentrations in water and streambed sediment (r2 = 0.69 and 0.66, respectively; P < 0.01). Zinc was identified as the primary metal contaminant in both water and streambed sediment. Eighteen fish species in the families Salmonidae, Cottidae, Cyprinidae, Catostomidae, Centrarchidae, and Ictaluridae were collected. Principal components analysis of 11 fish metrics identified two distinct groups of sites corresponding to the reference and test sites, predominantly on the basis of the inverse relationship between percent cottids and percent salmonids (r = -0.64; P < 0.05). Streams located downstream from the areas of intensive hard-rock mining in the Coeur d'Alene River basin contained fewer native fish and lower abundances as a result of metal enrichment, not physical habitat degradation. Typically, salmonids were the predominant species at test sites where Zn concentrations exceeded the acute AWQC. Cottids were absent at these sites, which suggests that they are more severely affected by elevated metals than are salmonids.

Natural disturbance shapes benthic intertidal macroinvertebrate communities of high latitude river deltas

USGS Publications Warehouse

Churchwell, Roy T.; Kendall, Steve J.; Blanchard, Amy L.; Dunton, Kenneth H.; Powell, Abby N.

2016-01-01

Unlike lower latitude coastlines, the estuarine nearshore zones of the Alaskan Beaufort Sea are icebound and frozen up to 9 months annually. This annual freezing event represents a dramatic physical disturbance to fauna living within intertidal sediments. The main objectives of this study were to describe the benthic communities of Beaufort Sea deltas, including temporal changes and trophic structure. Understanding benthic invertebrate communities provided a baseline for concurrent research on shorebird foraging ecology at these sites. We found that despite continuous year-to-year episodes of annual freezing, these estuarine deltas are populated by a range of invertebrates that represent both marine and freshwater assemblages. Freshwater organisms like Diptera and Oligochaeta not only survive this extreme event, but a marine invasion of infaunal organisms such as Amphipoda and Polychaeta rapidly recolonizes the delta mudflats following ice ablation. These delta sediments of sand, silt, and clay are fine in structure compared to sediments of other Beaufort Sea coastal intertidal habitats. The relatively depauperate invertebrate community that ultimately develops is composed of marine and freshwater benthic invertebrates. The composition of the infauna also reflects two strategies that make life on Beaufort Sea deltas possible: a migration of marine organisms from deeper lagoons to the intertidal and freshwater biota that survive the 9-month ice-covered period in frozen sediments. Stable isotopic analyses reveal that both infaunal assemblages assimilate marine and terrestrial sources of organic carbon. These results provide some of the first quantitative information on the infaunal food resources of shallow arctic estuarine systems and the long-term persistence of these invertebrate assemblages. Our data help explain the presence of large numbers of shorebirds in these habitats during the brief summer open-water period and their trophic importance to migrating waterfowl and nearshore populations of estuarine fishes that are the basis of subsistence lifestyles by native inhabitants of the Beaufort Sea coast.

Holocene sea-level changes in King George Island, West Antarctica, by virtue of geomorphological coastal evidences and diatom assemblages of sediment sections.

NASA Astrophysics Data System (ADS)

Poleshchuk, Ksenia; Verkulich, Sergey; Pushina, Zina; Jozhikov, Ilya

2015-04-01

A new curve of relative sea-level change is presented for the Fildes peninsula, King George Island, West Antarctic. This work is based on renewed paleogeography data, including coastal geomorphological evidence, diatom assemblages of lakes bottom sediments and radiocarbon datings of organics. The new data were obtained in several sections of quaternary sediments and groups of terraces, and allows us to expand and improve relevant conception about relative sea level changes in the King George Island region. The new radiocarbon datings of organics (mosses and shells) allows reconstructing Holocene conditions that maintain and cause the sea-level changes. Sea diatom assemblages of Dlinnoye lake bottom sediment core (that complies period about 8000 years B.P.) mark altitude of marine water penetrated into the lake. The altitudes of shell remains, which have certain life habits and expect specific salinity and depth conditions, coupled with their absolute datings, indicate the probable elevation of the past sea level. The Mid-Holocene marine transgression reached its maximum level of 18-20 m by 5760 years B.P. The transgression influenced the deglaciation of the Fildes peninsula and environment conditions integrally. The ratio of glacio-isostatic adjustment velocity and Holocene transgression leaded to the decrease of relative sea level during the Late Holocene excluding the short period of rising between 2000 and 1300 years B.P. Comparing this data with the curve for Bunger oasis, East Antarctica, introduced earlier gives an interesting result. Despite the maximum altitudes of relative sea-level rise in King George region were higher and occurred later than in Bunger oasis region, the short-term period of Late Holocene sea-level rising contemporizes. Besides that, this work allow to realize a correlation between regions of Antarctica and adjacent territory. That, in turn, lets answer the question of tectonic and eustatic factors ratio and their contribution to the Holocene transgression in different regions.

Determinism in fish assemblages of floodplain lakes of the vastly disturbed Mississippi Alluvial Valley

USGS Publications Warehouse

Miranda, L.E.; Lucas, G.M.

2004-01-01

The Mississippi Alluvial Valley between southern Illinois and southern Louisiana contains hundreds of floodplain lakes, most of which have been adversely affected by landscape modifications used to control flooding and support agriculture. We examined fish assemblages in lakes of this region to determine whether deterministic patterns developed in relation to prominent abiotic lake characteristics and to explore whether relevant abiotic factors could be linked to specific assemblage structuring mechanisms. The distributions of 14 taxa in 29 lakes were governed primarily by two gradients that contrasted assemblages in terms of lake area, lake elongation, and water clarity. The knowledge of whether a lake was clear or turbid, large or small, and long or short helped determine fish assemblage characteristics. Abiotic factors influenced fish assemblage structures, plausibly through limitations on foraging and physiological tolerances. Determinism in assemblage organization of floodplain lakes relative to recurrence in physicochemical features has been documented for unaltered rivers. Whereas the Mississippi Alluvial Valley has been subjected to vast anthropogenic disturbances and is not a fully functional floodplain river, fish assemblages in its floodplain lakes remain deterministic and organized by the underlying factors that also dictate assemblages in unaltered rivers. In advanced stages of lake aging, fish assemblages in these lakes are expected to largely include species that thrive in turbid, shallow systems with few predators and low oxygen concentrations. The observed patterns related to physical characteristics of these lakes suggest three general conservation foci, including (1) watershed management to control erosion, (2) removal of sediments or increases in water level to alleviate depth reductions and derived detriments to water physicochemistry, and (3) management of fish populations through stockings, removals, and harvest regulations.

U.S. Geological Survey Quality-Assurance Project for Sediment Analysis

USGS Publications Warehouse

Gordon, John D.; Newland, Carla

2000-01-01

Introduction Sediment is derived primarily from natural weathering of rock and is an assemblage of individual mineral grains that are then deposited by some physical agent, such as water, wind, ice, or gravity (Fetter, 1988). The U.S. Geological Survey (USGS) samples sediments and collects data on the amount of sediment in selected waterways. The most pressing sediment-related problems are associated with environmental questions, such as the transport and fate of attached pollutants, effects of sediment on aquatic biota and their habitats, and effects on sediment transport from land-use changes. Current (2000) sediment issues require that sediment studies address multiple objectives in water-resources management (Koltun and others, 1997). To support sediment research, the USGS operates laboratories for the analysis of the physical characteristics of sediment. Sediment laboratories producing data for the USGS have two principal functions: (1) the determination of suspended-sediment concentration in samples and (2) the determination of sand/fine separations. The reliability of these determinations and the usefulness of the data are dependent on the accuracy and reliability of the laboratory analyses (Guy, 1969).

Microplastics Affect the Ecological Functioning of an Important Biogenic Habitat.

PubMed

Green, Dannielle Senga; Boots, Bas; O'Connor, Nessa E; Thompson, Richard

2017-01-03

Biological effects of microplastics on the health of bivalves have been demonstrated elsewhere, but ecological impacts on the biodiversity and ecosystem functioning of bivalve-dominated habitats are unknown. Thus, we exposed intact sediment cores containing European flat oysters (Ostrea edulis) or blue mussels (Mytilus edulis) in seawater to two different densities (2.5 or 25 μg L -1 ) of biodegradable or conventional microplastics in outdoor mesocosms. We hypothesized that filtration rates of the bivalves, inorganic nitrogen cycling, primary productivity of sediment dwelling microphytobenthos, and the structure of invertebrate benthic assemblages would be influenced by microplastics. After 50 days, filtration by M. edulis was significantly less when exposed to 25 μg L -1 of either type of microplastics, but there were no effects on ecosystem functioning or the associated invertebrate assemblages. Contrastingly, filtration by O. edulis significantly increased when exposed to 2.5 or 25 μg L -1 of microplastics, and porewater ammonium and biomass of benthic cyanobacteria decreased. Additionally the associated infaunal invertebrate assemblages differed, with significantly less polychaetes and more oligochaetes in treatments exposed to microplastics. These findings highlight the potential of microplastics to impact the functioning and structure of sedimentary habitats and show that such effects may depend on the dominant bivalve present.

Environmental Quality Assessment of Bizerte Lagoon (Tunisia) Using Living Foraminifera Assemblages and a Multiproxy Approach.

PubMed

Alves Martins, Maria Virgínia; Zaaboub, Noureddine; Aleya, Lotfi; Frontalini, Fabrizio; Pereira, Egberto; Miranda, Paulo; Mane, Miguel; Rocha, Fernando; Laut, Lazaro; El Bour, Monia

2015-01-01

This study investigated the environmental quality of the Bizerte Lagoon (Tunisia) through an integrated approach that combined environmental, biogeochemical, and living benthic foraminiferal analyses. Specifically, we analyzed the physicochemical parameters of the water and sediment. The textural, mineralogical, and geochemical characteristics of the sediment, including total organic carbon, total nitrogen, simultaneously extracted metals (SEM), acid volatile sulfides (AVS), chlorophyll a, CaCO3, and changes in bacterial populations and carbon isotopes were measured. The SEM/AVS values indicated the presence of relatively high concentrations of toxic metals in only some areas. Foraminiferal assemblages were dominated by species such as A. parkinsoniana (20-91%), Bolivina striatula (<40%), Hopkinsina atlantica (<17%), and Bolivina ordinaria (<15%) that cannot be considered typical of impacted coastal lagoons both in Mediterranean and northeast Atlantic regions. The results of this work suggest that Bizerte Lagoon is a unique setting. This lagoon is populated by typical marine species that invaded this ecosystem, attracted not only by the prevailing favorable environmental conditions but also by the abundance and quality of food. The results indicate that the metal pollution found in some areas have a negative impact on the assemblages of foraminifera. At present, however, this negative impact is not highly alarming.

Environmental Quality Assessment of Bizerte Lagoon (Tunisia) Using Living Foraminifera Assemblages and a Multiproxy Approach

PubMed Central

Alves Martins, Maria Virgínia; Zaaboub, Noureddine; Aleya, Lotfi; Frontalini, Fabrizio; Pereira, Egberto; Miranda, Paulo; Mane, Miguel; Rocha, Fernando; Laut, Lazaro; El Bour, Monia

2015-01-01

This study investigated the environmental quality of the Bizerte Lagoon (Tunisia) through an integrated approach that combined environmental, biogeochemical, and living benthic foraminiferal analyses. Specifically, we analyzed the physicochemical parameters of the water and sediment. The textural, mineralogical, and geochemical characteristics of the sediment, including total organic carbon, total nitrogen, simultaneously extracted metals (SEM), acid volatile sulfides (AVS), chlorophyll a, CaCO3, and changes in bacterial populations and carbon isotopes were measured. The SEM/AVS values indicated the presence of relatively high concentrations of toxic metals in only some areas. Foraminiferal assemblages were dominated by species such as A. parkinsoniana (20–91%), Bolivina striatula (<40%), Hopkinsina atlantica (<17%), and Bolivina ordinaria (<15%) that cannot be considered typical of impacted coastal lagoons both in Mediterranean and northeast Atlantic regions. The results of this work suggest that Bizerte Lagoon is a unique setting. This lagoon is populated by typical marine species that invaded this ecosystem, attracted not only by the prevailing favorable environmental conditions but also by the abundance and quality of food. The results indicate that the metal pollution found in some areas have a negative impact on the assemblages of foraminifera. At present, however, this negative impact is not highly alarming. PMID:26372655

Extreme diagenesis displayed by Pliocene-Pleistocene Calcareous Nannofossils in IODP Hole 1396A, adjacent to Montserrat Island in the Lesser Antilles

NASA Astrophysics Data System (ADS)

Aljahdali, M. H.; Behzad, A.; Missimer, T. M.; Wise, S. W.; Scientists, E.

2013-12-01

Adjacent to Montserrat Island in the Lesser Antilles of the Caribbean Sea, Integrated Ocean Drilling Program (IODP) Site 1396 recovered lower Pliocene to Pleistocene calcareous nannofossil assemblages (CN11 to CN15) that range between common to abundant and display a variety of preservations. High-resolution Scanning Electron Microscopy (SEM) observation of calcareous nannofossil assemblages in selected samples from Hole 1396A, shows severe diagenesis (overgrowth and/or dissolution) even near the top of the sequence. The nannofossil assemblages in this relatively shallow basin (e.g., 800 m) reveal abnormal diagenesis for such young specimens that are quite similar to the heavy overgrowths and dissolution generally seen only in older deposits (e.g., Cretaceous). Our hypothesis is that volcanic activity in the region probably induced this extreme diagenesis. A more detailed examination of these samples should provide a better understanding of the progression of carbonate diagenesis in this basin. The nannofossil biostratigraphy and magnetostratigraphy at Site 1396 also suggest lower sedimentation rates in the Pleistocene than in the Pliocene. A comparison site (ODP Leg 165 Site 1000) in the Caribbean Sea also shows a similar sedimentation-rate pattern. This we interpret as a regional event caused by the closure of the Central American Seaway.

Environmental forcing on the flux of organic-walled dinoflagellate cysts in recent sediments from a subtropical lagoon in the Gulf of California.

PubMed

Cuellar-Martinez, Tomasa; Alonso-Rodríguez, Rosalba; Ruiz-Fernández, Ana Carolina; de Vernal, Anne; Morquecho, Lourdes; Limoges, Audrey; Henry, Maryse; Sanchez-Cabeza, Joan-Albert

2018-04-15

To evaluate the relationship of changes in organic-walled dinoflagellate cyst (dinocyst) fluxes to sediments with environmental variables (air and sea surface temperatures, El Niño conditions, rainfall, and terrigenous index), cyst assemblages were analyzed in a 210 Pb-dated sediment core (~100years) from the pristine San José Lagoon (San José Island, SW Gulf of California). The dinocyst abundance ranged from 3784 to 25,108cystsg -1 and fluxes were of the order of 10 3 -10 4 cystscm -2 yr -1 . Lingulodinium machaerophorum, Polysphaeridium zoharyi and Spiniferites taxa accounted for 96% of the total dinocyst assemblages, and the abundances of these species increased towards the core surface. P. zoharyi fluxes increased from about 1965 onwards. Redundancy analyses, showed that mean minimum air temperature and terrigenous index were the key factors governing dinocyst fluxes. In this study, dinocyst fluxes of dominant taxa had responded to changes in climate-dependent environmental variables during the past ~20years; this may also be the case in other subtropical coastal lagoons. Copyright © 2017 Elsevier B.V. All rights reserved.

Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia.

PubMed

Duran, Robert; Bielen, Ana; Paradžik, Tina; Gassie, Claire; Pustijanac, Emina; Cagnon, Christine; Hamer, Bojan; Vujaklija, Dušica

2015-10-01

The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a "core" Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems.

Lake shoreline and littoral physical habitat structure in a national lakes assessment

EPA Science Inventory

Riparian and littoral habitat components are important to lake biological assemblages, providing refuge from predation, living and egg-laying substrates, and food. Shoreline structure also affects nutrient cycling, littoral production, and sedimentation rates. Measures of ripar...

Unusual algal turfs associated with the rhodophyta Phyllophora crispa: Benthic assemblages along a depth gradient in the Central Mediterranean Sea

NASA Astrophysics Data System (ADS)

Bonifazi, Andrea; Ventura, Daniele; Gravina, Maria Flavia; Lasinio, Giovanna Jona; Belluscio, Andrea; Ardizzone, Gian Domenico

2017-02-01

Macroalgal assemblages dominated by the turf-forming alga Phyllophora crispa are described in detail for the first time in the Central Mediterranean Sea. This particular form of algal growth, which comprises an upper mixed layer of multiple algal species with a basal stratum formed by entangled thalli of P. crispa, was observed for the first time in 2012 along the promontory of Punta del Lazzaretto (Giglio Island, Italy). In this study, this assemblage was analysed to document the diversity of macroalgae and invertebrate associated communities and assess their distribution along a depth gradient. The algae forming turfs grow directly on the rock at low depth up to 10-15 m depth, while they grow above P. crispa from 15 m to 35 m depth, resulting in luxuriant beds covering up to 100% of the substrate. Multivariate analysis revealed clear differences regarding algae and invertebrate species richness and abundance between shallow and deep strata because of the dominance of Phyllophora crispa at depths greater than 20 m. The long laminal thalli of P. crispa favoured sessile fauna colonization, while the vagile species were principally linked to the architectural complexity of the turf layer created by the P. crispa, which increased the microhabitat diversity and favoured sediment deposition within the turf layer. The complex structures of these turf assemblages and their widespread distribution along the whole coast of the island suggest a well-established condition of the communities linked to the high natural sedimentation rate observed in the area.

Foraminiferal assemblages from a transitional tropical upwelling zone in the Golfe d'Arguin, Mauritania

NASA Astrophysics Data System (ADS)

Reymond, Claire E.; Mateu-Vicens, Guillem; Westphal, Hildegard

2014-07-01

With the growing pressure of eutrophication in tropical regions, the Mauritian shelf provides a natural situation to understand the variability in mesotrophic assemblages. Site-specific dynamics occur throughout the 1200 m depth gradient. The shallow assemblages divide into three types of warm-water mesotrophic foraminiferal assemblages, which is not only a consequence of high primary productivity restricting light to the benthos but due to low pore water oxygenation, shelf geomorphology, and sediment partitioning. In the intermediate depth (approx. 500 m), the increase in foraminiferal diversity is due to the cold-water coral habitat providing a greater range of micro niches. Planktonic species characterise the lower bathyal zone, which emphasizes the reduced benthic carbonate production at depth. Although, due to the strong hydrodynamics within the Golf, planktonic species occur in notable abundances through out the whole depth gradient. Overall, this study can easily be compared to other tropical marine settings investigating the long-term effects of tropical eutrophication and the biogeographic distribution of carbonate producing organisms.

Effects of cyclone-generated disturbance on a tropical reef foraminifera assemblage.

PubMed

Strotz, Luke C; Mamo, Briony L; Dominey-Howes, Dale

2016-04-29

The sedimentary record, and associated micropalaeontological proxies, is one tool that has been employed to quantify a region's tropical cyclone history. Doing so has largely relied on the identification of allochthonous deposits (sediments and microfossils), sourced from deeper water and entrained by tropical cyclone waves and currents, in a shallow-water or terrestrial setting. In this study, we examine microfossil assemblages before and after a known tropical cyclone event (Cyclone Hamish) with the aim to better resolve the characteristics of this known signal. Our results identify no allochthonous material associated with Cyclone Hamish. Instead, using a swathe of statistical tools typical of ecological studies but rarely employed in the geosciences, we identify new, previously unidentified, signal types. These signals include a homogenising effect, with the level of differentiation between sample sites greatly reduced immediately following Cyclone Hamish, and discernible shifts in assemblage diversity. In the subsequent years following Hamish, the surface assemblage returns to its pre-cyclone form, but results imply that it is unlikely the community ever reaches steady state.

Biomonitoring in the Boulder River watershed, Montana, USA: metal concentrations in biofilm and macroinvertebrates, and relations with macroinvertebrate assemblage

USGS Publications Warehouse

Rhea, D.T.; Harper, D.D.; Farag, A.M.; Brumbaugh, W.G.

2006-01-01

Portions of the Boulder River watershed contain elevated concentrations of arsenic, cadmium, copper, lead, and zinc in water, sediment, and biota. We measured concentrations of As, Cd, Cu, Pb, and Zn in biofilm and macroinvertebrates, and assessed macroinvertebrate assemblage and aquatic habitat with the objective of monitoring planned remediation efforts. Concentrations of metals were generally higher in downstream sites compared with upstream or reference sites, and two sites contained metal concentrations in macroinvertebrates greater than values reported to reduce health and survival of resident trout. Macroinvertebrate assemblage was correlated with metal concentrations in biofilm and macroinvertebrates. However, macroinvertebrate metrics were significantly correlated with a greater number of biofilm metals (8) than metals in invertebrates (4). Lead concentrations in biofilm appeared to have the most significant impact on macroinvertebrate assemblage. Metal concentrations in macroinvertebrates were directly proportional to concentrations in biofilm, indicating biofilm as a potential surrogate for monitoring metal impacts in aquatic systems. ?? Springer Science+Business Media, Inc. 2006.

The promiscuous larvae: flexibility in the establishment of symbiosis in corals

NASA Astrophysics Data System (ADS)

Cumbo, V. R.; Baird, A. H.; van Oppen, M. J. H.

2013-03-01

Coral reefs thrive in part because of the symbiotic partnership between corals and Symbiodinium. While this partnership is one of the keys to the success of coral reef ecosystems, surprisingly little is known about many aspects of coral symbiosis, in particular the establishment and development of symbiosis in host species that acquire symbionts anew in each generation. More specifically, the point at which symbiosis is established (i.e., larva vs. juvenile) remains uncertain, as does the source of free-living Symbiodinium in the environment. In addition, the capacity of host and symbiont to form novel combinations is unknown. To explore patterns of initial association between host and symbiont, larvae of two species of Acropora were exposed to sediment collected from three locations on the Great Barrier Reef. A high proportion of larvae established symbiosis shortly after contact with sediments, and Acropora larvae were promiscuous, taking up multiple types of Symbiodinium. The Symbiodinium types acquired from the sediments reflected the symbiont assemblage within a wide range of cnidarian hosts at each of the three sites, suggesting potential regional differences in the free-living Symbiodinium assemblage. Coral larvae clearly have the capacity to take up Symbiodinium prior to settlement, and sediment is a likely source. Promiscuous larvae allow species to associate with Symbiodinium appropriate for potentially novel environments that may be experienced following dispersal.

Microbial Activity and Depositional System Dynamics: Linking Scales With The Aid of New Technology

NASA Astrophysics Data System (ADS)

Defew, E. C.; Hagerthey, S. E.; Honeywill, C.; Perkins, R. G.; Black, K. S.; Paterson, D. M.

The dynamics of estuarine depositional systems are influenced by sediment-dwelling microphytobenthic assemblages. These assemblages produce extracellular polymeric substances (EPS), which are known to be important in the process of sediment biosta- bilisation. However, these communities are generally studied on very small spatial scales making the prediction of primary productivity and their importance in terms of sediment stability over large areas uncertain. Recent advances in our knowledge of the biostabilisation process have allowed the establishment of links between EPS produc- tion, spatial distribution of algal biomass and their primary productivity over much larger spatial scales. For example, during the multidisciplinary BIOPTIS project, re- mote sensing (RS) was combined with ground-truthing measurements of physical and biological parameters to produce synoptic maps leading to a better understanding of system dynamics and the potential effects of environmental perturbations such as cli- mate change. Recent work using low-temperature scanning electron microscopy (LT- SEM) and in-line laser holography has measured the influence of EPS on the erosional behaviour of sediment flocs and particles and has shown that an increase in the con- centration of EPS determines the nature of the eroded floc material and the critical threshold for sediment erosion. This provides the mechanistic link required between EPS concentration and sediment stability. Whilst it is not yet possible to discern EPS concentration directly by RS studies, we know that EPS concentrations in sediments co-vary with chlorophyll a content, and are closely related to algal productivity. There- fore, RS studies which provide large-scale spatial information of chlorophyll a distri- bution may be used to model the stability and productivity of intertidal depositional systems. This paper introduces the basis of these linkages from the cellular level (in situ chlorophyll fluorescence), the ground-truthing approach (sediment stability, struc- ture, pigment distribution, in situ chlorophyll fluorescence) and investigates the poten- tial of a RS approach in a case study of a Scottish Estuary.

Soft-sediment deformation structures from an ice-marginal storm-tide interactive system, Permo-Carboniferous Talchir Formation, Talchir Coalbasin, India

NASA Astrophysics Data System (ADS)

Bhattacharya, H. N.; Bhattacharya, Biplab

2010-01-01

Permo-Carboniferous Talchir Formation, Talchir Coalbasin, India, records sedimentation during a phase of climatic amelioration in an ice-marginal storm-affected shelf. Evidences of subtidal processes are preserved only under thick mud drapes deposited during waning storm phases. Various soft-sediment deformation structures in some sandstone/siltstone-mudstone interbeds, like syn-sedimentary faults, deformed laminations, sand-silt flows, convolute laminations and various flame structures, suggest liquefaction and fluidization of the beds due to passage of syn-depositional seismic shocks. In the Late Paleozoic ice-marginal shelf, such earthquake tremors could be generated by crustal movements in response to glacioisostatic adjustments of the basin floor.

Lacustrine records of continental climate in northwest Greenland through the Holocene and Last Interglacial

NASA Astrophysics Data System (ADS)

McFarlin, J. M.; Axford, Y.; Osburn, M. R.; Lasher, G. E.; Francis, D. R.; Kelly, M. A.; Osterberg, E. C.

2015-12-01

Lake sediment records provide opportunities for high-resolution observations of paleoclimate that help to place modern climate change in geologic context. Here we present a terrestrial record of July air temperature for northwest Greenland (Nunatarssuaq, ~25 km east of the Thule Air Base) through the Holocene and a prior warm period, inferred from subfossil insect remains (Chironomidae) preserved in lacustrine sediments. In addition, we discuss ongoing work in characterizing the sources and isotopic composition of leaf waxes preserved in the same sediments. Multiple parallel sediment cores were collected in the summers of 2012 and 2014 from Wax Lips Lake (informal name), a non-glacial lake situated <2 km from the current margin of the Greenland Ice Sheet. Radiocarbon ages were obtained on aquatic mosses from intact laminae, and indicate that the record spans the Holocene, beginning at ~10.4 ka, as well as an interval beyond the range of 14C (>44 ka) and thus predates the Last Glacial Maximum (LGM). Our results demonstrate temperatures warmer than present through the early and mid Holocene followed by cooling in the late Holocene. Material that pre-dates the LGM contains insect assemblages indicating temperatures warmer than the warmest millennia of the Holocene. We interpret this material as most likely dating to the Last Interglacial Period (MIS 5). Along with assemblages of Chironomidae, we find subfossil Chaoboridae in one section of the pre-LGM sediments, suggesting exceptionally warm conditions based upon the distribution of modern-day Chaoborus. We find abundant n-alkanes and n-acids are preserved in the Holocene and pre-LGM sediments, allowing for complementary compound-specific δD analyses and identification of organic matter source in addition to chironomid derived temperature records.

Recognising Paleoseismic Events and Slip Styles in Vein Microstructures - is Incrementality Enough?

NASA Astrophysics Data System (ADS)

Fagereng, A.; Sibson, R. H.

2008-12-01

'Subduction channels', containing highly sheared, fluid-saturated, trench-fill sediments, are commonly present along subduction thrust interfaces. These shear zones accommodate fast plate boundary slip rates (1~-~10~cm/yr) and exhibit high levels of seismicity, accomplishing slip in a broad range of styles including standard earthquakes, slow slip, non-volcanic tremor and aseismic creep. Exhumed subduction channel fault rocks provide a time-integrated record of these varied slip modes though the degree of overprinting may be considerable. The Chrystalls Beach accretionary mélange, within the Otago Schist accretion-collision assemblage, New Zealand, is analogous to an active subduction channel assemblage. It contains asymmetric lenses of sandstone, chert and minor basalt enclosed within a relatively incompetent, cleaved pelitic matrix. This assemblage has been intensely sheared in a mixed continuous/discontinuous style within a flat-lying, <~4~km thick, shear zone. Ductile structures such as folds, S/C-like structures, and asymmetric boudins and clasts formed by soft sediment deformation and pressure solution creep. An extensive anastomosing vein system can be divided into mutually cross-cutting extension fractures (V1) and slickenfibre shear veins (V2). V1 commonly cut competent lenses within the mélange, while V2 mostly follow lithological contacts. Both vein sets are predominantly elongate-blocky with 'crack-seal' extension and shear increments of 10~- ~100~μm. Little sign of wall rock alteration or heating is present adjacent to V1 veins, which likely formed by incremental hydrofracture with episodic fluid influx. Post-fracture drop in Pf promoted solute precipitation from advecting fluids. This process may reflect fracture and fluid flow in a distributed fault-fracture mesh, an often inferred mechanism of non-volcanic tremor. In contrast, wall rock alteration and pressure solution seams are common adjacent to V2 veins. Slickenfibres on these shear surfaces likely formed by relatively slow dissolution and precipitation of wall rock material, which may translate to a slip mode of rise-time intermediate between earthquakes (seconds - minutes) and aseismic creep (years - infinite). Fibres are typically ≤ 10 cm long, similar to slip observed in slow slip events (rise-time weeks - months). We propose that these veins are possible records of slow slip along weak, fluid-saturated and highly overpressured planes. No definite record of large, fast earthquakes is observed in the complex, either because the rocks never experienced such events, or because significant shear heating was inhibited by thermal pressurisation. The only record of fast events would be discrete planes of cataclasite, easily overprinted by slow interseismic material diffusion. The mélange is a record of episodic, distributed deformation over a range of time- and length-scales, which may reflect distributed seismic activity accommodated by a range of slip modes including episodic tremor and slow slip.

Non-seagrass meadow sedimentary facies of the Pontinian Islands, Tyrrhenian Sea: A modern example of mixed carbonate siliciclastic sedimentation

NASA Astrophysics Data System (ADS)

Brandano, Marco; Civitelli, Giacomo

2007-10-01

The soft bottom of the Mediterranean continental shelf is characterized by a heterozoan skeletal assemblage ( sensu [James, N.P., 1997. The cool-water carbonate depositional realm. In: James, N.P., Clarke, J. (Eds), Cool-water Carbonates. Spec. Publ. Soc. Sediment. Geol., vol. 56, pp.1-20.]). Although the contemporary presence of terrigenous and skeletal carbonate sediments has been well established [Tortora, P., 1996. Depositional and erosional coastal processes during the last postglacial sea-level rise: an example from the Central Tyrrhenian continental shelf (Italy). J. Sed. Res. 66, 391-405.; Fornós, J.J., Ahr, W.M., 1997. Temperate carbonates on a modern, low-energy, isolated ramp: the Balearic Platform, Spain. Journal of Sedimentary Research , 67, 364-373.; Fornós, J.J., Ahr, W.M., 2006. Present-day temperate carbonate sedimentation on the Balearic Platform, western Mediterranean: compositional and textural variation along a low-energy isolated ramp. In: Pedley, H.M., Carannante, G. (Eds.) 2006, Cool-water Carbonates: Depositional Systems and Palaeoenvironmental Controls. Geological Society, London, Special Publications, 255, pp. 121-135], the interactions between carbonate and terrigenous-siliciclastic sedimentation has not been documented well enough. A total of 33 surface sediment samples from the Pontinian shelf (Tyrrhenian Sea, central Mediterranean) have been analysed. Sampling stations range from 15 to 250 mwd (meter water depth) and are located along five transects (PonzaW, PonzaNW, Ponza NE, Ponza E, Zannone), plus four samples collected around Palmarola Island. Sectors colonized by seagrass meadows have not been sampled. A total of 6 sedimentary facies (F) and 10 microfacies (mf) have been recognized by using component analyses, grain size percentage, sorting, carbonate content and authigenic mineralization rate. These facies and microfacies represent the Pontian Islands shelf sedimentation, in the interval between the upper infralittoral and the epibathyal zones that represent shelf-break and upper slope sedimentation. The Maerl facies (F4a,b; mf4a,b) and the skeletal sands (F2a,b; mf2a1, mf2a2, mf2b) fall within the circalittoral zone. The circalittoral zone in the water depth interval between 82 m and 112 m display relict facies (F6, mf6). Finally facies F5 (Siliciclastic sands) includes subfacies F5b (mf5b), located in the circalittoral zone at depths of 49 to 101 mwd and restricted to the western and eastern sectors of Ponza, and subfacies F5a in the upper infralittoral zone (15 mwd/25 mwd) where erosional processes prevail. Carbonate content analyses indicate that maximum carbonate production on the Pontinian shelf took place in the 60-80 mwd interval. Facies F4 (Maerl) represents the environment characterized by the highest carbonate production rates. In the Pontian area siliciclastic-carbonate mixing took place in the infralittoral zone and in the lower circalittoral zone. In the infralittoral zone erosional processes on the rocky shoreline produced lithoclasts and vulcanoclastic deposits that were reworked by wave-induced near-shore currents. In the lower circalittoral zone the prolific production by photic biota (red algae) ends, while skeletal remains of the aphotic environment mixes with planktonic sediments characterized by low carbonate values. Sand (63 μm-2 mm) is the dominant grain size class, however gravel-dominated facies (F4 Maerl) are present in water depths (50 to 112 mwd) which are significantly below the storm wave base. Glauconite mineralization appears on the Pontinian shelf from 50 mwd and increases in abundance along the deeper bathymetries. The compositional characteristics of relict facies F6 shows the concurrence of biota assemblages of the infralittoral and circalittoral zones, likely representing the record of the last Holocene transgressive event (18 ky) and expressed by the overlapping of components of different environments.

Characterization of microbial populations across geochemical and lithological boundaries in urban lake sediments under environmental change in Minneapolis-St. Paul

NASA Astrophysics Data System (ADS)

Gilbertson, M.; Harrison, B. K.; Flood, B. E.; Myrbo, A.; Bailey, J. V.

2013-12-01

The characterization of microbial communities within urban lake sediments may offer a promising method to observe changes in lake geochemistry due to human impact. By mapping the abundances and diversity of microorganisms through the uppermost meter of sediment in three distinctive Minneapolis-St. Paul lakes (Brownie Lake and Twin Lake, both meromictic, and oligomictic Lake McCarrons) using 16S rRNA characterization, our aim was to observe changes in microbial populations across steep geochemical and lithological gradients. Lake McCarrons underwent a process of eutrophication and a shift to bottom water anoxia beginning around 1910 due mostly to agricultural run-off. This shift greatly increased the preservation potential of seasonal sedimentation and finely laminated varve accumulation. The onset of meromixis in Brownie Lake in ~1915 is abrupt and has been attributed to a sudden drop in water level. Twin Lake is perennially meromictic due to the topography of the watershed. The three lakes were sampled by collecting freeze cores in July, 2012 (McCarrons, Brownie) and February, 2013 (Twin) at the deepest locations beneath anoxic to hypoxic bottom waters. The cores were then subsampled with high resolution techniques at places of interest: within individual lamina, across mass flow deposits, and near the onset of laminae preservation (beginning of oxygen-depleted bottom waters). Terminal Restriction Fragment Length Polymorphism (T-RFLP) allows for comparison of the microbial assemblages throughout the sediment columns of each lake and from lake to lake, with a focus on the horizons mentioned previously. The microbial assemblages present in specific horizons are often introduced via sedimentation and are partially derived from community composition at the time of sedimentation. T-RFLP analyses are complemented by mineralogical and lithological descriptions. The lakes have each been subject to their own set of variables and inputs. Brownie Lake contains high levels of Fe and Mn (measured up to 78 and 6 mg/l in bottom waters, respectively, US EPA STORET). The ecology of McCarrons has been greatly disturbed most recently when the lake was targeted by a 2004 aluminum sulfate treatment to counteract high phosphorous levels. Twin Lake has mass flow deposits nearly 5 cm thick, similar to turbidites, likely caused by increased sedimentation from large housing developments on the lake shores. The microbial community in each of the lakes is impacted by these distinct parameters. This study examines variability in microbial community assemblages through time and space within these lake sediments. Changes seen in the ecology of the communities are related to changes in chemical and physical parameters, namely, shifts in lithology and sediment accumulation via the onset of meromixis. Freeze coring exceptionally allows super-high resolution subsampling techniques to identify differences across geochemical gradients and between individual seasonal laminae within each lake and from lake to lake.

Calcareous assemblages of the southeastern Mediterranean low-tide estuaries - Seasonal dynamics and paleo-environmental implications

NASA Astrophysics Data System (ADS)

Avnaim-Katav, Simona; Agnon, Amotz; Sivan, Dorit; Almogi-Labin, Ahuva

2016-02-01

The study of estuarine ecosystems is essential for protecting and reestablishing their threatened biota. In this research the spatio-temporal variations in the distribution patterns of foraminifera, ostracods and molluscs are analyzed in surficial sediments sampled in 2012/13 at six low-tide estuaries of the southeastern Mediterranean coast. Live assemblages are studied using multivariate statistical analyses to determine their ecological preferences and seasonal dynamics whereas the dead assemblages are used to establish a reference baseline for future paleoenvironmental reconstruction. The statistical analysis indicates that salinity, TOC and % carbonate are the main environmental factors explaining 60% of the cumulative variance and controlling the distribution pattern of the different brackish taxa encountered in these estuaries. The foraminifera Ammonia tepida and some miliolids (Quinqueloculina and Varidentella) inhabit most estuaries during summer when salinities of 13-18 psu and temperatures of 26-34 °C occur. At the Naaman stream the agglutinated species Birsteiniolla macrostoma and Trichohyalus aguayoi dominate the assemblage during autumn and winter, respectively when salinities of 3-7 psu and temperature of 18-24 °C prevail. High abundance of the monospecific assemblage of the ostracod Cyprideis torosa was encountered at the Tanninim year round in oligohaline water. The gastropod Heleobia phaeniciaca prefers living at the Naaman and Tanninim streams while Pyrgophorus sp., an invasive and low salinity species, continue colonizing more stream reaches along the Israeli coast. The dead assemblages are composed of high numbers of local and transported species. It includes post storm-surge sediments containing high numbers of inland fresh and brackish water species transported by the floods. Those are mixed with inner to mid-shelf benthic and planktonic foraminifera, ostracods and molluscs. Transportation of the marine organisms a few hundred of meters inland via the estuaries indicates that the coastal areas are prone to storm surge events that are preserved clearly on the coast. The present study demonstrates that the combined use of different multi-proxy faunal records enhances significantly the understanding of the dynamics of low-tide estuaries. This can be applied also to other low-tide estuaries worldwide and facilitate better management of these threatened environments. Additionally, it enables understanding of the post-mortem processes that control the transition from the living to the death assemblages and by that improve paleoenvironmental reconstruction of the lower reaches of low-tide estuaries.

Clay mineralogy indicates the muddy sediment provenance in the estuarine-inner shelf of the East China Sea

NASA Astrophysics Data System (ADS)

Zhao, Yifei; Zou, Xinqing; Liu, Qing; Wang, Chenglong; Ge, Chendong; Xu, Min

2018-02-01

The estuarine-inner shelf mud regions of the East China Sea (ECS) are valuable for studying the source-to-sink processes of fluvial sediments deposited since the Holocene. In this study, we present evidence of the provenance and environmental evolution of two cores (S5-2 and JC07) from the estuarine-inner shelf regions of the ECS over the past 100 years based on 210Pb dating, high-resolution grain size measurements and clay mineral analyses. The results indicate that the clay mineral assemblages of cores S5-2 and JC07 are dominated by illite, followed by kaolinite and chlorite, and present scarce amounts of smectite. A comparison of these clay mineral assemblages with several major sources reveals that the fine sediments on the estuarine-inner shelf of the ECS represent a mixture of provenances associated with the Yangtze and Yellow Rivers, as well as smaller rivers. However, the contribution of each provenance has varied greatly over the past hundred years, as indicated by the down-core variability due to strong sediment reworking and transport on the inner shelf and the reduction of the sediment load from the Yangtze River basin. In the mud region of the Yangtze River estuary, the sediment from 1930 to 1956 was primarily derived from the Yangtze River, although the Yellow River was also an important influence. From 1956 to 2013, the Yellow River contribution decreased, whereas the Yangtze River contribution correspondingly increased. In the Zhe-Min mud region, the Yangtze River contributed more sediment than did other rivers from 1910 to 1950; however, the Yangtze River contribution gradually decreased from 1950 to 2013. Moreover, the other small rivers accounted for minor contributions, and the East Asian winter monsoon (EAWM) played an important role in the sediment transport process in the ECS. Our results indicate that the weakening/strengthening of the EAWM and a decrease in the sediment load of the Yangtze River influenced the transport and fate of sediment on the estuarine-inner shelf of the ECS.

Drivers of Change in a 7300-Year Holocene Diatom Record from the Hemi-Boreal Region of Ontario, Canada

PubMed Central

Beck, Kristen K.; Medeiros, Andrew S.

2016-01-01

A Holocene lake sediment record spanning the past 7300 years from Wishart Lake in the Turkey Lakes Watershed in the Hemi-Boreal of central Ontario, Canada, was used to evaluate the potential drivers of long-term change in diatom assemblages at this site. An analysis of diatom assemblages found that benthic and epiphytic taxa dominated the mid-Holocene (7300–4000 cal yr BP), indicating shallow, oligotrophic, circum-neutral conditions, with macrophytes present. A significant shift in diatom assemblages towards more planktonic species (mainly Cyclotella sensu lato, but also several species of Aulacoseira, and Tabellaria flocculosa) occurred ~4000 cal yr BP. This change likely reflects an increase in lake level, coincident with the onset of a more strongly positive moisture balance following the drier climates of the middle Holocene, established by numerous regional paleoclimate records. Pollen-inferred regional changes in vegetation around 4000 yrs BP, including an increase in Betula and other mesic taxa, may have also promoted changes in diatom assemblages through watershed processes mediated by the chemistry of runoff. A more recent significant change in limnological conditions is marked by further increases in Cyclotella sensu lato beginning in the late 19th century, synchronous with the Ambrosia pollen rise and increases in sediment bulk density, signaling regional and local land clearance at the time of Euro-Canadian settlement (1880 AD). In contrast to the mid-Holocene increase in planktonic diatoms, the modern increase in Cyclotella sensu lato likely indicates a response to land use and vegetation change, and erosion from the watershed, rather than a further increase in water level. The results from Wishart Lake illustrate the close connection between paleoclimate change, regional vegetation, watershed processes, and diatom assemblages and also provides insight into the controls on abundance of Cyclotella sensu lato, a diatom taxonomic group which has shown significant increases and complex dynamics in the post-industrial era in lakes spanning temperate to Arctic regions. PMID:27532216

Paleocene and Maastrichtian calcareous nannofossils from clasts in Pleistocene glaciomarine muds from the northern James Ross Basin, western Weddell Sea, Antarctica

USGS Publications Warehouse

Kulhanek, D.K.

2007-01-01

Site NBP0602A-9, drilled during the SHALDRIL II cruise of the RV/IB Nathaniel B. Palmer, includes two holes located in the northern James Ross Basin in the western Weddell Sea, very close to the eastern margin of the Antarctic Peninsula. Sediment from both holes consists of very dark grey, pebbly, sandy mud, grading to very dark greenish grey, pebbly, silty mud in the lower 2.5 m of the second hole. In addition to abundant pebbles found throughout the cores, both holes contain numerous sedimentary clasts. Biostratigraphic analysis of diatom assemblages from the glaciomarine muds yields rare to few, poorly preserved diatoms. The mixed assemblage consists mostly of extant species, but also includes reworked taxa that range to the Miocene. The absence of Rouxia spp., however, suggests the sediment is late Pleistocene in age. The sedimentary clasts, on the other hand, are nearly barren of diatoms, but contain rare, moderately to well-preserved calcareous nannofossils. The clasts contain three distinct assemblages. Two clasts are assigned an early Maastrichtian age based on the presence of Biscutum magnum and Nephrolithus corystus, while one clast yields a late Maastrichtian age based on the presence of Nephrolithus frequens. These samples also contain other characteristic Late Cretaceous species, including Biscutum notaculum, Cribrosphaerella daniae, Eiffellithus gorkae, Kamptnerius magnificus, and Prediscosphaera bukryi. Two samples yield an early Paleocene assemblage dominated by Hornibrookina teuriensis. The Maastrichtian assemblages are similar to those found in the López de Bertodano Formation on Seymour and Snow Hill Islands, making it the likely source area for the Cretaceous clast material. Although no calcareous nannofossils have been reported from Paleocene formations on these islands, the occurrence of calcareous foraminifers suggests other calcareous plankton may be present; thus the Paleocene clasts likely also originated from the Seymour Island area.

Dynamics of bacterial assemblages and removal of polycyclic aromatic hydrocarbons in oil-contaminated coastal marine sediments subjected to contrasted oxygen regimes.

PubMed

Militon, Cécile; Jézéquel, Ronan; Gilbert, Franck; Corsellis, Yannick; Sylvi, Léa; Cravo-Laureau, Cristiana; Duran, Robert; Cuny, Philippe

2015-10-01

To study the impact of oxygen regimes on the removal of polycylic aromatic hydrocarbons (PAHs) in oil-spill-affected coastal marine sediments, we used a thin-layer incubation method to ensure that the incubated sediment was fully oxic, anoxic, or was influenced by oxic-anoxic switches without sediment stirring. Hydrocarbon content and microbial assemblages were followed during 60 days to determine PAH degradation kinetics and microbial community dynamics according to the oxygenation regimes. The highest PAH removal, with 69 % reduction, was obtained at the end of the experiment under oxic conditions, whereas weaker removals were obtained under oscillating and anoxic conditions (18 and 12 %, respectively). Bacterial community structure during the experiment was determined using a dual 16S rRNA genes/16S rRNA transcripts approach, allowing the characterization of metabolically active bacteria responsible for the functioning of the bacterial community in the contaminated sediment. The shift of the metabolically active bacterial communities showed that the selection of first responders belonged to Pseudomonas spp. and Labrenzia sp. and included an unidentified Deltaproteobacteria-irrespective of the oxygen regime-followed by the selection of late responders adapted to the oxygen regime. A novel unaffiliated phylotype (B38) was highly active during the last stage of the experiment, at which time, the low-molecular-weight (LMW) PAH biodegradation rates were significant for permanent oxic- and oxygen-oscillating conditions, suggesting that this novel phylotype plays an active role during the restoration phase of the studied ecosystem.

Multiproxy Study of a Holocene Record From Western Pescadero Basin, Gulf of California, Mexico: Paleoclimatic inferences

NASA Astrophysics Data System (ADS)

Perez-Cruz, L. L.; Valdez, M.; Roy, P. D.

2013-12-01

A sedimentary sequence (gravity core T-56, 256 cm length) from Pescadero Basin on the western side of the Gulf of California is analyzed as part of a multiproxy study. The core was collected within the Oxygen Minimum Zone (OMZ) at 597 m depth, aboard of the R/V "El Puma". Pescadero basin is located at mouth of the gulf; in a location sensitive to record the changes in the gulf and the Eastern Pacific Ocean. The sedimentary sequence is analyzed to contribute to understanding the climatic variability in the southern part of the gulf of California during the Holocene using geochemistry (major and trace elements and Corg), magnetic properties and benthic foraminifera assemblages as proxy of changes in paleoproductivity, paleoprecipitation and bottom water oxygenation. The core is characterized by silty-clay sediments, and exhibits a turbidite between 130 and 235 cm, distinguished by sandy sediments and reworking material. From 130 cm to the top it shows a visible laminated structure. Chronology is based on six AMS radiocarbon dates, and estimated sedimentation rates are 0.22, 0.18, 0.17 and 0.05 mm/yr. The core covers c. last 10,500 years. Variations in major and trace elements (Ti, K, Al, K, Zr) and magnetic susceptibility indicate fluctuations in terrigenous input related to changes in hydrological conditions, Benthic foraminifera assemblages and Corg along the sequence indicate that Pescadero basin is sensitive to paleoceanographic changes. Corg and benthic foraminiferal assemblages show downcore variations related to paleoproductivity changes. For the Early Holocene, low values of Corg and epifaunal benthic foraminifera suggest oxic conditions in bottom waters and strong stratification with low productivity. Organic carbon shows higher values towards the bottom of the core, for the last 1300 years.

Planktic foraminiferal response to early Eocene carbon cycle perturbations in the southeast Atlantic Ocean (ODP Site 1263)

NASA Astrophysics Data System (ADS)

Luciani, Valeria; D'Onofrio, Roberta; Dickens, Gerald R.; Wade, Bridget S.

2017-11-01

At low latitude locations in the northern hemisphere, striking changes in the relative abundances and diversity of the two dominant planktic foraminifera genera, Morozovella and Acarinina, are known to have occurred close to the Early Eocene Climatic Optimum (EECO; 49-53 Ma). Lower Eocene carbonate-rich sediments at Ocean Drilling Program (ODP) Site 1263 were deposited on a bathymetric high (Walvis Ridge) at 40° S, and afford an opportunity to examine such planktic foraminiferal assemblage changes in a temperate southern hemisphere setting. We present here quantified counts of early Eocene planktic foraminiferal assemblages from Hole 1263B, along with bulk sediment stable isotope analyses and proxy measurements for carbonate dissolution. The bulk sediment δ13C record at Site 1263 resembles similar records generated elsewhere, such that known and inferred hyperthermal events can be readily identified. Although some carbonate dissolution has occurred, the well-preserved planktic foraminiferal assemblages mostly represent primary changes in environmental conditions. Our results document the permanent decrease in Morozovella abundance and increase in Acarinina abundance at the beginning of the EECO, although this switch occurred 165 kyr after that at low-latitude northern hemisphere locations. This suggests that unfavourable environmental conditions for morozovellids at the start of the EECO, such as sustained passage of a temperature threshold or other changes in surface waters, occurred at lower latitudes first. The remarkable turnover from Morozovella to Acarinina was widely geographically widespread, although the causal mechanism remains elusive. In addition, at Site 1263, we document the virtual disappearance within the EECO of the biserial chiloguembelinids, commonly considered as inhabiting intermediate water depths, and a reduction in abundance of the thermocline-dwelling subbotinids. We interpret these changes as signals of subsurface water properties, perhaps warming, and the associated contraction of ecological niches.

Subfossil remains of Pediastrum - a tool to obtain palaeolimnological information parallel to pollen analysis?

NASA Astrophysics Data System (ADS)

Turner, F.; Zhu, L.; Ma, Q.; Peng, P.; Lü, X.

2014-12-01

It has been a long-time goal of palynologists to obtain additionally palaeoenvironmental information by the study of Quaternary non-pollen-palynomorphs (NPPs) in pollen slides. As a group of NPPs, subfossil remains of green algae of the genus Pediastrum (fam. Hydrodictyaceae) are frequently found in lake sediments and withstand the palynological standard preparation methods. Determination of Pediastrum taxa to subspecies level is relatively easy with a standard light microscope. Very few studies, however, have used them as palaeolimnological indicators and the knowledge on recent distribution and ecology of many taxa is limited. Introducing new data from Northwestern Europe and the Tibetan Plateau, we show that analysis of subfossil Pediastrum assemblages can reveal valuable information on limnological and climate parameters. Shifts in taxonomic composition of Pediastrum assemblages from lake sediments in northern Germany are shown to strongly reflect the Northern Atlantic Late Glacial climate oscillations. In contrast to previous studies that recognized trophic state as the main driver of change in Pediastrum species composition, we identify climate shifts and related factors as the major drivers of community change. Water depth and trophic state probably acted as secondary factors only. Ongoing research compares the composition of Pediastrum assemblages in surface sediments of Tibetan lakes to environmental variables. While Pediastrum algae are shown to be a part of phytoplankton communities in freshwater to mesosaline lakes, shifts in species composition along the salinity gradient indicate the possible use of the algae group as palaeobioindicator for past humidity changes on the Tibetan Plateau. Additionally, investigations on the relation between water depth and the Pediastrum species composition in lake Taro Co (4575 m asl.) are presented. Our results suggest this algae group has great potential for enabling environmental inferences.

Late-Glacial Environmental Changes South of the Wisconsinan Terminal Moraine in the Eastern United States

NASA Astrophysics Data System (ADS)

Russell, Emily W. B.; Stanford, Scott D.

2000-01-01

Palynological analyses of two sediment cores, one 2.4 m long from northern Delaware, dated about 16,300 to 14,700 14C yr B.P., and one 1.8 m long from New Jersey just south of the Wisconsinan terminal moraine and dated about 13,600 to 12,500 14C yr B.P., give the first detailed evidence of vegetation in this area during these periods. The overall assemblages are similar to each other, with Picea and Pinus dominating the arboreal pollen and Poaceae and Cyperaceae the herbaceous flora. Nonarboreal pollen contributes about 30-50% of the total, indicating a very open vegetation or a mix of forest patches and open areas. Especially in Delaware, there is a diversity of other herbaceous pollen, including members of the Asteraceae, Fabaceae, and Ranunculaceae. The assemblages do not resemble current North American tundra or boreal forest assemblages; rather, they resemble assemblages characteristic of tundra on recently exposed land surfaces north of the Wisconsinan terminal moraine. The persistence of the assemblages for 1500-2000 years in late-glacial time suggests stable and cold climate during this time of glacier retreat.

Late-glacial environmental changes south of the Wisconsinan terminal moraine in the Eastern United States

USGS Publications Warehouse

Russell, E.W.B.; Stanford, S.D.

2000-01-01

Palynological analyses of two sediment cores, one 2.4 m long from northern Delaware, dated about 16,300 to 14,700 14C yr B.P., and one 1.8 m long from New Jersey just south of the Wisconsinan terminal moraine and dated about 13,600 to 12,500 14C yr B.P., give the first detailed evidence of vegetation in this area during these periods. The overall assemblages are similar to each other, with Picea and Pinus dominating the arboreal pollen and Poaceae and Cyperaceae the herbaceous flora. Nonarboreal pollen contributes about 30-50% of the total, indicating a very open vegetation or a mix of forest patches and open areas. Especially in Delaware, there is a diversity of other herbaceous pollen, including members of the Asteraceae, Fabaceae, and Ranunculaceae. The assemblages do not resemble current North American tundra or boreal forest assemblages; rather, they resemble assemblages characteristic of tundra on recently exposed land surfaces north of the Wisconsinan terminal moraine. The persistence of the assemblages for 1500-2000 years in late-glacial time suggests stable and cold climate during this time of glacier retreat.

The 'North American shale composite' - Its compilation, major and trace element characteristics

NASA Technical Reports Server (NTRS)

Gromet, L. P.; Dymek, R. F.; Haskin, L. A.; Korotev, R. L.

1984-01-01

North American shale composite (NASC) major element composition and compilation are presented, together with rare earth element (REE) redeterminations obtained by high precision analytical methods. The major element composition of the NASC compares closely with other average shale compositions, and significant portions of the REE and some other trace elements are contained in minor phases. The uneven REE distribution in NASC powder appears to yield the heterogeneity in analyzed aliquants. REE distributions of detrital sediments may to some extent be dependent on their minor mineral assemblages and the sedimentological factors controlling these assemblages.

Trace-fossil and storm-deposit relationships of San Carlos formation, west Texas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Metz, C.L.; Bednarski, S.P.

1986-05-01

Two distinct assemblages of trace fossils are preserved in the storm deposits in delta-front facies of the Upper Cretaceous San Carlos Formation, west Texas. The assemblages represent two widely differing responses to storm deposition and sediment-trace-fossil relationships, indicating that other environmental parameters, probably water depth and oxygen levels, influenced trace-fossil distribution within the San Carlos delta front. Evidence of the storm-deposited nature of the sandstones includes a scoured basal contact, planar to hummocky cross-stratification, and a upper contact that is either ripple marked or is gradational with overlying shales.

Benthic foraminiferal assemblages reveal the history of the Burdigalian Seaway

NASA Astrophysics Data System (ADS)

Piller, W. E.; Grunert, P.; Harzhauser, M.

2013-12-01

The opening and closure of seaways have immanent paleoclimatic, paleoceanographic and paleobiogeographic consequences as they determine the exchange of water masses. During the Oligocene to Miocene severe alterations of marine gateway configuration shaped the evolution of the Mediterranean - Paratethys region. From early to middle Burdigalian (20.4-17.5 Myrs) the Burdigalian Seaway connected the western Mediterranean Sea with the Central Paratethys Sea via the North Alpine Foreland Basin (NAFB). Its evolution resulted in profound paleoceanograpic and -geographic changes, and initiated a wave of faunal immigration from the Atlantic and Mediterranean into the Paratethys that had a severe impact on marine ecosystems. A detailed Early Miocene proxy record integrating seismic images, microfossil assemblages and geochemical analyses has been recently established for the Puchkirchen Basin (PB) as part of the NAFB. Herein, we exemplarily show the reconstruction of the dynamic early to middle Burdigalian paleoenvironment based on a quantitative evaluation of benthic foraminiferal assemblages from drill-sites and outcrops. Four major phases in PB development are distinguished, and new stratigraphic constraints allow discussing the results in the context of the evolution of the Burdigalian Seaway: 1. The global early Burdigalian sea-level rise initiated a marine transgression in the NAFB. In the PB, a long-lived basin-axial channel system was reactivated resulting in turbiditic and mass-flow deposition. The unstable upper bathyal environment is reflected in a low diverse autochthonous benthic foraminiferal fauna mainly composed of Bathysiphon filiformis. 2. The perpetuating transgression flooded large shelf areas and established the Burdigalian Seaway. The channel belt was cut off from its sediment sources and shut down. Subsequently, sedimentation was controlled by episodic turbidites from the southern basin margin, and large NE prograding delta fans. High sedimentation rates and strong terrestrial input led to the development of diverse foraminiferal faunas that are largely composed of agglutinated species. The encountered astrorhizids, ammodiscids and textualriids are adapted to high organic matter input and suboxic bottom-waters. Assemblages dominated by Bathysiphon filiformis occur in phases of turbidite deposition. 3. At ~19 Ma the Burdigalian Seaway became a vast shelf sea when increasing sedimentation rates led to the upfill of the PB. At the same time marine sedimentation reached its maximum extent in the NAFB. Characteristic hyaline shelf faunas composed of Lenticulina, Amphicoryna, Melonis, Cibcidoides and Ammonia developed along the inner-outer neritic shelf environments. 4. The beginning of a regression at ~18 Ma heralded the closure of the Burdigalian Seaway. Biofacies distribution shows a prograding tide-influenced shelf and widespread shallow water environments largely dominated by Ammonia, Elphidium and Cibicidoides developed. The closure of the Burdigalian Seaway initiated a major paleogeographic reorganization resulting in the final retreat of the Central Paratethys towards the east.

The paleogeographic significance of Aquilapollenites occurrence in Pakistan

NASA Astrophysics Data System (ADS)

Khan, Asrar M.; Srivastava, Satish K.

2006-12-01

The occurrence of the genus Aquilapollenites in Upper Cretaceous and Neogene sediments of northwestern Pakistan is reported here. Aquilapollenites amplus, Aquilapollenites reductus, and Aquilapollenites sp. occur in the Maastrichtian palynomorph assemblage from an outcrop sample of the Mir Ali section, northern Waziristan. Aquilapollenites medeis in the Neogene Murgha Faqir Zai Formation of the Pishin Basin, Balochistan, is considered a reworked Cretaceous specimen. The Upper Cretaceous sediments of the Asian plate on the Tethys margin are considered to be the source of Aquilapollenites spp. in these samples.

Stable carbon and oxygen isotope record of central Lake Erie sediments

USGS Publications Warehouse

Tevesz, M.J.S.; Spongberg, A.L.; Fuller, J.A.

1998-01-01

Stable carbon and oxygen isotope data from mollusc aragonite extracted from sediment cores provide new information on the origin and history of sedimentation in the southwestern area of the central basin of Lake Erie. Sediments infilling the Sandusky subbasin consist of three lithologic units overlying glacial deposits. The lowest of these is a soft gray mud overlain by a shell hash layer containing Sphaerium striatinum fragments. A fluid mud unit caps the shell hash layer and extends upwards to the sediment-water interface. New stable isotope data suggest that the soft gray mud unit is of postglacial, rather than proglacial, origin. These data also suggest that the shell hash layer was derived from erosional winnowing of the underlying soft gray mud layer. This winnowing event may have occurred as a result of the Nipissing flood. The Pelee-Lorain moraine, which forms the eastern boundary of the Sandusky subbasin, is an elevated area of till capped by a sand deposit that originated as a beach. The presence of both the shell hash layer and relict beach deposit strengthens the interpretation that the Nipissing flood was a critical event in the development of the southwestern area of the central basin of Lake Erie. This event, which returned drainage from the upper lakes to the Lake Erie basin, was a dominant influence on regional stratigraphy, bathymetry, and depositional setting.

The zoonotic potential of Giardia intestinalis assemblage E in rural settings.

PubMed

Abdel-Moein, Khaled A; Saeed, Hossam

2016-08-01

Giardiasis is a globally re-emerging protozoan disease with veterinary and public health implications. The current study was carried out to investigate the zoonotic potential of livestock-specific assemblage E in rural settings. For this purpose, a total of 40 microscopically positive Giardia stool samples from children with gastrointestinal complaints with or without diarrhea were enrolled in the study as well as fecal samples from 46 diarrheic cattle (18 dairy cows and 28 calves). Animal samples were examined by sedimentation method to identify Giardia spp., and then, all Giardia positive samples from human and animals were processed for molecular detection of livestock-specific assemblage E through amplification of assemblage-specific triosephosphate isomerase (tpi) gene using nested polymerase chain reaction (PCR). The results of the study revealed high unexpected occurrence of assemblage E among human samples (62.5 %), whereas the distribution among patients with diarrhea and those without was 42.1 and 81 %, respectively. On the other hand, the prevalence of Giardia spp. among diarrheic dairy cattle was (8.7 %), while only calves yielded positive results (14.3 %) and all bovine Giardia spp. were genetically classified as Giardia intestinalis assemblage E. Moreover, DNA sequencing of randomly selected one positive human sample and another bovine one revealed 100 and 99 % identity with assemblage E tpi gene sequences available at GenBank after BLAST analysis. In conclusion, the current study highlights the wide dissemination of livestock-specific assemblage E among humans in rural areas, and thus, zoonotic transmission cycle should not be discounted during the control of giardiasis in such settings.

Mid-Dinantian Waulsortian buildups in the Dublin Basin, Ireland

NASA Astrophysics Data System (ADS)

Somerville, Ian D.; Strogen, Peter; Jones, Gareth Ll.

1992-08-01

The sedimentary history and biostratigraphic setting of Waulsortian carbonate buildups of the Feltrim Limestone Formation (late Courceyan to early Chadian) within the Dublin Basin are described. There is no unique precursor or successor facies to this formation, and the massive Waulsortian banks are composed predominantly of peloidal, skeletal wackestones and lime mudstones with packstones near the tops of banks. These banks form tabular bodies of moderate relief and are interbedded with thin shales and argillaceous crinoidal limestones of inter-bank facies. In the southwest of the basin inter-bank facies are rare and the bank facies have abundant stromatactis cavities, and uniquely at Roselawn a fauna of rugose corals. All buildups in the Dublin Basin have Phase C and/or D component assemblages of Lees and Miller (1985) and are interpreted as accumulating in moderately shallow-water depths, near or within the photic zone. Isopachs for the Feltrim Limestone Formation show a NE-SW-trending axial depocentre where the Waulsortian facies is in excess of 400 m thickness. Deposition appears to have taken place on this "double-sided" ramp, in a manner similar to the model of Lees (1982) for Belgium and southern Britain. Soft-sediment deformation such as large-scale slumping, shale-injections and water-escape structures, not previously recorded from these rocks is widespread. The upper surface of the Feltrim Limestone Formation is fissured and displays a prominent erosion surface. Termination of Waulsortian facies deposition and influx of terrigenous sediment was caused by rapid uplift, attributed to Chadian tectonism. However, eustatic sea-level fall cannot be ruled out as a partial cause of the demise of the Waulsortian.

A new benthic foraminiferal proxy for near-bottom current velocities in the Gulf of Cadiz, northeastern Atlantic Ocean

NASA Astrophysics Data System (ADS)

Schönfeld, Joachim

2002-10-01

Recent benthic foraminiferal assemblages were analyzed in the Gulf of Cadiz, northeastern Atlantic, to study the impact of the Mediterranean Outflow Water (MOW) undercurrent on the benthic environment. Foraminiferal counts and the analysis of specimens attached to hard substrates from 26 surface samples reveal a relationship of epibenthic assemblages with sedimentary and hydrodynamic environment. Epibenthic species make up as much as 60% of the living assemblage at proximal sites with high current velocities and 3-18% in distal areas or near the margins of the MOW flow paths at low velocities. These foraminifers inhabit elevated substrates only within the MOW, which evidently provides an ecological niche for opportunistic suspension feeders. They adapt their settling elevation dynamically and occur at greater heights above the ambient sediment surface under stronger currents. Mobility, fixation strength, suspension feeding, and reproduction efficiency emerge as individual capabilities promoting the occupation of elevated substrates by certain epibenthic species. The active microhabitat selection is pursued as basic strategy of these foraminifers to optimize their food acquisition. A better access to food sources stimulates reproduction and leads to a greater contribution of foraminiferal tests to the surface sediments. Elevated epibenthos percentages from the dead assemblage and current velocities prevailing at the sampling sites are closely correlated. A compilation including other data from southern Portugal, Florida Straits, and the English Channel infers an exponential relationship between epibenthic abundances and flow strength implying that endobenthic species prevail even under high current velocities. A linear model provides a significantly better fit for the Gulf of Cadiz data however. This relation is used for a case study in order to estimate near-bottom current strengths for the late Holocene Peak III contourite in core M39008-3. Trends and absolute values of current velocities, inferred from the benthic foraminiferal proxy, are the same scale as estimates obtained from sediment grain-size distribution and hydrodynamic models. Epibenthic foraminifera thus bear a high potential as proxy for palaeocurrent studies that even may overcome objections by predetermined grain-size distributions in deep-sea cores.

Effects of reclamation on macrobenthic assemblages in the coastline of the Arabian Gulf: a microcosm experimental approach.

PubMed

Naser, Humood A

2011-03-01

Coastal reclamation and modifications are extensively carried out in Bahrain, which may physically smother the coastal and subtidal habitats resulting in changes to abundance and distribution of macrobenthic assemblages. A microcosm laboratory experiment using three common macrobenthic invertebrates from a proposed reclaimed coastal area was preformed to examine their responses to mud burial using marine sediment collected from a designated borrow area. Significant difference in numbers of survived organisms between control and experimental treatments with a survival percentage of 41.8% for all of the selected species was observed. The polychaete Perinereis nuntia showed the highest percentage of survival (57.1%) followed by the bivalve Tellinavaltonis (42.3%) and the gastropod Cerithidea cingulata (24.0%). Quantifying species responses to sediment burial resulted from dredging and reclamation will aid in predicting the expected ecological impacts associated with coastal developments and subsequently minimizing these impacts and maintaining a sustainable use of coastal and marine ecosystems in the Arabian Gulf. Copyright © 2010 Elsevier Ltd. All rights reserved.

Unconventional maar diatreme and associated intrusions in the soft sediment-hosted Mardoux structure (Gergovie, France)

NASA Astrophysics Data System (ADS)

Valentine, Greg A.; van Wyk de Vries, Benjamin

2014-03-01

A Miocene age volcanic-hypabyssal structure comprising volcaniclastic deposits and mafic intrusions is exposed with vertical relief of ˜110 m on the side of Gergovie Plateau (Auvergne, France). Three main volcaniclastic facies are: (1) Fluidal tuff breccia composed of juvenile basalt and sediment clasts with dominantly fluidal shapes, with several combinations of basalt and sediment within individual clasts. (2) Thickly bedded lapilli tuff composed of varying proportions of fine-grained sediment derived from Oligocene-Miocene lacustrine marls and mudstones and basaltic lapilli, blocks, and bombs. (3) Planar-bedded tuff forming thin beds of fine to coarse ash-size sedimentary material and basalt clasts. Intrusive bodies in the thickly bedded lapilli tuff range from irregularly shaped and anastomosing dikes and sills of meters to tens of meters in length, to a main feeder dike that is up to ˜20 m wide, and that flares into a spoon-shaped sill at ˜100 m in diameter and 10-20 m thick in the eastern part of the structure. Volcaniclastic deposits and structural features suggest that ascending magma entrained soft, saturated sediment host material into the feeder dike and erupted fluidal magma and wet sediment via weak, Strombolian-like explosions. Host sediment and erupted material subsided to replace the extracted sediments, producing the growth subsidence structure that is similar to upper diatreme facies in typical maar diatremes but lacks evidence for explosive disruption of diatreme fill. Irregularly shaped small intrusions extended from the main feeder dike into the diatreme, and many were disaggregated due to shifting and subsidence of diatreme fill and recycled via eruption. The Mardoux structure is an "unconventional" maar diatreme in that it was produced mainly by weak explosive activity rather than by violent phreatomagmatic explosions and is an example of complex coupling between soft sediment and ascending magma.

Rock magnetic and anisotropy of magnetic susceptibility(AMS) of earthquake affected soft sediments: Examples from Shillong and Latur (Deccan Trap), India.

NASA Astrophysics Data System (ADS)

Lakshmi, B. V., ,, Dr.; Gawali, Mr. Praveen B.; Deenadayalan, K., ,, Dr.; Ramesh, D. S., ,, Prof.

2017-04-01

Rock magnetic and anisotropy of magnetic susceptibility (AMS) of earthquake affected soft sediments: Examples from Shillong and Latur (Deccan Trap), India. B.V.Lakshmi, Praveen B.Gawali, K.Deenadayalan and D.S.Ramesh Indian Institute of Geomagnetism, plot 5, sector 18, Near Kalamboli Highway, New Panvel(W), Navi Mumbai 410218 Combined rock magnetism and anisotropy of magnetic susceptibility (AMS) studies on earthquake induced soft and non-soft sediments from Shillong and Latur, India have thrown up interesting results. The morphology of hysteresis loops, the pattern of isothermal remanent magnetization (IRM) acquisition, and temperature dependence of susceptibility indicate that titano-magnetite/magnetite is the main magnetic carrier in these sediments. We also analyzed the anisotropy of magnetic susceptibility (AMS) of liquefaction features within the seismically active Dauki fault, Shillong Plateau. We discovered that host sediments (non-liquefied), are characterized by an oblate AMS ellipsoid and liquefied sediment are characterized by a triaxial AMS ellipsoid, well grouped maximum susceptibility axis K1 (NNW-SSE trend). Field evidence and AMS analysis indicate that most of these features were emplaced by injection inferred to be due to seismically triggered fluidization. Anisotropy of magnetic susceptibility (AMS) of deformed and undeformed unconsolidated clay samples of Deccan Trap terrain from the 2000-year-old paleoearthquake site of Ther village, Maharashtra, India, was also studied. Such deposits are rare in the compact basaltic terrain because of which the results acquired are very important. The undeformed clay samples exhibit typical sedimentary fabric with an oblate AMS ellipsoid, whereas the deformed samples are tightly grouped in the inferred compression direction, probably effected by an earthquake, exhibiting prolate as well as oblate AMS ellipsoids. Rock magnetic and AMS methodology can help understand the behavior of different sediments to the regional deformational processes active in the Himalayan region, and possibly local deformational activities in the compact Deccan trap region. The accumulating stress and strain direction can be delineated to infer strike of the forces accumulating stresses. These studies can be used to build the chronology of past earthquakes.

Heavy metals distribution in the coral reef ecosystems of the Northern Red Sea

NASA Astrophysics Data System (ADS)

Ali, Abdel-Hamid A. M.; Hamed, Mohamed A.; Abd El-Azim, Hoda

2011-03-01

Concentrations of seven heavy metals (Cu, Zn, Pb, Cd, Ni, Co and Fe) were measured in the seawater, sediments, common scleractinian reef-building corals and soft corals (Octocorallia : Alcyonacea) at seven reef sites in the Northern Red Sea: I (Hurghada), II (Ras Za'farana), III (El-Ain Al-Sukhna), IV (El-Tur), V (Sha'b Rashdan), VI (Sharm El-Sheikh) and VII (Dahab). Levels of heavy metals were considerably elevated in seawater, sediments and corals collected from reef sites exposed to increased environmental contamination, as a result of diversified natural and anthropogenic inputs. Soft corals of genera Lithophyton, Sarcophyton and Sinularia showed higher concentrations of Zn, Pb, Cd and Ni than hard coral genera Acropora and Stylophora. Soft coral Sarcophyton trocheliophorum collected from El Ain Al-Suhkna (Gulf of Suez) had greater concentration of Cu, followed by hard corals Acropora pharaonis and Acropora hemprichi. The elevated levels of Zn, Cd and Ni were reported in the dry tissue of soft coral Sinularia spp. On the other hand, the soft coral Lithophyton arboreum displayed the highest concentration of Pb at Sha'b Rashdan (Gulf of Suez) and elevated concentration of Zn at Sharm El-Sheikh. Sediments showed significantly higher concentration of Fe than corals. The higher levels of Fe in hard corals than soft corals reflected the incorporation of Fe into the aragonite and the chelation with the organic matrix of the skeleton. The greater abundance of soft corals in metal-contaminated reef sites and the elevated levels of metals in their tissue suggesting that the soft corals could develop a tolerance mechanism to relatively high concentrations of metals. Although the effects of heavy metals on reef corals were not isolated from the possible effects of other stresses, the percentage cover of dead corals were significantly higher as the concentrations of heavy metals increased.

Spatio-Temporal Dynamics of Exploited Groundfish Species Assemblages Faced to Environmental and Fishing Forcings: Insights from the Mauritanian Exclusive Economic Zone

PubMed Central

Kidé, Saïkou Oumar; Manté, Claude; Dubroca, Laurent; Demarcq, Hervé; Mérigot, Bastien

2015-01-01

Environmental changes and human activities can have strong impacts on biodiversity and ecosystem functioning. This study investigates how, from a quantitative point of view, simultaneously both environmental and anthropogenic factors affect species composition and abundance of exploited groundfish assemblages (i.e. target and non-target species) at large spatio-temporal scales. We aim to investigate (1) the spatial and annual stability of groundfish assemblages, (2) relationships between these assemblages and structuring factors in order to better explain the dynamic of the assemblages’ structure. The Mauritanian Exclusive Economic Zone (MEEZ) is of particular interest as it embeds a productive ecosystem due to upwelling, producing abundant and diverse resources which constitute an attractive socio-economic development. We applied the multi-variate and multi-table STATICO method on a data set consisting of 854 hauls collected during 14-years (1997–2010) from scientific trawl surveys (species abundance), logbooks of industrial fishery (fishing effort), sea surface temperature and chlorophyll a concentration as environmental variables. Our results showed that abiotic factors drove four main persistent fish assemblages. Overall, chlorophyll a concentration and sea surface temperature mainly influenced the structure of assemblages of coastal soft bottoms and those of the offshore near rocky bottoms where upwellings held. While highest levels of fishing effort were located in the northern permanent upwelling zone, effects of this variable on species composition and abundances of assemblages were relatively low, even if not negligible in some years and areas. The temporal trajectories between environmental and fishing conditions and assemblages did not match for all the entire time series analyzed in the MEEZ, but interestingly for some specific years and areas. The quantitative approach used in this work may provide to stakeholders, scientists and fishers a useful assessment for the spatio-temporal dynamics of exploited assemblages under stable or changing conditions in fishing and environment. PMID:26505198

Elevated land runoff after European settlement perturbs persistent foraminiferal assemblages on the Great Barrier Reef.

PubMed

Uthicke, S; Patel, F; Ditchburn, R

2012-01-01

Coral reefs are under pressure from a variety of human-induced disturbances, but demonstration of ecosystem changes and identification of stressors are often difficult. We tested whether global change or increased agricultural runoff after European settlement of Northeast Australia (ca. 1860) has affected inshore reefs of the Great Barrier Reef. Eleven sediment cores were retrieved from inner reefs, intermediate reefs, and outer-island reefs, and benthic foraminiferal assemblages were analyzed in dated (14C, 210Pb, 137Cs) core sections (N = 82 samples). Data were grouped into six age bands (< 55, 55-150, 150-500, 500-1000, 1000-1500, and > 1500 yr). Principal component analysis and two-factor (Zone and Age) permutational analysis of variance (PERMANOVA) suggested that assemblages from the three zones were significantly different from each other over several millennia, with symbiont-bearing (mixotrophic) species dominating the outer reefs. A significant interaction term indicated that within-zone patterns varied. Assemblages in outer reefs unaffected from increased land runoff were persistent until present times. In both other zones, assemblages were also persistent until 150 yr ago, suggesting that benthic foraminiferal assemblages are naturally highly persistent over long (> 2000 yr) timescales. Assemblages in core sections < 55 yr old from inner reefs were significantly (post hoc t test) different from those older than 150 yr. Similarly, assemblages < 55 yr old from intermediate reefs were significantly different compared to older assemblages. A multivariate regression tree (environmental variables: Zone and Age) explained 56.8% of the variance in foraminiferal assemblages and confirmed patterns identified by PERMANOVA. With some exceptions, changes on the inner and intermediate reefs were consistent with a model predicting that increased nutrients and higher turbidity enhance relative abundance of heterotrophic species. Given that assemblages did not change in outer-island reefs (not impacted by runoff) we argue that changes in assemblages due to global change can be rejected as an explanation. Thus, the findings are more consistent with the hypothesis that agricultural runoff since European settlement altered foraminiferal assemblages than with the hypothesis that global forcing caused changes.

California State Waters Map Series: offshore of Refugio Beach, California

USGS Publications Warehouse

Johnson, Samuel Y.; Dartnell, Peter; Cochrane, Guy R.; Golden, Nadine E.; Phillips, Eleyne L.; Ritchie, Andrew C.; Krigsman, Lisa M.; Dieter, Bryan E.; Conrad, James E.; Greene, H. Gary; Seitz, Gordon G.; Endris, Charles A.; Sliter, Ray W.; Wong, Florence L.; Erdey, Mercedes D.; Gutierrez, Carlos I.; Yoklavich, Mary M.; East, Amy E.; Hart, Patrick E.; Johnson, Samuel Y.; Cochran, Susan A.

2015-01-01

Seafloor habitats in the broad Santa Barbara Channel region consist of significant amounts of soft, unconsolidated sediment interspersed with isolated areas of rocky habitat that support kelp-forest communities nearshore and rocky-reef communities in deep water. The potential marine benthic habitat types mapped in the Offshore of Refugio Beach map area are directly related to its Quaternary geologic history, geomorphology, and active sedimentary processes. These potential habitats, which lie primarily within the Shelf (continental shelf) but also partly within the Flank (basin flank or continental slope) megahabitats, primarily are composed of soft sediment interrupted by a few carbonate mounds. This homogeneous seafloor of sediment and low-relief bedrock provides promising habitat for groundfish, crabs, shrimp, and other marine benthic organisms.

Integrating Ecosystem Engineering and Food Web Ecology: Testing the Effect of Biogenic Reefs on the Food Web of a Soft-Bottom Intertidal Area

PubMed Central

De Smet, Bart; Fournier, Jérôme; De Troch, Marleen; Vincx, Magda; Vanaverbeke, Jan

2015-01-01

The potential of ecosystem engineers to modify the structure and dynamics of food webs has recently been hypothesised from a conceptual point of view. Empirical data on the integration of ecosystem engineers and food webs is however largely lacking. This paper investigates the hypothesised link based on a field sampling approach of intertidal biogenic aggregations created by the ecosystem engineer Lanice conchilega (Polychaeta, Terebellidae). The aggregations are known to have a considerable impact on the physical and biogeochemical characteristics of their environment and subsequently on the abundance and biomass of primary food sources and the macrofaunal (i.e. the macro-, hyper- and epibenthos) community. Therefore, we hypothesise that L. conchilega aggregations affect the structure, stability and isotopic niche of the consumer assemblage of a soft-bottom intertidal food web. Primary food sources and the bentho-pelagic consumer assemblage of a L. conchilega aggregation and a control area were sampled on two soft-bottom intertidal areas along the French coast and analysed for their stable isotopes. Despite the structural impacts of the ecosystem engineer on the associated macrofaunal community, the presence of L. conchilega aggregations only has a minor effect on the food web structure of soft-bottom intertidal areas. The isotopic niche width of the consumer communities of the L. conchilega aggregations and control areas are highly similar, implying that consumer taxa do not shift their diet when feeding in a L. conchilega aggregation. Besides, species packing and hence trophic redundancy were not affected, pointing to an unaltered stability of the food web in the presence of L. conchilega. PMID:26496349

The Impact of Mass Movement and Fluid Flow during Ridge Subduction inferred from Physical Properties and Zeolite Assemblage in the Upper Plate Slope of the Costa Rica Subduction Zone

NASA Astrophysics Data System (ADS)

Hamahashi, M.; Screaton, E.; Tanikawa, W.; Hashimoto, Y.; Martin, K. M.; Saito, S.; Kimura, G.

2015-12-01

The Costa Rica subduction zone offshore Osa Peninsula is known as an erosive margin with active seismicity and the subduction of the Cocos Ridge. One of the major unknowns in this margin is the nature of the unconformity at the base of the slope sediments in the upper plate and the high velocity materials below. To investigate the geologic processes across the unconformity, we examined the consolidation state and mineral assemblages of the sediments at the mid-slope Site 1380 drilled during IODP Expedition 344 by conducting microstructural observation, particle size analysis, X-ray fluorescence/diffraction analysis and resistivity measurement. The general compaction trend is controlled primarily by grain-size sorting and the physical property transition is likely caused by massive sediment removal under normal fault regime, thickness of which range between ~600-850 m determined from the composite porosity-depth curve. Across the unconformity between the late Pliocene~late Pleistocene silty clay (Unit 1) and late Pliocene~early Pleistocene clayey siltstone (Unit 2), the mineral/element components of the sediments is marked by the transitions in zeolite compositions; Unit 1 consists of laumontite and heulandite, whereas below the unconformity, Unit 2 sediments contain analcime, laumontite, and heulandite, but laumontite become less abundant at lower depth. The experienced temperature of the sediments in Unit 2 is estimated to have reached between ~86 and 122℃ as inferred from analcime burial diagenesis. This may correspond with the greater depth range prior to mass movement and normal faulting. The initial analcime burial diagenetic zone was likely cut off by the sediment removal across the unconformity, and later overprinted by high temperature fluid along the boundary forming laumontite and heulandite in the vicinity. These results illustrate that ridge subduction has substantial potential to cause mass movement, an extensional stress regime, and fluid flow from depth.

Climate warming and agricultural stressors interact to determine stream macroinvertebrate community dynamics.

PubMed

Piggott, Jeremy J; Townsend, Colin R; Matthaei, Christoph D

2015-05-01

Global climate change is likely to modify the ecological consequences of currently acting stressors, but potentially important interactions between climate warming and land-use related stressors remain largely unknown. Agriculture affects streams and rivers worldwide, including via nutrient enrichment and increased fine sediment input. We manipulated nutrients (simulating agricultural run-off) and deposited fine sediment (simulating agricultural erosion) (two levels each) and water temperature (eight levels, 0-6°C above ambient) simultaneously in 128 streamside mesocosms to determine the individual and combined effects of the three stressors on macroinvertebrate community dynamics (community composition and body size structure of benthic, drift and insect emergence assemblages). All three stressors had pervasive individual effects, but in combination often produced additive or antagonistic outcomes. Changes in benthic community composition showed a complex interplay among habitat quality (with or without sediment), resource availability (with or without nutrient enrichment) and the behavioural/physiological tendency to drift or emerge as temperature rose. The presence of sediment and raised temperature both resulted in a community of smaller organisms. Deposited fine sediment strongly increased the propensity to drift. Stressor effects were most prominent in the benthic assemblage, frequently reflected by opposite patterns in individuals quitting the benthos (in terms of their propensity to drift or emerge). Of particular importance is that community measures of stream health routinely used around the world (taxon richness, EPT richness and diversity) all showed complex three-way interactions, with either a consistently stronger temperature response or a reversal of its direction when one or both agricultural stressors were also in operation. The negative effects of added fine sediment, which were often stronger at raised temperatures, suggest that streams already impacted by high sediment loads may be further degraded under a warming climate. However, the degree to which this will occur may also depend on in-stream nutrient conditions. © 2015 John Wiley & Sons Ltd.

The Late Pleistocene Contourites on Ceara Rise: Stratigraphy, Sedimentology and Paleoceanography

NASA Astrophysics Data System (ADS)

Ivanova, E. V.; Murdmaa, I.; Borisov, D.; Seitkalieva, E.; Ovsepyan, E.

2016-12-01

The study of sediment cores obtained during the cruises 35 (2012) and 50 (2015) of RV Akademic Ioffe from the Ceara Rise in the western tropical Atlantic strongly supports a significant influence of bottom (contour) currents on the Late Quaternary sedimentation. Seismic evidence of contourites in the study area (migrating contourite sediment waves, furrows) was previously described by Kumar and Embley (1977) and Curry et al. (1995). Widespread distribution of seismic waves on the rise and adjacent areas was suggested by Murdmaa et al (2014) based on the results of high-resolution seismic profiling with SES-2000 deep (4-5 kHz) in 2012. Our sediment cores recovered intercalation of bioturbated clays and silty clays with thin linear or wavy sand and silt layers and lenses implying strong bottom current control on sedimentation. The stratigraphic frame of the reference core AI-3426 retrieved near the summit of the Ceara Rise, at the water depth of 3046 m is based on the foraminiferal (Globorotalia menardii zones), oxygen isotope and AMS-14C data. The core recovered sediments of the last 140 ka with very rich and well-preserved tropical planktic foraminiferal assemblages. G. menardii is common within MIS 1 and 5 and is almost absent in MIS 2-4 and upper MIS 6. The abundance of benthic foraminifers is rather low. However, dominance of Globocassidulina subglobosa in benthic assemblages likely indicates a moderate bottom-current activity on the Ceara Rise during the last glacial. The other 4-5m long sediment cores collected along the seismic profile from the northern and southern slopes demonstrate the similar contourite sedimentological features and insignificant reworking of the Neogene foraminiferal species as inferred from the core AI-3426 along with the significant variations in foraminiferal preservation during the Pleistocene. The study is supported by the projects RSF 14-50-00095, RFBR 14-05-00744 and RFBR 16-35-60111, and Program I3P by RAS.

Fish stomach contents in benthic macroinvertebrate assemblage assessments.

PubMed

Tupinambás, T H; Pompeu, P S; Gandini, C V; Hughes, R M; Callisto, M

2015-01-01

The choice of sampling gears to assess benthic macroinvertebrate communities depends on environmental characteristics, study objectives, and cost effectiveness. Because of the high foraging capacity and diverse habitats and behaviors of benthophagous fishes, their stomach contents may offer a useful sampling tool in studies of benthic macroinvertebrates, especially in large, deep, fast rivers that are difficult to sample with traditional sediment sampling gear. Our objective was to compare the benthic macroinvertebrate communities sampled from sediments with those sampled from fish stomachs. We collected benthic macroinvertebrates and fish from three different habitat types (backwater, beach, riffle) in the wet season, drying season, and dry season along a single reach of the Grande River (Paraná River Basin, southeast Brazil). We sampled sediments through use of a Petersen dredge (total of 216 grabs) and used gill nets to sample fish (total of 36 samples). We analyzed the stomach contents of three commonly occurring benthophagous fish species (Eigenmannia virescens, Iheringichthys labrosus, Leporinus amblyrhynchus). Chironomids dominated in both sampling methods. Macroinvertebrate taxonomic composition and abundances from fish stomachs differed from those from sediment samples, but less so from riffles than from backwater and beach habitats. Macroinvertebrate taxa from E. virescens stomachs were more strongly correlated with sediment samples from all three habitats than were those from the other two species. The species accumulation curves and higher mean dispersion values, compared with with sediment samples suggest that E. virescens is more efficient than sediment samples and the other fish studied at collecting benthic taxa. We conclude that by analyzing the stomach contents of benthophagous fishes it is possible to assess important characteristics of benthic communities (dispersion, taxonomic composition and diversity). This is especially true for studies that only sample fish assemblages to evaluate aquatic ecosystem impacts. Therefore, this approach can be useful to amplify assessments of human impacts, and to incorporate additional bioindicators.

In-situ Geotechnical Investigation of Arctic Nearshore Zone Sediments, Herschel Island, Yukon

NASA Astrophysics Data System (ADS)

Stark, N.; Quinn, B.; Radosavljevic, B.; Lantuit, H.

2016-02-01

The Arctic is currently undergoing rapid changes with regard to ice coverage, permafrost retreat and coastal erosion. In addition to hydrodynamic processes, the sediments in the Arctic nearshore zone are affected by potential variations in freeze-thaw cycles, as well as an increase of abundant suspended sediment introduced by active retrogressive thaw slumps and increased river discharge. During the YUKON14 expedition to Herschel Island, Yukon, in-situ geotechnical testing of nearshore zone sediments was conducted using a portable free fall penetrometer. The research goals were mapping of sediment types, identification of surficial sediment stratification related to recent sediment remobilization or deposition processes, and the investigation of the soil mechanical characteristics of the uppermost seabed surface in the nearshore zone. Approximately 200 sites were tested using the portable free fall penetrometer, and five different geotechnical signatures identified and grouped. Most locations were characterized by a soft sediment top layer that exhibited a noticeably lower sediment strength than the underlying sediment. The results were correlated to existing sediment grain size records and a sediment type interpretation based on side scan sonar backscatter information. Strong spatial variations in sediment type and stiffness were observed, as well as in abundance and thickness of a top layer of very soft and loose sediment. It was attempted to relate the geotechnical signature to site-specific hydrodynamic energy, morphology, and vicinity to thaw slumps. The results will contribute to a detailed investigation of Arctic coastal erosion in the region, and the investigation of the role of geotechnical parameters for Arctic coastal erosion.

Laboratory investigation of the erosion of cohesive sediments under oscillatory flows using a synchronized imaging technique

NASA Astrophysics Data System (ADS)

Sou, In Mei; Calantoni, Joseph; Reed, Allen; Furukawa, Yoko

2012-11-01

A synchronized dual stereo particle image velocimetry (PIV) measurement technique is used to examine the erosion process of a cohesive sediment core in the Small Oscillatory Flow Tunnel (S-OFT) in the Sediment Dynamics Laboratory at the Naval Research Laboratory, Stennis Space Center, MS. The dual stereo PIV windows were positioned on either side of a sediment core inserted along the centerline of the S-OFT allowing for a total measurement window of about 20 cm long by 10 cm high with sub-millimeter spacing on resolved velocity vectors. The period of oscillation ranged from 2.86 to 6.12 seconds with constant semi-excursion amplitude in the test section of 9 cm. During the erosion process, Kelvin-Helmholtz instabilities were observed as the flow accelerated in each direction and eventually were broken down when the flow reversed. The relative concentration of suspended sediments under different flow conditions was estimated using the intensity of light scattered from the sediment particles in suspension. By subtracting the initial light scattered from the core, the residual light intensity was assumed to be scattered from suspended sediments eroded from the core. Results from two different sediment core samples of mud and sand mixtures will be presented.

Microbial community structure and function on sinking particles in the North Pacific Subtropical Gyre

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fontanez, Kristina M.; Eppley, John M.; Samo, Ty J.

Sinking particles mediate the transport of carbon and energy to the deep-sea, yet the specific microbes associated with sedimenting particles in the ocean's interior remain largely uncharacterized. In this study, we used particle interceptor traps (PITs) to assess the nature of particle-associated microbial communities collected at a variety of depths in the North Pacific Subtropical Gyre. Comparative metagenomics was used to assess differences in microbial taxa and functional gene repertoires in PITs containing a preservative (poisoned traps) compared to preservative-free traps where growth was allowed to continue in situ (live traps). Live trap microbial communities shared taxonomic and functional similaritiesmore » with bacteria previously reported to be enriched in dissolved organic matter (DOM) microcosms (e.g., Alteromonas and Methylophaga), in addition to other particle and eukaryote-associated bacteria (e.g., Flavobacteriales and Pseudoalteromonas). Poisoned trap microbial assemblages were enriched in Vibrio and Campylobacterales likely associated with eukaryotic surfaces and intestinal tracts as symbionts, pathogens, or saprophytes. The functional gene content of microbial assemblages in poisoned traps included a variety of genes involved in virulence, anaerobic metabolism, attachment to chitinaceaous surfaces, and chitin degradation. The presence of chitinaceaous surfaces was also accompanied by the co-existence of bacteria which encoded the capacity to attach to, transport and metabolize chitin and its derivatives. Distinctly different microbial assemblages predominated in live traps, which were largely represented by copiotrophs and eukaryote-associated bacterial communities. Predominant sediment trap-assocaited eukaryotic phyla included Dinoflagellata, Metazoa (mostly copepods), Protalveolata, Retaria, and Stramenopiles. In conclusion, these data indicate the central role of eukaryotic taxa in structuring sinking particle microbial assemblages, as well as the rapid responses of indigenous microbial species in the degradation of marine particulate organic matter (POM) in situ in the ocean's interior.« less

Microbial community structure and function on sinking particles in the North Pacific Subtropical Gyre

DOE PAGES

Fontanez, Kristina M.; Eppley, John M.; Samo, Ty J.; ...

2015-05-19

Sinking particles mediate the transport of carbon and energy to the deep-sea, yet the specific microbes associated with sedimenting particles in the ocean's interior remain largely uncharacterized. In this study, we used particle interceptor traps (PITs) to assess the nature of particle-associated microbial communities collected at a variety of depths in the North Pacific Subtropical Gyre. Comparative metagenomics was used to assess differences in microbial taxa and functional gene repertoires in PITs containing a preservative (poisoned traps) compared to preservative-free traps where growth was allowed to continue in situ (live traps). Live trap microbial communities shared taxonomic and functional similaritiesmore » with bacteria previously reported to be enriched in dissolved organic matter (DOM) microcosms (e.g., Alteromonas and Methylophaga), in addition to other particle and eukaryote-associated bacteria (e.g., Flavobacteriales and Pseudoalteromonas). Poisoned trap microbial assemblages were enriched in Vibrio and Campylobacterales likely associated with eukaryotic surfaces and intestinal tracts as symbionts, pathogens, or saprophytes. The functional gene content of microbial assemblages in poisoned traps included a variety of genes involved in virulence, anaerobic metabolism, attachment to chitinaceaous surfaces, and chitin degradation. The presence of chitinaceaous surfaces was also accompanied by the co-existence of bacteria which encoded the capacity to attach to, transport and metabolize chitin and its derivatives. Distinctly different microbial assemblages predominated in live traps, which were largely represented by copiotrophs and eukaryote-associated bacterial communities. Predominant sediment trap-assocaited eukaryotic phyla included Dinoflagellata, Metazoa (mostly copepods), Protalveolata, Retaria, and Stramenopiles. In conclusion, these data indicate the central role of eukaryotic taxa in structuring sinking particle microbial assemblages, as well as the rapid responses of indigenous microbial species in the degradation of marine particulate organic matter (POM) in situ in the ocean's interior.« less

An Ecological Tipping Point Defined by Shallow Marine Foraminifera in the latest Paleocene

NASA Astrophysics Data System (ADS)

Robinson, M. M.; Spivey, W.

2016-12-01

The Paleocene-Eocene Thermal Maximum (PETM) is recognized in marine sediments by a carbonate dissolution zone, the extinction or turnover of benthic taxa, and a radiation of planktic excursion taxa, all accompanied by a rapid-onset, negative carbon isotope excursion (CIE). We present foraminiferal evidence from shallow marine sediments in southeastern Maryland, USA, where accumulation rates are high, for a minor ocean acidification event in the latest Paleocene that coincides with a relatively small (-2‰) CIE. This pre-onset excursion (POE) precedes the larger (-4‰) PETM CIE onset and dissolution event. During the POE, the benthic assemblage is reconfigured toward agglutinated species in order to adapt to increased acidity, and the planktic assemblage begins to speciate due to perturbed mixed layer conditions. The benthic assemblage returns to normal, without interruption, as the POE recovers, but planktic excursion taxa continue to appear in very low numbers. This is contrasted to the major ocean acidification event associated with the PETM CIE onset that results in a zone of complete dissolution followed by distinctive benthic and planktic foraminiferal assemblages. Our microfossil evidence documents a biotic response to bottom water and mixed layer perturbations that illustrates how coastal ecosystems react to both moderate and severe ocean acidification events, bracketing the ecological tipping point of shallow marine ecosystems. The POE, roughly half the magnitude of the CIE onset, provides insight into the nature of the initial effects of climate perturbation as well as an example of one that is fully recoverable. It is here that research aimed to better understand the long-term effects and reversibility of modern deteriorating oceanic conditions should focus. This study provides an initial metric by which to measure modern ecosystem disturbances and will help to define the tipping point for the shallow marine environment.

Using macroinvertebrate assemblages and multiple stressors to infer urban stream system condition: A case study in the central US

USGS Publications Warehouse

Nichols, John W.; Hubbart, Jason A.; Poulton, Barry C.

2016-01-01

Characterizing the impacts of hydrologic alterations, pollutants, and habitat degradation on macroinvertebrate species assemblages is of critical value for managers wishing to categorize stream ecosystem condition. A combination of approaches including trait-based metrics and traditional bioassessments provides greater information, particularly in anthropogenic stream ecosystems where traditional approaches can be confounded by variously interacting land use impacts. Macroinvertebrates were collected from two rural and three urban nested study sites in central Missouri, USA during the spring and fall seasons of 2011. Land use responses of conventional taxonomic and trait-based metrics were compared to streamflow indices, physical habitat metrics, and water quality indices. Results show that biotic index was significantly different (p < 0.05) between sites with differences detected in 54 % of trait-based metrics. The most consistent response to urbanization was observed in size metrics, with significantly (p < 0.05) fewer small bodied organisms. Increases in fine streambed sediment, decreased submerged woody rootmats, significantly higher winter Chloride concentrations, and decreased mean suspended sediment particle size in lower urban stream reaches also influenced macroinvertebrate assemblages. Riffle habitats in urban reaches contained 21 % more (p = 0.03) multivoltine organisms, which was positively correlated to the magnitude of peak flows (r2 = 0.91, p = 0.012) suggesting that high flow events may serve as a disturbance in those areas. Results support the use of macroinvertebrate assemblages and multiple stressors to characterize urban stream system condition and highlight the need to better understand the complex interactions of trait-based metrics and anthropogenic aquatic ecosystem stressors.

Structuring factors and recent changes in subtidal macrozoobenthic communities of a coastal lagoon, Arcachon Bay (France)

NASA Astrophysics Data System (ADS)

Blanchet, Hugues; de Montaudouin, Xavier; Chardy, Pierre; Bachelet, Guy

2005-09-01

Fourteen years after a previous investigation in Arcachon Bay (SW France), the quantitative distribution of subtidal macrozoobenthic communities was assessed in 2002 through a stratified sampling strategy involving a larger number of stations (89 vs. 18) than in 1988. A total of 226 taxa were recorded. Cluster Analysis and Correspondence Analysis identified nine station groups corresponding to benthic faunal assemblages and their characteristic species. Multiple Discriminant Analysis showed that the main environmental factors influencing the distribution of faunal assemblages were sediment parameters and distance from the ocean. Depth was a minor structuring factor. At the scale of the lagoon, biogenic structures such as Zostera marina beds, Crepidula fornicata-dominated bottoms or dead oyster shell bottoms did not display any particular assemblage of infauna. Comparison with previous quantitative data from the 1988 survey provided more precision on the distribution of benthic assemblages and revealed community changes at a 14-year scale. These modifications reflected a general increase of silt and clay content in the sediment in the internal parts of channels, inducing community change. These changes can be correlated to the recent first signs of a moderate eutrophication process which have appeared, since 1988, through the development of green macroalgae in some parts of the lagoon. This trend was enhanced in transverse channels with reduced hydrodynamics and led to muddy areas where green macroalgae tended to accumulate. Locally, the dredging of sandbanks induced stronger currents and allowed the marine influence to occur, and also induced community change. These observations confirm that surveys of macrobenthic communities are useful tools to assess coastal ecosystem change even in moderately disturbed environments.

Physical factors affecting the abundance and species richness of fishes in the shallow waters of the southern Bothnian Sea (Sweden)

NASA Astrophysics Data System (ADS)

Thorman, Staffan

1986-03-01

The relationship between the composition of the fish assemblages and the abiotic environment in seven shallow areas within the same geographical range in the southern Bothnian Sea were studied in May, July, September and November 1982. Eighteen species were found in the areas and the major species were Pungitius pungitius (L.), Pomatoschistus minutus (Pallas), Gasterosteus aculeatus (L.), Phoxinus phoxinus (L.), Pomatoschistus microps (Krøyer) and Gobius niger L. The main purpose of the study was to examine the possible effects of exposure, organic contents in sediments and habitat heterogeneity on species richness and abundance of the assemblages. There was a negative correlation between the organic contents of the sediment and exposure. There were no significant correlations between exposure, organic contents, size of the areas and species numbers but habitat heterogeneity was positively correlated with species number. There were no correlations between fish abundance and heterogeneity of the areas. Negative correlations occurred between the exposure of the areas and fish abundance. The amounts of the pooled benthic fauna were negatively correlated to the exposure. The species/area hypothesis finds no support in the results, because there was no correlation between habitat heterogeneity of an area and its size. The effective fetch combined with the heterogeneity measurement of the areas seemed to be useful indicators of the species composition and fish abundance. Habitat heterogeneity and exposure were the most important structuring factors of these shallow water fish assemblages during the ice-free period and within the local geographical range. The assemblages consist of a mixture of species with marine or limnic origin and they have probably not evolved in the Bothnian Sea or together. They are most likely regulated by their physiological plasticity and not by interactions with other species.

Depth and Medium-Scale Spatial Processes Influence Fish Assemblage Structure of Unconsolidated Habitats in a Subtropical Marine Park

PubMed Central

Schultz, Arthur L.; Malcolm, Hamish A.; Bucher, Daniel J.; Linklater, Michelle; Smith, Stephen D. A.

2014-01-01

Where biological datasets are spatially limited, abiotic surrogates have been advocated to inform objective planning for Marine Protected Areas. However, this approach assumes close correlation between abiotic and biotic patterns. The Solitary Islands Marine Park, northern NSW, Australia, currently uses a habitat classification system (HCS) to assist with planning, but this is based only on data for reefs. We used Baited Remote Underwater Videos (BRUVs) to survey fish assemblages of unconsolidated substrata at different depths, distances from shore, and across an along-shore spatial scale of 10 s of km (2 transects) to examine how well the HCS works for this dominant habitat. We used multivariate regression modelling to examine the importance of these, and other environmental factors (backscatter intensity, fine-scale bathymetric variation and rugosity), in structuring fish assemblages. There were significant differences in fish assemblages across depths, distance from shore, and over the medium spatial scale of the study: together, these factors generated the optimum model in multivariate regression. However, marginal tests suggested that backscatter intensity, which itself is a surrogate for sediment type and hardness, might also influence fish assemblages and needs further investigation. Species richness was significantly different across all factors: however, total MaxN only differed significantly between locations. This study demonstrates that the pre-existing abiotic HCS only partially represents the range of fish assemblages of unconsolidated habitats in the region. PMID:24824998

Pre-, syn-, and postcollisional stratigraphic framework and provenance of upper triassic-upper cretaceous strata in the northwestern talkeetna mountains, alaska

USGS Publications Warehouse

Hampton, B.A.; Ridgway, K.D.; O'Neill, J. M.; Gehrels, G.E.; Schmidt, J.; Blodgett, R.B.

2007-01-01

Mesozoic strata of the northwestern Talkeetna Mountains are located in a regional suture zone between the allochthonous Wrangellia composite terrane and the former Mesozoic continental margin of North America (i.e., the Yukon-Tanana terrane). New geologic mapping, measured stratigraphic sections, and provenance data define a distinct three-part stratigraphy for these strata. The lowermost unit is greater than 290 m thick and consists of Upper Triassic-Lower Jurassic mafic lavas, fossiliferous limestone, and a volcaniclastic unit that collectively we informally refer to as the Honolulu Pass formation. The uppermost 75 m of the Honolulu Pass formation represent a condensed stratigraphic interval that records limited sedimentation over a period of up to ca. 25 m.y. during Early Jurassic time. The contact between the Honolulu Pass formation and the overlying Upper Jurassic-Lower Cretaceous clastic marine strata of the Kahiltna assemblage represents a ca. 20 m.y. depositional hiatus that spans the Middle Jurassic and part of Late Jurassic time. The Kahiltna assemblage may to be up to 3000 m thick and contains detrital zircons that have a robust U-Pb peak probability age of 119.2 Ma (i.e., minimum crystallization age/maximum depositional age). These data suggest that the upper age of the Kahiltna assemblage may be a minimum of 10-15 m.y. younger than the previously reported upper age of Valanginian. Sandstone composition (Q-43% F-30% L-27%-Lv-71% Lm-18% Ls-11%) and U-Pb detrital zircon ages suggest that the Kahiltna assemblage received igneous detritus mainly from the active Chisana arc, remnant Chitina and Talkeetna arcs, and Permian-Triassic plutons (Alexander terrane) of the Wrangellia composite terrane. Other sources of detritus for the Kahiltna assemblage were Upper Triassic-Lower Jurassic plutons of the Taylor Mountains batholith and Devonian-Mississippian plutons; both of these source areas are part of the Yukon-Tanana terrane. The Kahiltna assemblage is overlain by previously unrecognized nonmarine strata informally referred to here as the Caribou Pass formation. This unit is at least 250 m thick and has been tentatively assigned an Albian-Cenomanian-to-younger age based on limited palynomorphs and fossil leaves. Sandstone composition (Q-65% F-9% L-26%-Lv-28% Lm-52% Ls-20%) from this unit suggests a quartz-rich metamorphic source terrane that we interpret as having been the Yukon-Tanana terrane. Collectively, provenance data indicate that there was a fundamental shift from mainly arc-related sediment derivation from sources located south of the study area during Jurassic-Early Cretaceous (Aptian) time (Kahiltna assemblage) to mainly continental margin-derived sediment from sources located north and east of the study area by Albian-Cenomanian time (Caribou Pass formation). We interpret the threepart stratigraphy defined for the northwestern Talkeetna Mountains to represent pre- (the Honolulu Pass formation), syn- (the Kahiltna assemblage), and post- (the Caribou Pass formation) collision of the Wrangellia composite terrane with the Mesozoic continental margin. A similar Mesozoic stratigraphy appears to exist in other parts of south-central and southwestern Alaska along the suture zone based on previous regional mapping studies. New geologic mapping utilizing the three-part stratigraphy interprets the northwestern Talkeetna Mountains as consisting of two northwest-verging thrust sheets. Our structural interpretation is that of more localized thrust-fault imbrication of the three-part stratigraphy in contrast to previous interpretations of nappe emplacement or terrane translation that require large-scale displacements. Copyright ?? 2007 The Geological Society of America.

Late Quarternary Sedimentation in the Eastern Angola Basin.

DTIC Science & Technology

1973-11-01

Angola diapir field. Illite and montmorillonite are abundant in the southern part of the basin, reflecting the source in soils of South West Africa and...northward transport in the Benguela Current system. Kaolinite dominates the clay-mineral assemblage in the north-central part of the basin

Regional Sediment Management (RSM) Strategy for Mobile Bay, Alabama

DTIC Science & Technology

2015-04-01

shrimp , eastern oyster, and blue crab. In terms of the entire fishery assemblages, white shrimp was the numerically dominant species captured in Brookley...Brookley Hole, threadfin shad was the third most dominant species. Commercially important shellfish taken at both sites include both brown and white

Localized effects of coal mine drainage on fish assemblages in a Cumberland Plateau stream in Tennessee

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schorr, M.S.; Backer, J.C.

2006-03-15

The upper watershed of North Chickamauga Creek (NCC), a fourth-order tributary to the Tennessee River, Tennessee, has been impacted by decades of acid mine drainage (AMD) from abandoned coal mines. We assessed fish assemblages, pH, conductivity, and sediment coverage at 12 study reaches (six AMD sites and six reference sites) in the Cumberland Plateau region of the NCC system, May-September 1998. Stream pH increased (3.6 to 6.0) and conductivity decreased (296 to 49 {mu}S/cm) downstream of the AMD-impacted area; however, no discernable gradient was observed in sediment cover. Elevated conductivity at AMD-impacted sites reflected increased concentrations of dissolved metals andmore » other inorganic ions. Reference sites exhibited higher pH (6.0-6.4) and lower conductivity (13-28 {mu}S/cm). Acidified reaches were characterized by low fish species richness and abundance; no fish were observed at sites where the mean pH was {lt} 5. Centrarchids (mostly bluegill (Lepomis macrochirus) and green sunfish (L. cyanellus)) comprised {gt} 90 % of the catch at AMD sites, whereas cypriniids (creek chub (Semotilus atromaculatus) and blacknose dace (Rhinichthys atratulus)) accounted for {gt} 90 % of the catch at reference sites. Findings from this study document the negative effects of acid drainage from coal mines on fish assemblages in a Cumberland Plateau stream.« less

Zonation and structuring factors of meiofauna communities in a tropical seagrass bed (Gazi Bay, Kenya)

NASA Astrophysics Data System (ADS)

De Troch, Marleen; Gurdebeke, Shirley; Fiers, Frank; Vincx, Magda

2001-02-01

This study deals with the relation between tropical meiofauna and environmental variables by comparing the 'benthic' (i.e. in the bare sediment adjacent to seagrass plants) and the 'epiphytic' (i.e. in samples including seagrass plants) meiofauna associated with five seagrass species from the high intertidal to the high subtidal zone in Gazi Bay (Kenya). Ordination and variance analysis revealed three distinct 'benthic' and two 'epiphytic' meiofauna assemblages. These assemblages corresponded entirely with those identified for the seagrass species: a high intertidal pioneer association ( Halophila ovalis/ Halodule wrightii), an intertidal climax assemblage ( Thalassia hemprichii) and a high subtidal pioneer association ( Halophila stipulacea/ Syringodium isoetifolium). These data support the hypothesis that meiofaunal communities correspond to the characteristic zonation of the seagrass vegetation in Gazi Bay. In beds of the pioneer seagrass species, the close relationship between sediment characteristics and both 'benthic' and 'epiphytic' meiofauna communities suggests that these pioneer communities were mainly driven by physical factors. The 'benthic' communities adjacent to the climax seagrass species T. hemprichii were more structured by biogenic factors, e.g. % TOM, chlorophyll a and c, fucoxanthin, habitat complexity and growth form of the seagrass species. For its associated 'epiphytic' meiofauna the latter conclusion was even more striking. These data corroborate the importance of physical factors in disturbed environments (intertidal zone, near pioneer seagrasses) and of biotic factors in more stable conditions (subtidal zone, near climax seagrasses).

Miocene transgression in the central and eastern parts of the Sivas Basin (Central Anatolia, Turkey) and the Cenozoic palaeogeographical evolution

NASA Astrophysics Data System (ADS)

Poisson, André; Vrielynck, Bruno; Wernli, Roland; Negri, Alessandra; Bassetti, Maria-Angela; Büyükmeriç, Yesim; Özer, Sacit; Guillou, Hervé; Kavak, Kaan S.; Temiz, Haluk; Orszag-Sperber, Fabienne

2016-01-01

We present here a reappraisal of the tectonic setting, stratigraphy and palaeogeography of the central part of the Sivas Basin from Palaeocene to late Miocene. The Sivas Basin is located in the collision zone between the Pontides (southern Eurasia) and Anatolia (a continental block rifted from Gondwana). The basin overlies ophiolites that were obducted onto Anatolia from Tethys to the north. The Central Anatolian Crystalline Complex (CACC) experienced similar ophiolite obduction during Campanian time, followed by exhumation and thrusting onto previously emplaced units during Maastrichtian time. To the east, crustal extension related to exhumation of the CACC created grabens during the early Tertiary, including the Sivas Basin. The Sivas Basin underwent several tectonic events during Paleogene-Neogene. The basin fill varies, with several sub-basins, each being characterised by a distinctive sequence, especially during Oligocene and Miocene. Evaporite deposition in the central part of the basin during early Oligocene was followed by mid-late Oligocene fluvio-lacustrine deposition. The weight of overlying fluvial sediments triggered salt tectonics and salt diapir formation. Lacustrine layers that are interbedded within the fluviatile sediments have locally yielded charophytes of late Oligocene age. Emergent areas including the pre-existing Sivas Basin and neighbouring areas were then flooded from the east by a shallow sea, giving rise to a range of open-marine sub-basins, coralgal reef barriers and subsiding, restricted-marine sub-basins. Utilising new data from foraminifera, molluscs, corals and nannoplankton, the age of the marine transgression is reassessed as Aquitanian. Specifically, age-diagnostic nannoplankton assemblages of classical type occur at the base of the transgressive sequence. However, classical stratigraphic markers have not been found within the planktic foraminiferal assemblages, even in the open-marine settings. In the restricted-marine sediments, there are rich planktic foraminiferal assemblages of classical type but these are of little use in stratigraphy. In contrast, the gastropod fauna indicate a Burdigalian age. Sediment reworking in the restricted-marine environments precludes stratigraphic determination. In such environments, micro- and nano-organisms experienced atypical developmental conditions. The small benthic foraminifera and associated ostracod assemblages are good indicators of salinity which varied considerably within the restricted-marine sub-basins. Some of the corals within the coralgal reefs barriers are also dated as Aquitanian. A combination of the salt tectonics and the late Miocene north-westward-verging thrusting created the present basin complexity.

Dust fluxes linked to intensification of Prevailing Westerlies and Trade Winds stimulated Ethmodiscus rex giant diatom blooms in the southern Mariana Trench, western tropical Pacific at onset of the Last Glacial Maximum

NASA Astrophysics Data System (ADS)

Chen, D.; Luo, M.; Algeo, T. J.; Chen, L.

2017-12-01

The strontium (Sr) and neodymium (Nd) isotope compositions and clay-mineral assemblages of the detrital fraction of sediments in the southern Mariana Trench together with major- and trace-elements concentrations of bulk sediments have been determined to trace the sediment provenance and investigate the relationship between Asian dust input and blooms of the giant diatom Ethmodiscus rex. Enrichment of barium (Ba) in relative to upper continental crust (UCC) and low average Rb/K ratios in all study cores point to both hydrothermal and volcaniclastic inputs to the sediments. Both the Sr-Nd isotope compositions and the clay-mineral assemblages of the detrital fraction reflect a two-component mixing system consisting of Mariana arc volcaniclastics and eolian Asian dust. A decrease in smectite content and an increase in illite content just before formation of laminated diatom mats (LDMs) suggest a change in the source of the eolian dust from eastern Asian deserts (EADs) to central Asian deserts (CADs) at the onset of the Last Glacial Maximum (LGM). This observation suggests a causal linkage between atmospheric circulation patterns, the sources of eolian Asian dust, and marine productivity in the western Pacific region. We postulate that the shift to CAD-sourced dust may have played a greater role in promoting biological productivity in the oligotrophic western Pacific Ocean during the LGM than previously realized.

Changing Abundance of Magnetofossil Morphologies in Pelagic Red Clay Around Minamitorishima, Western North Pacific

NASA Astrophysics Data System (ADS)

Usui, Yoichi; Yamazaki, Toshitsugu; Saitoh, Masafumi

2017-12-01

Recent investigations have discovered an unexpected abundance of magnetofossils in oxic pelagic red clays. These have potential to serve as paleoenvironmental tracers in otherwise nonfossiliferous sediments. Here, we report on variations in the abundance and morphology of magnetofossils in red clay from the western North Pacific. Magnetic measurements revealed that magnetofossils dominate the magnetic mineral assemblage of the sediments. An endmember analysis of isothermal remanent magnetization acquisition curves, supplemented by an analysis of S ratios, indicates that the magnetic assemblage can be unmixed into three endmembers, two corresponding to magnetofossils and one to terrigenous magnetic minerals. Direct counting of magnetofossil morphologies under a transmission electron microscope shows that the two magnetofossil endmembers differentiate equant magnetofossils and bullet-shaped magnetofossils, respectively. The stratigraphic variation of the endmember contributions revealed that the equant magnetofossils are dominant for the most part, while an interval at around 7 m in core depth shows higher abundance of the bullet-shaped magnetofossils. This may reflect enhanced organic carbon flux to the sediments. The organic carbon content is low throughout the sediments, and it does not show any change corresponding to the increase of bullet-shaped magnetofossils, pointing at extensive remineralization of the organic carbon. On the basis of lithostratigraphic correlation to nearby drilling sites, we tentatively estimate the age of the bullet-shaped magnetofossil increase as sometime between ˜75 and 25 Ma. These results suggest that environmental information can be obtained from magnetofossils in pelagic red clay.

Influence of macrofaunal assemblages and environmental heterogeneity on microphytobenthic production in experimental systems

PubMed Central

Dyson, Kirstie E; Bulling, Mark T; Solan, Martin; Hernandez-Milian, Gema; Raffaelli, David G; White, Piran C.L; Paterson, David M

2007-01-01

Despite the complexity of natural systems, heterogeneity caused by the fragmentation of habitats has seldom been considered when investigating ecosystem processes. Empirical approaches that have included the influence of heterogeneity tend to be biased towards terrestrial habitats; yet marine systems offer opportunities by virtue of their relative ease of manipulation, rapid response times and the well-understood effects of macrofauna on sediment processes. Here, the influence of heterogeneity on microphytobenthic production in synthetic estuarine assemblages is examined. Heterogeneity was created by enriching patches of sediment with detrital algae (Enteromorpha intestinalis) to provide a source of allochthonous organic matter. A gradient of species density for four numerically dominant intertidal macrofauna (Hediste diversicolor, Hydrobia ulvae, Corophium volutator, Macoma balthica) was constructed, and microphytobenthic biomass at the sediment surface was measured. Statistical analysis using generalized least squares regression indicated that heterogeneity within our system was a significant driving factor that interacted with macrofaunal density and species identity. Microphytobenthic biomass was highest in enriched patches, suggesting that nutrients were obtained locally from the sediment–water interface and not from the water column. Our findings demonstrate that organic enrichment can cause the development of heterogeneity which influences infaunal bioturbation and consequent nutrient generation, a driver of microphytobenthic production. PMID:17698480

Ichnological analysis of the Upper Miocene in the ANH-Tumaco-1-ST-P well: assessing paleoenvironmental conditions at the Tumaco Basin, in the Colombian Pacific

NASA Astrophysics Data System (ADS)

Giraldo-Villegas, Carlos A.; Celis, Sergio A.; Rodríguez-Tovar, Francisco J.; Pardo-Trujillo, Andrés; Vallejo-Hincapié, Diego F.; Trejos-Tamayo, Raúl A.

2016-11-01

Tumaco is a frontier basin located on the SW Colombian Pacific coast. It is composed of a thick siliciclastic sequence up to reach 10,000 m-thick. In recent years, the National Hydrocarbon Agency-ANH has promoted new exploration wells in order to understand the sedimentary dynamic and its relationship with petroleum systems. One of them, the ANH-Tumaco-1-ST-P well has ∼3000 m (12,000 feet). We carried out sedimentological, geochemical, and micropaleontological detailed analyses with special attention to the ichnology on a 55 m-cored interval (from 1695.3 to 1640.4 m = 5563-5382 ft) in order to assess paleoenvironmental conditions. Beds are composed of green and gray mudrocks interbedded with lithic sandstones and fine-grained tuffs. Calcareous microfossil assemblages defined by the recovery of Uvigerina carapitana, Uvigerina laviculata, Uvigerina pigmaea, Globigerina woodi, Globigerionoides obliquus, Discoaster bellus gr., Catinaster coalitus, Reticulofenestra pseudoumbilicus and Sphenolithus abies indicated a Tortonian age, between CN6/CN7 biozones. Six sedimentary facies were identified: (1, 2) massive and laminated mudrocks, (3, 4) massive and normal-graded sandstones, (5) heterolithic beds, and in some cases (6) sandstones with soft-deformation structures. These rocks were accumulated in a shallowing platform-prodelta environment with continuous volcanic influence. Ichnotaxonomic analysis, conducted for the first time in the Colombian Pacific, allowed the identification of eighteen ichnogenera: Alcyonidiopsis, Asterosoma, Chondrites, Conichnus, Cylindrichnus, Diplocraterion, Ophiomorpha, Palaeophycus, Phycosiphon, Planolites, Rhyzocorallium, Schaubcylindrichnus, Scolicia, Siphonichnus, Taeinidum, Teichichnus, Thalassinoides, and Zoophycos. The ichnological association belongs to the archetypal Cruziana ichnofacies and its "distal" expression. By integrating lithofacies and ichnological results, two segments have been distinguished: 1) the lower one (1695.3-1677.1 m) dominated by massive and laminated mudrocks and 1 to 6 ichnofabric indexes and, 2) the upper segment (1677.1-1640.4 m) characterized by the increase of the sandstone facies, and ichnofabric indexes from 1 to 5. Along these segments, four ichnofabrics have been identified: 1) Phycosiphon-Planolites, 2) Planolites-Thalassinoides, 3) Zoophycos-Chondrites, and 4) Phycosiphon-Thalassinoides, reflecting stable sedimentary conditions with low-moderate energy, low-moderate sedimentation rates, and dominant aerobic facies. Minor variations in these parameters (sedimentation rate, energy conditions, substrate consistency, oxygenation and organic matter), however, induced changes in the macrobenthic tracemaker community, and consequently in the registered trace fossil assemblages.

Predicting the sinkage of a moving tracked mining vehicle using a new rheological formulation for soft deep-sea sediment

NASA Astrophysics Data System (ADS)

Xu, Feng; Rao, Qiuhua; Ma, Wenbo

2018-03-01

The sinkage of a moving tracked mining vehicle is greatly affected by the combined compression-shear rheological properties of soft deep-sea sediments. For test purposes, the best sediment simulant is prepared based on soft deep-sea sediment from a C-C poly-metallic nodule mining area in the Pacific Ocean. Compressive creep tests and shear creep tests are combined to obtain compressive and shear rheological parameters to establish a combined compressive-shear rheological constitutive model and a compression-sinkage rheological constitutive model. The combined compression-shear rheological sinkage of the tracked mining vehicle at different speeds is calculated using the RecurDyn software with a selfprogrammed subroutine to implement the combined compression-shear rheological constitutive model. The model results are compared with shear rheological sinkage and ordinary sinkage (without consideration of rheological properties). These results show that the combined compression-shear rheological constitutive model must be taken into account when calculating the sinkage of a tracked mining vehicle. The combined compression-shear rheological sinkage decrease with vehicle speed and is the largest among the three types of sinkage. The developed subroutine in the RecurDyn software can be used to study the performance and structural optimization of moving tracked mining vehicles.

Biozone Characterization of Foraminifera in Upper Pleistocene through Recent Shelf and Slope Sediments, Northern Gulf of Alaska: Integration of SHE-diversity and Polytopic Vector Analyses

NASA Astrophysics Data System (ADS)

Zellers, S.; Cowan, E. A.; Davies, M. H.

2014-12-01

Gulf of Alaska sediments contain distinct, low-diversity assemblages of benthic and planktic foraminifera, whose distribution is a function of food availability, water mass properties, ice proximity, transport/deposition, predation, and taphonomic processes. Spatial and temporal changes in diversity reflect these processes and provide insight into this margin's history. Two quantitative techniques are integrated to define and characterize benthic foraminferal biozones in Gulf of Alaska sediment core samples collected by the R/V Maurice Ewing in 2004 at shelf site EW0408-79JC (59.53° N, 141.76° W, 158 m depth), and slope site EW0408-85JC (59.56° N, 144.15° W, 682 m depth). Sediments date from the end of the most recent glaciation (diamict in 85JC) to the present (bioturbated, silty clay at both sites). We apply SHE analysis, a graphical, iterative technique, based on diversity trends in a plot of ln E vs. ln N, where E is species evenness and N is cumulative number of specimens. In each step, the plot is examined for the first change in slope between successive samples, representing a change in diversity. At this point a boundary is defined, samples before the break are removed, and the analysis is repeated until all samples are analyzed. Data are further analyzed using an unmixing algorithm known as polytopic vector analyses. This technique defines a small number of orthogonal end members that explain a majority of the variance, thus reducing data complexity and aiding interpretation. SHE-analysis of benthic foraminiferal data defines eighteen informal abundance biozones. Polytopic vector analyses indicate that the faunal assemblages reflect mixtures of up to seven distinct biofacies: outer neritic (2), upper bathyal (2), reduced oxygen (2), and inner neritic. Rapid changes in faunal diversity correspond with increased sedimentation rates, especially during the end of the most recent glaciation (17 to 16 ka). The same relationship occurs over the last 1000 years at the shelf site. Where the cores overlap in age, many more assemblage boundaries occur in the shelf core, suggesting a comparatively dynamic environment relative to the slope. The least amount of diversity change corresponds with the laminated intervals in 85JC, coincident with high productivity and development of anoxia during regional deglaciation.

Expanded record of Quaternary oceanographic change: Amerasian Arctic Ocean

USGS Publications Warehouse

Ishman, S.E.; Polyak, L.V.; Poore, R.Z.

1996-01-01

Four sediment cores collected from the Northwind and Mendeleyev ridges, Arctic Ocean, from 1089 m to 1909 m water depth, provide an oceanographic record extending back into the Matuyama reversed polarity chron. Benthic foraminiferal analyses show four prominent assemblage zones: Bolivina arctica, Cassidulina teretis, Bulimina aculeata, and Oridorsalis tener from the upper Matuyama reversed polarity chronozone through the Brunhes normal polarity chronozone. These assemblage zones represent depth-dependent benthic foraminiferal biofacies changes associated with oceanographic events that occurred in the Amerasian basin at ??? 780 and 300 ka, and indicate oceanographic influence from the North Atlantic. Recognition of these benthic assemblage zones in Arctic cores from the Alpha Ridge indicates that the benthic foraminiferal zonations in intermediate to deep water (>1000 m) Arctic cores may be more useful than preexisting lithostratigraphic zonations and should provide important information pertaining to the Quaternary paleoceanographic evolution of the Arctic Ocean.

Sediment-peridotite interactions in a thermal gradient: mineralogic and geochemical effects and the "sedimentary signature" of arc magmas

NASA Astrophysics Data System (ADS)

Woodland, Alan; Girnis, Andrei; Bulatov, Vadim; Brey, Gerhard; Höfer, Heidi; Gerdes, Axel

2017-04-01

Strong thermal and chemical gradients are characteristic of the slab-mantle interface in subduction zones where relatively cold sediments become juxtaposed with hotter peridotite of the mantle wedge. The formation of arc magmas is directly related to mass transfer processes under these conditions. We have undertaken a series of experiments to simulate interactions and mass transfer at the slab-mantle interface. In addition to having juxtaposed sediment and peridotite layers, the experiments were performed under different thermal gradients. The sediment had a composition similar to GLOSS (1) and also served as the source of H2O, CO2 and a large selection of trace elements. The peridotite was a depleted garnet harzburgite formed from a mixture of natural hand-picked olivine, opx and garnet. Graphite was added to this mixture to establish a redox gradient between the two layers. Experiments were performed at 7.5-10 GPa to simulate the processes during deep subduction. The thermal gradient was achieved by displacing the sample capsule (Re-lined Pt) from the center of the pressure cell. The gradient was monitored with separate thermocouples at each end of the capsule and by subsequent opx-garnet thermometry across the sample. Maximum temperatures varied from 1400˚ -900˚ C and gradients ranged from 200˚ -800˚ C. Thus, in some experiments melting occurred in the sediment layer and in others this layer remained subsolidus, only devolatilizing. Major and trace elements were transported both in the direction of melt percolation to the hot zone, as well as down temperature. This leads to the development of zones with discrete phase assemblages. Olivine in the peridotite layer becomes converted to orthopyroxene, which is due to Si addition, but also migration of Mg and Fe towards the sediment. In the coldest part of a sample, the sediment is converted into an eclogitic cpx + garnet assemblage. A thin zone depleted in almost all trace elements is formed in peridotite directly above the sediment/peridotite boundary and defines the region of maximum metasomatic alteration. With a low Tmin, fluid-mobile Ba, Rb, Sr and Li are more strongly transported into the melt zone compared to HFSE and REE. At Tmin > 700˚ C, all incompatible elements are extracted from the solid into the melt. However, the mineral assemblage controls which elements are held back in the solid residue (i.e. MREE, HREE, Y, Sc, and to a lesser extent Ti, Zr and Hf in garnet). Peridotite-sediment interaction can produce humite-group minerals, particularly in the presence of F. Negative Nb-Ta anomalies are caused by rutile and/or humite phases. Transport of melt or fluid from the sediment to the overlying mantle wedge produces metasomatized magma sources from which basaltic melts with sedimentary geochemical signatures can be derived. Adding even 1% of melt or fluid to depleted mantle peridotite is sufficient to produce basaltic melts with incompatible element contents similar to those observed in natural subduction-related magmas. Such signatures are retained at 6.5 and even 10 GPa when Tmin < 700˚ C. Plank, T., Langmuir C., 1998. Chem. Geol. 145, 325-394.

Epibenthic communities of sedimentary habitats in a NE Atlantic deep seamount (Galicia Bank)

NASA Astrophysics Data System (ADS)

Serrano, A.; Cartes, J. E.; Papiol, V.; Punzón, A.; García-Alegre, A.; Arronte, J. C.; Ríos, P.; Lourido, A.; Frutos, I.; Blanco, M.

2017-12-01

Galicia Bank is a deep seamount included as Site of Community Importance (SCI) in the Spanish Natura 2000 Network proposal. In the present study, epibenthic assemblages of sedimentary habitats have been described, together with the main environmental factor explaining species and communities distribution. Five epibenthic assemblages have been identified. Depth was the main factor explaining assemblage distribution, and the role of sediment type, water masses, and coral framework presence is also discussed. Three assemblages are located in the summit: the shallowest one (730-770 m), in the boundary between Eastern North Atlantic Central Water (ENACW) and Mediterranean Overflow Water (MOW) water masses is typified by ophiuroids and characterized by medium sands. The second assemblage (770-800 m) typified by the bivalve Limopsis minuta and the solitary coral Flabellum chunii correspond with medium sands and MOW core; and the third typified by the presence of cold-water coral communities dominated by Lophelia pertusa and Madrepora oculata, also on the MOW influence. In the border of the summit, in the bank break, an assemblage located in the range 1000-1200 m is dominated by the urchin Cidaris cidaris and the sponge Thenea muricata. In the flat flanks around the bank, the deepest assemblage (1400-1800 m) is dominated by the holothurian Benthogone rosea, in a depth range dominated by the Labrador water (LSW) and in fine sands with highest contents of organic matter. Most of species appeared in a depth range smaller than 25% of total depth range sampled and in < 10% of samples. Differential preference of species is evident in the different trophic guilds, with a higher dominance of filter-feeders in the summit and of deposit-feeders in the deepest assemblage, and have clear links with nutrient dynamics in the bank.

Temporal assemblage turnovers of intertidal foraminiferal communities from tropical (SE Caribbean) and temperate (NE England and SW Spain) regions

NASA Astrophysics Data System (ADS)

Costelloe, Ashleigh; Wilson, Brent; Horton, Benjamin P.; Hayek, Lee-Ann C.

2018-05-01

This is the first quantitative study of temporal assemblage turnovers of the relationships between intertidal foraminifera. Time series datasets collected from tropical Caroni Swamp and Claxton Bay (Trinidad, SE Caribbean) and temperate Cowpen Marsh (NE England, U.K.) and Bay of Cadiz (SW Spain) were used. The assemblage turnover index (ATI) examined species interrelationships through comparisons of monthly or biweekly species proportional abundances over one or two years. Species contributing to major assemblage turnovers (ATI > x + σ) were identified using the conditioned on-boundary index (CoBI). Foraminiferal species are heterogeneously distributed within the sediment; multiple sample stations at a study location cumulatively represent the foraminiferal metacommunity and clusters represent foraminiferal assemblages. The ATI and CoBI were applied to the proportional abundances of live specimens recorded for the metacommunity and assemblages at each location. At Caroni Swamp and Claxton Bay, major assemblage turnovers were driven by the most abundant species and the majority coincided with seasonal change or the arrival of the seasonal Orinoco plume in the Gulf of Paria. Seasonal turnovers of the foraminiferal metacommunities at temperate Cowpen Marsh and Bay of Cádiz occurred during the summer and winter. Major assemblage turnovers in the upper Cowpen Marsh occurred in the summer, and the lower marsh in the winter. Foraminiferans are useful bioindicators for monitoring the health of coastal environments. Understanding foraminiferal population dynamics will allow cyclical changes to be differentiated from abrupt and persistent changes, which are related to anthropogenic disturbances or long-term climate change. The ATI and CoBI are useful indices for quantitatively exploring relationships of foraminiferal populations over time.

Modelling potential impacts of bottom trawl fisheries on soft sediment biogeochemistry in the North Sea†

PubMed Central

Duplisea, Daniel E; Jennings, Simon; Malcolm, Stephen J; Parker, Ruth; Sivyer, David B

2001-01-01

Bottom trawling causes physical disturbance to sediments particularly in shelf areas. The disturbance due to trawling is most significant in deeper areas with softer sediments where levels of natural disturbance due to wave and tidal action are low. In heavily fished areas, trawls may impact the same area of seabed more than four times per year. A single pass of a beam trawl, the heaviest gear routinely used in shelf sea fisheries, can kill 5–65% of the resident fauna and mix the top few cm of sediment. We expect that sediment community function, carbon mineralisation and biogeochemical fluxes will be strongly affected by trawling activity because the physical effects of trawling are equivalent to those of an extreme bioturbator, and yet, unlike bioturbating macrofauna, trawling does not directly contribute to community metabolism. We used an existing box-model of a generalised soft sediment system to examine the effects of trawling disturbance on carbon mineralisation and chemical concentrations. We contrasted the effects of a natural scenario, where bioturbation is a function of macrobenthos biomass, with an anthropogenic impact scenario where physical disturbance results from trawling rather than the action of bioturbating macrofauna. Simulation results suggest that the effects of low levels of trawling disturbance will be similar to those of natural bioturbators but that high levels of trawling disturbance prevent the modelled system from reaching equilibrium due to large carbon fluxes between oxic and anoxic carbon compartments. The presence of macrobenthos in the natural disturbance scenario allowed sediment chemical storage and fluxes to reach equilibrium. This is because the macrobenthos are important carbon consumers in the system whose presence reduces the magnitude of available carbon fluxes. In soft sediment systems, where the level physical disturbance due to waves and tides is low, model results suggest that intensive trawling disturbance could cause large fluctuations in benthic chemical fluxes and storage. PMID:16759420

Modelling potential impacts of bottom trawl fisheries on soft sediment biogeochemistry in the North Sea.

PubMed

Duplisea, D E; Jennings, S; Malcolm, S J; Parker, R; Sivyer, D B

2001-12-19

Bottom trawling causes physical disturbance to sediments particularly in shelf areas. The disturbance due to trawling is most significant in deeper areas with softer sediments where levels of natural disturbance due to wave and tidal action are low. In heavily fished areas, trawls may impact the same area of seabed more than four times per year. A single pass of a beam trawl, the heaviest gear routinely used in shelf sea fisheries, can kill 5-65% of the resident fauna and mix the top few cm of sediment. We expect that sediment community function, carbon mineralisation and biogeochemical fluxes will be strongly affected by trawling activity because the physical effects of trawling are equivalent to those of an extreme bioturbator, and yet, unlike bioturbating macrofauna, trawling does not directly contribute to community metabolism. We used an existing box-model of a generalised soft sediment system to examine the effects of trawling disturbance on carbon mineralisation and chemical concentrations. We contrasted the effects of a natural scenario, where bioturbation is a function of macrobenthos biomass, with an anthropogenic impact scenario where physical disturbance results from trawling rather than the action of bioturbating macrofauna. Simulation results suggest that the effects of low levels of trawling disturbance will be similar to those of natural bioturbators but that high levels of trawling disturbance prevent the modelled system from reaching equilibrium due to large carbon fluxes between oxic and anoxic carbon compartments. The presence of macrobenthos in the natural disturbance scenario allowed sediment chemical storage and fluxes to reach equilibrium. This is because the macrobenthos are important carbon consumers in the system whose presence reduces the magnitude of available carbon fluxes. In soft sediment systems, where the level physical disturbance due to waves and tides is low, model results suggest that intensive trawling disturbance could cause large fluctuations in benthic chemical fluxes and storage.

Mobility of 137Cs in freshwater lakes: A mass balance and diffusion study of Lake St. Clair, Southeast Michigan, USA

NASA Astrophysics Data System (ADS)

Wang, Jinlong; Baskaran, Mark; Niedermiller, John

2017-12-01

Cesium-137 is one of the most widely utilized anthropogenic radionuclides, both as a tracer and chronometer in the environment. Its application as an effective chronometer requires a thorough understanding of its geochemical behavior in aqueous systems. In this study, we collected and analyzed a suite of time-series water samples over a period of 8 months (April - November 2015), for particulate and dissolved 137Cs activities from a watershed in southeast Michigan, USA, using Cu2Fe(CN)6-coated cartridges developed to pre-concentrate dissolved 137Cs. We also conducted a series of laboratory experiments with the natural freshwater sediment samples and water with different chemical composition. There were seasonal variations of both particulate and dissolved 137Cs activities in the watersheds of Lake St. Clair. The distribution coefficients of 137Cs determined over a period of 8 months varied between 0.14 × 105 and 6.1 × 105 mL g-1 (mean: 2.9 × 105 mL g-1). The annual input and export flux of total 137Cs activity via rivers into and out of Lake St. Clair were calculated to be 3.6 × 1010 Bq and 1.6 × 1010 Bq, respectively. The amount of 137Cs derived by diffusion from interstitial pore water to the water column was estimated to be 0.30 × 1010 Bq (8.3% of the total input flux) which is similar to the percentage of 137Cs desorption (13%-20%) from sediment placed in oxic soft water system over a period of 30-106 days. For the same concentrations of NH4+, Mn2+, K+, Mg2+, Ca2+, Na+ and Sr2+ in a distilled water, our lab work showed that the sediment-sorbed 137Cs is displaced by ions in the order NH4+ > Mn2+ > K+ > Mg2+ ≈ Ca2+ > Na+ > Sr2+. In laboratory studies, 137Cs sorbed onto sediment was found to be less mobile in oxic soft water (Kd: 2.0 × 103 mL g-1) and more mobile in anoxic soft water (Kd: 0.2 × 103 mL g-1). In a hard water system, however, there is no significant difference in Kd values for both oxic and anoxic conditions. The sequence of Kd values is: oxic soft water > oxic hard water > anoxic hard water > anoxic soft water. The desorption experiments with 137Cs-sorbed sediments also confirmed that 137Cs is much more mobile in soft water than hard water. This mobility of 137Cs under oxic hard water system makes sedimentation rate estimation by 137Cs (based on the time the introduction of 137Cs) problematic in some soft water lakes, and estuarine and coastal waters.

Microfossil evidence for a mid-Jurassic squid egg-laying area in association with the Christian Malford Lagerstätte

NASA Astrophysics Data System (ADS)

Hart, Malcolm; de Jonghe, Alex; Duff, Keith; Page, Kevin; Price, Gregory; Smart, Christopher; Wilby, Philip

2010-05-01

In the 1840s, during the construction of the Great Western Railway west of Swindon, a number of beautifully preserved coleoids (belemnites and squid-like cephalopods) were found. These famous specimens of Belemnoteuthis and Mastigophora, as well as a number of fish, were eventually described as a fossil lagerstätte under the name of the "Christian Malford Squid Bed". Many of these specimens, which come from the Phaeinum Zone (Callovian) of the Oxford Clay Formation, contain soft tissue, muscle fibres and the content of their ink sacs. In October 2007 the British Geological Survey funded an excavation of the site some ~100 m from the original borrow pits alongside the railway. This pit yielded some new coleoid specimens as well as many ammonites, bivalves and gastropods, all of which are exquisitely preserved. Some of the bedding surfaces recovered are plastered with monospecific assemblages of foraminifera (In the 1840s, during the construction of the Great Western Railway west of Swindon, a number of beautifully preserved coleoids (belemnites and squid-like cephalopods) were found. These famous specimens of Belemnoteuthis and Mastigophora, as well as a number of fish, were eventually described as a fossil lagerstätte under the name of the "Christian Malford Squid Bed". Many of these specimens, which come from the Phaeinum Zone (Callovian) of the Oxford Clay Formation, contain soft tissue, muscle fibres and the content of their ink sacs. In October 2007 the British Geological Survey funded an excavation of the site some ~100 m from the original borrow pits alongside the railway. This pit yielded some new coleoid specimens as well as many ammonites, bivalves and gastropods, all of which are exquisitely preserved. Some of the bedding surfaces recovered are plastered with monospecific assemblages of foraminifera (Epistomina spp.). Our work on borehole core No. 10 (from the same location) has recovered exceptionally large numbers of statoliths, otoliths (fish ‘ear' bones), squid hooks and foraminifera. Statoliths are the small, paired, aragonitic stones found in the heads of modern and fossil coleoids. Jurassic statoliths have yet to be described in any detail as there is only one reference to them in the literature (Clarke, 2003). The exceptional abundance of statoliths and squid hooks recorded in the samples from the core is thought to represent a Jurassic squid-breeding ground which existed for a substantial interval of late Callovian time. The annual spawning of female squids massively enlarges their ovaries and this breaks down the body wall leaving spent individuals to die. The lack of belemnites in the same strata suggests that the animals involved (unknown at present) did not possess a calcified "guard". The highest numbers of statoliths occur over a 3 m thickness of strata with the greatest abundance ~1 m below the Christian Malford Squid Bed. The numbers recorded in this part of the Phaeinum Zone are well above background levels in the rest of the Jurassic in the UK (Malcolm Clarke, pers.com.) where one has to wash several kg of sediment to recover <200 statoliths. The occurrence of abundant, though low diversity, foraminiferal assemblages in the same samples point to an oxic, though possibly stressed, environment. The significant proportion of deformed foraminifera in the assemblages appears to confirm that the environment was less than optimum. CLARKE, M.R. 2003. Potential of statoliths for interpreting coleoid evolution: A brief review. Berliner Paläobiol. Abh., 3, 37-47.

The Australian Paleoflood Model for Unconfined Fluvial Deposition on Mars

NASA Technical Reports Server (NTRS)

Bourke, M. C.; Zimbelman, J. R.

2001-01-01

Paleoflood deposits in central Australia represent a new model for possible fluvial deposits on Mars. The distinct Australian assemblage of landforms and sediments is used to identify potential unconfined paleoflood deposits in Mars Orbiter Camera (MOC) images of Mars. Additional information is contained in the original extended abstract.

Invertebrate colonization of leaves and roots within sediments of intermittent coastal plain streams across hydrologic phases

EPA Science Inventory

We compared benthic invertebrate assemblages colonizing three types of buried substrates (leaves, roots and plastic roots) among three intermittent Coastal Plain streams over a one year period. Invertebrate density was significantly lower in root litterbags than in plastic root l...

Soft-sediment deformation structures interpreted as seismites in the uppermost Aptian to lowermost Albian transgressive deposits of the Chihuahua basin (Mexico)

USGS Publications Warehouse

Blanc, E.J.-P.; Blanc-Aletru, M. -C.; Mojon, P.-O.

1997-01-01

Several levels of soft-sediment deformation structures (s.-s.d.s.) cut by synsedimentary normal faults have been observed in the transition beds between the "Las Vigas" and "La Virgen" formations (Cretaceous) in the northeastern part of the Chihuahua basin in Mexico. These structures consisted of four kinds of motifs (floating breccias, flame-like structures, large pillow structures, and wavy structures). They are restricted to five "stratigraphic" levels (??1-??5) and surrounded by undeformed beds in fluvio-lacustrine and tidal deposits and can be traced over a distance of several hundred meters. This deformation is interpreted to have resulted from the combined effects of liquidization and shear stress in soft-sediments due to local earthquakes in the area which could have been generated during the rifting stage of the Chihuahua basin. New constraints placed on the age of the "Las Vigas" Formation (bracketed by Late Aptian charophytes at the bottom and colomiellids of late Aptian to earliest Albian age at the top) suggest that this synrift tectonism lasted at least until the end of the Aptian.

Benthic foraminifera as indicators of pollution in high latitude marine environments

NASA Astrophysics Data System (ADS)

Dijkstra, N.; Junttila, J.; Husum, K.; Carroll, J.; Klitgaard-Kristensen, D.; Hald, M.

2012-04-01

An increasing number of studies demonstrate the potential of benthic foraminifera to characterize ecological status. However, the use of benthic foraminifera as bio-indicators has previously not been tested in high latitudes. This research contributes to the development of foraminifera as a bio-monitoring technique for the Arctic region, as industrial activities in this region will increase in the coming years. Surface sediments (0-1 cm) from sites close to gas fields in the SW Barents Sea were studied. In addition, to elucidate the range from less to very affected, surface sediments from the harbor of the town of Hammerfest (70° N) were studied. At least 300 living benthic foraminifera from the size fraction 100 µm-1 mm were counted and identified at species level. Pollution levels (heavy metals and persistent organic pollutants) and sediment properties (grainsize and TOC) were also analyzed. Pollution levels at the sea floor in the SW Barents Sea are of background to good level (level I-II) according to the definitions by the Water Framework Directorate (WFD). Benthic foraminiferal assemblages are influenced by natural environmental parameters such as water mass properties, water depth, nutrient availability, bottom current strength, and grain size. Surface sediments from the Hammerfest harbor are of moderate environmental status (WFD level II-III) based on heavy metal concentrations and of bad environmental status (WFD IV-V) based on persistent organic pollutant concentrations. Opportunistic benthic foraminifera are dominating the assemblages. The most polluted areas in the harbor are barren for foraminifera or have high amounts of deformed shells. In both environments the foraminiferal diversity of the samples, does not correspond to expected environmental status based on the pollution levels of the sediments. Environmental status classes, based on benthic foraminifera instead of macrofauna, would allow rapid analyses of the environmental impact of pollution.

Paleoecological inferences of recent alluvial damming of a lake basin due to retrogressive permafrost thaw slumping

NASA Astrophysics Data System (ADS)

Quinlan, R.; Delaney, S.; Lamoureux, S. F.; Kokelj, S. V.; Pisaric, M. F.

2014-12-01

Expected climate impacts of future warming in the Arctic include thawing of permafrost landscapes in northern latitudes. Thawing permafrost is expected to have major consequences on hydrological dynamics, which will affect the limnological conditions of Arctic lakes and ponds. In this study we obtained a sediment core from a small lake (informally named "FM1") near Fort McPherson, Northwest Territories, Canada, with a large retrogressive thaw slump (nearly 1 kilometre in diameter) within its catchment. A radiocarbon date from the base of the FM1 sediment core suggests the lake formed between 990-1160 Cal AD. The analysis of aerial photographs indicate the thaw slump initiated between 1970-1990, and sediment geochemistry analysis indicated major changes in sediment content at 54-cm sediment core depth. Analyses of subfossil midge (Chironomidae) fossils inferred that, pre-slump, lake FM1 was shallow with a large bog or wetland environment, with midge assemblages dominated by taxa such as Limnophyes and Parametriocnemus. Post-thaw midge assemblages were dominated by subfamily Chironominae (Tribe Tanytarsini and Tribe Chironomini) taxa, and the appearance of deepwater-associated taxa such as Sergentia suggests that lake FM1 deepened, possibly as a result of alluvial damming from slump materials washing into the lake near its outlet. Most recent stratigraphic intervals infer a reversion back to shallower conditions, with a slight recovery of bog or wetland-associated midge taxa, possibly due to rapid basin infilling from increased deposition rates of catchment-derived materials. Results emphasize that there may be a variety of different outcomes to Arctic lake and pond ecosystems as a result of permafrost thawing, contingent on system-specific characteristics such as slump location relative to the lake basin, and relative inflow and outflow locations within the lake basin.

Environmental Assessment of the Bolinas Lagoon: a study utilizing benthic foraminifera

NASA Astrophysics Data System (ADS)

Benton, L.; Espinoza Madrid, N.; Grande, C.

2016-12-01

Benthic foraminifera have long been recognized for their utility in environmental assessments. They are abundant, diverse, and found in all marine environments, but species distributions depend largely on local environmental conditions. This study analyses benthic foraminiferal assemblages from the Bolinas Lagoon, Marin County, California. The Careers in Science Intern Program collected 36 sediment samples from 13 sites within the Bolinas Lagoon. Foraminiferal assemblages for each site are reported, and species richness, relative abundance, and Shannon's diversity calculated. Results indicate that Shannon's diversity is low throughout the Bolinas Lagoon and stress tolerant taxa are abundant, which suggests that current conditions in the Bolinas Lagoon are sub optimal.

Initial Results on the Extraterrestrial Component of New Sediment Cores Containing Deposits of the Eltanin Impact Event

NASA Technical Reports Server (NTRS)

Kyte, Frank T.; Gersonde, Rainer

2003-01-01

Background The impact of the Eltanin asteroid into the Bellingshausen Sea (2.15 Ma) is the only known impact in a deep-ocean (approx. 5 km) basin. In 1995, Polarstern expedition ANT XII/4 made the first geological survey of the suspected impact region. Three sediment cores sampled around the San Martin seamounts (approx. 57.5 S, 91 W) contained well-preserved impact deposits. Sediments of Eocene age and younger were ripped up and redeposited by the impact. The depositional sequence produced by the impact has three units: a chaotic assemblage of sediment fragments up to 50 cm, followed by laminated sands deposited as a turbulent flow, and finally silts and clays that accumulated from dispersed sediments in the water column. The meteoritic impact ejecta, which is composed of shock-melted asteroidal materials and unmelted meteorites, settled through the water column and concentrated near the top of the laminated sands.

Energy transfer in the Congo deep-sea fan: From terrestrially-derived organic matter to chemosynthetic food webs

NASA Astrophysics Data System (ADS)

Pruski, A. M.; Decker, C.; Stetten, E.; Vétion, G.; Martinez, P.; Charlier, K.; Senyarich, C.; Olu, K.

2017-08-01

Large amounts of recent terrestrial organic matter (OM) from the African continent are delivered to the abyssal plain by turbidity currents and accumulate in the Congo deep-sea fan. In the recent lobe complex, large clusters of vesicomyid bivalves are found all along the active channel in areas of reduced sediment. These soft-sediment communities resemble those fuelled by chemoautotrophy in cold-seep settings. The aim of this study was to elucidate feeding strategies in these macrofaunal assemblages as part of a greater effort to understand the link between the inputs of terrestrially-derived OM and the chemosynthetic habitats. The biochemical composition of the sedimentary OM was first analysed in order to evaluate how nutritious the available particulate OM is for the benthic macrofauna. The terrestrial OM is already degraded when it reaches the final depositional area. However, high biopolymeric carbon contents (proteins, carbohydrates and lipids) are found in the channel of the recent lobe complex. In addition, about one to two thirds of the nitrogen can be assigned to peptide-like material. Even if this soil-derived OM is poorly digestible, turbiditic deposits contain such high amounts of organic carbon that there is enough biopolymeric carbon and proteacinous nitrogen to support dense benthic communities that contrast with the usual depauperate abyssal plains. Stable carbon and nitrogen isotopes and fatty acid biomarkers were then used to shed light on the feeding strategies allowing the energy transfer from the terrestrial OM brought by the turbidity currents to the abyssal food web. In the non-reduced sediment, surface detritivorous holothurians and suspension-feeding poriferans rely on detritic OM, thereby depending directly on the turbiditic deposits. The sulphur-oxidising symbiont bearing vesicomyids closely depend on the reprocessing of OM with methane and sulphide as final products. Their carbon and nitrogen isotopic signatures vary greatly among sites and could reflect the intensity of the anaerobic oxidation of methane (AOM) in the sediments. Within the vesicomyid habitats, the heterotrophic fauna exhibits a distinctively light carbon isotopic signature in comparison to the background sediments, clearly indicating the utilisation of chemosynthetically-derived OM. Fatty acid biomarkers further confirm that dorvilleid polychaetes consume aggregates that perform AOM. Terrestrial OM reprocessing by microbial consortium thus ensures its transfer to the benthic food web in the Congo deep-sea fan.

Response of the diatom flora in the Gdańsk Basin (southern Baltic Sea) to eutrophication in the last century

NASA Astrophysics Data System (ADS)

Witak, Małgorzata

2016-04-01

The diatom flora in six short cores (length of 10-20 cm) taken from Gdańsk Basin, southern Baltic Sea, was analyzed in order to response of diatoms to environmental changes over the past 100 years. This study is a part of CLISED project (Climate Change Impact on Ecosystem Health - Marine Sediments Indicators) funded from Norway Grants in the Polish-Norwegian Research Programme. Three cores P116, M1 and P1 were retrieved from the Gdańsk Deep region, whereas P104, BMPK10 and P110 were drilled from the shallower part - Gulf of Gdańsk. The sediment cores were dated by 210Pb and represented time interval of AD 1895-2015. In this period an artificial mouth of the Vistula River near Świbno was excavated and riverine waters flowed directly to the Gulf of Gdańsk. Urbanization, progressive industrialization and an increase in the inflow of waste water had a strong influence on ecosystem in the last 120 years. The transport of large amounts of nutrients, organic matter and pollutants by the rivers resulted in environmental degradation of the Gdańsk Basin and its progressive eutrophication in particular. Diatoms, being the major component of algal assemblages, are excellent bioindicators for assessing the state of basin ecosystems. They are usually abundant in marine sediments, diverse and sensitive to numerous environmental variables, including physical (e.g. light, temperature, water transparency) and chemical (e.g. pH, alkalinity, nutrient availability) factors. Changes in nutrients concentrations may lead to substantial transformations in the structure of diatom assemblages. Samples for diatom analyses (ca. 0.3-2.0 g dry sediment) were prepared following the standard procedure for diatom observation under light microscope (Battarbee, 1986). To estimate the concentration of siliceous microfossils per unit weight of dry sediment (absolute abundance), a random settling technique was used (Bodén, 1991). Permanent diatom preparations were mounted in Naphrax® (refractive index nD=1.73). The analysis was performed with a NIKON microscope under a 100× oil immersion objective. The raw counts were transformed to relative abundance of the total frustules counted. The diatoms were divided into groups according to their biotype, salinity, trophy and saproby requirements. The content (in percentage) of all ecological groups were counted in the core. A total of 145 diatom species including varieties and forms representing 53 genera were identified in all samples. The diatom community was strong dominance by small-size planktic euhalobous (Thalassiosira levanderi, Pauliella taeniata) and mesohalobous (Cyclotella choctawhatcheeana) species. They were accompanied by freshwater eutraphentic and pollution-tolerant forms Actinocyclus normanii, Cyclostephanos dubius, Cyclotella atomus, C. caspia, C. meneghiniana, Stephanodiscus hantzschii, S. medius, S. neoastraea and S. parvus. The assemblage structure is a visible evidence of the progressive anthropopressure recorded in the near-bottom sediments of the Gdańsk Basin. Moreover, changes in spatial distribution of diatom anthropogenic assemblage show the close relationship to the distance from mouth of the Vistula River.

Calibration of diatom-pH-alkalinity methodology for the interpretation of the sedimentary record in Emerald Lake Integrated watershed study. Final report, 6 May 1985-10 October 1986

DOE Office of Scientific and Technical Information (OSTI.GOV)

Holmes, R.W.

1986-10-10

The present study was designed to establish quantitative relationships between lake air-equilibrated pH, alkalinity, and diatoms occurring in the surface sediments in high-elevation Sierra Nevada Lakes. These relationships provided the necessary information to develop predictive equations relating lake pH to the composition of surface-sediment diatom assemblages in 27 study lakes. Using the Hustedt diatom pH classification system, Index B of Renberg and Hellberg, and multiple linear regression analysis, two equations were developed which predict lake pH from the relative abundance of sediment diatoms occurring in each of four diatom pH groupings.

Planktic foraminiferal assemblages from laminated sediments of the northeastern Arabian Sea: a high-resolution study over the last two millennia

NASA Astrophysics Data System (ADS)

Munz, Philipp; Lückge, Andreas; Siccha, Michael; Kucera, Michal; Schulz, Hartmut

2014-05-01

Modern planktic foraminiferal assemblages in the Arabian Sea are largely controlled by seasonal shifts of surface water properties. Boreal summer (June-September) heating of the Asian landmass and Tibetan Plateau leads to northward migration of the ITCZ and develops an intense atmospheric pressure gradient. Strong monsoonal winds from the southwest lead to coastal- and open ocean upwelling, especially in the western Arabian Sea along the coast of Somalia and Oman. Opposite directed dry and cold winds lead to deep convective mixing during boreal winter (January-March) and breakup of the thermal stratification. Deepening of the mixed-layer thus enables nutrient transport into the photic zone with enhanced primary production. Here we study planktic foraminiferal assemblages from the dominantly winter monsoon controlled Pakistan Margin off Karachi. We sampled annually laminated sediments from box core SO90-39KG and ca. 2-m-long piston core SO130-275KL from the same station. High sedimentation rates and varve-like lamination provides a particular record with very precise age control. Box core 39KG offers a record of the last 100 years with 2-year-resolution and 275KL provides a ca. 10-year-resolution during the last 2100 years. We calculated foraminiferal flux rates after photometric identification and subtraction of light-colored event layers, consisting solely of terrigeneous matter to enable comparison with flux rates from sediment trap stations. We identified a total of 28 planktic foraminiferal (PF) species/morphotypes in the fraction >150μm. During the relatively short period of the past two millennia, several species showed comparatively large fluctuations on decadal time scales, not seen in bioturbated records. Globigerina bulloides, a species generally associated with high primary production rates, fluctuates between ca. 10% and 45%. Highest relative share was observed during periods 1593-1413, 1023-923, 483-393, 63- -7 years AD. Average PF accumulation rates follow a general decreasing trend from ca. 30,000 individuals cm-2 kyr-1 at 100 years BC to 9,000 ind. cm-2 kyr-1 at 1890 years AD, suggesting a decrease in absolute PF production.

Impacts of discarded plastic bags on marine assemblages and ecosystem functioning.

PubMed

Green, Dannielle Senga; Boots, Bas; Blockley, David James; Rocha, Carlos; Thompson, Richard

2015-05-05

The accumulation of plastic debris is a global environmental problem due to its durability, persistence, and abundance. Although effects of plastic debris on individual marine organisms, particularly mammals and birds, have been extensively documented (e.g., entanglement and choking), very little is known about effects on assemblages and consequences for ecosystem functioning. In Europe, around 40% of the plastic items produced are utilized as single-use packaging, which rapidly accumulate in waste management facilities and as litter in the environment. A range of biodegradable plastics have been developed with the aspiration of reducing the persistence of litter; however, their impacts on marine assemblages or ecosystem functioning have never been evaluated. A field experiment was conducted to assess the impact of conventional and biodegradable plastic carrier bags as litter on benthic macro- and meio-faunal assemblages and biogeochemical processes (primary productivity, redox condition, organic matter content, and pore-water nutrients) on an intertidal shore near Dublin, Ireland. After 9 weeks, the presence of either type of bag created anoxic conditions within the sediment along with reduced primary productivity and organic matter and significantly lower abundances of infaunal invertebrates. This indicates that both conventional and biodegradable bags can rapidly alter marine assemblages and the ecosystem services they provide.

Methane Seep Carbonates Host Distinct, Diverse, and Dynamic Microbial Assemblages

PubMed Central

Pasulka, Alexis L.; Marlow, Jeffrey J.; Grupe, Benjamin M.; Levin, Lisa A.

2015-01-01

ABSTRACT Marine methane seeps are globally distributed geologic features in which reduced fluids, including methane, are advected upward from the subsurface. As a result of alkalinity generation during sulfate-coupled methane oxidation, authigenic carbonates form slabs, nodules, and extensive pavements. These carbonates shape the landscape within methane seeps, persist long after methane flux is diminished, and in some cases are incorporated into the geologic record. In this study, microbial assemblages from 134 native and experimental samples across 5,500 km, representing a range of habitat substrates (carbonate nodules and slabs, sediment, bottom water, and wood) and seepage conditions (active and low activity), were analyzed to address two fundamental questions of seep microbial ecology: (i) whether carbonates host distinct microbial assemblages and (ii) how sensitive microbial assemblages are to habitat substrate type and temporal shifts in methane seepage flux. Through massively parallel 16S rRNA gene sequencing and statistical analysis, native carbonates are shown to be reservoirs of distinct and highly diverse seep microbial assemblages. Unique coupled transplantation and colonization experiments on the seafloor demonstrated that carbonate-associated microbial assemblages are resilient to seep quiescence and reactive to seep activation over 13 months. Various rates of response to simulated seep quiescence and activation are observed among similar phylogenies (e.g., Chloroflexi operational taxonomic units) and similar metabolisms (e.g., putative S oxidizers), demonstrating the wide range of microbial sensitivity to changes in seepage flux. These results imply that carbonates do not passively record a time-integrated history of seep microorganisms but rather host distinct, diverse, and dynamic microbial assemblages. PMID:26695630

Deep-sea nematode assemblage has not recovered 26 years after experimental mining of polymetallic nodules (Clarion-Clipperton Fracture Zone, Tropical Eastern Pacific)

NASA Astrophysics Data System (ADS)

Miljutin, Dmitry M.; Miljutina, Maria A.; Arbizu, Pedro Martínez; Galéron, Joëlle

2011-08-01

We investigated nematode assemblages inhabiting the 26-year-old track created by experimental deep-sea mining of polymetallic nodules, and two adjacent, undisturbed sites, one with nodules and one without nodules. The aim was to compare density, assemblage structure, and diversity indices in order to assess the process of recovery of the nematode assemblage inhabiting the disturbed site. This experimental dredging was conducted in 1978 by the Ocean Minerals Company (USA) in the area of a French mining claim in the Clarion-Clipperton Fracture Zone (Tropical Eastern Pacific) at a depth of about 5000 m. The nematode assemblage had not returned its initial state 26 years after the experimental dredging: the total nematode density and biomass within the dredging track were significantly lower than outside the track; the biodiversity indices showed significantly lower nematode diversity within the track; and the structure of the nematode assemblage within the track differed significantly from those in the two undisturbed sites outside the track. However, there were no significant differences in the mean body volumes of adult nematodes and adult-juvenile ratios between the track and reference sites. Parameters such as the rate of sediment restoration (which depends on local hydrological conditions) and the degree and character of the disturbance appeared to be of considerable importance for the recovery rate of the deep-sea nematode assemblages and their ability to recolonize disturbed areas. The rates of recolonization and recovery may vary widely in different deep-sea regions.

Living (Rose-Bengal-Stained) benthic foraminifera along the Kveithola Trough (NW Barents Sea), environmental implications

NASA Astrophysics Data System (ADS)

Sabbatini, Anna; Morigi, Caterina; Lucchi, Renata G.; de Vittor, Cinzia; Bazzano, Matteo

2017-04-01

The distribution and composition of benthic foraminiferal fauna in the Kveithola Trough (NW Barents Sea) were studied in three depositional settings identified on the basis of surface depositional structures, sediment types and present ecosystem characteristics. Sediment samples were collected during the CORIBAR cruise (Hanebuth et al., 2013) aimed at drilling glacigenic sediments in a palaeo-ice stream depositional system in the western Barents Sea. In particular, we report the quantitative data of the living benthic foraminiferal density, biodiversity and vertical distribution in three box-core sediment samples (0-10 cm) collected in two inner trough sites, the drift area and the channel/fault area and one outer shelf site. Rose-Bengal-stained foraminiferal assemblages were investigated from two different size fractions (63-150 and >150 micrometres). In the drift area, the living benthic foraminiferal assemblage is characterized by the presence of oxygen-depleted environmental taxa with low foraminiferal density and biodiversity. This area appears a stagnant environment, strongly affected by low-oxygen, stressed environmental conditions in which foraminifera developed a life strategy aimed to increase the efficiency of food utilization and maximum resistance to ecological stress. As a further support to this interpretation, all the sediments recovered in the drift area are rich in organic matter and in Siboglinid-like tubes together with pockmark evidences on the surface of the box-corer. The sedimentation in the channel/fault area is very similar to that described for the drift area, evidencing stressed environmental conditions. Opportunistic species dominate the benthic foraminiferal fauna. The species distribution of the internal trough sites is consistent with the lithology and with data of quantity and biochemical composition (in terms of phytopigment, protein, lipid, carbohydrate and biopolymeric carbon) of the organic matter. Values of biopolymeric carbon are typical of eutrophic setting and the presence of tolerant low oxygen condition species as Nonionellina labradorica, Nonionella iridea and Fursenkoina fusiformis suggests that the sediment is dysoxic. In the inner part of the trough, the presence of Leptohalysis scottii and the decreasing of N. labradorica could indicate the presence of organic carbon input with higher nutritional quality, probably due to the shallower depth of the station (151 m water depth). The site corresponding to the outer shelf is characterized by the presence of diverse and abundant benthic foraminiferal assemblage suggesting a high oxygenated and mesotrophic environment. The sedimentological evidences characterized by clean sand with large-scale ripple-like features suggest the presence of moderately strong, and persistent bottom currents. We notice in all sites the presence of delicate monothalamous taxa (organic-walled allogromiids, agglutinated saccamminids, psammosphaerids and tubular forms). Therefore, preliminary faunal and sedimentological data allow to describe sediments of the Kveithola Drift, deposited under persistent dense bottom currents, appears today as a stagnant environment strongly affected by low-oxygen concentration, possibly chemosynthetic conditions with likely ongoing gas seep activity from pockmarks.

Deformation of ``Villafranchian'' lacustrine sediments in the Chisone Valley (Western Alps, Italy)

NASA Astrophysics Data System (ADS)

Collo, Giovanni; Giardino, Marco

1997-09-01

The Chisone Valley is located in the internal NW Alps, in the Pinerolese District, an area characterized by present low to medium seismicity. Fine-grained sediments (sand, silt and clay with interbedded gravel) crop out in the lower Chisone Valley: they were first interpreted as glaciolacustrine deposits, and then as a lacustrine infilling of the valley floor probably due to differential uplifting of the valley mouth. Review of this data, together with new field and palynological observations, lead us to refer the lacustrine deposits to approximately the Lower Pleistocene (Villafranchian). In many outcrops, the lacustrine deposits show strong soft-sediment deformation such as convolute laminations, water-escape structures and disrupted beds, some of them associated with folds and faults (cm to dm in size); only two sites show metric to decametric folds and faults trending E-W and N-S. Detailed structural analysis conducted along a recently exposed section (Rio Gran Dubbione site) shows several soft-sediment deformation features on the limbs of mesoscale folds. Because of their intimate structural association, the origin of these minor structures seems to be connected to synsedimentary activity on reverse and normal faults (m to dm in size) affecting the lacustrine deposits in the same locality. Soft-sediment deformation features can be interpreted as possible paleoseismites. If so, the present seismicity of the Pinerolese District, which is the major area of such activity in NW Italy, cannot be considered an isolated episode in the geological evolution of the region; even if there is no supporting evidence for continuous seismicity, the deformations in the lacustrine sediments of the Chisone Valley testify to Early Pleistocene seismic activity, probably related to the recent tectonic evolution of the internal side of the NW Alps.

What killed Frame Lake? A precautionary tale for urban planners.

PubMed

Gavel, Melody J; Patterson, R Timothy; Nasser, Nawaf A; Galloway, Jennifer M; Hanna, Bruce W; Cott, Peter A; Roe, Helen M; Falck, Hendrik

2018-01-01

Frame Lake, located within the city of Yellowknife, Northwest Territories, Canada, has been identified as requiring significant remediation due to its steadily declining water quality and inability to support fish by the 1970s. Former gold mining operations and urbanization around the lake have been suspected as probable causes for the decline in water quality. While these land-use activities are well documented, little information is available regarding their impact on the lake itself. For this reason, Arcellinida, a group of shelled protozoans known to be reliable bioindicators of land-use change, were used to develop a hydroecological history of the lake. The purpose of this study was to use Arcellinida to: (1) document the contamination history of the lake, particularly related to arsenic (As) associated with aerial deposition from mine roaster stacks; (2) track the progress of water quality deterioration in Frame Lake related to mining, urbanization and other activities; and (3) identify any evidence of natural remediation within the lake. Arcellinida assemblages were assessed at 1-cm intervals through the upper 30 cm of a freeze core obtained from Frame Lake. The assemblages were statistically compared to geochemical and loss-on-ignition results from the core to document the contamination and degradation of conditions in the lake. The chronology of limnological changes recorded in the lake sediments were derived from 210 Pb, 14 C dating and known stratigraphic events. The progress of urbanization near the lake was tracked using aerial photography. Using Spearman correlations, the five most significant environmental variables impacting Arcellinida distribution were identified as minerogenics, organics, As, iron and mercury ( p  < 0.05; n  = 30). Based on CONISS and ANOSIM analysis, three Arcellinida assemblages are identified. These include the Baseline Limnological Conditions Assemblage (BLCA), ranging from 17-30 cm and deposited in the early Holocene >7,000 years before present; the As Contamination Assemblage (ACA), ranging from 7-16 cm, deposited after ∼1962 when sedimentation began in the lake again following a long hiatus that spanned to the early Holocene; and the Eutrophication Assemblage (EA), ranging from 1-6 cm, comprised of sediments deposited after 1990 following the cessation of As and other metal contaminations. The EA developed in response to nutrient-rich waters entering the lake derived from the urbanization of the lake catchment and a reduction in lake circulation associated with the development at the lake outlet of a major road, later replaced by a causeway with rarely open sluiceways. The eutrophic condition currently charactering the lake-as evidenced by a population explosion of eutrophication indicator taxa Cucurbitella tricuspis -likely led to a massive increase in macrophyte growth and winter fish-kills. This ecological shift ultimately led to a system dominated by Hirudinea (leeches) and cessation of the lake as a recreational area.

The Importance of Fine-Scale Flow Processes and Food Availability in the Maintenance of Soft-Sediment Communities

DTIC Science & Technology

1993-02-01

of the bottom sediments at a given site. From long time -series measurements of the flow and sediment-transport environment on Georges Bank...significantly affect flows and sediment transport depends, in part, on timing . Biological effects on seafloor stability may be more pronounced, for example...potentially can enhance particle retention time within the tube bed via skimming flow (described earlier), although it is unclear if natural populations of

Ecological response of benthic foraminifera to the acid drainage from mine areas. An example from the Gromolo torrent mouth (Eastern Ligurian Sea, Italy)

NASA Astrophysics Data System (ADS)

Bergamin, Luisa; Capello, Marco; Carbone, Cristina; Magno, Maria Celia; Consani, Sirio; Cutroneo, Laura; Ferraro, Luciana; Pierfranceschi, Giancarlo; Romano, Elena

2016-04-01

Benthic foraminiferal assemblages react in short time to natural and anthropogenic environmental changes and, for this, they are considered as reliable indicators of environmental quality. An interesting application of these indicators is the study of their response to environmental changes in coastal marine areas, affected by dismissed mines and dump areas. The Libiola Fe-Cu sulphide mine was intensively exploited in 19th and 20th centuries, and the activity ended in 1962. The sulphide mineral assemblages consist of pyrite and chalcopyrite, with minor sphalerite and pyrrhotite, in a gangue of quartz and chlorite. The sulphide ore occurs within the Jurassic ophiolites of the Northern Apennines which were subjected to metamorphic and tectonic processes during the subsequent Apennine orogenesis. Waters circulating in the Libiola mine area, and discharging in the adjacent streams and creeks, are strongly polluted due to the diffuse occurrence of Acid Mine Drainage processes. The Gromolo torrent collects these acidic waters enriched of heavy metals which flow into Ligurian Sea. The study area is characterised by a shelf with a gentle slope, mainly constituted by sediment supplied by Entella torrent. The general circulation has trend from East to West and the coastal drift is generally eastwards. A total of 15 marine sediment samples (upper 2 cm) were collected by means of Van Veen grab in the coastal zone close to the Gromolo mouth and analyzed for living (rose Bengal stained) and dead benthic foraminifera, together with grain size, metals and trace elements, and metal fractioning. Quantitative foraminiferal parameters, like as abundance, species diversity, heterogeneity and assemblage composition, were determined and evaluated for environmental purpose. Additionally, possible increase above the natural background level of deformed specimens was considered as indicative of metal contamination. The grain-size analyses highlighted mainly sandy sediments, characterized by a small pelitic fraction, ranging from 0.5% to 28%. Sediments are greyish, usually very fine-grained, with infrequent organogenic fraction. The mineralogical composition is based on dark green grains of serpentine nature, sometimes fibrous, with spread inclusions of magnetite, associated with lithic sandstone, dark gray shales, gabbros, fragments of quartz, feldspar, serpentine and chlorite. Metal concentration shows, in the whole study area, high concentrations of As, Cr, and Ni while, in the samples close to the Gromolo mouth, high values also for Cu, Co, Zn, Pb, Hg, and Cd were recorded. The foraminiferal study highlighted several samples with very low abundance, especially in the coastal belt between Gromolo and Entella torrents. Slightly higher abundance was recorded close to the Gromolo mouth, where sediments are strongly characterized by Ammonia. Both living and dead assemblages displayed low diversity and high dominance with Ammonia beccarii which accounts up to 66% of total abundance. Moreover, percentage of deformed specimens generally exceeded the natural background reaching 5%. All these aspects are clear evidence of an environmental stress.

A multi-proxy record from the Quaternary Vienna Basin: Chronology, climate and environmental change at the Alpine-Carpathian transition during the last 250,000 years

NASA Astrophysics Data System (ADS)

Salcher, Bernhard; Lomax, Johanna; Frank, Christa; Preusser, Frank; Scholger, Robert; Ottner, Franz; Wagreich, Michael

2016-04-01

Dated multi-proxy records of terrestrial sequences in the Quaternary of the circum-Alpine realm are sparse. This is especially true for those exceeding the time span of the last glacial maximum as extensive glaciers eroded substantial parts of potential records. Outside formerly glaciated regions, preservation space is low in the absence of tectonic subsidence. Foreland terraces forming as a consequence of mountain range uplift may partly account for this gap but are typically dominated by coarse-grained fluvial sediments commonly reflecting only short pulses during cold stage periods. Here we analyze a terrestrial record in the Vienna Basin in order to derive regional climatic and environmental changes of the last c. 250 ka. The Vienna Basin forms as a classical pull-apart feature showing a length of almost 200 km and a width of c. 55 km. Quaternary subsidence is focused along the active Vienna Basin Transfer Fault leading to the formation of a series of narrow strike-slip (sub-) basins and grabens with the Mitterndorf sub-basin being the largest (c. 270 km²) and deepest (c.175 m). The southern part of the basin is confined by the alpine mountain front and fed by two alluvial fans highlighting up to several tens of meters thick coarse grained, massive sediments intercalated by up to few meters thick fine clastic sediments. We investigated the fan's sequence development through core and outcrop sampling applying luminescence dating, magnetostratigraphy, soil and lithofacies classification as well as malacological analysis. The latter comprise the determination and distribution of species and individuals as well as coenological analysis. Data suggest a distinct sequence development with coarse-grained massive sediments abundantly deposited during cold periods (MIS 2 and 6) and fine, overbank sediments and soils, dominantly forming during warmer, Interstadial or Interglacial periods (MIS 5 and 7). Overbanks and soils are generally rich in terrestrial mollusk assemblages giving us the opportunity to reconstruct changes to the paleoenvironment, well compensating for the typically lack of pollen in such environments. For example high species diversity in land-snail assemblages associated with a large quantity of xeric individuals in overbank fines point to narrow riparian habitats along distinct streams. They are limited by dry grasslands were soil forming processes dominate. This is in accordance with the lithofacies data suggesting changes to the river style and transport mode but is also in accordance with the Holocene record. Compared to modern data, land-snails assemblages suggest that the mean annual precipitation was generally lower during most of the covered time period. Similar is true for the estimated mean annual temperature: Only during the late MIS7, malacological data suggests temperatures which may have been slightly higher than today. To our knowledge, the provided chronologies of the land-snail successions do also reflect the first absolute age constraints from assemblages clearly older than the LGM.

Short-term impact of deep sand extraction and ecosystem-based landscaping on macrozoobenthos and sediment characteristics.

PubMed

de Jong, Maarten F; Baptist, Martin J; Lindeboom, Han J; Hoekstra, Piet

2015-08-15

We studied short-term changes in macrozoobenthos in a 20m deep borrow pit. A boxcorer was used to sample macrobenthic infauna and a bottom sledge was used to sample macrobenthic epifauna. Sediment characteristics were determined from the boxcore samples, bed shear stress and near-bed salinity were estimated with a hydrodynamic model. Two years after the cessation of sand extraction, macrozoobenthic biomass increased fivefold in the deepest areas. Species composition changed significantly and white furrow shell (Abra alba) became abundant. Several sediment characteristics also changed significantly in the deepest parts. Macrozoobenthic species composition and biomass significantly correlated with time after cessation of sand extraction, sediment and hydrographical characteristics. Ecosystem-based landscaped sand bars were found to be effective in influencing sediment characteristics and macrozoobenthic assemblage. Significant changes in epifauna occurred in deepest parts in 2012 which coincided with the highest sedimentation rate. We recommend continuing monitoring to investigate medium and long-term impacts. Copyright © 2015 Elsevier Ltd. All rights reserved.

Evidence for Isostatic Emergence and Holocene Environmental Change Recorded in Chironomid Assemblages and Sediment Composition of Coastal Lake T1 in SW Greenland

NASA Astrophysics Data System (ADS)

Berman, K.; Axford, Y.; Lasher, G. E.

2017-12-01

Multi-proxy analysis of a coastal lake in southwest Greenland near Nuuk provides evidence for regional environmental changes, including the timing of isostatic rebound and the temperature history of the area. T1 (informal name) is a small lake 50 km south of Nuuk, at 17.5 m elevation and currently isolated from glacial meltwater drainage. The lake's sediment record begins approximately 9500 cal years BP, when the site was submerged beneath sea level due to glacial isostatic depression following the Last Glacial Maximum. The record captures the transition of the environment from a submerged, glacially-influenced marine site to a non-glacially fed (and initially meromictic) freshwater lake 8600 cal years BP. Magnetic susceptibility, a proxy for sediment minerogenic content, decreased rapidly from 9500 to 8600 years BP, before abruptly stabilizing and remaining relatively low and steady for the rest of the record. The transition to a lacustrine environment was characterized by a rapid and relatively simultaneous increase in primary productivity (inferred from biogenic silica concentrations) and shift towards terrestrial versus marine sources of organic matter (inferred from carbon:nitrogen ratios and nitrogen isotopes) between 8700 and 8400 years BP. Together, these proxies and the presence of marine shells below the transition provide robust evidence for the transition from a marine environment to a freshwater lake in response to regional postglacial isostatic rebound. Within the Holocene, measures of bulk sediment composition (e.g., biogenic silica, loss-on-ignition and magnetic susceptibility) are relatively stable. Chironomid (Insecta: Diptera: Chironomidae) assemblages, which in some environments are quantitative proxies for summer temperature changes, show species-level shifts within the Holocene that will be interpreted in this presentation alongside indicators of landscape change including carbon:nitrogen ratios, bulk sediment spectral reflectance and bulk sediment elemental composition from scanning XRF.

Bioturbation transports secondary microplastics to deeper layers in soft marine sediments of the northern Baltic Sea.

PubMed

Näkki, Pinja; Setälä, Outi; Lehtiniemi, Maiju

2017-06-15

Microplastics (MPs) are observed to be present on the seafloor ranging from coastal areas to deep seas. Because bioturbation alters the distribution of natural particles on inhabited soft bottoms, a mesocosm experiment with common benthic invertebrates was conducted to study their effect on the distribution of secondary MPs (different-sized pieces of fishing line<1mm). During the study period of three weeks, the benthic community increased MP concentration in the depth of 1.7-5.1cm in the sediment. The experiment revealed a clear vertical gradient in MP distribution with their abundance being highest in the uppermost parts of the sediment and decreasing with depth. The Baltic clam Macoma balthica was the only study animal that ingested MPs. This study highlights the need to further examine the vertical distribution of MPs in natural sediments to reliably assess their abundance on the seafloor as well as their potential impacts on benthic communities. Copyright © 2017 Elsevier Ltd. All rights reserved.

Soft Soil Improvement for Sub-grade Layer Using Hexagonal Micropiles Layout

NASA Astrophysics Data System (ADS)

Ambak, K.; Abdullah, N. A. H.; Yusoff, M. F.; Abidin, M. H. Z.

2018-04-01

Soft soil problems are often associated with sediment and stability where it represents a major challenge in Geotechnical Engineering. Research on a soft soil was carried out to determine the level of sediment resulting from the applied load and thus compare the most ideal form of arrangement by the results obtained from bearing capacity. The study was conducted at Research Centre for Soft Soil (RECESS), UTHM by using kaolin. There are several tests conducted on kaolin before the arrangement of pile which is liquid limit test. Through these tests, the level of water content can be maintained which is 1.2 liquid limit where it is in the homogeneous condition. Density test also carried to know weight of kaolin and water that needed in the model. Meanwhile, large strain consolidation test carried on the soil by placing a load of 8 kPa. Then, the pile was arranged in the soil in the shape of a hexagon and square. Load was increased to 12 kPa and imposed on the surface of the pile with a different forms. After 24 hours, the reading of sediment was measured everyday and the process collecting data conducted for 3 week. Based on data obtained, time against sediment can be plotted. To determine the bearing capacity, direct shear test was conducted to get the value coefficient of cohesion, c as a parameter in the calculation of the soil bearing capacity. The results showed that the rate of settlement occurs is different where hexagonal form less the rate of settlement compared to square form which is 64.2% while the results of bearing capacity have the same value.

Live/Dead Comparisons of Ostracodes in Temperate Lakes Reveal Evidence of Human Impact and Provides a Tool to Measure the Progress of Remediation Efforts

NASA Astrophysics Data System (ADS)

Spergel, J.; Kimball, K. C.; Fitzpatrick, S. A.; Michelson, A. V.; Leonard-Pingel, J.

2015-12-01

Lake ecosystems face a multitude of environmental threats including: eutrophication, overfishing, and heavy metal pollution. Tools to identify lakes impacted by human activity and quantify that impact are needed to combat their environmental degradation. One such promising tool has been the comparison between living communities and associated time-averaged death assemblages of mollusks in marine environments. Here we extend the reach of such live/dead comparisons using ostracodes in temperate lakes. We sampled six lakes in Wisconsin for living communities and associated death assemblages of ostracodes: two lakes impacted by human activity, two relatively "pristine" lakes, and two remediated lakes. We took sixteen grab samples of the upper centimeter of sediment in each lake, capturing simultaneously living benthic ostracodes and discarded valves of dead ostracodes. We found that impacted lakes had lower live/dead fidelity in taxonomic composition and rank-order abundance distributions and greater within-lake variation in death assemblages than "pristine" lakes. Additionally, the living communities in the impacted lakes tended to be lower in species richness and have lower evenness than "pristine" lakes. Remediated lakes displayed similar live/dead fidelity in taxonomic composition and rank-abundance distributions to "pristine" lakes and had lower within-lake variation in death assemblages than impacted lakes. Remediated lakes also contained living communities that tended to be richer and more even than impacted lakes. The lower live/dead fidelity of ostracodes in impacted lakes indicate live/dead ostracode comparisons can provide a tool to identify lake ecosystems impacted by humans. The similar results of remediated and "pristine" lakes indicate remediation efforts in these lakes have been successful in alleviating environmental impact detrimental to ostracode communities. This result indicates live/dead comparisons of ostracodes can be a useful tool to monitor the progress of remediation efforts already underway. Further work will focus on dating the upper centimeter of sediment in these lakes to provide an estimate of how long it takes for death assemblages to accumulate and thus how long it will take to regain high live/dead fidelity in impacted lakes undergoing remediation.

High spatiotemporal variability in meiofaunal assemblages in Blanes Canyon (NW Mediterranean) subject to anthropogenic and natural disturbances

NASA Astrophysics Data System (ADS)

Román, Sara; Vanreusel, Ann; Romano, Chiara; Ingels, Jeroen; Puig, Pere; Company, Joan B.; Martin, Daniel

2016-11-01

We investigated the natural and anthropogenic drivers controlling the spatiotemporal distribution of the meiofauna in the submarine Blanes Canyon, and its adjacent western slope (NW Mediterranean margin of the Iberian Peninsula). We analyzed the relationships between the main sedimentary environmental variables (i.e. grain size, Chl-a, Chl-a: phaeopigments, CPE, organic carbon and total nitrogen) and the density and structure of the meiofaunal assemblages along a bathymetric gradient (from 500 to 2000 m depth) in spring and autumn of 2012 and 2013. Twenty-one and 16 major taxa were identified for respectively the canyon and slope, where the assemblages were always dominated by nematodes. The gradual decreasing meiofaunal densities with increasing depth at the slope showed little variability among stations and corresponded with a uniform pattern of food availability. The canyon was environmentally much more variable and sediments contained greater amounts of food resources (Chl-a and CPE) throughout, leading not only to increased meiofaunal densities compared to the slope, but also different assemblages in terms of composition and structure. This variability in the canyon is only partly explained by seasonal food inputs. The high densities found at 900 m and 1200 m depth coincided with significant increases in food availability compared to shallower and deeper stations in the canyon. Our results suggest that the disruption in expected bathymetric decrease in densities at 900-1200 m water depth coincided with noticeable changes in the environmental variables typical for disturbance and deposition events (e.g., higher sand content and CPE), evoking the hypothesis of an anthropogenic effect at these depths in the canyon. The increased downward particle fluxes at 900-1200 m depth caused by bottom trawling along canyon flanks, as reported in previous studies, support our hypothesis and allude to a substantial anthropogenic factor influencing benthic assemblages at these depths. The possible relationships of the observed patterns and some major natural environmental (e.g., surface productivity or dense shelf water cascading) and anthropogenic (e.g. the lateral advection and downward transport of food-enriched sediments resuspended by the daily canyon-flank trawling activities) drivers are discussed.

Fish assemblages in Tanzanian mangrove creek systems influenced by solar salt farm constructions

NASA Astrophysics Data System (ADS)

Mwandya, Augustine W.; Gullström, Martin; Öhman, Marcus C.; Andersson, Mathias H.; Mgaya, Yunus D.

2009-04-01

Deforestation of mangrove forests is common occurrence worldwide. We examined fish assemblage composition in three mangrove creek systems in Tanzania (East Africa), including two creeks where the upper parts were partly clear-cut of mangrove forest due to the construction of solar salt farms, and one creek with undisturbed mangrove forest. Fish were caught monthly for one year using a seine net (each haul covering 170 m 2) within three locations in each creek, i.e. at the upper, intermediate and lower reaches. Density, biomass and species number of fish were lower in the upper deforested sites compared to the mangrove-fringed sites at the intermediate and lower parts in the two creeks affected by deforestation, whereas there were no differences among the three sites in the undisturbed mangrove creek system. In addition, multivariate analyses showed that the structure of fish assemblages varied between forested and clear-cut sites within the two disturbed creeks, but not within the undisturbed creek. Across the season, we found no significant differences except for a tendency of a minor increase in fish densities during the rainy season. At least 75% of the fishes were juveniles and of commercial interest for coastal fisheries and/or aquaculture. Mugil cephalus, Gerres oyena and Chanos chanos were the most abundant species in the forested sites. The dominant species in the clear-cut areas were M. cephalus and Elops machnata, which were both found in relatively low abundances compared to the undisturbed areas. The conversion of mangrove forests into solar salt farms not only altered fish assemblage composition, but also water and sediment conditions. In comparison with undisturbed areas, the clear-cut sites showed higher salinity, water temperature as well as organic matter and chlorophyll a in the sediments. Our results suggest that mangrove habitat loss and changes in environmental conditions caused by salt farm developments will decrease fish densities, biomass and species numbers as well as alter the overall fish assemblage composition in the salt farm area but not downstream in the creek.

Sediment sources and their contribution along northern coast of the South China Sea: Evidence from clay minerals of surface sediments

NASA Astrophysics Data System (ADS)

Liu, Jianguo; Yan, Wen; Chen, Zhong; Lu, Jun

2012-09-01

Clay minerals of surface sediment samples from nine bays/harbors along northern coast of the South China Sea (SCS) are used for sediment sources and contribution estimation in the study areas. Results reveal that sediments in the study bays/harbors seem to be a mixture of sediments from the Pearl, Hanjiang River and local islands/rivers, but their clay mineral assemblage is distinct from that of Luzon and Taiwan sediments, indicating that sediments are derived mainly from the neighboring sources through riverine input and partly from localized sediments. Due to input of local sediments in the northern SCS, sediments from both east of the Leizhou Peninsula (Area IV) and next to the Pearl River estuary (PRE, Area II) have high smectite percent. Affected by riverine input of the Pearl and Hanjiang Rivers, sediments in west of the PRE (Area III) and east of the PRE (Area I) have high illite (average 47%) and kaolinite (54%) percents, respectively. Sediment contributions of various major sources to the study areas are estimated as the following: (1) the Hanjiang River provide 95% and 84% sediments in Areas I and II, respectively, (2) the Pearl River supply 79% and 29% sediments in Areas III and IV, respectively and (3) local sediments contribute the rest and reach the maximum (˜71%) in Area IV.

Spatial Distribution of the Emerging Contaminant Triclosan in Sediments and Water of an Urbanized Estuary: Greenwich Bay, Rhode Island, USA

EPA Science Inventory

The use of personal care products (PCPs) has resulted in the release and accumulation of a diverse assemblage of emerging chemicals in the environment. Many PCPs incorporate triclosan (TCS), an antimicrobial compound, within their formulations and as a result, TCS is frequently ...

Spatial Distribution of the Emerging Contaminant Triclosan in the Sediments of an Urbanized Estuary: Greenwich Bay, Rhode Island, USA

EPA Science Inventory

Increase in the use of personal care products (PCPs) has resulted in the release and accumulation of a diverse assemblage of emerging chemicals in the environment. One such chemical, triclosan (TCS), an antimicrobial compound, has been incorporated into many PCPs for approximate...

Early invasion population structure of quagga mussel and associated benthic invertebrate community composition on soft sediment in a large reservoir

USGS Publications Warehouse

Wittmann, Marion E.; Chandra, Sudeep; Caires, Andrea; Denton, Marianne; Rosen, Michael R.; Wong, Wai Hing; Teitjen, Todd; Turner, Kent; Roefer, Peggy; Holdren, G. Chris

2010-01-01

In 2007 an invasive dreissenid mussel species, Dreissena bugensis (quagga mussel), was discovered in Lake Mead reservoir (AZ–NV). Within 2 years, adult populations have spread throughout the lake and are not only colonizing hard substrates, but also establishing in soft sediments at depths ranging from 1 to >100 m. Dreissena bugensis size class and population density distribution differs between basins; cluster analysis revealed 5 adult cohorts within Boulder Basin and Overton Arm but low densities and low cohort survival in the Las Vegas Basin. Regression analysis suggests depth and temperature are not primary controllers of D. bugensis density in Lake Mead, indicating other factors such as sediment type, food availability or other resource competition may be important. Monthly veliger tows showed at least 2 major spawning events per year, with continuous presence of veligers in the water column. Adult mussels have been found in spawn or post-spawn condition in soft sediments in shallow to deep waters (>80 m) indicating the potential for reproduction at multiple depths. Comparisons to a 1986 benthic survey suggest there have been shifts in nondreissenid macroinvertebrate composition; however, it is unclear if this is due to D. bugensis presence. Current distribution of nondreissenid macroinvertebrates is heterogeneous in all 3 basins, and their biodiversity decreased when D. bugensis density was 2500/m2 or greater.

Macrobenthic molluscs from a marine - lagoonal environmental transition in Lesvos Island (Greece).

PubMed

Evagelopoulos, Athanasios; Koutsoubas, Drosos; Gerovasileiou, Vasilis; Katsiaras, Nikolaos

2016-01-01

This paper describes an occurence dataset, also including numerical abundance and biomass data, pertaining to the macrobenthic molluscan assemblages from a marine - lagoonal environmental transition. The study system was the soft-substrate benthoscape of the area of the Kalloni solar saltworks (Lesvos Island, Greece). Specifically, the study area extended from the infralittoral zone of the inner Kalloni Gulf (marine habitat) to the bottoms of the first two evaporation ponds of the Kalloni solar saltworks (lagoonal habitat). Bottom sediment samples (3 replicates) were collected with a Van Veen grab sampler (0.1 m 2 ) at four sampling sites, along a 1.5 km long line transect that spanned the marine - lagoonal environmental transition. A total of four surveys were carried out seasonally in 2004.  A total of 39,345 molluscan individuals were sorted out of the sediment samples and were identified to 71 species, belonging to the Gastropoda (36), Bivalvia (34) and Scaphopoda (1) classes. Numerical abundance and wet biomass (with shells) data are included in the dataset. The dataset described in the present paper partially fills a significant gap in the scientific literature: Because ecological research of coastal lagoons has seldom explicitly considered the marine - lagoonal habitats interface, there are no openly accessible datasets pertaining to the particular structural component of the transitional waters benthoscapes of the Mediterranean Sea. Such datasets could prove valuable in the research of the structure and functioning of transitional waters benthoscapes. The present dataset is available as a supplementary file (Suppl. material 1) and can also be accessed at http://ipt.medobis.eu/resource?r=kalloni_saltworks_phd.

Fish debris in sediments of the upwelling zone off central Peru: a late Quaternary record

NASA Astrophysics Data System (ADS)

De Vries, Thomas J.; Pearcy, William G.

1982-01-01

Scales of the anchoveta were abundantly represented among fish remains preserved in partly laminated marine sediments on the upper continental slope of Peru. Hake scales were less common. Sardine scales occurred only sporadically. Recent accumulation rates of scales indicate that prior to exploitation the anchoveta standing stock off Peru was about five times that of northern anchovy off California. During glacial time, however, clupeoids were less abundant off Peru and were more evenly distributed among sardines and anchoveta. Evidence from fish scales and phytoplankton assemblages suggests that the coastal waters off Peru did not respond to continental glacial and neoglacial advances simply by cooling. High accumulation rates of scales from warm-water fishes and tests of cool-water phytoplankton preceded and succeeded an interval containing low numbers of dominantly warm-water taxa. This interval coincided with the second neoglacial advance (2000 to 2700 y B.P.). Similar but less well-defined warm-water and cool-water assemblages coincided with the third neoglacial advance (200 to 400 y B.P.) and the last glacial retreat. Upwelling intensity probably fluctuated more widely during early and late phases of glacial and neoglacial cooling episodes, accounting for the mix of distinctly warm-water and cool-water assemblages and perhaps for an enhanced productivity. A weakened Intertropical Convergence Zone or strengthened coastal countercurrent may explain the warm-water marine faunas and floras and wet climates on the mainland of Peru inferred by others for neoglacial or glacial time.

Seasonal variation in the flux of euthecosomatous pteropods collected in a deep sediment trap in the Sargasso Sea

NASA Astrophysics Data System (ADS)

Almogi-Labin, A.; Hemleben, Ch.; Deuser, W. G.

1988-03-01

A 4-year series of sediment trap samples from a depth of 3.2 km in the Sargasso Sea (32°05'N, 64°15'W) has revealed seasonal variations in the flux of euthecosomatous pteropods. Total pteropod flux is related to seasonal variations of the total particulate and organic carbon flux with a lag of 1-1.5 months. High flux of pteropods (>200 specimens m -2 day -1) occurs in late winter to mid-summer. Shells of individual pteropod species arrive in deep water in a seasonal succession similar to that in the living assemblage. Peak fluxes of Styliola subula, Clio pyramidata and Limacina bulimoides were recorded from February to May. Limacina inflata, Limacina lesueuri and Cuvierina columnella entered the trap in maximum numbers from April to mid-August. Creseis virgula conica and C. acicula were most abundant from June to late August. The latter two are non-migrating, epipelagic pteropods and comprise <10% of the assemblage. Diel migrators dominate the pteropod assemblage (92%). During the summer months they appear to migrate at greater depth, without reaching the surface water. Although many young are produced, only a small fraction, about 4% in the case of L. inflata and L. bulimoides, survives and reaches maturity. Adult shell size of L. inflata and L. bulimoides varies seasonally, reaching maximum size during spring, probably in response to increasing food availability.

Assessing the impact of the Asian mussel Arcuatula senhousia in the recently invaded Oristano Lagoon-Gulf system (W Sardinia, Italy)

NASA Astrophysics Data System (ADS)

Como, S.; Floris, A.; Pais, A.; Rumolo, P.; Saba, S.; Sprovieri, M.; Magni, P.

2018-02-01

In the marine environment, the introduction and spread of non-indigenous mussels may cause major modifications to native assemblages and alter the trophic flow within the food web. We analysed the impacts of the recently sighted Asian date mussel Arcuatula (=Musculista) senhousia on sediment features, native macrozoobenthic assemblages and the δ13C and δ15N values of dominant macrozoobenthic taxa in the Oristano Lagoon-Gulf system (western Sardinia, Italy). Results showed that the amount of variation generated by the occurrence of Arcuatula senhousia was lower than the intrinsic spatial variability in sediment features, macrozoobenthic assemblages and the δ13C values of dominant deposit feeders (Hediste diversicolor, Cirriphormia tentaculata, Haminoea navicula and Cyclope neritea) of this system. In addition, δ13C and δ15N values of A. senhousia were found to be similar to those of co-occurring suspension feeders Cerastoderma glaucum, Ruditapes decussatus and Scrobicularia plana, indicating exploitation of common food resources. The overall lack of effects of A. senhousia may be dependent on the moderate densities encountered in our study area (<1000 individuals m-2). We suggest that the low rate of new arrivals, owing to limited shellfish farming and maritime activities in the area, and unfavourable environmental conditions of the lagoons especially in summer (e.g. anoxia) which erode mussel populations, likely prevent A. senhousia from entering its expansion phase and impacting local benthic communities.

Signs of Soft-Sediment Deformation at 'Slickrock'

NASA Technical Reports Server (NTRS)

2004-01-01

Geological examination of bedding textures indicates three stratigraphic units in an area called 'Slickrock' located in the martian rock outcrop that NASA's Opportunity examined for several weeks. This is an image Opportunity took from a distance of 2.1 meters (6.9 feet) during the rover's 45th sol on Mars (March 10, 2004) and shows a scour surface or ripple trough lamination. These features are consistent with sedimentation on a moist surface where wind-driven processes may also have occurred.

[figure removed for brevity, see original site] Figure 1

In Figure 1, interpretive blue lines indicate boundaries between the units. The upper blue line may coincide with a scour surface. The lower and upper units have features suggestive of ripples or early soft-sediment deformation. The central unit is dominated by fine, parallel stratification, which could have been produced by wind-blown ripples.

[figure removed for brevity, see original site] Figure 2

In Figure 2, features labeled with red letters are shown in an enlargement of portions of the image. 'A' is a scour surface characterized by truncation of the underlying fine layers, or laminae. 'B' is a possible soft-sediment buckling characterized by a 'teepee' shaped structure. 'C' shows a possible ripple beneath the arrow and a possible ripple cross-lamination to the left of the arrow, along the surface the arrow tip touches. 'D' is a scour surface or ripple trough lamination. These features are consistent with sedimentation on a moist surface where wind-driven processes may also have occurred.

A late Holocene pollen record from proglacial Oblong Tarn, Mount Kenya.

PubMed

Courtney Mustaphi, Colin J; Gajewski, Konrad; Marchant, Rob; Rosqvist, Gunhild

2017-01-01

High-elevation ecosystems, such as those on Mount Kenya are undergoing significant changes, with accelerated glacial ice losses over the twentieth century creating new space for alpine plants to establish. These ecosystems respond rapidly to climatic variability and within decades of glacial retreat, Afroalpine pioneering taxa stabilize barren land and facilitate soil development, promoting complex patches of alpine vegetation. Periglacial lake sediment records can be used to examine centennial and millennial scale variations in alpine and montane vegetation compositions. Here we present a 5300-year composite pollen record from an alpine tarn (4370 m asl) in the Hausberg Valley of Mount Kenya. Overall, the record shows little apparent variation in the pollen assemblage through time with abundant montane forest taxa derived and transported from mid elevations, notably high abundances of aerophilous Podocarpus pollen. Afroalpine taxa included Alchemilla, Helichrysum and Dendrosenecio-type, reflecting local vegetation cover. Pollen from the ericaceous zone was present throughout the record and Poaceae percentages were high, similar to other high elevation pollen records from eastern Africa. The Oblong Tarn record pollen assemblage composition and abundances of Podocarpus and Poaceae since the late Holocene (~4000 cal yr BP-present) are similar to pollen records from mid-to-high elevation sites of nearby high mountains such as Mount Elgon and Kilimanjaro. These results suggest a significant amount of uphill pollen transport with only minor apparent variation in local taxa. Slight decreasing trends in alpine and ericaceous taxonomic groups show a long-term response to global late Holocene cooling and a step decrease in rate of change estimated from the pollen assemblages at 3100 cal yr BP in response to regional hydroclimatic variability. Changes in the principal component axis scores of the pollen assemblage were coherent with an independent mid-elevation temperature reconstruction, which supported the strong influence of uphill pollen transport from montane forest vegetation and association between temperatures and montane vegetation dynamics. Pollen accumulation rates showed some variability related to minerogenic sediment input to the lake. The Oblong Tarn pollen record provides an indication of long term vegetation change atop Mount Kenya showing some decreases in local alpine and ericaceous taxa from 5300-3100 cal yr BP and minor centennial-scale variability of montane taxa from mid elevation forests. The record highlights potentials, challenges and opportunities for the use of proglacial lacustrine sediment to examine vegetation change on prominent mountain massifs.

Recent benthic foraminifera and sedimentary facies from mangrove swamps and channels of Abu Dhabi (United Arab Emirates)

NASA Astrophysics Data System (ADS)

Fiorini, Flavia; Odeh, Weaam A. S. Al; Lokier, Stephen W.; Paul, Andreas

2016-04-01

Zonation of Recent mangrove environments can be defined using benthic foraminifera, however, little is known about foraminifera from mangrove environments of the Arabian Gulf. The objective of this study is to produce a detailed micropaleontological and sedimentological analysis to identify foraminiferal associations in several coastline environments (mangrove swamps and channels) located on the eastern side of Abu Dhabi Island (UAE). Detailed sediment sampling collection in mangal environments of Eastern Abu Dhabi was carried out to assess the distribution of living and dead benthic foraminifera in different sedimentary facies in the mangal and in the surrounding area comprising natural environments of the upper and lower intertidal area (mud flats and channels) and areas modified by anthropogenic activities (dredged channels). The fine-grain sediments collected near mangrove (Avicenna marina) roots presented a high abundance of living and dead foraminifera tests. The assemblages in these samples show very low diversity and are almost entirely constituted of small-sized opportunistic species belonging to the genera Ammonia and Elphidium. In particular: • Samples collected on the mud flat and in ponds at the margin of the channel show a foraminiferal assemblage characterised by abundant foraminifera belonging to the genera Ammonia, Elphidium, Triloculina, Quinqueloculina, Peneroplis and Spirolina. • Samples collected in the lower (wet) intertidal area close to Avicenna marina roots, presented a low-diversity assemblage mostly comprising opportunistic foraminifera of the genera Ammonia and Elphidium along with rare miliolidae. • Samples from the upper intertidal area (dry) close to Avicenna marina roots, produced an assemblage exclusively composed of small-sized opportunistic Ammonia and Elphidium, together with abundant specimens belonging to the genera Trochammina. Throchammina specimens have not been previously recorded from Recent sedimentary samples of the coastline environments of the Arabian Gulf. The samples collected in the higher energy settings (channels) were characterised by a very low abundance of foraminiferal tests, no or rare living forms were found in the coarser grained facies. Most of the samples collected in the dredged channels were barren. The distribution of Recent benthic foraminifera from mangrove environment of the Abu Dhabi region present a powerful tool for constructing zonation of marine coastline environments and can be employed as a modern analogue for interpreting the depositional environment of ancient coastline sediments.

Latest Paleocene lithologic and biotic events in neritic deposits of southwestern New Jersey

USGS Publications Warehouse

Gibson, Thomas G.; Bybell, Laurel M.; Owens, James P.

1993-01-01

In the southwestern New Jersey Coastal Plain, four drill holes contain continuous neritic sedimentation across the Paleocene/Eocene boundary (calcareous nannofossil Zone NP 9/NP 10 boundary). Significant lithologic and biotic changes occur in these strata near the top of the Paleocene. Global warming, increased precipitation, and other oceanographic and climatic events that have been recognized in high-latitude, deep-oceanic deposits of the latest Paleocene also influenced mid-latitude, shallow-marine, and terrestrial environments of the western North Atlantic. The diverse, well-preserved calcareous nannofossil flora that is present throughout the entire New Jersey boundary section accurately places these events within the uppermost part of the upper Paleocene Zone NP 9. Several rapid but gradational changes occur within a 1.1-m interval near the top of Zone NP 9. The changes include (1) a change in lithology from glauconitic quartz sand to clay, (2) a change in clay mineral suites from illite/smectite-dominated to kaolinite-dominated, (3) a change in benthic foraminiferal assemblages to a lower diversity fauna suggestive of low-oxygen environments, (4) a significant increase in planktonic foraminiferal abundance, and (5) an increased species turnover rate in marine calcareous nannofossils. Pollen was sparse in the New Jersey drill holes, but terrestrial sporomorph species in Virginia exhibit increased turnover rates at a correlative level. Foraminiferal assemblages and lithology indicate that relative sea level rose in New Jersey at the same time as these late Paleocene events occurred in late Biochron NP 9. The higher sea levels influenced sediment type and absolute abundance of planktonic foraminifers in the deposits. Above the initial increase of kaolinite in the upper part of Zone NP 9, the kaolinite percentage continues to increase, and the maximum kaolinite value occurs in the uppermost part of Zone NP 9. There are few changes in either the sediments or the biota precisely at the Zone NP 9/NP 10 boundary in New Jersey. The clay-rich deposits with a high kaolinite clay mineral suite, the lowered diversity benthic foraminiferal assemblages, the abundant planktonic foraminiferal specimens, and the calcareous nannofossil assemblages continued essentially unchanged into the earliest Eocene Zone NP 10. Within the lower part of Zone NP 10, the kaolinite percentage decreased to very low values.

Tracking the History and Ecological Changes of Rising Double-Crested Cormorant Populations Using Pond Sediments from Islands in Eastern Lake Ontario.

PubMed

Stewart, Emily M; Michelutti, Neal; Shenstone-Harris, Sarah; Grooms, Christopher; Weseloh, Chip; Kimpe, Linda E; Blais, Jules M; Smol, John P

2015-01-01

In the Laurentian Great Lakes region, the double-crested cormorant (Phalacrocorax auritus) has seen a thousand-fold population increase in recent decades. These large colonies of birds now often conflict with socioeconomic interests, particularly due to perceived competition with fisheries and the destruction of terrestrial vegetation in nesting habitats. Here we use dated sediment cores from ponds on islands in eastern Lake Ontario that receive waste inputs from dense colonies of cormorants and ring-billed gulls (Larus delawarensis) to chronicle the population rise of these species and assess their long-term ecological impacts. Modern water chemistry sampling from these sites reveals drastically elevated nutrient and major ion concentrations compared to reference ponds not influenced by waterbirds. Geochemical tracers in dated sediment cores, particularly δ15N and chlorophyll-a concentrations, track waterbird influences over time. Fossil diatom assemblages were dominated by species tolerant of hyper-eutrophic and polluted systems, which is in marked contrast to assemblages in reference sites. In addition to establishing long-term ecological impacts, this multi-proxy paleoecological approach can be used to determine whether islands of concern have been long-term nesting sites or were only recently colonized by cormorant or ring-billed gull populations across the Great Lakes, facilitating informed management decisions about controversial culling programs.

Benthic foraminiferal assemblages as bio-indicators of metals contamination in sediments, Qarun Lake as a case study, Egypt

NASA Astrophysics Data System (ADS)

Abd El Naby, Ahmed; Al Menoufy, Safia; Gad, Ahmed

2018-03-01

Qarun Lake, in the Fayoum Depression of the Western Desert of Egypt, lies within the deepest area in the River Nile flood plain. The drainage water in the Qarun Lake is derived from the discharge of the natural and artificial drainage systems in the Fayoum. Mixed domestic and agricultural pollutants, including heavy metals, nitrates, phosphates, sulfates and pesticides, are discharged into Qarun Lake. Forty-six samples, collected from the undisturbed layer of sediments were used for benthic foraminiferal analysis. Concentrations of some selected trace metal elements (Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, Sr, V, and Zn) were also determined. Statistical analysis of the abiotic variables (Texture distribution of sediments, Physico-chemical parameters, and metals concentrations) and of the biotic variables (distribution of benthic foraminiferal species) were also performed. The Q-mode cluster analysis of benthic foraminiferal distribution has provided evidence that the Qarun Lake can be subdivided into two cluster groups (A and B), reflecting environmental changes in the lake ecosystem. Cluster B can also be subdivided into two sub-clusters (B1 and B2). The presence of only pollution tolerant taxa with higher faunal density and lower diversity and the absence of the other foraminiferal assemblages in cluster A were attributed to the high concentration of trace metal elements and the strong environmental stress at the eastern and central parts of the Qarun Lake.

Climate change and glacier retreat drive shifts in an Antarctic benthic ecosystem.

PubMed

Sahade, Ricardo; Lagger, Cristian; Torre, Luciana; Momo, Fernando; Monien, Patrick; Schloss, Irene; Barnes, David K A; Servetto, Natalia; Tarantelli, Soledad; Tatián, Marcos; Zamboni, Nadia; Abele, Doris

2015-11-01

The Antarctic Peninsula (AP) is one of the three places on Earth that registered the most intense warming in the last 50 years, almost five times the global mean. This warming has strongly affected the cryosphere, causing the largest ice-shelf collapses ever observed and the retreat of 87% of glaciers. Ecosystem responses, although increasingly predicted, have been mainly reported for pelagic systems. However, and despite most Antarctic species being benthic, responses in the Antarctic benthos have been detected in only a few species, and major effects at assemblage level are unknown. This is probably due to the scarcity of baselines against which to assess change. We performed repeat surveys of coastal benthos in 1994, 1998, and 2010, analyzing community structure and environmental variables at King George Island, Antarctica. We report a marked shift in an Antarctic benthic community that can be linked to ongoing climate change. However, rather than temperature as the primary factor, we highlight the resulting increased sediment runoff, triggered by glacier retreat, as the potential causal factor. The sudden shift from a "filter feeders-ascidian domination" to a "mixed assemblage" suggests that thresholds (for example, of tolerable sedimentation) and alternative equilibrium states, depending on the reversibility of the changes, could be possible traits of this ecosystem. Sedimentation processes will be increasing under the current scenario of glacier retreat, and attention needs to be paid to its effects along the AP.

Modern pollen deposition in Long Island Sound

USGS Publications Warehouse

Beuning, Kristina R.M.; Fransen, Lindsey; Nakityo, Berna; Mecray, Ellen L.; Buchholtz ten Brink, Marilyn R.

2000-01-01

Palynological analyses of 20 surface sediment samples collected from Long Island Sound show a pollen assemblage dominated by Carya, Betula, Pinus, Quercus, Tsuga, and Ambrosia, as is consistent with the regional vegetation. No trends in relative abundance of these pollen types occur either from west to east or associated with modern riverine inputs throughout the basin. Despite the large-scale, long-term removal of fine-grained sediment from winnowed portions of the eastern Sound, the composition of the pollen and spore component of the sedimentary matrix conforms to a basin-wide homogeneous signal. These results strongly support the use of select regional palynological boundaries as chronostratigraphic tools to provide a framework for interpretation of the late glacial and Holocene history of the Long Island Sound basin sediments.

Environmental factors controlling macrofaunal assemblages on six microtidal beaches of the Ligurian Sea (NW Mediterranean)

NASA Astrophysics Data System (ADS)

Covazzi Harriague, Anabella; Albertelli, Giancarlo

2007-06-01

Six microtidal beaches along the Ligurian coast (NW Mediterranean, Italy) were sampled in order to study their macrofaunal assemblages. All six beaches are subject to heavy tourism in the swimming season and three were subject to nourishment activities during the study period (May 2000). The beaches of Lavagna, Varazze and Pietra Ligure were sampled three times: before the nourishment and the onset of the swimming season (March 2000), after the nourishment (June 2000) and at the end of the swimming season (October 2000). The beaches of Varigotti, Albisola and Loano were sampled twice: before and after the swimming season (March and October 2000, respectively). Sampling was performed along two transects (T1 and T2), about 500 m apart, each transect having three sampling stations: one placed in the swash zone, one in the surf zone and one in the subtidal zone (depth of 3-5 m), in order to verify how far the nourishment material reached. The beaches were characterised by coarse sediments that became finer towards the sub-littoral station. The Beach Deposit Index and Beach Index classified the beaches as reflective (Lavagna, Varazze, Albisola and Varigotti) or intermediate (Pietra Ligure and Loano). Species richness showed a clearly increasing pattern from the swash zone (average 7) to the subtidal zone (average 103). The beach communities were dominated by polychaetes, in particular Saccocirrus papillocercus, which was mainly responsible for the dissimilarity between the beach and subtidal stations. The highest abundance was observed at the surf station (average 118.6 ind. m -2) and the lowest at the subtidal station (average 82.1 ind. m -2). The sediment composition and macrofaunal assemblages were not affected by the beach nourishment. The beach communities responded to different environmental descriptors: species richness seemed to be governed by environmental harshness, while abundance seemed to be linked to the degree of homogeneity of the sediments and the quality of the food supply.

Abrupt changes of intermediate-water oxygen in the northwestern Pacific during the last 27 kyr

NASA Astrophysics Data System (ADS)

Ishizaki, Yui; Ohkushi, Ken'ichi; Ito, Takashi; Kawahata, Hodaka

2009-04-01

An oxygen minimum zone (OMZ) currently exists at intermediate water depths on the northern Japanese margin in the northwestern Pacific. The OMZ results largely from a combination of high surface-water productivity and poor ventilation of intermediate waters. We investigated the late Quaternary history (last 27 kyr) of the intensity of this OMZ using changes in benthic foraminiferal carbon isotopes and assemblages in a sediment core taken on the continental slope off Shimokita Peninsula, northern Japan, at a water depth of 975 m. The core was located well within the region of the present-day OMZ and high surface-water productivity. The benthic foraminiferal δ13C values, which indicate millennial-scale fluctuations of nutrient contents at the sediment-water interface, were 0.48‰ lower during the last glacial maximum (LGM) than during the late Holocene. These results do not indicate the formation of glacial intermediate waters of subarctic Pacific origin, but rather the large contribution of high-nutrient water masses such as the Antarctic Intermediate Water, implying that the regional circulation pattern during the LGM was similar to that of modern times. Benthic foraminiferal assemblages underwent major changes in response to changes in dissolved oxygen concentrations in ocean floor sediments. The lowest oxygen and highest nutrient conditions, marked by dysoxic taxa and negative values of benthic foraminiferal δ13C, occurred during the Bølling/Allerød (B/A) and Pre-Boreal warming events. Dysoxic conditions in this region during these intervals were possibly caused by high surface-water productivity at times of reduced intermediate-water ventilation in the northwestern Pacific. The benthic assemblages show dysoxic events on approx. 100- to 200-year cycles during the B/A, reflecting centennial-scale productivity changes related to freshwater cycles and surface-water circulation in the North Pacific.

A Holocene molluscan succession from floodplain sediments of the upper Lena River (Lake Baikal region), Siberia

NASA Astrophysics Data System (ADS)

White, Dustin; Preece, Richard C.; Shchetnikov, Alexander A.; Parfitt, Simon A.; Dlussky, Konstantin G.

2008-05-01

Floodplain sediments of the upper Lena River near Basovo in south-central Siberia have yielded the most detailed Holocene molluscan succession yet reported from the entire eastern Palaearctic. Over 72,500 shells from at least 28 species of terrestrial and 23 species of freshwater mollusc have been recovered, an abundance and diversity far higher than previously reported from the region. The molluscan assemblages are dominated by land snails, especially members of the genus Vallonia, represented by five species including Vallonia tenuilabris and two poorly known species Vallonia kamtschatica and Vallonia cf. chinensis. Other noteworthy species recovered include Gastrocopta theeli, Carychium pessimum, Vertigo extima (southernmost record), Vertigo microsphaera and the first Asian records of three other taxa ( Vertigo geyeri, Vertigo genesii and Vertigo parcedentata). Illustrations are provided for the critical species, since opinions differ about the status of various taxa and the correct names that should be used. The molluscan assemblages show clear successional trends during the early to mid-Holocene, reflecting episodes of dryness/wetness on the floodplain. Drier conditions at ca 6350 14C yr BP coincide with major changes in the archaeological record seen at other sites in the region but it remains unclear whether the two are linked. A prominent charcoal-rich horizon dated to ca 2800 14C yr BP marks a burning event in the catchment, which resulted in a two-fold increase in sediment accumulation rate. Remains of small mammals occurred throughout the sequence including a tooth of Microtus cf. maximowiczii, possibly the first occurrence of Ungar vole west of Lake Baikal. The faunal analyses have been integrated with a detailed pedological study of the sedimentary profile and a chronology was obtained by means of 12 AMS radiocarbon dates. This study provides the first detailed palaeoecological information relating to Holocene molluscan assemblages from the Cis-Baikal region and lays the foundation for future work in the eastern Palaearctic.

Downstream impacts of dams: shifts in benthic invertivorous fish assemblages

USGS Publications Warehouse

Granzotti, Rafaela Vendrametto; Miranda, Leandro E.; Agostinho, Angelo A.; Gomes, Luiz Carlos

2018-01-01

Impoundments alter connectivity, sediment transport and water discharge in rivers and floodplains, affecting recruitment, habitat and resource availability for fish including benthic invertivorous fish, which represent an important link between primary producers and higher trophic levels in tropical aquatic ecosystems. We investigated long-term changes to water regime, water quality, and invertivorous fish assemblages pre and post impoundment in three rivers downstream of Porto Primavera Reservoir in south Brazil: Paraná, Baía and Ivinhema rivers. Impacts were distinct in the Paraná River, which is fully obstructed by the dam, less evident in the Baía River which is partially obstructed by the dam, but absent in the unimpounded Ivinhema River. Changes in water regime were reflected mainly as changes in water-level fluctuation with little effect on timing. Water transparency increased in the Paraná River post impoundment but did not change in the Baía and Ivinhema rivers. Changes in fish assemblages included a decrease in benthic invertivorous fish in the Paraná River and a shift in invertivorous fish assemblage structure in the Baía and Paraná rivers but not in the unimpounded Ivinhema River. Changes in water regime and water transparency, caused by impoundment, directly or indirectly impacted invertivorous fish assemblages. Alterations of fish assemblages following environmental changes have consequences over the entire ecosystem, including a potential decrease in the diversity of mechanisms for energy flow. We suggest that keeping existing unimpounded tributaries free of dams, engineering artificial floods, and intensive management of fish habitat within the floodplain may preserve native fish assemblages and help maintain functionality and ecosystem services in highly impounded rivers.

Vertical oxygen minimum zone oscillations since 20 ka in Santa Barbara Basin: A benthic foraminiferal community perspective

NASA Astrophysics Data System (ADS)

Moffitt, Sarah E.; Hill, Tessa M.; Ohkushi, Kenichi; Kennett, James P.; Behl, Richard J.

2014-01-01

we present a history of deoxygenation of upper intermediate waters during the last deglaciation from Santa Barbara Basin (SBB), based on quantitative analyses of benthic foraminiferal assemblages, from a new shallow piston core above basin sill depth (MV0811-15JC, 418 m), and previously described sequences in the deeper basin (MD02-2504, 481 m and MD02-2503, 570 m). We document a 152 m depth transect of benthic foraminiferal assemblages to extract changing community structure (density, diversity, and evenness) and improve paleoenvironmental interpretation of late Quaternary vertical oscillations in the upper boundary of the oxygen minimum zone (OMZ). Close interaction between changes in open margin OMZ and that of the restricted SBB is documented using these quantitative techniques. MV0811-15JC, while being unlaminated, contains strongly hypoxic foraminiferal assemblages (including species Bolivina tumida and Nonionella stella), coeval with preserved sediment laminations in the deeper cores. Last Glacial Maximum (LGM) assemblages across this transect contained oxic fauna and high diversity. At 14.7 ka, glacial termination IA, hypoxic benthic fauna appeared across the transect, recording hypoxic waters (<0.5 ml L-1) < 300 m from the ocean surface. Bølling/Allerød (B/A) assemblages uniquely stand out in the record, exhibited by low density, diversity, and evenness, and taxonomic composition reflecting extreme and stressful hypoxia and methane-rich environments. Younger Dryas assemblages were diverse and composed of oxic fauna, similar to LGM assemblages. Termination IB initiated another deoxygenation shift, followed by OMZ-associated faunal and density patterns. This analysis strengthens the quantitative assessment of oxygen concentrations involved in deglacial OMZ change and reveals the unexpected, remarkable shallowness of OMZ influence during the B/A.

Multifractal Analysis of Seismically Induced Soft-Sediment Deformation Structures Imaged by X-Ray Computed Tomography

NASA Astrophysics Data System (ADS)

Nakashima, Yoshito; Komatsubara, Junko

Unconsolidated soft sediments deform and mix complexly by seismically induced fluidization. Such geological soft-sediment deformation structures (SSDSs) recorded in boring cores were imaged by X-ray computed tomography (CT), which enables visualization of the inhomogeneous spatial distribution of iron-bearing mineral grains as strong X-ray absorbers in the deformed strata. Multifractal analysis was applied to the two-dimensional (2D) CT images with various degrees of deformation and mixing. The results show that the distribution of the iron-bearing mineral grains is multifractal for less deformed/mixed strata and almost monofractal for fully mixed (i.e. almost homogenized) strata. Computer simulations of deformation of real and synthetic digital images were performed using the egg-beater flow model. The simulations successfully reproduced the transformation from the multifractal spectra into almost monofractal spectra (i.e. almost convergence on a single point) with an increase in deformation/mixing intensity. The present study demonstrates that multifractal analysis coupled with X-ray CT and the mixing flow model is useful to quantify the complexity of seismically induced SSDSs, standing as a novel method for the evaluation of cores for seismic risk assessment.

Soft-sediment deformation structures interpreted as seismites in the uppermost Aptian to lowermost Albian transgressive deposits of the Chihuahua basin (Mexico)

USGS Publications Warehouse

Blanc, E.J.-P.; Blanc-Aletru, M. -C.; Mojon, P.-O.

1998-01-01

Several levels of soft-sediment deformation structures (s.-s.d.s.) cut by synsedimentary normal faults have been observed in the transition beds between the "Las Vigas" and "La Virgen" formations (Cretaceous) in the northeastern part of the Chihuahua basin in Mexico. These structures consisted of four kinds of motifs (floating breccias, flame-like structures, large pillow structures, and wavy structures). They are restricted to five "stratigraphie" levels (Z1-Z5) and surrounded by undeformed beds in fluvio-lacustrine and tidal deposits and can be traced over a distance of several hundred meters. This deformation is interpreted to have resulted from the combined effects of liquidization and shear stress in soft-sediments due to local earthquakes in the area which could have been generated during the rifting stage of the Chihuahua basin. New constraints placed on the age of the "Las Vigas" Formation (bracketed by Late Aptian charophytes at the bottom and colomiellids of late Aptian to earliest Albian age at the top) suggest that this synrift tectonism lasted at least until the end of the Aptian. ?? Springer-Verlag 1998.

Benthic foraminifera as tools in interpretation of subsurface hydrocarbon fluid flow at Veslemøy High and Hola-Vesterålen areas of the Barents Sea.

NASA Astrophysics Data System (ADS)

Baranwal, Soma; Sauer, Simone; Knies, Jochen; Chand, Shyam; Jensen, Henning; Klug, Martin

2014-05-01

Relatively few studies have focused on high-latitude benthic foraminifera related to hydrocarbon seeps. In this study, we present micropaleontological data from 8 gravity cores from the Veslemøy High and 4 surface sediments (0-1cm) from Hola-Vesterålen, Norway. The study of hydrocarbon impregnation and its effect on benthic foraminfera was conducted on selected sediment samples from the calcium-rich Holocene sediments of the Veslemøy High. The assemblage of foraminifera have been identified from three regional clusters. Cluster I and II are dominated by benthic foraminifera Buccella, Cassidulina, Cibicides, Discopulvinulina, Epistominella, Pullenia and Trifarina. Cluster III is distinct with an elevated abundance of Cassidulina, Cibicides and Trifarina with significant (>5 %) occurrence of Nonionella and Uvigerina. There is no apparent dissolution on the preserved foraminifera. However, there can be differential dissolution or destruction of the more fragile (thinner-walled test) species like Epistominella, Nonionella or Pullenia while leaving behind over-represented species like Cibicides or Trifarina (both preferring coarse grained, high energy areas that can withstand permanent winnowing and redeposition) with higher preservation potential. Also, Cluster III is placed right over the underlying fault line with shallow seep-indications and thus the fluids released may have induced the dissolution of the fragile species. Moreover, the significant occurrence of benthic foraminifera Nonionella auris, and Uvigerina peregrina, in Holocene deposits of Cluster III may be indicative of environments influenced by hydrocarbon migration to the seafloor. Previous studies have reported active natural hydrocarbon seepage in the Hola area and the stable carbon and hydrogen isotopic composition of methane in the sediments suggests a predominantly thermogenic methane source. The seep-assemblage is composed of Cibicides (~60%), Cassidulina, Discanomalina, Textularia and Trifarina. Discanomalina coronata is an indicator species to identify active cold-water coral mounds. A negative carbon isotopic signal is recorded by D. coronata in all samples. Seep samples with low diversities also contain deformed individuals of Cibicides lobatulus (3.4-6.5 %), similar to those reported for a gigantic oil spill from a tanker or for environments polluted with heavy metals. However, it is an attached form and thus its test shape is affected by the nature of the substratum. Carbon isotopic signature of the deformed specimens reveal slightly lower values than their undeformed counterparts. One sample from Ullsfjorden was also studied where the assemblage is represented by Bulimina, Cassidulina, Globobulimina, Melonis, Nonionella and Reophax. Infaunal fauna B. marginata, M. barleeanum, and N. labradorica prefer muddy/silty to sandy substrata and high organic matter input, and thrive under suboxic-dysoxic conditions. All species in this assemblage have recorded negative carbon isotopic signal.

Sediment transport mechanisms inferred from heavy mineral assemblages on the 2010 Chilean tsunami deposit

NASA Astrophysics Data System (ADS)

Cascalho, João; Costa, Pedro; Lario, Javier

2017-04-01

Characterization of heavy mineral (HM) assemblages in tsunami deposits has been applied to infer inundation and backwash phases and to establish sediment sources. In ideal conditions and due to their specific density (>2.9 g/cm3), heavy minerals are the most suitable component of a sediment assemblage that can provide information regarding flow competence. Having these features in consideration, sandy tsunamigenic samples from Arauco and Mataquito areas (central Chile) were retrieved after the 27th of February 2010 tsunami that affected the Chilean coastline. Twenty seven samples (a total of 54 thin sections) tsunamigenic and beach samples were prepared to observe HM under the petrographic microscope. After dividing the samples in 4 fractions (<63 µm, 63- 125 µm, 125-500µm and >500 µm), HM were separated using bromoform and two fractions (63- 125 µm and 125-500µm) were individually mounted using Canada balsam resin on glass slides. About 300 heavy minerals per slide were identified and counted. Both assemblages were mainly composed of magnetite, pyrrhotite, amphiboles, pyroxenes, olivine, micas and zircon (this specie particularly abundant in the finer fraction analyzed). In Arauco (Ar), average HM percentages in the 125-500 µm fraction was 17.9% while in Mataquito (Ma) it was 25.7%. In the 63-125 µm fraction HM average percentages were 36.9% and 56.1%, for Ar and Ma respectively. In the 125-500 µm fraction the percentage of magnetic minerals (the densest of the denser HM) correspond to 13.2% in Ar and 2.7% in Ma. While in the finer fraction these percentages are of 0.24% and 0.1% In Ar it was possible to perceive that the highest concentration in HM and magnetic minerals was observed in the NE sector (Llico) of the embayment, where the highest run-up was observed. In this specific sector an inland decrease of HM and magnetic minerals was detected along a 300m profile, with HM percentages varying from 27% to 9% and magnetic minerals from 16% to 5%, thus suggesting a progressive energy decrease with inundation extent. In Ma only an inland decrease in magnetic minerals was observed (in Lloca sector) with values decreasing from 4.9% to 2.5% with 175m. This also indicates a decrease in sediment transport competence by the incoming tsunami waves. Here, the potential of HM is confirmed as a useful sedimentological tool to better understand tsunami events retrieving relevant information regarding to infer energy of tsunami waves. This work was supported by the Spanish Government Project CGL2013-42847-R. and through FCT- Instituto Dom Luiz UID/GEO/50019/2013. This is a contribution to the UNESCO IGCP Project 639 "Sea Level Change from Minutes to Millennia".

Soft-sediment deformations (convolute lamination and load structures) in turbidites as indicators of flow reflections against bounding slopes

NASA Astrophysics Data System (ADS)

Tinterri, Roberto; Muzzi Magalhaes, Pierre; Tagliaferri, Alessio; Cunha, Rogerio S.; Laporta, Michele

2015-04-01

Soft-sediment deformations, such as convolute laminations, load structures and water escapes are very rapid deformations that occur in unconsolidated sediments near the depositional surface during or shortly after deposition and before significant diagenesis. These types of deformations develop when primary stratifications are deformed by a system of driving forces, while the sediment is temporarily in a weakened state due to the action of a deformation mechanism know as liquidization. This deformation occurs if the applied stress exceeds the sediment strength, either through an increase in the applied stress or through a temporary reduction in sediment strength. Liquidization mechanisms can be triggered by several agents, such as seismic shaking, rapid sedimentation with high-fallout rates or cyclic-pressure variations associated with storm waves or breaking waves. Consequently, soft-sediment deformations can be produced by different processes and form ubiquitous sedimentary structures characterizing many sedimentary environments. However, even though these types of structures are relatively well-known in terms of geometry and sedimentary characteristics, many doubts arise when the understanding of deformation and trigger mechanisms is attempted. As stressed also by the recent literature, the main problem lies in the fact that the existing approaches for the identification of triggering agents rely on criteria that are not diagnostic or not applicable to outcrop-based studies, because they are not always based on detailed facies analysis related to a paleoenvironmental-context approach. For this reason, this work discusses the significance of particular types of soft-sediment deformations that are very common in turbidite deposits, namely convolute laminations and load structures, especially on the basis of a deep knowledge of the stratigraphic framework and geological setting in which these structures are inserted. More precisely, detailed facies analyses of the turbidites containing these deformative structures show that they are genetically linked to contained-reflected beds in structurally-confined basins, suggesting a trigger mechanism associated with the cyclic-wave loading produced by flow impacts or reflected bores and internal waves related to ponded turbidity currents. The data that can demonstrate this hypothesis come from the foredeep turbidites of the Marnoso-arenacea Formation (northern Italy) and Annot Sandstones (southwestern France), where a basin scale high-resolution stratigraphic framework with bed-by-bed correlations is now available. These data show that the lateral and vertical distribution of convolute laminae and load structures is not random but has an evident depositional logic related to reflection processes against bounding slopes. Therefore, the main objectives of this work are: 1) to show that convolute laminae and load structures are strictly associated with other sedimentary structures that are unequivocally related to reflection and rebound processes of turbidity currents against morphological obstacles; 2) to show that their lateral and vertical distribution increases concomitantly with the number of contained-reflected beds in the proximity of structurally-controlled morphological highs; 3) to show that the increase in contained-reflected beds with convolute laminae is strictly related to the increase in the synsedimentary-structural uplifts producing more pronounced morphologic highs; 4) to discuss the processes that link soft-sediment deformations with cyclic-wave loading related to internal waves and bores produced by reflection processes.

Marine historical ecology at the Brijuni Islands, Croatia: preliminary results from down-core changes of foraminiferal assemblages

NASA Astrophysics Data System (ADS)

Vidovic, Jelena; Cosovic, Vlasta; Gallmetzer, Ivo; Haselmair, Alexandra; Zuschin, Martin

2015-04-01

The Late Holocene in the northern Adriatic is characterized by the eustatic peak of the sea-level rise, followed by the equilibrium between the regional tectonic subsidence and hydro-isostatic emergence and relatively stable sea level for a few thousand years. During this period the area experienced changes in sedimentation rate, food/oxygen availability in the benthic ecosystem and eutrophication with seasonal hypoxic and anoxic events. In order to reconstruct the marine paleoecology in the Brijuni Islands area during this period, a multidisciplinary study was carried out, including geochemical (TOC, trace metals, carbonate content), micropaleontological analyses (benthic foraminifera) and dating of sediments and mollusc shells. The principal aim of this study is to observe the effects of ecological shifts on foraminiferal assemblages during the Late Holocene. One core of 1.5 m length was taken at a sampling station south of Veli Brijuni Island, located within a marine protected area with no fishing/dredging pressure (Croatian national park). The core was sliced into smaller subsamples, and four sediment fractions of each subsample (63, 125, 250 and 500 µm) were analyzed for standard properties of the foraminiferal community (species richness, faunal composition, biodiversity indices), in comparison with relevant physical and geochemical properties of the sediment. The results concerning changes in foraminiferal species composition and abundance point to differences within the core: surface sediments are dominated by suspension feeders (Planorbulina mediterranensis, Lobatula lobatula, Cibicides variabilis, Cibicides refulgens), whereas deposit feeders (genera Textularia, Siphonaperta, Adelosina, Trioculina) appear in higher abundances at approximately 30 cm of the sediment depth and dominate down-core. Species richness in the first 30 cm is lower (10 to 34 species per sample) in comparison to the middle part of the core (39 to 53 species), and decreases again at 100 cm to 25 to 42 species per sample. Diversity indices follow the pattern of species richness and point to normal marine conditions. Similarity indices rise with core depth. The radiometric dating of the sediments together with carbon-calibrated amino acid- racemisation of mollusc shells from selected species will help to determine the timing of major ecological changes.

Late Miocene fossils from shallow marine sediments in Brunei Darussalam: systematics, palaeoenvironment and ecology.

NASA Astrophysics Data System (ADS)

Roslim, Amajida; Briguglio, Antonino; Kocsis, László; Ćorić, Stjepan; Razak, Hazirah

2016-04-01

The geology of Brunei Darussalam is fascinating but difficult to approach: rainforests and heavy precipitation tend to erode and smoothen the landscape limiting rocks exposure, whereas abundant constructions sites and active quarries allow the creation of short time available outcrop, which have to be immediately sampled. The stratigraphy of Brunei Darussalam comprises mainly Neogene sediments deposited in a wave to tide dominated shallow marine environment in a pure siliciclastic system. Thick and heavily bioturbated sandstone layers alternate to claystone beds which occasionally yield an extraordinary abundance and diversity of fossils. The sandstones, when not bioturbated, are commonly characterized by a large variety of sedimentary structures (e.g., ripple marks, planar laminations and cross beddings). In this study, we investigate the sediments and the fossil assemblages to record the palaeoenvironmental evolution of the shallow marine environment during the late Miocene, in terms of sea level change, chemostratigraphy and sedimentation rate. The study area is one of the best in terms of accessibility, extension, abundance and preservation of fossils; it is located in the region -'Bukit Ambug' (Ambug Hill), Tutong District. The fossils fauna collected encompasses mollusks, decapods, otoliths, shark and ray teeth, amber, foraminifera and coccolithophorids. In this investigation, sediment samples were taken along a section which measures 62.5 meters. A thick clay layer of 9 meters was sampled each 30 cm to investigate microfossils occurrences. Each sample was treated in peroxide and then sieved trough 63 μm, 150μm, 250μm, 450μm, 600μm, 1mm and 2mm sieves. Results point on the changes in biodiversity of foraminifera along the different horizons collected reflecting sea level changes and sediment production. The most abundant taxa identified are Pseoudorotalia schroeteriana, Ampistegina lessonii, Elphidium advenum, Quinqueloculina sp., Bolivina sp., Globigerina sp. Coccolithophorids assemblage recovered from one horizon dates the sediment to the biozone NN11a due to the presence of Discoaster berggrenii and D. quinqueramus, which are both also warm water indicators. The absence of Amaurolithus primus reduces the stratigraphic range to the uppermost Tortonian only (˜7.5-8 Ma).

The palaeoecologic and biostratigraphic evaluation of Middle Miocene freshwater sediments and microfossils near Denkendorf (Bavaria)

NASA Astrophysics Data System (ADS)

Pirkenseer, C.; Reichenbacher, B.

2009-04-01

Isolated freshwater sediments that partially cover the Jurassic limestones of the Swabian and Franconian Alb represent the northernmost expansion of the Molasse sediments. These sediments represent the analogue to the Brackish Molasse and part of the Upper Freshwater Molasse (Ottnangian to Badenian). Samples of six drillcores from the vicinity of Denkendorf (Franconian Alb, Bavaria) yielded ostracods of the superfamily Cypridoidea, frequent oogonia of charophytes, otoliths of the family Gobiidae, teeth of several taxa of micromammals as well as abundant material of amphibians, reptiles and gastropods. The sediments show a general trend from basal, more clastic influenced deposits to uniformly developed marly sediments with freshwater carbonate intercalations. The acme of microfossil occurrences is associated with the latter section. The palaeoecologic analysis characterises the environment as structured littoral zone (e.g. Pseudocandona steinheimensis, Gyraulus sp., Planorbarius sp., Rana ridibunda, Triturus sp.) of a larger oligo- to mesotrophic (Chara spp., Nitellopsis spp.) low-energy freshwater system under a warm subtropical to tropical climate (Diplocynodon cf. D. styriacus, Channa sp.). The cooccurrence of suboxia- and oligotrophy-tolerant species like Palaeocarassius sp. and Channa sp. may indicate short intervals of regional depletion of oxygene and raise of nutrient content. Mediocypris candonaeformis and Gobius latiformis represent relict species of the preceding Brackwassermolasse. Terrestrial elements include Proboscidea (phalanx), Cervidae (astragalus), land turtles (Testudo sp.) and gastropods (Clausiliidae, Pupillidae, Cepaea sp.). The occurrence of Jurassic xenoclasts and bean iron ore indicate the presence of a tributary system. The faunal and floral assemblages show close affinities to other localities of the Molasse Basin (e.g., Sandelzhausen). In accordance with the depositional history this indicates a palaeogeographic connection with the foreland basin. Furthermore the ostracod assemblage is related to taxa recorded from the Miocene infill of the (isolated) Steinheim meteorite crater (e.g., Pseudocandona steinheimensis). According to the evaluation of the micromammal molars (Megacricetodon cf. M. minor and M. cf. M. bavaricus) the sediments of Denkendorf are attributed to the lower MN5 mammal zone (latest Karpatian to early Badenian) and are thus considered to be younger than the associations found near Hitzhofen and Heitensheim.

A New Late Glacial Site in the Central Appalachians of Virginia. Preliminary Findings From Paleobotany, Palynology, and Geomorphology

NASA Astrophysics Data System (ADS)

Schwartz, B. F.; Upchurch, G. R.; Willard, D. A.; Bernhardt, C. E.; Valella, P. A.

2009-12-01

Thick clay deposits in a recently identified paleo-lake bed in a central Appalachian karst system in Highland County, Virginia have yielded well-preserved pollen and macroflora that provide the opportunity to refine the understanding of Pleistocene climate, vegetation dynamics, and erosion in the region. A radiocarbon date of 22,000 14C yr B.P. on wood fragments near the top of the sequence establishes the age of the sediments. Pollen and plant macrofloras characteristic of modern boreal forests are present in sediments at this site. Pollen assemblages show a dominance of conifers, mostly Pinus banksiana and Picea, with Lycopodium as important ground cover. Leaf fossils sieved from the clay show a dominance of Picea needles and common dicot leaf fragments, suggesting that Pinus is either over-represented in the pollen flora or more distal to the paleo-lake. Macrofossil assemblages sieved from the clay contain a variety of non-leaf remains, including fruits, seeds, mosses, insects, feathers, and fungi. Test augering and geophysical results indicate that these clay deposits are at least 9m and perhaps as much as 15m thick. The amount and temporal distribution of sediment loads to the paleo-lake (a depositional environment) from the surrounding landscape (an erosional environment) will be modeled using analysis of sediment facies in and above (>12m) these clays, combined with sediment volume calculations and drainage basin analysis, and constrained by dates from the sediments themselves. Due to the rare occurrence of still-water depositional environments in the Appalachians, this site provides paleo-climate and sedimentological data that will refine regional models of landscape evolution and incision. This work also has implications for the development and modification of a significant karst system that surrounds and underlies the paleo-lake bed. The same karst system is responsible both for the formation of the paleo-lake (after the drain in a blind valley became plugged), and its later draining and current removal of lake sediments through the underlying karst system.

The Neogene of the Iceland Sea - Paleoenvironmental reconstructions using marine palynomorphs

NASA Astrophysics Data System (ADS)

Schreck, M.; Matthiessen, J.; Stein, R.

2012-04-01

ODP Hole 907A was drilled in the Iceland Sea as the mid-point of a paleoenvironmental transect across the Norwegian-Greenland Sea in order to investigate the response of the Arctic gateway region to the long-term global cooling that occurred after the Miocene Climate Optimum. However, owing to a generally low carbonate deposition/preservation and scarcity of calcareous microfossils in Neogene sediments of the Nordic Seas, the application of these traditionally used microfossils and deduced δ18O and Mg/Ca temperature proxies is strongly hampered. Hence, most previous studies have focussed on reconstructing the paleoceanographic and paleoclimatic history since the onset of large-scale Northern Hemisphere glaciations. On that account, the Miocene and parts of the Pliocene have been largely ignored and the Neogene paleoenvironmental history of the Nordic Seas still remains enigmatic. To bypass the absence of biogenic carbonates, organic-walled microfossils (e.g. dinoflagellate cysts, prasinophyte algae and acritarchs) are required for detailed paleoenvironmental reconstructions on pre-Quaternary timescales since they are continuously present and show relatively high abundance and diversity in the high northern latitudes hemipelagic sediments. ODP Hole 907A in the Iceland Sea, located close to the growing ice sheets, experienced the effects of sea-ice cover, migrating wind fronts and ocean currents, thus being a sensitive area with respect to global climate. In this context, Neogene climate deterioration and associated reorganisation of global ocean circulation must have led to alterations in the palynomorph association and may have affected turnover in species composition. Here we present a comparatively high-resolution palynomorph record from the almost continuous Middle Miocene to Late Pliocene sediment sequence of ODP Hole 907A in the Iceland Sea. Its pristine paleomagnetic record provides the unique opportunity for detailed investigations on how palynomorph assemblages alter in response to the major Cenozoic climate transition. The analysed sequence is characterized by a general long-term trend from a diverse middle Miocene palynomorph assemblage towards the impoverished (glacial) assemblages of the late Pliocene, clearly reflecting the prevailing Neogene cooling. However, superimposed on this trend several short-term changes in diversity, abundance and assemblage composition, particularly pronounced in the late Miocene and Pliocene, have punctuated the long-term decline. We identified different assemblages and distinctive suites of acmes, proving considerable changes in the physical characteristics of surface water masses that presumably reflect both, globally recognized trends and more local events. Ecostratigraphic interpretations based on these changes allowed us to identify several paleoceanographic and paleoclimatic signals, which provide new insights into the paleoenvironmental evolution of the Nordic Seas during middle and late Neogene times.

77 FR 32573 - Takes of Marine Mammals Incidental to Specified Activities; Construction and Race Event...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-06-01

... operations, support space, media operations, hospitality services, sponsored commercial space, and...). Intertidal habitats in the Central Bay, or those that lie between low and high tides, include sandy beaches... sediment and hard substrate habitat. Soft bottom substrate ranges between soft mud with high silt and clay...

Diatom evidence for the onset of Pliocene cooling from AND-1B, McMurdo Sound, Antarctica

USGS Publications Warehouse

Riesselman, Christina; Dunbar, R. B.

2013-01-01

The late Pliocene, ~ 3.3–3.0 Ma, is the most recent interval of sustained global warmth in the geologic past. This window is the focus of climate reconstruction efforts by the U.S. Geological Survey's Pliocene Research, Interpretation, and Synoptic Mapping (PRISM) Data/Model Cooperative, and may provide a useful climate analog for the coming century. Reconstructions of past surface ocean conditions proximal to the Antarctic continent are essential to understanding the sensitivity of the cryosphere to this key interval in Earth's climate evolution. An exceptional marine sediment core collected from the southwestern Ross Sea (78° S), Antarctica, during ANDRILL's McMurdo Ice Shelf Project preserves evidence of dramatic fluctuations between grounded ice and productive, open ocean conditions during the late Pliocene, reflecting orbitally-paced glacial/interglacial cycling. In this near-shore record, diatom-rich sediments are recovered from interglacial intervals; two of these diatomites, from ~ 3.2 Ma and 3.03 Ma, are within the PRISM chronologic window. The diatom assemblages identified in PRISM-age late Pliocene diatom-rich sediments are distinct from those in mid-Pliocene and later Pliocene/Pleistocene intervals recovered from AND-1B, and comprise both extant taxa with well-constrained ecological preferences and a diverse extinct flora, some members of which are previously undescribed from Antarctic sediments. Both units are dominated by Chaetoceros resting spores, an indicator of high productivity and stratification that is present at much lower abundance in materials both older and younger than the PRISM-age sediments. Newly described species of the genus Fragilariopsis, which first appear in the AND-1B record at 3.2 Ma, are the most abundant extinct members of the PRISM-age assemblages. Other extant species with established environmental affinities, such as Fragilariopsis sublinearis, F. curta, Stellarima microtrias, and Thalassiothrix antarctica, are present at lower abundances. Environmental inferences drawn from extant diatom assemblages are in good agreement with those from Chaetoceros resting spores and the Fragilariopsis radiation. All three lines of evidence indicate the onset of late Pliocene cooling in the Ross Sea near-shore environment at 3.2 Ma, with intensification and possible regional persistence of summer sea ice by 3.03 Ma. An important implication of this research is the indication that the Ross Ice Shelf fluctuated dramatically on orbital timescales at a time when nearshore Antarctic conditions were only modestly warmer than present.

Invasion by a Japanese marine microorganism in western North America

USGS Publications Warehouse

McGann, M.; Sloan, D.; Cohen, A.N.

2000-01-01

The earliest record in western North America of Trochammina hadai Uchio, a benthic foraminifer common in Japanese estuaries, is from sediment collected in Puget Sound in 1971. It was first found in San Francisco Bay in sediment samples taken in 1983, and since 1986 has been collected at 91% of the sampled sites in the Bay, constituting up to 93% of the foraminiferal assemblage at individual sites. The species is also present in recent sediment samples from 12 other sites along the west coast of North America. The evidence indicates that T. hadai is a recent introduction to San Francisco Bay, and is probably also not native to the other North American sites. Trochammina hadai was probably transported from Japan in ships' ballast tanks, in mud associated with anchors, or in sediments associated with oysters imported for mariculture. Its remarkable invasion of San Francisco Bay suggests the potential for massive, rapid invasions by other marine microorganisms.

Baseline study of the spatio-temporal patterns of reef fish assemblages prior to a major mining project in New Caledonia (South Pacific).

PubMed

Chabanet, Pascale; Guillemot, Nicolas; Kulbicki, Michel; Vigliola, Laurent; Sarramegna, Sébastien

2010-01-01

From 2008 onwards, the coral reefs of Koné (New Caledonia) will be subjected to a major anthropogenic perturbation linked to development of a nickel mine. Dredging and sediment runoff may directly damage the reef environment whereas job creation should generate a large demographic increase and thus a rise in fishing activities. This study analyzed reef fish assemblages between 2002 and 2007 with a focus on spatio-temporal variability. Our results indicate strong spatial structure of fish assemblages through time. Total species richness, density and biomass were highly variable between years but temporal variations were consistent among biotopes. A remarkable spatio-temporal stability was observed for trophic (mean 4.6% piscivores, 53.1% carnivores, 30.8% herbivores and 11.4% planktivores) and home range structures of species abundance contributions. These results are discussed and compared with others sites of the South Pacific. For monitoring perspectives, some indicators related to expected disturbances are proposed. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

A vertical wall in the Whittard Canyon with a novel community assemblage

NASA Astrophysics Data System (ADS)

Johnson, Mark; White, Martin; Wilson, Annette; Wuerzberg, Laura; Schwabe, Enrico; Folch, Helka; Allcock, Louise

2013-04-01

We describe a hitherto unreported community from a vertical wall in the Whittard Canyon system on the Atlantic Margin. The wall extended vertically for about 100 m from approximately 750 m depth. We explored the wall with an ROV and discovered an assemblage cominated by large limid bivalves Acesta excavata and deep-water oysters Neopycnodonte zibrowii at very high densities, particularly at overhangs. The assemblage also contained deep-water corals (including solitary corals). It had high numbers of flytrap anemones and had many mobile species associated with it including crustaceans such as Paramola cuvieri and Bathynectes longispina, echinoderms and fishes. We took CTD transects in the area of the wall and beam attenuation indicated nepheloid layers present in the water column. The greatest densities of suspended material at the ROV dive site were at the depth of the wall. We hypothesise that internal waves concentrate suspended sediment at the foot of the vertical wall. This may provide the resources to support the high density of large filter feeders at these depths.

Consistent patterns of variation in macrobenthic assemblages and environmental variables over multiple spatial scales using taxonomic and functional approaches.

PubMed

Veiga, Puri; Torres, Ana Catarina; Aneiros, Fernando; Sousa-Pinto, Isabel; Troncoso, Jesús S; Rubal, Marcos

2016-09-01

Spatial variability of environmental factors and macrobenthos, using species and functional groups, was examined over the same scales (100s of cm to >100 km) in intertidal sediments of two transitional water systems. The objectives were to test if functional groups were a good species surrogate and explore the relationship between environmental variables and macrobenthos. Environmental variables, diversity and the multivariate assemblage structure showed the highest variability at the scale of 10s of km. However, abundance was more variable at 10s of m. Consistent patterns were achieved using species and functional groups therefore, these may be a good species surrogate. Total carbon, salinity and silt/clay were the strongest correlated with macrobenthic assemblages. Results are valuable for design and interpretation of future monitoring programs including detection of anthropogenic disturbances in transitional systems and propose improvements in environmental variable sampling to refine the assessment of their relationship with biological data across spatial scales. Copyright © 2016 Elsevier Ltd. All rights reserved.

Impact evaluation of the industrial activities in the Bay of Bakar (Adriatic Sea, Croatia): recent benthic foraminifera and heavy metals.

PubMed

Popadić, Adriana; Vidović, Jelena; Cosović, Vlasta; Medaković, Davorin; Dolenec, Matej; Felja, Igor

2013-11-15

The Bay of Bakar is one of the most heavily polluted bays at the Eastern Adriatic. Three major industrial companies potentially endanger the bay. The concentration of major, minor and trace elements in surface sediments from thirteen stations was discussed in relation to the sediment type and foraminiferal assemblages. The distribution of major elements in the bay is influenced by geological nature of surroundings. Heavy metal distribution depends on pollution sources and on amount of mud fraction: fine-grained sediments are enriched by them in comparison with coarse-grained ones. Different sediment quality criteria complicate the pollution assessment in the bay. Heavy metal concentrations generally fall into allowed depositional values for marine environments; only area in front of the coke plant and the City of Bakar harbor is heavily polluted. Stress-tolerant foraminiferal species dominate at stations with higher concentrations of heavy metals and coarse-grained sediments consist of larger number of epifaunal taxa. Copyright © 2013 Elsevier Ltd. All rights reserved.

Depositional settings and evolution of a fjord system during the carboniferous glaciation in Northwest Argentina

NASA Astrophysics Data System (ADS)

Alonso-Muruaga, Pablo J.; Limarino, Carlos O.; Spalletti, Luis A.; Colombo Piñol, Ferrán

2018-07-01

Fjord systems, represented by glacial diamictites and postglacial transgressive shales, formed in the basins of western Argentina during the late Carboniferous Gondwana glaciation. Well exposed fjord deposits of the Guandacol Formation were studied in the Loma de Los Piojos region (Protoprecordillera), where they fill a 2.9 km wide paleovalley with steep side walls and a relatively flat floor. The valley cross-cuts Lower Devonian sandstones and Mississippian mudstones and sandstones, and provides evidence of glacial abrasion, including striated pavements and glacial microtopography (grooves, ridges, and striae). Based on the analysis of seven sedimentary logs, eight sedimentary facies in the valley fill were recognized: (A) Massive diamictites; (B) Laminated mudstones with dropstones; (C) Stratified diamictites; (D) Clast-supported conglomerates and sandstones; (E) Deformed diamictites, conglomerates and sandstones; (F) Folded diamictites; (G) Mudstones interbedded with sandstones, and (H) Stacked and amalgamated sandstones. These sedimentary facies are grouped into two principal facies assemblages that represent different stages of the paleovalley fill. Assemblage 1 is composed of diamictites (Facies A, C and F), laminated mudstones with dropstones (Facies B), and conglomerates (Facies D and E), which represent glacially influenced sedimentation in the paleovalley. Assemblage 2 represents the paleovalley fill when glacial influence ceased, and comprises laminated mudstones interbedded with sandstones (facies G) and stacked sandstone beds (facies H) that mostly record deltaic sedimentation. Stratigraphic relationships, plant fossils found in the paleovalley walls and palynological assemblages recovered in mudstones of facies D help to establish an early Pennsylvanian age for both the incision and the filling of the paleovalley. The studied paleovalley records an exceptional example of the western Gondwanan glacial to postglacial transition. Due to the continuous stratigraphic succession within the paleovalley as well as palynological, megafloristic and radiometric data, this example provides a complete framework of the late Carboniferous postglacial evolution in western Gondwana.

Record of El Niño in planktonic foraminiferal assemblages from the Gulf of Tehuantepec, Mexico (Eastern Tropical Pacific)

NASA Astrophysics Data System (ADS)

Machain-Castillo, M. L.; Nava-Fernandez, X. A.; Thunell, R.; Tappa, E.

2013-05-01

The planktonic foraminiferal assemblages from two sediment traps deployed in the Gulf of Tehuantepec, Mexico (Eastern Tropical Pacific) during a five year period (2006 to 2010) were recorded. The species abundance data were subjected to a Q-mode factor analysis that depicts alternating associations of planktonic foraminifera, generally related to seasonally varying oceanographic conditions. During winter-spring season, the oceanography of the Gulf of Tehuantepec is driven by strong northern winds that cross the Isthmus of Tehuantepec and produce intense upwelling in the gulf. This upwelling of cold, nutrient-rich waters induces high biological productivity and the dominance of the planktonic foraminiferal species Globigerina bulloides. Summer-fall oceanographic conditions are dominated by the northward flow of the Costa Rica Coastal Current and a stratified water column. Chlorophyll-a concentrations are much lower than during the upwelling season and the Globorotalia menardii assemblage is characteristic. The above pattern was recorded for most of the study period, except during ENSO conditions in winter 2007 and summer-fall of 2009. From mid-January to early March 2007, the assemblage was dominated by G. menardii instead of the typical G. bulloides. This period had the highest sea surface temperatures and lowest surface chlorophyll-a values recorded for the entire five year study period. During the similar time period of ENSO 2010, the G. bulloides assemblage shows the highest scores in the factor analysis, although the G. menardii assemblage also has somewhat high scores. Temperature is slightly lower and chlorophyll-a values are slightly higher than during 2007, suggesting the conditions were not strong enough to induce a change in faunal dominance. During ENSO 2009 (July 8th to November 12th), the summer-fall dominant assemblage of Globorotalia menardii was replaced by the Globigerinoides ruber - Globigerinita glutinata assemblage, associated to the summer-fall highest average temperatures and lowest chlorophyll-a concentrations at the studied site.

Effects of management legacies on stream fish and aquatic benthic macroinvertebrate assemblages

USGS Publications Warehouse

Quist, Michael C.; Schultz, Randall D.

2014-01-01

Fish and benthic macroinvertebrate assemblages often provide insight on ecological conditions for guiding management actions. Unfortunately, land use and management legacies can constrain the structure of biotic communities such that they fail to reflect habitat quality. The purpose of this study was to describe patterns in fish and benthic macroinvertebrate assemblage structure, and evaluate relationships between biota and habitat characteristics in the Chariton River system of south-central Iowa, a system likely influenced by various potential management legacies (e.g., dams, chemical removal of fishes). We sampled fishes, benthic macroinvertebrates, and physical habitat from a total of 38 stream reaches in the Chariton River watershed during 2002–2005. Fish and benthic macroinvertebrate assemblages were dominated by generalist species tolerant of poor habitat quality; assemblages failed to show any apparent patterns with regard to stream size or longitudinal location within the watershed. Metrics used to summarize fish assemblages and populations [e.g., presence–absence, relative abundance, Index of Biotic Integrity for fish (IBIF)] were not related to habitat characteristics, except that catch rates of piscivores were positively related to the depth and the amount of large wood. In contrast, family richness of benthic macroinvertebrates, richness of Ephemeroptera, Trichoptera, and Plecoptera taxa, and IBI values for benthic macroinvertebrates (IBIBM) were positively correlated with the amount of overhanging vegetation and inversely related to the percentage of fine substrate. A long history of habitat alteration by row-crop agriculture and management legacies associated with reservoir construction has likely resulted in a fish assemblage dominated by tolerant species. Intolerant and sensitive fish species have not recolonized streams due to downstream movement barriers (i.e., dams). In contrast, aquatic insect assemblages reflected aquatic habitat, particularly the amount of overhanging vegetation and fine sediment. This research illustrates the importance of using multiple taxa for biological assessments and the need to consider management legacies when investigating responses to management and conservation actions.

Effects of Management Legacies on Stream Fish and Aquatic Benthic Macroinvertebrate Assemblages

NASA Astrophysics Data System (ADS)

Quist, Michael C.; Schultz, Randall D.

2014-09-01

Fish and benthic macroinvertebrate assemblages often provide insight on ecological conditions for guiding management actions. Unfortunately, land use and management legacies can constrain the structure of biotic communities such that they fail to reflect habitat quality. The purpose of this study was to describe patterns in fish and benthic macroinvertebrate assemblage structure, and evaluate relationships between biota and habitat characteristics in the Chariton River system of south-central Iowa, a system likely influenced by various potential management legacies (e.g., dams, chemical removal of fishes). We sampled fishes, benthic macroinvertebrates, and physical habitat from a total of 38 stream reaches in the Chariton River watershed during 2002-2005. Fish and benthic macroinvertebrate assemblages were dominated by generalist species tolerant of poor habitat quality; assemblages failed to show any apparent patterns with regard to stream size or longitudinal location within the watershed. Metrics used to summarize fish assemblages and populations [e.g., presence-absence, relative abundance, Index of Biotic Integrity for fish (IBIF)] were not related to habitat characteristics, except that catch rates of piscivores were positively related to the depth and the amount of large wood. In contrast, family richness of benthic macroinvertebrates, richness of Ephemeroptera, Trichoptera, and Plecoptera taxa, and IBI values for benthic macroinvertebrates (IBIBM) were positively correlated with the amount of overhanging vegetation and inversely related to the percentage of fine substrate. A long history of habitat alteration by row-crop agriculture and management legacies associated with reservoir construction has likely resulted in a fish assemblage dominated by tolerant species. Intolerant and sensitive fish species have not recolonized streams due to downstream movement barriers (i.e., dams). In contrast, aquatic insect assemblages reflected aquatic habitat, particularly the amount of overhanging vegetation and fine sediment. This research illustrates the importance of using multiple taxa for biological assessments and the need to consider management legacies when investigating responses to management and conservation actions.

Effects of management legacies on stream fish and aquatic benthic macroinvertebrate assemblages.

PubMed

Quist, Michael C; Schultz, Randall D

2014-09-01

Fish and benthic macroinvertebrate assemblages often provide insight on ecological conditions for guiding management actions. Unfortunately, land use and management legacies can constrain the structure of biotic communities such that they fail to reflect habitat quality. The purpose of this study was to describe patterns in fish and benthic macroinvertebrate assemblage structure, and evaluate relationships between biota and habitat characteristics in the Chariton River system of south-central Iowa, a system likely influenced by various potential management legacies (e.g., dams, chemical removal of fishes). We sampled fishes, benthic macroinvertebrates, and physical habitat from a total of 38 stream reaches in the Chariton River watershed during 2002-2005. Fish and benthic macroinvertebrate assemblages were dominated by generalist species tolerant of poor habitat quality; assemblages failed to show any apparent patterns with regard to stream size or longitudinal location within the watershed. Metrics used to summarize fish assemblages and populations [e.g., presence-absence, relative abundance, Index of Biotic Integrity for fish (IBIF)] were not related to habitat characteristics, except that catch rates of piscivores were positively related to the depth and the amount of large wood. In contrast, family richness of benthic macroinvertebrates, richness of Ephemeroptera, Trichoptera, and Plecoptera taxa, and IBI values for benthic macroinvertebrates (IBIBM) were positively correlated with the amount of overhanging vegetation and inversely related to the percentage of fine substrate. A long history of habitat alteration by row-crop agriculture and management legacies associated with reservoir construction has likely resulted in a fish assemblage dominated by tolerant species. Intolerant and sensitive fish species have not recolonized streams due to downstream movement barriers (i.e., dams). In contrast, aquatic insect assemblages reflected aquatic habitat, particularly the amount of overhanging vegetation and fine sediment. This research illustrates the importance of using multiple taxa for biological assessments and the need to consider management legacies when investigating responses to management and conservation actions.

Epibenthic assemblages of the Tail of the Grand Bank and Flemish Cap (northwest Atlantic) in relation to environmental parameters and trawling intensity

NASA Astrophysics Data System (ADS)

Murillo, Francisco Javier; Serrano, Alberto; Kenchington, Ellen; Mora, José

2016-03-01

The structure, composition and distribution of epibenthic invertebrate assemblages on the Tail of the Grand Bank of Newfoundland and Flemish Cap (northwest Atlantic) were sampled using depth-stratified trawls. Faunal analysis of 152 uniquely identified taxa produced hierarchical synoptic tables of species associations with diagnostic indicators based on species fidelity. Twelve spatially coherent epibenthic megafaunal assemblages were identified, each with relatively sharp faunal boundaries and unique species attributes. These assemblages were shown a posteriori through ANOSIM to have statistically different species compositions, and were nested within three major regional-scale faunal groups: (I) the continental shelf of the Tail of the Grand Bank, typified by the sea cucumber Cucumaria frondosa and the sand dollar Echinarachnius parma; (II) the upper slope of the Grand Bank and top of Flemish Cap, typified by the sponges Radiella hemisphaerica and Iophon piceum and the sea star Ceramaster granularis; and (III) the lower slope of the Grand Bank and Flemish Cap, typified by the sea urchin Phormosoma placenta, and the sea pens Anthoptilum grandiflorum and Funiculina quadrangularis. Comparisons with literature on benthic species associations from a half century ago suggest that the assemblages identified herein have persisted in the area at least for decades. Detrended correspondence analysis (DCA) identified a well-defined biological gradient along the first axis with very high species turn-over. Ten environmental variables (including Trawling Intensity) were significantly correlated with the ordinated data. At one extreme the continental shelf faunal group (I) was associated with shallow depth (mostly, less than 200 m), coarse sediments and cold and fresh water associated with the Labrador Current. At the other extreme the lower slope faunal group (III; stations below 500-600 m throughout the study area) was strongly associated with deep water, muddy sediments, and warmer and saltier water. Conditional tests under a step-wise model identified the percentage of mud as having the greatest explanatory power (40%) of the tested environmental variables. Trawling Intensity explained 11% of the variation in the full data set in marginal tests. Species richness in the deep water assemblages (Cluster III) was significantly and negatively correlated with fishing intensity. The species most directly associated with high trawling intensity in the DCA were the hard-shelled scavenging and predatory gastropods and a thick-shelled bivalve, consistent with expectations based on the trawling impact literature. Our study fills a critical knowledge gap in this important fishing area, and our novel regional-scale maps of the epibenthic assemblages will facilitate the development of ecosystem-based models linking benthic and pelagic systems and inform biodiversity conservation.

Microscale evidence of liquefaction and its potential triggers during soft-bed deformation within subglacial traction tills

NASA Astrophysics Data System (ADS)

Phillips, Emrys R.; Evans, David J. A.; van der Meer, Jaap J. M.; Lee, Jonathan R.

2018-02-01

Published conceptual models argue that much of the forward motion of modern and ancient glaciers is accommodated by deformation of soft-sediments within the underlying bed. At a microscale this deformation results in the development of a range of ductile and brittle structures in water-saturated sediments as they accommodate the stresses being applied by the overriding glacier. Detailed micromorphological studies of subglacial traction tills reveal that these polydeformed sediments may also contain evidence of having undergone repeated phases of liquefaction followed by solid-state shear deformation. This spatially and temporally restricted liquefaction of subglacial traction tills lowers the shear strength of the sediment and promotes the formation of "transient mobile zones" within the bed, which accommodate the shear imposed by the overriding ice. This process of soft-bed sliding, alternating with bed deformation, facilitates glacier movement by way of 'stick-slip' events. The various controls on the slip events have previously been identified as: (i) the introduction of pressurised meltwater into the bed, a process limited by the porosity and permeability of the till; and (ii) pressurisation of porewater as a result of subglacial deformation; to which we include (iii) episodic liquefaction of water-saturated subglacial traction tills in response to glacier seismic activity (icequakes), which are increasingly being recognized as significant processes in modern glaciers and ice sheets. As liquefaction operates only in materials already at very low values of effective stress, its process-form signatures are likely indicative of glacier sub-marginal tills.

Suprabenthic assemblages from the Capbreton area (SE Bay of Biscay). Faunal recovery after a canyon turbidity disturbance

NASA Astrophysics Data System (ADS)

Frutos, Inmaculada; Sorbe, Jean Claude

2017-12-01

In the Capbreton area, suprabenthic assemblages were sampled with a sledge towed over the bottom, at different sites located within the upper part of a 'gouf-type' canyon (8 hauls between 642 m and 797 m, on the axis of the thalweg or on flat perched flank terraces such as site K), on the northern adjacent open slope (2 hauls between 500 and 567 m) and on the northern adjacent shelf margin (2 hauls between 151 m and 158 m). A multivariate analysis carried on the faunal data discriminated different assemblages in this area: a near-canyon shelf assemblage (55 species, mainly amphipods and decapods; 3496 ind./100 m2, 40% mysids; dominant species: Nyctiphanes couchii, Leptomysis gracilis, Weswoodilla rectirostris, Anchialina agilis, Scopelocheirus hopei and Philocheras bispinosus); an open slope assemblage (111 species, mainly amphipods and isopods; 249 ind./100 m2, 36% amphipods; dominant species: Disconectes phalangium, Munnopsurus atlanticus and Boreomysis arctica); a canyon E assemblage (129 species, mainly amphipods, mysids and cumaceans; 1172 ind./100 m2, 58% amphipods; dominant species: Melphidippa sp. B, Chelator insignis); a canyon E' assemblage (107 species, mainly amphipods and mysids; 507 ind./100 m2, 73% amphipods; dominant species: Cleonardopsis carinata, Bonnierella abyssorum, Rhachotropis caeca and Arcturopsis giardi); and a temporary canyon assemblage at site K (34 species, mainly amphipods and mysids; 899 ind./100 m2, 85% amphipods; dominant species: Tmetomyx similis, Caeconyx caeculus, Nebalia sp. A and Cleonardopsis carinata). Site K was sampled only four months after a turbidity event, detected on sediment cores (18 cm thick Bouma sequence) taken during the same cruise and triggered by the violent storm ('ouragan Martin', wind up to 200 km/h) which affected the French Atlantic coast on 27 December 1999. The corresponding suprabenthic assemblage showed evidence of deep structural changes after this catastrophic event, characterized by relative low values of species richness and diversity indices and by the exceptional dominance of opportunistic pioneer colonizers such as the scavenger Tmetonyx similis (61% of total density). Partial assemblage recovery was noticed 18 months after the turbidite deposition, attested by higher values of structural indices and by the inclusion of the corresponding sample within the climax canyon assemblage cluster.

Palynology of latest Neogene (Middle Miocene to late Pliocene) strata in the Delmarva Peninsula of Maryland and Virginia

USGS Publications Warehouse

Sirkin, L.; Owens, J.P.

1998-01-01

Palynology of Miocene and Pliocene formations in the Delmarva Peninsula of Maryland and Virginia reveals a significant representation of exotic pollen interspersed in pollen assemblages that are otherwise comparable to those from the modern vegetation of the Mid-Alantic coastal plain region. The late Tertiary arboreal pollen (AP) assemblages are dominated by oak, hickory, pine, birch and alder with minor amounts of mid- and southern coastal tree taxa, as well as minor spruce and hemlock and a trace of fir. Nonarboreal pollen (NAP) include grass, sedge, composite and aquatic taxa. Exotic pollen in these assemblages represent plants now foreign to this region. They may be placed in three categories. First, there are extinct forms, such as Labrapollis, Plicatopollis, and Multiporopollenites, that can be traced from the Cretaceous or Early Tertiary into the Late Tertiary. The second group includes forms, such as Podocarpus, Engelhardtia, Pterocarya, Ephedra, Eucommia, Ulmus-Zelkova, Glyptostrobus, Palmae, and Cyathea, that are not found in this region today and not found in early Pleistocene sediments in the eastern United States. Many of these taxa are subtropical or greatly restricted in geographic range. A third group of exotics, mainly Cyrilla, Planera, Gordonia, Jussiaea, and Sapotacaea, including Minusops, are generally found south of the study area or have their northern limit here at this time. The lack of the extinct or distant exotics in early to mid-Pleistocene sediments in the mid-Atlantic coastal plain and the last appearance of Pterocarya, as the last exotic taxon in the early Pleistocene of western Europe, support the stratigraphic assignment of the Pliocene units. The number of exotic taxa diminish markedly between the Miocene pollen assemblages and those of the Late Pliocene. Climatic fluctuations characterize the Late Tertiary environments. The Miocene, for example, incorporates a warming trend between the upper, middle Miocene and the Manokin beds and the late Miocene of the Pokomoke beds. The late Miocene was probably somewhat warner than the present climate in the Delmarva region. This trend is based on the presence of colder climate indicators, mainly spruce and hemlock, in the Manokin pollen record. The two distinct pollen assemblages constitute two pollen zones. Similarly, the Pliocene pollen record also shows a warming trend. The pollen zone of the Yorktown Formation of the early Pliocene age contains the colder climate indicators spruce and hemlock. The Beaverdam and Walston formation of late Pliocene age contain pollen assemblages that reflect climatic conditions warmer than the present time.

Benthic foraminifera records in marine sediments during the Holocene from Pescadero basin, Gulf of California, Mexico

NASA Astrophysics Data System (ADS)

Valdez, M.; Perez-Cruz, L. L.; Roy, P.; Monreal, M.; Fenero, R.

2013-05-01

Gravity core T-56 (256 cm length) was collected in Pescadero Basin located on the western side of the Gulf of California within the oxygen minim zone (OMZ) at 597 cm depth, aboard of the R/V "El Puma". Pescadero basin is located at mouth of the gulf; because of its location is sensitive to record the changes in the gulf and in the Eastern Pacific Ocean. The sedimentary sequence is analyzed to contribute to the understanding the oceanographic variability in the southern part of the gulf of California during the Holocene using benthic foraminifera assemblages and organic carbon as proxies of organic matter flux and bottom water oxygenation. In general, the core is characterized by silty-clay sediments, and it exhibits a turbidite between 198 and 134 cm, distinguished by sandy sediments and reworking material. From 134 cm to the top shows a visible laminated structure. The initial chronology is based on three AMS radiocarbon dates, and estimated sedimentation rates are 0.22 and 0.19 mm/yr for the first 32 cm of the core. Six radiocarbon dates are in progress. Preliminary results of benthic foraminiferal assemblages showed that species of Bolivina are dominated, mainly megalospheric forms, from 134 cm to top of the core. They are small and thin-shelled forms (e.g., Bolivina subadvena, Bolivina minuta, Bolivina seminuda, Bolivina plicata), and also Buliminella, Cassidulina and Epistominella are abundant. In particular, species of Bolivina are environmental indicators and exhibit a typical reproductive dimorphism. The predominance of the genus Bolivina suggest organic flux variations, because of the productivity changes that might be related to changes in ocean circulation and in the environmental variability in the region.

Microphytobenthic biomass, species composition and nutrient availability in sublittoral sediments of the Gulf of Trieste (northern Adriatic Sea)

NASA Astrophysics Data System (ADS)

Cibic, Tamara; Blasutto, Oriana; Falconi, Claus; Fonda Umani, Serena

2007-10-01

Monthly sampling was carried out during a 2-year study (2003-2004) in order to analyse benthic microalgal composition, abundance (ABU) and biomass (BIOM). Temperature and photosynthetically available radiation (PAR) at the bottom were recorded during sampling. In the overlying water nitrite (NO 2-), nitrate (NO 3-), ammonium (NH 4+), phosphate (PO 43-) and silicate (SiO 3-) were analysed. The sediment consisted of 8.2% sand, 18.3% clay and 73.5% silt. BIOM showed its maximum in August 2004, while the minimum was recorded in October 2003. The microphytobenthic community was mainly composed of diatoms. Among all the 103 Bacillariophyceae taxa identified in the sediment, we distinguished 67 benthic, 8 epiphytic and 8 planktonic species. Among diatoms Nitzschia and Navicula were the most abundant genera (30.8 and 26.2%, respectively). The linear regression between total diatom ABU and PAR was statistically significant ( r = 0.66, p < 0.001). A seasonal pattern of monthly samplings was highlighted both from cluster analysis and principal component analysis (PCA). The latter revealed two diatom assemblages: a winter assemblage and a spring-summer one. The genera Diploneis and Pinnularia showed an inverse relation against temperature. Considering the nutrient ratios the development of microphytobenthos (MPB) appeared to be potentially co-limited by Si and P almost throughout the study period. A clear inverse relation between NO 2-, NO 3- and BIOM was emphasised by the moving average and the PCA. The inverse relation among nutrients and light availability suggested that the photosynthetic activity of benthic diatoms in spring and summer may be one of the processes controlling sediment-water nutrient fluxes.

Integral assessment of pollution in the Suquía River (Córdoba, Argentina) as a contribution to lotic ecosystem restoration programs.

PubMed

Merlo, C; Abril, A; Amé, M V; Argüello, G A; Carreras, H A; Chiappero, M S; Hued, A C; Wannaz, E; Galanti, L N; Monferrán, M V; González, C M; Solís, V M

2011-11-01

The Suquía River lower-middle basin (Córdoba, Argentina) is subject to a strong anthropic impact because it receives pollutants from different sources (industries, wastewaters, heavy traffic, agricultural land use, etc.) We have assessed the degree of watershed degradation of Suquía River lower-middle sections through the analysis of different ecosystem compartments (air, water, riparian soil, sediments and biota), in order to provide useful data to be considered in future river restoration programs. Four study sites were selected along the river (La Calera city, Córdoba city, Corazón de María village and Río Primero city) which were sampled during the low- and high-water flow periods. We analyzed: a) chemical and physical characteristics of water, sediments, and riparian soil; b) heavy metal content of water and sediments, and c) semi-volatile organic compounds in air. Besides, pollutant bioindicators such as fish assemblages, lichens (Usnea amblyoclada), vascular plants (Tradescantia pallida), and microorganisms (fecal coliform and Escherichia coli) were used to further assess the status of the river. All analyzed ecological compartments were affected by water pollution, particularly, fish assemblages, sediments and riparian soils by heavy metal and coliform bacteria. Moreover, we detected a possible contribution of sulfur and a high pollutant content in air that merit further research about other air-water exchanges. Accordingly, we strongly suggest that an action to restore or remediate the anthropic effect on the Suquía River be extended to all possible compartments along the river. Copyright © 2011 Elsevier B.V. All rights reserved.

Rock magnetic and geochemical evidence for authigenic magnetite formation via iron reduction in coal-bearing sediments offshore Shimokita Peninsula, Japan (IODP Site C0020)

NASA Astrophysics Data System (ADS)

Phillips, Stephen C.; Johnson, Joel E.; Clyde, William C.; Setera, Jacob B.; Maxbauer, Daniel P.; Severmann, Silke; Riedinger, Natascha

2017-06-01

Sediments recovered at Integrated Ocean Drilling Program (IODP) Site C0020, in a fore-arc basin offshore Shimokita Peninsula, Japan, include numerous coal beds (0.3-7 m thick) that are associated with a transition from a terrestrial to marine depositional environment. Within the primary coal-bearing unit (˜2 km depth below seafloor) there are sharp increases in magnetic susceptibility in close proximity to the coal beds, superimposed on a background of consistently low magnetic susceptibility throughout the remainder of the recovered stratigraphic sequence. We investigate the source of the magnetic susceptibility variability and characterize the dominant magnetic assemblage throughout the entire cored record, using isothermal remanent magnetization (IRM), thermal demagnetization, anhysteretic remanent magnetization (ARM), iron speciation, and iron isotopes. Magnetic mineral assemblages in all samples are dominated by very low-coercivity minerals with unblocking temperatures between 350 and 580°C that are interpreted to be magnetite. Samples with lower unblocking temperatures (300-400°C), higher ARM, higher-frequency dependence, and isotopically heavy δ56Fe across a range of lithologies in the coal-bearing unit (between 1925 and 1995 mbsf) indicate the presence of fine-grained authigenic magnetite. We suggest that iron-reducing bacteria facilitated the production of fine-grained magnetite within the coal-bearing unit during burial and interaction with pore waters. The coal/peat acted as a source of electron donors during burial, mediated by humic acids, to supply iron-reducing bacteria in the surrounding siliciclastic sediments. These results indicate that coal-bearing sediments may play an important role in iron cycling in subsiding peat environments and if buried deeply through time, within the subsequent deep biosphere.

Organic matter composition and macrofaunal diversity in sediments of the Condor Seamount (Azores, NE Atlantic)

NASA Astrophysics Data System (ADS)

Bongiorni, Lucia; Ravara, Ascensão; Parretti, Paola; Santos, Ricardo S.; Rodrigues, Clara F.; Amaro, Teresa; Cunha, Marina R.

2013-12-01

In recent years increasing knowledge has been accumulated on seamounts ecology; however their sedimentary environments and associated biological communities remain largely understudied. In this study we investigated quantity and biochemical composition of organic matter and macrofaunal diversity in sediments of the Condor Seamount (NE Atlantic, Azores). In order to test the effect of the seamount on organic matter distribution, sediment samples were collected in 6 areas: the summit, the northern and southern flanks and bases, and in an external far field site. Macrofauna abundance and diversity were investigated on the summit, the southern flank and in the far field site. The organic matter distribution reflected the complex hydrodynamic conditions occurring on the Condor. Concentrations of organic matter compounds were generally lower on the whole seamount than in the far field site and on the seamount summit compared to flanks and bases. A clear difference was also evident between the northern and southern slopes of the Condor, suggesting a role of the seamount in conditioning sedimentation processes and distribution of food resources for benthic consumers. Macrofauna assemblages changed significantly among the three sampling sites. High abundance and dominance, accompanied by low biodiversity, characterized the macrofauna community on the Condor summit, while low dominance and high biodiversity were observed at the flank. Our results, although limited to five samples on the seamount and two off the seamount, do not necessarily support the paradigm that seamounts are more biodiverse than the surrounding seafloor. However, the abundance (and biomass), functional diversity and taxonomical distinctiveness of the macrofaunal assemblages from the Condor Seamount suggest that seamounts habitats may play a relevant role in adding to the regional biodiversity.

Urban sprawl leaves its PAH signature

USGS Publications Warehouse

Van Metre, P.C.; Mahler, B.J.; Furlong, E.T.

2000-01-01

The increasing vehicle traffic associated with urban sprawl in the United States is frequently linked to degradation of air quality, but its effect on aquatic sediment is less well-recognized. This study evaluates trends in PAHs, a group of contaminants with multiple urban sources, in sediment cores from 10 reservoirs and lakes in six U.S. metropolitan areas. The watersheds chosen represent a range in degree and age of urbanization. Concentrations of PAHs in all 10 reservoirs and lakes increased during the past 20-40 years. PAH contamination of the most recently deposited sediment at all sites exceeded sediment-quality guidelines established by Environment Canada, in some cases by several orders of magnitude. These results add a new chapter to the story told by previous coring studies that reported decreasing concentrations of PAHs after reaching highs in the 1950s. Concurrent with the increase in concentrations is a change in the assemblage of PAHs that indicates the increasing trends are driven by combustion sources. The increase in PAH concentrations tracks closely with increases in automobile use, even in watersheds that have not undergone substantial changes in urban land-use levels since the 1970s.The increasing vehicle traffic associated with urban sprawl in the United States is frequently linked to degradation of air quality, but its effect on aquatic sediment is less well-recognized. This study evaluates trends in PAHs, a group of contaminants with multiple urban sources, in sediment cores from 10 reservoirs and lakes in six U.S. metropolitan areas. The watersheds chosen represent a range in degree and age of urbanization. Concentrations of PAHs in all 10 reservoirs and lakes increased during the past 20-40 years. PAH contamination of the most recently deposited sediment at all sites exceeded sediment-quality guidelines established by Environment Canada, in some cases by several orders of magnitude. These results add a new chapter to the story told by previous coring studies that reported decreasing concentrations of PAHs after reaching highs in the 1950s. Concurrent with the increase in concentrations is a change in the assemblage of PAHs that indicates the increasing trends are driven by combustion sources. The increase in PAH concentrations tracks closely with increases in automobile use, even in watersheds that have not undergone substantial changes in urban land-use levels since the 1970s.

Miocene vertebrates and North Florida shorelines

USGS Publications Warehouse

Olsen, S.J.

1968-01-01

Vertebrate fossils from ten localities, spread across northern Florida, give evidence of shorelines and deltas that have previously been established on geologic evidence or invertebrates alone. Terrestrial mammal remains, in association with shallow-water forms, indicate a deltaic assemblage and in several instances specific animals suggest restricted water depths at the time of sediment deposition. Fortunately diagnostic fragments of Miocene horses, Merychippus and Parahippus, are present in these beds, allowing for a rather close age evaluation of these sediments. Adequate fossil material has been collected from these localities to suggest the past environment and ecological conditions for the forms represented. By utilizing a suggested course of experiments with stream table apparatus it is possible to use the orientation of the fossil vertebrate remains as aids in determining past conditions of sediment accumulation. ?? 1968.

Earthquake-induced soft-sediment deformation structures in Late Pleistocene lacustrine deposits of Issyk-Kul lake (Kyrgyzstan)

NASA Astrophysics Data System (ADS)

Gladkov, A. S.; Lobova, E. U.; Deev, E. V.; Korzhenkov, A. M.; Mazeika, J. V.; Abdieva, S. V.; Rogozhin, E. A.; Rodkin, M. V.; Fortuna, A. B.; Charimov, T. A.; Yudakhin, A. S.

2016-10-01

This paper discusses the composition and distribution of soft-sediment deformation structures induced by liquefaction in Late Pleistocene lacustrine terrace deposits on the southern shore of Issyk-Kul Lake in the northern Tien Shan mountains of Kyrgyzstan. The section contains seven deformed beds grouped in two intervals. Five deformed beds in the upper interval contain load structures (load casts and flame structures), convolute lamination, ball-and-pillow structures, folds and slumps. Deformation patterns indicate that a seismic trigger generated a multiple slump on a gentle slope. The dating of overlying subaerial deposits suggests correlation between the deformation features and strong earthquakes in the Late Pleistocene.

Distribution and diversity of diatom assemblages in surficial sediments of shallow lakes in Wapusk National Park (Manitoba, Canada) region of the Hudson Bay Lowlands.

PubMed

Jacques, Olivier; Bouchard, Frédéric; MacDonald, Lauren A; Hall, Roland I; Wolfe, Brent B; Pienitz, Reinhard

2016-07-01

The hydrology of shallow lakes (and ponds) located in the western Hudson Bay Lowlands (HBL) is sensitive to climate warming and associated permafrost thaw. However, their biological characteristics are poorly known, which hampers effective aquatic ecosystem monitoring. Located in northern Manitoba along the southwestern coast of Hudson Bay, Wapusk National Park (WNP) encompasses numerous shallow lakes representative of the subarctic zone. We analyzed the distribution and diversity of diatom (microscopic algae; class Bacillariophyceae) assemblages in surficial sediments of 33 lakes located in three different ecozones spanning a vegetation gradient, from NE to SW: the Coastal Fen (CF), the Interior Peat Plateau (IPP), and the Boreal Spruce Forest (BSF). We found significant differences (P < 0.05) in diatom community composition between CF and IPP lakes, and CF and BSF lakes, but not between IPP and BSF lakes. These results are consistent with water chemistry measurements, which indicated distinct limnological conditions for CF lakes. Diatom communities in CF lakes were generally dominated by alkaliphilous taxa typical of waters with medium to high conductivity, such as Nitzschia denticula. In contrast, several IPP and BSF lakes were dominated by acidophilous and circumneutral diatom taxa with preference for low conductivity (e.g., Tabellaria flocculosa, Eunotia mucophila, E. necompacta var. vixcompacta). This exploratory survey provides a first detailed inventory of the diatom assemblages in the WNP region needed for monitoring programs to detect changes in shallow lake ecosystems and ecozonal shifts in response to climate variations.

Effects of grade control structures on fish passage, biological assemblages, and hydraulic environments in western Iowa streams: a multidisciplinary review

USGS Publications Warehouse

Thomas, J.T.; Culler, M.E.; Dermisis, D.C.; Pierce, Clay; Papanicolaou, A.N.; Stewart, T.W.; Larson, C.J.

2011-01-01

Land use changes and channelization of streams in the deep loess region of western Iowa have led to stream channel incision, altered flow regimes, increased sediment inputs, decreased habitat diversity and reduced lateral connectivity of streams and floodplains. Grade control structures (GCSs) are built in streams to prevent further erosion, protect infrastructure and reduce sediment loads. However, GCS can have a detrimental impact on fisheries and biological communities. We review three complementary biological and hydraulic studies on the effects of GCS in these streams. GCS with steep (≥1:4 rise : run) downstream slopes severely limited fish passage, but GCS with gentle slopes (≤1:15) allowed greater passage. Fish assemblages were dominated by species tolerant of degradation, and Index of Biotic Integrity (IBI) scores were indicative of fair or poor biotic integrity. More than 50% of fish species had truncated distributions. After modification of GCS to reduce slopes and permit increased passage, IBI scores increased and several species were detected further upstream than before modification. Total macroinvertebrate density, biomass and taxonomic diversity and abundance of ecologically sensitive taxa were greater at GCS than in reaches immediately upstream, downstream or ≥1 km from GCS. A hydraulic study confirmed results from fish passage studies; minimum depths and maximum current velocities at GCS with gentle slopes (≤1:15) were more likely to meet minimum criteria for catfish passage than GCS with steeper slopes. Multidisciplinary approaches such as ours will increase understanding of GCS-associated factors influencing fish passage, biological assemblage structure and other ecological relationships in streams.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Burwood, R.; Fortems, G.; Mycke, B.

Deposited under lacustrine conditions during the rift-phase opening of the southern Atlantic, the lower Congo Bucomazi Formation is a highly productive source rock sequence. Reaching considerable thickness (1.8 km), a heterogeneous organofacies reflects both rapid accumulation and changing conditions during Early Cretaceous Barremian sedimentation. As a component of organofacies, low resolution studies showed kerogen kinetic parameters (Ea/A) varied widely according to the gross paleoenvironmental conditions prevailing during deposition. As a a general trend, refractory (type I, higher Ea) kerogens of the [open quotes]basin fill[close quotes] Organic Rich Zone (ORZ) give way to more labile (type II, lower Ea) assemblages inmore » the up-section [open quotes]sheet drape[close quotes] sediments. At higher resolution, a considerable fine structure in Ea fluctuation, presumably reflecting micropaleoenvironment control, becomes evident. Using Ea values assembled for the Bucomazi type section, subsidence modeling for a Ponta Vermelha depocenter section showed a wide disparity in behavior. Being more representative of the sheet-drape episode, type II assemblages matured earlier, at lesser overburdens, and provided the initial hydrocarbon charge. For the ORZ assemblages, the dominant type I component was of retarded maturation, only becoming productive at commensurately greater overburdens. Cumulatively, these events merge to provide an extended period of hydrocarbon generation with implications for production of aggregate oils of varied emplacement histories. Significantly, the net effect of the observed Ea contrast results in the less prolific (but more labile) uppermost Bucomazi assuming a more important charging role than the ORZ of superior source richness. The latter can only realize its full potential under the greatest overburdens attainable in the most subsident depocenters.« less

Syn-eruptive, soft-sediment deformation of deposits from dilute pyroclastic density current: triggers from granular shear, dynamic pore pressure, ballistic impacts and shock waves

NASA Astrophysics Data System (ADS)

Douillet, G. A.; Taisne, B.; Tsang-Hin-Sun, E.; Muller, S. K.; Kueppers, U.; Dingwell, D. B.

2015-05-01

Soft-sediment deformation structures can provide valuable information about the conditions of parent flows, the sediment state and the surrounding environment. Here, examples of soft-sediment deformation in deposits of dilute pyroclastic density currents are documented and possible syn-eruptive triggers suggested. Outcrops from six different volcanoes have been compiled in order to provide a broad perspective on the variety of structures: Soufriere Hills (Montserrat), Tungurahua (Ecuador), Ubehebe craters (USA), Laacher See (Germany), and Tower Hill and Purrumbete lakes (both Australia). The variety of features can be classified in four groups: (1) tubular features such as pipes; (2) isolated, laterally oriented deformation such as overturned or oversteepened laminations and vortex-shaped laminae; (3) folds-and-faults structures involving thick (>30 cm) units; (4) dominantly vertical inter-penetration of two layers such as potatoids, dishes, or diapiric flame-like structures. The occurrence of degassing pipes together with basal intrusions suggest fluidization during flow stages, and can facilitate the development of other soft-sediment deformation structures. Variations from injection dikes to suction-driven, local uplifts at the base of outcrops indicate the role of dynamic pore pressure. Isolated, centimeter-scale, overturned beds with vortex forms have been interpreted to be the signature of shear instabilities occurring at the boundary of two granular media. They may represent the frozen record of granular, pseudo Kelvin-Helmholtz instabilities. Their recognition can be a diagnostic for flows with a granular basal boundary layer. Vertical inter-penetration and those folds-and-faults features related to slumps are driven by their excess weight and occur after deposition but penecontemporaneous to the eruption. The passage of shock waves emanating from the vent may also produce trains of isolated, fine-grained overturned beds that disturb the surface bedding without occurrence of a sedimentation phase in the vicinity of explosion centers. Finally, ballistic impacts can trigger unconventional sags producing local displacement or liquefaction. Based on the deformation depth, these can yield precise insights into depositional unit boundaries. Such impact structures may also be at the origin of some of the steep truncation planes visible at the base of the so-called "chute and pool" structures. Dilute pyroclastic density currents occur contemporaneously with seismogenic volcanic explosions. They can experience extremely high sedimentation rates and may flow at the border between traction, granular and fluid-escape boundary zones. They are often deposited on steep slopes and can incorporate large amounts of water and gas in the sediment. These are just some of the many possible triggers acting in a single environment, and they reveal the potential for insights into the eruptive and flow mechanisms of dilute pyroclastic density currents.

Plasticity of an Amorphous Assembly of Elastic Gel Beads

NASA Astrophysics Data System (ADS)

Grosshans, D.; Knaebel, A.; Lequeux, F.

1995-01-01

We have studied the rheological properties of an assembly of swollen gel beads in a lack of solvent. The system is an amorphous assembly of packed soft spheres in a given volume. We have studied the plastic behavior of the system, and interpreted it in terms of bead rearrangements within the assembly. Nous avons étudié les propriétés rhéologiques d'un assemblage de billes de gel gonflées en défaut de solvant. Le système est donc une assemblée amorphe de sphères molles écrasées à volume total constant. Nous avons étudié divers aspects du comportement plastique et nous l'avons interprété en termes de réorganisations de billes dans l'assemblage.

Deep-sea benthic habitats modeling and mapping in a NE Atlantic seamount (Galicia Bank)

NASA Astrophysics Data System (ADS)

Serrano, A.; González-Irusta, J. M.; Punzón, A.; García-Alegre, A.; Lourido, A.; Ríos, P.; Blanco, M.; Gómez-Ballesteros, M.; Druet, M.; Cristobo, J.; Cartes, J. E.

2017-08-01

This study presents the results of seafloor habitat identification and mapping of a NE Atlantic deep seamount. An ;assemble first, predict later; approach has been followed to identify and map the benthic habitats of the Galicia Bank (NW Iberian). Biotic patterns inferred from the survey data have been used to drive the definition of benthic assemblages using multivariate tools. Eight assemblages, four hard substrates and four sedimentary ones, have been described from a matrix of structural species. Distribution of these assemblages was correlated with environmental factors (multibeam and backscatter data) using binomial GAMs. Finally, the distribution model of each assemblage was applied to produce continuous maps and pooled in a final map with the distribution of the main benthic habitats. Depth and substrate type are key factors when determining soft bottom communities, whereas rocky habitat distribution is mainly explained by rock slope and orientation. Enrichment by northern water masses (LSW) arriving to GB and possible zooplankton biomass increase at vertical-steep walls by ;bottom trapping; can explain the higher diversity of habitat providing filter-feeders at slope rocky breaks. These results concerning vulnerable species and habitats, such as Lophelia and Madrepora communities and black and bamboo coral aggregations were the basis of the Spanish proposal of inclusion within the Natura 2000 network. The aim of the present study was to establish the scientific criteria needed for managing and protecting those environmental values.

Distribution and relationships of selected trace metals in molluscs and associated sediments from the Gulf of Aden, Yemen.

PubMed

Szefer, P; Ali, A A; Ba-Haroon, A A; Rajeh, A A; Gełdon, J; Nabrzyski, M

1999-09-01

Concentrations of Cd, Pb, Zn, Cu, Ni, Co, Cr, Mn and Fe in the soft tissue of Turbo coronatus, Acanthopleura haddoni, Ostrea cucullata and Pitar sp., as well as in associated surface sediments (bulk and bioavailable metal concentrations) from the Gulf of Aden, Yemen, were determined by atomic absorption spectrophotometry method. Large differences between size-classes of molluscs in metal concentrations were recorded. Significant spatial differences in metal concentrations in both the soft tissue of the molluscs and associated sediments studied were mostly identified. Statistically significant correlations (p<0.01) between concentrations of selected metals were observed. A slope of the linear regression is significantly higher than unity for Fe (9.91) and Cd (3.45) in A. haddoni and for Ni (4.15) in T. coronatus, suggesting that the bioavailability of these metals is disproportionally increased with a degree of enrichment of the sediments in Fe, Cd and Ni, respectively. A slope constant approximating to unity (1.14) for Cu in A. haddoni relative to its concentration in sediment extract implies that bioavailability of this metal proportionally increased with growing concentrations of its labile forms in the associated sediment. The degree of contamination of Gulf of Aden waters by the metals studied is discussed and the potential ability of molluscs, especially A. haddoni and T. coronatus, as biomonitors of metallic pollutants is postulated.

Role of sediment size and biostratinomy on the development of biofilms in recent avian vertebrate remains

NASA Astrophysics Data System (ADS)

Peterson, Joseph E.; Lenczewski, Melissa E.; Clawson, Steven R.; Warnock, Jonathan P.

2017-04-01

Microscopic soft tissues have been identified in fossil vertebrate remains collected from various lithologies. However, the diagenetic mechanisms to preserve such tissues have remained elusive. While previous studies have described infiltration of biofilms in Haversian and Volkmann’s canals, biostratinomic alteration (e.g., trampling), and iron derived from hemoglobin as playing roles in the preservation processes, the influence of sediment texture has not previously been investigated. This study uses a Kolmogorov Smirnov Goodness-of-Fit test to explore the influence of biostratinomic variability and burial media against the infiltration of biofilms in bone samples. Controlled columns of sediment with bone samples were used to simulate burial and subsequent groundwater flow. Sediments used in this study include clay-, silt-, and sand-sized particles modeled after various fluvial facies commonly associated with fossil vertebrates. Extant limb bone samples obtained from Gallus gallus domesticus (Domestic Chicken) buried in clay-rich sediment exhibit heavy biofilm infiltration, while bones buried in sands and silts exhibit moderate levels. Crushed bones exhibit significantly lower biofilm infiltration than whole bone samples. Strong interactions between biostratinomic alteration and sediment size are also identified with respect to biofilm development. Sediments modeling crevasse splay deposits exhibit considerable variability; whole-bone crevasse splay samples exhibit higher frequencies of high-level biofilm infiltration, and crushed-bone samples in modeled crevasse splay deposits display relatively high frequencies of low-level biofilm infiltration. These results suggest that sediment size, depositional setting, and biostratinomic condition play key roles in biofilm infiltration in vertebrate remains, and may influence soft tissue preservation in fossil vertebrates.

Linking the Modern Distribution of Biogenic Proxies in High Arctic Greenland Shelf Sediments to Sea Ice, Primary Production, and Arctic-Atlantic Inflow

NASA Astrophysics Data System (ADS)

Limoges, Audrey; Ribeiro, Sofia; Weckström, Kaarina; Heikkilä, Maija; Zamelczyk, Katarzyna; Andersen, Thorbjørn J.; Tallberg, Petra; Massé, Guillaume; Rysgaard, Søren; Nørgaard-Pedersen, Niels; Seidenkrantz, Marit-Solveig

2018-03-01

The eastern north coast of Greenland is considered to be highly sensitive to the ongoing Arctic warming, but there is a general lack of data on modern conditions and in particular on the modern distribution of climate and environmental proxies to provide a baseline and context for studies on past variability. Here we present a detailed investigation of 11 biogenic proxies preserved in surface sediments from the remote High Arctic Wandel Sea shelf, the entrance to the Independence, Hagen, and Danmark fjords. The composition of organic matter (organic carbon, C:N ratios, δ13C, δ15N, biogenic silica, and IP25) and microfossil assemblages revealed an overall low primary production dominated by benthic diatoms, especially at the shallow sites. While the benthic and planktic foraminiferal assemblages underline the intrusion of chilled Atlantic waters into the deeper parts of the study area, the distribution of organic-walled dinoflagellate cysts is controlled by the local bathymetry and sea ice conditions. The distribution of the dinoflagellate cyst Polarella glacialis matches that of seasonal sea ice and the specific biomarker IP25, highlighting the potential of this species for paleo sea ice studies. The information inferred from our multiproxy study has important implications for the interpretation of the biogenic-proxy signal preserved in sediments from circum-Arctic fjords and shelf regions and can serve as a baseline for future studies. This is the first study of its kind in this area.

Factors Regulating the Accumulation and Spatial Distribution of the Emerging Contaminant Triclosan in the Sediments of an Urbanized Estuary: Greenwich Bay, Rhode Island, USA

EPA Science Inventory

Increase in the use of personal care products (PCPs) has resulted in the release and accumulation of a diverse assemblage of emerging chemicals in the environment. Triclosan (TCS) is an antimicrobial compound being increasingly used in PCPs over the last 40 years, and as a resul...

Soft-sediment deformation structures in the late Miocene Şelmo Formation around Adıyaman area, Southeastern Turkey

NASA Astrophysics Data System (ADS)

Koç Taşgın, Calibe; Orhan, Hükmü; Türkmen, İbrahim; Aksoy, Ercan

2011-04-01

The Şelmo Formation was deposited in the basins associated with the Southeastern Anatolian Thrust Belt and East Anatolian Fault Zone in SE Turkey. These structures developed as a result of compressional stresses created by the movement of the Arabian plate to the north and the Eurasian plate to the west from early Miocene to late Pliocene. The outcrops of the Şelmo Formation in the Adýyaman area (SE Turkey) comprise braided river deposits (lower alluvial unit) at the base, lacustrine and deltaic deposits in the middle (lacustrine unit) and low sinuousity river and alluvial deposits at the top (upper alluvial unit). Soft-sediment deformation structures were developed in sandstone, siltstone and marl of the deltaic and lacustrine unit of the Şelmo Formation. These are slumps, recumbent folds, load casts, ball-and-pillow structures, flame structures, neptunian dykes, chaotically associated structures and synsedimentary faults. The tectonic setting of the basin, the lateral extent of the soft-sediment deformation structures over tens of kilometers, their similarities to deformation structures interpreted as being induced seismically in other regions worldwide or in a laboratory setting, and being confined by undeformed layers suggest that the main trigger system was related to seismic activity in the area.

Soft-Sediment Deformation Structures Interpreted as Seismites in the Kolankaya Formation, Denizli Basin (SW Turkey)

PubMed Central

Topal, Savaş; Özkul, Mehmet

2014-01-01

The NW-trending Denizli basin of the SW Turkey is one of the neotectonic grabens in the Aegean extensional province. It is bounded by normal faults on both southern and northern margins. The basin is filled by Neogene and Quaternary terrestrial deposits. Late Miocene- Late Pliocene aged Kolankaya formation crops out along the NW trending Karakova uplift in the Denizli basin. It is a typical fluviolacustrine succession that thickens and coarsens upward, comprising poorly consolidated sand, gravelly sand, siltstone and marl. Various soft-sediment deformation structures occur in the formation, especially in fine- to medium grained sands, silts and marls: load structures, flame structures, clastic dikes (sand and gravely-sand dike), disturbed layers, laminated convolute beds, slumps and synsedimentary faulting. The deformation mechanism and driving force for the soft-sediment deformation are related essentially to gravitational instability, dewatering, liquefaction-liquidization, and brittle deformation. Field data and the wide lateral extent of the structures as well as regional geological data show that most of the deformation is related to seismicity and the structures are interpreted as seismites. The existence of seismites in the Kolankaya Formation is evidence for continuing tectonic activity in the study area during the Neogene and is consistent with the occurrence of the paleoearthquakes of magnitude >5. PMID:25152909

Spawning sockeye salmon fossils in Pleistocene lake beds of Skokomish Valley, Washington

NASA Astrophysics Data System (ADS)

Smith, Gerald R.; Montgomery, David R.; Peterson, N. Phil; Crowley, Bruce

2007-09-01

An assemblage of fossil sockeye salmon was discovered in Pleistocene lake sediments along the South Fork Skokomish River, Olympic Peninsula, Washington. The fossils were abundant near the head of a former glacial lake at 115 m elevation. Large adult salmon are concentrated in a sequence of death assemblages that include individuals with enlarged breeding teeth and worn caudal fins indicating migration, nest digging, and spawning prior to death. The specimens were 4 yr old and 45-70 cm in total length, similar in size to modern sockeye salmon, not landlocked kokanee. The fossils possess most of the characteristics of sockeye salmon, Oncorhynchus nerka, but with several minor traits suggestive of pink salmon, O. gorbuscha. This suggests the degree of divergence of these species at about 1 million yr ago, when geological evidence indicates the salmon were deposited at the head of a proglacial lake impounded by the Salmon Springs advance of the Puget lobe ice sheet. Surficial geology and topography record a complicated history of glacial damming and river diversion that implies incision of the modern gorge of the South Fork Skokomish River after deposition of the fossil-bearing sediments.

Effect of nutrient pollution on dinoflagellate cyst assemblages ...

EPA Pesticide Factsheets

We analyzed surface sediments from 23 northeast USA estuaries, from Maine to Delaware, and nine estuaries from Prince Edward Island (PEI, Canada), to determine how dinoflagellate cyst assemblages varied with nutrient loading. Overall the abundance of cysts of heterotrophic dinoflagellates correlates with modeled nitrogen loading, but there were also regional signals. On PEI cysts of Gymnodinium microreticulatum characterized estuaries with high nitrogen loading while the sediments of eutrophic Boston Harbor were characterized by high abundances of Spiniferites spp. In Delaware Bay and the Delaware Inland Bays Polysphaeridium zoharyi correlated with higher temperatures and nutrient loading. This is the first study to document the dinoflagellate cyst eutrophication signal at such a large geographic scale in estuaries, thus confirming their value as indicators of water quality change and anthropogenic impact. Estuarine and coastal waters are important resources for US and Canadian citizens. This paper summarizes the use of biological indicators that provide information on the eutrophication status and impacts for estuaries along the NW Atlantic coast. These relatively new biological indicators, dinoflagellate cysts, have the potential to provide environmental managers information on recent and historical environmental conditions in estuaries. Together with information on drivers and pressures, dinoflagellate cysts can be used to develop driver-pressure-state-imp

Delta-associated molluscan life and death assemblages in the northern Adriatic Sea: Implications for paleoecology, regional diversity and conservation.

PubMed

Weber, Kristina; Zuschin, Martin

2013-01-15

Life-death (LD) studies of shelly macrofauna are important to evaluate how well a fossil assemblage can reflect the original living community, but can also serve as a proxy for recent ecological shifts in marine habitats and in practice this has to be distinguished using taphonomic preservation pattern and estimates of time-averaging. It remains to be rigorously evaluated, however, how to distinguish between sources of LD disagreement. In addition, death assemblages (DAs) also preserve important information on regional diversity which is not available from single censuses of the life assemblages (LAs). The northern Adriatic Sea is an ecosystem under anthropogenic pressure, and we studied the distribution and abundance of living and dead bivalve and gastropod species in the physically stressful environments (tidal flat and shallow sublittoral soft bottoms) associated with the delta of the Isonzo River (Gulf of Trieste). Specifically we evaluated the fidelity of richness, evenness, abundance, habitat discrimination and beta diversity. A total of 10,740 molluscs from fifteen tidal flat and fourteen sublittoral sites were analyzed for species composition and distribution of living and dead molluscs. Of 78 recorded species, only eleven were numerically abundant. There were many more dead than living individuals and rarefied species richness in the DA was higher at all spatial scales, but the differences are lower in habitats and in the region than at individual stations. Evenness was always higher in death assemblages, and probably due to temporally more variable LAs the differences are stronger in the sublittoral habitats. Distinct assemblages characterized intertidal and sublittoral habitats, and the distribution and abundance of empty shells generally corresponded to that of the living species. Death assemblages have lower beta diversity than life assemblages, but empty shells capture compositional differences between habitats to a higher degree than living shells. More samples would be necessary to account for the diversity of living molluscs in the study area, which is, however, well recorded in the death assemblages. There is no indication of a major environmental change over the last decades in this area, but due to the long history of anthropogenic pressure here, such a potential impact might be preserved in historical layers of the deeper sedimentary record.

Quantifying exchange between groundwater and surface water in rarely measured organic sediments

NASA Astrophysics Data System (ADS)

Rosenberry, D. O.; Cavas, M.; Keith, D.; Gefell, M. J.; Jones, P. M.

2016-12-01

Transfer of water and chemicals between poorly competent organic sediments and surface water in low-energy riverine and lentic settings depends on several factors, including rate and direction of flow, redox state, number and type of benthic invertebrates, and chemical gradients at and near the sediment-water interface. In spite of their commonly large areal extent, direct measurements of flow in soft, organic sediments are rarely made and little is known about flux direction, rate, or heterogeneity. Commonly used monitoring wells are difficult to install and suffer from slow response to changing hydraulic head due to the low permeability of these sediments. Seepage meters can directly quantify seepage flux if several challenges can be overcome. Meters are difficult to install and operate where water is deep, visibility is poor, and the position of the sediment-water interface is not readily apparent. Soft, easily eroded sediment can be displaced during meter installation, creating bypass flow beneath the bottom of the seepage cylinder. Poorly competent sediments often cannot support the weight of the meters; they slowly sink into the bed and displace water inside the seepage cylinder, which leads to the interpretation of large upward flow. Decaying organic material within the sediment generates gas that can displace water and corrupt seepage-meter measurements. Several inexpensive modifications to a standard seepage meter, as well as precautions during installation and operation, can minimize these sources of error. Underwater video cameras can be mounted to the meter to remotely observe sediment disturbance during sensor installation and monitor the stability of the meter insertion depth during the period of deployment. Anchor rods can be driven a meter or more into the sediment until refusal, firmly anchoring the seepage meter at a constant sediment insertion depth. Data collected from modified seepage meters installed in Minnesota and New York demonstrate the importance of quantifying flows in these challenging settings where biogeochemistry is complex and seepage rates commonly have been assumed to be insignificantly small.

Lower Miocene plant assemblage with coastal-marsh herbaceous monocots from the Vienna Basin (Slovakia)

NASA Astrophysics Data System (ADS)

Kvaček, Zlatko; Teodoridis, Vasilis; Kováčová, Marianna; Schlögl, Ján; Sitár, Viliam

2014-06-01

A new plant assemblage of Cerová-Lieskové from Lower Miocene (Karpatian) deposits in the Vienna Basin (western Slovakia) is preserved in a relatively deep, upper-slope marine environment. Depositional conditions with high sedimentation rates allowed exceptional preservation of plant remains. The plant assemblage consists of (1) conifers represented by foliage of Pinus hepios and Tetraclinis salicornioides, a seed cone of Pinus cf. ornata, and by pollen of the Cupressaceae, Pinaceae, Pinus sp. and Cathaya sp., and (2) angiosperms represented by Cinnamomum polymorphum, Platanus neptuni, Potamogeton sp. and lauroid foliage, by pollen of Liquidambar sp., Engelhardia sp. and Craigia sp., and in particular by infructescences (so far interpreted as belonging to cereal ears). We validate genus and species assignments of the infructescences: they belong to Palaeotriticum Sitár, including P. mockii Sitár and P. carpaticum Sitár, and probably represent herbaceous monocots that inhabited coastal marshes, similar to the living grass Spartina. Similar infructescences occur in the Lower and Middle Miocene deposits of the Carpathian Foredeep (Slup in Moravia), Tunjice Hills (Žale in Slovenia), and probably also in the Swiss Molasse (Lausanne). This plant assemblage demonstrates that the paleovegetation was represented by evergreen woodland with pines and grasses in undergrowth, similar to vegetation inhabiting coastal brackish marshes today. It also indicates subtropical climatic conditions in the Vienna Basin (central Paratethys), similar to those implied by other coeval plant assemblages from Central Europe

Intensities of drilling predation of molluscan assemblages in intertidal and subtidal soft substrates in the Persian (Arabian) Gulf

NASA Astrophysics Data System (ADS)

Handler, Sabine M.; Albano, Paolo G.; Bentlage, Rudolf; Drummond, Hannah; García-Ramos, Diego A.; Zuschin, Martin

2016-04-01

Intensities of drilling predation of molluscan assemblages in intertidal and subtidal soft substrates in the Persian (Arabian) Gulf Sabine Maria Handler1, Paolo G. Albano1, Rudolf Bentlage2, Hannah Drummond2, D.A. García-Ramos1, Martin Zuschin1 1 Department of Paleontology, University of Vienna, Austria 2 St. Lawrence University, Canton, New York 13617, USA Trace fossils left by predators in the skeleton of their prey are arguably one of the most powerful sources of direct data on predator-prey interactions available in the fossil record. Drill holes, especially those attributed to naticid and muricid gastropods, are unambiguous marks of predation and allow discriminating between successful and unsuccessful predation attempts (complete and incomplete holes, respectively). Latitude and water depth influence drilling frequency. We inspected death assemblages of an intertidal flat and of two subtidal (water depth between 6 and 20 m) sandy sites in the Persian (Arabian) Gulf, off the coast of the United Arab Emirates, to determine the patterns of predation on shelled molluscs along the depth gradient. The study is based on ~7,000 and ~60,000 shells from the intertidal and subtidal, respectively. Drilling Frequency (DF, the number of drilled individuals), Incomplete Drilling Frequency (IDF, number of incomplete drill holes), and Prey Effectiveness (ratio between the number of incomplete drill holes and the total number of drilling attempts) were used as metrics of drilling intensity. We observed major differences between the intertidal and subtidal study areas. Drilling frequencies were generally remarkably low and intertidal flats showed a much lower drilling frequency than the subtidal (1.4% and 6.7%, respectively). In the subtidal, we observed significant differences of drilling intensity among bivalve species and between the two sites. However, predation metrics did not correlate with environmental factors such as substrate type and depth, nor with species life habits such as infaunal vs. epifaunal and death assemblage indices such as diversity, abundance and evenness. The abundance of naticid and muricid predators in the living and death assemblage also did not correlate with predation intensities, with the single exception of muricid abundance in the LA at one of the two subtidal sites. The study shows that bivalve predation intensity in the studied area is highly variable among prey species and depth zones (intertidal vs subtidal), but poorly dependant upon other environmental and community structure factors. Results for gastropods are currently being analysed.

Record of Subducting Topography revealed in 3D Seismic Imaging of Pleistocene unconformities, offshore Southern Costa Rica

NASA Astrophysics Data System (ADS)

Edwards, J. H.; Kluesner, J. W.; Silver, E. A.

2015-12-01

3D seismic reflection data (CRISP) collected across the southern Costa Rica forearc reveals broad, survey-wide erosional events in the upper ~1 km of slope sediments in the mid-slope to outer shelf. The upper 0-280 m of continuous, weakly deformed sediments, designated by IODP Expedition 344 as structural domain I, is bounded by a major erosional event, (CRISP-U1, dated near 1 Ma), suggesting wave-plain erosion from the present shelf break out to 25 km seaward, to a present-day water depth of 900-1300 m. The eastern toe of its surface is characterized by a large drainage system, likely including submarine channels that eroded to depths >1500 m below present-day water depth. CRISP-U1 is variably uplifted by a series of fault propagation folds and cut by an intersecting array of normal faults. Another, major erosional event, (CRISP-M1, approximately 2 Ma) extended from the outer shelf to the mid slope and removed 500-1000 m of material. Overlying CRISP-M1 is up to 1 km of sediments that are more deformed by fault propagation folds, back thrusts, and intersecting arrays of normal faults. Unconformities with smaller areal extent are variably found in these overlying sediments across the mid-slope to outer shelf, at present-day water depths >220 m. Below CRISP-M1, sediments are more densely deformed and also contain major unconformities that extend survey-wide. Both unconformities, CRISP-U1 and CRISP-M1, are encountered in well U1413 and are demarcated by major benthic foraminifera assemblage changes at 149 mbsf and ~504 mbsf (Harris et al., 2013, Proceeding of the IODP, Volume 344).CRISP-M1 is likely correlative to the major sediment facies and benthic foraminifera assemblage change found in U1379 at ~880 mbsf (Vannuchi et al., 2013). The unconformities and intersecting array of normal faults may demarcate the passing of topography on the downgoing Cocos plate, episodically lifting and then subsiding the Costa Rica margin, with amplitudes up to about 1 km.

Macrofaunal communities associated with chemosynthetic habitats from the U.S. Atlantic margin: A comparison among depth and habitat types

USGS Publications Warehouse

Bourque, Jill R.; Robertson, Craig M.; Brooke, Sandra; Demopoulos, Amanda W.J.

2016-01-01

Hydrocarbon seeps support distinct benthic communities capable of tolerating extreme environmental conditions and utilizing reduced chemical compounds for nutrition. In recent years, several locations of methane seepage have been mapped along the U.S. Atlantic continental slope. In 2012 and 2013, two newly discovered seeps were investigated in this region: a shallow site near Baltimore Canyon (BCS, 366–412 m) and a deep site near Norfolk Canyon (NCS, 1467–1602 m), with both sites containing extensive chemosynthetic mussel bed and microbial mat habitats. Sediment push cores, suction samples, and Ekman box cores were collected to quantify the abundance, diversity, and community structure of benthic macrofauna (>300 μm) in mussel beds, mats, and slope habitats at both sites. Community data from the deep site were also assessed in relation to the associated sediment environment (organic carbon and nitrogen, stable carbon and nitrogen isotopes, grain size, and depth). Infaunal assemblages and densities differed both between depths and among habitat types. Macrofaunal densities in microbial mats were four times greater than those present in mussel beds and slope sediments and were dominated by the annelid families Dorvilleidae, Capitellidae, and Tubificidae, while mussel habitats had higher proportions of crustaceans. Diversity was lower in BCS microbial mat habitats, but higher in mussel and slope sediments compared to NCS habitats. Multivariate statistical analysis revealed specific sediment properties as important for distinguishing the macrofaunal communities, including larger grain sizes present within NCS microbial mat habitats and depleted stable carbon isotopes (δ13C) in sediments present at mussel beds. These results suggest that habitat differences in the quality and source of organic matter are driving the observed patterns in the infaunal assemblages, including high β diversity and high variability in the macrofaunal community composition. This study is the first investigation of seep infauna along the U.S. Atlantic slope north of the Blake Ridge Diapir and provides a baseline for future regional comparisons to other seep habitats along the Atlantic margin.

Macrofaunal communities associated with chemosynthetic habitats from the U.S. Atlantic margin: A comparison among depth and habitat types

NASA Astrophysics Data System (ADS)

Bourque, Jill R.; Robertson, Craig M.; Brooke, Sandra; Demopoulos, Amanda W. J.

2017-03-01

Hydrocarbon seeps support distinct benthic communities capable of tolerating extreme environmental conditions and utilizing reduced chemical compounds for nutrition. In recent years, several locations of methane seepage have been mapped along the U.S. Atlantic continental slope. In 2012 and 2013, two newly discovered seeps were investigated in this region: a shallow site near Baltimore Canyon (BCS, 366-412 m) and a deep site near Norfolk Canyon (NCS, 1467-1602 m), with both sites containing extensive chemosynthetic mussel bed and microbial mat habitats. Sediment push cores, suction samples, and Ekman box cores were collected to quantify the abundance, diversity, and community structure of benthic macrofauna (>300 μm) in mussel beds, mats, and slope habitats at both sites. Community data from the deep site were also assessed in relation to the associated sediment environment (organic carbon and nitrogen, stable carbon and nitrogen isotopes, grain size, and depth). Infaunal assemblages and densities differed both between depths and among habitat types. Macrofaunal densities in microbial mats were four times greater than those present in mussel beds and slope sediments and were dominated by the annelid families Dorvilleidae, Capitellidae, and Tubificidae, while mussel habitats had higher proportions of crustaceans. Diversity was lower in BCS microbial mat habitats, but higher in mussel and slope sediments compared to NCS habitats. Multivariate statistical analysis revealed specific sediment properties as important for distinguishing the macrofaunal communities, including larger grain sizes present within NCS microbial mat habitats and depleted stable carbon isotopes (δ13C) in sediments present at mussel beds. These results suggest that habitat differences in the quality and source of organic matter are driving the observed patterns in the infaunal assemblages, including high β diversity and high variability in the macrofaunal community composition. This study is the first investigation of seep infauna along the U.S. Atlantic slope north of the Blake Ridge Diapir and provides a baseline for future regional comparisons to other seep habitats along the Atlantic margin.

Source tracing of fluvial suspended sediments by magnetic and geochemical particle characterization: example of the Canche watershed (Nord-Pas-de-Calais, France)

NASA Astrophysics Data System (ADS)

Patault, Edouard; Alary, Claire; Franke, Christine; Gauthier, Arnaud; Abriak, Nor-Edine

2016-04-01

In France, erosion by water run-off is estimated to 1.5 t ha-1yr-1 and can exceed 10 t ha-1yr-1 in large growing areas, such as the North of France (Nord-Pas-de-Calais). In this region, the Canche watershed (1294 km2) sustains heavy loss of fertile soils. The land use is mainly dominated by arable lands (80%) and in 2013, 104 kt of suspended sediment transited to the estuary. As demonstrated in literature, agricultural soil erosion leads to the gradual disappearance and depletion of fertile soil, which constitute a non-renewable resource at human time scale. Additionally, water erosion can significantly damage the aquatic habitat and can be responsible for the input of nutrients, bacteria, pesticides, heavy metals and radionuclides into surface waters. Conscious of these effects, many programs have emerged in the Nord-Pas-de-Calais to reduce erosion. This study presents a combination of environmental magnetic proxy parameters and geochemical analyses on sediments and suspended particulate matter. The aim is to develop effective tools to trace erosion by water run-off and quantify this process. In order to identify the respective sediment sources in the Canche watershed, sediment trap samples of suspended particulate matter were recovered at key positions along the Canche watershed. The preliminary results show that magnetic concentration (Mrs) shows typical values for the agricultural soils in the region, but these variations in magnetic concentrations and total irons concentrations are not always correlated, which may be explained by the iron speciation. In calculating the so-called S-ratio for each sample we can distinguish changes in magneto-mineralogy (and thus iron speciation) from magnetite-dominated assemblages in the mainstream Canche (naturel background signal) to high-coercivity-dominated assemblages in the tributaries, typical for soil erosion material rich in hematite/goethite. In combination with the element concentrations from ICP analyses, this proxy parameter may give valuable insight into the tracing of the suspended sediment sources. In perspective, the seasonal variability and the discharge in the Canche watershed have to be taken into account.

The Life of a Sponge in a Sandy Lagoon.

PubMed

Ilan, M; Abelson, A

1995-12-01

Infaunal soft-bottom invertebrates benefit from the presence of sediment, but sedimentation is potentially harmful for hard-bottom dwellers. Most sponges live on hard bottom, but on coral reefs in the Red Sea, the species Biemna ehrenbergi (Keller, 1889) is found exclusively in soft-bottom lagoons, usually in the shallowest part. This location is a sink environment, which increases the deposition of particulate organic matter. Most of the sponge body is covered by sediment, but the chimney-like siphons protrude from the sediment surface. The sponge is attached to the buried beach-rock, which reduces the risk of dislodgment during storms. Dye injected above and into the sediment revealed, for the first time, a sponge pumping interstitial water (rich with particles and nutrients) into its aquiferous system. Visual examination of plastic replicas of the aquiferous system and electron microscopical analysis of sponge tissue revealed that the transcellular ostia are mostly located on the buried surface of the sponge. The oscula, however, are located on top of the siphons; their elevated position and their ability to close combine to prevent the filtering system outflow from clogging. The transcellular ostia presumably remain open due to cellular mobility. The sponge maintains a large population of bacteriocytes, which contains bacteria of several different species. Some of these bacteria disintegrate, and may be consumed by the sponge.

Distribution of green algal mats throughout shallow soft bottoms of the Swedish Skagerrak archipelago in relation to nutrient sources and wave exposure

NASA Astrophysics Data System (ADS)

Pihl, Leif; Svenson, Anders; Moksnes, Per-Olav; Wennhage, Håkan

1999-06-01

Distribution and biomass of green algal mats were studied in marine shallow (0-1 m) soft-bottom areas on the Swedish west coast from 1994 to 1996, by combining aerial photography surveys with ground truth sampling. Filamentous green algae, dominated by species of the genera Cladophora and Enteromorpha, were generally present throughout the study area during July and August, and largely absent in late April and early May. These algae occurred at 60 to 90% of the locations investigated during the summer, and were estimated to cover between 30 and 50% of the total area of shallow soft bottoms of the Swedish Skagerrak archipelago. The distributional patterns were similar during the three years of the investigation and appeared unrelated to annual local nutrient inputs from point sources and river discharge. We postulate that the apparent lack of such a relationship is due to an altered state of nutrient dynamics throughout the archipelago. Mechanisms are likely to involve long-term, diffuse elevations in nutrient levels in coastal waters of the Skagerrak and the Kattegat over several decades leading to current eutrophic conditions, exceeding nutrient requirements for abundant filamentous algal growth. Patterns of algal abundance in our study were largely related to physical factors such as exposure to wind, waves and water exchange under conditions where nutrient loads among embayments seemed to be unlimited. Further, our results show that sediments covered by algal mats had higher carbon and nitrogen contents than unvegetated sediments. We hypothesise that sustained high nutrient loads, manifested in extensive biomass of filamentous algae during summer months, are re-mineralised via decay and sedimentation in the benthic realm. Hence, accumulated carbon and nutrients in the sediment could, in turn, constitute the basic pool for future algal mat production overlying soft bottoms in areas where tidal exchange is limited.

Holocene Millennial-scale Surface and Bottom Water Variability, Feni Drift, NE Atlantic Ocean: Foraminiferal Assemblages

NASA Astrophysics Data System (ADS)

Lassen, S. J.; Richter, T. O.; de Stigter, H. C.; van Weering, T. C. E.; de Haas, H.

A high-resolution sediment core from Feni Drift (ENAM9606, 56N 14W, 2543 m wa- ter depth) was investigated for planktonic and benthic foraminiferal assemblages dur- ing the last 12,000 years. During the Preboreal, peak abundances of T.quinqueloba indicate the passage of the Arctic front over the core site. Holocene planktonic foraminiferal assemblages indicate a gradual warming trend of surface water masses punctuated by a major cooling (8,200ky event s.l.), and possibly a slight cooling dur- ing the last 3,000 years. The interval from 10 to 5kyrs shows higher and fluctuating abundances of T.quinqueloba and G.bulloides, which suggest proximity of the subarc- tic front and enhanced spring blooms compared to the upper Holocene. Abundance peaks of N.pachyderma(s) and/or T.quinqueloba indicate a series of millennial-scale cooling events during the entire Holocene, which can be correlated to similar episodes previously described from other locations in the North Atlantic and Norwegian- Greenland Sea. Benthic foraminiferal assemblages indicate a gradual transition from seasonal, spring-bloom related food supply in the Lower Holocene (dominance of the phytodetritus species E.exigua) to possibly lower, but more sustained food supply in the Upper Holocene (dominance of C.obtusa and C.laevigata).

High marsh foraminiferal assemblages' response to intra-decadal and multi-decadal precipitation variability, between 1934 and 2010 (Minho, NW Portugal)

NASA Astrophysics Data System (ADS)

Fatela, Francisco; Moreno, João; Leorri, Eduardo; Corbett, Reide

2014-10-01

Foraminiferal assemblages of Caminha tidal marshes have been studied since 2002 revealing a peculiar dominance of brackish species, such as Haplophragmoides manilaensis, Haplophragmoides wilberti, Haplophragmoides sp., Pseudothurammina limnetis and Trochamminita salsa/irregularis in the high marshes of the Minho and the Coura lower estuaries. The assemblage composition reflects low salinity conditions, despite the short distance to the estuarine mouth (~ 4 km). However, in May 2010, the presence of salt marsh species Trochammina inflata and Jadammina macrescens became very significant, likely a result of 5 consecutive dry years and a corresponding salinity rise in sediment pore water. Correspondence analysis (CA) groups the surface samples according to their marsh zone, showing a positive correlation with the submersion time of each sampling point. The brackish and normal salinity foraminiferal species appear separated in the CA. This observation was applied to the top 10 cm of a high marsh sediment core that corresponds to the period of instrumental record of precipitation and river flow in the Minho region. We found that river flow strongly correlates with precipitation in the Lima and Minho basins. The longer precipitation record was, therefore, used to interpret the foraminiferal assemblages' variability. Three main phases were distinguished along ca. 80 years of precipitation data: 1) negative anomalies from 1934 to 1957; 2) positive anomalies from 1958 to 1983; and 3) negative anomalies from 1984 to 2010. This last dryer period exhibits the precipitation maximum and the greatest amplitude of rainfall values. High marsh foraminifera reveals a fast response to these short-term shifts; low salinity species relative abundance increases when precipitation increases over several decades, as well as in the same decade, in the years of heavy rainfall of dryer periods. High marsh foraminifera records the increase of freshwater flooding and seepage by 1) decreasing abundance and 2) increasing the dominance of low salinity species. On the other hand, low precipitation over ca. 5 years increases the assemblage productivity and the relative abundance of normal salinity species. The positive correlation found between winter precipitation and the NAO winter index indicates that the Minho region is a part of the North Atlantic climate dynamics and demonstrates that the foraminiferal record from Caminha high marsh may be applied in high-resolution studies of SW Europe climate evolution.

Covariation of viral parameters with bacterial assemblage richness and diversity in the water column and sediments

NASA Astrophysics Data System (ADS)

Hewson, Ian; Fuhrman, Jed A.

2007-05-01

Viruses are hypothesized to maintain diversity in microbial assemblages by regulating the abundance of dominant competitors and thereby allowing less-dominant competitors to persist in assemblages; however, there have been few empirical data sets to support this idea. In this study, we examined the relationship between the ratio of viral abundance to bacterial abundance, viral production, and the relative richness and diversity of bacterial assemblage fingerprints, in samples taken from geographically widespread locations (North Pacific gyre, the Amazon River plume and adjacent North Atlantic gyre, Gulf of Mexico, Southern California Bight and Arafura—Coral Seas) which are oligo- to mesotrophic. Bacterial assemblage richness and diversity as measured by automated rRNA intergenic spacer (ARISA) fingerprinting were significantly and positively correlated with the ratio of virus abundance to bacteria abundance (VBR) and to the rate of virus production only in the oligotrophic North Pacific gyre. ARISA fingerprint richness/diversity were not significantly correlated to viral parameters when assessed across all samples in surface waters, suggesting there is not a singular global quantitative relationship between viral pressure and host diversity within well evolved host/virus systems in different geographic locations in plankton. In sediments off Southern California, viral parameters significantly and negatively correlated with ARISA diversity, suggesting strong viral interactions in this habitat. To examine covariation of viral parameters and the relative abundance and diversity of rarer bacterial taxa (i.e., less-dominant competitor), the richness and diversity of diazotroph communities was measured using terminal restriction fragment length polymorphism (TRFLP) of a portion ( nifH) of the nitrogenase gene. The richness and diversity of diazotrophic communities were significantly and negatively correlated with viral parameters across all locations. Since diazotrophs include many opportunistic taxa (e.g. Vibrionaceae), and because these bacteria may be more susceptible to viral attack due to enhanced resource uptake abilities and potentially rapid localized growth, it is possible that this negative effect was due to enhanced viral lysis. Consequently, virus infection may have positive effects upon bacterioplankton diversity in the oligotrophic ocean, by regulating the abundance of dominant competitors, and allowing rarer taxa to coexist; however, some rarer taxa (such as diazotrophs) may be more susceptible to viral attack due to opportunistic lifestyles.

The structure of soft-bottom benthic communities in the vicinity of the Texas Flower Garden Banks, Gulf of Mexico

NASA Astrophysics Data System (ADS)

Yingst, Josephine Y.; Rhoads, Donald C.

1985-05-01

Biological and sedimentological samples were obtained in June 1980 from box cores taken in 100-200 m of water on sandy-mud sediments near the East and West Flower Garden Bank reefs, on the Texas-Louisiana Continental Shelf. The objective was to obtain baseline information about sedimentary parameters and organisms adjacent to the FGB environments in order to allow inferences to be made about potential effects of physical disturbance of the seafloor on the resident benthos. Most infaunal organisms are found in the upper 3-5 cm of the bottom. Permanent meiofauna dominate in both numbers and biomass. X-radiographs of sediment fabrics show all stations to be reworked by head-down deposit-feeders or errant bioturbators. Taxa responsible for this bioturbation were not quantitatively sampled. Macrofaunal densities range from 3000 to 25000 m -2 and total meiofauna from 221 to 892 × (10 cm) -2. Nematodes dominate followed in equal abundance by foraminiferans, polychaetes, and copepods. Seventy-five percent of the total sediment ATP in the top 3 cm is contributed by meiofauna. These benthic assemblages are hypothesized to represent a mixture of pioneering and high-order successional stages. Bacterial abundances are positively correlated with organic content and inversely correlated with macro- and meiofaunal densities. This inverse relationship may reflect consumer cropping intensities. Both microbial ATP and bacterial biomass are lower than reported for the Georgia Bight Shelf, Cape Blanc, West African Shelf, western coast of Norway, and Long Island Sound. Bacterial counts are lower than those recorded for the East China Sea and the Amazon River shelf. Moderate to low standing stocks of benthos, dominated by meiofaunal-sized taxa, further suggest that this area of the Gulf of Mexico is a relatively oligotrophic system for infaunal benthic consumers. Higher order successional stages are, in general, adversely affected to a greater extent than pioneering stages by physical disturbance. In the Texas-Louisiana shelf region, dilution of an already food limited system by inert barium sulphate would be expected to result in even lower standing stocks of benthic infaunal invertebrates.

Long-Term Field Study Reveals Subtle Effects of the Invasive Alga Sargassum muticum upon the Epibiota of Zostera marina.

PubMed

DeAmicis, Stacey; Foggo, Andrew

2015-01-01

Invasive species can alter coastal ecosystems both directly, e.g. through competition for substratum and nutrients, and indirectly. Indirect effects may be mediated by creation of dissimilar or inimical habitats, changes in predator and/or prey assemblages, alterations in associated biota, and perturbations of water movement and thermal regimes. Previous studies have shown that invasive algae can modify native habitat architecture, disrupt intricately linked food webs and alter epibiotic assemblages. In the UK, the seagrass Zostera marina supports a diverse epibiotic assemblage, influencing key factors such as sediment dynamics, depositional regime and trophic linkages. Increasing encroachment of the invasive alga Sargassum muticum into seagrass meadows changes the physical and chemical characteristics of the local environment and creates the potential for changes in the epibionts associated with the seagrass blades, threatening the integrity of the seagrass ecosystem. We investigated the effects of S. muticum invasion upon the epibiota of Z. marina in a drowned river valley in SW England seasonally from spring to autumn over four years in an in-situ manipulative experiment, comparing permanent quadrats with and without artificially introduced S. muticum. Epibiota were weighed, identified to the most detailed operational taxonomic unit (OTU) possible, and unitary organisms were enumerated. Multivariate PERMANOVA+ analysis revealed significant differences in epibiont assemblages between Sargassum treatments. Linear mixed effects models indicated that differences in epibiota assemblage composition were not reflected as significant differences in mean biomass per sample, or number of epibiont OTUs per sample. We conclude that S. muticum invasion into Z. marina meadows may significantly alter the species composition and abundance distribution of epibiotic assemblages found on the blades of the seagrass. Thus S. muticum invasion could have more wide-reaching effects on processes within coastal ecosystems than predicted purely by direct effects.

A late Holocene pollen record from proglacial Oblong Tarn, Mount Kenya

PubMed Central

Gajewski, Konrad; Marchant, Rob; Rosqvist, Gunhild

2017-01-01

High-elevation ecosystems, such as those on Mount Kenya are undergoing significant changes, with accelerated glacial ice losses over the twentieth century creating new space for alpine plants to establish. These ecosystems respond rapidly to climatic variability and within decades of glacial retreat, Afroalpine pioneering taxa stabilize barren land and facilitate soil development, promoting complex patches of alpine vegetation. Periglacial lake sediment records can be used to examine centennial and millennial scale variations in alpine and montane vegetation compositions. Here we present a 5300-year composite pollen record from an alpine tarn (4370 m asl) in the Hausberg Valley of Mount Kenya. Overall, the record shows little apparent variation in the pollen assemblage through time with abundant montane forest taxa derived and transported from mid elevations, notably high abundances of aerophilous Podocarpus pollen. Afroalpine taxa included Alchemilla, Helichrysum and Dendrosenecio-type, reflecting local vegetation cover. Pollen from the ericaceous zone was present throughout the record and Poaceae percentages were high, similar to other high elevation pollen records from eastern Africa. The Oblong Tarn record pollen assemblage composition and abundances of Podocarpus and Poaceae since the late Holocene (~4000 cal yr BP-present) are similar to pollen records from mid-to-high elevation sites of nearby high mountains such as Mount Elgon and Kilimanjaro. These results suggest a significant amount of uphill pollen transport with only minor apparent variation in local taxa. Slight decreasing trends in alpine and ericaceous taxonomic groups show a long-term response to global late Holocene cooling and a step decrease in rate of change estimated from the pollen assemblages at 3100 cal yr BP in response to regional hydroclimatic variability. Changes in the principal component axis scores of the pollen assemblage were coherent with an independent mid-elevation temperature reconstruction, which supported the strong influence of uphill pollen transport from montane forest vegetation and association between temperatures and montane vegetation dynamics. Pollen accumulation rates showed some variability related to minerogenic sediment input to the lake. The Oblong Tarn pollen record provides an indication of long term vegetation change atop Mount Kenya showing some decreases in local alpine and ericaceous taxa from 5300–3100 cal yr BP and minor centennial-scale variability of montane taxa from mid elevation forests. The record highlights potentials, challenges and opportunities for the use of proglacial lacustrine sediment to examine vegetation change on prominent mountain massifs. PMID:28926642

Optical and thermoluminescence dating of Middle Stone Age and Kintampo bearing sediments at Birimi, a multi-component archaeological site in Ghana

NASA Astrophysics Data System (ADS)

Quickert, Nicole A.; Godfrey-Smith, Dorothy I.; Casey, Joanna L.

2003-05-01

We report the first luminescence ages for the archeological and geological sediments forming the substrate of the Birimi archaeological site in the Northern Region of Ghana. The site's significance rests on the fact that it contains a rich collection of artifact assemblages representative of three distinct cultures, and that, on the basis of artifact typology, the earliest assemblage is diagnostic of the Middle Stone Age (MSA) . In situ occurrences of MSA artifacts are found at over 1 m below today's surface. They are overlain by a ceramic-rich complex of a sedentary or semi-sendentary Later Stone Age culture known as the Kintampo. The western half of the site is dominated by the industrial remains of Iron Age smelting activity. Elemental, mineralogical, and sedimentological analysis of the cultural and sub-cultural sedimentary horizons at the site revealed at least three distinct lithostratigraphic units. The quartz sediments are derived from the sandstone of the Gambaga escarpment, mass wasted and accreted fluvially at a rate of 3.2 cm/ka, forming a wide terrace at Birimi. Silts and finer fractions derive from windblown dust, likely from White Volta River and granitic sources to the north. Soil forming processes and wide fluctuations in moisture have progressively reduced the sediments at depth to the resistant quartz and kaolinite, with rich iron oxide coatings, and created two ironstone horizons composed of goethite-cemented quartz nodules. Multiple aliquot green-light stimulated optical ages for 125-150 μm quartz grains yielded ages of 23.6±2.9 and 40.8±11.8 ka for the MSA-bearing sediments, and 58.4±15.3 ka for the base of the terrace. Radiocarbon ages on charcoal from Kintampo-bearing units are 3.36-3.83 ka cal BP, and are supported by thermoluminescence (TL) ages on pottery sherds and burnt house daub fragments of this cultural complex. A 0.4 ka age on sediment from the site's surface confirms that the quartz zeroes well when exposed to natural light. Sediments bearing the Kintampo artifacts, however, yielded ages of 7.8-16.9 ka. These ages were obtained on sediments from large pits, some over 50 cm deep, and they deviate only slightly from the ages expected for naturally aggraded sediments at these depths. We conclude, therefore, that extensive digging of pits by the Kintampo dwellers was followed by rapid refilling, and that the bulk mobilization of the matrix did not permit the sedimentary quartz grains to experience any appreciable zeroing at that time.

Linking microbial assemblages to paleoenvironmental conditions from the Holocene and Last Glacial Maximum times in Laguna Potrok Aike sediments, Argentina

NASA Astrophysics Data System (ADS)

Vuillemin, Aurele; Ariztegui, Daniel; Leavitt, Peter R.; Bunting, Lynda

2014-05-01

Laguna Potrok Aike is a closed basin located in the southern hemisphere's mid-latitudes (52°S) where paleoenvironmental conditions were recorded as temporal sedimentary sequences resulting from variations in the regional hydrological regime and geology of the catchment. The interpretation of the limnogeological multiproxy record developed during the ICDP-PASADO project allowed the identification of contrasting time windows associated with the fluctuations of Southern Westerly Winds. In the framework of this project, a 100-m-long core was also dedicated to a detailed geomicrobiological study which aimed at a thorough investigation of the lacustrine subsurface biosphere. Indeed, aquatic sediments do not only record past climatic conditions, but also provide a wide range of ecological niches for microbes. In this context, the influence of environmental features upon microbial development and survival remained still unexplored for the deep lacustrine realm. Therefore, we investigated living microbes throughout the sedimentary sequence using in situ ATP assays and DAPI cell count. These results, compiled with pore water analysis, SEM microscopy of authigenic concretions and methane and fatty acid biogeochemistry, provided evidence for a sustained microbial activity in deep sediments and pinpointed the substantial role of microbial processes in modifying initial organic and mineral fractions. Finally, because the genetic material associated with microorganisms can be preserved in sediments over millennia, we extracted environmental DNA from Laguna Potrok Aike sediments and established 16S rRNA bacterial and archaeal clone libraries to better define the use of DNA-based techniques in reconstructing past environments. We focused on two sedimentary horizons both displaying in situ microbial activity, respectively corresponding to the Holocene and Last Glacial Maximum periods. Sequences recovered from the productive Holocene record revealed a microbial community adapted to subsaline conditions producing methane with a high potential of organic matter degradation. In contrast, sediments rich in volcanic detritus from the Last Glacial Maximum showed a substantial presence of lithotrophic microorganisms and sulphate-reducing bacteria mediating authigenic minerals. Together, these features suggested that microbial communities developed in response to climatic control of lake and catchment productivity at the time of sediment deposition. Prevailing climatic conditions exerted a hierarchical control on the microbial composition of lake sediments by regulating the influx of organic and inorganic material to the lake basin, which in turn determined water column chemistry, production and sedimentation of particulate material, resulting in the different niches sheltering these microbial assemblages. Moreover, it demonstrated that environmental DNA can constitute sedimentary archives of phylogenetic diversity and diagenetic processes over tens of millennia.

Sediment Carbon Accumulation in Southern Latitude Saltmarsh Communities of Tasmania, Australia.

PubMed

Ellison, Joanna C; Beasy, Kim M

2018-05-02

Carbon sequestration values of wetlands are greatest in their sediments. Northern hemisphere research dominates the earlier saltmarsh carbon sequestration literature, recently augmented by analyses across mainland Australia where species assemblages, catchment histories and environmental settings differ. No previous assessment has been made for Tasmania. Carbon stores and accumulation rates in saltmarsh sediments of the Rubicon estuary, Tasmania, were investigated. Carbon was determined from sediment cores by Elemental Analyser, combined with analysis of organic content and bulk density. Carbon accumulation was determined using short-term and long-term sediment accretion indicators. Results showed carbon densities to be lower than global averages, with variation found between carbon stores of native and introduced species zones. Cores from introduced Spartina anglica indicated a trend of higher sediment carbon percentages relative to cores from native saltmarsh Juncus kraussii and Sarcocornia quinqueflora , and in finer grain sizes. Sediment carbon stock of 30 cm depths was 49.5 Mg C ha −1 for native saltmarsh and 55.5 Mg C ha −1 for Spartina . Carbon percentages were low owing to high catchment inorganic sediment yields, however carbon accumulation rates were similar to global averages, particularly under Spartina . Covering 85% of saltmarsh area in the estuary, Spartina contributes the majority to carbon stores, potentially indicating a previously unrecognized value for this invasive species in Australia.

Local variation of inundation, sedimentary characteristics, and mineral assemblages of the 2011 Tohoku-oki tsunami on the Misawa coast, Aomori, Japan

NASA Astrophysics Data System (ADS)

Nakamura, Yugo; Nishimura, Yuichi; Putra, Purna Sulastya

2012-12-01

The 2011 Tohoku-oki tsunami caused severe damage to the coastal regions of eastern Japan and left a sediment veneer over affected areas. We discuss differences in depositional characteristics of the 2011 Tohoku-oki tsunami from the viewpoint of the sediment source, coastal topography and flow height. The study area on the Misawa coast, northern Tohoku, includes a 20 km long coastline with sandy beaches, coastal dunes and a gently sloping lowland. This landscape assemblage provides an opportunity to examine the effects of topography on the characteristics of the tsunami deposit. During field surveys conducted from April 10 to May 2, 2011, we described the thickness, facies, and structure of the tsunami deposit. We also collected sand samples at approximately 20 m intervals along 13 shore-perpendicular transects extending up to 550 m inland, for grain size and mineral assemblage analysis. The tsunami flow height was estimated by measuring the elevation of debris found in trees, broken tree limbs, or water marks on buildings. The nature of the coastal lowland affected the flow height and inundation distance. In the southern part of the study area, where there is a narrow, 100 m wide low-lying coastal strip, the run-up height reached 10 m on the landward terrace slopes. To the north, the maximum inundation reached 550 m with a run-up height of 3.2 m on the wider, low-lying coastal topography. The average flow height was 4-5 m. The tsunami eroded coastal dunes and formed small scarps along the coast. Immediately landward of the coastal dunes the tsunami deposit was more than 20 cm thick, but thinned markedly inland from this point. Close to the dunes the deposit was composed largely of medium sand (1-2 Φ) with planar and parallel bedding, but with no apparent upward fining or coarsening. The grain size was similar to that of the coastal dune and we infer that the dunes were the local source material for the tsunami deposit at this point. The mineral assemblage of the tsunami deposit was dominated by orthopyroxene and clinopyroxene and was also similar to the dune and beach sand. At sites more than half the inundation distance inland, the thinner tsunami deposit consisted mainly of fine sand (2.375 Φ) with some upward fining. The difference in grain size and sedimentary characteristics was probably caused by differences in sediment transportation and depositional processes. We infer that the well-sorted, finer sediments were deposited out of suspension, whereas the relatively coarse sands were laid down from traction flows. The depositional characteristics of the 2011 Tohoku-oki tsunami deposit appeared to have been affected mainly by the coastal topography and the extent of erosion at any one point, as opposed to flow height.

Geochemistry of the furnace magnetite bed, Franklin, New Jersey, and the relationship between stratiform iron oxide ores and stratiform zinc oxide-silicate ores in the New Jersey highlands

USGS Publications Warehouse

Johnson, C.A.; Skinner, B.J.

2003-01-01

The New Jersey Highlands terrace, which is an exposure of the Middle Proterozoic Grenville orogenic belt located in northeastern United States, contains stratiform zinc oxide-silicate deposits at Franklin and Sterling Hill and numerous massive magnetite deposits. The origins of the zinc and magnetite deposits have rarely been considered together, but a genetic link is suggested by the occurrence of the Furnace magnetite bed and small magnetite lenses immediately beneath the Franklin zinc deposit. The Furnace bed was metamorphosed and deformed along with its enclosing rocks during the Grenvillian orogeny, obscuring the original mineralogy and obliterating the original rock fabrics. The present mineralogy is manganiferous magnetite plus calcite. Trace hydrous silicates, some coexisting with fluorite, have fluorine contents that are among the highest ever observed in natural assemblages. Furnace bed calcite has ??13C values of -5 ?? 1 per mil relative to Peedee belemnite (PDB) and ??18O values of 11 to 20 per mil relative to Vienna-standard mean ocean water (VSMOW). The isotopic compositions do not vary as expected for an original siderite layer that decarbonated during metamorphism, but they are consistent with nearly isochemical metamorphism of an iron oxide + calcite protolith that is chemically and minerlogically similar to iron-rich sediments found near the Red Sea brine pools and isotopically similar to Superior-type banded iron formations. Other magniferous magnite + calcite bodies occur at approximately the same stratigraphic position as far 50 km from the zinc deposits. A model is presented in which the iron and zinc deposits formed along the western edge of a Middle Proterozoic marine basin. Zinc was transported by sulfate-stable brines and was precipitated under sulfate-stable conditions as zincian carbonates and Fe-Mn-Zn oxides and silicates. Whether the zincian assemblages settled from the water column or formed by replacement reactions in shallowly buried sediments is uncertain. The iron deposits formed at interfaces between anoxic and oxygenated waters. The Furnace magnetite bed resulted from seawater oxidation of hydrothermally transported iron near a brine conduit. Iron deposits also formed regionally on the basin floor at the interface betveen anoxic deep waters and oxygenated shallower waters. These deposits include not only manganiferous magnetite + calcite bodies similar to the Furnace magnetite bed but also silicate-facies deposits that formed by iron oxide accumulation where detrital sediment was abundant. A basin margin model can be extended to Grenvillian stratiform deposits in the northwest Adirondacks of New York and the Mont Laurier basin of Quebec. In these areas iron deposits (pyrite or magnetite) are found basinward of marble-hosted sphalerite deposits, such as those in the Balmat-Edwards district. Whether the iron and zinc precipitated as sulfide assemblages or carbonate-oxide-silicate assemblages depended on whether sufficient organic matter or other reductants were available in local sediments or bottom waters to stabilize H2S.

Temporal changes of environmental impact in the coastal marine area in front of a former mining zone, detected by means of benthic foraminifera

NASA Astrophysics Data System (ADS)

Romano, Elena; Bergamin, Luisa; Maggi, Chiara; Ausili, Antonella

2016-04-01

Benthic foraminifera are increasingly used to assess environmental quality of present and past marine environments. They are suitable for the study of ancient environments because their hard and small shells are preserved and abundant in sediment and an adequate number of them can be collected by small samples of sediment cores, supplying reliable data for a statistical approach. The study of foraminiferal assemblages, associated to sediment abiotic parameters, allows to define the anthropogenic impact along the time; reference conditions may be recognized in deep uncontaminated levels. The Sulcis Iglesiente Guspinese area (SW Sardinia, Italy) was affected in past times by intensive mining, which started in mid 19th century and ceased in 1990s. The marine area of Cala Domestica is located few kilometers from the mining district, where mainly galena and sphalerite were exploited. The area houses buildings for storage of minerals receives drainage material from mineral dumps determining a strong enrichment for several metals in the coastal sediments. Sediment core SI/69 was collected by means of vibrocorer in front of Cala Domestica beach, during a vast sampling survey aimed to environmental characterization of marine sediments. The core was subsampled in the laboratory, and a total of 28 levels were collected. Microfaunal, grain size and chemical (As, Ba, Cd, Cr, Cu, Fe, Hg, Mn, Ni, Pb, Zn) analyses were carried out on different aliquots of the same level. The quantitative analysis on benthic foraminifera was based on the count of at least 300 specimens per sample. Faunal parameters such as Foraminiferal Number (FN i.e. number of specimens / 1 g dry sediment) and species diversity (- index and H-index) were considered as potential indicators of environmental status. Principal Component Analysis (PCA) showed a group of strongly correlated metals (Ba, Cd, Cu, Hg, Mn, Pb and Zn), associated to the superficial samples. These elements displayed a typical profile along core depth, characterized by low steady concentration in the lower part of the core, and increased values in the upper 20 cm. This pattern, which displays for most elements the highest concentrations in the top level, may be considered as influenced by anthropogenic enrichment. Quantitative faunal data were compared with concentrations by means of Canonical Correspondence Analysis (CCA) to highlight the effects of contamination on biota. It highlighted the pollution-tolerant character of some foraminiferal species, which are nearly exclusively present in the upper 20 cm core interval. Moreover, CCA demonstrated that FN was negatively affected by the anthropogenically enriched metals. Foraminiferal assemblages do not show major changes along core depth and high species diversity would suggest, in general, a good environmental status through time. Nevertheless, the comparison of assemblages from the contaminated upper core interval with reference conditions of the pre impacted interval, reveals that heavy metal pollution determined the increase of the pollution-tolerant taxa and a great decrease of foraminiferal abundance. Consequently, a comprehensive degradation of the ecological status referable to mining activity and dumping was recognized in this study.

The Congolobe project, a multidisciplinary study of Congo deep-sea fan lobe complex: Overview of methods, strategies, observations and sampling

NASA Astrophysics Data System (ADS)

Rabouille, C.; Olu, K.; Baudin, F.; Khripounoff, A.; Dennielou, B.; Arnaud-Haond, S.; Babonneau, N.; Bayle, C.; Beckler, J.; Bessette, S.; Bombled, B.; Bourgeois, S.; Brandily, C.; Caprais, J. C.; Cathalot, C.; Charlier, K.; Corvaisier, R.; Croguennec, C.; Cruaud, P.; Decker, C.; Droz, L.; Gayet, N.; Godfroy, A.; Hourdez, S.; Le Bruchec, J.; Saout, J.; Le Saout, M.; Lesongeur, F.; Martinez, P.; Mejanelle, L.; Michalopoulos, P.; Mouchel, O.; Noel, P.; Pastor, L.; Picot, M.; Pignet, P.; Pozzato, L.; Pruski, A. M.; Rabiller, M.; Raimonet, M.; Ragueneau, O.; Reyss, J. L.; Rodier, P.; Ruesch, B.; Ruffine, L.; Savignac, F.; Senyarich, C.; Schnyder, J.; Sen, A.; Stetten, E.; Sun, Ming Yi; Taillefert, M.; Teixeira, S.; Tisnerat-Laborde, N.; Toffin, L.; Tourolle, J.; Toussaint, F.; Vétion, G.; Jouanneau, J. M.; Bez, M.; Congolobe Group:

2017-08-01

The presently active region of the Congo deep-sea fan (around 330,000 km2), called the terminal lobes or lobe complex, covers an area of 2500 km2 at 4700-5100 m water depth and 750-800 km offshore. It is a unique sedimentary area in the world ocean fed by a submarine canyon and a channel-levee system which presently deliver large amounts of organic carbon originating from the Congo River by turbidity currents. This particularity is due to the deep incision of the shelf by the Congo canyon, up to 30 km into the estuary, which funnels the Congo River sediments into the deep-sea. The connection between the river and the canyon is unique for major world rivers. In 2011, two cruises (WACS leg 2 and Congolobe) were conducted to simultaneously investigate the geology, organic and inorganic geochemistry, and micro- and macro-biology of the terminal lobes of the Congo deep-sea fan. Using this multidisciplinary approach, the morpho-sedimentary features of the lobes were characterized along with the origin and reactivity of organic matter, the recycling and burial of biogenic compounds, the diversity and function of bacterial and archaeal communities within the sediment, and the biodiversity and functioning of the faunal assemblages on the seafloor. Six different sites were selected for this study: Four distributed along the active channel from the lobe complex entrance to the outer rim of the sediment deposition zone, and two positioned cross-axis and at increasing distance from the active channel, thus providing a gradient in turbidite particle delivery and sediment age. This paper aims to provide the general context of this multidisciplinary study. It describes the general features of the site and the overall sampling strategy and provides the initial habitat observations to guide the other in-depth investigations presented in this special issue. Detailed bathymetry of each sampling site using 0.1-1 m resolution multibeam obtained with a remotely operated vehicle (ROV) shows progressive widening and smoothing of the channel-levees with increasing depth and reveals a complex morphology with channel bifurcations, erosional features and massive deposits. Dense ecosystems surveyed in the study area gather high density clusters of two large-sized species of symbiotic Vesicomyidae bivalves and microbial mats. These assemblages, which are rarely observed in sedimentary zones, resemble those based on chemosynthesis at cold-seep sites, such as the active pockmarks encountered along the Congo margin, and share with these sites the dominant vesicomyid species Christineconcha regab. Sedimentation rates estimated in the lobe complex range between 0.5 and 10 cm yr-1, which is 2-3 orders of magnitude higher than values generally encountered at abyssal depths. The bathymetry, faunal assemblages and sedimentation rates make the Congo lobe complex a highly peculiar deep-sea habitat driven by high inputs of terrigenous material delivered by the Congo channel-levee system.

Variability of intertidal foraminferal assemblages in a salt marsh, Oregon, USA

USGS Publications Warehouse

Milker, Yvonne; Horton, Benjamin P.; Nelson, Alan R.; Engelhart, Simon E.; Witter, Robert C.

2015-01-01

We studied 18 sampling stations along a transect to investigate the similarity between live (rose Bengal stained) foraminiferal populations and dead assemblages, their small-scale spatial variations and the distribution of infaunal foraminifera in a salt marsh (Toms Creek marsh) at the upper end of the South Slough arm of the Coos Bay estuary, Oregon, USA. We aimed to test to what extent taphonomic processes, small-scale variability and infaunal distribution influence the accuracy of sea-level reconstructions based on intertidal foraminifera. Cluster analyses have shown that dead assemblages occur in distinct zones with respect to elevation, a prerequisite for using foraminifera as sea-level indicators. Our nonparametric multivariate analysis of variance showed that small-scale spatial variability has only a small influence on live (rose Bengal stained) populations and dead assemblages. The dissimilarity was higher, however, between live (rose Bengal stained) populations in the middle marsh. We observed early diagenetic dissolution of calcareous tests in the dead assemblages. If comparable post-depositional processes and similar minor spatial variability also characterize fossil assemblages, then dead assemblage are the best modern analogs for paleoenvironmental reconstructions. The Toms Creek tidal flat and low marsh vascular plant zones are dominated by Miliammina fusca, the middle marsh is dominated by Balticammina pseudomacrescens and Trochammina inflata, and the high marsh and upland–marsh transition zone are dominated by Trochamminita irregularis. Analysis of infaunal foraminifera showed that most living specimens are found in the surface sediments and the majority of live (rose Bengal stained) infaunal specimens are restricted to the upper 10 cm, but living individuals are found to depths of 50 cm. The dominant infaunal specimens are similar to those in the corresponding surface samples and no species have been found living solely infaunally. The total numbers of infaunal foraminifera are small compared to the total numbers of dead specimens in the surface samples. This suggests that surface samples adequately represent the modern intertidal environment in Toms Creek.

Employing lidar to detail vegetation canopy architecture for prediction of aeolian transport

USGS Publications Warehouse

Sankey, Joel B.; Law, Darin J.; Breshears, David D.; Munson, Seth M.; Webb, Robert H.

2013-01-01

The diverse and fundamental effects that aeolian processes have on the biosphere and geosphere are commonly generated by horizontal sediment transport at the land surface. However, predicting horizontal sediment transport depends on vegetation architecture, which is difficult to quantify in a rapid but accurate manner. We demonstrate an approach to measure vegetation canopy architecture at high resolution using lidar along a gradient of dryland sites ranging from 2% to 73% woody plant canopy cover. Lidar-derived canopy height, distance (gaps) between vegetation elements (e.g., trunks, limbs, leaves), and the distribution of gaps scaled by vegetation height were correlated with canopy cover and highlight potentially improved horizontal dust flux estimation than with cover alone. Employing lidar to estimate detailed vegetation canopy architecture offers promise for improved predictions of horizontal sediment transport across heterogeneous plant assemblages.

Selective dissolution of siliceous microfossils observed in a box core from the north-east equatorial Pacific

USGS Publications Warehouse

Kadko, D.; Blueford, J.R.; Burckle, L.H.; Barron, J.

1983-01-01

A box core taken at 11??50.3??? N and 137??28.2??? W in the Central Pacific manganese nodule province was studied to determine the pattern of diatom and radiolarian preservation with depth in the sediment, as well as to observe downcore variations in clay mineralogy. We observed marked deterioration of the siliceous microfossils within the upper 30 cm of this sediment; over this depth interval the Quaternary diatoms disappear first, followed deeper downcore by the dissolution of Quaternary radiolarians. Tertiary microfossils in general were the most corrosion resistant, and the residual microfossil assemblage in the lower part of the core consisted of fragmented, robust Tertiary forms. Consequently, the apparent biostratigraphical age of the sediment appeared much greater than the age suggested by mineralogical and radioisotopic data. ?? 1983 Nature Publishing Group.

Digital database of microfossil localities in Alameda and Contra Costa Counties, California

USGS Publications Warehouse

McDougall, Kristin; Block, Debra L.

2014-01-01

The eastern San Francisco Bay region (Contra Costa and Alameda Counties, California) is a geologically complex area divided by faults into a suite of tectonic blocks. Each block contains a unique stratigraphic sequence of Tertiary sediments that in most blocks unconformably overlie Mesozoic sediments. Age and environmental interpretations based on analysis of microfossil assemblages are key factors in interpreting geologic history, structure, and correlation of each block. Much of this data, however, is distributed in unpublished internal reports and memos, and is generally unavailable to the geologic community. In this report the U.S. Geological Survey microfossil data from the Tertiary sediments of Alameda and Contra Costa counties are analyzed and presented in a digital database, which provides a user-friendly summary of the micropaleontologic data, locality information, and biostratigraphic and ecologic interpretations.

Neandertal and Denisovan DNA from Pleistocene sediments.

PubMed

Slon, Viviane; Hopfe, Charlotte; Weiß, Clemens L; Mafessoni, Fabrizio; de la Rasilla, Marco; Lalueza-Fox, Carles; Rosas, Antonio; Soressi, Marie; Knul, Monika V; Miller, Rebecca; Stewart, John R; Derevianko, Anatoly P; Jacobs, Zenobia; Li, Bo; Roberts, Richard G; Shunkov, Michael V; de Lumley, Henry; Perrenoud, Christian; Gušić, Ivan; Kućan, Željko; Rudan, Pavao; Aximu-Petri, Ayinuer; Essel, Elena; Nagel, Sarah; Nickel, Birgit; Schmidt, Anna; Prüfer, Kay; Kelso, Janet; Burbano, Hernán A; Pääbo, Svante; Meyer, Matthias

2017-05-12

Although a rich record of Pleistocene human-associated archaeological assemblages exists, the scarcity of hominin fossils often impedes the understanding of which hominins occupied a site. Using targeted enrichment of mitochondrial DNA, we show that cave sediments represent a rich source of ancient mammalian DNA that often includes traces of hominin DNA, even at sites and in layers where no hominin remains have been discovered. By automation-assisted screening of numerous sediment samples, we detected Neandertal DNA in eight archaeological layers from four caves in Eurasia. In Denisova Cave, we retrieved Denisovan DNA in a Middle Pleistocene layer near the bottom of the stratigraphy. Our work opens the possibility of detecting the presence of hominin groups at sites and in areas where no skeletal remains are found. Copyright © 2017, American Association for the Advancement of Science.

The principles of cryostratigraphy

NASA Astrophysics Data System (ADS)

French, Hugh; Shur, Yuri

2010-08-01

Cryostratigraphy adopts concepts from both Russian geocryology and modern sedimentology. Structures formed by the amount and distribution of ice within sediment and rock are termed cryostructures. Typically, layered cryostructures are indicative of syngenetic permafrost while reticulate and irregular cryostructures are indicative of epigenetic permafrost. 'Cryofacies' can be defined according to patterns of sediment characterized by distinct ice lenses and layers, volumetric ice content and ice-crystal size. Cryofacies can be subdivided according to cryostructure. Where a number of cryofacies form a distinctive cryostratigraphic unit, these are termed a 'cryofacies assemblage'. The recognition, if present, of (i) thaw unconformities, (ii) other ice bodies such as vein ice (ice wedges), aggradational ice and thermokarst-cave ('pool') ice, and (iii) ice, sand and gravelly pseudomorphs is also important in determining the nature of the freezing process, the conditions under which frozen sediment accumulates, and the history of permafrost.

Nannofossils in upper quaternary bottom sediments of back-arc basins in the southwestern Pacific

NASA Astrophysics Data System (ADS)

Dmitrenko, O. B.

2015-05-01

The analysis of calcareous nannoplankton assemblages in bottom sediments sampled during Cruise 21 of the R/V Akademik Mstislav Keldysh in three areas located in back-arc basins of the southwestern Pacific (western Woodlark in the Solomon Sea, Manus in the Bismarck Sea, Central Lau) reveal that they belong to the Emiliania huxleyi Acme Zone, the most detailed one in the Gartner's scale of 1977. The content of coccoliths and their taxonomic composition indicate warm subtropical-tropical conditions. Long cores demonstrate a decrease in species diversity reflecting the transition from the cold late Pleistocene to the Holocene. The changes in species diversity and presence/absence of thermophilic representatives indicate transformation of depositional environments with unstable conditions in the water column and bottom layer, seismic activity, and widely developed processes of sediment redistribution and reworking.

A new assemblage of stem pecoran ruminants from the Oligocene Chitarwata Formation, Bugti Hills, Baluchistan, Pakistan: Paleoenvironmental and paleobiogeographic implications

NASA Astrophysics Data System (ADS)

Métais, Grégoire; Mennecart, Bastien; Roohi, Ghazala

2017-04-01

A new assemblage of stem pecoran ruminants from the Oligocene Chitarwata Formation (lower Bugti Member), Bugti Hills (Pakistan), consists of three identified genera and another indeterminate ruminant. Although limited, the dental and postcranial material is sufficient to identify the genera Amphitragulus and Mosaicomeryx, two common forms known from middle to late Oligocene deposits of Europe, thus reinforcing the 'middle' Oligocene age of the lowermost Chitarwata Formation. Mosaicomeryx is reported for the first time from the Indian Subcontinent and this occurrence considerably expands its geographical distribution. A new genus and species, Paalitherium gurki, is erected on the basis of an unusual and unique association of characters on its lower molars. The unclear definition and occurrences of? Gelocus gajensis Pilgrim, 1912 are re-examined in the light of new data from the Bugti and Zinda Pir areas (Pakistan). The new ruminant fauna from Paali is clearly distinctive from the early Miocene assemblage known from Bugti. In accordance with other fossil evidence, the ruminant fauna described here suggests the existence of a tropical forested environment under monsoonal regime with soft food supplies during the time of deposition of the lowermost Chitarwata Formation.

Palaeomagnetism and geochemistry of Early Palaeozoic rocks of the Barrandian (Teplé-Barrandian Unit, Bohemian Massif): palaeotectonic implications

NASA Astrophysics Data System (ADS)

Patočka, F.; Pruner, P.; Štorch, P.

The Barrandian area (the Teplá-Barrandian unit, Bohemian Massif) provided palaeomagnetic results on Early Palaeozoic rocks and chemical data on siliciclastic sediments of both Middle Cambrian and Early Ordovician to Middle Devonian sedimentary sequences; an outcoming interpretation defined source areas of clastic material and palaeotectonic settings of the siliciclastic rock deposition. The siliciclastic rocks of the earliest Palaeozoic sedimentation cycle, deposited in the Cambrian Příbram-Jince Basin of the Barrandian, were derived from an early Cadomian volcanic island arc developed on Neoproterozoic oceanic lithosphere and accreted to a Cadomian active margin of northwestern Gondwana. Inversion of relief terminated the Cambrian sedimentation, and a successory Prague Basin subsided nearby since Tremadocian. Source area of the Ordovician and Early Silurian shallow-marine siliciclastic sediments corresponded to progressively dissected crust of continental arc/active continental margin type of Cadomian age. Since Late Ordovician onwards both synsedimentary within-plate basic volcanics and older sediments had been contributing in recognizable proportions to the siliciclastic rocks. The siliciclastic sedimentation was replaced by deposition of carbonate rocks throughout late Early Silurian to Early Devonian period of withdrawal of the Cadomian clastic material source. Above the carbonates an early Givetian flysch-like siliciclastic suite completed sedimentation in the Barrandian. In times between Middle Cambrian and Early/Middle Devonian boundary interval an extensional tectonic setting prevailed in the Teplá-Barrandian unit. The extensional regime was related to Early Palaeozoic large-scale fragmentation of the Cadomian belt of northwestern Gondwana and origin of Armorican microcontinent assemblage. The Teplá-Barrandian unit was also engaged in a peri-equatorially oriented drift of Armorican microcontinent assemblage throughout the Early Palaeozoic: respective palaeolatitudes of 58°S (Middle Cambrian) and 17°S (Middle Devonian) were inferred for the Barrandian rocks. The Middle Devonian flysch-like siliciclastics of the Prague Basin suggest a reappearance of the deeply dissected Cadomian source area in a proximity of the Barrandian due to early Variscan convergences and collisions of the Armorican microcontinents. Significant palaeotectonic rotations are palaeomagnetically evidenced to take place during oblique convergence and final docking of the Teplá-Barrandian microplate within the Variscan terrane mosaic of the Bohemian Massif.

Subduction factory in an ampoule: Experiments on sediment-peridotite interaction under temperature gradient conditions

NASA Astrophysics Data System (ADS)

Woodland, A. B.; Bulatov, V. K.; Brey, G. P.; Girnis, A. V.; Höfer, H. E.; Gerdes, A.

2018-02-01

To better understand processes above subducted oceanic slabs, we have undertaken experiments with juxtaposed sediment and peridotite layers at pressures of 7.5 and 10.5 GPa at a controlled temperature gradient from ∼100 to ∼500 °C per a sample length of ∼3 mm. The sediment starting material contains H2O (6.9 wt%) and CO2 (5.9 wt%) and has a major-element composition similar to GLOSS (Plank and Langmuir, 1998) doped with trace elements at 10-100 ppm levels. Several experiments were conducted with ∼0.5 wt% Cl or F. The peridotite layer is composed of natural olivine (66 wt%), orthopyroxene (27 wt%) and garnet (7 wt%) mixed with ∼15 wt% graphite. Several experimental configurations were investigated, but the "basic" setup has the sediment layer at the bottom in the cold zone (400-1200 °C) overlain by peridotite at 900-1500 °C. The temperature distribution was determined by two thermocouples and orthopyroxene-garnet thermometry. Features common to many experiments are (1) the development of multiple layers of various lithologies and a pool of hydrous silicate or carbonate-silicate melt in the hottest part of the capsule; (2) replacement of olivine by orthopyroxene in the metaperidotite; (3) preservation and growth of garnet and local development of magnesite in the metaperidotite layer; (4) enrichment in garnet within the metasediment layer at the contact with the metaperidotite; (5) formation of a clinopyroxene-garnet assemblage at the bottom (the coldest part); (6) presence of K-bearing phases (phlogopite or phengite) and carbonates in the metasediment layer only at temperatures <700 °C; and (7) occurrence of accessory zircon, rutile and phosphates in the coldest regions. In terms of element redistribution, the peridotite becomes strongly enriched in SiO2 compared to the starting composition, and the sediment gains MgO, FeO and Cr2O3. Potassium is fully extracted into the melt, while Na and Ca are largely retained in the coldest part of the metasediment layer in clinopyroxene, Ca-rich garnet and aragonite. The melt is a product of interaction between partial melt or fluid from the sediment and peridotite. It has a silico-carbonatite composition with variable SiO2, MgO, FeO and CaO contents and low Al2O3. The addition of Cl has almost no effect on element distribution, whereas the addition of F results in the appearance of humite-group minerals containing significant amounts of Ti. Trace-element distribution is controlled by pressure, temperature and mineral assemblages. At low temperatures in the sediment layer (<700 °C) Ba, Rb, Sr and Li are much more mobile than REE and HFSE, which results in high Ba/La, Ba/Nb, Sr/Nb etc. (fluid metasomatism). At higher temperatures in the sediment layer, the melt is markedly enriched in Ba, Rb, Sr, LREE and U relative to Ti, MREE and HREE. Negative Nb-Ta and Zr-Hf anomalies in melts are caused by the retention of rutile, zircon and humite-group minerals in the solid residue. Thermodiffusion may affect the ratios of some highly incompatible elements (e.g., Ta/La). Possible applications of the results to natural deep subduction are discussed in view of variations in mineral assemblages and trace element ratios.

Hudson River Paleoclimate, Sea Level, and Human Impact: A Record From Piermont Marsh, NY

NASA Technical Reports Server (NTRS)

Kurdyla; Peteet, Dorothy; Liberman, Louisa; Sugar; Wong; Hansen, James E. (Technical Monitor)

2001-01-01

A 13.77 meter sediment core from Piermont Marsh, NY (40 00 N, 73 55W) records the local and regional vegetational and foraminiferal history of the Hudson Estuary. The sediments were sampled every 4 cm, which represents a decadal to centuryscale resolution. Basal sediment dating is in progress, and the 11-m depth represents about 4000 years. Changes in plant macrofossils and charcoal appear to indicate differences in salinIty and drought, suggesting changes in climate. Scirpus, Salicornia, and high levels of charcoal seem to indicate drier/more saline conditions, while lack of these macrofossils and increases in Chara/Nitella, aquatic leaves, and very little charcoal suggests wetter conditions. Other macrofossils include Carex, Juncus, Polygonum, Zanichellia, Ruppia. High resolution AMS dating of plant macrofossils is in progress, and will be compared with changes in Hudson River sediment cores offshore. Foraminiferal assemblages from key intervals of the core will be presented. Human impact in the upper sediments is visible from the influx of grass seeds, primarily Phragmites, and the ragweed pollen rise.

Sedimentary Records of Harmful Bloom-Producing Dinoflagellates from Alvarado Lagoon (Southwestern Gulf of Mexico)

NASA Astrophysics Data System (ADS)

Limoges, A.; Mertens, K. N.; ruiz-Fernandez, A. C.; Sánchez Cabeza, J. A.; de Vernal, A.

2014-12-01

Organic-walled dinoflagellate cyst assemblages were studied from a sediment core collected in Alvarado Lagoon (southwestern Gulf of Mexico) in order to evaluate their use as tracers of toxic algal blooms. The sedimentary record spans the last ~560 years (CE) and shows high abundances of Polysphaeridium zoharyi, the cyst of the dinoflagellate Pyrodinium bahamense, which is known to cause toxic blooms. Cyst fluxes in the sediment of the Alvarado lagoon suggest frequent blooms of Pyrodinium bahamense in the past hundreds of years. Moreover, the high concentrations of the cysts (~ 4000 cysts g-1) in the "modern" surface sediment reveal that the area is susceptible to be affected by future blooms, especially during seasons of heavy rain and wind, when cysts are resuspended in the water column. The dinoflagellate cyst bank in sediment deserves special attention as it may constitute a source for the export of cells in adjacent regions. The cyst of other harmful dinoflagellates have been recovered in the sediment. They notably include those of the benthic dinoflagellate Bysmatrum subsalsum, which is here reported for the first time.

Application of Habitat Equivalency Analysis to USACE Projects

DTIC Science & Technology

2009-04-01

reef, open - water bay bottoms, and water column habitats. Of the four case studies, Craney Island is the only one where the logic behind the choice of...Act (NEPA) of 1969, the Federal Water Pollution Act (Clean Water Act) of 1972, and the Water Resources Development Act (WRDA) of 1986, as well as...mitigation. These habitats support a diverse assemblage of sponges, algae , and soft and hard corals, provide habitat for larval fish, and are considered

Bioindicators of marine pollution. (Latest citations from Oceanic Abstracts database). Published Search

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1993-09-01

The bibliography contains citations concerning the use of marine plants and animals as indicators of organic and inorganic pollutant distribution. Topics include descriptions of specific species and assemblages, regional and local monitoring studies, and analyses of the soft and hard parts of marine animals. Studies of algae, bivalves, corals, crustaceans, bacterial counts, and seagrasses in estuaries and benthic areas are included. (Contains 250 citations and includes a subject term index and title list.)

Bioindicators of marine pollution. (Latest citations from Oceanic Abstracts). Published Search

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1993-12-01

The bibliography contains citations concerning the use of marine plants and animals as indicators of organic and inorganic pollutant distribution. Topics include descriptions of specific species and assemblages, regional and local monitoring studies, and analyses of the soft and hard parts of marine animals. Studies of algae, bivalves, corals, crustaceans, bacterial counts, and seagrasses in estuaries and benthic areas are included. (Contains 250 citations and includes a subject term index and title list.)

Effects of wave energy converters on the surrounding soft-bottom macrofauna (west coast of Sweden).

PubMed

Langhamer, O

2010-06-01

Offshore wave energy conversion is expected to develop, thus contributing to an increase in submerged constructions on the seabed. An essential concern related to the deployment of wave energy converters (WECs) is their possible impact on the surrounding soft-bottom habitats. In this study, the macrofaunal assemblages in the seabed around the wave energy converters in the Lysekil research site on the Swedish west coast and a neighbouring reference site were examined yearly during a period of 5 years (2004-2008). Macrobenthic communities living in the WECs' surrounding seabed were mainly composed by organisms typical for the area and depth off the Swedish west coast. At both sites the number of individuals, number of species and biodiversity were low, and were mostly small, juvenile organisms. The species assemblages during the first years of sampling were significantly different between the Lysekil research site and the nearby reference site with higher species abundance in the research site. The high contribution to dissimilarities was mostly due to polychaetes. Sparse macrofaunal densities can be explained by strong hydrodynamic forces and/or earlier trawling. WECs may alter the surrounding seabed with an accumulation of organic matter inside the research area. This indicates that the deployment of WECs in the Lysekil research site tends to have rather minor direct ecological impacts on the surrounding benthic community relative to the natural high variances.

Mid to late-Holocene diatom microfossils and geochemical proxies as evidence for paleoclimate in the Hudson River estuary, New York

NASA Astrophysics Data System (ADS)

Gurung, D.; McHugh, C. M.; Kenna, T. C.; Burckle, L.

2009-05-01

New methodologies that combine the use of microfossil diatom assemblages, and elemental geochemistry (bromine (Br)) are being developed to assess late Holocene climatic variability in estuaries. The main idea is that in an estuary the saltwater wedge fluctuates in response to the volume of fluvial discharge that depends on surface runoff from precipitation and melting of snow (spring freshet). During times of high precipitation the saltwater wedge is pushed seaward. In contrast, during times of drought the saltwater wedge moves landward into the estuary. The Hudson River estuary in New York was flooded by marine waters in the early Holocene and at present its sedimentation patterns are in a state of dynamic equilibrium. Guided by high-resolution multibeam bathymetry, sediment cores (˜6 m in length) were recovered from the oligohaline parts of the estuary where discharge and precipitation changes have more impact on the saltwater wedge fluctuations. In those cores that showed continuous sedimentation, diatom assemblages and Br (ppm) were studied and used as proxies for salinity. Diatom assemblages (marine, freshwater and brackish) were identified and counted and Br (ppm) was measured by X-ray fluorescence spectrometry with an Innov-X portable system. The results were calibrated to an Pb-210 age model and compared with instrumental data of precipitation, river discharge, and Palmer Drought Severity Index (PDSI), The results obtained from two different locations show that marine diatom abundance and Br content correlate with periods of high precipitation during 1992-1988; 1985-1980; 1976-1968; 1962-1958; and increase with periods of low precipitation or droughts in 1987-1985; 1980-1975; 1967-1962; 1943-1938. The mid to late Holocene record shows a variability on the scale of ˜300 to 400 years similar to that obtained by Cronin et al. (2003) for Chesapeake Bay and related to the North Atlantic Oscillation. From 1992 to the present, both marine diatoms and Br ppm increase dramatically and do not correlate to the precipitation record. This increase in salinity is observed in all the cores and could be the result of relative sea level rise into the estuary.

A Record of Holocene Paleoclimate Evolution from Robertson Bay, Victoria Land, Antarctica

NASA Astrophysics Data System (ADS)

Riesselman, C. R.; Truax, O.; Wilson, G. S.; Parker, R. L.; Yoo, K. C.; Lee, J. I.; Levy, R. H.; Mckay, R. M.

2017-12-01

Regionally representative records of how Antarctica responded to the transition from the Last Glacial Maximum into the Holocene are an essential component of understanding the processes by which the Antarctic cryosphere responds to a changing climate. Here, we present a high-resolution record of Holocene Antarctic paleoclimate evolution from a previously unstudied section of the Victoria Land margin. In 2015 the Korea Polar Research Institute collected a 571 cm sediment core, GC57, from Robertson Bay, a protected embayment west of Cape Adare and adjacent to the outlet glaciers of the Transantarctic Mountains. Using diatom assemblages, bulk sediment geochemistry, and the magnetic properties of GC57, we aim to reconstruct the response of the East Antarctic Ice Sheet to warming associated with deglaciation and the Holocene climatic optima at the interface between the Ross Sea and the Southern Ocean. Our multiproxy approach allows us to study sea ice extent, seasonality, ocean stratification and circulation, and primary productivity from the mid-Holocene (7,400 14C year BP) to the present. A sea-ice associated diatom assemblage indicative of summer sea surface temperatures below 0˚C dominates the basal section of GC57. Although diatoms are well preserved, the unit is characterized by low wt% biogenic silica (average 9%) and a high concentration of magnetic minerals, indicating that biogenic production persisted despite substantial terrigenous input into the bay. A rapid transition at 4708 14C yr BP is identified by a steep increase in wt% BSi (average 13%), a decrease in magnetic minerals, and a subtle assemblage change towards sea-ice associated diatoms with slightly warmer temperature tolerances. The novel ramped pyrolosis 14C dating methodology allows us to date the carbon fixed concurrent with deposition and generate a robust age model for GC57 with an accuracy previously difficult to achieve given the uncertainties associated with dating bulk acid insoluble organic matter in Antarctic sediments. When complete, this reconstruction of Holocene paleoenvironmental change will be integrated with results from an international group of collaborators as part of a broader project to identify drivers of Antarctic climate dynamics during intervals of rapid change.

An AEM-TEM study of weathering and diagenesis, Abert Lake, Oregon: II. Diagenetic modification of the sedimentary assemblage

USGS Publications Warehouse

Banfield, J.F.; Jones, B.F.; Veblen, D.R.

1991-01-01

This paper compares the mineralogy and chemistry of clay minerals in sediments from various depths and positions in Abert Lake and surrounding playa with those of the weathered materials entering the lake in order to reveal the nature and extent of post-depositional mineralogical modification. Analytical electron microscope (AEM) data from individual clay particles reveal that each sample is comprised of a highly inhomogeneous smectite assemblage. The thin clay flakes (commonly less than 10 nm wide) display a complete range in octahedral sheet compositions from nearly dioctahedral to nearly trioctahedral. The very abundant Mg-rich lake smectites with an estimated composition K0.29(Al0.23-Mg2.16Fe0.30)Si3.80Al0.20O10(OH)2 are not formed by weathering. This confirms the importance of diagenetic Mg uptake. Lattice-fringe imaging failed to reveal distinct brucite-like or vermiculite-like layers, suggesting that interstratifications of this type are rare or absent. Siliceous coatings on clay particles (identified by silica excess in smectite analyses) seem to favor topotactic overgrowth of stevensite rather than addition of brucite-like layers to the dioctahedral nuclei. The growth of K-stevensite dilutes the Al content of the crystal, and thus the increasing diagenetic modification reduces rather than supplements its illite component. Smectite compositions within individual samples were highly variable, yet source-related characteristics such as the abundance of Fe-rich smectite were apparent. Little evidence for systematic K or Mg enrichment with depth was identified in samples from depths of down to 16 feet below the sediment-water interface. The most magnesian assemblages are associated both with weathering sources of Mg-rich smectite and playa environments subjected to repeated wetting and drying cycles. Thus, the observations suggest that clay compositions primarily reflect changes in lake levels, brine composition, and source characteristics, rather than time and depth/compaction effects. Other diagenetic reactions in the sediment include recrystallization of Na-rich silica gel and diatom fragments. Abundant, submicron-sized, untwinned, euhedral crystals of K-feldspar are interpreted to be authigenic in origin. ?? 1991.

Palynological and sedimentary analysis of the Igarapé Ipiranga and Querru 1 outcrops of the Itapecuru Formation (Lower Cretaceous, Parnaíba Basin), Brazil

NASA Astrophysics Data System (ADS)

Ferreira, Neila N.; Ferreira, Elizabete P.; Ramos, Renato R. C.; Carvalho, Ismar S.

2016-03-01

The siliciclastic sediments of the Itapecuru Formation occur in a large area of the Parnaíba Basin and its deposits crop out along the Itapecuru River, in Maranhão State, northern Brazil. The palynological analysis of the Igarapé Ipiranga and Querru 1 outcrops strata yields a rich and diversified data. The presence of index-palynofloras in assemblages allows the identification of the Complicatisaccus cearensis Zone, of Late Aptian-Early Albian age. Terrestrial palynomorphs are abundant in the assemblages, being represented by bryophytes and pteridophytes, especially perisporate trilete spores (Crybelosporites and Perotrilites), and gymnosperms and angiosperms (Afropollis and Elaterosporites). The composition of palynological assemblages suggests the presence of moist soils for both outcrops. Acritarchs were recovered in the Querru 1 outcrop, which suggest a marine setting supporting a tidal flat environment indicated by facies associations. Furthermore, reworked Paleozoic palynomorphs were observed in the Querru 1 outcrop. The microflora from Igarapé Ipiranga outcrop suggests terrestrial environment corroborating with floodplain environment indicated by facies association.

Mesophotic and Deep-sea Demersal Fish Assemblages on Rugged Hardbottoms of the Greater-Lesser Antilles Transition Zone

NASA Astrophysics Data System (ADS)

Quattrini, A.; Chaytor, J. D.; Demopoulos, A. W.

2016-02-01

Caribbean fish communities in shallow waters have been well studied along the Greater and Lesser Antilles for decades; however, the mesophotic (>50 m) and deep (>200 m) assemblages remain poorly known due to the technical challenges associated with surveying greater depths. Numerous seafloor features (e.g., seamounts, island ridges, banks) punctuate the insular margins and increase habitat heterogeneity, which may lead to enhanced diversity of the deeper demersal fish community in the region. Recent (2013-2015) expeditions in the area using the E/Vs Nautilus and Okeanos Explorer and ROVs Hercules and Deep Discoverer surveyed fish communities during 18 dives across different seafloor features at depths ranging from 64 to 2944 m. These surveys enabled us to investigate whether demersal fish assemblages differed among these seafloor features and/or in response to other (e.g., dissolved oxygen, microhabitat) abiotic factors. A totla of 3,532 fishes representing at least 140 species in 53 families were documented. Assemblage differences were primarily influenced by depth, but differences in microhabitat (i.e., soft substrate, profile, slope) further influenced assemblage structure. Several range and depth extensions were documented. The morid Lepidion sp., previously known only from the eastern and the western North Atlantic, was documented on Norôit Seamount. A new species of labrid, Polylepion sp. A, known only from Curacao, was documented on Conrad Seamount. Many mesophotic reef species were observed deeper than previously known, including the butterflyfishes Chaetodon sedentarius and Prognathodes aculeatus. This study further supports the importance of environmental conditions, particularly depth and microhabitat, influencing local-scale distribution of demersal fishes, while demonstrating how little is still known about the biogeography of numerous deep-sea and mesophotic species.

Biological effects of long term fine limestone tailings discharge in a fjord ecosystem.

PubMed

Brooks, Lucy; Melsom, Fredrik; Glette, Tormod

2015-07-15

Benthic infaunal data collected from 1993 to 2010 were analysed to examine the effect of long term discharge of fine limestone tailings on macrofaunal species assemblages in a fjord. Relative distance from the outfall and proportion of fine tailings in the sediment were correlated with benthic community structure. Diversity decreased with increasing proportion of fine tailings. Biological Traits Analysis (BTA) was used to explore the temporal and spatial effects of the tailings gradient on macrofaunal functional attributes. BTA revealed that all stations along a pressure gradient of fine limestone tailings were dominated by free-living species. As the proportion of fine tailings in the sediment increased, there was an increase in fauna that were smaller, highly mobile, living on or nearer the surface sediment, with shorter lifespans. There was a decrease in permanent tube dwellers, those fauna with low or no mobility, that live deeper in the sediment and have longer lifespans (>5 yrs). Copyright © 2015 Elsevier Ltd. All rights reserved.

Effects of short-term environmental disturbances on living benthic foraminifera during the Pacific oyster summer mortality in the Marennes-Oléron Bay (France).

PubMed

Bouchet, Vincent M P; Debenay, Jean-Pierre; Sauriau, Pierre-Guy; Radford-Knoery, Joël; Soletchnik, Patrick

2007-09-01

Sediment cores were collected from April to August 2004 on tidal mudflats of the macrotidal Marennes-Oléron Bay (SW France), famous for the cultivation of Pacific oysters (Crassostrea gigas). The response of living (stained) benthic foraminifera to short-term biogeochemical disturbances in the sediment and overlying water, which may be involved in oyster summer mortality, was monitored. Short-term hypoxia occurred in early June, in conjunction with a sudden rise in temperature. In mid-June, the ammonia content of sediment porewater increased, leading to potentially maximal flux towards overlying waters. Foraminiferal assemblages, particularly in the topmost layer, were altered. Ammonia tepida was the most tolerant to temperature increase and hypoxic conditions whereas Brizalina variabilis and Haynesina germanica were sensitive to organic degradation and hypoxia. Cribroelphidium gunteri was the most opportunistic during recolonisation. Benthic foraminifera showed that short-term biochemical changes in the sediment are toxic and may be involved in the summer mortality of Pacific oysters.

Preliminary Results of a Modern Watershed Study from Lake Junín, Peru: Biomarker Assemblages in Terrestrial and Aquatic Plants and Surface Sediments

NASA Astrophysics Data System (ADS)

Woods, A.; Werne, J. P.; Rodbell, D. T.; Abbott, M. B.

2016-12-01

Lake Junín is a large, evaporatively-enriched lake in the central Peruvian Andes that is ideally situated to record variability in the South American Summer Monsoon, and sediment cores recovered by the Lake Junín Deep Drilling Project in 2015 span several glacial/interglacial cycles. Compound-specific stable hydrogen isotopes from leaf waxes offer the potential to reconstruct changes in monsoon strength and evapotranspiration for the entire sediment record, and can be compared with the carbonate-derived oxygen isotope record that is preserved only during interglacials. To characterize the modern proxy system, leaf samples were collected from terrestrial and aquatic species that are representative of the vegetation in the watershed. The compound distributions, concentrations, and D/H ratios of n-alkanes and n-alkanoic acids from plants and surface sediments were analyzed to develop site-specific calibrations of both terrestrial and aquatic isotopic signals, for application to downcore biomarker analyses.

Pleistocene pollen stratigraphy from borehole 81/34, devil's hole area, central north sea

NASA Astrophysics Data System (ADS)

Ekman, Sten R.

1998-09-01

Twelve pollen assemblage zones are identified in a 229 m deep borehole (BH 81/34) from the Devil's Hole area in the central North Sea (British sector). The sediment from this borehole is Early to Late Pleistocene in age and the observation of massulae from Azolla filiculoides in sediment with reversed polarity indicates an age younger than the Olduvai geomagnetic event for the entire sequence. The Early Pleistocene sediments were at least partly deposited in the vicinity of a river outlet and can be correlated either with the Eburonian or the Menapian cold stage and with the Bavel interglacial and the Linge glacial within the Bavelian stage in the Dutch stratigraphy. The Middle Pleistocene sequence contains an interval rich in Abies, Picea and Pinus, probably deposited during the end of either Cromerian Complex interglacial IV (Noordbergum) or possibly the Holsteinian. The uppermost 80 m of the core contains high frequencies of pre-Quaternary and deteriorated palynomorphs indicating extensive glacial or glaciofluvially reworked sediment.

Impacts of dredged-material disposal on the coastal soft-bottom macrofauna, Saronikos Gulf, Greece.

PubMed

Katsiaras, N; Simboura, N; Tsangaris, C; Hatzianestis, I; Pavlidou, A; Kapsimalis, V

2015-03-01

Dredged sediments derived by the low course and estuary of the metropolitan river of Athens (Kifissos River) were dumped every day for 21 months to an open-sea site in the Saronikos Gulf. The spoil-ground and surrounding area was monitored prior, during and post to dumping for 24 months, over 6-month intervals. Dumping significantly changed the granulometry of the pre-existing superficial sediments to finer-grained only in the spoil ground and increased the sediment contamination load (aliphatic, polycyclic aromatic hydrocarbons and heavy metals) throughout the study area. Microtox® SPT showed that sediment toxicity levels were high at almost all sampling stations. During dumping, burial of natural soft-bottom habitats degraded severely the communities of the spoil-ground resulting in an almost azoic state, as well as significantly declined the species number and abundance of benthic communities in locations up to 3.2 km away from the spoil-ground, due to dispersion of the spoil and smothering. Benthic indices on the surrounding sites were significantly correlated with hydrocarbon concentrations and sediment toxicity levels. Post to dumping, the macrofauna communities of the spoil-ground were still significantly degraded, but the surrounding areas showed patterns of recovery. However, the high concentrations of aliphatic, polycyclic aromatic hydrocarbons and levels of toxicity persisted in the sediments after the ceasing of dumping operations in the study area, implying the ecological hazard imposed on the area. Copyright © 2014 Elsevier B.V. All rights reserved.

Diatoms as Proxies for Abrupt Events in the Hudson River Estuary

NASA Astrophysics Data System (ADS)

Skorski, W.; Abbott, D. H.; Recasens, C.; Breger, D. L.

2014-12-01

The Hudson River estuary has been subject to many abrupt events throughout its history including hurricanes, droughts and pluvials. Hurricanes in particular are rare, discrete events that if fingerprinted can be used to develop better age models for Hudson River sediments. Proxies use observed physical characteristics or biological assemblages (e.g. diatom and foraminiferal assemblages) as tools to reconstruct past conditions prior to the modern instrumental record. Using a sediment core taken from the Hudson River (CDO2-29A), in New York City, drought and pluvial layers were selected based on Cs-137 dating while hurricane layers were determined from occurrences of tropical to subtropical foraminifera. Contrary to previous studies (Weaver, 1970, Weiss et al, 1978), more than sixty different diatom species have been identified using a scanning electron microscope (SEM). Cosmopolitan, hurricane and drought assemblages have begun to be identified after observing multiple layers (Table 1). Tropical foraminifera dominated by Globigerinoides ruber pink were also found in a hurricane layer that we infer was deposited during Hurricane Belle in 1976. More diatom abundance analyses and cataloged SEM pictures will provide further insight into these proxies. Table 1 Diatom Genera and Species Environment Clarification Cyclotella caspia Planktonic, marine-brackish Cosmopolitan Karayevia clevei Freshwater Cosmopolitan Melosira sp Planktonic, marine Cosmopolitan Thalassiosira sp Marine, brackish Cosmopolitan Staurosirella leptostauron Benthic, freshwater Cosmopolitan Actinoptychus senarius Planktonic or benthic, freshwater to brackish Hurricane and pluvial layers Amphora aff. sp Benthic, marine or freshwater Hurricane layers only Nitzschia sp Benthic, marine or freshwater Hurricane layers only Gomphonema sp Freshwater Hurricane layers only Surirella sp Marine-brackish Drought layer only Triceratium sp Marine Drought layer only Other Genera and species Environment Clarification Globigerinoides ruber pink Tropical Hurricane layers only Silicoflagellate sp Planktonic, marine Hurricane layers only

Historical trends in Chesapeake Bay dissolved oxygen based on benthic foraminifera from sediment cores

USGS Publications Warehouse

Karlsen, A.W.; Cronin, T. M.; Ishmans, S.E.; Willard, D.A.; Kerhin, R.; Holmes, C.W.; Marot, M.

2000-01-01

Environmentally sensitive benthic foraminifera (protists) from Chesapeake Bay were used as bioindicators to estimate the timing and degree of changes in dissolved oxygen (DO) over the past five centuries. Living foraminifers from 19 surface samples and fossil assemblages from 11 sediment cores dated by 210Pb, 137Cs, 14C, and pollen stratigraphy were analyzed from the tidal portions of the Patuxent, Potomac, and Choptank Rivers and the main channel of the Chesapeake Bay. Ammonia parkinsoniana, a facultative anaerobe tolerant of periodic anoxic conditions, comprises an average of 74% of modern Chesapeake foraminiferal assemblages (DO = 0.47 and 1.72 ml l-1) compared to 0% to 15% of assemblages collected in the 1960s. Paleoecological analyses show that A. parkinsoniana was absent prior to the late 17th century, increased to 10-25% relative frequency between approximately 1670-1720 and 1810-1900, and became the dominant (60-90%) benthic foraminiferal species in channel environments beginning in the early 1970s. Since the 1970s, deformed tests of A. parkinsoniana occur in all cores (10-20% of Ammonia), suggesting unprecedented stressful benthic conditions. These cores indicate that prior to the late 17th century, there was limited oxygen depletion. During the past 200 years, decadal scale variability in oxygen depletion has occurred, as dysoxic (DO = 0.1-1.0 ml l-1), perhaps short-term anoxic (DO < 0.1 ml l-1) conditions developed. The most extensive (spatially and temporally) anoxlc conditions were reached during the 1970s. Over decadal timescales, DO variability seems to be linked closely to climatological factors influencing river discharge; the unprecedented anoxia since the early 1970s is attributed mainly to high freshwater flow and to an increase in nutrient concentrations from the watershed.

Geomorphic and Ecological Disturbance and Recovery from Two Small Dams and Their Removal

PubMed Central

Tullos, Desirée D.; Finn, Debra S.; Walter, Cara

2014-01-01

Dams are known to impact river channels and ecosystems, both during their lifetime and in their decommissioning. In this study, we applied a before-after-control-impact design associated with two small dam removals to investigate abiotic and biotic recovery trajectories from both the elimination of the press disturbance associated with the presence of dams and the introduction of a pulse disturbance associated with removal of dams. The two case studies represent different geomorphic and ecological conditions that we expected to represent low and high sensitivities to the pulse disturbance of dam removal: the 4 m tall, gravel-filled Brownsville Dam on the wadeable Calapooia River and the 12.5 m tall, sand and gravel-filled Savage Rapids Dam on the largely non-wadeable Rogue River. We evaluated both geomorphic and ecological responses annually for two years post removal, and asked if functional traits of the macroinvertebrate assemblages provided more persistent signals of ecological disturbance than taxonomically defined assemblages over the period of study. Results indicate that: 1) the presence of the dams constituted a strong ecological press disturbance to the near-downstream reaches on both rivers, despite the fact that both rivers passed unregulated flow and sediment during the high flow season; 2) ecological recovery from this press disturbance occurred within the year following the restoration action of dam removal, whereas signals of geomorphic disturbance from the pulse of released sediment persisted two years post-removal, and 3) the strength of the press disturbance and the rapid ecological recovery were detected regardless of whether recovery was assessed by taxonomic or functional assemblages and for both case studies, in spite of their different geomorphic settings. PMID:25233231

Evidence disputing deforestation as the cause for the collapse of the ancient Maya polity of Copan, Honduras

PubMed Central

McNeil, Cameron L.; Burney, David A.; Burney, Lida Pigott

2009-01-01

Archaeologists have proposed diverse hypotheses to explain the collapse of the southern Maya lowland cities between the 8th and 10th centuries A.D. Although it generally is believed that no single factor was responsible, a commonly accepted cause is environmental degradation as a product of large-scale deforestation. To date, the most compelling scientific evidence used to support this hypothesis comes from the archaeological site of Copan, Honduras, where the analysis of a sediment core suggested a dramatic increase in forest clearance in the Late Classic period (A.D. 600–900). By contrast, in the work presented here, the authors’ analysis of a longer sediment core demonstrates that forest cover increased from A.D. 400 to A.D. 900, with arboreal pollen accounting for 59.8–71.0% of the pollen assemblage by approximately A.D. 780–980. The highest levels of deforestation are found about 900 B.C. when, at its peak, herb pollen made up 89.8% of the assemblage. A second, although less pronounced, period of elevated deforestation peaked at approximately A.D. 400 when herb pollen reached 65.3% of the assemblage. The first deforestation event likely coincided with the widespread adoption of agriculture, a pattern found elsewhere in Mesoamerica. The second period of forest clearance probably was associated with the incursion of Maya speakers into the Copan Valley and their subsequent construction of the earliest levels of the Copan Acropolis. These results refute the former hypothesis that the ancient Maya responded to their increasingly large urban population by exhausting, rather than conserving, natural resources. PMID:20018691

Archaeal Viruses Contribute to the Novel Viral Assemblage Inhabiting Oceanic, Basalt-Hosted Deep Subsurface Crustal Fluids

NASA Astrophysics Data System (ADS)

Nigro, O. D.; Rappe, M. S.; Jungbluth, S.; Lin, H. T.; Steward, G.

2015-12-01

Fluids contained in the basalt-hosted deep subsurface of the world's oceans represent one of the most inaccessible and understudied biospheres on earth. Recent improvements in sampling infrastructure have allowed us to collect large volumes of crustal fluids (~104 L) from Circulation Obviation Retrofit Kits (CORKs) placed in boreholes located on the eastern flank of the Juan de Fuca Ridge (JdFR). We detected viruses within these fluids by TEM and epifluorescence microscopy in samples collected from 2010 to 2014. Viral abundance, determined by epifluorescence counts, indicated that concentrations of viruses in subsurface basement fluids (~105 ml-1) are lower than the overlying seawater, but are higher in abundance than microbial cells in the same samples. Analysis of TEM images revealed distinct viral morphologies (rod and spindle-shaped) that resemble the morphologies of viral families infecting archaea. There are very few, if any, direct observations of these viral morphologies in marine samples, although they have been observed in enrichment cultures and their signature genes detected in metagenomic studies from hydrothermal vents and marine sediments. Analysis of metagenomes from the JdFR crustal fluids revealed sequences with homology to archaeal viruses from the rudiviridae, bicaudaviridae and fuselloviridae. Prokaryotic communities in fluids percolating through the basaltic basement rock of the JdFR flank are distinct from those inhabiting the overlying sediments and seawater. Similarly, our data support the idea that the viral assemblage in these fluids is distinct from viral assemblages in other marine and terrestrial aquatic environments. Our data also suggest that viruses contribute to the mortality of deep subsurface prokaryotes through cell lysis, and viruses may alter the genetic potential of their hosts through the processes of lysogenic conversion and horizontal gene transfer.

Community benthic paleoecology from high-resolution climate records: Mollusca and foraminifera in post-glacial environments of the California margin

NASA Astrophysics Data System (ADS)

Myhre, Sarah E.; Kroeker, Kristy J.; Hill, Tessa M.; Roopnarine, Peter; Kennett, James P.

2017-01-01

Paleoecological reconstructions of past climate are often based on a single taxonomic group with a consistent presence. Less is known about the relationship between multi-taxon community-wide change and climate variability. Here we reconstruct paleoecological change in a Late Quaternary (16.1-3.4 ka) sediment core from the California margin (418 m below sea level) of Santa Barbara Basin (SBB), USA, using Mollusca (Animalia) and Foraminifera (Rhizaria) microfossils. Building upon previous investigations, we use multivariate ordination and cluster analyses to interpret community-scale changes in these distinctly different taxonomic groups across discrete climate episodes. The strongest differences between seafloor biological communities occurred between glacial (prior to Termination IA, 14.7 ka) and interglacial climate episodes. Holocene communities were well partitioned, indicating that sub-millennial oceanographic variability was recorded by these microfossils. We document strong evidence of chemosynthetic trophic webs and sulfidic environments (from gastropod Alia permodesta and bivalve Lucinoma aequizonata), which characterized restricted intervals previously interpreted as well oxygenated (such as the Pre-Bølling Warming). Mollusc records indicate first-order trophic energetic shifts between detrital and chemosynthetically-fixed carbon. Molluscs associated with widely different physiological preferences occur here within single, decadal intervals of sediment, and as such mollusc assemblages may reflect significant inter-decadal oceanographic variability. Foraminifera assemblages provide exceptional records of the sequential, chronological progression of the deglacial climatic and oceanographic events, whereas mollusc assemblages reflect non-chronological similarities in reoccurring communities. Foraminifera taxa that drive community similarity here are also independently recognized as marker species for seafloor hypoxia regimes, which provides support for the idea that oxygenation change is a principal driver of seafloor environmental variability.

Late Pliocene paleoeco­logic reconstructions based on ostracode assemblages from the Sagavanirktok and Gubik formations, Alaskan North Slope

USGS Publications Warehouse

Brouwers, Elisabeth M.

1994-01-01

Shallow-marine ostracode assemblages from upper Pliocene sediments of the upper part of the Sagavanirktok Formation and lower part of the Gubik Formation record the last warm period that occurred before the onset of significant cooling of the Arctic Ocean and the initiation of Northern Hemisphere continental glaciation. The informally named Colvillian and Bigbendian transgressions represent the oldest deposits of the Gubik Formation and are dated, based on various lines of evidence, between 2.48 and 3 Ma. Ostracode faunas from the lower part of the Gubik Formation indicate a cold-temperate to subfrigid marine climate with summer bottom temperatures 1-4 C warmer than today. Deposits of the upper part of the Sagavanirktok Formation at Manning Point and Barter Island are older than Colvillian sediments but are believed to be late Pliocene in age and contain an ostracode fauna that has many species in common with the lower part of the Gubik Formation. The Sagavanirktok ostracode faunas indicate a cold-temperature to subfrigid marine climate, similar to that inferred for the lower part of the Gubik Formation, with summer bottom temperatures 1-3 C warmer than today. The opening of Bering Strait at about 3 Ma altered Arctic Ocean assemblage composition as Pacific species migrated into the Arctic and North Atlantic oceans. The admixture of evolutionarily distinct faunas from the Atlantic and Pacific oceans identifies Colvillian (and younger) faunas and provides a convenient reference horizon in the Alaskan fossil record. The marine climatic deterioration that followed the Bigbendian appears to have been abrupt and is documented by biotic turnover, with large numbers of species extinctions and first appearances of new species. The change in species composition can be attributed to the cooling of the Arctic Ocean during the late Pliocene.

Preliminary paleontologic report on cores 19A and 19B, from Russell Bank, Everglades National Park, Florida Bay

USGS Publications Warehouse

Brewster-Wingard, G. L.; Ishman, S.E.; Willard, D.A.; Edwards, L.E.; Holmes, C.W.

1997-01-01

The fauna and flora preserved in two cores, 19A and 19B, from the south side of Russell Bank (N 25 03.831', W 80 37.486') in north-central Florida Bay, Everglades National Park, Florida, record a history of environmental change over the last century. The benthic foraminifera and molluscs indicate fluctuating salinities with increasing average salinity upcore in core 19B. Shifts from low salinity (12-15 ppt) to higher average salinity (30 ppt) occurred at 70-66 cm and 24-18 cm in core 19B (approximately 1937-1940 and 1975-1980). The inverse, shifts from periods of higher average salinity to periods of lower salinity, occurred at 140 cm, 90 cm, and 42 cm (approximately 1880, 1921, and 1960). Significant changes in the molluscan fauna indicative of specific substrate types occur at 88 cm, 68 cm, and 22 cm. The lower portion of the core is dominated by a mixture of sediment and grass dwellers, the middle portion by sediment dwellers, and the upper portion of the core by grass and finally grass and algae dwellers. Changes occur in the floral assemblages in core 19A, but the significance of these changes is unclear. Three subtle shifts occur in the pollen assemblages indicating the onshore vegetation was responding to some environmental factor. Two peaks in dinocyst abundance occur in core 19A, but the composition of dinocyst assemblages remains relatively stable throughout the core. Correspondence between changes in salinity and onshore vegetation changes is consistent with results from previous cores. The pattern of increased salinity upcore is consistent with patterns seen in core T24 from the mouth of Taylor Creek and in core 6A from Bob Allen mudbank.

Spatial variations of community structures and methane cycling across a transect of Lei-Gong-Hou mud volcanoes in eastern Taiwan.

PubMed

Wang, Pei-Ling; Chiu, Yi-Ping; Cheng, Ting-Wen; Chang, Yung-Hsin; Tu, Wei-Xain; Lin, Li-Hung

2014-01-01

This study analyzed cored sediments retrieved from sites distributed across a transect of the Lei-Gong-Hou mud volcanoes in eastern Taiwan to uncover the spatial distributions of biogeochemical processes and community assemblages involved in methane cycling. The profiles of methane concentration and carbon isotopic composition revealed various orders of the predominance of specific methane-related metabolisms along depth. At a site proximal to the bubbling pool, the methanogenic zone was sandwiched by the anaerobic methanotrophic zones. For two sites distributed toward the topographic depression, the methanogenic zone overlaid the anaerobic methanotrophic zone. The predominance of anaerobic methanotrophy at specific depth intervals is supported by the enhanced copy numbers of the ANME-2a 16S rRNA gene and coincides with high dissolved Fe/Mn concentrations and copy numbers of the Desulfuromonas/Pelobacter 16S rRNA gene. Assemblages of 16S rRNA and mcrA genes revealed that methanogenesis was mediated by Methanococcoides and Methanosarcina. pmoA genes and a few 16S rRNA genes related to aerobic methanotrophs were detected in limited numbers of subsurface samples. While dissolved Fe/Mn signifies the presence of anaerobic metabolisms near the surface, the correlations between geochemical characteristics and gene abundances, and the absence of aerobic methanotrophs in top sediments suggest that anaerobic methanotrophy is potentially dependent on iron/manganese reduction and dominates over aerobic methanotrophy for the removal of methane produced in situ or from a deep source. Near-surface methanogenesis contributes to the methane emissions from mud platform. The alternating arrangements of methanogenic and methanotrophic zones at different sites suggest that the interactions between mud deposition, evaporation, oxidation and fluid transport modulate the assemblages of microbial communities and methane cycling in different compartments of terrestrial mud volcanoes.

Geographical variations in bacterial communities associated with soft coral Scleronephthya gracillimum.

PubMed

Woo, Seonock; Yang, Shan-Hua; Chen, Hsing-Ju; Tseng, Yu-Fang; Hwang, Sung-Jin; De Palmas, Stephane; Denis, Vianney; Imahara, Yukimitsu; Iwase, Fumihito; Yum, Seungshic; Tang, Sen-Lin

2017-01-01

Environmental impacts can alter relationships between a coral and its symbiotic microbial community. Furthermore, changes in the microbial community associated with increased seawater temperatures can cause opportunistic infections, coral disease and death. Interactions between soft corals and their associated microbes are not well understood. The species Scleronephthya gracillimum is distributed in tropical to temperate zones in coral assemblages along the Kuroshio Current region. In this study we collected S. gracillimum from various sites at different latitudes, and compared composition of their bacterial communities using Next Generation Sequencing. Coral samples from six geographically distinct areas (two sites each in Taiwan, Japan, and Korea) had considerable variation in their associated bacterial communities and diversity. Endozoicimonaceae was the dominant group in corals from Korea and Japan, whereas Mycoplasma was dominant in corals from Taiwan corals. Interestingly, the latter corals had lower relative abundance of Endozoicimonaceae, but greater diversity. These biogeographic differences in bacterial composition may have been due to varying environmental conditions among study locations, or because of host responses to prevailing environmental conditions. This study provided a baseline for future studies of soft coral microbiomes, and assessment of functions of host metabolites and soft coral holobionts.

Geographical variations in bacterial communities associated with soft coral Scleronephthya gracillimum

PubMed Central

Chen, Hsing-Ju; Tseng, Yu-Fang; Hwang, Sung-Jin; De Palmas, Stephane; Denis, Vianney; Imahara, Yukimitsu; Iwase, Fumihito; Yum, Seungshic; Tang, Sen-Lin

2017-01-01

Environmental impacts can alter relationships between a coral and its symbiotic microbial community. Furthermore, changes in the microbial community associated with increased seawater temperatures can cause opportunistic infections, coral disease and death. Interactions between soft corals and their associated microbes are not well understood. The species Scleronephthya gracillimum is distributed in tropical to temperate zones in coral assemblages along the Kuroshio Current region. In this study we collected S. gracillimum from various sites at different latitudes, and compared composition of their bacterial communities using Next Generation Sequencing. Coral samples from six geographically distinct areas (two sites each in Taiwan, Japan, and Korea) had considerable variation in their associated bacterial communities and diversity. Endozoicimonaceae was the dominant group in corals from Korea and Japan, whereas Mycoplasma was dominant in corals from Taiwan corals. Interestingly, the latter corals had lower relative abundance of Endozoicimonaceae, but greater diversity. These biogeographic differences in bacterial composition may have been due to varying environmental conditions among study locations, or because of host responses to prevailing environmental conditions. This study provided a baseline for future studies of soft coral microbiomes, and assessment of functions of host metabolites and soft coral holobionts. PMID:28859111