Contributions of microbial activity and ash deposition to post-fire nitrogen availability in a pine savanna

NASA Astrophysics Data System (ADS)

Ficken, Cari D.; Wright, Justin P.

2017-01-01

Many ecosystems experience drastic changes to soil nutrient availability associated with fire, but the magnitude and duration of these changes are highly variable among vegetation and fire types. In pyrogenic pine savannas across the southeastern United States, pulses of soil inorganic nitrogen (N) occur in tandem with ecosystem-scale nutrient losses from prescribed burns. Despite the importance of this management tool for restoring and maintaining fire-dependent plant communities, the contributions of different mechanisms underlying fire-associated changes to soil N availability remain unclear. Pulses of N availability following fire have been hypothesized to occur through (1) changes to microbial cycling rates and (2) direct ash deposition. Here, we document fire-associated changes to N availability across the growing season in a longleaf pine savanna in North Carolina. To differentiate between possible mechanisms driving soil N pulses, we measured net microbial cycling rates and changes to soil δ15N before and after a burn. Our findings refute both proposed mechanisms: we found no evidence for changes in microbial activity, and limited evidence that ash deposition could account for the increase in ammonium availability to more than 5-25 times background levels. Consequently, we propose a third mechanism to explain post-fire patterns of soil N availability, namely that (3) changes to plant sink strength may contribute to ephemeral increases in soil N availability, and encourage future studies to explicitly test this mechanism.

Effects of a holiday week on urban soil CO2 flux: an intensive study in Xiamen, southeastern China

NASA Astrophysics Data System (ADS)

Ye, H.; Wang, K.; Chen, F.

2012-12-01

To study the effects of a holiday period on urban soil CO2 flux, CO2 efflux from grassland soil in a traditional park in the city of Xiamen was measured hourly from 28th Sep to 11th Oct, a period that included China's National Day holiday week in 2009. The results of this study revealed that: a) The urban soil CO2 emissions were higher before and after the holiday week and lower during the National Day holiday reflecting changes in the traffic cycles; b) A diurnal cycle where the soil CO2 flux decreased from early morning to noon was associated with CO2 uptake by vegetation which strongly offset vehicle CO2 emissions. The soil CO2 flux increased from night to early morning, associated with reduced CO2 uptake by vegetation; c) During the National Day holiday week in 2009, lower rates of soil respiration were measured after Mid-Autumn Day than earlier in the week, and this was related to a reduced level of human activities and vehicle traffic, reducing the CO2 concentration in the air. Urban holidays have a clear effect on soil CO2 flux through the interactions between vehicle, visitor and vegetation CO2 emissions which indirectly control the use of carbon by plant roots, the rhizosphere and soil microorganisms. Consequently, appropriate traffic controls and tourism travel plans can have positive effects on the soil carbon store and may improve local air quality.

Biophysical processes supporting the diversity of microbial life in soil

PubMed Central

Tecon, Robin

2017-01-01

Abstract Soil, the living terrestrial skin of the Earth, plays a central role in supporting life and is home to an unimaginable diversity of microorganisms. This review explores key drivers for microbial life in soils under different climates and land-use practices at scales ranging from soil pores to landscapes. We delineate special features of soil as a microbial habitat (focusing on bacteria) and the consequences for microbial communities. This review covers recent modeling advances that link soil physical processes with microbial life (termed biophysical processes). Readers are introduced to concepts governing water organization in soil pores and associated transport properties and microbial dispersion ranges often determined by the spatial organization of a highly dynamic soil aqueous phase. The narrow hydrological windows of wetting and aqueous phase connectedness are crucial for resource distribution and longer range transport of microorganisms. Feedbacks between microbial activity and their immediate environment are responsible for emergence and stabilization of soil structure—the scaffolding for soil ecological functioning. We synthesize insights from historical and contemporary studies to provide an outlook for the challenges and opportunities for developing a quantitative ecological framework to delineate and predict the microbial component of soil functioning. PMID:28961933

Long term consequences of a controlled slash burn and slash mastication to soil moisture and CO2 at a southern Colorado site

Treesearch

W. J. Massman; J. M. Frank; A. E. Jimenez Esquilin; M. E. Stromberger; W. D. Shepperd

2006-01-01

Thinning of forest stands is frequently used to reduce the risk of catastrophic fire. But thinning requires that the refuse (or slash) be removed from the site, which can be done either by burning it or by mastication and dispersal. Either method has long term consequences to the soil and to soil moisture and soil CO2 levels. For example, after the initial drying of...

The effects of the urban built environment on the spatial distribution of lead in residential soils.

PubMed

Schwarz, K; Pickett, Steward T A; Lathrop, Richard G; Weathers, Kathleen C; Pouyat, Richard V; Cadenasso, Mary L

2012-04-01

Lead contamination of urban residential soils is a public health concern. Consequently, there is a need to delineate hotspots in the landscape to identify risk and facilitate remediation. Land use is a good predictor of some environmental pollutants. However, in the case of soil lead, research has shown that land use is not a useful proxy. We hypothesize that soil lead is related to both individual landscape features at the parcel scale and the landscape context in which parcels are embedded. We sampled soil lead on 61 residential parcels in Baltimore, Maryland using field-portable x-ray fluorescence. Thirty percent of parcels had average lead concentrations that exceeded the USEPA limit of 400 ppm and 53% had at least one reading that exceeded 400 ppm. Results indicate that soil lead is strongly associated with housing age, distance to roadways, and on a parcel scale, distance to built structures. Copyright © 2011 Elsevier Ltd. All rights reserved.

The relative abundance of predicted genes associated with ammonia-oxidation, nitrate reduction, and biomass decomposition in mineral soil are altered by intensive timber harvest.

NASA Astrophysics Data System (ADS)

Mushinski, R. M.; Zhou, Y.; Gentry, T. J.; Boutton, T. W.

2017-12-01

Forest ecosystems in the southern United States are substantially altered by anthropogenic disturbances such as timber harvest and land conversion, with effects being observed in carbon and nutrient pools as well as biogeochemical processes. Furthermore, the desire to develop renewable energy sources in the form of biomass extraction from logging residues may result in alterations in soil community structure and function. While the impact of forest management on soil physicochemical properties of the region has been studied, its' long-term effect on soil bacterial community composition and metagenomic potential is relatively unknown, especially at deeper soil depths. This study investigates how intensive organic matter removal intensities associated with timber harvest influence decadal-scale alterations in bacterial community structure and functional potential in the upper 1-m of the soil profile, 18 years post-harvest in a Pinus taeda L. forest of eastern Texas. Amplicon sequencing of the 16S rRNA gene was used in conjunction with soil chemical analyses to evaluate treatment-induced differences in community composition and potential environmental drivers of associated change. Furthermore, functional potential was assessed by using amplicon data to make metagenomic predictions. Results indicate that increasing organic matter removal intensity leads to altered community composition and the relative abundance of dominant OTUs annotated to Burkholderia and Aciditerrimonas. The relative abundance of predicted genes associated with dissimilatory nitrate reduction and denitrification were highest in the most intensively harvested treatment while genes involved in nitrification were significantly lower in the most intensively harvested treatment. Furthermore, genes associated with glycosyltransferases were significantly reduced with increasing harvest intensity while polysaccharide lyases increased. These results imply that intensive organic matter removal may create long-term alterations in bacterial community structure with concurrent alterations to mineral soil carbon and nutrient cycling which may have future consequences on forest regeneration and subsequent stand productivity.

Expeditionary Readiness Training (ExpeRT) Course Expansion Final Environmental Assessment Creech Air Force Base

DTIC Science & Technology

2006-07-01

potential environmental consequences of the proposed action and no-action alternative and are addressed for: air quality, soils and water resources...evaluated in detail to identify potential environmental consequences: air quality; soils and water resources; biological resources; and cultural resources...significance. Therefore, this proposed action would not constitute a significant impact and would conform to regional standards. Soils and Water Resources

Soil erosion and associated organic carbon transfer along the southern Amazon land use frontier - status quo and future scenarios

NASA Astrophysics Data System (ADS)

Schindewolf, Marcus; Herrmann, Anne-Kathrin; Herrmann, Marie-Kristin; Amorim, Ricardo S. S.; Schmidt, Jürgen

2016-04-01

The Southern Amazon deforestation arc is one of the world's most dynamically changing landscapes mainly caused by global demands on animal products. Already more than 50 % of the savanna vegetation in Mato Grosso is converted to agricultural land. Following the BR-163 highway to the north deforestation is continuing, where former tropical rainforest is converted to pastures. Consequences are expected to be negative and highly relevant concerning soil functions. Soil losses and related carbon transfer by water erosion are likely to occur on a larger scale. Within the Carbiocial project, the impact of land use changes on soil loss was measured by applying artificial rainfall simulations. Experimental results were used to parameterize the physical based EROSION 3D simulation model in two meso-scale watersheds. The impact of future land use and climate scenarios on soil erosion and particle bound organic carbon transfer were simulated in addition to present day effects. Our results allow different predictions: Land use changes from natural vegetation to pasture lead to increased surface runoffs and soil losses. Due to the predominant no-tillage management, croplands do not reveal a similar behaviour; runoff and sediment yields are close to the initial level. Particle bound organic carbon losses are negligible compared to the removal of biomass during deforestation. Compared to the land use change effect more significant differences appear concerning the predominant soil types of the study region. Deterioration of soil functions are less pronounced for Ferralsols with a stable microstructure than for Acrisols. Additionally, our data suggest, that the main soil losses are related to the narrow time windows of land use conversion. Consequently, intensifying production on existing agricultural land rather than creating new production area (deforestation) might be the most practical way of preserving soils of the Southern Amazon.

Factors controlling soil organic carbon stability along a temperate forest altitudinal gradient

PubMed Central

Tian, Qiuxiang; He, Hongbo; Cheng, Weixin; Bai, Zhen; Wang, Yang; Zhang, Xudong

2016-01-01

Changes in soil organic carbon (SOC) stability may alter carbon release from the soil and, consequently, atmospheric CO2 concentration. The mean annual temperature (MAT) can change the soil physico-chemical characteristics and alter the quality and quantity of litter input into the soil that regulate SOC stability. However, the relationship between climate and SOC stability remains unclear. A 500-day incubation experiment was carried out on soils from an 11 °C-gradient mountainous system on Changbai Mountain in northeast China. Soil respiration during the incubation fitted well to a three-pool (labile, intermediate and stable) SOC decomposition model. A correlation analysis revealed that the MAT only influenced the labile carbon pool size and not the SOC stability. The intermediate carbon pool contributed dominantly to cumulative carbon release. The size of the intermediate pool was strongly related to the percentage of sand particle. The decomposition rate of the intermediate pool was negatively related to soil nitrogen availability. Because both soil texture and nitrogen availability are temperature independent, the stability of SOC was not associated with the MAT, but was heavily influenced by the intrinsic processes of SOC formation and the nutrient status. PMID:26733344

Study of recent changes of weathering dynamic in soils based on Sr and U isotope ratios in soil solutions (Strengbach catchment- Vosges, France)

NASA Astrophysics Data System (ADS)

Prunier, Jonathan; Chabaux, François; Stille, Peter; Pierret, Marie-Claire; Viville, Daniel; Gangloff, Sophie

2015-04-01

Major and trace element concentrations along with U and Sr isotopic ratios of the main components of the water-soil-plant system of two experimental plots in a forested silicate catchment were determined to characterize the day-present weathering processes within the surface soil levels and to identify the nature of minerals which control the lithogenic flux of the soil solutions. This study allows recognition of a lithogenic origin of the dissolved U in the surface soil solutions, even in the most superficial ones, implying that the colloidal U is a U secondarily associated with organic matter or organo-metallic complexes. This flux significantly varies in the upper meter of the soil and between the two sites, due to their slightly different bedrock lithologies and likely also to their different vegetation covers. A long-time monitoring during the past 15 years was achieved to evaluate the response of this ecosystem to recent environmental changes. A clear decrease of the Ca and K fluxes exported by the soil solutions between 1992 and 2006 at the spruce site was observed, while this decrease is much smaller for the beech plot. In addition, the Sr isotope ratios of soil solutions vary significantly between 1998 and 2004, with once again a much more important change for the spruce site than for the beech site. It demonstrates that the source of elements in soil solutions has changed over this time period due to a modification of the weathering reactions occurring within the weathering profile. The origin of the weathering modification could be the consequence of the acid rains on weathering granitic bedrock or a consequence of forest exploitation incompatible with the nutriment reserve of soils with recent plantations of conifer, which impoverish soils. All together, these data suggest that the forest ecosystem at the spruce plot is in a transient state of functioning marked by a possible recent modification of weathering reactions. This study shows the potential of the approach combining the analysis of U and Sr isotopes in soil solutions and vegetation to evaluate this kind of phenomenon.

Impact of Amendments on the Physical Properties of Soil under Tropical Long-Term No Till Conditions.

PubMed

Carmeis Filho, Antonio C A; Crusciol, Carlos A C; Guimarães, Tiara M; Calonego, Juliano C; Mooney, Sacha J

2016-01-01

Tropical regions have been considered the world's primary agricultural frontier; however, some physico-chemical deficiencies, such as low soil organic matter content, poor soil structure, high erodibility, soil acidity, and aluminum toxicity, have affected their productive capacity. Lime and gypsum are commonly used to improve soil chemical fertility, but no information exists about the long-term effects of these products on the physical attributes and C protection mechanisms of highly weathered Oxisols. A field trial was conducted in a sandy clay loam (kaolinitic, thermic Typic Haplorthox) under a no-tillage system for 12 years. The trial consisted of four treatments: a control with no soil amendment application, the application of 2.1 Mg ha-1 phosphogypsum, the application of 2.0 Mg ha-1 lime, and the application of lime + phosphogypsum (2.0 + 2.1 Mg ha-1, respectively). Since the experiment was established in 2002, the rates have been applied three times (2002, 2004, and 2010). Surface liming effectively increased water-stable aggregates > 2.0 mm at a depth of up to 0.2 m; however, the association with phosphogypsum was considered a good strategy to improve the macroaggregate stability in subsoil layers (0.20 to 0.40 m). Consequently, both soil amendments applied together increased the mean weight diameter (MWD) and geometric mean diameter (GMD) in all soil layers, with increases of up to 118 and 89%, respectively, according to the soil layer. The formation and stabilization of larger aggregates contributed to a higher accumulation of total organic carbon (TOC) on these structures. In addition to TOC, the MWD and aggregate stability index were positively correlated with Ca2+ and Mg2+ levels and base saturation. Consequently, the increase observed in the aggregate size class resulted in a better organization of soil particles, increasing the macroporosity and reducing the soil bulk density and penetration resistance. Therefore, adequate soil chemical management plays a fundamental role in improving the soil's physical attributes in tropical areas under conservative management and highly affected by compaction caused by intensive farming.

The Consequences of Precipitation Seasonality for Mediterranean-Ecosystem Vegetation of South Africa.

PubMed

Cramer, Michael D; Hoffman, M Timm

2015-01-01

Globally, mediterranean-climate ecosystem vegetation has converged on an evergreen, sclerophyllous and shrubby growth form. The particular aspects of mediterranean-climate regions that contribute to this convergence include summer droughts and relatively nutrient-poor soils. We hypothesised that winter-precipitation implies stressful summer droughts and leaches soils due to greater water availability (i.e. balance between precipitation and potential evapotranspiration; P-PET) during cold periods. We conducted a comparative analysis of normalised difference vegetation indices (NDVI) and edaphic and climate properties across the biomes of South Africa. NDVI was strongly correlated with both precipitation and P-PET (r2 = 0.8). There was no evidence, however, that winter-precipitation reduces NDVI in comparison to similar amounts of summer-precipitation. Base saturation (BS), a measure of soil leaching was, however, negatively related to P-PET (r2 = 0.64). This led to an interaction between P-PET and BS in determining NDVI, indicating the existence of a trade-off between water availability and soil nutrients that enables NDVI to increase with precipitation, despite negative consequences for soil nutrient availability. The mechanism of this trade-off is suggested to be that water increases nutrient accessibility. This implies that along with nutrient-depauperate geologies and long periods of time since glaciation, the winter-precipitation may have contributed to the highly leached status of the soils. Since many of the ecophysiological characteristics of mediterranean-ecosystem flora are associated with low nutrient availabilities (e.g. evergreen foliage, sclerophylly, cluster roots), we conclude that mediterranean-climates promote convergence of growth-forms in these regions through high leaching capacity.

The Consequences of Precipitation Seasonality for Mediterranean-Ecosystem Vegetation of South Africa

PubMed Central

2015-01-01

Globally, mediterranean-climate ecosystem vegetation has converged on an evergreen, sclerophyllous and shrubby growth form. The particular aspects of mediterranean-climate regions that contribute to this convergence include summer droughts and relatively nutrient-poor soils. We hypothesised that winter-precipitation implies stressful summer droughts and leaches soils due to greater water availability (i.e. balance between precipitation and potential evapotranspiration; P–PET) during cold periods. We conducted a comparative analysis of normalised difference vegetation indices (NDVI) and edaphic and climate properties across the biomes of South Africa. NDVI was strongly correlated with both precipitation and P–PET (r2 = 0.8). There was no evidence, however, that winter-precipitation reduces NDVI in comparison to similar amounts of summer-precipitation. Base saturation (BS), a measure of soil leaching was, however, negatively related to P–PET (r2 = 0.64). This led to an interaction between P–PET and BS in determining NDVI, indicating the existence of a trade-off between water availability and soil nutrients that enables NDVI to increase with precipitation, despite negative consequences for soil nutrient availability. The mechanism of this trade-off is suggested to be that water increases nutrient accessibility. This implies that along with nutrient-depauperate geologies and long periods of time since glaciation, the winter-precipitation may have contributed to the highly leached status of the soils. Since many of the ecophysiological characteristics of mediterranean-ecosystem flora are associated with low nutrient availabilities (e.g. evergreen foliage, sclerophylly, cluster roots), we conclude that mediterranean-climates promote convergence of growth-forms in these regions through high leaching capacity. PMID:26650081

Vegetation associations

Treesearch

W. F. Mueggler

1985-01-01

Aspen trees grow along moist stream bottoms as well as on dry ridges and southerly exposures, on talus slopes, and on shallow to deep soils of varied origins. Quaking aspen is one of the few plant species that can grow in all mountain vegetational zones from the alpine to the basal plain (Daubenmire 1943). As a consequence, aspen dominated communities are found...

Fuels planning: science synthesis and integration; environmental consequences fact sheet 08: Evaluating sedimentation risks associated with fuel management

Treesearch

William Elliot; Pete Robichaud

2005-01-01

This fact sheet describes the sources of sediment in upland forest watersheds in the context of fuel management activities. It presents the dominant forest soil erosion processes, and the principles behind the new sediment delivery interface developed to aid in erosion analysis of fuel management projects.

The distribution of microplastics in soil aggregate fractions in southwestern China.

PubMed

Zhang, G S; Liu, Y F

2018-06-09

Plastic particle accumulation in arable soils is a growing contaminant of concern with unknown consequences for soil productivity and quality. This study aimed to investigate abundance and distribution of plastic particles among soil aggregate fractions in four cropped areas and an established riparian forest buffer zone at Dian Lake, southwestern China. Plastic particles (10-0.05 mm) from fifty soil samples were extracted and then sorted by size, counted, and categorized. Plastic particles were found in all soil samples. The concentration of plastic particles ranges from 7100 to 42,960 particles kg -1 (mean 18,760 particles kg -1 ). 95% of the sampled plastic particles are in the microplastic size (1-0.05 mm) range. The predominant form is plastic fibers, making up on average 92% of each sample followed by fragments and films that contributed with to 8%. Results of this study also show that 72% of plastic particles are associated with soil aggregates, and 28% of plastic particles are dispersed. The abundance of aggregate-associated plastic fibers is significantly greater in the micro-aggregate than that in the macro-aggregate, whereas the less concentrations of plastic films and fragments are found in the micro-aggregate. Compared to the adjacent vegetable soil, the less concentration of plastic particles in the buffer soil implicates that application of soil amendments and irrigation with wastewater must be controlled to reduce accumulation of microplastics in agricultural soils. While the implications of microplastic on ecological and human health are poorly understood, the staggering number of microplastic in agricultural soils should be continually concerned in the future. Copyright © 2018 Elsevier B.V. All rights reserved.

Soil contamination with cadmium, consequences and remediation using organic amendments.

PubMed

Khan, Muhammad Amjad; Khan, Sardar; Khan, Anwarzeb; Alam, Mehboob

2017-12-01

Cadmium (Cd) contamination of soil and food crops is a ubiquitous environmental problem that has resulted from uncontrolled industrialization, unsustainable urbanization and intensive agricultural practices. Being a toxic element, Cd poses high threats to soil quality, food safety, and human health. Land is the ultimate source of waste disposal and utilization therefore, Cd released from different sources (natural and anthropogenic), eventually reaches soil, and then subsequently bio-accumulates in food crops. The stabilization of Cd in contaminated soil using organic amendments is an environmentally friendly and cost effective technique used for remediation of moderate to high contaminated soil. Globally, substantial amounts of organic waste are generated every day that can be used as a source of nutrients, and also as conditioners to improve soil quality. This review paper focuses on the sources, generation, and use of different organic amendments to remediate Cd contaminated soil, discusses their effects on soil physical and chemical properties, Cd bioavailability, plant uptake, and human health risk. Moreover, it also provides an update of the most relevant findings about the application of organic amendments to remediate Cd contaminated soil and associated mechanisms. Finally, future research needs and directions for the remediation of Cd contaminated soil using organic amendments are discussed. Copyright © 2017 Elsevier B.V. All rights reserved.

Impact of Amendments on the Physical Properties of Soil under Tropical Long-Term No Till Conditions

PubMed Central

Mooney, Sacha J.

2016-01-01

Tropical regions have been considered the world’s primary agricultural frontier; however, some physico-chemical deficiencies, such as low soil organic matter content, poor soil structure, high erodibility, soil acidity, and aluminum toxicity, have affected their productive capacity. Lime and gypsum are commonly used to improve soil chemical fertility, but no information exists about the long-term effects of these products on the physical attributes and C protection mechanisms of highly weathered Oxisols. A field trial was conducted in a sandy clay loam (kaolinitic, thermic Typic Haplorthox) under a no-tillage system for 12 years. The trial consisted of four treatments: a control with no soil amendment application, the application of 2.1 Mg ha-1 phosphogypsum, the application of 2.0 Mg ha-1 lime, and the application of lime + phosphogypsum (2.0 + 2.1 Mg ha-1, respectively). Since the experiment was established in 2002, the rates have been applied three times (2002, 2004, and 2010). Surface liming effectively increased water-stable aggregates > 2.0 mm at a depth of up to 0.2 m; however, the association with phosphogypsum was considered a good strategy to improve the macroaggregate stability in subsoil layers (0.20 to 0.40 m). Consequently, both soil amendments applied together increased the mean weight diameter (MWD) and geometric mean diameter (GMD) in all soil layers, with increases of up to 118 and 89%, respectively, according to the soil layer. The formation and stabilization of larger aggregates contributed to a higher accumulation of total organic carbon (TOC) on these structures. In addition to TOC, the MWD and aggregate stability index were positively correlated with Ca2+ and Mg2+ levels and base saturation. Consequently, the increase observed in the aggregate size class resulted in a better organization of soil particles, increasing the macroporosity and reducing the soil bulk density and penetration resistance. Therefore, adequate soil chemical management plays a fundamental role in improving the soil’s physical attributes in tropical areas under conservative management and highly affected by compaction caused by intensive farming. PMID:27959897

Process based modelling of soil organic carbon redistribution on landscape scale

NASA Astrophysics Data System (ADS)

Schindewolf, Marcus; Seher, Wiebke; Amorim, Amorim S. S.; Maeso, Daniel L.; Jürgen, Schmidt

2014-05-01

Recent studies have pointed out the great importance of erosion processes in global carbon cycling. Continuous erosion leads to a massive loss of top soils including the loss of organic carbon accumulated over long time in the soil humus fraction. Lal (2003) estimates that 20% of the organic carbon eroded with top soils is emitted into atmosphere, due to aggregate breakdown and carbon mineralization during transport by surface runoff. Furthermore soil erosion causes a progressive decrease of natural soil fertility, since cation exchange capacity is associated with organic colloids. As a consequence the ability of soils to accumulate organic carbon is reduced proportionately to the drop in soil productivity. The colluvial organic carbon might be protected from further degradation depending on the depth of the colluvial cover and local decomposing conditions. Some colluvial sites can act as long-term sinks for organic carbon. The erosional transport of organic carbon may have an effect on the global carbon budget, however, it is uncertain, whether erosion is a sink or a source for carbon in the atmosphere. Another part of eroded soils and organic carbon will enter surface water bodies and might be transported over long distances. These sediments might be deposited in the riparian zones of river networks. Erosional losses of organic carbon will not pass over into atmosphere for the most part. But soil erosion limits substantially the potential of soils to sequester atmospheric CO2 by generating humus. The present study refers to lateral carbon flux modelling on landscape scale using the process based EROSION 3D soil loss simulation model, using existing parameter values. The selective nature of soil erosion results in a preferentially transport of fine particles while less carbonic larger particles remain on site. Consequently organic carbon is enriched in the eroded sediment compared to the origin soil. For this reason it is essential that EROSION 3D provides the grain size distribution (clay, silt and sand) of the transported sediment. A test slope is modeled covering certain land use and soil management scenarios referring to different rainfall events. Results allow first insights on carbon loss and depletion on sediment delivery areas as well as carbon gains and enrichments on deposition areas on landscape scale. Lal, R. (2003). Soil erosion and the global carbon budget. Environment International vol. 29: 437-450.

Influence of soil γ-irradiation and spiking on sorption of p,p'-DDE and soil organic matter chemistry.

PubMed

Škulcová, Lucia; Scherr, Kerstin E; Chrást, Lukáš; Hofman, Jakub; Bielská, Lucie

2018-07-15

The fate of organic chemicals and their metabolites in soils is often investigated in model matrices having undergone various pre-treatment steps that may qualitatively or quantitatively interfere with the results. Presently, effects associated with soil sterilization by γ-irradiation and soil spiking using an organic solvent were studied in one freshly spiked soil (sterilization prior to contamination) and its field-contaminated (sterilization after contamination) counterpart for the model organic compound 1,1-Dichloro-2,2-bis(4-chlorophenyl)ethene (p,p'-DDE). Changes in the sorption and potential bioavailability of spiked and native p,p'-DDE were measured by supercritical fluid extraction (SFE), XAD-assisted extraction (XAD), and solid-phase microextraction (SPME) and linked to qualitative changes in soil organic matter (SOM) chemistry measured by diffuse reflectance infrared Fourier-transform (DRIFT) spectroscopy. Reduced sorption of p,p´-DDE detected with XAD and SPME was associated more clearly with spiking than with sterilization, but SFE showed a negligible impact. Spiking resulted in an increase of the DRIFT-derived hydrophobicity index, but irradiation did not. Spectral peak height ratio descriptors indicated increasing hydrophobicity and hydrophilicity in pristine soil following sterilization, and a greater reduction of hydrophobic over hydrophilic groups as a consequence of spiking. In parallel, reduced sorption of p,p´-DDE upon spiking was observed. Based on the present samples, γ-irradiation appears to alter soil sorptive properties to a lesser extent when compared to common laboratory processes such as spiking with organic solvents. Copyright © 2018. Published by Elsevier Inc.

Divergent taxonomic and functional responses of microbial communities to field simulation of aeolian soil erosion and deposition.

PubMed

Ma, Xingyu; Zhao, Cancan; Gao, Ying; Liu, Bin; Wang, Tengxu; Yuan, Tong; Hale, Lauren; Nostrand, Joy D Van; Wan, Shiqiang; Zhou, Jizhong; Yang, Yunfeng

2017-08-01

Aeolian soil erosion and deposition have worldwide impacts on agriculture, air quality and public health. However, ecosystem responses to soil erosion and deposition remain largely unclear in regard to microorganisms, which are the crucial drivers of biogeochemical cycles. Using integrated metagenomics technologies, we analysed microbial communities subjected to simulated soil erosion and deposition in a semiarid grassland of Inner Mongolia, China. As expected, soil total organic carbon and plant coverage were decreased by soil erosion, and soil dissolved organic carbon (DOC) was increased by soil deposition, demonstrating that field simulation was reliable. Soil microbial communities were altered (p < .039) by both soil erosion and deposition, with dramatic increase in Cyanobacteria related to increased stability in soil aggregates. amyA genes encoding α-amylases were specifically increased (p = .01) by soil deposition and positively correlated (p = .02) to DOC, which likely explained changes in DOC. Surprisingly, most of microbial functional genes associated with carbon, nitrogen, phosphorus and potassium cycling were decreased or unaltered by both erosion and deposition, probably arising from acceleration of organic matter mineralization. These divergent responses support the necessity to include microbial components in evaluating ecological consequences. Furthermore, Mantel tests showed strong, significant correlations between soil nutrients and functional structure but not taxonomic structure, demonstrating close relevance of microbial function traits to nutrient cycling. © 2017 John Wiley & Sons Ltd.

Soils are sensitive reactors - do we need a paradigm change towards a more sustainable soil use?

NASA Astrophysics Data System (ADS)

Horn, Rainer; Holthusen, Dörthe

2015-04-01

The aim of the lecture is to clarify the effect of soil management and the consequences of physical degradation on processes like soil aggregation and changes in the accessibility and functionality of structured soils. If due to soil management strategies the internal soil strength will be exceeded by external stresses applied not only the available pore space is reduced while the solid mass is increased but especially the pore continuity and the accessibility of exchange places for nutrients or heavy metals are altered. In addition, the root distribution in soils becomes not only reduced but also unevenly distributed which again hinders the possibility to evenly uptake plant available water and nutrient out of the pores. The applied stresses also create an anisotropic arrangement of the pores and their functions and also result in a more pronounced lateral mass transport by surface runoff including soil erosion by water and wind. Thus, also the water balance on all scales (from the pedon to the catchment) shows an increased water loss by evaporation and surface water while the groundwater recharge and the transpiration rates are reduced. If we analyze the scale dependency of nutrient adsorption and desorption phenomena it has to be stated, that the accessibility of exchange places within soil aggregates are the better the more structured and the more rigid these aggregates are, while with increasing mechanical stress applied aggregates are deformed and as a consequences they become less porous with a severe differentiation between the outer and the inner part of the aggregate volume. On the bulk soil scale, we can analyze the platy structure as a visible hint for anthropogenic soil degradation which affects amongst others also the ion exchange processes. Furthermore an uneven aeration within such degraded soils results in a very pronounced anoxia on all scales (from the aggregate to the hectare scale) which can be quantified not only by corresponding measurements of the spatial distribution of redox potential values. In recent studies under "normal" wheeling conditions in arable fields and also in harvested forest sites it was proofed that Eh values close to 0 mV or even a methane emission have to be expected (with consequences for the global warming). Finally anoxic conditions also affect the redox induced mobilization of Fe and Mn which even results in a more rapid soil development with consequences also for yield and further soil functions. Consequently a shift to a more sustainable landuse or soil management strategy is urgently requested in order to prevent a further soil degradation. The scenario of peak soil must and can be prevented by a more site specific soil management. In the lecture, these effects will be discussed as well as a soil protection guide line (based on the German soil protection law) will be presented in order to prevent further irreversible soil degradation phenomena. Keywords: mechanical strength, mechanical stress and strain effects soil degradation, pore functions, ad-/desorption processes, redox potential, anoxia;, global change

Mortality and community changes drive sudden oak death impacts on litterfall and soil nitrogen cycling.

PubMed

Cobb, Richard C; Eviner, Valerie T; Rizzo, David M

2013-10-01

Few studies have quantified pathogen impacts to ecosystem processes, despite the fact that pathogens cause or contribute to regional-scale tree mortality. We measured litterfall mass, litterfall chemistry, and soil nitrogen (N) cycling associated with multiple hosts along a gradient of mortality caused by Phytophthora ramorum, the cause of sudden oak death. In redwood forests, the epidemiological and ecological characteristics of the major overstory species determine disease patterns and the magnitude and nature of ecosystem change. Bay laurel (Umbellularia californica) has high litterfall N (0.992%), greater soil extractable NO3 -N, and transmits infection without suffering mortality. Tanoak (Notholithocarpus densiflorus) has moderate litterfall N (0.723%) and transmits infection while suffering extensive mortality that leads to higher extractable soil NO3 -N. Redwood (Sequoia sempervirens) has relatively low litterfall N (0.519%), does not suffer mortality or transmit the pathogen, but dominates forest biomass. The strongest impact of pathogen-caused mortality was the potential shift in species composition, which will alter litterfall chemistry, patterns and dynamics of litterfall mass, and increase soil NO3 -N availability. Patterns of P. ramorum spread and consequent mortality are closely associated with bay laurel abundances, suggesting this species will drive both disease emergence and subsequent ecosystem function. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Climate-driven reduction in soil loss due to the dynamic role of vegetation

NASA Astrophysics Data System (ADS)

Constantine, J. A.; Ciampalini, R.; Walker-Springett, K.; Hales, T. C.; Ormerod, S.; Gabet, E. J.; Hall, I. R.

2016-12-01

Simulations of 21st century climate change predict increases in seasonal precipitation that may lead to widespread soil loss and reduced soil carbon stores by increasing the likelihood of surface runoff. Vegetation may counteract this increase through its dynamic response to climate change, possibly mitigating any impact on soil erosion. Here, we document for the first time the potential for vegetation to prevent widespread soil loss by surface-runoff mechanisms (i.e., rill and inter-rill erosion) by implementing a process-based soil erosion model across catchments of Great Britain with varying land-cover, topographic, and soil characteristics. Our model results reveal that, even under a significantly wetter climate, warmer air temperatures can limit soil erosion across areas with permanent vegetation cover because of its role in enhancing primary productivity, which improves leaf interception, soil infiltration-capacity, and the erosive resistance of soil. Consequently, any increase in air temperature associated with climate change will increase the threshold change in rainfall required to accelerate soil loss, and rates of soil erosion could therefore decline by up to 50% from 2070-2099 compared to baseline values under the IPCC-defined medium-emissions scenario SRES A1B. We conclude that enhanced primary productivity due to climate change can introduce a negative-feedback mechanism that limits soil loss by surface runoff as vegetation-induced impacts on soil hydrology and erodibility offset precipitation increases, highlighting the need to expand areas of permanent vegetation cover to reduce the potential for climate-driven soil loss.

Genotype and plant trait effects on soil CO2 efflux responses to altered precipitation in switchgrass

USDA-ARS?s Scientific Manuscript database

Background/Question/Methods Global climate change models predict increasing drought during the growing season, which will alter many ecosystem processes including soil CO2 efflux (JCO2), with potential consequences for carbon retention in soils. Soil moisture, soil temperature and plant traits such...

Quantifying soil respiration at landscape scales. Chapter 11

Treesearch

John B. Bradford; Michael G. Ryan

2008-01-01

Soil CO2, efflux, or soil respiration, represents a substantial component of carbon cycling in terrestrial ecosystems. Consequently, quantifying soil respiration over large areas and long time periods is an increasingly important goal. However, soil respiration rates vary dramatically in space and time in response to both environmental conditions...

Can Microbial Ecology and Mycorrhizal Functioning Inform Climate Change Models?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hofmockel, Kirsten; Hobbie, Erik

Our funded research focused on soil organic matter dynamics and plant-microbe interactions by examining the role of belowground processes and mechanisms across scales, including decomposition of organic molecules, microbial interactions, and plant-microbe interactions associated with a changing climate. Research foci included mycorrhizal mediated priming of soil carbon turnover, organic N use and depolymerization by free-living microbes and mycorrhizal fungi, and the use of isotopes as additional constraints for improved modeling of belowground processes. This work complemented the DOE’s mandate to understand both the consequences of atmospheric and climatic change for key ecosystems and the feedbacks on C cycling.

Metal-based nanoparticles in soil: fate, behavior, and effects on soil invertebrates.

PubMed

Tourinho, Paula S; van Gestel, Cornelis A M; Lofts, Stephen; Svendsen, Claus; Soares, Amadeu M V M; Loureiro, Susana

2012-08-01

Metal-based nanoparticles (NPs) (e.g., silver, zinc oxide, titanium dioxide, iron oxide) are being widely used in the nanotechnology industry. Because of the release of particles from NP-containing products, it is likely that NPs will enter the soil compartment, especially through land application of sewage sludge derived from wastewater treatment. This review presents an overview of the literature dealing with the fate and effects of metal-based NPs in soil. In the environment, the characteristics of NPs (e.g., size, shape, surface charge) and soil (e.g., pH, ionic strength, organic matter, and clay content) will affect physical and chemical processes, resulting in NP dissolution, agglomeration, and aggregation. The behavior of NPs in soil will control their mobility and their bioavailability to soil organisms. Consequently, exposure characterization in ecotoxicological studies should obtain as much information as possible about dissolution, agglomeration, and aggregation processes. Comparing existing studies is a challenging task, because no standards exist for toxicity tests with NPs. In many cases, the reporting of associated characterization data is sparse, or missing, making it impossible to interpret and explain observed differences in results among studies. Copyright © 2012 SETAC.

Sensitivity of greenhouse summer dryness to changes in plant rooting characteristics

USGS Publications Warehouse

Milly, P.C.D.

1997-01-01

A possible consequence of increased concentrations of greenhouse gases in Earth's atmosphere is "summer dryness," a decrease of summer plant-available soil water in middle latitudes, caused by increased availability of energy to drive evapotranspiration. Results from a numerical climate model indicate that summer dryness and related changes of land-surface water balances are highly sensitive to possible concomitant changes of plant-available water-holding capacity of soil, which depends on plant rooting depth and density. The model suggests that a 14% decrease of the soil volume whose water is accessible to plant roots would generate the same summer dryness, by one measure, as an equilibrium doubling of atmospheric carbon dioxide. Conversely, a 14% increase of that soil volume would be sufficient to offset the summer dryness associated with carbon-dioxide doubling. Global and regional changes in rooting depth and density may result from (1) plant and plant-community responses to greenhouse warming, to carbon-dioxide fertilization, and to associated changes in the water balance and (2) anthropogenic deforestation and desertification. Given their apparently critical role, heretofore ignored, in global hydroclimatic change, such changes of rooting characteristics should be carefully evaluated using ecosystem observations, theory, and models.

On quantifying active soil carbon using mid-infrared ...

EPA Pesticide Factsheets

Soil organic matter (SOM) is derived from plant or animal residues deposited to soil and is in various stages of decomposition and mineralization. Total SOM is a common measure of soil quality, although due to its heterogeneous composition SOM can vary dramatically in terms of its biochemical properties and residence times, which ultimately affect soil heath and function. One operationally defined SOM fraction is “active soil carbon” (ASC) which is thought to consist of readily oxidizable SOM that is responsive to management practices and may provide one measure of “soil health” closely associated with soil biological activity. ASC can be a useful indicator to assist farmers and land managers in their selection of soil management practices to maintain ASC or to build total SOM. ASC has generally been measured using permanganate oxidation, a costly and time-intensive procedure. Chemometric modeling using mid-infrared spectroscopy (MIR) has been successfully used to estimate a range of soil properties, including total organic carbon (TOC) and particulate organic carbon (POC). Consequently, we hypothesized that we could use MIR to estimate ASC. Here we report on a method that uses MIR and chemometric signal processing to quantify TOC and ASC on a variety of soils collected serially and seasonally from a maximum of 76 locations across the United States. TOC was measured using high temperature oxidation and ASC was measured as permanganate-oxidizabl

Consequences of using different soil texture determination methodologies for soil physical quality and unsaturated zone time lag estimates

NASA Astrophysics Data System (ADS)

Fenton, O.; Vero, S.; Ibrahim, T. G.; Murphy, P. N. C.; Sherriff, S. C.; Ó hUallacháin, D.

2015-11-01

Elucidation of when the loss of pollutants, below the rooting zone in agricultural landscapes, affects water quality is important when assessing the efficacy of mitigation measures. Investigation of this inherent time lag (tT) is divided into unsaturated (tu) and saturated (ts) components. The duration of these components relative to each other differs depending on soil characteristics and the landscape position. The present field study focuses on tu estimation in a scenario where the saturated zone is likely to constitute a higher proportion of tT. In such instances, or where only initial breakthrough (IBT) or centre of mass (COM) is of interest, utilisation of site and depth specific "simple" textural class or actual sand-silt-clay percentages to generate soil water characteristic curves with associated soil hydraulic parameters is acceptable. With the same data it is also possible to estimate a soil physical quality (S) parameter for each soil layer which can be used to infer many other physical, chemical and biological quality indicators. In this study, hand texturing in the field was used to determine textural classes of a soil profile. Laboratory methods, including hydrometer, pipette and laser diffraction methods were used to determine actual sand-silt-clay percentages of sections of the same soil profile. Results showed that in terms of S, hand texturing resulted in a lower index value (inferring a degraded soil) than that of pipette, hydrometer and laser equivalents. There was no difference between S index values determined using the pipette, hydrometer and laser diffraction methods. The difference between the three laboratory methods on both the IBT and COM stages of tu were negligible, and in this instance were unlikely to affect either groundwater monitoring decisions, or to be of consequence from a policy perspective. When tu estimates are made over the full depth of the vadose zone, which may extend to several metres, errors resulting from the use of hydraulic parameters generated from hand texture data will be resultantly greater, and may lead to flawed predictions regarding the achievability of water policy targets. For this reason laboratory analysis, regardless of method, should be preferred to simple field assessments.

Conversion of rainforest into agroforestry and monoculture plantation in China: Consequences for soil phosphorus forms and microbial community.

PubMed

Wang, Jinchuang; Ren, Changqi; Cheng, Hanting; Zou, Yukun; Bughio, Mansoor Ahmed; Li, Qinfen

2017-10-01

Microbial communities and their associated enzyme activities affect quantity and quality of phosphorus (P) in soils. Land use change is likely to alter microbial community structure and feedback on ecosystem structure and function. This study presents a novel assessment of mechanistic links between microbial responses to land use and shifts in the amount and quality of soil phosphorus (P). We investigated effects of the conversion of rainforests into rubber agroforests (AF), young rubber (YR), and mature rubber (MR) plantations on soil P fractions (i.e., labile P, moderately labile P, occluded P, Ca P, and residual P) in Hainan Island, Southern China. Microbial community composition and microbial enzyme were assayed to assess microbial community response to forest conversion. In addition, we also identified soil P fractions that were closely related to soil microbial and chemical properties in these forests. Conversion of forest to pure rubber plantations and agroforestry system caused a negative response in soil microorganisms and activity. The bacteria phospholipid fatty acid (PLFAs) levels in young rubber, mature rubber and rubber agroforests decreased after forest conversion, while the fungal PLFAs levels did not change. Arbuscular mycorrhizal fungi (AMF) (16:1w5c) had the highest value of 0.246μmol(gOC) -1 in natural forest, followed by rubber agroforests, mature rubber and young rubber. Level of soil acid phosphatase activity declined soon (5 years) after forest conversion compared to natural forest, but it improved in mature rubber and agroforestry system. Labile P, moderately labile P, occluded P and residual P were highest in young rubber stands, while moderately labile, occluded and residual P were lowest in rubber agroforestry system. Soil P fractions such as labile P, moderately labile P, and Ca P were the most important contributors to the variation in soil microbial community composition. We also found that soil P factions differ significantly among the four transformation systems. Soil labile P faction and its potential sources (moderately labile P, occluded P, and residual P) were positively correlated with NO 3 - , but negatively correlated with AMF, suggesting that these properties play key roles in P transformation. Our study indicated that land use had an impact on microbial community composition and functions, which consequently influenced soil phosphorus availability and cycling. Copyright © 2017 Elsevier B.V. All rights reserved.

Understanding soil erosion impacts in temperate agroecosystems: bridging the gap between geomorphology and soil ecology

NASA Astrophysics Data System (ADS)

Baxter, C.; Rowan, J. S.; McKenzie, B. M.; Neilson, R.

2013-04-01

Soil is a key asset of natural capital, providing a myriad of goods and ecosystem services that sustain life through regulating, supporting and provisioning roles, delivered by chemical, physical and biological processes. One of the greatest threats to soil is accelerated erosion, which raises a natural process to unsustainable levels, and has downstream consequences (e.g. economic, environmental and social). Global intensification of agroecosystems is a major cause of soil erosion which, in light of predicted population growth and increased demand for food security, will continue or increase. Elevated erosion and transport is common in agroecosystems and presents a multi-disciplinary problem with direct physical impacts (e.g. soil loss), other less tangible impacts (e.g. loss of ecosystem productivity), and indirect downstream effects that necessitate an integrated approach to effectively address the problem. Climate is also likely to increase susceptibility of soil to erosion. Beyond physical response, the consequences of erosion on soil biota have hitherto been ignored, yet biota play a fundamental role in ecosystem service provision. To our knowledge few studies have addressed the gap between erosion and consequent impacts on soil biota. Transport and redistribution of soil biota by erosion is poorly understood, as is the concomitant impact on biodiversity and ability of soil to deliver the necessary range of ecosystem services to maintain function. To investigate impacts of erosion on soil biota a two-fold research approach is suggested. Physical processes involved in redistribution should be characterised and rates of transport and redistribution quantified. Similarly, cumulative and long-term impacts of biota erosion should be considered. Understanding these fundamental aspects will provide a basis upon which mitigation strategies can be considered.

Comparison of human exposure pathways in an urban brownfield: reduced risk from paving roads.

PubMed

James, Kyle; Farrell, Richard E; Siciliano, Steven D

2012-10-01

Risk assessments often do not quantify the risk associated with soil inhalation. This pathway generally makes a negligible contribution to the cumulative risk, because soil ingestion is typically the dominant exposure pathway. Conditions in northern or rural centers in Canada characterized by large areas of exposed soil, including unpaved roads, favor the resuspension of soil particles, making soil inhalation a relevant risk pathway. The authors determined and compared human exposure to metals and polycyclic aromatic hydrocarbons (PAHs) from soil ingestion and inhalation and analyzed the carcinogenic and noncarcinogenic risks before and after roads were paved in a northern community. To determine the inhalation exposure, three size fractions of airborne particulate matter were collected (total suspended particulates [TSP], particulate matter with an aerodynamic diameter less than 10 µm [PM10], and particulate matter with an aerodynamic diameter less than 2.5 µm [PM2.5]) before and after roads were paved. Road paving reduced the concentration of many airborne contaminants by 25 to 75%, thus reducing risk. For example, before paving, the carcinogenic risk associated with inhalation of Cr was 3.4 excess cancers per 100,000 people exposed, whereas after paving, this risk was reduced to 1.6 in 100,000. Paving roads reduced the concentrations of total suspended particulates (TSP; p < 0.1) and PM10 (p < 0.05) but not PM25. Consequently, the ingestion of inhaled soil particles was substantially reduced. The authors conclude that resuspended soil is likely an important source of risk for many northern communities and that paving roads is an effective method of reducing risk from the inhalation of soil particles. Copyright © 2012 SETAC.

Heavy element affinities in Apollo 17 samples

NASA Technical Reports Server (NTRS)

Allen, R. O., Jr.; Jovanovic, S.; Reed, G. W., Jr.

1975-01-01

Pb-204, Bi, Tl, and Zn in samples from the Apollo 17 site exhibit relationships not found in samples from other sites. Pb-204, Tl, and Zn in residues remaining after dilute acid leaching are correlated with one another. Orange soil 74220, which is enriched in Pb-204, Tl, and Zn, is included in these relationships. In addition, the submicron metallic phase generally associated with agglutinate formation is correlated with all three of these elements; this relationship has already been reported for Pb-204 in other samples. Thus, orange soil and agglutinates appear to be involved in concentrating heavy volatile metals. A process other than mixing is required to account for this. As a consequence of the isolation of the landing site by the surrounding massifs, local supply and recycling of volatile trace elements in soils may account for some of the interelement relations.

Soil biodiversity and soil community composition determine ecosystem multifunctionality

PubMed Central

Wagg, Cameron; Bender, S. Franz; Widmer, Franco; van der Heijden, Marcel G. A.

2014-01-01

Biodiversity loss has become a global concern as evidence accumulates that it will negatively affect ecosystem services on which society depends. So far, most studies have focused on the ecological consequences of above-ground biodiversity loss; yet a large part of Earth’s biodiversity is literally hidden below ground. Whether reductions of biodiversity in soil communities below ground have consequences for the overall performance of an ecosystem remains unresolved. It is important to investigate this in view of recent observations that soil biodiversity is declining and that soil communities are changing upon land use intensification. We established soil communities differing in composition and diversity and tested their impact on eight ecosystem functions in model grassland communities. We show that soil biodiversity loss and simplification of soil community composition impair multiple ecosystem functions, including plant diversity, decomposition, nutrient retention, and nutrient cycling. The average response of all measured ecosystem functions (ecosystem multifunctionality) exhibited a strong positive linear relationship to indicators of soil biodiversity, suggesting that soil community composition is a key factor in regulating ecosystem functioning. Our results indicate that changes in soil communities and the loss of soil biodiversity threaten ecosystem multifunctionality and sustainability. PMID:24639507

Combined effects of low-molecular-weight organic acids on mobilization of arsenic and lead from multi-contaminated soils.

PubMed

Onireti, Olaronke O; Lin, Chuxia; Qin, Junhao

2017-03-01

A batch experiment was conducted to examine the combined effects of three common low-molecular-weight organic acids (LMWOAs) on the mobilization of arsenic and lead in different types of multi-contaminated soils. The capacity of individual LMWOAs (at a same molar concentration) to mobilize soil-borne As and Pb varied significantly. The combination of the organic acids did not make a marked "additive" effect on the mobilization of the investigated three elements. An "antagonistic" effect on element mobilization was clear in the treatments involving oxalic acid for some soils. The acid strength of a LMWOA did not play an important role in controlling the mobilization of elements. While the mobilization of As and Pb was closely associated with the dissolution of soil-borne Fe, soil properties such as original soil pH, organic matter contents and the total amount of the element relative to the total Fe markedly complicated the mobility of that element. Aging led to continual consumption of proton introduced from addition of LMWOAs and consequently caused dramatic changes in solution-borne Fe, which in turn resulted in change in As and Pb in the soil solution though different elements behaved differently. Copyright © 2016 Elsevier Ltd. All rights reserved.

Speciation of vanadium in Chinese cabbage (Brassica rapa L.) and soils in response to different levels of vanadium in soils and cabbage growth.

PubMed

Tian, Liyan; Yang, Jinyan; Alewell, Christine; Huang, Jen-How

2014-09-01

This study highlights the accumulation and speciation of vanadium in Chinese cabbage (Brassica rapa L.) in relation to the speciation of soil vanadium with pot experiments at 122-622mgVkg(-1) by spiking NH4VO3. Cabbage planting decreased the bioavailable and residual vanadium based on sequential extraction, leading to enrichment of oxalate-extractable vanadium in soils. The biomass production increased with increasing concentrations of soil vanadium from 122 to 372mgVkg(-1), probably due to the increasing nitrogen availability and low vanadium availability in our soils with a consequent low vanadium toxicity. Although the concentrations of root vanadium (14.4-24.9mgVkg(-1)) related positively with soil vanadium, the bio-dilution alleviated the increase of leaf vanadium (2.1-2.7mgVkg(-1)). The predominance of vanadium(IV) in leaves (∼60-80% of total vanadium) indicates bio-reduction of vanadium in Chinese cabbage, since the mobile vanadium in oxic soils was usually pentavalent. Approximately 15-20% of the leaf vanadium was associated with recalcitrant leaf tissues. The majority of leaf vanadium was water and ethanol extractable, which is considered mobile and may cause more toxic effects on Chinese cabbage. Copyright © 2014 Elsevier Ltd. All rights reserved.

Impact of land-use change and soil organic carbon quality on microbial diversity in soils across Europe.

PubMed

Szoboszlay, Márton; Dohrmann, Anja B; Poeplau, Christopher; Don, Axel; Tebbe, Christoph C

2017-12-01

Land-use and their change have dramatic consequences for above-ground biodiversity, but their impact on soil microbial communities is poorly understood. In this study, soils from 19 European sites representing conversion of croplands to grasslands or forests and of grasslands to croplands or forests were characterized for microbial abundance and bacterial diversity. The abundance of Bacteria and Fungi but not Archaea responded to land-use change. Site was the major determinant of the soil bacterial community structure, explaining 32% of the variation in 16S rRNA gene diversity. While the quantity of soil organic carbon (SOC) only explained 5% of the variation, SOC when differentiated by its quality could explain 22%. This was similar to the impact of soil pH (21%) and higher than that of land-use type (15%). Croplands had the highest bacterial diversity. Converting croplands to grassland caused an increase of Verrucomicrobia; croplands to forest increased Rhizobiales but decreased Bacteroidetes and Nitrospirae; and grasslands to cropland increased Gemmatimonadetes but decreased Verrucomicrobia and Planctomycetes. Network analysis identified associations between particular SOC fractions and specific bacterial taxa. We conclude that land-use-related effects on soil microorganisms can be consistently observed across a continental scale. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Consequences of varied soil hydraulic and meteorological complexity on unsaturated zone time lag estimates.

PubMed

Vero, S E; Ibrahim, T G; Creamer, R E; Grant, J; Healy, M G; Henry, T; Kramers, G; Richards, K G; Fenton, O

2014-12-01

The true efficacy of a programme of agricultural mitigation measures within a catchment to improve water quality can be determined only after a certain hydrologic time lag period (subsequent to implementation) has elapsed. As the biophysical response to policy is not synchronous, accurate estimates of total time lag (unsaturated and saturated) become critical to manage the expectations of policy makers. The estimation of the vertical unsaturated zone component of time lag is vital as it indicates early trends (initial breakthrough), bulk (centre of mass) and total (Exit) travel times. Typically, estimation of time lag through the unsaturated zone is poor, due to the lack of site specific soil physical data, or by assuming saturated conditions. Numerical models (e.g. Hydrus 1D) enable estimates of time lag with varied levels of input data. The current study examines the consequences of varied soil hydraulic and meteorological complexity on unsaturated zone time lag estimates using simulated and actual soil profiles. Results indicated that: greater temporal resolution (from daily to hourly) of meteorological data was more critical as the saturated hydraulic conductivity of the soil decreased; high clay content soils failed to converge reflecting prevalence of lateral component as a contaminant pathway; elucidation of soil hydraulic properties was influenced by the complexity of soil physical data employed (textural menu, ROSETTA, full and partial soil water characteristic curves), which consequently affected time lag ranges; as the importance of the unsaturated zone increases with respect to total travel times the requirements for high complexity/resolution input data become greater. The methodology presented herein demonstrates that decisions made regarding input data and landscape position will have consequences for the estimated range of vertical travel times. Insufficiencies or inaccuracies regarding such input data can therefore mislead policy makers regarding the achievability of water quality targets. Copyright © 2014 Elsevier B.V. All rights reserved.

Methodological approach for evaluating the response of soil hydrological behavior to irrigation with treated municipal wastewater

NASA Astrophysics Data System (ADS)

Coppola, A.; Santini, A.; Botti, P.; Vacca, S.; Comegna, V.; Severino, G.

2004-06-01

This paper aims mainly to provide experimental evidence of the consequences of urban wastewater reuse in irrigation practices on the hydrological behavior of soils. The effects on both the hydraulic and dispersive properties of representative soils in southern Sardinia are illustrated. Ten undisturbed soil monoliths, 120 cm in height and 40 cm in diameter, were collected from plots previously selected through a soil survey. Soil hydraulic and solute transport properties were determined before and after application of wastewater using transient water infiltration and steady state-solute transport column experiments. Detailed spatial-temporal information on the propagation of water and solute through the soil profiles were obtained by monitoring soil water contents, θ, pressure heads, h, and solute concentrations, C, measured by a network of time domain reflectometry probes, tensiometers and solution samplers horizontally inserted in each column at different depths. A disturbed layer at the soil surface, which expands in depth with time, was observed, characterized by reduced soil porosity, translation of pore size distribution towards narrower pores and consequent decrease in water retention, hydraulic conductivity and hydrodynamic dispersion. It is shown that these changes occurring in the disturbed soil layer, although local by nature, affect the hydrological behavior of the whole soil profile. Due to the disturbed layer formation, the soil beneath never saturates. Such behavior has important consequences on the solute transport in soils, as unsaturated conditions mean higher residence times of solutes, even of those normally characterized by considerable mobility (e.g. boron), which may accumulate along the profile. The results mainly provide experimental evidence that knowledge of the chemical and microbiological composition of the water is not sufficient to evaluate its suitability for irrigation. Other factors, mainly soil physical and hydrological characteristics, should be considered in order to define appropriate guidelines for wastewater management.

Application of biochar to soil reduces cancer risk via rice consumption: a case study in Miaoqian village, Longyan, China.

PubMed

Khan, Sardar; Reid, Brian J; Li, Gang; Zhu, Yong-Guan

2014-07-01

Consumption of rice contaminated with potentially toxic elements (PTEs) is a major pathway for human exposure to PTEs. This is particularly true in China's so called "Cancer Villages". In this study, sewage sludge biochar (SSBC) was applied to soil (at 5% and 10%) to suppress PTE phytoavailability and as a consequence to reduce PTE levels in rice grown in mining impacted paddy soils. Risk assessment indicated that SSBC addition (10%) markedly (P≤0.05) decreased the daily intake, associated with the consumption of rice, of PTEs (As, Cd, Co, Cu, Mn, Pb and Zn by: 68, 42, 55, 29, 43, 38 and 22%, respectively). In treatments containing SSBC (10%) the health quotient (HQ) indices for PTEs (except for As, Cu and Mn) were <1, indicating that SSBC suppressed the health risk associated with PTEs in rice. The addition of SSBC (10%) markedly (P≤0.01) reduced AsIII (72%), dimethylarsinic acid (DMA) (74%) and AsV (62%) concentrations in rice. Consequentially, following SSBC application (10%), the incremental lifetime cancer (ILTR) value for iAs (AsIII+AsV) associated with the consumption of rice was significantly (P≤0.01) reduced by 66%. These findings suggest that SSBC could be a useful soil amendment to mitigating PTE exposure, through rice consumption, in China's "Cancer Villages". Copyright © 2014 Elsevier Ltd. All rights reserved.

Understanding and enhancing soil health: the solution for reversing soil degradation

USDA-ARS?s Scientific Manuscript database

This special issue of Sustainability documents both the magnitude and global prevalence of soil degradation and helps illustrate (1) various factors contributing to the problem, (2) its past and current impacts, and (3) projected consequences to humankind if degradation of our fragile soil resource...

Trace elements assessment in agricultural and desert soils of Aswan area, south Egypt: Geochemical characteristics and environmental impacts

NASA Astrophysics Data System (ADS)

Darwish, Mohamed Abdallah Gad; Pöllmann, Hebert

2015-12-01

Determination of chemical elements, Al, Cd, Co, Cr, Cu, Fe, Li, Mn, Mo, Ni, P, Pb, Sc, Sr, Ti, Y, and Zn have been performed in agricultural and desert soils and alfalfa (Medicago sativa) at Aswan area. Consequently, the pollution indices, univariate and multivariate statistical methods have been applied, in order to assess the geochemical characteristics of these elements and their impact on soil environmental quality and plant, and to reach for their potential input sources. The investigation revealed that the mean and range values of all element concentrations in agricultural soil are higher than those in desert soil. Furthermore, the agricultural soil displayed various degrees of enrichment and pollution of Cd, Zn, Mo, Co, P, Ti, Pb. The geochemical pattern of integrated pollution indices gave a clear image of extreme and strong pollution in the agricultural soil stations, their poor quality with high risk to human health and considered as a tocsin for an alert. In contrast, the desert soil is the good environmental quality and safe for plant, animal and human health. Alfalfa is tolerant plant and considered as a biomarker for P and Mo in polluted agricultural soil. Four geochemical associations of analyzing elements in agricultural soil and three ones in desert soil have been generated, and their enhancements were essentially caused by various anthropogenic activities and geogenic sources. The investigation also revealed that the broad extended desert soil is fruitful and promising as cultivable lands for agricultural processes in the futures.

Microbial respiration and DOC composition in leachates from Holocene and Pleistocene soils from the Kolyma River basin in Eastern Siberia

NASA Astrophysics Data System (ADS)

Lewis, K.; Schade, J. D.; Sobczak, W. V.; Holmes, R. M.; Zimov, N.; Bulygina, E. B.; Chandra, S.; Bunn, A. G.; Russell-Roy, L.; Seybold, E. C.

2010-12-01

Permafrost is generally considered a long-term sink for carbon that remains locked away from the global carbon cycle. Anthropogenic climate change is likely to lead to thawing of permafrost and deepening of the soil active layer. Consequently, this carbon sink may become unlocked and available for bacterial decomposition, returning stored carbon to the active carbon cycle, with potentially severe consequences for atmospheric CO2 concentrations. The Kolyma watershed, in the Eastern Siberian Arctic, is underlain by continuous permafrost, often referred to as Yedoma, which provides a unique environment to study potential consequences of permafrost thaw for carbon dynamics in aquatic and terrestrial ecosystems. In order to predict the potential consequences of a major carbon input from thawing permafrost, we assessed the relative bioavailabilty of soil carbon by measuring rates of microbial consumption and changes in DOM composition in soil leachates. At two spatially distinct sample sites, soil was collected throughout the profile from the active layer and from permafrost, including soils from both Holocene and Pleistocene-era permafrost. To evaluate the rates of carbon processing and potential linkages to N and P cycles, we conducted a series of bottle experiments in which we measured biological oxygen demand as a proxy for carbon processing and assessed changes in the composition of dissolved organic carbon using spectral analyses. Experiments were conducted on leachate collected from each soil type. Each experiment included treatments in which leachates were enriched with nitrogen and phosphorus to determine whether carbon processing in soils was nutrient limited. We found substantial variation in oxygen consumption, with Yedoma soils generally exhibiting higher rates than Holocene soils, suggesting higher concentrations of labile carbon. We found no evidence of nutrient limitation of carbon processing in any soil leachates. Spectral slope analysis suggests that carbon processing increased the proportion of heavy aromatic carbon compounds in all but one soil type, suggesting that small molecular weight compounds are consumed first. The exception was the most active Yedoma soil, which showed the opposite effect, indicating an increase in the proportion of small molecules due to the presence of a different, and perhaps more digestible, form of carbon. These results suggest strong spatial variation in the amount and form of available carbon, as well as qualitative differences in the dynamics of carbon processing.

Soil structural stability assessment with the fluidized bed, aggregate stability, and rainfall simulation on long-term tillage and crop rotation systems

USDA-ARS?s Scientific Manuscript database

The formation of stable soil aggregates is an important indicator of soil susceptibility to erosion and a factor defining soil health. On cropland, tillage practices and crop rotations have shown to control soil biophysical properties with potential consequences on erosion susceptibility. Thus, the ...

Microbial exopolysaccharides as determinants of geomorphological, hydrological and optical properties of soil crusts from the Precambrian till today

NASA Astrophysics Data System (ADS)

Garcia-Pichel, F.

2012-04-01

The presence of microbial extracellular polysaccharides (EPS) in the soil solution and/or in association with particular microbial types can impart novel properties to biological soil crust (BSC), and hence to soil surfaces. For the most part these properties are of a geobiological relevance that exceeds what one could surmise from its relatively low specific mass content. I will review some examples that range from the mundane to the unexpected. EPS associated with filamentous cyanobacteria can effectively and in the long term stabilize the soil surface against erosive forces, even after the microbes are long gone. Electrostatic interactions between EPS and blowing dust may help retain dust particles, enriching the soil with new nutrient sources. In a telltale sign of BSC presence, EPS is the agent that allows sandy soils to fold and curl-up, to form pee-tee's and elephant-skin surfaces, and to crack into polygons like clays would. EPS in large quantities in flat crusts can retain fluids (both liquid and gaseous) resulting in the alteration of hydrological flow and in the formation of internal vesicular horizons, gas bubbles, pock-marked surfaces and other characteristic structures. Yet, in some settings, EPS plays an architectural role in creating a "spongy" texture that increases hydraulic conductivity. This architectural role can indirectly result in significant increases of a crust's albedo. While the diversity of consequences of EPS presence is far from understood, evidence for its sustained role through Earth's history can be found in the form of sedimentary bio-signatures as far back as the Proterozoic.

Equine grass sickness in Scotland: A case-control study of environmental geochemical risk factors.

PubMed

Wylie, C E; Shaw, D J; Fordyce, F M; Lilly, A; Pirie, R S; McGorum, B C

2016-11-01

We hypothesised that the apparent geographical distribution of equine grass sickness (EGS) is partly attributable to suboptimal levels of soil macro- and trace elements in fields where EGS occurs. If proven, altering levels of particular elements could be used to reduce the risk of EGS. To determine whether the geographical distribution of EGS cases in eastern Scotland is associated with the presence or absence of particular environmental chemical elements. Retrospective time-matched case-control study. This study used data for 455 geo-referenced EGS cases and 910 time-matched controls in eastern Scotland, and geo-referenced environmental geochemical data from the British Geological Survey Geochemical Baseline Survey of the Environment stream sediment (G-BASE) and the James Hutton Institute, National Soil Inventory of Scotland (NSIS) datasets. Multivariable statistical analyses identified clusters of three main elements associated with cases from (i) the G-BASE dataset - higher environmental Ti and lower Zn, and (ii) the NSIS dataset - higher environmental Ti and lower Cr. There was also some evidence from univariable analyses for lower Al, Cd, Cu, Ni and Pb and higher Ca, K, Mo, Na and Se environmental concentrations being associated with a case. Results were complicated by a high degree of correlation between most geochemical elements. The work presented here would appear to reflect soil- not horse-level risk factors for EGS, but due to the complexity of the correlations between elements, further work is required to determine whether these associations reflect causality, and consequently whether interventions to alter concentrations of particular elements in soil, or in grazing horses, could potentially reduce the risk of EGS. The effect of chemical elements on the growth of those soil microorganisms implicated in EGS aetiology also warrants further study. © 2015 The The Authors Equine Veterinary Journal © 2015 EVJ Ltd.

Fuels planning: science synthesis and integration; environmental consequences fact sheet 14: Fuels reduction and compaction

Treesearch

Deborah Page-Dumroese

2005-01-01

Moving equipment and logs over the surface of forest soils causes gouges and ruts in the mineral soil, displaces organic matter, and can cause compaction. Compaction is the component of soil productivity most influenced by forest management, but the degree to which soils may be compacted depends on initial soil bulk density. For example, low bulk density soils (such as...

Wetland soil carbon in a watershed context for the prairie pothole region

USDA-ARS?s Scientific Manuscript database

Wetland restoration in the Prairie Pothole Region (PPR) often involves soil removal to enhance water storage volume and/or remove seedbanks of invasive species. Consequences of soil removal could include loss of soil organic carbon (SOC) important to ecosystem functions, such as water-holding capaci...

Soil phosphatase and urease activities impacted by cropping systems and water management

USDA-ARS?s Scientific Manuscript database

Soil enzymes can play an important role in nutrient availability to plants. Consequently, soil enzyme measurements can provide useful information on soil fertility for crop production. We examined the impact of cropping system and water management on phosphatase, urease, and microbial biomass C in s...

Agricultural legacies in forest environments: tree communities, soil properties, and light availability.

PubMed

Flinn, Kathryn M; Marks, P L

2007-03-01

Temperate deciduous forests across much of Europe and eastern North America reflect legacies of past land use, particularly in the diversity and composition of plant communities. Intense disturbances, such as clearing forests for agriculture, may cause persistent environmental changes that continue to shape vegetation patterns as landscapes recover. We assessed the long-term consequences of agriculture for environmental conditions in central New York forests, including tree community structure and composition, soil physical and chemical properties, and light availability. To isolate the effects of agriculture, we compared 20 adjacent pairs of forests that were never cleared for agriculture (primary forests) and forests that established 85-100 years ago on plowed fields (secondary forests). Tree communities in primary and secondary forests had similar stem density, though secondary forests had 14% greater basal area. Species composition differed dramatically between the two forest types, with primary forests dominated by Acer saccharum and Fagus grandifolia and secondary forests by Acer rubrum and Pinus strobus. Primary and secondary forests showed no consistent differences in soil physical properties or in the principal gradient of soil fertility associated with soil pH. Within stands, however, soil water content and pH were more variable in primary forests. Secondary forest soils had 15% less organic matter, 16% less total carbon, and 29% less extractable phosphorus in the top 10 cm than adjacent primary stands, though the ranges of the forest types mostly overlapped. Understory light availability in primary and secondary forests was similar. These results suggest that, within 100 years, post-agricultural stands have recovered conditions comparable to less disturbed forests in many attributes, including tree size and number, soil physical properties, soil chemical properties associated with pH, and understory light availability. The principal legacies of agriculture that remain in these forests are the reduced levels of soil organic matter, carbon, and phosphorus; the spatial homogenization of soil properties; and the altered species composition of the vegetation.

Vegetation response to soil salinity and waterlogging in three saltmarsh hydrosequences through macronutrients distribution

NASA Astrophysics Data System (ADS)

Ferronato, Chiara; Speranza, Maria; Ferroni, Lucia; Buscaroli, Alessandro; Vianello, Gilmo; Vittori Antisari, Livia

2018-01-01

Saltmarshes consist of soil hydrosequences, where the complex interactions between water tide fluctuations, soil physicochemical properties and plant colonization contribute to the triggering of the pedogenetic processes and consequently to the stability of the saltmarsh edges. In this study, the composition and richness of the vegetation cover were investigated along soil transects in three different saltmarshes. With the aim to investigate the response of the vegetation to the soil hydroperiod and its influence on the availability of soil nutrients, plant and soil samples were collected in four representative sites on each saltmarsh transect (hydrosequence). Among the different species of saltmarshes, L. vulgare and S. europaea colonized intertidal areas, where an accumulation of nutrients (Ca, K, P, S and Na) and organic C and total N (OC and TN, respectively) was found. These intertidal areas are the "critical transition zones", which drive the transition between the terrestrial and the aquatic systems along the increase of soil salinity and water saturation. Among the different element cycles analysed in the soil-plant system, the analysis of the Na and S dynamic, through both bioconcentration and translocation indexes, explains the different adaptation mechanisms to different salinity and waterlogging stressors. The limiting of the species areal was generally associated firstly with a decrease in their Na and S bioconcentration factor and, to a lesser extent, with the increase in their Na and S translocation.

Environmental and Regional Determinants of Anopheles (Diptera: Culicidae) Larval Distribution in Belize, Central America

DTIC Science & Technology

1993-01-01

hydrology , soils and, consequently, vege- tation cover (Hartshorn et al. 1984). The terms “regional” and “region” are used in this article for...and A. argyritar- sis Robineau-Desvoidy, were used for analysis of associations with environmental factors, habitat types, and regions. Using ...significantly contributing environmental variables, dis- criminant functions (DF) were constructed for the Anopheles species, except for A. argy

Root-associated fungal microbiota of nonmycorrhizal Arabis alpina and its contribution to plant phosphorus nutrition

PubMed Central

Almario, Juliana; Jeena, Ganga; Wunder, Jörg; Langen, Gregor; Zuccaro, Alga; Coupland, George

2017-01-01

Most land plants live in association with arbuscular mycorrhizal (AM) fungi and rely on this symbiosis to scavenge phosphorus (P) from soil. The ability to establish this partnership has been lost in some plant lineages like the Brassicaceae, which raises the question of what alternative nutrition strategies such plants have to grow in P-impoverished soils. To understand the contribution of plant–microbiota interactions, we studied the root-associated fungal microbiome of Arabis alpina (Brassicaceae) with the hypothesis that some of its components can promote plant P acquisition. Using amplicon sequencing of the fungal internal transcribed spacer 2, we studied the root and rhizosphere fungal communities of A. alpina growing under natural and controlled conditions including low-P soils and identified a set of 15 fungal taxa consistently detected in its roots. This cohort included a Helotiales taxon exhibiting high abundance in roots of wild A. alpina growing in an extremely P-limited soil. Consequently, we isolated and subsequently reintroduced a specimen from this taxon into its native P-poor soil in which it improved plant growth and P uptake. The fungus exhibited mycorrhiza-like traits including colonization of the root endosphere and P transfer to the plant. Genome analysis revealed a link between its endophytic lifestyle and the expansion of its repertoire of carbohydrate-active enzymes. We report the discovery of a plant–fungus interaction facilitating the growth of a nonmycorrhizal plant under native P-limited conditions, thus uncovering a previously underestimated role of root fungal microbiota in P cycling. PMID:28973917

Soil erosion, sedimentation and the carbon cycle

NASA Astrophysics Data System (ADS)

Cammeraat, L. H.; Kirkels, F.; Kuhn, N. J.

2012-04-01

Historically soil erosion focused on the effects of on-site soil quality loss and consequently reduced crop yields, and off-site effects related to deposition of material and water quality issues such as increased sediment loads of rivers. In agricultural landscapes geomorphological processes reallocate considerable amounts of soil and soil organic carbon (SOC). The destiny of SOC is of importance because it constitutes the largest C pool of the fast carbon cycle, and which cannot only be understood by looking at the vertical transfer of C from soil to atmosphere. Therefore studies have been carried out to quantify this possible influence of soil erosion and soil deposition and which was summarized by Quinton et al. (2010) by "We need to consider soils as mobile systems to make accurate predictions about the consequences of global change for terrestrial biogeochemical cycles and climate feedbacks". Currently a debate exists on the actual fate of SOC in relation to the global carbon cycle, represented in a controversy between researchers claiming that erosion is a sink, and those who claim the opposite. This controversy is still continuing as it is not easy to quantify and model the dominating sink and source processes at the landscape scale. Getting insight into the balance of the carbon budget requires a comprehensive research of all relevant processes at broad spatio-temporal scales, from catchment to regional scales and covering the present to the late Holocene. Emphasising the economic and societal benefits, the merits for scientific knowledge of the carbon cycle and the potential to sequester carbon and consequently offset increasing atmospheric CO2 concentrations, make the fate of SOC in agricultural landscapes a high-priority research area. Quinton, J.N., Govers, G., Van Oost, K., Bardgett, R.D., 2010. The impact of agricultural soil erosion on biogeochemical cycling. Nature Geosci, 3, 311-314.

A Manual on Conservation of Soil and Water. Appropriate Technologies for Development. R-38.

ERIC Educational Resources Information Center

Peace Corps, Washington, DC. Information Collection and Exchange Div.

In order to keep the land productive, a good conservation program is imperative. The primary purpose of soil and water conservation is to prevent soil erosion and heal its scars. This handbook explains the causes, processes, and consequences of soil erosion and depletion, and describes major soil- and water-conservation measures. This book was…

Reduction in soil aggregation in response to dust emission processes

NASA Astrophysics Data System (ADS)

Swet, Nitzan; Katra, Itzhak

2016-09-01

Dust emission by aeolian (wind) soil erosion depends on the topsoil properties of the source area, especially on the nature of the aggregates where most dust particles are held. Although the key role of soil aggregates in dust emission, the response of soil aggregation to aeolian processes and its implications for dust emission remain unknown. This study focuses on aggregate size distribution (ASD) analyses before and after in-situ aeolian experiments in semiarid loess soils that are associated with dust emission. Wind tunnel simulations show that particulate matter (PM) emission and saltation rates depend on the initial ASD and shear velocity. Under all initial ASD conditions, the content of saltator-sized aggregates (63-250 μm) increased by 10-34% due to erosion of macro-aggregates (> 500 μm), resulting in a higher size ratio (SR) between the saltators and macro-aggregates following the aeolian erosion. The results revealed that the saltator production increases significantly for soils that are subjected to short-term (anthropogenic) disturbance of the topsoil. The findings highlight a decrease in soil aggregation for all initial ASD's in response to aeolian erosion, and consequently its influence on the dust emission potential. Changes in ASD should be considered as a key parameter in dust emission models of complex surfaces.

Use of Tunable Whole-Cell Bioreporters to Assess Bioavailable Cadmium and Remediation Performance in Soils

PubMed Central

Yoon, Youngdae; Kim, Sunghoon; Chae, Yooeun; Kang, Yerin; Lee, Youngshim; Jeong, Seung-Woo; An, Youn-Joo

2016-01-01

It is important to have tools to measure the bioavailability to assess the risks of pollutants because the bioavailability is defined as the portions of pollutants showing the biological effects on living organisms. This study described the construction of tunable Escherichia coli whole-cell bioreporter (WCB) using the promoter region of zinc-inducible operon and its application on contaminated soils. It was verified that this WCB system showed specific and sensitive responses to cadmium rather than zinc in the experimental conditions. It was inferred that Cd(II) associates stronger with ZntR, a regulatory protein of zinc-inducible operon, than other metal ions. Moreover, the expression of reporter genes, egfp and mcherry, were proportional to the concentration of cadmium, thereby being a quantitative sensor to monitor bioavailable cadmium. The capability to determine bioavailable cadmium was verified with Cd(II) amended LUFA soils, and then the applicability on environmental systems was investigated with field soils collected from smelter area in Korea before and after soil-washing. The total amount of cadmium was decreased after soil washing, while the bioavailability was increased. Consequently, it would be valuable to have tools to assess bioavailability and the effectiveness of soil remediation should be evaluated in the aspect of bioavailability as well as removal efficiency. PMID:27171374

Use of Tunable Whole-Cell Bioreporters to Assess Bioavailable Cadmium and Remediation Performance in Soils.

PubMed

Yoon, Youngdae; Kim, Sunghoon; Chae, Yooeun; Kang, Yerin; Lee, Youngshim; Jeong, Seung-Woo; An, Youn-Joo

2016-01-01

It is important to have tools to measure the bioavailability to assess the risks of pollutants because the bioavailability is defined as the portions of pollutants showing the biological effects on living organisms. This study described the construction of tunable Escherichia coli whole-cell bioreporter (WCB) using the promoter region of zinc-inducible operon and its application on contaminated soils. It was verified that this WCB system showed specific and sensitive responses to cadmium rather than zinc in the experimental conditions. It was inferred that Cd(II) associates stronger with ZntR, a regulatory protein of zinc-inducible operon, than other metal ions. Moreover, the expression of reporter genes, egfp and mcherry, were proportional to the concentration of cadmium, thereby being a quantitative sensor to monitor bioavailable cadmium. The capability to determine bioavailable cadmium was verified with Cd(II) amended LUFA soils, and then the applicability on environmental systems was investigated with field soils collected from smelter area in Korea before and after soil-washing. The total amount of cadmium was decreased after soil washing, while the bioavailability was increased. Consequently, it would be valuable to have tools to assess bioavailability and the effectiveness of soil remediation should be evaluated in the aspect of bioavailability as well as removal efficiency.

Biochar affects soil organic matter cycling and microbial functions but does not alter microbial community structure in a paddy soil.

PubMed

Tian, Jing; Wang, Jingyuan; Dippold, Michaela; Gao, Yang; Blagodatskaya, Evgenia; Kuzyakov, Yakov

2016-06-15

The application of biochar (BC) in conjunction with mineral fertilizers is one of the most promising management practices recommended to improve soil quality. However, the interactive mechanisms of BC and mineral fertilizer addition affecting microbial communities and functions associated with soil organic matter (SOM) cycling are poorly understood. We investigated the SOM in physical and chemical fractions, microbial community structure (using phospholipid fatty acid analysis, PLFA) and functions (by analyzing enzymes involved in C and N cycling and Biolog) in a 6-year field experiment with BC and NPK amendment. BC application increased total soil C and particulate organic C for 47.4-50.4% and 63.7-74.6%, respectively. The effects of BC on the microbial community and C-cycling enzymes were dependent on fertilization. Addition of BC alone did not change the microbial community compared with the control, but altered the microbial community structure in conjunction with NPK fertilization. SOM fractions accounted for 55% of the variance in the PLFA-related microbial community structure. The particulate organic N explained the largest variation in the microbial community structure. Microbial metabolic activity strongly increased after BC addition, particularly the utilization of amino acids and amines due to an increase in the activity of proteolytic (l-leucine aminopeptidase) enzymes. These results indicate that microorganisms start to mine N from the SOM to compensate for high C:N ratios after BC application, which consequently accelerate cycling of stable N. Concluding, BC in combination with NPK fertilizer application strongly affected microbial community composition and functions, which consequently influenced SOM cycling. Copyright © 2016 Elsevier B.V. All rights reserved.

A New Screening Method for Methane in Soil Gas Using Existing Groundwater Monitoring Wells

EPA Science Inventory

Methane in soil gas may have undesirable consequences. The soil gas may be able to form a flammable mixture with air and present an explosion hazard. Aerobic biodegradation of the methane in soil gas may consume oxygen that would otherwise be available for biodegradation of gasol...

Integrated metagenomics and network analysis of soil microbial community of the forest timberline

PubMed Central

Ding, Junjun; Zhang, Yuguang; Deng, Ye; Cong, Jing; Lu, Hui; Sun, Xin; Yang, Caiyun; Yuan, Tong; Van Nostrand, Joy D.; Li, Diqiang; Zhou, Jizhong; Yang, Yunfeng

2015-01-01

The forest timberline responds quickly and markedly to climate changes, rendering it a ready indicator. Climate warming has caused an upshift of the timberline worldwide. However, the impact on belowground ecosystem and biogeochemical cycles remain elusive. To understand soil microbial ecology of the timberline, we analyzed microbial communities via 16s rRNA Illumina sequencing, a microarray-based tool named GeoChip 4.0 and a random matrix theory-based association network approach. We selected 24 sampling sites at two vegetation belts forming the timberline of Shennongjia Mountain in Hubei Province of China, a region with extraordinarily rich biodiversity. We found that temperature, among all of measured environmental parameters, showed the most significant and extensive linkages with microbial biomass, microbial diversity and composition at both taxonomic and functional gene levels, and microbial association network. Therefore, temperature was the best predictor for microbial community variations in the timberline. Furthermore, abundances of nitrogen cycle and phosphorus cycle genes were concomitant with NH4+-N, NO3−-N and total phosphorus, offering tangible clues to the underlying mechanisms of soil biogeochemical cycles. As the first glimpse at both taxonomic and functional compositions of soil microbial community of the timberline, our findings have major implications for predicting consequences of future timberline upshift. PMID:25613225

Measuring soil sustainability via soil resilience.

PubMed

Ludwig, Marie; Wilmes, Paul; Schrader, Stefan

2018-06-01

Soils are the nexus of water, energy and food, which illustrates the need for a holistic approach in sustainable soil management. The present study therefore aimed at identifying a bioindicator for the evaluation of soil management sustainability in a cross-disciplinary approach between soil science and multi-omics research. For this purpose we first discuss the remaining problems and challenges of evaluating sustainability and consequently suggest one measurable bioindicator for soil management sustainability. In this concept, we define soil sustainability as the maintenance of soil functional integrity. The potential to recover functional and structural integrity after a disturbance is generally defined as resilience. This potential is a product of the past and the present soil management, and at the same time prospect of possible soil responses to future disturbances. Additionally, it is correlated with the multiple soil functions and hence reflecting the multifunctionality of the soil system. Consequently, resilience can serve as a bioindicator for soil sustainability. The measurable part of soil resilience is the response diversity, calculated from the systematic contrasting of multi-omic markers for genetic potential and functional activity, and referred to as potential Maximum Ecological Performance (MEPpot) in this study. Calculating MEPpot will allow to determine the thresholds of resistance and resilience and potential tipping points for a regime shift towards irreversible or permanent unfavorable soil states for each individual soil considered. The calculation of such ecosystem thresholds is to our opinion the current global cross-disciplinary challenge. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

Bioavailable soil phosphorus decreases with increasing elevation in a subarctic tundra landscape.

PubMed

Vincent, Andrea G; Sundqvist, Maja K; Wardle, David A; Giesler, Reiner

2014-01-01

Phosphorus (P) is an important macronutrient in arctic and subarctic tundra and its bioavailability is regulated by the mineralization of organic P. Temperature is likely to be an important control on P bioavailability, although effects may differ across contrasting plant communities with different soil properties. We used an elevational gradient in northern Sweden that included both heath and meadow vegetation types at all elevations to study the effects of temperature, soil P sorption capacity and oxalate-extractable aluminium (Alox) and iron (Feox) on the concentration of different soil P fractions. We hypothesized that the concentration of labile P fractions would decrease with increasing elevation (and thus declining temperature), but would be lower in meadow than in heath, given that N to P ratios in meadow foliage are higher. As expected, labile P in the form of Resin-P declined sharply with elevation for both vegetation types. Meadow soils did not have lower concentrations of Resin-P than heath soils, but they did have 2-fold and 1.5-fold higher concentrations of NaOH-extractable organic P and Residual P, respectively. Further, meadow soils had 3-fold higher concentrations of Alox + Feox and a 20% higher P sorption index than did heath soils. Additionally, Resin-P expressed as a proportion of total soil P for the meadow was on average half that in the heath. Declining Resin-P concentrations with elevation were best explained by an associated 2.5-3.0 °C decline in temperature. In contrast, the lower P availability in meadow relative to heath soils may be associated with impaired organic P mineralization, as indicated by a higher accumulation of organic P and P sorption capacity. Our results indicate that predicted temperature increases in the arctic over the next century may influence P availability and biogeochemistry, with consequences for key ecosystem processes limited by P, such as primary productivity.

Bioavailable Soil Phosphorus Decreases with Increasing Elevation in a Subarctic Tundra Landscape

PubMed Central

Vincent, Andrea G.; Sundqvist, Maja K.; Wardle, David A.; Giesler, Reiner

2014-01-01

Phosphorus (P) is an important macronutrient in arctic and subarctic tundra and its bioavailability is regulated by the mineralization of organic P. Temperature is likely to be an important control on P bioavailability, although effects may differ across contrasting plant communities with different soil properties. We used an elevational gradient in northern Sweden that included both heath and meadow vegetation types at all elevations to study the effects of temperature, soil P sorption capacity and oxalate-extractable aluminium (Alox) and iron (Feox) on the concentration of different soil P fractions. We hypothesized that the concentration of labile P fractions would decrease with increasing elevation (and thus declining temperature), but would be lower in meadow than in heath, given that N to P ratios in meadow foliage are higher. As expected, labile P in the form of Resin-P declined sharply with elevation for both vegetation types. Meadow soils did not have lower concentrations of Resin-P than heath soils, but they did have 2–fold and 1.5–fold higher concentrations of NaOH-extractable organic P and Residual P, respectively. Further, meadow soils had 3-fold higher concentrations of Alox + Feox and a 20% higher P sorption index than did heath soils. Additionally, Resin-P expressed as a proportion of total soil P for the meadow was on average half that in the heath. Declining Resin-P concentrations with elevation were best explained by an associated 2.5–3.0°C decline in temperature. In contrast, the lower P availability in meadow relative to heath soils may be associated with impaired organic P mineralization, as indicated by a higher accumulation of organic P and P sorption capacity. Our results indicate that predicted temperature increases in the arctic over the next century may influence P availability and biogeochemistry, with consequences for key ecosystem processes limited by P, such as primary productivity. PMID:24676035

Bacterial production of sunscreen pigments increase arid land soil surface temperature

NASA Astrophysics Data System (ADS)

Couradeau, Estelle; Karaoz, Ulas; Lim, HsiaoChien; Nunes da Rocha, Ulisses; Northern, Trent; Brodie, Eoin; Garcia-Pichel, Ferran

2015-04-01

Biological Soil Crusts (BSCs) are desert top soils formations built by complex microbial communities and dominated by the filamentous cyanobacterium Microcoleus sp. BSCs cover extensive desert areas where they correspond to millimeters size mantles responsible of soil stability and fertility. Despite their ecological importance, little is known about how these communities will endure climate change. It has been shown in North America that different species of Microcoleus showed distinct temperature preferences and that their continental biogeography may be susceptible to small changes in temperature with unknown consequences for the ecosystem function. Using a combination of physical, biochemical and microbiological analyses to characterize a successional gradient of crust maturity from light to dark BSCs (Moab, Utah) we found that the concentration of scytonemin (a cyanobacterial sunscreen pigment) increased with crust maturity. We also confirmed that scytonemin was by far the major pigment responsible of light absorption in the visible spectrum in BSCs, and is then responsible of the darkening of the BSCs (i.e decrease of albedo) with maturity. We measured the surface temperature and albedo and found, as predicted, a negative linear relationship between these two parameters. The decrease in albedo across the gradient of crust maturity corresponded to an increase in surface temperature up to 10° C. Upon investigation of microbial community composition using SSU rRNA gene analysis, we demonstrate that warmer crust surface temperatures (decreased albedo) are associated with a replacement of the dominant cyanobacterium; the thermosensitive Microcoleus sp. being replaced by a thermotolerant Microcoleus sp. in darker BSCs. This study supports at the local scale a finding previously made at the continental scale, but also sheds light on the importance of scytonemin as a significant warmer of soils with important consequences for BSC composition and function. Based on estimates of the global biomass of cyanobacteria in soil crusts, one can easily calculate that there must currently exist about 15 million metric tons of scytonemin accumulated on the surface of arid soils worldwide, whose role on soils temperature has been ignored so far.

Legacy effects of drought on plant-soil feedbacks and plant-plant interactions.

PubMed

Kaisermann, Aurore; de Vries, Franciska T; Griffiths, Robert I; Bardgett, Richard D

2017-09-01

Interactions between aboveground and belowground biota have the potential to modify ecosystem responses to climate change, yet little is known about how drought influences plant-soil feedbacks with respect to microbial mediation of plant community dynamics. We tested the hypothesis that drought modifies plant-soil feedback with consequences for plant competition. We measured net pairwise plant-soil feedbacks for two grassland plant species grown in monoculture and competition in soils that had or had not been subjected to a previous drought; these were then exposed to a subsequent drought. To investigate the mechanisms involved, we assessed treatment responses of soil microbial communities and nutrient availability. We found that previous drought had a legacy effect on bacterial and fungal community composition that decreased plant growth in conspecific soils and had knock-on effects for plant competitive interactions. Moreover, plant and microbial responses to subsequent drought were dependent on a legacy effect of the previous drought on plant-soil interactions. We show that drought has lasting effects on belowground communities with consequences for plant-soil feedbacks and plant-plant interactions. This suggests that drought, which is predicted to increase in frequency with climate change, may change soil functioning and plant community composition via the modification of plant-soil feedbacks. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Soil Erosion Study on the Chinese Loess Plateau

NASA Astrophysics Data System (ADS)

Hu, Yaxian; Guo, Shengli; Kuhn, Nikolaus

2017-04-01

The Chinese Loess Plateau, because of its highly erodible loess soils and hilly topography, has been extensively studied by soil scientists and geomorphologists. As a research hotspot, there are five national-level field stations across the Loess Plateau, with hundreds of erosion plots set up with various sizes, lengths, slope angles and vegetation covers. In addition, huge indoor rain simulation facilities exist in in different institutes which can provide rainfall simulations under a wide range of controlled conditions. Consequently, national-level restoration projects have achieved tremendous improvements in curbing soil erosion and improving regional agro-ecosystem, mostly by afforestation and soil rehabilitation. However, when implementing the advanced techniques and models that have been widely applied in the rest of the world, there are often regional considerations, which demand new approaches to overcome. One example are the unintentional impacts of restoration efforts, such as the establishment of apple orchards. Over 20 years, they have caused an increase in soil erodibility and lowered local ground water levels. Neither before the introduction of this landscape rehabilitation technique, nor now, has the impact of intensive fruit production been systematically studied, despite lending itself to systematic experiments. The lack of research is attributed to the general idea that trees protect soils and improve environmental services. This presentation identifies several such specific regional environmental issues associated with soil erosion on the Loess Plateau and discusses strategies to avoid missing important research questions.

Lead and Arsenic Bioaccessibility and Speciation as a Function of Soil Particle Size

EPA Science Inventory

Bioavailability research of soil metals has advanced considerably from default values to validated in vitro bioaccessibility (IVBA) assays for site-specific risk assessment. Previously, USEPA determined that the soil-size fraction representative of dermal adherence and consequent...

Phylogenetic and Functional Diversity of Total (DNA) and Expressed (RNA) Bacterial Communities in Urban Green Infrastructure Bioswale Soils.

PubMed

Gill, Aman S; Lee, Angela; McGuire, Krista L

2017-08-15

New York City (NYC) is pioneering green infrastructure with the use of bioswales and other engineered soil-based habitats to provide stormwater infiltration and other ecosystem functions. In addition to avoiding the environmental and financial costs of expanding traditional built infrastructure, green infrastructure is thought to generate cobenefits in the form of diverse ecological processes performed by its plant and microbial communities. Yet, although plant communities in these habitats are closely managed, we lack basic knowledge about how engineered ecosystems impact the distribution and functioning of soil bacteria. We sequenced amplicons of the 16S ribosomal subunit, as well as seven genes associated with functional pathways, generated from both total (DNA-based) and expressed (RNA) soil communities in the Bronx, NYC, NY, in order to test whether bioswale soils host characteristic bacterial communities with evidence for enriched microbial functioning, compared to nonengineered soils in park lawns and tree pits. Bioswales had distinct, phylogenetically diverse bacterial communities, including taxa associated with nutrient cycling and metabolism of hydrocarbons and other pollutants. Bioswale soils also had a significantly greater diversity of genes involved in several functional pathways, including carbon fixation ( cbbL-R [ cbbL gene, red-like subunit] and apsA ), nitrogen cycling ( noxZ and amoA ), and contaminant degradation ( bphA ); conversely, no functional genes were significantly more abundant in nonengineered soils. These results provide preliminary evidence that urban land management can shape the diversity and activity of soil communities, with positive consequences for genetic resources underlying valuable ecological functions, including biogeochemical cycling and degradation of common urban pollutants. IMPORTANCE Management of urban soil biodiversity by favoring taxa associated with decontamination or other microbial metabolic processes is a powerful prospect, but it first requires an understanding of how engineered soil habitats shape patterns of microbial diversity. This research adds to our understanding of urban microbial biogeography by providing data on soil bacteria in bioswales, which had relatively diverse and compositionally distinct communities compared to park and tree pit soils. Bioswales also contained comparatively diverse pools of genes related to carbon sequestration, nitrogen cycling, and contaminant degradation, suggesting that engineered soils may serve as effective reservoirs of functional microbial biodiversity. We also examined both total (DNA-based) and expressed (RNA) communities, revealing that total bacterial communities (the exclusive targets in the vast majority of soil studies) were poor predictors of expressed community diversity, pointing to the value of quantifying RNA, especially when ecological functioning is considered. Copyright © 2017 American Society for Microbiology.

Phylogenetic and Functional Diversity of Total (DNA) and Expressed (RNA) Bacterial Communities in Urban Green Infrastructure Bioswale Soils

PubMed Central

Lee, Angela; McGuire, Krista L.

2017-01-01

ABSTRACT New York City (NYC) is pioneering green infrastructure with the use of bioswales and other engineered soil-based habitats to provide stormwater infiltration and other ecosystem functions. In addition to avoiding the environmental and financial costs of expanding traditional built infrastructure, green infrastructure is thought to generate cobenefits in the form of diverse ecological processes performed by its plant and microbial communities. Yet, although plant communities in these habitats are closely managed, we lack basic knowledge about how engineered ecosystems impact the distribution and functioning of soil bacteria. We sequenced amplicons of the 16S ribosomal subunit, as well as seven genes associated with functional pathways, generated from both total (DNA-based) and expressed (RNA) soil communities in the Bronx, NYC, NY, in order to test whether bioswale soils host characteristic bacterial communities with evidence for enriched microbial functioning, compared to nonengineered soils in park lawns and tree pits. Bioswales had distinct, phylogenetically diverse bacterial communities, including taxa associated with nutrient cycling and metabolism of hydrocarbons and other pollutants. Bioswale soils also had a significantly greater diversity of genes involved in several functional pathways, including carbon fixation (cbbL-R [cbbL gene, red-like subunit] and apsA), nitrogen cycling (noxZ and amoA), and contaminant degradation (bphA); conversely, no functional genes were significantly more abundant in nonengineered soils. These results provide preliminary evidence that urban land management can shape the diversity and activity of soil communities, with positive consequences for genetic resources underlying valuable ecological functions, including biogeochemical cycling and degradation of common urban pollutants. IMPORTANCE Management of urban soil biodiversity by favoring taxa associated with decontamination or other microbial metabolic processes is a powerful prospect, but it first requires an understanding of how engineered soil habitats shape patterns of microbial diversity. This research adds to our understanding of urban microbial biogeography by providing data on soil bacteria in bioswales, which had relatively diverse and compositionally distinct communities compared to park and tree pit soils. Bioswales also contained comparatively diverse pools of genes related to carbon sequestration, nitrogen cycling, and contaminant degradation, suggesting that engineered soils may serve as effective reservoirs of functional microbial biodiversity. We also examined both total (DNA-based) and expressed (RNA) communities, revealing that total bacterial communities (the exclusive targets in the vast majority of soil studies) were poor predictors of expressed community diversity, pointing to the value of quantifying RNA, especially when ecological functioning is considered. PMID:28576763

Niche specialization of terrestrial archaeal ammonia oxidizers.

PubMed

Gubry-Rangin, Cécile; Hai, Brigitte; Quince, Christopher; Engel, Marion; Thomson, Bruce C; James, Phillip; Schloter, Michael; Griffiths, Robert I; Prosser, James I; Nicol, Graeme W

2011-12-27

Soil pH is a major determinant of microbial ecosystem processes and potentially a major driver of evolution, adaptation, and diversity of ammonia oxidizers, which control soil nitrification. Archaea are major components of soil microbial communities and contribute significantly to ammonia oxidation in some soils. To determine whether pH drives evolutionary adaptation and community structure of soil archaeal ammonia oxidizers, sequences of amoA, a key functional gene of ammonia oxidation, were examined in soils at global, regional, and local scales. Globally distributed database sequences clustered into 18 well-supported phylogenetic lineages that dominated specific soil pH ranges classified as acidic (pH <5), acido-neutral (5 ≤ pH <7), or alkalinophilic (pH ≥ 7). To determine whether patterns were reproduced at regional and local scales, amoA gene fragments were amplified from DNA extracted from 47 soils in the United Kingdom (pH 3.5-8.7), including a pH-gradient formed by seven soils at a single site (pH 4.5-7.5). High-throughput sequencing and analysis of amoA gene fragments identified an additional, previously undiscovered phylogenetic lineage and revealed similar pH-associated distribution patterns at global, regional, and local scales, which were most evident for the five most abundant clusters. Archaeal amoA abundance and diversity increased with soil pH, which was the only physicochemical characteristic measured that significantly influenced community structure. These results suggest evolution based on specific adaptations to soil pH and niche specialization, resulting in a global distribution of archaeal lineages that have important consequences for soil ecosystem function and nitrogen cycling.

Are there links between responses of soil microbes and ecosystem functioning to elevated CO2, N deposition and warming? A global perspective.

PubMed

García-Palacios, Pablo; Vandegehuchte, Martijn L; Shaw, E Ashley; Dam, Marie; Post, Keith H; Ramirez, Kelly S; Sylvain, Zachary A; de Tomasel, Cecilia Milano; Wall, Diana H

2015-04-01

In recent years, there has been an increase in research to understand how global changes' impacts on soil biota translate into altered ecosystem functioning. However, results vary between global change effects, soil taxa, and ecosystem processes studied, and a synthesis of relationships is lacking. Therefore, here we initiate such a synthesis to assess whether the effect size of global change drivers (elevated CO2, N deposition, and warming) on soil microbial abundance is related with the effect size of these drivers on ecosystem functioning (plant biomass, soil C cycle, and soil N cycle) using meta-analysis and structural equation modeling. For N deposition and warming, the global change effect size on soil microbes was positively associated with the global change effect size on ecosystem functioning, and these relationships were consistent across taxa and ecosystem processes. However, for elevated CO2, such links were more taxon and ecosystem process specific. For example, fungal abundance responses to elevated CO2 were positively correlated with those of plant biomass but negatively with those of the N cycle. Our results go beyond previous assessments of the sensitivity of soil microbes and ecosystem processes to global change, and demonstrate the existence of general links between the responses of soil microbial abundance and ecosystem functioning. Further we identify critical areas for future research, specifically altered precipitation, soil fauna, soil community composition, and litter decomposition, that are need to better quantify the ecosystem consequences of global change impacts on soil biodiversity. © 2014 John Wiley & Sons Ltd.

Consequences of using different soil texture determination methodologies for soil physical quality and unsaturated zone time lag estimates.

PubMed

Fenton, O; Vero, S; Ibrahim, T G; Murphy, P N C; Sherriff, S C; Ó hUallacháin, D

2015-11-01

Elucidation of when the loss of pollutants, below the rooting zone in agricultural landscapes, affects water quality is important when assessing the efficacy of mitigation measures. Investigation of this inherent time lag (t(T)) is divided into unsaturated (t(u)) and saturated (t(s)) components. The duration of these components relative to each other differs depending on soil characteristics and the landscape position. The present field study focuses on tu estimation in a scenario where the saturated zone is likely to constitute a higher proportion of t(T). In such instances, or where only initial breakthrough (IBT) or centre of mass (COM) is of interest, utilisation of site and depth specific "simple" textural class or actual sand-silt-clay percentages to generate soil water characteristic curves with associated soil hydraulic parameters is acceptable. With the same data it is also possible to estimate a soil physical quality (S) parameter for each soil layer which can be used to infer many other physical, chemical and biological quality indicators. In this study, hand texturing in the field was used to determine textural classes of a soil profile. Laboratory methods, including hydrometer, pipette and laser diffraction methods were used to determine actual sand-silt-clay percentages of sections of the same soil profile. Results showed that in terms of S, hand texturing resulted in a lower index value (inferring a degraded soil) than that of pipette, hydrometer and laser equivalents. There was no difference between S index values determined using the pipette, hydrometer and laser diffraction methods. The difference between the three laboratory methods on both the IBT and COM stages of t(u) were negligible, and in this instance were unlikely to affect either groundwater monitoring decisions, or to be of consequence from a policy perspective. When t(u) estimates are made over the full depth of the vadose zone, which may extend to several metres, errors resulting from the use of hydraulic parameters generated from hand texture data will be resultantly greater, and may lead to flawed predictions regarding the achievability of water policy targets. For this reason laboratory analysis, regardless of method, should be preferred to simple field assessments. Copyright © 2015 Elsevier B.V. All rights reserved.

Effects of cattle-slurry treatment by acidification and separation on nitrogen dynamics and global warming potential after surface application to an acidic soil.

PubMed

Fangueiro, David; Pereira, José; Bichana, André; Surgy, Sónia; Cabral, Fernanda; Coutinho, João

2015-10-01

Cattle-slurry (liquid manure) application to soil is a common practice to provide nutrients and organic matter for crop growth but it also strongly impacts the environment. The objective of the present study was to assess the efficiency of cattle-slurry treatment by solid-liquid separation and/or acidification on nitrogen dynamics and global warming potential (GWP) following application to an acidic soil. An aerobic laboratory incubation was performed over 92 days with a Dystric Cambisol amended with raw cattle-slurry or separated liquid fraction (LF) treated or not by acidification to pH 5.5 by addition of sulphuric acid. Soil mineral N contents and NH3, N2O, CH4 and CO2 emissions were measured. Results obtained suggest that the acidification of raw cattle-slurry reduced significantly NH3 emissions (-88%) but also the GWP (-28%) while increased the N availability relative to raw cattle-slurry (15% of organic N applied mineralised against negative mineralisation in raw slurry). However, similar NH3 emissions and GWP were observed in acidified LF and non-acidified LF treatments. On the other hand, soil application of acidified cattle-slurry rather than non-acidified LF should be preferred attending the lower costs associated to acidification compared to solid-liquid separation. It can then be concluded that cattle-slurry acidification is a solution to minimise NH3 emissions from amended soil and an efficient strategy to decrease the GWP associated with slurry application to soil. Furthermore, the more intense N mineralisation observed with acidified slurry should lead to a higher amount of plant available N and consequently to higher crop yields. Copyright © 2015 Elsevier Ltd. All rights reserved.

Microbial composition and diversity are associated with plant performance: a case study on long-term fertilization effect on wheat growth in an Ultisol.

PubMed

Li, Lihua; Fan, Fenliang; Song, Alin; Yin, Chang; Cui, Peiyuan; Li, Zhaojun; Liang, Yongchao

2017-06-01

The association between microbial communities and plant growth in long-term fertilization system has not been fully studied. In the present study, impacts of long-term fertilization have been determined on the size and activity of soil microbial communities and wheat performance in a red soil (Ultisol) collected from Qiyang Experimental Station, China. For this, different microbial communities originating from long-term fertilized pig manure (M), mineral fertilizer (NPK), pig manure plus mineral fertilizer (MNPK), and no fertilizer (CK) were used as inocula for the Ultisol tested. Changes in total bacterial and fungal community composition and structures using Ion Torrent sequencing were determined. The results show that the biomass of wheat was significantly higher in both sterilized soil inoculated with NPK (SNPK) and sterilized soil inoculated with MNPK (SMNPK) treatments than in other treatments (P < 0.05). The activities of β-1,4-N-acetylglucosaminidase (NAG) and cellobiohydrolase (CBH) were significantly correlated with wheat biomass. Among the microbial communities, the largest Ascomycota phylum in soils was negatively correlated with β-1,4-glucosidase (βG) (P < 0.05). The phylum Basidiomycota was negatively correlated with plant biomass (PB) and tillers per plant (TI) (P < 0.05). Nonmetric multidimensional scaling analysis shows that fungal community was strongly correlated with long-term fertilization strategy, while the bacterial community was strongly correlated with β-1,4-N-acetylglucosaminidase activity. According to the Mantel test, the growth of wheat was affected by fungal community. Taken together, microbial composition and diversity in soils could be a good player in predicting soil fertility and consequently plant growth.

Greenhouse gas emissions from soil under changing environmental conditions

USDA-ARS?s Scientific Manuscript database

This manuscript is the Guest Editors’ Introduction to a special issue on greenhouse gas emissions from agriculture. The papers were assembled following presentation at EuroSoil 2012. Exchange of greenhouse gases between soils and the atmosphere is a natural consequence of several ecosystem process...

Survival and leaching of fecal bacteria after slurry spreading on mountain hay meadows: consequences for the management of water contamination risk.

PubMed

Trevisan, D; Vansteelant, J Y; Dorioz, J M

2002-01-01

The aim of this work is to achieve a better understanding of the behavior of fecal coliform populations on the vegetation and in the soil after slurry spreading in environmental conditions, typical of vegetative growth period in mountain hay meadows. Changes in fecal coliform populations on the vegetation and in the soil were monitored in situ for 3 months after slurry spreading on 9 plots. The variations found in populations are related to the agricultural, soil. and climatic characteristics of plots and to the moisture regime of soils. These observations are compared with laboratory experiments on undisturbed soil microcosms. In absence of water flux, survival durations recorded in the laboratory and in the field are of the same order of magnitude. The data enable us to pinpoint the influence of various factors affecting the decline and transfer of fecal bacteria in the plant-soil system and consequently to discuss the risk management of water contamination by agriculture.

Shifting carbon flow from roots into associated microbial communities in response to elevated atmospheric CO2.

PubMed

Drigo, Barbara; Pijl, Agata S; Duyts, Henk; Kielak, Anna M; Gamper, Hannes A; Houtekamer, Marco J; Boschker, Henricus T S; Bodelier, Paul L E; Whiteley, Andrew S; van Veen, Johannes A; Kowalchuk, George A

2010-06-15

Rising atmospheric CO(2) levels are predicted to have major consequences on carbon cycling and the functioning of terrestrial ecosystems. Increased photosynthetic activity is expected, especially for C-3 plants, thereby influencing vegetation dynamics; however, little is known about the path of fixed carbon into soil-borne communities and resulting feedbacks on ecosystem function. Here, we examine how arbuscular mycorrhizal fungi (AMF) act as a major conduit in the transfer of carbon between plants and soil and how elevated atmospheric CO(2) modulates the belowground translocation pathway of plant-fixed carbon. Shifts in active AMF species under elevated atmospheric CO(2) conditions are coupled to changes within active rhizosphere bacterial and fungal communities. Thus, as opposed to simply increasing the activity of soil-borne microbes through enhanced rhizodeposition, elevated atmospheric CO(2) clearly evokes the emergence of distinct opportunistic plant-associated microbial communities. Analyses involving RNA-based stable isotope probing, neutral/phosphate lipid fatty acids stable isotope probing, community fingerprinting, and real-time PCR allowed us to trace plant-fixed carbon to the affected soil-borne microorganisms. Based on our data, we present a conceptual model in which plant-assimilated carbon is rapidly transferred to AMF, followed by a slower release from AMF to the bacterial and fungal populations well-adapted to the prevailing (myco-)rhizosphere conditions. This model provides a general framework for reappraising carbon-flow paths in soils, facilitating predictions of future interactions between rising atmospheric CO(2) concentrations and terrestrial ecosystems.

Species distributions in response to individual soil nutrients and seasonal drought across a community of tropical trees

PubMed Central

Condit, Richard; Engelbrecht, Bettina M. J.; Pino, Delicia; Pérez, Rolando; Turner, Benjamin L.

2013-01-01

Tropical forest vegetation is shaped by climate and by soil, but understanding how the distributions of individual tree species respond to specific resources has been hindered by high diversity and consequent rarity. To study species over an entire community, we surveyed trees and measured soil chemistry across climatic and geological gradients in central Panama and then used a unique hierarchical model of species occurrence as a function of rainfall and soil chemistry to circumvent analytical difficulties posed by rare species. The results are a quantitative assessment of the responses of 550 tree species to eight environmental factors, providing a measure of the importance of each factor across the entire tree community. Dry-season intensity and soil phosphorus were the strongest predictors, each affecting the distribution of more than half of the species. Although we anticipated clear-cut responses to dry-season intensity, the finding that many species have pronounced associations with either high or low phosphorus reveals a previously unquantified role for this nutrient in limiting tropical tree distributions. The results provide the data necessary for understanding distributional limits of tree species and predicting future changes in forest composition. PMID:23440213

Species distributions in response to individual soil nutrients and seasonal drought across a community of tropical trees.

PubMed

Condit, Richard; Engelbrecht, Bettina M J; Pino, Delicia; Pérez, Rolando; Turner, Benjamin L

2013-03-26

Tropical forest vegetation is shaped by climate and by soil, but understanding how the distributions of individual tree species respond to specific resources has been hindered by high diversity and consequent rarity. To study species over an entire community, we surveyed trees and measured soil chemistry across climatic and geological gradients in central Panama and then used a unique hierarchical model of species occurrence as a function of rainfall and soil chemistry to circumvent analytical difficulties posed by rare species. The results are a quantitative assessment of the responses of 550 tree species to eight environmental factors, providing a measure of the importance of each factor across the entire tree community. Dry-season intensity and soil phosphorus were the strongest predictors, each affecting the distribution of more than half of the species. Although we anticipated clear-cut responses to dry-season intensity, the finding that many species have pronounced associations with either high or low phosphorus reveals a previously unquantified role for this nutrient in limiting tropical tree distributions. The results provide the data necessary for understanding distributional limits of tree species and predicting future changes in forest composition.

Soil organic matter dynamics and mineral associations with depth across a toposequence from a Mediterranean grassland in Northern California

NASA Astrophysics Data System (ADS)

Kramer, M. G.; Yuen, W.

2013-12-01

The mechanisms governing soil carbon stabilization in Mediterranean grasslands are poorly understood. Consequently, how soil carbon will respond to climate change in these ecosystems, remains uncertain. We examined the distribution of carbon and it's relationship to soil mineralogy with depth across a sequence of topographic positions of grassland soils in the Central Valley of Northern California. We sampled representative 2 m deep soil cores at mid slope topopositions (resulting in 4 detailed 20 cm interval depth profiles), in conjunction with replicated 1 m deep soil profiles under two types of parent material; marine sandstone and loamy marine clay deposits. For sequentially deeper samples, we measured bulk density, particle size, soil pH, oxalate and citrate-dithionite extractable Fe, Al and Si. Inorganic and organic carbon content were determined by measuring bulk C and in the various size fractions with and without carbonate removal using a hydrochloric acid vacuum fumigation technique. C and N stable isotope ratios were also measured for both bulk and organic carbon. We found significant differences in total C storage, inorganic and organic C amount between topographic positions. Differences in pedogenic materials (oxalate and citrate-dithionate extractable Al, Fe and Si) and particle size distribution were also found. All topographic positions showed a decline in organic carbon content down to the measured depth of 2 m. South facing slopes contained a greater proportion of inorganic carbon throughout the depth profiles, declining with depth, whereas total C storage was greater on north facing slopes, where total annual above ground biomass was greater. Overall, carbon storage varied between inorganic to organic C form across the toposequence and with more or less direct association with pedogenic materials (oxalate and citrate-diothionite extractable) depending on landform position. We conclude that inorganic carbon storage may increase in these grassland soils, as climate warming occurs in the region, although the fate of organic C loss or storage remains less clear.

Cleaning and disinfection in home care: A comparison of 2 commercial products with potentially different consequences for respiratory health.

PubMed

Goodyear, Nancy; Markkanen, Pia; Beato-Melendez, Christian; Mohamed, Hagir; Gore, Rebecca; Galligan, Catherine; Sama, Susan; Quinn, Margaret

2018-04-01

Home care aides perform personal care and homemaking services in client homes, including cleaning and disinfection (C&D). Although C&D are performed to remove soil and dust, they are increasingly performed for infection prevention. Many C&D products contain respiratory irritants. The objective of this study was to evaluate 2 commercial products for C&D effectiveness on common household surfaces in seniors' homes. Two C&D visits were conducted in 46 seniors' homes. One visit applied a bleach-containing cleaning product and the other applied an environmentally preferable product. Before and after C&D, the study team performed organic soil bioluminometer measurements on surfaces and collected cotton swab and wipe samples for total bacteria count, Staphylococcus aureus, and Clostridium difficile identification. Both products removed microorganisms from tested surfaces. S aureus was found in 7 households, 1 strain of which was methicillin-resistant. Both products removed S aureus from all surfaces. Bleach-containing products removed somewhat more soil than environmentally preferable products, although results were statistically significant for only 1 surface. The study showed similar, not identical, C&D performance for 2 cleaning products with potentially different consequences for respiratory health. Additional research is needed to develop robust recommendations for safe, effective C&D in home care. Copyright © 2018 Association for Professionals in Infection Control and Epidemiology, Inc. Published by Elsevier Inc. All rights reserved.

The Development of Terrestrial Water Cycle Applications for SMAP Soil Moisture Data Products

USDA-ARS?s Scientific Manuscript database

Soil moisture storage sits at the locus of the terrestrial water cycle and governs the relative partitioning of precipitation into various land surface flux components. Consequently, improved observational constraint of soil moisture variations should improve our ability to globally monitor the te...

Applying Fingerprint Fourier Transformed Infrared Spectroscopy and Chemometrics to Assess Soil Ecosystem Disturbance and Recovery

USDA-ARS?s Scientific Manuscript database

The assessment and monitoring of soil ecosystem function has been hindered due to the shortcomings of many traditional analytical techniques (e.g., soil enzyme activities, microbial incubations), including: high cost, long time investment and difficulties with data interpretation. Consequently, ther...

Soil spectral characterization

NASA Technical Reports Server (NTRS)

Stoner, E. R.; Baumgardner, M. F.

1981-01-01

The spectral characterization of soils is discussed with particular reference to the bidirectional reflectance factor as a quantitative measure of soil spectral properties, the role of soil color, soil parameters affecting soil reflectance, and field characteristics of soil reflectance. Comparisons between laboratory-measured soil spectra and Landsat MSS data have shown good agreement, especially in discriminating relative drainage conditions and organic matter levels in unvegetated soils. The capacity to measure both visible and infrared soil reflectance provides information on other soil characteristics and makes it possible to predict soil response to different management conditions. Field and laboratory soil spectral characterization helps define the extent to which intrinsic spectral information is available from soils as a consequence of their composition and field characteristics.

Effects of exotic plantation forests on soil edaphon and organic matter fractions.

PubMed

Xu, Gang; Liu, Yao; Long, Zhijian; Hu, Shanglian; Zhang, Yuanbin; Jiang, Hao

2018-06-01

There is uncertainty and limited knowledge regarding soil microbial properties and organic matter fractions of natural secondary forest accompanying chemical environmental changes of replacement by pure alien plantation forests in a hilly area of southwest of Sichuan province China. The aim of this study was to evaluate the impact of natural secondary forest (NSF) to pure Cryptomeria fortunei forest (CFF) and Cunninghamia lanceolata forest (CLF) on soil organic fractions and microbial communities. The results showed that the soil total phospholipid fatty acids (PLFAs), total bacteria and fungi, microbial carbon pool, organic recalcitrant carbon (C) and (N) fractions, soil microbial quotient and labile and recalcitrant C use efficiencies in each pure plantation were significantly decreased, but their microbial N pool, labile C and N pools, soil carbon dioxide efflux, soil respiratory quotient and recalcitrant N use efficiency were increased. An RDA analysis revealed that soil total PLFAs, total bacteria and fungi and total Gram-positive and Gram-negative bacteria were significantly associated with exchangeable Al 3+ , exchangeable acid, Al 3+ , available P and Mg 2+ and pH, which resulted into microbial functional changes of soil labile and recalcitrant substrate use efficiencies. Modified microbial C- and N-use efficiency due to forest conversion ultimately meets those of rapidly growing trees in plantation forests. Enlarged soil labile fractions and soil respiratory quotients in plantation forests would be a potential positive effect for C source in the future forest management. Altogether, pure plantation practices could provoke regulatory networks and functions of soil microbes and enzyme activities, consequently leading to differentiated utilization of soil organic matter fractions accompanying the change in environmental factors. Copyright © 2018 Elsevier B.V. All rights reserved.

90Sr and 137Cs in environmental samples from Dolon near the Semipalatinsk Nuclear Test Site.

PubMed

Gastberger, M; Steinhäusler, F; Gerzabek, M H; Hubmer, A; Lettner, H

2000-09-01

The (90)Sr and (137)Cs activities of soil, plant, and milk samples from the village of Dolon, located close to the Semipalatinsk Nuclear Test Site in Kazakhstan, were determined. The areal deposition at the nine sampling sites is in the range of <500 to 6,100 Bq m(-2) and 300 to 7,900 Bq m-2 for (90)Sr and (137)Cs, respectively. Similar values have been reported in the literature. At some of the sites both nuclides mainly have remained in the top 6 cm of the soil profiles; at others they were partly transported into deeper soil layers since the deposition. For most of the samples the (90)Sr yield after destruction of the soil matrix is significantly higher than after extracting with 6 M HCl indicating that (90)Sr is partly associated with fused silicates. The low mean (90)Sr activity concentrations of vegetation samples (14 Bq kg(-1) dw) and milk samples (0.05 Bq kg(-1) fw) suggest that this has favorable consequences in terms of limiting its bioavailability.

Research on visible and near infrared spectral-polarimetric properties of soil polluted by crude oil

NASA Astrophysics Data System (ADS)

Shen, Hui-yan; Zhou, Pu-cheng; Pan, Bang-long

2017-10-01

Hydrocarbon contaminated soil can impose detrimental effects on forest health and quality of agricultural products. To manage such consequences, oil leak indicators should be detected quickly by monitoring systems. Remote sensing is one of the most suitable techniques for monitoring systems, especially for areas which are uninhabitable and difficulty to access. The most available physical quantities in optical remote sensing domain are the intensity and spectral information obtained by visible or infrared sensors. However, besides the intensity and wavelength, polarization is another primary physical quantity associated with an optical field. During the course of reflecting light-wave, the surface of soil polluted by crude oil will cause polarimetric properties which are related to the nature of itself. Thus, detection of the spectralpolarimetric properties for soil polluted by crude oil has become a new remote sensing monitoring method. In this paper, the multi-angle spectral-polarimetric instrument was used to obtain multi-angle visible and near infrared spectralpolarimetric characteristic data of soil polluted by crude oil. And then, the change rule between polarimetric properties with different affecting factors, such as viewing zenith angle, incidence zenith angle of the light source, relative azimuth angle, waveband of the detector as well as different grain size of soil were discussed, so as to provide a scientific basis for the research on polarization remote sensing for soil polluted by crude oil.

Plant and soil consequences of shrub management in a big sagebrush-dominated rangeland ecosystem

USDA-ARS?s Scientific Manuscript database

Soil organic carbon (SOC) responses to shrub management in western US rangelands, especially those dominated by Wyoming big sagebrush (Artemisia tridentata Nutt. ssp. wyomingensis Beetle & Young) in low rainfall areas (<300 mm), remains a major knowledge gap. We sampled vegetation and soils in 2009 ...

Soil Science Education: Philosophy and Perspectives. SSSA Special Publication Number 37.

ERIC Educational Resources Information Center

Baveye, Philippe, Ed.; And Others

Soil science provides the educational framework to integrate components of earth science systems, to understand the causes and consequences of spatial variability, and view dynamic processes impacting ecosystems in a holistic perspective. This book, a special publication of the Soil Science Society of America (SSSA), identifies and analyzes…

Corn stover harvest and tillage impacts on near-surface soil physical quality

USDA-ARS?s Scientific Manuscript database

Excessive harvest of corn (Zea mays L.) stover for ethanol production has raised concerns regarding negative consequences on soil physical quality. Our objective was to quantify the impact of two tillage practices and three levels of corn stover harvest on near-surface soil physical quality through ...

Long-term changes in the acidity of a dekalb forest soil in the mid-region of the Susquehanna River Watershed

Treesearch

Joy R. Robert; William E. Sharpe

1996-01-01

Forest soil acidification has been reported to result in reduced forest productivity and forest decline. Soil acidification and forest decline may trigger changes in nutrient cycling in forest ecosystems with important consequences for drainage water chemistry and aquatic biota.

Inactivation of Salmonella in Organic Soil by Cinnamaldehyde, Eugenol, Ecotrol, and Sporan

USDA-ARS?s Scientific Manuscript database

Salmonella can survive in soil for months to years; consequently, soil can be a preharvest source of contamination of produce. Elimination of Salmonella with natural products and processes such as essential oils is important to prevent infection among consumers. Essential oils have been mainly eval...

Mechanisms of soil degradation and consequences for carbon stocks on Tibetan grasslands

NASA Astrophysics Data System (ADS)

Kuzyakov, Yakov; Schleuss, Per-Marten; Miehe, Georg; Heitkamp, Felix; Sebeer, Elke; Spielvogel, Sandra; Xu, Xingliang; Guggenberger, Georg

2016-04-01

Tibetan grasslands provide tremendous sinks for carbon (C) and represent important grazing ground. Strong degradation - the destroying the upper root-mat/soil horizon of Kobresia pastures, has dramatic consequences for soil organic carbon (SOC) and nutrient storage. To demonstrate specific degradation patterns and elucidate mechanisms, as well as to assess consequences for SOC storage, we investigated a sequence of six degradation stages common over the whole Kobresia ecosystem. The soil degradation sequence consists of following mechanisms: Overgrazing and trampling by livestock provide the prerequisite for grassland degradation as both (a) cause plant dying, (b) reduce grassland recovery and (c) destroy protective Kobresia root-mats. These anthropogenic induced processes are amplified by naturally occurring degradation in harsh climate. The frequently repeated soil moisture and temperature fluctuations induce volume changes and tensions leading to polygonal cracking of the root mats. Then the plants die and erosion gradually extend the surface cracks. Soil erosion cause a high SOC loss from the upper horizons (0-10 cm: ~5.1 kg C m-2), whereas SOC loss beneath the surface cracks is caused by both, decreasing root C-input and SOC mineralization (SOC losses by mineralization: ~2.5 kg C m-2). Root biomass decreases with degradation and indicated lower C input. The negative δ13C shift of SOC reflects intensive decomposition and corresponds to a relative enrichment of 13C depleted lignin components. We conclude that the combined effects of overgrazing and harsh climate reduce root C input, increase SOC decomposition and initiate erosion leading to SOC loss up to 70% of intact soil (0-30 cm: ~7.6 kg C m-2). Consequently, a high amount of C is released back to the atmosphere as CO2, or is deposited in depressions and river beds creating a potential source of N2O and CH4. Concluding, anthropogenically induced overgrazing makes the Kobresia root-mat sensitive to natural degradation processes and lead to strong up to complete destroying of soils and so, of pastures ground and ecosystems on Tibetan plateau.

Patterns of Mineral Soil Nitrate Retention with Forest Age

NASA Astrophysics Data System (ADS)

Fuss, C. B.; Lovett, G. M.; Goodale, C. L.; Ollinger, S. V.; Lang, A.; Ouimette, A.

2016-12-01

Atmospheric deposition of nitrogen (N) has been elevated in the northeastern U.S. for decades and many of the region's forests have reached mature biomass and no longer have net N demands, leading biogeochemical models to predict increasing nitrate (NO3-) losses from forested watersheds. However, long-term monitoring at the Hubbard Brook Experimental Forest in New Hampshire shows an unexpected decline in stream NO3- concentrations in recent years, and suggests that poorly understood processes of retention in mineral soils may contribute to this pattern. The mineral soil is a large and heterogeneous pool of N, making changes with time difficult to quantify. We hypothesized that a reaccumulation of N in mineral soil organic matter in successional and recently matured forests is in part leading to current low NO3- losses. We used a chronosequence of four replicated forest age classes, ranging from young ( 25 y) to old growth (>200 y since disturbance) in the White Mountain region of New Hampshire to study how site age affects NO3- retention in mineral soil. We applied a 15NO3- tracer to the surface of the mineral soil beneath the forest floor and tracked the total recovery of 15N, as well as its distribution between particulate and mineral-associated (<53 mm) organic matter fractions, in the top 10 cm of mineral soil over the course of five weeks. We found the highest retention of 15N in the recently matured forests ( 100 y old), consistent with our hypothesis. Retention in the soil pool was lower in younger forests, likely due to greater root uptake to supply growth demands. The soils of the old growth forests retained low amounts of the tracer, suggesting that they are closer to N saturation. We found 15N in the mineral-associated fraction after 2 days, indicating that some NO3- is either abiotically incorporated into stabilized organic matter, or immobilized by microbes associated with mineral surfaces. We seek to combine these results with more detailed organic matter analyses to better understand these processes. Overall, our results indicate that retention of N in mineral soil layers is an important process dependent on forest age and can better inform biogeochemical models and consequently our ability to predict nutrient retention and water quality in forested watersheds.

Review of municipal sludge use as a soil amendment on disturbed lands

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brandt, C.A.; Hendrickson, P.L.

1990-08-01

The US Department of Energy is examining options of improving soil conditions at Hanford reclamation sites. One promising technology is the incorporation of municipal sewage sludge into the soil profile. This report reviews the potential benefits and adverse consequences of sludge use in land reclamation. Land reclamation comprises those activities instigated to return a mechanically disturbed site to some later successional state. Besides the introduction of suitable plant species to disturbed lands, reclamation generally requires measures to enhance long-term soil nutrient content, moisture retention or drainage, and mitigation of toxic effects from metals and pH. One of the more effectivemore » means of remediating adverse soil characteristics is the application of complex organic manures such as municipal sewage sludge. Sewage sludges contain complete macro- and micronutrients necessary to sustain plant growth. The application of sewage sludge may reestablish microbial activity in sterile soils. Physical properties, such as water-holding capacity and percentage water-stable aggregates, also improve with the addition of sewage sludge. Sludge applications may also increase the rate of degradation of some hydrocarbon pollutants in soils. Potential adverse impacts associated with the application of sewage sludge to land include negative public perception of human waste products; concerns regarding pathogen buildup and spread in the soils, plants, and water; entrance and accumulation of heavy metals in the food chain; salt accumulation in the soil and ground water; leaching of nitrates into ground water; and accumulation of other potentially toxic substances, such as boron and synthetic hydrocarbons, in the soil, plants, and food chain. 56 refs., 10 tabs.« less

Ceres model application for increasing preparedness to climate variability in agricultural planning

NASA Astrophysics Data System (ADS)

Popova, Z.; Kercheva, M.

2003-04-01

The paper should demonstrate how knowledge of climate variability and simulation analyses over 30 years could be used to study the vulnerability of maize and wheat ecosystems in the region of Sofia. The procedure of stepwise calibration and validation of agricultural simulation CERES-maize and CERES-wheat models was used at two fields of contrastive soil conditions (Chromic Luvisol and Vertisol). Lysimeters observations under "Chromic Luvisol-maize" combination enabled to test integrally the prediction capacity of CERES-maize, including water and nitrogen fluxes at the boundaries of this vulnerable system over "1.05.1997-1.10.1999" period. The role of soil, crop, climate and irrigation scheduling (under maize only) on drought consequences and groundwater pollution was quantified for four "soil-crop" combinations by CERES models. Four water supply treatments of maize were considered on both soils: one under rainfed conditions and three with varied irrigation application. Water application in initial, development, and mid season growth stages was scheduled by CROPWAT model at any day that soil matrix suction fell to 3.0-3.2 pF with one irrigation scenario and 2.4-2.6 pF with another one. The third drainage-controlling scenario was developed on the basis of 50-75% of the required irrigation depth by satisfying most sensible phases of maize. It was established that "Chromic Luvisol -maize - dry land" combination was associated with the greatest coefficient of variability of yields (Cv=42%) and drought frequency (75% of the years with yield losses more than 20%). Average yield losses in dry vegetation seasons were 60% of the productivity potential under sufficient soil moisture. As a consequence maize cultivation under these conditions was inefficient in 20% of the years when production expenses were greater than losses. Any irrigation practice, even the drainage controlling scenario, mitigated drought consequences on risky soils as Chromic Luvisol by reducing year-to-year variability of yield (CV=5.6-6%). Long-term wheat yields were much more stable (CV=17-23% on Chromic Luvisol) than those of maize. In this case droughts covered 40% of the years when yield losses were 25-30% on the average. Soils of high water holding capacity (as Vertisol) provided additionally 50-150mm-water storage for evapotranspiration and thus reduced frequency of drought under both crops to 20-25% of the years. Agriculture on this soil should be more sustainable (CV=8-8.5% for yield under wheat and CV=14.6% respectively under maize). Reduction of yield during dry vegetation periods was 10-15% under wheat and 22% under maize if compared with productivity under sufficient soil water. Risk assessment of groundwater pollution showed that N-leaching hazards were associated mostly with moderately permeable Chromic Luvisol and high precipitation during the periods of low transpiration rate of both crops. Frequency analyses of seasonal N- losses, proved that half of the wheat and 3% of maize vegetation seasons were susceptible to significant N-leaching (10-45 kg N/ha for "N200" fertilization level) on Chromic Luvisol. Simulated irrigation scenarios did not influence vegetation drainage. Another risky situations occurred in 3% of the years of wet fallow after dry rainfed maize vegetation when up to 30% of fertilization dose might be leached on Chromic Luvisol. Earlier wheat sowing (on the 1st of October) and adjusted fertilization rates and timing to maximum N-uptake under both crops mitigated environmental hazards. Drainage-controlling irrigation scheduling decreased maize fallow state drainage by 30-40 % in half of the years and proved to be economically optimal. Such measure though may tend to increase vulnerability of ecosystem to climate variability by increasing residual soil nitrogen at the end of vegetation.

Application of soil quality indices to assess the status of agricultural soils irrigated with treated wastewaters

NASA Astrophysics Data System (ADS)

Morugán-Coronado, A.; Arcenegui, V.; García-Orenes, F.; Mataix-Solera, J.; Mataix-Beneyto, J.

2012-12-01

The supply of water is limited in some parts of the Mediterranean region, such as southeastern Spain. The use of treated wastewater for the irrigation of agricultural soils is an alternative to using better-quality water, especially in semi-arid regions. On the other hand, this practice can modify some soil properties, change their relationships, the equilibrium reached and influence soil quality. In this work two soil quality indices were used to evaluate the effects of irrigation with treated wastewater in soils. The indices were developed studying different soil properties in undisturbed soils in SE Spain, and the relationships between soil parameters were established using multiple linear regressions. This study was carried out in three areas of Alicante Province (SE Spain) irrigated with wastewater, including four study sites. The results showed slight changes in some soil properties as a consequence of irrigation with wastewater, the obtained levels not being dangerous for agricultural soils, and in some cases they could be considered as positive from an agronomical point of view. In one of the study sites, and as a consequence of the low quality wastewater used, a relevant increase in soil organic matter content was observed, as well as modifications in most of the soil properties. The application of soil quality indices indicated that all the soils of study sites are in a state of disequilibrium regarding the relationships between properties independent of the type of water used. However, there were no relevant differences in the soil quality indices between soils irrigated with wastewater with respect to their control sites for all except one of the sites, which corresponds to the site where low quality wastewater was used.

Niche specialization of terrestrial archaeal ammonia oxidizers

PubMed Central

Gubry-Rangin, Cécile; Hai, Brigitte; Quince, Christopher; Engel, Marion; Thomson, Bruce C.; James, Phillip; Schloter, Michael; Griffiths, Robert I.; Prosser, James I.; Nicol, Graeme W.

2011-01-01

Soil pH is a major determinant of microbial ecosystem processes and potentially a major driver of evolution, adaptation, and diversity of ammonia oxidizers, which control soil nitrification. Archaea are major components of soil microbial communities and contribute significantly to ammonia oxidation in some soils. To determine whether pH drives evolutionary adaptation and community structure of soil archaeal ammonia oxidizers, sequences of amoA, a key functional gene of ammonia oxidation, were examined in soils at global, regional, and local scales. Globally distributed database sequences clustered into 18 well-supported phylogenetic lineages that dominated specific soil pH ranges classified as acidic (pH <5), acido-neutral (5≤ pH <7), or alkalinophilic (pH ≥7). To determine whether patterns were reproduced at regional and local scales, amoA gene fragments were amplified from DNA extracted from 47 soils in the United Kingdom (pH 3.5–8.7), including a pH-gradient formed by seven soils at a single site (pH 4.5–7.5). High-throughput sequencing and analysis of amoA gene fragments identified an additional, previously undiscovered phylogenetic lineage and revealed similar pH-associated distribution patterns at global, regional, and local scales, which were most evident for the five most abundant clusters. Archaeal amoA abundance and diversity increased with soil pH, which was the only physicochemical characteristic measured that significantly influenced community structure. These results suggest evolution based on specific adaptations to soil pH and niche specialization, resulting in a global distribution of archaeal lineages that have important consequences for soil ecosystem function and nitrogen cycling. PMID:22158986

Changes in soil carbon cycling accompanying conversion of row-crop fields to grazing dairy pastures

NASA Astrophysics Data System (ADS)

Thompson, A.; Kramer, M. G.; Hill, N.; Machmuller, M. B.; Cyle, K.

2011-12-01

Increasingly, the dairy industry in the eastern US is transitioning from total confinement dairy systems (TCD) toward pasture-based, management intensive grazing dairy (MiGD) systems. This transition is driven by the fact that MiGDs require substantially less operating capital and are more economically efficient than TCD systems. Consequently, the impact of this transition and shift in land-use practice on carbon dynamics may be considerable. Land-use in a Management intensive Grazing Dairy (MiGD) system is fundamentally different than conventional confinement dairies and conventional no-till pastures. The forage system involves rotational grazing at optimal digestibility, when the plants are immature (~20-days) and consequently protein-rich. MiGD cows spend >90% of their time in the field and deposit > 90% of their waste directly to the soil surface. Thus, little above ground plant residues are directly returned to the soil, but rather substantial C inputs derive from bovine manure. We sampled a MiGD-chronosequence of row-crop to MiGD conversion established in 2007 in eastern Georgia. All soils across the MiGD-chronosequence, all occur in relative (40 km) close proximity to one another, are deep, well-drained, fine and fine sandy loam Ultisols formed on Coastal Plain sediments. Prior to MiGD established, the soils were farmed for > 50 yrs using conventional tillage techniques. Our current sampling to 1m depths captures fields at 0, 2, 3, and 5 yrs since conversion. Total soil carbon (C) and the carbon concentration of the clay fraction increased following conversion, with the greatest increases occurring between 3 and 5 yrs since conversion. These C increases were limited to the upper 40cm of the soil, with minimal change occurring at depth. Characterization of the protein and ligand content of these soils via 13C NMR and chemolytic techniques as a function of soil particle density and size is in progress and will be presented along with estimates of carbon dioxide and methane fluxes across the MiGD chronosequence. Our broad goal is to quantify ruminal methane emissions and changes to soil C-stocks and stability associated with this land-use shift. Our preliminary data suggest such a land-use change will likely improve soil health and increase C-stocks. Balancing this against potential increases in methane emissions is a key knowledge gap for future southeastern U.S. C-cycling estimates.

Soil variability along a nitrogen mineralization and nitrification gradient in a nitrogen-saturated hardwood forest

Treesearch

Frank S. Gilliam; Nikki L. Lyttle; Ashley Thomas; Mary Beth Adams

2005-01-01

Some N-saturated watersheds of the Fernow Experimental Forest (FEF), West Virginia, exhibit a high degree of spatial heterogeneity in soil N processing. We used soils from four sites at FEF representing a gradient in net N mineralization and nitrification to consider the causes and consequences of such spatial heterogeneity. We collected soils with extremely high vs....

Biogeochemical Research Priorities for Sustainable Biofuel and Bioenergy Feedstock Production in the Americas.

PubMed

Gollany, Hero T; Titus, Brian D; Scott, D Andrew; Asbjornsen, Heidi; Resh, Sigrid C; Chimner, Rodney A; Kaczmarek, Donald J; Leite, Luiz F C; Ferreira, Ana C C; Rod, Kenton A; Hilbert, Jorge; Galdos, Marcelo V; Cisz, Michelle E

2015-12-01

Rapid expansion in biomass production for biofuels and bioenergy in the Americas is increasing demand on the ecosystem resources required to sustain soil and site productivity. We review the current state of knowledge and highlight gaps in research on biogeochemical processes and ecosystem sustainability related to biomass production. Biomass production systems incrementally remove greater quantities of organic matter, which in turn affects soil organic matter and associated carbon and nutrient storage (and hence long-term soil productivity) and off-site impacts. While these consequences have been extensively studied for some crops and sites, the ongoing and impending impacts of biomass removal require management strategies for ensuring that soil properties and functions are sustained for all combinations of crops, soils, sites, climates, and management systems, and that impacts of biomass management (including off-site impacts) are environmentally acceptable. In a changing global environment, knowledge of cumulative impacts will also become increasingly important. Long-term experiments are essential for key crops, soils, and management systems because short-term results do not necessarily reflect long-term impacts, although improved modeling capability may help to predict these impacts. Identification and validation of soil sustainability indicators for both site prescriptions and spatial applications would better inform commercial and policy decisions. In an increasingly inter-related but constrained global context, researchers should engage across inter-disciplinary, inter-agency, and international lines to better ensure the long-term soil productivity across a range of scales, from site to landscape.

Remediation approaches for polycyclic aromatic hydrocarbons (PAHs) contaminated soils: Technological constraints, emerging trends and future directions.

PubMed

Kuppusamy, Saranya; Thavamani, Palanisami; Venkateswarlu, Kadiyala; Lee, Yong Bok; Naidu, Ravi; Megharaj, Mallavarapu

2017-02-01

For more than a decade, the primary focus of environmental experts has been to adopt risk-based management approaches to cleanup PAH polluted sites that pose potentially destructive ecological consequences. This focus had led to the development of several physical, chemical, thermal and biological technologies that are widely implementable. Established remedial options available for treating PAH contaminated soils are incineration, thermal conduction, solvent extraction/soil washing, chemical oxidation, bioaugmentation, biostimulation, phytoremediation, composting/biopiles and bioreactors. Integrating physico-chemical and biological technologies is also widely practiced for better cleanup of PAH contaminated soils. Electrokinetic remediation, vermiremediation and biocatalyst assisted remediation are still at the development stage. Though several treatment methods to remediate PAH polluted soils currently exist, a comprehensive overview of all the available remediation technologies to date is necessary so that the right technology for field-level success is chosen. The objective of this review is to provide a critical overview in this respect, focusing only on the treatment options available for field soils and ignoring the spiked ones. The authors also propose the development of novel multifunctional green and sustainable systems like mixed cell culture system, biosurfactant flushing, transgenic approaches and nanoremediation in order to overcome the existing soil- contaminant- and microbial-associated technological limitations in tackling high molecular weight PAHs. The ultimate objective is to ensure the successful remediation of long-term PAH contaminated soils. Copyright © 2016 Elsevier Ltd. All rights reserved.

Reductive dissolution of As(V)-Fe oxyhydroxides: an experimental insight at biogeochemical interfaces in soil

NASA Astrophysics Data System (ADS)

Dia, A.; Davranche, M.; Fakih, M.; Nowack, B.; Morin, G.; Gruau, G.

2009-04-01

Iron (III) oxides are ubiquitous components of soils, sediments, aquifers and geological materials. Trace metals associate with Fe (III) oxides as adsorbed or co-precipitated species and, consequently the biogeochemical cycles of Fe and trace metals are closely linked. Using a new monitoring tool recently developed, this study was dedicated to understand how do interplay biological and mineralogical (crystallographic and specific surface area) controls in the Fe oxyhydroxide reductive dissolution within soils and which can be the consequences on associated trace metal release. For this purpose, polymer slides covered by synthetic As-spiked ferrihydrite (As-Fh) or As-spiked lepidocrocite (As-Lp) were inserted into an organic-rich wetland soil in non conventional columns system under anaerobic conditions. This technique was developed to allow the insertion of slides into a structured soil without significant disturbance and to avoid the mechanical abrasion of oxides from slides that would occur in an equilibrium batch system under stirring. Slides were recovered after different periods of time to evaluate (i) the impact of (bio)reduction on both Fe-oxide dissolution and secondary mineral precipitation and, (ii) the subsequent effects on As mobility. XRF analyses of the slides were conducted before and after contact with the soil to determine the amount of Fe and associated As remaining on the slides. Fe(II), acetate, nitrate, sulphate and total metals of the soil solution was followed through time by ion chromatography and ICP-MS measurements. The important bacterial colonization and occurrence of biofilm evidenced by SEM analyses of the slides suggested the presence of biologically mediated processes. As previously shown elsewhere the kinetics of the suspected occurring bacterial reduction differ significantly from abiotic reduction data from literature. The important point is that conversely to what has been observed in published experimental data, the dissolution rates remained here fairly constant through time since the organic matter present in the interacting solution complexed the released Fe(II), which was therefore not able to accumulate onto the bacterial cell surfaces. The organic matter mediated complexation of Fe(II) prevented thus the progressive inhibition of the enzymatic reduction to occur as elsewhere evidenced with other experimental conditions. As expected, the reductive dissolution of the less crystallized ferrihydrite started quicker than that of lepidocrocite. The newly formed minerals were mostly composed of Fe-sulphides. Iron(II) complexation by organic molecules in solution likely prevented formation of secondary Fe(II, III)-rich minerals. The relative proportion of As(III) increased with time on the As-Fh slides, and was combined with a decrease of the Fe/As ratio, suggesting a partial adsorption of As(III) onto minerals. By contrast, for lepidocrocite, the Fe/As ratio increased, suggesting that As(III) was less readsorbed due the lower available site number and the deletion of As adsorption sites on the reduced lepidocrocite surface. Only a weak proportion of As(III) was sequestered by readsorption onto unreduced Fe-oxides and possibly on secondary Fe-sulphide minerals, especially when the iron oxide had a low surface area. Therefore, wetlands and their waterlogged soils could be a non negligible source of As within soils, migrating first through soil solutions and then to the whole hydrosystem.

Simulation of Soil-Plant Nitrogen Interactions for Educational Purposes.

ERIC Educational Resources Information Center

Huck, M. G.; Hoeft, R. G.

1994-01-01

Describes a computer model characterizing the balance of soil-plant Nitrogen that allows students to see the likely consequences of different biological and weather-related parameters. Proposes three uses for the model: (1) orienting beginning students to understand the soil Nitrogen cycle; (2) providing information for advanced students; and (3)…

Landscape determinants of exchangeable calcium and magnesium in Ozark Highland forest soils

Treesearch

John M. Kabrick; Keith W. Goyne; Zhaofei Fan; Dennis Meinert

2011-01-01

Exchangeable base cations, particularly Ca and Mg, largely govern soil acidity and, consequently, plant species composition in temperate forests. Although studies have identified soil and terrain characteristics affecting exchangeable Ca and Mg, few studies have identified the relative importance of factors affecting Ca and Mg distribution across landscapes. Objectives...

Maize, switchgrass, and ponderosa pine biochar added to soil increased herbicide sorption and decreased herbicide efficacy

USDA-ARS?s Scientific Manuscript database

Biochars, a by-product of pyrolysis conversion of a wide array of plant biomass to biofuels, are being considered as soil amendments that may provide nutrients and increase soil water holding capacity. However, there may be unintended consequences to other crop management practices. We examined her...

The impact of corn stover removal on N2O emission and soil respiration: An investigation with automated chambers

USDA-ARS?s Scientific Manuscript database

Corn stover removal, whether for silage, bedding, or bioenergy production, could have a variety of environmental consequences through its effect on soil processes, particularly N2O production and soil respiration. Because these effects may be episodic in nature, weekly snapshots with static chambers...

Maize varieties released in different eras have similar root length density distributions in the soil, which are negatively correlated with local concentrations of soil mineral nitrogen.

PubMed

Ning, Peng; Li, Sa; White, Philip J; Li, Chunjian

2015-01-01

Larger, and deeper, root systems of new maize varieties, compared to older varieties, are thought to have enabled improved acquisition of soil resources and, consequently, greater grain yields. To compare the spatial distributions of the root systems of new and old maize varieties and their relationships with spatial variations in soil concentrations of available nitrogen (N), phosphorus (P) and potassium (K), two years of field experiments were performed using six Chinese maize varieties released in different eras. Vertical distributions of roots, and available N, P and K in the 0-60 cm soil profile were determined in excavated soil monoliths at silking and maturity. The results demonstrated that new maize varieties had larger root dry weight, higher grain yield and greater nutrient accumulation than older varieties. All varieties had similar total root length and vertical root distribution at silking, but newer varieties maintained greater total root length and had more roots in the 30-60 cm soil layers at maturity. The spatial variation of soil mineral N (Nmin) in each soil horizon was larger than that of Olsen-P and ammonium-acetate-extractable K, and was inversely correlated with root length density (RLD), especially in the 0-20 cm soil layer. It was concluded that greater acquisition of mineral nutrients and higher yields of newer varieties were associated with greater total root length at maturity. The negative relationship between RLD and soil Nmin at harvest for all varieties suggests the importance of the spatial distribution of the root system for N uptake by maize.

Maize Varieties Released in Different Eras Have Similar Root Length Density Distributions in the Soil, Which Are Negatively Correlated with Local Concentrations of Soil Mineral Nitrogen

PubMed Central

Ning, Peng; Li, Sa; White, Philip J.; Li, Chunjian

2015-01-01

Larger, and deeper, root systems of new maize varieties, compared to older varieties, are thought to have enabled improved acquisition of soil resources and, consequently, greater grain yields. To compare the spatial distributions of the root systems of new and old maize varieties and their relationships with spatial variations in soil concentrations of available nitrogen (N), phosphorus (P) and potassium (K), two years of field experiments were performed using six Chinese maize varieties released in different eras. Vertical distributions of roots, and available N, P and K in the 0–60 cm soil profile were determined in excavated soil monoliths at silking and maturity. The results demonstrated that new maize varieties had larger root dry weight, higher grain yield and greater nutrient accumulation than older varieties. All varieties had similar total root length and vertical root distribution at silking, but newer varieties maintained greater total root length and had more roots in the 30–60 cm soil layers at maturity. The spatial variation of soil mineral N (Nmin) in each soil horizon was larger than that of Olsen-P and ammonium-acetate-extractable K, and was inversely correlated with root length density (RLD), especially in the 0–20 cm soil layer. It was concluded that greater acquisition of mineral nutrients and higher yields of newer varieties were associated with greater total root length at maturity. The negative relationship between RLD and soil Nmin at harvest for all varieties suggests the importance of the spatial distribution of the root system for N uptake by maize. PMID:25799291

Evaluating the influence of antecedent soil moisture on variability of the North American Monsoon precipitation in the coupled MM5/VIC modeling system

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhu, Chunmei; Leung, Lai R.; Gochis, David

2009-11-29

The influence of antecedent soil moisture on North American monsoon system (NAMS) precipitation variability was explored using the MM5 mesoscale model coupled with the Variable Infiltration Capacity (VIC) land surface model. Sensitivity experiments were performed with extreme wet and dry initial soil moisture conditions for both the 1984 wet monsoon year and the 1989 dry year. The MM5-VIC model reproduced the key features of NAMS in 1984 and 1989 especially over northwestern Mexico. Our modeling results indicate that the land surface has memory of the initial soil wetness prescribed at the onset of the monsoon that persists over most ofmore » the region well into the monsoon season (e.g. until August). However, in contrast to the classical thermal contrast concept, where wetter soils lead to cooler surface temperatures, less land-sea thermal contrast, weaker monsoon circulations and less precipitation, the coupled model consistently demonstrated a positive soil moisture – precipitation feedback. Specifically, anomalously wet premonsoon soil moisture always lead to enhanced monsoon precipitation, and the reverse was also true. The surface temperature changes induced by differences in surface energy flux partitioning associated with pre-monsoon soil moisture anomalies changed the surface pressure and consequently the flow field in the coupled model, which in turn changed moisture convergence and, accordingly, precipitation patterns. Both the largescale circulation change and local land-atmospheric interactions in response to premonsoon soil moisture anomalies play important roles in the coupled model’s positive soil moisture monsoon precipitation feedback. However, the former may be sensitive to the strength and location of the thermal anomalies, thus leaving open the possibility of both positive and negative soil moisture precipitation feedbacks.« less

Changes in soil moisture drive soil methane uptake along a fire regeneration chronosequence in a eucalypt forest landscape.

PubMed

Fest, Benedikt; Wardlaw, Tim; Livesley, Stephen J; Duff, Thomas J; Arndt, Stefan K

2015-11-01

Disturbance associated with severe wildfires (WF) and WF simulating harvest operations can potentially alter soil methane (CH4 ) oxidation in well-aerated forest soils due to the effect on soil properties linked to diffusivity, methanotrophic activity or changes in methanotrophic bacterial community structure. However, changes in soil CH4 flux related to such disturbances are still rarely studied even though WF frequency is predicted to increase as a consequence of global climate change. We measured in-situ soil-atmosphere CH4 exchange along a wet sclerophyll eucalypt forest regeneration chronosequence in Tasmania, Australia, where the time since the last severe fire or harvesting disturbance ranged from 9 to >200 years. On all sampling occasions, mean CH4 uptake increased from most recently disturbed sites (9 year) to sites at stand 'maturity' (44 and 76 years). In stands >76 years since disturbance, we observed a decrease in soil CH4 uptake. A similar age dependency of potential CH4 oxidation for three soil layers (0.0-0.05, 0.05-0.10, 0.10-0.15 m) could be observed on incubated soils under controlled laboratory conditions. The differences in soil CH4 uptake between forest stands of different age were predominantly driven by differences in soil moisture status, which affected the diffusion of atmospheric CH4 into the soil. The observed soil moisture pattern was likely driven by changes in interception or evapotranspiration with forest age, which have been well described for similar eucalypt forest systems in south-eastern Australia. Our results imply that there is a large amount of variability in CH4 uptake at a landscape scale that can be attributed to stand age and soil moisture differences. An increase in severe WF frequency in response to climate change could potentially increase overall forest soil CH4 sinks. © 2015 John Wiley & Sons Ltd.

Evolution of the Crop Rhizosphere: Impact of Domestication on Root Exudates in Tetraploid Wheat (Triticum turgidum L.)

PubMed Central

Iannucci, Anna; Fragasso, Mariagiovanna; Beleggia, Romina; Nigro, Franca; Papa, Roberto

2017-01-01

Domestication has induced major genetic changes in crop plants to satisfy human needs and as a consequence of adaptation to agroecosystems. This adaptation might have affected root exudate composition, which can influence the interactions in the rhizosphere. Here, using two different soil types (sand, soil), we provide an original example of the impact of domestication and crop evolution on root exudate composition through metabolite profiling of root exudates for a panel of 10 wheat genotypes that correspond to the key steps in domestication of tetraploid wheat (wild emmer, emmer, durum wheat). Our data show that soil type can dramatically affect the composition of root exudates in the rhizosphere. Moreover, the composition of the rhizosphere metabolites is associated with differences among the genotypes of the wheat domestication groups, as seen by the high heritability of some of the metabolites. Overall, we show that domestication and breeding have had major effects on root exudates in the rhizosphere, which suggests the adaptive nature of these changes. PMID:29326736

Transformation of nanosilver in oxidized and reduced soils

NASA Astrophysics Data System (ADS)

Hashimoto, Y.; Mitsunobu, S.; Yamaguchi, N.

2013-12-01

A recent development in the manufacturing of consumer products has been the incorporation of nano-sized (< 100 nm) particles. Because of their antimicrobial properties, Ag nanoparticles (NPs) have been used in many purposes including medical devices, foodstorage containers, soaps and sanitizers, wound dressings, and fabrics. Textiles enhanced with AgNPs (e.g., socks) may leach Ag(I) and nanoparticles as they are washed. These nanoparticles are either deposited directly to land or gradually washed away in household wastewater. The AgNPs, similar to Ag(I), will partition to sludge in a wastewater treatment plant, and the sewage sludge may be applied as a land amendment to agricultural fields and urban landscapes. As a consequence, the concentration of Ag in soils can increase gradually for a long period of Ag-containing sludge. Because of their antimicrobial properties, the presence of Ag in the soil adversely affects soil's biologically-mediated functions such as nutrient cycling. In many of previous studies, however, it was not clear if toxicity was caused by the AgNPs themselves or Ag ions released as the result of oxidation and dissolution. Also, mobility and fate of Ag in the environment remain little known. To understand toxicological properties and fate of Ag in soils, chemical speciation of Ag is the critical information. The objective of this study was to determine chemical speciation of Ag derived from AgNP (Ago) and Ag chemicals (AgNO3) in oxidized and reduced soils. We employed X-ray absorption fine structure (XAFS) spectroscopy to identify Ag species and probable hosting phases in soils, and the study was focused on how the soil redox condition transforms AgNP into Ag(I) and vice versa. A soil incubation study was conducted using a volcanic ash soil amended with AgNO3 and AgNPs up to the levels of 1000 mg kg-1 soil. The soil water content was adjusted to the levels of field capacity (oxidized) and saturated (reduced) condition. After 30 days of incubation at 25 C, the soils were collected and analyzed for Ag by sequential extraction and Ag K-edge XAFS spectroscopy. To find probable Ag species in the soils, linear combination fitting was performed on Ag EXAFS data of soils using known reference Ag chemicals and sorption phases. According to the EXAFS analysis, AgNO3 did not exist and was transformed into humus and phyllosilicate-associated phases in the oxidized soil. In the reduced soils, AgNO3 was completely transformed into other compounds including Ago and Ag associated with soil colloids (phyllosilicate and gibbsite). The redox potential of this soil remained oxic levels (457 mV) due to extremely high Ag+ concentration, and the redox condition was not low enough to form sulfide Ag species. About 90% of AgNPs remained persistent in the oxidized soil. In contrast, AgNPs was transformed mainly into Ag2S in the reduced soil. Our study found that AgNPs remained persistent in oxidized soils but can be transformed into sulfide-associated forms in reduced soils.

Unintended consequences of carbon enhancement in agricultural soils: The N2O problem

NASA Astrophysics Data System (ADS)

Venterea, R. T.; Breuillin-Sessoms, F.; Baker, J. M.; Griffis, T. J.; Spokas, K.; Turner, P. A.

2016-12-01

The potential of agricultural soils to accumulate C as a means of removing greenhouse gases (GHGs) from the atmosphere is complicated by the inherent coupling of the C and N cycles in soil. Practices that increase soil C content can have the unintended consequence of stimulating N mineralization, nitrification and/or denitrification; which can in turn promote production of N2O as well as other forms of reactive N that can be later transformed to N2O. These effects, combined with the large global warming potential of N2O, may partially or completely offset any gains in soil C from a GHG accounting perspective. Thus, ideally, management of soil C and N must be considered together in attempts to reduce net GHG budgets. However, the knowledge base for defining practices that optimize management of soil C and N together is still quite limited. In this presentation, we will illustrate these challenges with results from several recent studies examining effects of tillage, cover crops, biochar and other practices which aim to enhance soil C. Interactions of these practices with N management, climate, and other factors and their effects on N2O will be discussed with implications for improved management and future research.

Transition Metal Transport in Plants and Associated Endosymbionts: Arbuscular Mycorrhizal Fungi and Rhizobia

PubMed Central

González-Guerrero, Manuel; Escudero, Viviana; Saéz, Ángela; Tejada-Jiménez, Manuel

2016-01-01

Transition metals such as iron, copper, zinc, or molybdenum are essential nutrients for plants. These elements are involved in almost every biological process, including photosynthesis, tolerance to biotic and abiotic stress, or symbiotic nitrogen fixation. However, plants often grow in soils with limiting metallic oligonutrient bioavailability. Consequently, to ensure the proper metal levels, plants have developed a complex metal uptake and distribution system, that not only involves the plant itself, but also its associated microorganisms. These microorganisms can simply increase metal solubility in soils and making them more accessible to the host plant, as well as induce the plant metal deficiency response, or directly deliver transition elements to cortical cells. Other, instead of providing metals, can act as metal sinks, such as endosymbiotic rhizobia in legume nodules that requires relatively large amounts to carry out nitrogen fixation. In this review, we propose to do an overview of metal transport mechanisms in the plant–microbe system, emphasizing the role of arbuscular mycorrhizal fungi and endosymbiotic rhizobia. PMID:27524990

Contingency in the Direction and Mechanics of Soil Organic Matter Responses to Increased Rainfall

DOE Office of Scientific and Technical Information (OSTI.GOV)

Berhe, Asmeret A.; Suttle, K. Blake; Burton, Sarah D.

2012-09-03

Shifts in regional precipitation patterns will be a major component of global climate change. Rainfall will show greater and more variable changes in response to rising earth surface temperatures than most other climatic variables, and will be a major driver of ecosystem change. We studied the consequences of predicted changes in California’s rainy season for storage and stabilization mechanisms of soil organic matter (SOM). In a controlled and replicated experiment, we amended rainfall over large plots of natural grassland in accordance with alternative scenarios of future climate change. Results show that increases in annual rainfall have important consequences for soilmore » C storage, but that the strength and even direction of these effects depend entirely on seasonal timing. Rainfall increases during the winter rainy season led to pronounced C loss from soil while rainfall increases after the typical rainy season increased soil C stocks. Analysis of mineral-OM associations reveals a powerful mechanism underlying this difference: increased winter rainfall vastly diminished the role of Fe and Al oxides in SOM stabilization. Dithionite extractable crystalline Fe oxides explained more than 35 percent of the variability in C storage in ambient control and spring-addition treatments, compared to less than 0.01 percent in the winter-addition treatment. Likewise, poorly crystalline Fe and Al oxides explained more than 25 and 40 percent of the variability in C storage, respectively, in the control and spring-addition treatments compared to less than 5 percent in the -winter-addition treatment. Increases in annual precipitation identical in amount but at three-month offsets produced opposite effects on soil C storage. These results highlight the complexity inherent in biospheric feedbacks to the climate system, and the way that careful experimentation can penetrate that complexity to improve predictions of ecosystem and climatic change.« less

Depression and Unmet Needs for Assistance With Daily Activities Among Community-Dwelling Older Adults.

PubMed

Xiang, Xiaoling; An, Ruopeng; Heinemann, Allen

2018-05-08

This study aims to investigate the impact of depressive symptoms on adverse consequences of unmet needs for assistance with daily activities among community-dwelling older adults. Data came from round 1 to 5 of the National Health and Aging Trends Study. Study sample consisted of 3,400 Medicare beneficiaries needing assistance with activities of daily living (ADL), instrumental activities of daily living (IADL), or mobility for any two consecutive years between 2011 and 2015. Study outcome was the number of self-reported adverse consequences of unmet needs for assistance with daily activities (e.g., went without eating, wet or soiled clothes). Mixed-effects negative binomial regression was used to estimate the association of lagged depressive symptoms and covariates in period t-1 and the number of adverse consequences of unmet needs in period t. The prevalence rates of adverse consequences of unmet needs were twice as high among older adults with elevated depressive symptoms as those without depression. After adjusting for covariates, prior wave depressive symptoms were associated with 1.24 times the rate of adverse consequences of unmet needs for assistance with ADL (Incidence Rate Ratio [IRR] = 1.24, 95% confidence interval [CI] = 1.09-1.41, p < .01) and IADL (IRR = 1.24, 95% CI = 1.06-1.44, p < .01), and 1.14 times the rate of adverse consequences of unmet needs for assistance with mobility (IRR = 1.14, 95% CI = 1.03-1.27, p < .05). Caring for older adults with mental health and long-term care needs calls for an integrated social and health services system.

Resource homogenization in degraded arid landscapes induced by fire - erosion interactions

NASA Astrophysics Data System (ADS)

Ravi, S.; D'Odorico, P.; Wang, L.; Collins, S. L.; White, C. S.; Okin, G. S.

2007-12-01

Hydrological and aeolian processes are major drivers in the dynamics of arid landscapes in that they redistribute soil resources with important implications on the composition and spatial patterns of dryland vegetation. These processes are thought to play a major role in the conversion of disturbed desert grasslands into shrublands, with possible impacts on regional climate and desertification. At its early stages the grassland-to-shrubland transition can be still reversible and fires have been shown to contribute to the reversibility of the system. Even though fires are know to interact both with wind and water erosion, an understanding of these interactions and of their effect on aridland degradation is still missing. Here we use field manipulation experiments in a grass-shrub transition zone in the Chihuahuan desert to show how the interaction of fires with erosion processes may affect the distribution of soil resources with consequent effects on the pace of land degradation processes. Using microtopography measurements and isotopic analyses, we provide experimental evidence for the occurrence of post-fire enhancement of soil erosion, and relate this effect to the weakening of interparticle bonding forces associated with the emergence of fire-induced soil hydrophobicity. We also show how this effect favors the reversibility of the early stages of shrub-to-grass transition through the redistribution of soil resources from the fertile shrub-dominated areas (or "fertility islands") to the bare soil interspaces.

Predicting the responsiveness of soil biodiversity to deforestation: a cross-biome study.

PubMed

Crowther, Thomas W; Maynard, Daniel S; Leff, Jonathan W; Oldfield, Emily E; McCulley, Rebecca L; Fierer, Noah; Bradford, Mark A

2014-09-01

The consequences of deforestation for aboveground biodiversity have been a scientific and political concern for decades. In contrast, despite being a dominant component of biodiversity that is essential to the functioning of ecosystems, the responses of belowground biodiversity to forest removal have received less attention. Single-site studies suggest that soil microbes can be highly responsive to forest removal, but responses are highly variable, with negligible effects in some regions. Using high throughput sequencing, we characterize the effects of deforestation on microbial communities across multiple biomes and explore what determines the vulnerability of microbial communities to this vegetative change. We reveal consistent directional trends in the microbial community response, yet the magnitude of this vegetation effect varied between sites, and was explained strongly by soil texture. In sandy sites, the difference in vegetation type caused shifts in a suite of edaphic characteristics, driving substantial differences in microbial community composition. In contrast, fine-textured soil buffered microbes against these effects and there were minimal differences between communities in forest and grassland soil. These microbial community changes were associated with distinct changes in the microbial catabolic profile, placing community changes in an ecosystem functioning context. The universal nature of these patterns allows us to predict where deforestation will have the strongest effects on soil biodiversity, and how these effects could be mitigated. © 2014 John Wiley & Sons Ltd.

Ecohydrological modeling in agroecosystems: Examples and challenges

DOE PAGES

Porporato, A.; Feng, X.; Manzoni, S.; ...

2015-06-01

We report that human societies are increasingly altering the water and biogeochemical cycles to both improve ecosystem productivity and reduce risks associated with the unpredictable variability of climatic drivers. These alterations, however, often cause large negative environmental consequences, raising the question as to how societies can ensure a sustainable use of natural resources for the future. Here we discuss how ecohydrological modeling may address these broad questions with special attention to agroecosystems. The challenges related to modeling the two-way interaction between society and environment are illustrated by means of a dynamical model in which soil and water quality supports themore » growth of human society but is also degraded by excessive pressure, leading to critical transitions and sustained societal growth-collapse cycles. We then focus on the coupled dynamics of soil water and solutes (nutrients or contaminants), emphasizing the modeling challenges, presented by the strong nonlinearities in the soil and plant system and the unpredictable hydroclimatic forcing, that need to be overcome to quantitatively analyze problems of soil water sustainability in both natural and agricultural ecosystems. Finally, we discuss applications of this framework to problems of irrigation, soil salinization, and fertilization and emphasize how optimal solutions for large-scale, long-term planning of soil and water resources in agroecosystems under uncertainty could be provided by methods from stochastic control, informed by physically and mathematically sound descriptions of ecohydrological and biogeochemical interactions.« less

Hillslope erosion rates in the oak savannas of the southwestern borderlands region

Treesearch

Aaron T. Kauffman; Cody L. Stropki; Peter F. Ffolliott; Gerald J. Gottfried; Daniel G. Neary

2007-01-01

Hillslope soil erosion on watershed landscapes can lower the productivity of upland sites and adversely impact water quality and downstream (off-site) areas. It is not surprising, therefore, that excessive soil erosion and the consequent sedimentation can represent significant costs to the land and people that are affected. The first known estimates of hillslope soil...

Results from Assimilating AMSR-E Soil Moisture Estimates into a Land Surface Model Using an Ensemble Kalman Filter in the Land Information System

NASA Technical Reports Server (NTRS)

Blankenship, Clay B.; Crosson, William L.; Case, Jonathan L.; Hale, Robert

2010-01-01

Improve simulations of soil moisture/temperature, and consequently boundary layer states and processes, by assimilating AMSR-E soil moisture estimates into a coupled land surface-mesoscale model Provide a new land surface model as an option in the Land Information System (LIS)

Spatial pattern formation of microbes at the soil microscale affect soil C and N turnover in an individual-based microbial community model

NASA Astrophysics Data System (ADS)

Kaiser, Christina; Evans, Sarah; Dieckmann, Ulf; Widder, Stefanie

2016-04-01

At the μm-scale, soil is a highly structured and complex environment, both in physical as well as in biological terms, characterized by non-linear interactions between microbes, substrates and minerals. As known from mathematics and theoretical ecology, spatial structure significantly affects the system's behaviour by enabling synergistic dynamics, facilitating diversity, and leading to emergent phenomena such as self-organisation and self-regulation. Such phenomena, however, are rarely considered when investigating mechanisms of microbial soil organic matter turnover. Soil organic matter is the largest terrestrial reservoir for organic carbon (C) and nitrogen (N) and plays a pivotal role in global biogeochemical cycles. Still, the underlying mechanisms of microbial soil organic matter buildup and turnover remain elusive. We explored mechanisms of microbial soil organic matter turnover using an individual-based, stoichiometrically and spatially explicit computer model, which simulates the microbial de-composer system at the soil microscale (i.e. on a grid of 100 x 100 soil microsites). Soil organic matter dynamics in our model emerge as the result of interactions among individual microbes with certain functional traits (f.e. enzyme production rates, growth rates, cell stoichiometry) at the microscale. By degrading complex substrates, and releasing labile substances microbes in our model continusly shape their environment, which in turn feeds back to spatiotemporal dynamics of the microbial community. In order to test the effect of microbial functional traits and organic matter input rate on soil organic matter turnover and C and N storage, we ran the model into steady state using continuous inputs of fresh organic material. Surprisingly, certain parameter settings that induce resource limitation of microbes lead to regular spatial pattern formation (f.e. moving spiral waves) of microbes and substrate at the μm-scale at steady-state. The occurrence of these pattern can be explained by the Turing mechanism. These pattern formation had strong consequences for process rates, as well as for C and N storage in the soil at the steady state: Scenarios that exhibited pattern formation were generally associated with higher C storage at steady state compared to those without pattern formation (i.e. at non-limiting conditions for microbes). Moreover, pattern formation lead to a spatial decoupling of C and N turnover processes, and to a spatial decoupling of microbial N mineralization and N immobilization. Taken together, our theoretical analysis shows that self-organisation may be a feature of the soil decomposer system, with consequences for process rates of microbial C and N turnover. Pattern formation through spatial self-organization, which has been observed on larger spatial scales in other resource-limited communities (e.g., vegetation patterns in arid or wetland eco-systems), may also occur at the soil microscale, leaving its mark on the soil's storage capacity for C and N.

Global assessment of soil organic carbon stocks and spatial distribution of histosols: the Machine Learning approach

NASA Astrophysics Data System (ADS)

Hengl, Tomislav

2016-04-01

Preliminary results of predicting distribution of soil organic soils (Histosols) and soil organic carbon stock (in tonnes per ha) using global compilations of soil profiles (about 150,000 points) and covariates at 250 m spatial resolution (about 150 covariates; mainly MODIS seasonal land products, SRTM DEM derivatives, climatic images, lithological and land cover and landform maps) are presented. We focus on using a data-driven approach i.e. Machine Learning techniques that often require no knowledge about the distribution of the target variable or knowledge about the possible relationships. Other advantages of using machine learning are (DOI: 10.1371/journal.pone.0125814): All rules required to produce outputs are formalized. The whole procedure is documented (the statistical model and associated computer script), enabling reproducible research. Predicted surfaces can make use of various information sources and can be optimized relative to all available quantitative point and covariate data. There is more flexibility in terms of the spatial extent, resolution and support of requested maps. Automated mapping is also more cost-effective: once the system is operational, maintenance and production of updates are an order of magnitude faster and cheaper. Consequently, prediction maps can be updated and improved at shorter and shorter time intervals. Some disadvantages of automated soil mapping based on Machine Learning are: Models are data-driven and any serious blunders or artifacts in the input data can propagate to order-of-magnitude larger errors than in the case of expert-based systems. Fitting machine learning models is at the order of magnitude computationally more demanding. Computing effort can be even tens of thousands higher than if e.g. linear geostatistics is used. Many machine learning models are fairly complex often abstract and any interpretation of such models is not trivial and require special multidimensional / multivariable plotting and data mining tools. Results of model fitting using the R packages nnet, randomForest and the h2o software (machine learning functions) show that significant models can be fitted for soil classes, bulk density (R-square 0.76), soil organic carbon (R-square 0.62) and coarse fragments (R-square 0.59). Consequently, we were able to estimate soil organic carbon stock for majority of the land mask (excluding permanent ice) and detect patches of landscape containing mainly organic soils (peat and similar). Our results confirm that hotspots of soil organic carbon in Tropics are peatlands in Indonesia, north of Peru, west Amazon and Congo river basin. Majority of world soil organic carbon stock is likely in the Northern latitudes (tundra and taiga of the north). Distribution of histosols seems to be mainly controlled by climatic conditions (especially temperature regime and water vapor) and hydrologic position in the landscape. Predicted distributions of organic soils (probability of occurrence) and total soil organic carbon stock at resolutions of 1 km and 250 m are available via the SoilGrids.org project homepage.

Chemical speciation and bioaccessibility of lead in surface soil and house dust, Lavrion urban area, Attiki, Hellas.

PubMed

Demetriades, Alecos; Li, Xiangdong; Ramsey, Michael H; Thornton, Iain

2010-12-01

In the Lavrion urban area study, Hellas, a five-step sequential extraction method was applied on samples of 'soil' (n = 224), affected by long-term mining and metallurgical activities, and house dust (n = 127), for the purpose of studying the potential bioaccessibility of lead and other metals to humans. In this paper, the Pb concentrations in soil and house dust samples are discussed, together with those in rocks and children's blood. Lead is mainly associated with the carbonate, Fe-Mn oxides and residual fractions in soil and house dust. Considering the very low pH of gastric fluids (1-3), a high amount of metals, present in soil (810-152,000 mg/kg Pb) and house dust (418-18,600 mg/kg Pb), could be potentially bioaccessible. Consequently, children in the neighbourhoods with a large amount of metallurgical processing wastes have high blood-Pb concentrations (5.98-60.49 μg/100 ml; median 17.83 μg/100 ml; n = 235). It is concluded that the Lavrion urban and sub-urban environment is extremely hazardous to human health, and the Hellenic State authorities should urgently tackle this health-related hazard in order to improve the living conditions of local residents.

Temporal changes in soil water repellency linked to the soil respiration and CH4 and CO2 fluxes

NASA Astrophysics Data System (ADS)

Qassem, Khalid; Urbanek, Emilia; van Keulen, Geertje

2014-05-01

Soil water repellency (SWR) is known to be a spatially and temporally variable phenomenon. The seasonal changes in soil moisture lead to development of soil water repellency, which in consequence may affect the microbial activity and in consequence alter the CO2 and CH4 fluxes from soils. Soil microbial activity is strongly linked to the temperature and moisture status of the soil. In terms of CO2 flux intermediate moisture contents are most favourable for the optimal microbial activity and highest CO2 fluxes. Methanogenesis occurs primarily in anaerobic water-logged habitats while methanotrophy is a strictly aerobic process. In the study we hypothesise that the changes in CO2 and CH4 fluxes are closely linked to critical moisture thresholds for soil water repellency. This research project aims to adopt a multi-disciplinary approach to comprehensively determine the effect of SWR on CO2 and CH4 fluxes. Research is conducted in situ at four sites exhibiting SWR in the southern UK. Flux measurements are carried out concomitant with meteorological and SWR observations Field observations are supported by laboratory measurements carried out on intact soil samples collected at the above identified field sites. The laboratory analyses are conducted under constant temperatures with controlled changes of soil moisture content. Methanogenic and Methanotrophic microbial populations are being analysed at different SWR and moisture contents using the latest metagenomic and metatranscriptomic approaches. Currently available data show that greenhouse gas flux are closely linked with soil moisture thresholds for SWR development.

Arbuscular mycorrhizal fungi make a complex contribution to soil aggregation

NASA Astrophysics Data System (ADS)

McGee, Peter; Daynes, Cathal; Damien, Field

2013-04-01

Soil aggregates contain solid and fluid components. Aggregates develop as a consequence of the organic materials, plants and hyphae of arbuscular mycorrhizal (AM) fungi acting on the solid phase. Various correlative studies indicate hyphae of AM fungi enmesh soil particles, but their impact on the pore space is poorly understood. Hyphae may penetrate between particles, remove water from interstitial spaces, and otherwise re-arrange the solid phase. Thus we might predict that AM fungi also change the pore architecture of aggregates. Direct observations of pore architecture of soil, such as by computer-aided tomography (CT), is difficult. The refractive natures of solid and biological material are similar. The plant-available water in various treatments allows us to infer changes in pore architecture. Our experimental studies indicate AM fungi have a complex role in the formation and development of aggregates. Soils formed from compost and coarse subsoil materials were planted with mycorrhizal or non-mycorrhizal seedlings and the resultant soils compared after 6 or 14 months in separate experiments. As well as enmeshing particles, AM fungi were associated with the development of a complex pore space and greater pore volume. Even though AM fungi add organic matter to soil, the modification of pore space is not correlated with organic carbon. In a separate study, we visualised hyphae of AM fungi in a coarse material using CT. In this study, hyphae appeared to grow close to the surfaces of particles with limited ramification across the pore spaces. Hyphae of AM fungi appear to utilise soil moisture for their growth and development of mycelium. The strong correlation between moisture and hyphae has profound implications for soil aggregation, plant utilisation of soil water, and the distribution of water as water availability declines.

Soil pH mediates the balance between stochastic and deterministic assembly of bacteria

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tripathi, Binu M.; Stegen, James C.; Kim, Mincheol

Little is known about the factors affecting the relative influence of stochastic and deterministic processes that governs the assembly of microbial communities in successional soils. Here, we conducted a meta-analysis of bacterial communities using six different successional soils data sets, scattered across different regions, with different pH conditions in early and late successional soils. We found that soil pH was the best predictor of bacterial community assembly and the relative importance of stochastic and deterministic processes along successional soils. Extreme acidic or alkaline pH conditions lead to assembly of phylogenetically more clustered bacterial communities through deterministic processes, whereas pH conditionsmore » close to neutral lead to phylogenetically less clustered bacterial communities with more stochasticity. We suggest that the influence of pH, rather than successional age, is the main driving force in producing trends in phylogenetic assembly of bacteria, and that pH also influences the relative balance of stochastic and deterministic processes along successional soils. Given that pH had a much stronger association with community assembly than did successional age, we evaluated whether the inferred influence of pH was maintained when studying globally-distributed samples collected without regard for successional age. This dataset confirmed the strong influence of pH, suggesting that the influence of soil pH on community assembly processes occurs globally. Extreme pH conditions likely exert more stringent limits on survival and fitness, imposing strong selective pressures through ecological and evolutionary time. Taken together, these findings suggest that the degree to which stochastic vs. deterministic processes shape soil bacterial community assembly is a consequence of soil pH rather than successional age.« less

The consequences of land-cover changes on soil erosion distribution in Slovakia

NASA Astrophysics Data System (ADS)

Cebecauer, Tomáš; Hofierka, Jaroslav

2008-06-01

Soil erosion is a complex process determined by mutual interaction of numerous factors. The aim of erosion research at regional scales is a general evaluation of the landscape susceptibility to soil erosion by water, taking into account the main factors influencing this process. One of the key factors influencing the susceptibility of a region to soil erosion is land cover. Natural as well as human-induced changes of landscape may result in both the diminishment and acceleration of soil erosion. Recent studies of land-cover changes indicate that during the last decade more than 4.11% of Slovak territory has changed. The objective of this study is to assess the influence of land-cover and crop rotation changes over the 1990-2000 period on the intensity and spatial pattern of soil erosion in Slovakia. The assessment is based on principles defined in the Universal Soil Loss Equation (USLE) modified for application at regional scale and the use of the CORINE land cover (CLC) databases for 1990 and 2000. The C factor for arable land has been refined using statistical data on the mean crop rotation and the acreage of particular agricultural crops in the districts of Slovakia. The L factor has been calculated using sample areas with parcels identified by LANDSAT TM data. The results indicate that the land-cover and crop rotation changes had a significant influence on soil erosion pattern predominately in the hilly and mountainous parts of Slovakia. The pattern of soil erosion changes exhibits high spatial variation with overall slightly decreased soil erosion risks. These changes are associated with ongoing land ownership changes, changing structure of crops, deforestation and afforestation.

Variation in Soil Respiration across Soil and Vegetation Types in an Alpine Valley

PubMed Central

Rubin, Aurélie

2016-01-01

Background and Aims Soils of mountain regions and their associated plant communities are highly diverse over short spatial scales due to the heterogeneity of geological substrates and highly dynamic geomorphic processes. The consequences of this heterogeneity for biogeochemical transfers, however, remain poorly documented. The objective of this study was to quantify the variability of soil-surface carbon dioxide efflux, known as soil respiration (Rs), across soil and vegetation types in an Alpine valley. To this aim, we measured Rs rates during the peak and late growing season (July-October) in 48 plots located in pastoral areas of a small valley of the Swiss Alps. Findings Four herbaceous vegetation types were identified, three corresponding to different stages of primary succession (Petasition paradoxi in pioneer conditions, Seslerion in more advanced stages and Poion alpinae replacing the climactic forests), as well as one (Rumicion alpinae) corresponding to eutrophic grasslands in intensively grazed areas. Soils were developed on calcareous alluvial and colluvial fan deposits and were classified into six types including three Fluvisols grades and three Cambisols grades. Plant and soil types had a high level of co-occurrence. The strongest predictor of Rs was soil temperature, yet we detected additional explanatory power of sampling month, showing that temporal variation was not entirely reducible to variations in temperature. Vegetation and soil types were also major determinants of Rs. During the warmest month (August), Rs rates varied by over a factor three between soil and vegetation types, ranging from 2.5 μmol m-2 s-1 in pioneer environments (Petasition on Very Young Fluvisols) to 8.5 μmol m-2 s-1 in differentiated soils supporting nitrophilous species (Rumicion on Calcaric Cambisols). Conclusions Overall, this study provides quantitative estimates of spatial and temporal variability in Rs in the mountain environment, and demonstrates that estimations of soil carbon efflux at the watershed scale in complex geomorphic terrain have to account for soil and vegetation heterogeneity. PMID:27685955

Stochastic Consequence Analysis for Waste Leaks

DOE Office of Scientific and Technical Information (OSTI.GOV)

HEY, B.E.

This analysis evaluates the radiological consequences of potential Hanford Tank Farm waste transfer leaks. These include ex-tank leaks into structures, underneath the soil, and exposed to the atmosphere. It also includes potential misroutes, tank overflow

Calibrating Nonlinear Soil Material Properties for Seismic Analysis Using Soil Material Properties Intended for Linear Analysis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Spears, Robert Edward; Coleman, Justin Leigh

2015-08-01

Seismic analysis of nuclear structures is routinely performed using guidance provided in “Seismic Analysis of Safety-Related Nuclear Structures and Commentary (ASCE 4, 1998).” This document, which is currently under revision, provides detailed guidance on linear seismic soil-structure-interaction (SSI) analysis of nuclear structures. To accommodate the linear analysis, soil material properties are typically developed as shear modulus and damping ratio versus cyclic shear strain amplitude. A new Appendix in ASCE 4-2014 (draft) is being added to provide guidance for nonlinear time domain SSI analysis. To accommodate the nonlinear analysis, a more appropriate form of the soil material properties includes shear stressmore » and energy absorbed per cycle versus shear strain. Ideally, nonlinear soil model material properties would be established with soil testing appropriate for the nonlinear constitutive model being used. However, much of the soil testing done for SSI analysis is performed for use with linear analysis techniques. Consequently, a method is described in this paper that uses soil test data intended for linear analysis to develop nonlinear soil material properties. To produce nonlinear material properties that are equivalent to the linear material properties, the linear and nonlinear model hysteresis loops are considered. For equivalent material properties, the shear stress at peak shear strain and energy absorbed per cycle should match when comparing the linear and nonlinear model hysteresis loops. Consequently, nonlinear material properties are selected based on these criteria.« less

Geochemical Analyses of Surface and Shallow Gas Flux and Composition Over a Proposed Carbon Sequestration Site in Eastern Kentucky

DOE Office of Scientific and Technical Information (OSTI.GOV)

Thomas Parris; Michael Solis; Kathryn Takacs

2009-12-31

Using soil gas chemistry to detect leakage from underground reservoirs (i.e. microseepage) requires that the natural range of soil gas flux and chemistry be fully characterized. To meet this need, soil gas flux (CO{sub 2}, CH{sub 4}) and the bulk (CO{sub 2}, CH{sub 4}) and isotopic chemistry ({delta}{sup 13}C-CO2) of shallow soil gases (<1 m, 3.3 ft) were measured at 25 locations distributed among two active oil and gas fields, an active strip mine, and a relatively undisturbed research forest in eastern Kentucky. The measurements apportion the biologic, atmospheric, and geologic influences on soil gas composition under varying degrees ofmore » human surface disturbance. The measurements also highlight potential challenges in using soil gas chemistry as a monitoring tool where the surface cover consists of reclaimed mine land or is underlain by shallow coals. For example, enrichment of ({delta}{sup 13}C-CO2) and high CH{sub 4} concentrations in soils have been historically used as indicators of microseepage, but in the reclaimed mine lands similar soil chemistry characteristics likely result from dissolution of carbonate cement in siliciclastic clasts having {delta}{sup 13}C values close to 0{per_thousand} and degassing of coal fragments. The gases accumulate in the reclaimed mine land soils because intense compaction reduces soil permeability, thereby impeding equilibration with the atmosphere. Consequently, the reclaimed mine lands provide a false microseepage anomaly. Further potential challenges arise from low permeability zones associated with compacted soils in reclaimed mine lands and shallow coals in undisturbed areas that might impede upward gas migration. To investigate the effect of these materials on gas migration and composition, four 10 m (33 ft) deep monitoring wells were drilled in reclaimed mine material and in undisturbed soils with and without coals. The wells, configured with sampling zones at discrete intervals, show the persistence of some of the aforementioned anomalies at depth. Moreover, high CO{sub 2} concentrations associated with coals in the vadose zone suggest a strong affinity for adsorbing CO{sub 2}. Overall, the low permeability of reclaimed mine lands and coals and CO2 adsorption by the latter is likely to reduce the ability of surface geochemistry tools to detect a microseepage signal.« less

The ecohydrology of water limited landscapes

NASA Astrophysics Data System (ADS)

Huxman, T. E.

2011-12-01

Developing a mechanistic understanding of the coupling of ecological and hydrological systems is crucial for understanding the land-surface response of large areas of the globe to changes in climate. The distribution of biodiversity, the quantity and quality of streamflow, the biogeochemistry that constrains vegetation cover and production, and the stability of soil systems in watersheds are all functions of water-life coupling. Many key ecosystem services are governed by the dynamics of near-surface hydrology and biological feedbacks on the landscape occur through plant influence over available soil moisture. Thus, ecohydrology has tremendous potential to contribute to a predictive framework for understanding earth system dynamics. Despite the importance of such couplings and water as a major limiting resource in ecosystems throughout the globe, ecology still struggles with a mechanistic understanding of how changes in rainfall affect the biology of plants and microbes, or how changes in plant communities affect hydrological dynamics in watersheds. Part of the problem comes from our lack of understanding of how plants effectively partition available water among individuals in communities and how that modifies the physical environment, affecting additional resource availability and the passage of water along other hydrological pathways. The partitioning of evapotranspiration between transpiration by plants and evaporation from the soil surface is key to interrelated ecological, hydrological, and atmospheric processes and likely varies with vegetation structure and atmospheric dynamics. In addition, the vertical stratification of autotrophic and heterotrophic components in the soil profile, and the speed at which each respond to increased water, exert strong control over the carbon cycle. The magnitude of biosphere-atmosphere carbon exchange depends on the time-depth-distribution of soil moisture, a fundamental consequence of local precipitation pulse characteristics, soil texture and plant functional type. The transport of metabolic products within plants and their differential activation result in non-intuitive patterns of exchange associated with the major drivers creating problems with the scaling of physiological processes of individual plants to ecosystems. Such dynamics, along with hysteretic behavior creates challenges for measurement, evaluation, modeling and predicting ecosystem behavior. New frameworks and conceptual approaches to modeling ecosystem metabolism and the role of water are helping to describe the consequences of precipitation variability and change.

Radioisotope tracer approach for understanding the impacts of global change-induced pedoturbation on soil C dynamics

NASA Astrophysics Data System (ADS)

Gonzalez-Meler, M. A.; Sturchio, N. C.; Sanchez-de Leon, Y.; Blanc-Betes, E.; Taneva, L.; Poghosyan, A.; Norby, R. J.; Filley, T. R.; Guilderson, T. P.; Welker, J. M.

2010-12-01

Biogeochemical carbon-cycle feedbacks to climate are apparent but uncertain, primarily because of gaps in mechanistic understanding on the ecosystem processes that drive carbon cycling and storage in terrestrial ecosystems, particularly in soils. Recent findings are increasingly recognizing the interaction between soil biota and the soil physical environment. Soil carbon turnover is partly determined by burial of organic matter and its physical and chemical protection. These factors are potentially affected by changes in climate (freezing-thawing or wet-drying cycles) or ecosystem structure including biological invasions. A major impediment to understanding dynamics of soil C in terrestrial systems is our inability to measure soil physical processes such as soil mixing rates or turnover of soil structures, including aggregates. Here we present a multiple radioisotope tracer approach (naturally occurring and man-made) to measure soil mixing rates in response to global change. We will present evidence of soil mixing rate changes in a temperate forest exposed to increased levels of atmospheric CO2 and in a tundra ecosystem exposed to increased thermal insulation. In both cases, radioisotope tracers proved to be an effective way to measure effects of global change on pedoturbation. Results also provided insights into the specific mechanisms involved in the responses. Elevated CO2 resulted in deeper soil mixing cells (increased by about 5cm on average) when compared to control soils as a consequence of changes in biota (increased root growth, higher earthworm density). In the tundra, soil warming induced higher rates of cryoturbation, resulting in what appears to be a net uplift of organic matter to the surface thereby exposing deeper C to decomposers. In both cases, global change factors affected the vertical distribution of C and changed the amount of bulk soil actively involved in soil processes. As a consequence, comparisons of C budgets to a given soil depth in response to global change factors may be misleading if they do not account for the depth change in the soil mixing cells.

Sandy Soil Microaggregates: Rethinking Our Understanding of Hydraulic Function

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paradiś, Ashley; Brueck, Christopher; Meisenheimer, Douglas

2017-01-01

This study investigated the peculiar structure of microaggregates in coarse sandy soils that exhibit only external porosity and investigated their control on soil hydrology. The microstructure underpins a hydrologic existence that differs from finer textured soils where aggregates have internal porosity. Understanding the impact of these microaggregates on soil hydrology will permit improved agricultural irrigation management and estimates associated with ecosystem capacity and resiliency. Microstructure was investigated using a digital microscope, and aspects of the structure were quantified by sedimentation and computed microtomography. Sandy soil microaggregates were observed to be comprised of a solid sand-grain core that is coated withmore » fines, presumably cemented by organic media. This microstructure leads to three distinct water pools during drainage: capillary water, followed by thick films (1–20 μm) enveloping the outer surfaces of the crusted microaggregates, followed by adsorbed thin films (<1 μm). The characteristics of the thick films were investigated using an analytical model. These films may provide as much as 10 to 40% saturation in the range of plant-available water. Using lubrication theory, it was predicted that thick film drainage follows a power law function with an exponent of 2. Thick films may also have a role in the geochemical evolution of soils and in ecosystem function because they provide contiguous water and gas phases at relatively high moisture contents. And, because the rough outer crust of these microaggregates can provide good niches for microbial activity, biofilm physics will dominate thick film processes, and consequently hydrologic, biologic, and geochemical functions for coarse sandy soils.« less

Impacts of fire on sources of soil CO2 efflux in a dry Amazon rain forest.

PubMed

Metcalfe, Daniel B; Rocha, Wanderley; Balch, Jennifer K; Brando, Paulo M; Doughty, Christopher E; Malhi, Yadvinder

2018-05-10

Fire at the dry southern margin of the Amazon rainforest could have major consequences for regional soil carbon (C) storage and ecosystem carbon dioxide (CO 2 ) emissions, but relatively little information exists about impacts of fire on soil C cycling within this sensitive ecotone. We measured CO 2 effluxes from different soil components (ground surface litter, roots, mycorrhizae, soil organic matter) at a large-scale burn experiment designed to simulate a severe but realistic potential future scenario for the region (Fire plot) in Mato Grosso, Brazil, over one year, and compared these measurements to replicated data from a nearby, unmodified Control plot. After four burns over five years, soil CO 2 efflux (R s ) was ~ 5.5 t C ha -1 yr -1 lower on the Fire plot compared to the Control. Most of the Fire plot R s reduction was specifically due to lower ground surface litter and root respiration. Mycorrhizal respiration on both plots was around ~ 20% of R s . Soil surface temperature appeared to be more important than moisture as a driver of seasonal patterns in R s at the site. Regular fire events decreased the seasonality of R s at the study site, due to apparent differences in environmental sensitivities among biotic and abiotic soil components. These findings may contribute towards improved predictions of the amount and temporal pattern of C emissions across the large areas of tropical forest facing increasing fire disturbances associated with climate change and human activities. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Potential negative consequences of adding phosphorus-based fertilizers to immobilize lead in soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kilgour, Douglas W.; Moseley, Rebecca A.; Savage, Kaye S

2008-09-01

A study of the potential negative consequences of adding phosphate (P)-based fertilizers as amendments to immobilize lead (Pb) in contaminated soils was conducted. Lead-contaminated firing range soils also contained elevated concentrations of antimony (Sb), a common Pb hardening agent, and some arsenic (As) of unknown (possibly background) origin. After amending the soils with triple superphosphate, a relatively soluble P source, column leaching experiments revealed elevated concentrations of Sb, As, and Pb in the leachate, reflecting an initial spike in soluble Pb and a particularly dramatic increase in Sb and As mobility. Minimal As, Sb, and Pb leaching was observed duringmore » column tests performed on non-amended control soils. In vitro extractions tests were performed to assess changes in Pb, As, and Sb bioaccessibility on P amendment. Lead bioaccessibility was systematically lowered with increasing P dosage, but there was much less of an effect on As and Sb bioaccessibility than on mobility. Our results indicate that although P amendments may aid in lowering the bioaccessibility of soil-bound Pb, it may also produce an initial increase in Pb mobility and a significant release of Sb and As from the soil, dramatically increasing their mobility and to a lesser extent their bioavailability.« less

Biomass removal, soil compaction, and vegetation control effects on five-year growth of Douglas-fir in coastal Washington.

Treesearch

A. Ares; T. Terry; C. Harrington; W. Devine; D. Peter; J. Bailey

2007-01-01

Sustainable forest production requires an understanding of the effects of site disturbance on tree growth and the consequences of soil amelioration and vegetation control practices. We assessed the impacts of biomass removals at harvest, soil compaction and tillage, and vegetation control on early growth of Douglas-fir in coastal Washington. Harvest treatments included...

Quantification and mapping of surface residue cover and tillage practices for maize and soybean fields in south central Nebraska-USA using Landsat imagery

USDA-ARS?s Scientific Manuscript database

The area cultivated under conservation tillage practices such as no-till and minimal tillage has recently increased in south central Nebraska (NE). Consequently, changes in some of the impacts of cropping systems on soil such as enhancing soil and water quality, improving soil structures and infiltr...

Harvest residue and competing vegetation affect soil moisture, soil temperature, N availability, and Douglas-fir seedling growth.

Treesearch

Scott D. Roberts; Constance A. Harrington; Thomas A. Terry

2005-01-01

Decisions made during stand regeneration that affect subsequent levels of competing vegetation and residual biomass can have important short-term consequences for early stand growth, and may affect long-term site productivity. Competing vegetation clearly affects the availability of site resources such as soil moisture and nutrients. Harvest residues can also impact...

Microbial diversity affects self-organization of the soil–microbe system with consequences for function

PubMed Central

Crawford, John W.; Deacon, Lewis; Grinev, Dmitri; Harris, James A.; Ritz, Karl; Singh, Brajesh K.; Young, Iain

2012-01-01

Soils are complex ecosystems and the pore-scale physical structure regulates key processes that support terrestrial life. These include maintaining an appropriate mixture of air and water in soil, nutrient cycling and carbon sequestration. There is evidence that this structure is not random, although the organizing mechanism is not known. Using X-ray microtomography and controlled microcosms, we provide evidence that organization of pore-scale structure arises spontaneously out of the interaction between microbial activity, particle aggregation and resource flows in soil. A simple computational model shows that these interactions give rise to self-organization involving both physical particles and microbes that gives soil unique material properties. The consequence of self-organization for the functioning of soil is determined using lattice Boltzmann simulation of fluid flow through the observed structures, and predicts that the resultant micro-structural changes can significantly increase hydraulic conductivity. Manipulation of the diversity of the microbial community reveals a link between the measured change in micro-porosity and the ratio of fungal to bacterial biomass. We suggest that this behaviour may play an important role in the way that soil responds to management and climatic change, but that this capacity for self-organization has limits. PMID:22158839

Effects of inter-row management intensity on wild bee, plant and soil biota diversity in vineyards

NASA Astrophysics Data System (ADS)

Kratschmer, Sophie; Pachinger, Bärbel; Winter, Silvia; Zaller, Johann G.; Buchholz, Jacob; Querner, Pascal; Strauß, Peter; Bauer, Thomas; Stiper, Katrin

2016-04-01

Vineyards may provide a range of essential ecosystem services, which interact with a diverse community of above- and belowground organisms. Intensive soil management like frequent tilling has resulted in the degradation of habitat quality with consequences on biodiversity and ecosystem services. This study is part of the European BiodivERsA project "VineDivers - Biodiversity-based ecosystem services in vineyards". We study the effects of different soil management intensities on above- and below-ground biodiversity (plants, insect pollinators, and soil biota), their interactions and the consequences for ecosystem services. We investigated 16 vineyards in Austria assessing the diversity of (1) wild bees using a semi-quantitative transect method, (2) earthworms by hand sorting, (3) Collembola (springtails) via pitfall trapping and soil coring, (4) plants by relevés and (5) litter decomposition (tea bag method). Management intensity differed in tillage frequency from intermediate intensity resulting in temporary vegetation cover to no tillage in permanent vegetation cover systems. First results show opposed relationships between the biodiversity of selected species groups and management intensity. We will discuss possible explanations and evaluate ecological interactions between wild bee, plant and soil biota diversity.

Spectroscopic analyses of soil samples outside Nile Delta of Egypt

NASA Astrophysics Data System (ADS)

Fakhry, Ahmed; Osman, Osama; Ezzat, Hend; Ibrahim, Medhat

2016-11-01

Soil in Egypt, especially around Delta is exposed to various pollutants which are affecting adversely soil fertility and stability. Humic Acids (HA) as a main part of soil organic matter (SOM) represent the heart of the interaction process of inorganic pollutants with soil. Consequently, Fourier transform infrared spectroscopy (FTIR) and Nuclear magnetic resonances (NMR) were used to characterize soil, sediment and extracted HA. Resulting data confirmed that the HA was responsible for transporting inorganic pollutants from surface to subsurface reaching the ground water, which may represent a high risk on public health. The transport process is coming as carboxyl in surface soil changed into metal carboxylate then transferred into the carboxyl in bottom soil.

Bioaccumulation and associated dietary risks of Pb, Cd, and Zn in amaranth (Amaranthus cruentus) and jute mallow (Corchorus olitorius) grown on soil irrigated using polluted water from Asa River, Nigeria.

PubMed

Ogunkunle, Clement Oluseye; Ziyath, Abdul M; Adewumi, Faderera Esther; Fatoba, Paul Ojo

2015-05-01

Dietary uptake of heavy metals through the consumption of vegetables grown on polluted soil can have serious human health implications. Thus, the study presented in this paper investigated the bioaccumulation and associated dietary risks of Pb, Zn, and Cd present in vegetables widely consumed in Nigeria, namely amaranth and jute mallow, grown on soil irrigated with polluted water from Asa River. The study found that the soil was polluted with Zn, Pb, and Cd with Pb and Cd being contributed by polluted river, while Zn was from geogenic sources. The metal concentration in amaranth and jute mallow varied in the order of Zn > Pb > Cd and Zn > Pb ≈ Cd, respectively. Jute mallow acts as an excluder plant for Pb, Cd, and Zn. Consequently, the metal concentrations in jute mallow were below the toxic threshold levels. Furthermore, non-cancer human health risk of consuming jute mallow from the study site was not significant. In contrast, the concentrations of Pb and Cd in amaranth were found to be above the recommended safe levels and to be posing human health risks. Therefore, further investigation was undertaken to identify the pathways of heavy metals to amaranth. The study found that the primary uptake pathway of Pb and Cd by amaranth is foliar route, while root uptake is the predominant pathway of Zn in amaranth.

Solubility of aluminum and silica in Spodic horizons as affected by drying and freezing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Simonsson, M.; Berggren, D.; Gustafsson, J.P.

The release of toxic Al{sup 3+} is one of the most serious consequences of anthropogenic soil acidification. Therefore, the mechanisms controlling Al solubility have been a topic of intense research for more than a decade. For convenience, soil samples are often dried before storage and experimental use. However, the literature offers examples of drying that results in changes in pH, solubility of organic matter, and dissolution rates of Al. In this study, the authors examined the solubility of Al and Si in fresh soil and in soil that had been dried or deep-frozen. Five Spodosol B horizon soils were subjectedmore » to batch titrations, where portions of each soil were equilibrated with solutions with varying concentrations of acid or base added. Extractions with acid oxalate and Na pyrophosphate indicated the presence of imogolite-type materials (ITM) in three of the soils. In the other two soils most secondary solid-phase Al was associated with humic substances. Deep-freezing did not significantly change pH nor the concentration of Al or Si as compared with fresh soil. Drying, on the other hand, yielded pH increases of up to 0.3 units at a given addition of acid or base, whereas Al{sup 3+} changed only slightly, implying a higher Al solubility in all of the soils. Furthermore, dissolved silica increased by up to 200% after drying, except in a soil that almost completely lacked oxalate-extractable Si. The authors suggest that drying enhanced the dissolution of ITM by disrupting soil organic matter, thus exposing formerly coated mineral surfaces. In the soil where dissolved Si did not change with drying, it has been demonstrated that Al-humus complexes controlled Al solubility. They suggest that fissures in the organic material caused by drying may have exposed formerly occluded binding sites that had a higher Al saturation than had sites at the surface of humus particles.« less

Integrated approach to assess the environmental impact of mining activities: estimation of the spatial distribution of soil contamination (Panasqueira mining area, Central Portugal).

PubMed

Candeias, Carla; Ávila, Paula F; Ferreira da Silva, Eduardo; Teixeira, João Paulo

2015-03-01

Through the years, mining and beneficiation processes in Panasqueira Sn-W mine (Central Portugal) produced large amounts of As-rich mine wastes laid up in huge tailings and open-air impoundments (Barroca Grande and Rio tailings) that are the main source of pollution in the surrounding area once they are exposed to the weathering conditions leading to the formation of acid mine drainage (AMD) and consequently to the contamination of the surrounding environments, particularly soils. The active mine started the exploration during the nineteenth century. This study aims to look at the extension of the soil pollution due to mining activities and tailing erosion by combining data on the degree of soil contamination that allows a better understanding of the dynamics inherent to leaching, transport, and accumulation of some potential toxic elements in soil and their environmental relevance. Soil samples were collected in the surrounding soils of the mine, were digested in aqua regia, and were analyzed for 36 elements by inductively coupled plasma mass spectrometry (ICP-MS). Selected results are that (a) an association of elements like Ag, As, Bi, Cd, Cu, W, and Zn strongly correlated and controlled by the local sulfide mineralization geochemical signature was revealed; (b) the global area discloses significant concentrations of As, Bi, Cd, and W linked to the exchangeable and acid-soluble bearing phases; and (c) wind promotes the mechanical dispersion of the rejected materials, from the milled waste rocks and the mineral processing plant, with subsequent deposition on soils and waters. Arsenic- and sulfide-related heavy metals (such as Cu and Cd) are associated to the fine materials that are transported in suspension by surface waters or associated to the acidic waters, draining these sites and contaminating the local soils. Part of this fraction, especially for As, Cd, and Cu, is temporally retained in solid phases by precipitation of soluble secondary minerals (through the precipitation of hydrated metal sulfates) in warm, dry periods, but such minerals are easily dissolved during rainy periods. Climate is an important instability factor, and the hot and dry summers and cold, rainy, and windy winters in this region are physical phenomena that enhance the good receptivity of these soils to retain some of the metals present in the primary and also the secondary mineralogy. Considering the obtained results from both the sequential chemical extraction and the environmental risk assessment according to the risk assessment code, Ag, Cd, Cu, and Zn are classified with very high risk while As is classified with medium risk.

Environmental behavior of the enantiomers of the chiral fungicide metalaxyl in Mediterranean agricultural soils.

PubMed

Celis, R; Gámiz, B; Adelino, M A; Hermosín, M C; Cornejo, J

2013-02-01

Improving the existing knowledge on the enantioselectivity of processes affecting chiral pesticide enantiomers in the environment is necessary to maximize the efficacy and minimize the environmental impact caused by the use of pesticides with chiral properties. In this work, the enantioselectivity of the sorption, degradation, and leaching processes of the chiral fungicide metalaxyl in three slightly alkaline, agricultural soils from southern Spain was studied. Batch sorption experiments indicated that the sorption of racemic-metalaxyl on soils, their clay (<2 μm) fractions, and a number of model sorbents simulating naturally-occurring soil colloidal particles was non-enantioselective; the S-enantiomer was sorbed to the same extent as the R-enantiomer on all soil materials. Soil incubation experiments revealed that the R-enantiomer of metalaxyl was degraded faster than the S-enantiomer in all three soils, but the extent and enantioselectivity of metalaxyl degradation was soil-dependent, occurring more slowly and with less enantioselectivity in the fine-textured soil (soil 1) than in the coarse-textured soils (soils 2 and 3). For soils 2 and 3, S- and R-metalaxyl dissipation data were very well described by single first-order kinetics, whereas for soil 1 dissipation data were better fitted by two coupled first-order equations. It is suggested that sorption and entrapment of metalaxyl enantiomers in the abundant small-size pores of soil 1 (i.e., pore radius<100 nm) could have resulted in a fraction of the fungicide of reduced bioavailability, and consequently, protected from enantioselective degradation. Metalaxyl leaching through soil columns was also enantioselective; the concentration of S-metalaxyl in all leachates collected was greater than that of R-metalaxyl. Despite being non-enantioselective, sorption influenced the enantioselectivity of metalaxyl leaching, as it determined the residence time of the fungicide within the soil column, and consequently, the extent and enantioselectivity of its degradation during leaching. Copyright © 2012 Elsevier B.V. All rights reserved.

Antibiotic resistance genes and residual antimicrobials in cattle feedlot surface soil

USDA-ARS?s Scientific Manuscript database

Cattle feedlot soils receive manure containing both antibiotic residues and antibiotic resistant bacteria. The fates of these constituents are largely unknown with potentially serious consequences for increased antibiotic resistance in the environment. Determine if common antimicrobials (tetracycl...

Soil Response to Global Change: Soil Process Domains and Pedogenic Thresholds (Invited)

NASA Astrophysics Data System (ADS)

Chadwick, O.; Kramer, M. G.; Chorover, J.

2013-12-01

The capacity of soil to withstand perturbations, whether driven by climate, land use change, or spread of invasive species, depends on its chemical composition and physical state. The dynamic interplay between stable, well buffered soil process domains and thresholds in soil state and function is a strong determinant of soil response to forcing from global change. In terrestrial ecosystems, edaphic responses are often mediated by availability of water and its flux into and through soils. Water influences soil processes in several ways: it supports biological production, hence proton-donor, electron-donor and complexing-ligand production; it determines the advective removal of dissolution products, and it can promote anoxia that leads microorganisms to utilize alternative electron acceptors. As a consequence climate patterns strongly influence global distribution of soil, although within region variability is governed by other factors such as landscape age, parent material and human land use. By contrast, soil properties can vary greatly among climate regions, variation which is guided by the functioning of a suite of chemical processes that tend to maintain chemical status quo. This soil 'buffering' involves acid-base reactions as minerals weather and oxidation-reduction reactions that are driven by microbial respiration. At the planetary scale, soil pH provides a reasonable indicator of process domains and varies from about 3.5 to10, globally, although most soils lie between about 4.5 and 8.5. Those that are above 7.5 are strongly buffered by the carbonate system, those that are characterized by neutral pH (7.5-6) are buffered by release of non-hydrolyzing cations from primary minerals and colloid surfaces, and those that are <6 are buffered by hydrolytic aluminum on colloidal surfaces. Alkali and alkaline (with the exception of limestone parent material) soils are usually associated with arid and semiarid conditions, neutral pH soils with young soils in both dry and wet environments and acid soils with wet environments. Furthermore acid soils often have lost much of their easily weatherable primary minerals and their soluble (plant nutrient) ions, and thus much of their ability to buffer against acidity introduced by biological respiration and its products. Acid soils are closer to thermodynamic equilibrium with their near-surface environment and are less vulnerable to change compared with soils that contain a substantial supply of weatherable minerals (young soils) or carbonate minerals (dry soils). The impact of changing seasonal and annual rainfall and evapotranspiration patterns associated with climate change depends on how current pedogenic thresholds manifest across the landscape. We expect that humid soils subjected to drying should undergo less change than arid or semi-arid soils subjected to wetter seasonal conditions. Land-use changes can drive differential responses depending on changing chemistry and porosity. Collectively these factors provide the framework from which to predict and map soil sensivity to global change and climate change in particular.

Turning sunlight into stone: the oxalate-carbonate pathway in a tropical tree ecosystem

NASA Astrophysics Data System (ADS)

Cailleau, G.; Braissant, O.; Verrecchia, E. P.

2011-07-01

An African oxalogenic tree, the iroko tree (Milicia excelsa), has the property to enhance carbonate precipitation in tropical oxisols, where such accumulations are not expected due to the acidic conditions in these types of soils. This uncommon process is linked to the oxalate-carbonate pathway, which increases soil pH through oxalate oxidation. In order to investigate the oxalate-carbonate pathway in the iroko system, fluxes of matter have been identified, described, and evaluated from field to microscopic scales. In the first centimeters of the soil profile, decaying of the organic matter allows the release of whewellite crystals, mainly due to the action of termites and saprophytic fungi. In addition, a concomitant flux of carbonate formed in wood tissues contributes to the carbonate flux and is identified as a direct consequence of wood feeding by termites. Nevertheless, calcite biomineralization of the tree is not a consequence of in situ oxalate consumption, but rather related to the oxalate oxidation inside the upper part of the soil. The consequence of this oxidation is the presence of carbonate ions in the soil solution pumped through the roots, leading to preferential mineralization of the roots and the trunk base. An ideal scenario for the iroko biomineralization and soil carbonate accumulation starts with oxalatization: as the iroko tree grows, the organic matter flux to the soil constitutes the litter, and an oxalate pool is formed on the forest ground. Then, wood rotting agents (mainly termites, saprophytic fungi, and bacteria) release significant amounts of oxalate crystals from decaying plant tissues. In addition, some of these agents are themselves producers of oxalate (e.g. fungi). Both processes contribute to a soil pool of "available" oxalate crystals. Oxalate consumption by oxalotrophic bacteria can then start. Carbonate and calcium ions present in the soil solution represent the end products of the oxalate-carbonate pathway. The solution is pumped through the roots, leading to carbonate precipitation. The main pools of carbon are clearly identified as the organic matter (the tree and its organic products), the oxalate crystals, and the various carbonate features. A functional model based on field observations and diagenetic investigations with δ13C signatures of the various compartments involved in the local carbon cycle is proposed. It suggests that the iroko ecosystem can act as a long-term carbon sink, as long as the calcium source is related to non-carbonate rocks. Consequently, this carbon sink, driven by the oxalate carbonate pathway around an iroko tree, constitutes a true carbon trapping ecosystem as defined by ecological theory.

Turning sunlight into stone: the oxalate-carbonate pathway in a tropical tree ecosystem

NASA Astrophysics Data System (ADS)

Cailleau, G.; Braissant, O.; Verrecchia, E. P.

2011-02-01

An African oxalogenic tree, the iroko tree (Milicia excelsa), has the property to enhance carbonate precipitation in tropical oxisols, where such accumulations are not expected due to the theoretical acidic conditions of these soils. This uncommon process is linked to the oxalate-carbonate pathway, which increases soil pH through oxalate oxidation. In order to investigate the oxalate-carbonate pathway in the iroko system, fluxes of matter have been identified, described, and evaluated from field to microscopic scales. In the first centimeters of the soil profile, decaying of the organic matter allows the release of whewellite crystals, mainly due to the action of termites and saprophytic fungi. Regarding the carbonate flux, another direct consequence of wood feeding is a concomitant flux of carbonate formed in wood tissues, which is not consumed by termites. Nevertheless, calcite biomineralization of the tree is not a consequence of in situ oxalate consumption, but rather related to the oxalate oxidation inside the upper part of the soil. The consequence of this oxidation is the presence of carbonate ions in the soil solution pumped through the roots, leading to preferential mineralization of the roots and the trunk base. An ideal scenario for the iroko biomineralization and soil carbonate accumulation starts with oxalatization: as the iroko tree grows, the organic matter flux to the soil constitutes the litter. Therefore, an oxalate pool is formed on the forest ground. Then, wood rotting gents (mainly termites, fungi, and bacteria) release significant amounts of oxalate crystals from decaying plant tissues. In addition some of these gents are themselves producers of oxalate (fungi). Both processes contribute to a soil pool of "available" oxalate crystals. Oxalate consumption by oxalotrophic bacteria can start. Carbonate and calcium ions present in the soil solution represent the end products of the oxalate-carbonate pathway. The solution is pumped through the roots, leading to carbonate precipitation. The main pools of carbon are clearly identified as the organic matter (the tree and its organic products), the oxalate crystals, and the various carbonate features. A functional model based on field observations and diagenetic investigations with δ13C signatures of the various compartments involved in the local carbon cycle is proposed. It suggests that the iroko ecosystem can act as a long-term carbon sink, as long as the calcium source is related to non-carbonate rocks. Consequently, this carbon sink, driven by the oxalate carbonate pathway around an iroko tree, constitutes a true carbon trapping ecosystem as define by the ecological theory.

Soil aggregate stability and rainfall-induced sediment transport on field plots as affected by amendment with organic matter inputs

NASA Astrophysics Data System (ADS)

Shi, Pu; Arter, Christian; Liu, Xingyu; Keller, Martin; Schulin, Rainer

2017-04-01

Aggregate stability is an important factor in soil resistance against erosion, and, by influencing the extent of sediment transport associated with surface runoff, it is thus also one of the key factors which determine on- and off-site effects of water erosion. As it strongly depends on soil organic matter, many studies have explored how aggregate stability can be improved by organic matter inputs into the soil. However, the focus of these studies has been on the relationship between aggregate stability and soil organic matter dynamics. How the effects of organic matter inputs on aggregate stability translate into soil erodibility under rainfall impacts has received much less attention. In this study, we performed field plot experiments to examine how organic matter inputs affect aggregate breakdown and surface sediment transport under field conditions in artificial rainfall events. Three pairs of plots were prepared by adding a mixture of grass and wheat straw to one of plots in each pair but not to the other, while all plots were treated in the same way otherwise. The rainfall events were applied some weeks later so that the applied organic residues had sufficient time for decomposition and incorporation into the soil. Surface runoff rate and sediment concentration showed substantial differences between the treatments with and without organic matter inputs. The plots with organic inputs had coarser and more stable aggregates and a rougher surface than the control plots without organic inputs, resulting in a higher infiltration rate and lower transport capacity of the surface runoff. Consequently, sediments exported from the amended plots were less concentrated but more enriched in suspended particles (<20 µm) than from the un-amended plots, indicating a more size-selective sediment transport. In contrast to the amended plots, there was an increase in the coarse particle fraction (> 250 µm) in the runoff from the plots with no organic matter inputs towards the end of the rainfall events due to emerging bed-load transport. The results show that a single application of organic matter can already cause a large difference in aggregate breakdown, surface sealing, and lateral sediment-associated matter transfer under rainfall impact. Furthermore, we will present terrestrial laser scanning data showing the treatment effects on soil surface structure, as well as data on carbon, phosphorus and heavy metal export associated with the translocation of the sediments.

Molecular C dynamics downstream: the biochemical decomposition sequence and its impact on soil organic matter structure and function.

PubMed

Grandy, A Stuart; Neff, Jason C

2008-10-15

Advances in spectroscopic and other chemical methods have greatly enhanced our ability to characterize soil organic matter chemistry. As a result, the molecular characteristics of soil C are now known for a range of ecosystems, soil types, and management intensities. Placing this knowledge into a broader ecological and management context is difficult, however, and remains one of the fundamental challenges of soil organic matter research. Here we present a conceptual model of molecular soil C dynamics to stimulate inter-disciplinary research into the ecological implications of molecular C turnover and its management- and process-level controls. Our model describes three properties of soil C dynamics: 1) soil size fractions have unique molecular patterns that reflect varying degrees of biological and physical control over decomposition; 2) there is a common decomposition sequence independent of plant inputs or other ecosystem properties; and 3) molecular decomposition sequences, although consistent, are not uniform and can be altered by processes that accelerate or slow the microbial transformation of specific molecules. The consequences of this model include several key points. First, lignin presents a constraint to decomposition of plant litter and particulate C (>53 microm) but exerts little influence on more stable mineral-associated soil fractions <53 microm. Second, carbon stabilized onto mineral fractions has a distinct composition related more to microbially processed organic matter than to plant-related compounds. Third, disturbances, such as N fertilization and tillage, which alter decomposition rates, can have "downstream effects"; that is, a disturbance that directly alters the molecular dynamics of particulate C may have a series of indirect effects on C stabilization in silt and clay fractions.

Hydrocarbon Development from Shale: A Set of Important, Unsolved Problems

NASA Astrophysics Data System (ADS)

Ingraffea, A. R.; Burchell, A.; Howarth, R.; Wilson, A.; Doe, P.; Colborn, T.; Wood, M. C.

2013-12-01

Hydraulic fracturing has become synonymous with the new technologies and processes used to develop oil and methane from shale formations. We will address the following important set of problems associated with such development and the role scientists are playing in communicating these to the public. Human Health Consequences: The health consequences of the wide-range of fugitive hydrocarbon emissions associated with methane and oil are not adequately addressed. New evidence about exposure to, and the known and possible health effects of, these toxic hitch hikers will be presented. Methane Emissions: Methane is a more powerful greenhouse gas than carbon dioxide, though atmospheric residence is shorter. Methane is emitted through-out the development life-cycle, albeit there is uncertainty over the rate, and short-term effect on global warming. Leakage from Faulty Wells: Multiple industry studies show that about 5 percent of oil and gas wells immediately leak methane and other fluids into the atmosphere and water wells due to integrity issues and increasing rates of leakage over time. With millions of wells drilled worldwide, and millions more expected, this problem is neither negligible nor preventable with current technology. Federal Exemptions and Home Rule: 'Fracking' currently slips through federal environmental statutory law because of an industry-friendly exemption. However, trusts are established in US law and the Public Trust Doctrine provides a basis for courts to enjoin 'fracking' due to the potential impact on beneficiaries of the trust --present and future generations. The public trust designates government as a trustee of crucial resources and imposes a fiduciary obligation on agencies to prevent "substantial impairment" of- and protect access to- clean air, clean water and other natural resources vital for public welfare and survival. Already applied to the realm of ecology, the doctrine is reviewed as a legal and policy toot to protect communities threatened by 'fracking.' Additionally, 'oil and gas - rights' Legislation and State Supreme Court decisions in communities underlain by shale deposits has been to silence 'Home-Rule' rights. The post-extraction impact of such rulings on public health and property values is dramatic. Soil Quality: Fracking poses a serious threat to soil quality and underlines the crucial role that soils can play in mitigating climate change. In addition to critical ecosystem and agricultural benefits, healthy soils represent a significant natural carbon reservoir. Enhancing the Natural Terrestrial Sequestration (NTS) potential of soils is an important carbon management strategy. Our studies reveal undisturbed soils underlain by intermediate to mafic volcanic rocks and shale formations sampled can have 2 to 6 times greater total organic soil carbon (TOSC) than global averages. However, anthropogenic disturbed-lands now represent the 7th largest- land class (ISRIC, US-DOI) and may account for a significant reduction in NTS potential. EPA studies indicate 20 to 85% of frack-fluids are not recovered. This could continue to be a long-term source of soil and groundwater contamination - risking further decreased NTS potential.

The impact of Pu speciation on distribution coefficients in Mayak soil.

PubMed

Skipperud, L; Oughton, D; Salbu, B

2000-08-10

To assess the long-term consequences when radionuclides are released into the environment, information on the source term, transport and transformation processes, interaction with soils (KD) and biological uptake (CF) is needed. Among the artificial radionuclides released to the environment by nuclear activities, the transuranium elements are a major concern, due to very long half-lives and their accumulation in bone as well as high radiotoxicity. Plutonium has been produced in greater quantity than other transuranic elements, however, environmental assessments are complicated by the complex environmental behaviour. Physico-chemical forms of Pu will determine the interactions with soils and, thus, the degree to which soils can act as a sink or a potential diffuse source of contaminants. In the present work, dynamic tracer experiments have been performed where different Pu-species are added to a 'Mayak soil-rainwater system' to obtain information on KD values. After a defined contact time, the samples where then sequentially extracted and results are used in a dynamic box model to estimate interaction and fixation rates. The interaction of all Pu-species with soils seems to be rapid and follows a two-step reaction. Up to contact times of a few weeks, the KD for Pu(III,IV) (730 +/- 240 l/kg) is approximately one order of magnitude higher than for Pu(V,VI) (90 +/- 20 l/kg) and Pu(III,IV)-organic (40-60 l/kg). After 3 months contact time, the KD in only the two organic-bound Pu-species were significantly lower. This shows that the initial association with the soil is dependent on the Pu-species in the rainwater. After only 1 h of contact, between 33 and 40% of the plutonium was strongly bound to the soil components, i.e. only extractable with strong HNO3. The extraction of soil-bound Pu followed a similar pattern for all the original species, suggesting that the next step of Pu interaction mechanism with soil was rather independent of the original species. For both the Pu(V,VI) and Pu-organic species, the rainwater-desorption extract gave consistently higher KD values than that calculated from the rainwater-sorption data; whereas for Pu(III,IV), desorption KD values were more similar to sorption KD values. This supports the suggestion that the observed difference in Pu adsorption to soils reflects Pu-speciation in the water soluble phase, and that actual soil-Pu interactions are rather independent of the original speciation. Modelling of the extraction data show a different in association rate for the different Pu species, where the Pu(III,IV) has the fastest association rate as expected.

Effects of Disturbances on Vegetation Composition and Permafrost Thaw in Boreal Forests and Tundra Ecosystems of the Siberian Arctic

NASA Astrophysics Data System (ADS)

Ramos, E.; Alexander, H. D.; Natali, S.

2014-12-01

In Arctic ecosystems, climate-driven changes to the thermal regime of permafrost soils have the potential to create surface disturbances that influence vegetation dynamics and underlying soil properties. Disturbance-mediated changes in vegetation are important because vegetation and the accumulation of soil organic matter drive ecosystem carbon (C) dynamics and contribute to the insulation of soils and protection of permafrost from thaw. We examined the effect of two disturbance types—thermokarsts and frost boils—to determine disturbance effects on the vegetation community and soil properties in northeast Siberia. In summer 2014, we measured vegetation cover, soil moisture, soil temperature, and thaw depth in two thermokarst sites within boreal forests, two frost boil sites in tundra, and in adjacent undisturbed sites within both ecosystems. Both thermokarst and frost boils resulted in decreased vegetation cover and greater exposure of mineral soils (10-40% bare soils vs. 0% in undisturbed), and consequently, 2-3 times higher soil temperature and deeper thaw depth. Compared to undisturbed areas, soil moisture was 3-4 times higher in thermokarst areas but 1.2-2 times lower in frost boil areas, which reflected differences in microtopography between these two disturbance types. In both thermokarst and frost boil disturbed areas, deciduous and evergreen shrubs covered only 5 and 10%, respectively, compared to approximately 10 and 20%, respectively, in undisturbed areas. In general, graminoids were substantially more abundant (2-20 times) in disturbed areas than in those undisturbed. These results highlight important linkages between disturbances, vegetation communities, and permafrost soils, and contribute to our understanding of how changes in arctic vegetation dynamics as direct and/or indirect consequences of climate change have the potential to impact permafrost C pools.

Manure-amended soil characteristics affecting the survival of E. coli O157:H7 in 36 Dutch soils.

PubMed

Franz, Eelco; Semenov, Alexander V; Termorshuizen, Aad J; de Vos, O J; Bokhorst, Jan G; van Bruggen, Ariena H C

2008-02-01

The recent increase in foodborne disease associated with the consumption of fresh vegetables stresses the importance of the development of intervention strategies that minimize the risk of preharvest contamination. To identify risk factors for Escherichia coli O157:H7 persistence in soil, we studied the survival of a Shiga-toxin-deficient mutant in a set of 36 Dutch arable manure-amended soils (organic/conventional, sand/loam) and measured an array of biotic and abiotic manure-amended soil characteristics. The Weibull model, which is the cumulative form of the underlying distribution of individual inactivation kinetics, proved to be a suitable model for describing the decline of E. coli O157:H7. The survival curves generally showed a concave curvature, indicating changes in biological stress over time. The calculated time to reach the detection limit ttd ranged from 54 to 105 days, and the variability followed a logistic distribution. Due to large variation among soils of each management type, no differences were observed between organic and conventional soils. Although the initial decline was faster in sandy soils, no significant differences were observed in ttd between both sandy and loamy soils. With sandy, loamy and conventional soils, the variation in ttd was best explained by the level of dissolved organic carbon per unit biomass carbon DOC/biomC, with prolonged survival at increasing DOC/biomC. With organic soils, the variation in ttd was best explained by the level of dissolved organic nitrogen (positive relation) and the microbial species diversity as determined by denaturing gradient gel electrophoresis (negative relation). Survival increased with a field history of low-quality manure (artificial fertilizer and slurry) compared with high-quality manure application (farmyard manure and compost). We conclude that E. coli O157:H7 populations decline faster under more oligotrophic soil conditions, which can be achieved by the use of organic fertilizer with a relatively high C/N ratio and consequently a relatively low rate of nutrient release.

A method for predicting the factor of safety of an infinite slope based on the depth ratio of the wetting front induced by rainfall infiltration

NASA Astrophysics Data System (ADS)

Chae, B.-G.; Lee, J.-H.; Park, H.-J.; Choi, J.

2015-08-01

Most landslides in Korea are classified as shallow landslides with an average depth of less than 2 m. These shallow landslides are associated with the advance of a wetting front in the unsaturated soil due to rainfall infiltration, which results in an increase in water content and a reduction in the matric suction in the soil. Therefore, this study presents a modified equation of infinite slope stability analysis based on the concept of the saturation depth ratio to analyze the slope stability change associated with the rainfall on a slope. A rainfall infiltration test in unsaturated soil was performed using a column to develop an understanding of the effect of the saturation depth ratio following rainfall infiltration. The results indicated that the rainfall infiltration velocity due to the increase in rainfall in the soil layer was faster when the rainfall intensity increased. In addition, the rainfall infiltration velocity tends to decrease with increases in the unit weight of soil. The proposed model was applied to assess its feasibility and to develop a regional landslide susceptibility map using a geographic information system (GIS). For that purpose, spatial databases for input parameters were constructed and landslide locations were obtained. In order to validate the proposed approach, the results of the proposed approach were compared with the landslide inventory using a ROC (receiver operating characteristics) graph. In addition, the results of the proposed approach were compared with the previous approach used: a steady-state hydrological model. Consequently, the approach proposed in this study displayed satisfactory performance in classifying landslide susceptibility and showed better performance than the steady-state approach.

A meta-analysis of soil microbial biomass responses to forest disturbances

PubMed Central

Holden, Sandra R.; Treseder, Kathleen K.

2013-01-01

Climate warming is likely to increase the frequency and severity of forest disturbances, with uncertain consequences for soil microbial communities and their contribution to ecosystem C dynamics. To address this uncertainty, we conducted a meta-analysis of 139 published soil microbial responses to forest disturbances. These disturbances included abiotic (fire, harvesting, storm) and biotic (insect, pathogen) disturbances. We hypothesized that soil microbial biomass would decline following forest disturbances, but that abiotic disturbances would elicit greater reductions in microbial biomass than biotic disturbances. In support of this hypothesis, across all published studies, disturbances reduced soil microbial biomass by an average of 29.4%. However, microbial responses differed between abiotic and biotic disturbances. Microbial responses were significantly negative following fires, harvest, and storms (48.7, 19.1, and 41.7% reductions in microbial biomass, respectively). In contrast, changes in soil microbial biomass following insect infestation and pathogen-induced tree mortality were non-significant, although biotic disturbances were poorly represented in the literature. When measured separately, fungal and bacterial responses to disturbances mirrored the response of the microbial community as a whole. Changes in microbial abundance following disturbance were significantly positively correlated with changes in microbial respiration. We propose that the differential effect of abiotic and biotic disturbances on microbial biomass may be attributable to differences in soil disruption and organic C removal from forests among disturbance types. Altogether, these results suggest that abiotic forest disturbances may significantly decrease soil microbial abundance, with corresponding consequences for microbial respiration. Further studies are needed on the effect of biotic disturbances on forest soil microbial communities and soil C dynamics. PMID:23801985

Alteration of soil water content consequent to root-pruning at a windbreak/crop interface in Nebraska, USA

Treesearch

Qingjiang Hou; James Brandle; Kenneth Hubbard; Michele Schoeneberger; Carlos Nieto; Charles Francis

2003-01-01

Root-pruning is generally recommended as an appropriate treatment to reduce competition for soil water and/or nutrients and suppression of crop yield in areas adjacent to windbreaks. Several recent studies suggest, however, that factors other than soil water might be causing yield reduction at the interface. For two consecutive years, we evaluated root-pruning effects...

Earthworm influence on N availability and the growth of Cecropia schreberiana in tropical pasture and forest soils

Treesearch

G. Gonzalez; X. Zou

1999-01-01

This greenhouse study examines the effects of Pontoscolex corethrurus on the growth of Cecropia scheberiana in forest and pasture soils. Four treatments (0, 2, 20 worms and 0 worms + urea fertilizer) were applied to the soils to test if earthworms affect nitrogen availability, and consequently the growth of C. scheberiana. We recorded the number of seedlings, leaves,...

Movement and persistence of aldicarb in certain soils.

PubMed

Coppedge, J R; Bull, D L; Ridgway, R L

1977-01-01

When the rate of movement and the persistence of aldicarb in 4 types of soils were investigated in laboratory and field studies some leaching was detected in coarse sand; however, leaching was quite limited in clay loam and muck soils. These data indicated that aldicarb degraded quite rapidly in the selected soils and most of the applied radioactivity volatilized from these soil columns as 14CO2. The evolution of 14CO2 from the treated soil suggested severe degradation of the aldicarb molecule and consequently provided indirect evidence against the accumulation of significant quantities of toxic metabolites in the soil types evaluated. Under field conditions this toxicant appeared to have a half-life of about 7 days in loam soil.

Relating coccidioidomycosis (Valley Fever) incidence via to soil moisture conditions

USDA-ARS?s Scientific Manuscript database

Coccidioidomycosis (also called Valley fever) is caused by a soil-borne fungus, Coccidioides spp., in arid regions of the southwestern United States. Though some who develop infections from this fungus remain asymptomatic, others develop respiratory disease as a consequence. Less commonly, severe ...

Ecohydrologic processes and soil thickness feedbacks control limestone-weathering rates in a karst landscape

DOE PAGES

Dong, Xiaoli; Cohen, Matthew J.; Martin, Jonathan B.; ...

2018-05-18

Here, chemical weathering of bedrock plays an essential role in the formation and evolution of Earth's critical zone. Over geologic time, the negative feedback between temperature and chemical weathering rates contributes to the regulation of Earth climate. The challenge of understanding weathering rates and the resulting evolution of critical zone structures lies in complicated interactions and feedbacks among environmental variables, local ecohydrologic processes, and soil thickness, the relative importance of which remains unresolved. We investigate these interactions using a reactive-transport kinetics model, focusing on a low-relief, wetland-dominated karst landscape (Big Cypress National Preserve, South Florida, USA) as a case study.more » Across a broad range of environmental variables, model simulations highlight primary controls of climate and soil biological respiration, where soil thickness both supplies and limits transport of biologically derived acidity. Consequently, the weathering rate maximum occurs at intermediate soil thickness. The value of the maximum weathering rate and the precise soil thickness at which it occurs depend on several environmental variables, including precipitation regime, soil inundation, vegetation characteristics, and rate of groundwater drainage. Simulations for environmental conditions specific to Big Cypress suggest that wetland depressions in this landscape began to form around beginning of the Holocene with gradual dissolution of limestone bedrock and attendant soil development, highlighting large influence of age-varying soil thickness on weathering rates and consequent landscape development. While climatic variables are often considered most important for chemical weathering, our results indicate that soil thickness and biotic activity are equally important. Weathering rates reflect complex interactions among soil thickness, climate, and local hydrologic and biotic processes, which jointly shape the supply and delivery of chemical reactants, and the resulting trajectories of critical zone and karst landscape development.« less

Ecohydrologic processes and soil thickness feedbacks control limestone-weathering rates in a karst landscape

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dong, Xiaoli; Cohen, Matthew J.; Martin, Jonathan B.

Here, chemical weathering of bedrock plays an essential role in the formation and evolution of Earth's critical zone. Over geologic time, the negative feedback between temperature and chemical weathering rates contributes to the regulation of Earth climate. The challenge of understanding weathering rates and the resulting evolution of critical zone structures lies in complicated interactions and feedbacks among environmental variables, local ecohydrologic processes, and soil thickness, the relative importance of which remains unresolved. We investigate these interactions using a reactive-transport kinetics model, focusing on a low-relief, wetland-dominated karst landscape (Big Cypress National Preserve, South Florida, USA) as a case study.more » Across a broad range of environmental variables, model simulations highlight primary controls of climate and soil biological respiration, where soil thickness both supplies and limits transport of biologically derived acidity. Consequently, the weathering rate maximum occurs at intermediate soil thickness. The value of the maximum weathering rate and the precise soil thickness at which it occurs depend on several environmental variables, including precipitation regime, soil inundation, vegetation characteristics, and rate of groundwater drainage. Simulations for environmental conditions specific to Big Cypress suggest that wetland depressions in this landscape began to form around beginning of the Holocene with gradual dissolution of limestone bedrock and attendant soil development, highlighting large influence of age-varying soil thickness on weathering rates and consequent landscape development. While climatic variables are often considered most important for chemical weathering, our results indicate that soil thickness and biotic activity are equally important. Weathering rates reflect complex interactions among soil thickness, climate, and local hydrologic and biotic processes, which jointly shape the supply and delivery of chemical reactants, and the resulting trajectories of critical zone and karst landscape development.« less

Soil Organic Carbon and Its interaction with Minerals in Two Hillslopes with Different Climates and Erosion Processes

NASA Astrophysics Data System (ADS)

Wang, X.; Yoo, K.; Wackett, A. A.; Gutknecht, J.; Amundson, R.; Heimsath, A. M.

2017-12-01

Climate and topography have been widely recognized as important factors regulating soil organic carbon (SOC) dynamics but their interactive effects on SOC storage and its pools remain poorly constrained. Here we aimed to evaluate SOC storages and carbon-mineral interactions along two hillslope transects with moderately different climates (MAP: 549 mm vs. 816 mm) in Southeastern Australia. We sampled soil along the convex (eroding)-to-convergent (depositional) continuum at each hillslope transect and conducted size and density fractionation of these samples. In responses to the difference in climate factor, SOC inventories of eroding soils were twice as large at the wetter site compared with the drier site but showed little difference between two sites in depositional soils. These trends in SOC inventories were primarily controlled by SOC concentrations and secondarily by soil thicknesses. Similar patterns were observed for mineral associated organic carbon (MOC), and the abundances of MOC were controlled by the two independently operating processes affecting MOC concentration and fine-heavy fraction minerals. The contents and species of secondary clay and iron oxide minerals, abundances of particulate organic carbon, and bioturbation affected MOC concentrations. In contrast, the abundances of fine-heavy fraction minerals were impacted by erosion mechanisms that uniquely responded to regional- and micro- climate conditions. Consequently, topographic influences on SOC inventories and carbon-mineral interactions were more strongly pronounced in the drier climate where vegetation and erosion mechanisms were sensitive to microclimate. Our results highlight the significance of understanding topography and erosional processes in capturing climatic effects on soil carbon dynamics.

Ecosystem nitrogen fixation throughout the snow-free period in subarctic tundra: effects of willow and birch litter addition and warming.

PubMed

Rousk, Kathrin; Michelsen, Anders

2017-04-01

Nitrogen (N) fixation in moss-associated cyanobacteria is one of the main sources of available N for N-limited ecosystems such as subarctic tundra. Yet, N 2 fixation in mosses is strongly influenced by soil moisture and temperature. Thus, temporal scaling up of low-frequency in situ measurements to several weeks, months or even the entire growing season without taking into account changes in abiotic conditions cannot capture the variation in moss-associated N 2 fixation. We therefore aimed to estimate moss-associated N 2 fixation throughout the snow-free period in subarctic tundra in field experiments simulating climate change: willow (Salix myrsinifolia) and birch (Betula pubescens spp. tortuosa) litter addition, and warming. To achieve this, we established relationships between measured in situ N 2 fixation rates and soil moisture and soil temperature and used high-resolution measurements of soil moisture and soil temperature (hourly from May to October) to model N 2 fixation. The modelled N 2 fixation rates were highest in the warmed (2.8 ± 0.3 kg N ha -1 ) and birch litter addition plots (2.8 ± 0.2 kg N ha -1 ), and lowest in the plots receiving willow litter (1.6 ± 0.2 kg N ha -1 ). The control plots had intermediate rates (2.2 ± 0.2 kg N ha -1 ). Further, N 2 fixation was highest during the summer in the warmed plots, but was lowest in the litter addition plots during the same period. The temperature and moisture dependence of N 2 fixation was different between the climate change treatments, indicating a shift in the N 2 fixer community. Our findings, using a combined empirical and modelling approach, suggest that a longer snow-free period and increased temperatures in a future climate will likely lead to higher N 2 fixation rates in mosses. Yet, the consequences of increased litter fall on moss-associated N 2 fixation due to shrub expansion in the Arctic will depend on the shrub species' litter traits. © 2016 John Wiley & Sons Ltd.

Extreme magnitude earthquakes and their economical impact: The Mexico City case

NASA Astrophysics Data System (ADS)

Chavez, M.; Mario, C.

2005-12-01

The consequences (estimated by the human and economical losses) of the recent occurrence (worldwide) of extreme magnitude (for the region under consideration) earthquakes, such as the 19 09 1985 in Mexico (Ritchter magnitude Ms 8.1, moment magnitude Mw 8.01), or the one in Indonesia of the 26 12 2004 (Ms 9.4, Mw 9.3), stress the importance of performing seismic hazard analysis that, specifically, incorporate this possibility. Herewith, we present and apply a methodology, based on plausible extreme seismic scenarios and the computation of their associated synthetic accelerograms, to estimate the seismic hazard on Mexico City (MC) stiff and compressible surficial soils. The uncertainties about the characteristics of the potential finite seismic sources, as well as those related to the dynamic properties of MC compressible soils are taken into account. The economic consequences (i.e. the seismic risk = seismic hazard x economic cost) implicit in the seismic coefficients proposed in MC seismic Codes before (1976) and after the 1985 earthquake (2004) are analyzed. Based on the latter and on an acceptable risk criterion, a maximum seismic coefficient (MSC) of 1.4g (g = 9.81m/s2) of the elastic acceleration design spectra (5 percent damping), which has a probability of exceedance of 2.4 x 10-4, seems to be appropriate for analyzing the seismic behavior of infrastructure located on MC compressible soils, if extreme Mw 8.5 subduction thrust mechanism earthquakes (similar to the one occurred on 19 09 1985 with an observed, equivalent, MSC of 1g) occurred in the next 50 years.

Past Holocene detritism quantification and modeling from lacustrine archives in order to deconvoluate human-climate interactions on natural ecosystem over long time-scale

NASA Astrophysics Data System (ADS)

Simonneau, Anaëlle; Chapron, Emmanuel; Di Giovanni, Christian; Galop, Didier; Darboux, Frédéric

2014-05-01

Water budget is one of the main challenges to paleoclimate researchers in relation to present-day global warming and its consequences for human societies. Associated soil degradation and erosion are thereby becoming a major concern in many parts of the world and more particularly in the Alps. Moreover, humans are considered as geomorphologic agents since few thousand years and it is now recognized that such an impact on natural ecosystem profoundly modified soils properties as well as aquatic ecosystems dynamics over long-term periods. The quantification of such inference over long time-scale is therefore essential to establish new policies to reduce mechanic soil erosion, which is one of the dominant processes in Europe, and anticipate the potential consequences of future climate change on hydric erosion. The mechanical erosion of continental surfaces results from climatic forcing, but can be amplified by the anthropogenic one. We therefore suggest that quantifying and modelling soil erosion processes within comparable Holocene lacustrine archives, allows to estimate and date which and when past human activities have had an impact on soil fluxes over the last 10000 years. Based on the present-day geomorphology of the surrounding watershed and the evolution of the vegetation cover during the Holocene, we develop an interdisciplinary approach combining quantitative organic petrography (i.e. optical characterization and quantification of soil particles within lake sediments) with high-resolution seismic profiling, age-depth models on lacustrine sediment cores and soil erosional susceptibility modeling, in order to estimate the annual volume of soil eroded over the last 10000 years, and in fine to quantify the volume of human-induced soil erosion during the Holocene period. This method is applied to close but contrasted mountainous lacustrine environments from the western French Alps: lakes Blanc Huez and Paladru, sensitive to same climatic influences but where past human activities were different (mining versus agriculture, respectively). Lakes Blanc Huez and Paladru are defined by good Holocene chronologies and well detailed lithologies (1, 2). Both archaeological evidences and interdisciplinary characterizations of the two systems demonstrated that Lake Blanc Huez sedimentary infill is only sensitive to climate forcing and that soil fluxes are therefore only proportional to snow and/or water rainfalls (1), whereas the sedimentation recorded within Lake Paladru results both from climate and anthropogenic forcing. Results demonstrate that around Lake Paladru, human-induced soil erosion is effective since the Neolithic period and the beginning of agrarian activities (2). Following our quantification and modelling, human activities were able to explain up to 50% of soil fluxes in particular between the Bronze Age and the Middle Age suggesting that the actual geomorphology of the drainage basin is inherited from several millenary and not only from modern activities. (1) Simonneau et al., accepted, Quaternary Science Reviews (2) Simonneau et al., 2013, Journal of Archaeological Science, 40: 1636-1645.

Species-specific effects of soil fauna on fungal foraging and decomposition.

PubMed

Crowther, Thomas W; Boddy, Lynne; Jones, T Hefin

2011-10-01

Decomposer fungi are primary decomposing agents in terrestrial soils. Their mycelial networks play an important role in nutrient mineralisation and distribution, but are also nutritious resources for various soil invertebrates. Global climate change is predicted to alter the diversity and community composition of these soil fauna. To understand whether changes in invertebrate species diversity are likely to affect fungal-mediated decomposition, this study compared the grazing potentials of different invertebrate taxa and functional groups. Specifically, the grazing impacts of seven invertebrate taxa on the growth and spatial distribution of six basidiomycete fungi growing from beech wood blocks in soil microcosms were explored. Wood decay rates by fungi were also compared. The consequences of grazing were both taxon- and species-specific. Generally, macro-invertebrates caused the greatest damage, while meso- and micro-invertebrates often stimulated mycelial growth. Invertebrate size, preferences and population dynamics are likely to influence grazing potentials. Effects of grazing varied between fungi, with mycelial morphology and biochemistry possibly influencing susceptibility. Heavy grazing indirectly increased fungal-mediated wood decomposition. Changes in invertebrate community composition are predicted to have consequences for fungal growth, activity and community structure in woodland soils. Abiotic climate change factors including CO(2) and temperature affect mycelial productivity directly, but the indirect effects, mediated through changes in the soil invertebrate community, may be equally important in controlling ecosystem functioning.

Soil organic carbon pools and stocks in permafrost-affected soils on the tibetan plateau.

PubMed

Dörfer, Corina; Kühn, Peter; Baumann, Frank; He, Jin-Sheng; Scholten, Thomas

2013-01-01

The Tibetan Plateau reacts particularly sensitively to possible effects of climate change. Approximately two thirds of the total area is affected by permafrost. To get a better understanding of the role of permafrost on soil organic carbon pools and stocks, investigations were carried out including both discontinuous (site Huashixia, HUA) and continuous permafrost (site Wudaoliang, WUD). Three organic carbon fractions were isolated using density separation combined with ultrasonic dispersion: the light fractions (<1.6 g cm(-3)) of free particulate organic matter (FPOM) and occluded particulate organic matter (OPOM), plus a heavy fraction (>1.6 g cm(-3)) of mineral associated organic matter (MOM). The fractions were analyzed for C, N, and their portion of organic C. FPOM contained an average SOC content of 252 g kg(-1). Higher SOC contents (320 g kg(-1)) were found in OPOM while MOM had the lowest SOC contents (29 g kg(-1)). Due to their lower density the easily decomposable fractions FPOM and OPOM contribute 27% (HUA) and 22% (WUD) to the total SOC stocks. In HUA mean SOC stocks (0-30 cm depth) account for 10.4 kg m(-2), compared to 3.4 kg m(-2) in WUD. 53% of the SOC is stored in the upper 10 cm in WUD, in HUA only 39%. Highest POM values of 36% occurred in profiles with high soil moisture content. SOC stocks, soil moisture and active layer thickness correlated strongly in discontinuous permafrost while no correlation between SOC stocks and active layer thickness and only a weak relation between soil moisture and SOC stocks could be found in continuous permafrost. Consequently, permafrost-affected soils in discontinuous permafrost environments are susceptible to soil moisture changes due to alterations in quantity and seasonal distribution of precipitation, increasing temperature and therefore evaporation.

Challenges in Developing Models Describing Complex Soil Systems

NASA Astrophysics Data System (ADS)

Simunek, J.; Jacques, D.

2014-12-01

Quantitative mechanistic models that consider basic physical, mechanical, chemical, and biological processes have the potential to be powerful tools to integrate our understanding of complex soil systems, and the soil science community has often called for models that would include a large number of these diverse processes. However, once attempts have been made to develop such models, the response from the community has not always been overwhelming, especially after it discovered that these models are consequently highly complex, requiring not only a large number of parameters, not all of which can be easily (or at all) measured and/or identified, and which are often associated with large uncertainties, but also requiring from their users deep knowledge of all/most of these implemented physical, mechanical, chemical and biological processes. Real, or perceived, complexity of these models then discourages users from using them even for relatively simple applications, for which they would be perfectly adequate. Due to the nonlinear nature and chemical/biological complexity of the soil systems, it is also virtually impossible to verify these types of models analytically, raising doubts about their applicability. Code inter-comparisons, which is then likely the most suitable method to assess code capabilities and model performance, requires existence of multiple models of similar/overlapping capabilities, which may not always exist. It is thus a challenge not only to developed models describing complex soil systems, but also to persuade the soil science community in using them. As a result, complex quantitative mechanistic models are still an underutilized tool in soil science research. We will demonstrate some of the challenges discussed above on our own efforts in developing quantitative mechanistic models (such as HP1/2) for complex soil systems.

Positive versus negative environmental impacts of tree encroachment in South Africa

NASA Astrophysics Data System (ADS)

Grellier, Séraphine; Ward, David; Janeau, Jean-Louis; Podwojewski, Pascal; Lorentz, Simon; Abbadie, Luc; Valentin, Christian; Barot, Sébastien

2013-11-01

Woody plant encroachment in grasslands is a worldwide phenomenon. Despite many studies, the consequences of woody plant encroachment on sub-canopy vegetation and soil properties are still unclear. To better understand the impacts of trees on grassland properties we examined the following questions using a mountainous sub-tropical grassland of South Africa encroached by an indigenous tree, Acacia sieberiana as a case study: (1) Do trees increase sub-canopy herbaceous diversity, quality and biomass and soil nitrogen content? (2) Do large trees have a stronger effect than medium-sized trees on grass and soil properties? (3) Does the impact of trees change with the presence of livestock and position of trees in a catena? We studied grass and non-graminoid species diversity and biomass, grass quality and soil properties during the wet season of 2009. Nitrogen in grass leaves, soil cation exchange capacity and calcium and magnesium ion concentrations in the soil increased under tall Acacia versus open areas. Medium-sized Acacia decreased the gross energy content, digestibility and neutral detergent fibre of grasses but increased the species richness of non-graminoids. Tall and medium Acacia trees were associated with the presence of Senecio inaequidens, an indigenous species that is toxic to horses and cattle. The presence of livestock resulted in a decrease in herbaceous root biomass and an increase in soil carbon and leaf biomass of grass under Acacia. Tree position in the catena did not modify the impact of trees on the herbaceous layer and soil properties. For management of livestock we recommend retaining tall Acacia trees and partially removing medium-sized Acacia trees because the latter had negative effects on grass quality.

Health risk characterization of maximum legal exposures for persistent organic pollutant (POP) pesticides in residential soil: An analysis.

PubMed

Li, Zijian

2018-01-01

Regulations for pesticides in soil are important for controlling human health risk; humans can be exposed to pesticides by ingesting soil, inhaling soil dust, and through dermal contact. Previous studies focused on analyses of numerical standard values for pesticides and evaluated the same pesticide using different standards among different jurisdictions. To understand the health consequences associated with pesticide soil standard values, lifetime theoretical maximum contribution and risk characterization factors were used in this study to quantify the severity of damage using disability-adjusted life years (DALYs) under the maximum "legal" exposure to persistent organic pollutant (POP) pesticides that are commonly regulated by the Stockholm Convention. Results show that computed soil characterization factors for some pesticides present lognormal distributions, and some of them have DALY values higher than 1000.0 per million population (e.g., the DALY for dichlorodiphenyltrichloroethane [DDT] is 14,065 in the Netherlands, which exceeds the tolerable risk of uncertainty upper bound of 1380.0 DALYs). Health risk characterization factors computed from national jurisdictions illustrate that values can vary over eight orders of magnitude. Further, the computed characterization factors can vary over four orders of magnitude within the same national jurisdiction. These data indicate that there is little agreement regarding pesticide soil regulatory guidance values (RGVs) among worldwide national jurisdictions or even RGV standard values within the same jurisdiction. Among these POP pesticides, lindane has the lowest median (0.16 DALYs) and geometric mean (0.28 DALYs) risk characterization factors, indicating that worldwide national jurisdictions provide relatively conservative soil RGVs for lindane. In addition, we found that some European nations and members of the former Union of Soviet Socialist Republics share the same pesticide RGVs and data clusters for the computed characterization factors. Copyright © 2017 Elsevier Ltd. All rights reserved.

Soil information in the Strategic Environmental Assessment of Rural Development Plans

NASA Astrophysics Data System (ADS)

Costantini, Edoardo

2016-04-01

Soil information is essential for land planning at different administrative levels. Currently, in Europe there is a hierarchy of at least seven main territorial administrative entities which consider soil in their land planning policies. In this study, European, national and regional regulations that affect soil are discussed, considering themes, priorities, and focus areas. A better attention on the Strategic Environmental Assessment (SEA) of the Rural Development Plans (RDP) 2014-2020 is given, by analysing the Environmental Reports produced in the framework of the SEA of the RDP 2014-2020 of some European Regions. Both old and new soil indicators are introduced, as well as the consequences of their adoption for soil science and soil scientists. It is evident from this study that soil information is treated very variably, not only because of the different kinds of available information, but mainly as a consequence of the expertise and sensitivity to the soil issues of the authors, since they can be different kinds of public or private bodies hired by regional authorities. Therefore, despite having the same reference, the SEAs are very different. In most cases, the amount of soil information is little or negligible, even when available. The ex-ante impacts are often only qualitative, or quantified only in terms of the areal extent of applied measures. On the other hand, following the European recommendations, the ongoing and ex-post reports of the monitoring activities of RDP are expected to provide a wealth of soil information, both qualitative and quantitative. Soil scientists, soil and water conservationists, and management experts will be requested to provide more sophisticated and dynamic types of information. Therefore, the SEA of RDP and similar land planning activities will provide greater scientific and technical opportunities for soil science, provided that the public bodies in charge of evaluations, namely Member States, Regions and their auditing counterparts within the European Commission, are able to implement their own recommendations.

Do anaerobic digestates promote dispersion, acidification and water repellency in soils?

NASA Astrophysics Data System (ADS)

Voelkner, Amrei; Holthusen, Dörthe; Horn, Rainer

2014-05-01

Digestates are used as organic fertilizer on agricultural land due to their high amounts of nutrients (e.g. potassium, sodium). It is commonly expected that the application of sludge derived from anaerobic digestion can influence the soil structure and soil stability. Due to the fact that digestates contain large quantities of monovalent salts and long-chained fatty acids, the consequence of sludge amendment can be soil degradation caused by acidification, dispersion and increased water-repellency. Thus, water infiltration can be impeded which results in a preservation of stable soil aggregates. However, a diminished water infiltration can support water erosion and preferential flow of easy soluble nutrients into the groundwater. Our research was conducted with different digestates derived from maize, wheat and sugar beet to examine occurring processes in soils of two different textures after the application of anaerobic sludges. Particularly, we focused on the wetting properties of the soil. For this purpose, the wetting behavior was investigated by determining the sorptivity-based Repellency Index with moist samples and the contact angle with homogenized, air-dried soil material. Further surveys were carried out to assess the flow behavior of digestates application and the deformation of the particle-to-particle association by microscaled shearing. Additionally, the acidification process in the soil as a result of sludge application was investigated. To account for the dispersive impact of digestates, the turbidity of soil suspensions was ascertained. We summarize from the results that the digestates have a clear impact on the water repellency of the soil. We recognized a shift to more hydrophobic conditions. Partially, the pH remains on a high level due to the alkaline digestate, but several samples show a decline of pH, depending on the soil texture, respectively. However, soil structure was weakened as was shown by an increase of turbidity. As a conclusion, we point out the necessity to take into account the impact which anaerobic digestates might have on soil structure and stability in addition to their fertilizing effect to sustain the soil in a good state.

THE ARS-MISSOURI SOIL STRENGTH PROFILE SENSOR: CURRENT STATUS AND FUTURE PROSPECTS

USDA-ARS?s Scientific Manuscript database

Soil compaction that is induced by tillage and traction is an ongoing concern in crop production, and also has environmental consequences. Although cone penetrometers provide standardized compaction measurements, the pointwise data collected makes it difficult to obtain enough data to represent with...

Simulating the Transport and Fate of Trifluralin in Soil

Treesearch

Ying Ouyang; Jia-En Zhang; Li Hua Cui; Peter Nkedi-Kizza

2012-01-01

Understanding herbicide dynamics in agricultural soils is crucial to evaluate herbicide application efficiency and its environmental consequences. A model for herbicide trifluralin (α,α,α-reifluoro-2,6-dinitro-N,N-dipropyl-ρtoluidine) dynamics namely runoff, erosion, leaching, volatilization, and degradation losses in agricultural...

Improving ground cover monitoring for wind erosion assessment using MODIS BRDF parameters

USDA-ARS?s Scientific Manuscript database

Measuring and monitoring controls on wind erosion can facilitate detection and prediction of soil degradation important for food security. Ground cover is widely recognised as an important factor for controlling soil erosion by wind and water. Consequently, maintaining ground cover (e.g., vegetation...

Imprint of oaks on nitrogen availability and δ15N in California grassland-savanna: A case of enhanced N inputs?

USGS Publications Warehouse

Perakis, S.S.; Kellogg, C.H.

2007-01-01

Woody vegetation is distributed patchily in many arid and semi-arid ecosystems, where it is often associated with elevated nitrogen (N) pools and availability in islands of fertility. We measured N availability and δ15N in paired blue-oak versus annual grass dominated patches to characterize the causes and consequences of spatial variation in N dynamics of grassland-savanna in Sequoia-Kings Canyon National Park. We found significantly greater surface soil N pools (0–20 cm) in oak patches compared to adjacent grass areas across a 700 m elevation gradient from foothills to the savanna-forest boundary. N accumulation under oaks was associated with a 0.6‰ depletion in soil δ15N relative to grass patches. Results from a simple δ15N mass balance simulation model, constrained by surface soil N and δ15N measured in the field, suggest that the development of islands of N fertility under oaks can be traced primarily to enhanced N inputs. Net N mineralization and percent nitrification in laboratory incubations were consistently higher under oaks across a range of experimental soil moisture regimes, suggesting a scenario whereby greater N inputs to oak patches result in net N accumulation and enhanced N cycling, with a potential for greater nitrate loss as well. N concentrations of three common herbaceous annual plants were nearly 50% greater under oak than in adjacent grass patches, with community composition shifted towards more N-demanding species under oaks. We find that oaks imprint distinct N-rich islands of fertility that foster local feedback between soil N cycling, plant N uptake, and herbaceous community composition. Such patch-scale differences in N inputs and plant–soil interactions increase biogeochemical heterogeneity in grassland-savanna ecosystems and may shape watershed-level responses to chronic N deposition.

Ecosystem warming increases sap flow rates of northern red oak trees

DOE PAGES

Juice, Stephanie M.; Templer, Pamela H.; Phillips, Nathan G.; ...

2016-03-17

Over the next century, air temperature increases up to 5°C are projected for the northeastern United States. As evapotranspiration strongly influences water loss from terrestrial ecosystems, the ecophysiological response of trees to warming will have important consequences for forest water budgets. We measured growing season sap flow rates in mature northern red oak ( Quercus rubra L.) trees in a combined air (up to 5.5°C above ambient) and soil (up to 1.85°C above ambient at 6-cm depth) warming experiment at Harvard Forest, Massachusetts, United States. Through principal components analysis, we found air and soil temperatures explained the largest amount ofmore » variance in environmental variables associated with rates of sap flow, with relative humidity, photosynthetically active radiation and vapor pressure deficit having significant, but smaller, effects. On average, each 1°C increase in temperature increased sap flow rates by approximately 1100 kg H 2O m -2 sapwood area day-1 throughout the growing season and by 1200 kg H 2O m -2 sapwood area day -1 during the early growing season. Reductions in the number of cold winter days correlated positively with increased sap flow during the early growing season (a decrease in 100 heating-degree days was associated with a sapflow increase in approximately 5 kg H 2O m -2 sapwood area day -1). Soil moisture declined with increased treatment temperatures, and each soil moisture percentage decrease resulted in a decrease in sap flow of approximately 360 kg H2O m -22 sapwood area day -1. At night, soil moisture correlated positively with sap flow. Finally, these results demonstrate that warmer air and soil temperatures in winter and throughout the growing season lead to increased sap flow rates, which could affect forest water budgets throughout the year.« less

Wind Erosion Caused by Land Use Changes Significantly Reduces Ecosystem Carbon Storage and Carbon Sequestration Potentials in Grassland

NASA Astrophysics Data System (ADS)

Li, P.; Chi, Y. G.; Wang, J.; Liu, L.

2017-12-01

Wind erosion exerts a fundamental influence on the biotic and abiotic processes associated with ecosystem carbon (C) cycle. However, how wind erosion under different land use scenarios will affect ecosystem C balance and its capacity for future C sequestration are poorly quantified. Here, we established an experiment in a temperate steppe in Inner Mongolia, and simulated different intensity of land uses: control, 50% of aboveground vegetation removal (50R), 100% vegetation removal (100R) and tillage (TI). We monitored lateral and vertical carbon flux components and soil characteristics from 2013 to 2016. Our study reveals three key findings relating to the driving factors, the magnitude and consequence of wind erosion on ecosystem C balance: (1) Frequency of heavy wind exerts a fundamental control over the severity of soil erosion, and its interaction with precipitation and vegetation characteristics explained 69% variation in erosion intensity. (2) With increases in land use intensity, the lateral C flux induced by wind erosion increased rapidly, equivalent to 33%, 86%, 111% and 183% of the net ecosystem exchange of the control site under control, 50R, 100R and TI sites, respectively. (3) After three years' treatment, erosion induced decrease in fine fractions led to 31%, 43%, 85% of permanent loss of C sequestration potential in the surface 5cm soil for 50R, 100R and TI sites. Overall, our study demonstrates that lateral C flux associated with wind erosion is too large to be ignored. The loss of C-enriched fine particles not only reduces current ecosystem C content, but also results in irreversible loss of future soil C sequestration potential. The dynamic soil characteristics need be considered when projecting future ecosystem C balance in aeolian landscape. We also propose that to maintain the sustainability of grassland ecosystems, land managers should focus on implementing appropriate land use rather than rely on subsequent managements on degraded soils.

Fungal-to-bacterial dominance of soil detrital food-webs: Consequences for biogeochemistry

NASA Astrophysics Data System (ADS)

Rousk, Johannes; Frey, Serita

2015-04-01

Resolving fungal and bacterial groups within the microbial decomposer community is thought to capture disparate microbial life strategies, associating bacteria with an r-selected strategy for carbon (C) and nutrient use, and fungi with a K-selected strategy. Additionally, food-web models have established a widely held belief that the bacterial decomposer pathway in soil supports high turnover rates of easily available substrates, while the slower fungal pathway supports the decomposition of more complex organic material, thus characterising the biogeochemistry of the ecosystem. Three field-experiments to generate gradients of SOC-quality were assessed. (1) the Detritus Input, Removal, and Trenching - DIRT - experiment in a temperate forest in mixed hardwood stands at Harvard Forest LTER, US. There, experimentally adjusted litter input and root input had affected the SOC quality during 23 years. (2) field-application of 14-C labelled glucose to grassland soils, sampled over the course of 13 months to generate an age-gradient of SOM (1 day - 13 months). (3) The Park Grass Experiment at Rothamsted, UK, where 150-years continuous N-fertilisation (0, 50, 100, 150 kg N ha-1 y-1) has affected the quality of SOM in grassland soils. A combination of carbon stable and radio isotope studies, fungal and bacterial growth and biomass measurements, and C and N mineralisation (15N pool dilution) assays were used to investigate how SOC-quality influenced fungal and bacterial food-web pathways and the implications this had for C and nutrient turnover. There was no support that decomposer food-webs dominated by bacteria support high turnover rates of easily available substrates, while slower fungal-dominated decomposition pathways support the decomposition of more complex organic material. Rather, an association between high quality SOC and fungi emerges from the results. This suggests that we need to revise our basic understanding for soil microbial communities and the processes they regulate in soil.

Ecosystem warming increases sap flow rates of northern red oak trees

DOE Office of Scientific and Technical Information (OSTI.GOV)

Juice, Stephanie M.; Templer, Pamela H.; Phillips, Nathan G.

Over the next century, air temperature increases up to 5°C are projected for the northeastern United States. As evapotranspiration strongly influences water loss from terrestrial ecosystems, the ecophysiological response of trees to warming will have important consequences for forest water budgets. We measured growing season sap flow rates in mature northern red oak ( Quercus rubra L.) trees in a combined air (up to 5.5°C above ambient) and soil (up to 1.85°C above ambient at 6-cm depth) warming experiment at Harvard Forest, Massachusetts, United States. Through principal components analysis, we found air and soil temperatures explained the largest amount ofmore » variance in environmental variables associated with rates of sap flow, with relative humidity, photosynthetically active radiation and vapor pressure deficit having significant, but smaller, effects. On average, each 1°C increase in temperature increased sap flow rates by approximately 1100 kg H 2O m -2 sapwood area day-1 throughout the growing season and by 1200 kg H 2O m -2 sapwood area day -1 during the early growing season. Reductions in the number of cold winter days correlated positively with increased sap flow during the early growing season (a decrease in 100 heating-degree days was associated with a sapflow increase in approximately 5 kg H 2O m -2 sapwood area day -1). Soil moisture declined with increased treatment temperatures, and each soil moisture percentage decrease resulted in a decrease in sap flow of approximately 360 kg H2O m -22 sapwood area day -1. At night, soil moisture correlated positively with sap flow. Finally, these results demonstrate that warmer air and soil temperatures in winter and throughout the growing season lead to increased sap flow rates, which could affect forest water budgets throughout the year.« less

Remediation of cadmium-contaminated paddy soils by washing with chemicals: effect of soil washing on cadmium uptake by soybean.

PubMed

Maejima, Yuji; Makino, Tomoyuki; Takano, Hiroyuki; Kamiya, Takashi; Sekiya, Naoki; Itou, Tadashi

2007-03-01

We conducted a pot experiment to evaluate the effect of soil washing with CaCl(2) on Cd absorption by two soybean cultivars. The results were as follows: (1) Soybean growth was not significantly different in washed and unwashed soils, but the seed Cd concentration for both cultivars decreased significantly, up to 25%, in the washed soils compared with the unwashed soils. (2) In the washed soils, the Cd concentration in the soil solution indicated an obviously lower value from sowing to the flowering stage; however, the change in Cd speciation was not evident in the CaCl(2)-washed soil solution. Consequently, the effect of soil washing using CaCl(2) on Cd-contaminated paddy soils can be expected to continue after a CaCl(2)-washed paddy field is converted to an upland field.

Phytoremediation of Metal-Contaminated Soil for Improving Food Safety

NASA Astrophysics Data System (ADS)

Shilev, Stefan; Benlloch, Manuel; Dios-Palomares, R.; Sancho, Enrique D.

The contamination of the environment is a serious problem which provokes great interest in our society and in the whole scientific community. The input of metals into soils has increased during the last few decades as a consequence of different human activities (storage of industrial and municipal wastes, burning of fuels, mining and wastewater treatments, functioning of non-ferrous-metal-producing smelters, etc.). Nowadays, this type of contamination is one of the most serious concerning the chronic toxic effect which it renders on human health and the environment. As a consequence of all these activities, a huge number of toxic metals and metalloids, such as Cu, Zn, Pb, Cd, Hg and As, among many others, have been accumulated in soils, reaching toxic values. Unfortunately, much contaminated land is still in use for crop production, despite the danger that the metal content poses.

Soil Carbon Change and Net Energy Associated with Biofuel Production on Marginal Lands: A Regional Modeling Perspective

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bandaru, Varaprasad; Izaurralde, Roberto C.; Manowitz, David H.

2013-12-01

The use of marginal lands (MLs) for biofuel production has been contemplated as a promising solution for meeting biofuel demands. However, there have been concerns with spatial location of MLs, their inherent biofuel potential, and possible environmental consequences with the cultivation of energy crops. Here, we developed a new quantitative approach that integrates high-resolution land cover and land productivity maps and uses conditional probability density functions for analyzing land use patterns as a function of land productivity to classify the agricultural lands. We subsequently applied this method to determine available productive croplands (P-CLs) and non-crop marginal lands (NC-MLs) in amore » nine-county Southern Michigan. Furthermore, Spatially Explicit Integrated Modeling Framework (SEIMF) using EPIC (Environmental Policy Integrated Climate) was used to understand the net energy (NE) and soil organic carbon (SOC) implications of cultivating different annual and perennial production systems.« less

Correlated Biogeographic Variation of Magnesium across Trophic Levels in a Terrestrial Food Chain

PubMed Central

Sun, Xiao; Kay, Adam D.; Kang, Hongzhang; Small, Gaston E.; Liu, Guofang; Zhou, Xuan; Yin, Shan; Liu, Chunjiang

2013-01-01

Using samples from eastern China (c. 25 – 41° N and 99 – 123° E) and from a common garden experiment, we investigate how Mg concentration varies with climate across multiple trophic levels. In soils, plant tissue (Oriental oak leaves and acorns), and a specialist acorn predator (the weevil Curculio davidi), Mg concentration increased significantly with different slopes from south to north, and generally decreased with both mean annual temperature (MAT) and precipitation (MAP). In addition, soil, leaf, acorn and weevil Mg showed different strengths of association and sensitivity with climatic factors, suggesting that distinct mechanisms may drive patterns of Mg variation at different trophic levels. Our findings provide a first step toward determining whether anticipated changes in temperature and precipitation due to climate change will have important consequences for the bioavailability and distribution of Mg in food chain. PMID:24223807

Advances in Phytoremediation and Rhizoremediation

NASA Astrophysics Data System (ADS)

Macek, Tomas; Uhlik, Ondrej; Jecna, Katerina; Novakova, Martina; Lovecka, Petra; Rezek, Jan; Dudkova, Vlasta; Stursa, Petr; Vrchotova, Blanka; Pavlikova, Daniela; Demnerova, Katerina; Mackova, Martina

Phytoremediation, with the associated role of rhizospheric microorganisms, is an important tool in bioremediation processes. Plants have an inherent ability to detoxify some xenobiotics and remove compounds from soil by direct uptake of the contaminants followed by subsequent transformation, transport and product accumulation, using enzymes similar to detoxification enzymes in mammals. Being autotrophic organisms, plants do not utilize organic compounds for their energy and carbon metabolism. As a consequence, they usually lack the catabolic enzymes necessary to achieve full mineralization of organic molecules. Plants can be used for removal of both inorganic and organic xenobiotics present in the soil, water and air. The chapter summarizes the classical approaches and possibilities for increasing effectiveness of phyto-and rhizo-remediation using genetically modified organisms. Perspectives are presented related to the use of molecular methods, including metagenomics and stable isotope probing, for obtaining deeper knowledge with a view to influencing the composition of consortia of organisms living in the contaminated environment.

Soil, water, and vegetation conditions in south Texas

NASA Technical Reports Server (NTRS)

Wiegand, C. L.; Gausman, H. W.; Leamer, R. W.; Richardson, A. J.; Everitt, J. H.; Gerbermann, A. H. (Principal Investigator)

1976-01-01

The author has identified the following significant results. Field spectral measurements and laboratory densitometric measurements showed that tree canopy reflectance differences among the Marrs, Redblush, and Valencia varieties in the visible spectral region were due to their different leaf chlorophyll concentrations. Field measurements of visible light reflectance were directly related to the tonal responses on infrared color photos of the varietal tree canopies. Consequently, densitometric measurements of the foliage on the infrared color transparency with red-filtered light successfully discriminated among the three varieties. Reflectance measurements with a field spectroradiometer on nine dates the growing season of two wheat varieties, Milam and Penjamo, documented their spectra over the 0.45 to 2.50 micron wavelength interval associated with plant cover and physiological development. An image analyzer system was used to optically planimeter the percentage of soil background, vegetation and shadow in the vertical photographs taken within the FOV of the spectroradiometer on each measurement date.

Linking soil bacterial biodiversity and soil carbon stability.

PubMed

Mau, Rebecca L; Liu, Cindy M; Aziz, Maliha; Schwartz, Egbert; Dijkstra, Paul; Marks, Jane C; Price, Lance B; Keim, Paul; Hungate, Bruce A

2015-06-01

Native soil carbon (C) can be lost in response to fresh C inputs, a phenomenon observed for decades yet still not understood. Using dual-stable isotope probing, we show that changes in the diversity and composition of two functional bacterial groups occur with this 'priming' effect. A single-substrate pulse suppressed native soil C loss and reduced bacterial diversity, whereas repeated substrate pulses stimulated native soil C loss and increased diversity. Increased diversity after repeated C amendments contrasts with resource competition theory, and may be explained by increased predation as evidenced by a decrease in bacterial 16S rRNA gene copies. Our results suggest that biodiversity and composition of the soil microbial community change in concert with its functioning, with consequences for native soil C stability.

Climate change impacts on groundwater recharge- uncertainty, shortcomings, and the way forward?

NASA Astrophysics Data System (ADS)

Holman, I. P.

2006-06-01

An integrated approach to assessing the regional impacts of climate and socio-economic change on groundwater recharge is described from East Anglia, UK. Many factors affect future groundwater recharge including changed precipitation and temperature regimes, coastal flooding, urbanization, woodland establishment, and changes in cropping and rotations. Important sources of uncertainty and shortcomings in recharge estimation are discussed in the light of the results. The uncertainty in, and importance of, socio-economic scenarios in exploring the consequences of unknown future changes are highlighted. Changes to soil properties are occurring over a range of time scales, such that the soils of the future may not have the same infiltration properties as existing soils. The potential implications involved in assuming unchanging soil properties are described. To focus on the direct impacts of climate change is to neglect the potentially important role of policy, societal values and economic processes in shaping the landscape above aquifers. If the likely consequences of future changes of groundwater recharge, resulting from both climate and socio-economic change, are to be assessed, hydrogeologists must increasingly work with researchers from other disciplines, such as socio-economists, agricultural modellers and soil scientists.

Tillage effects on soil quality after three years of irrigation in Northern Spain

USDA-ARS?s Scientific Manuscript database

Irrigation is being initiated on large areas of traditionally rainfed land to meet increasing global demand for food, feed, fiber, and fuel. However, the consequences of this transition on soil quality (SQ) have scarcely been studied. Therefore, after previously identifying the most tillage-sensitiv...

Change in soil organic carbon after five years of continuous winter wheat or switchgrass

USDA-ARS?s Scientific Manuscript database

Perennial grasses have been promoted to supply cellulose for ethanol production but possible consequences on soil organic carbon (SOC) should be assessed before adoption in a given region. Specific objectives were to (i) compare above-ground biomass C production and depth distribution of SOC conten...

Effects of timber harvesting on the genetic potential for carbon and nitrogen cycling in five North American forest ecozones.

PubMed

Cardenas, Erick; Orellana, Luis H; Konstantinidis, Konstantinos T; Mohn, William W

2018-02-16

Forest ecosystems are critical to global biogeochemical cycles but under pressure from harvesting and climate change. We investigated the effects of organic matter (OM) removal during forest harvesting on the genetic potential of soil communities for biomass decomposition and nitrogen cycling in five ecozones across North America. We analyzed 107 samples, representing four treatments with varied levels of OM removal, at Long-Term Soil Productivity Study sites. Samples were collected more than ten years after harvesting and replanting and were analyzed via shotgun metagenomics. High-quality short reads totaling 1.2 Tbp were compared to the Carbohydrate Active Enzyme (CAZy) database and a custom database of nitrogen cycle genes. Gene profile variation was mostly explained by ecozone and soil layer. Eleven CAZy and nine nitrogen cycle gene families were associated with particular soil layers across all ecozones. Treatment effects on gene profiles were mainly due to harvesting, and only rarely to the extent of OM removal. Harvesting generally decreased the relative abundance of CAZy genes while increasing that of nitrogen cycle genes, although these effects varied among ecozones. Our results suggest that ecozone-specific nutrient availability modulates the sensitivity of the carbon and nitrogen cycles to harvesting with possible consequences for long-term forest sustainability.

Are Namibian “Fairy Circles” the Consequence of Self-Organizing Spatial Vegetation Patterning?

PubMed Central

Cramer, Michael D.; Barger, Nichole N.

2013-01-01

Causes of over-dispersed barren “fairy circles” that are often surrounded by ca. 0.5 m tall peripheral grasses in a matrix of shorter (ca. 0.2 m tall) grasses in Namibian grasslands remain mysterious. It was hypothesized that the fairy circles are the consequence of self-organizing spatial vegetation patterning arising from resource competition and facilitation. We examined the edaphic properties of fairy circles and variation in fairy circle size, density and landscape occupancy (% land surface) with edaphic properties and water availability at a local scale (<50 km) and with climate and vegetation characteristics at a regional scale. Soil moisture in the barren fairy circles declines from the center towards the periphery and is inversely correlated with soil organic carbon, possibly indicating that the peripheral grass roots access soil moisture that persists into the dry season within fairy circles. Fairy circle landscape occupancy is negatively correlated with precipitation and soil [N], consistent with fairy circles being the product of resource-competition. Regional fairy circle presence/absence is highly predictable using an empirical model that includes narrow ranges of vegetation biomass, precipitation and temperature seasonality as predictor variables, indicating that fairy circles are likely a climate-dependent emergent phenomenon. This dependence of fairy circle occurrence on climate explains why fairy circles in some locations may appear and disappear over time. Fairy circles are only over-dispersed at high landscape occupancies, indicating that inter-circle competition may determine their spacing. We conclude that fairy circles are likely to be an emergent arid-grassland phenomenon that forms as a consequence of peripheral grass resource-competition and that the consequent barren circle may provide a resource-reservoir essential for the survival of the larger peripheral grasses and provides a habitat for fossicking fauna. PMID:23976962

Pasture degradation in Tibet: Drivers, mechanisms and consequences for C stocks and ecosystem stability

NASA Astrophysics Data System (ADS)

Kuzyakov, Yakov; Schleuss, Per-Marten; Guggenberger, Georg; Miehe, Georg; Coners, Heinz; Foken, Thomas; Wesche, Karsten; Hafner, Silke; Biermann, Tobias; Babel, Wolfgang; Gerken, Tobias; Unteregelsbacher, Sebastian; Seeber, Elke; Spielvogel, Sandra; Ingrisch, Johannes; Li, Xiaogang; Yue, Sun; Li, Qianru; Xu, Xingliang

2017-04-01

Kobresia grasslands on Tibetan Plateau have accumulated tremendous organic carbon (C) stocks, are an important grazing ground for local herdsmen, host a major portion of the regional terrestrial biodiversity, and supply large areas of SE Asia with water. All these ecosystem functions are threatened by large-scale soil degradation on the Tibetan Plateau. Nonetheless, the patterns and mechanisms of Kobresia pasture degradation, visible across the entire Tibetan Plateau, remain unknown. In the K. pygmaea core area, we studied natural and anthropogenic drivers of pasture degradation to discover new mechanisms and associated processes of soil organic carbon (SOC) loss. We show that livestock overgrazing and trampling in recent decades have triggered grassland degradation by initiating plant death and reducing grassland recovery. Combined with the harsh climate, this destroys the protective Kobresia turf. Considering these processes as well as other anthropogenic and natural drivers, a novel pasture degradation concept was developed. Pasture soils corresponding to the fiwe degradation stages were sampled and analyzed for physical, chemical and biological properties. Soil drought and frost lead to polygonal cracking of the Kobresia turf, already weakened by overgrazing. This induces gradual erosion by wind and water, extends the cracks and removes the upper carbon-enriched soil. Erosion-derived SOC losses amount to 5 kg C m-2 and are aggravated by decreasing root C input and increased SOC mineralization (both ca. 2.5 kg C m-2). Mineralization-derived SOC loss was reflected by a negative δ13C shift of SOC going from intact to severely degraded stages, and was caused by a relative enrichment of 13C-depleted lignin. In sum, degradation has released tremendous amounts of carbon back into the atmosphere as CO2, or as increased sediment load in rivers, connected with declining water quality off-site. Affected by changed local water budget, the regional clouds' formation starts earlier and decreases the Kobresia pasture recovery potential. We conclude that the combined anthropogenic and natural impacts leading to pasture degradation have immense consequences for C sequestration, atmospheric CO2, water quality and ecosystem stability.

Sugarcane straw harvest effects on soil quality and plant growth: preliminary data synthesis of a multi-local project running in Brazil

NASA Astrophysics Data System (ADS)

Cherubin, Maurício; Cerri, Carlos E. P.; Feigl, Brigitte J.; Cerri, Carlos C.

2017-04-01

Brazil is the largest sugarcane producer in the world, and consequently, it is one of major players in the bioenergy production sector. Despite that, growing demands for bioenergies have raised the interest of Brazilian sugarcane industry to harvest the sugarcane straw left on the field for cellulosic ethanol production and/or bioelectricity cogeneration. However, crop residues have a key role in the soil, affecting directly or indirectly multiple soil functions and related ecosystem services. Therefore, indiscriminate straw harvest could jeopardize soil quality, decreasing its capacity to sustain plant productivity over time. In order to evaluate the potential impacts of sugarcane straw harvest on soil quality and plant growth, we are conducting since 2014 a multi-local project across central-southern Brazil, the main core of sugarcane production in the world. A wide range of soil chemical, physical and biological parameters, as well as, plant biomass production has been quantified under increasing straw harvest intensities. Our preliminary findings have showed that short-term straw harvest management did not affect total organic C stocks; however, high straw harvest led to significant reduction in labile C forms (e.g., microbial biomass C and N), and abundance of microbial communities as well. Sugarcane straw harvest affects soil nutrient cycling, since significant amount of nutrients are removed annually by straw, especially in top (green) leaves. In addition, our data show that straw acts as a thermal insulator, decreasing soil temperature amplitude and keeping soil moisture for a longer time. Straw harvest management did not affect sugarcane yields in the first two crop seasons. Based on this first synthesis of the project, we conclude that short-term sugarcane straw harvest led to soil changes, especially in more sensitive and dynamic properties, which did not affect the plant yield. However, long-term impacts should be monitored towards a better understanding about potential trade-offs and synergies associated with sugarcane straw harvest for bioenergy production in Brazil.

Climate change amplifies gross nitrogen turnover in montane grasslands of Central Europe in both summer and winter seasons.

PubMed

Wang, Changhui; Chen, Zhe; Unteregelsbacher, Sebastian; Lu, Haiyan; Gschwendtner, Silvia; Gasche, Rainer; Kolar, Allison; Schloter, Michael; Kiese, Ralf; Butterbach-Bahl, Klaus; Dannenmann, Michael

2016-09-01

The carbon- and nitrogen-rich soils of montane grasslands are exposed to above-average warming and to altered precipitation patterns as a result of global change. To investigate the consequences of climatic change for soil nitrogen turnover, we translocated intact plant-soil mesocosms along an elevational gradient, resulting in an increase of the mean annual temperature by approx. 2 °C while decreasing precipitation from approx. 1500 to 1000 mm. Following three years of equilibration, we monitored the dynamics of gross nitrogen turnover and ammonia-oxidizing bacteria (AOB) and archaea (AOA) in soils over an entire year. Gross nitrogen turnover and gene levels of AOB and AOA showed pronounced seasonal dynamics. Both summer and winter periods equally contributed to cumulative annual N turnover. However, highest gross N turnover and abundance of ammonia oxidizers were observed in frozen soil of the climate change site, likely due to physical liberation of organic substrates and their rapid turnover in the unfrozen soil water film. This effect was not observed at the control site, where soil freezing did not occur due to a significant insulating snowpack. Climate change conditions accelerated gross nitrogen mineralization by 250% on average. Increased N mineralization significantly stimulated gross nitrification by AOB rather than by AOA. However, climate change impacts were restricted to the 2-6 cm topsoil and rarely occurred at 12-16 cm depth, where generally much lower N turnover was observed. Our study shows that significant mineralization pulses occur under changing climate, which is likely to result in soil organic matter losses with their associated negative impacts on key soil functions. We also show that N cycling processes in frozen soil can be hot moments for N turnover and thus are of paramount importance for understanding seasonal patterns, annual sum of N turnover and possible climate change feedbacks. © 2016 John Wiley & Sons Ltd.

Micromorphological characteristics of sandy forest soils recently impacted by wildfires in Russia

NASA Astrophysics Data System (ADS)

Maksimova, Ekaterina; Abakumov, Evgeny

2017-04-01

Two fire-affected soils were studied using micromorphological methods. The objective of the paper is to assess and compare fire effects on the micropedological organisation of soils in a forest-steppe zone of central Russia (Volga Basin, Togliatti city). Samples were collected in the green zone of Togliatti city. The results showed that both soils were rich in quartz and feldspar. Mica was highly present in soils affected by surface fires, while calcium carbonates were identified in the soils affected by crown fires. The type of plasma is humus-clay, but the soil assemblage is plasma-silt with a prevalence of silt. Angular and subangular grains are the most dominant soil particulates. No evidence of intensive weathering was detected. There was a decrease in the porosity of soils affected by fires as a consequence of soil pores filled with ash and charcoal.

Soil Diversity as Affected by Land Use in China: Consequences for Soil Protection

PubMed Central

Shangguan, Wei; Gong, Peng; Liang, Lu; Dai, YongJiu; Zhang, Keli

2014-01-01

Rapid land-use change in recent decades in China and its impact on terrestrial biodiversity have been widely studied, particularly at local and regional scales. However, the effect of land-use change on the diversity of soils that support the terrestrial biological system has rarely been studied. Here, we report the first effort to assess the impact of land-use change on soil diversity for the entire nation of China. Soil diversity and land-use effects were analyzed spatially in grids and provinces. The land-use effects on different soils were uneven. Anthropogenic soils occupied approximately 12% of the total soil area, which had already replaced the original natural soils. About 7.5% of the natural soil classes in China were in danger of substantial loss, due to the disturbance of agriculture and construction. More than 80% of the endangered soils were unprotected due to the overlook of soil diversity. The protection of soil diversity should be integrated into future conservation activities. PMID:25250394

Health Consequences of the Interaction of Our Genome with Our Environment

EPA Science Inventory

Health Consequences Of The Interaction Of Our Genome With Our Environment DM DeMarini, US EPA, RTP, NC 27711 Our primary exposures to potentially mutagenic agents are via the air, water, soil, combustion emissions, and food. Thus, characterizing the mutations induced by these...

Ecohydrological consequences of grasses invading shrublands: A comparison of cold and warm deserts

USDA-ARS?s Scientific Manuscript database

Exotic grasses are altering native savannas and woodlands across the globe. We summarize the current state of knowledge concerning the ecohydrological consequences of native-shrubland-to-grassland conversion. Our objectives are to understand ecohydrological changes at the local scale, such as soil-...

Connections Between Soil Fertility Declines, Land Use, Ethnicity, Education, and Wealth In Uganda

NASA Astrophysics Data System (ADS)

Tiemann, L. K.; Hartter, J.; Grandy, S.

2016-12-01

Food security issues are particularly acute in Uganda, where the world's 8th highest population growth rate will lead to cultivation of all land available for agriculture by 2022. Agricultural intensification in Uganda, which includes continuous cropping, mono-cropping and expansion of agriculture into marginal areas, has put unprecedented pressure on soils. In western Uganda, we surveyed 474 households, collecting demographic data, information on land use practices and perceptions of risk to crop yields and food security. We also sampled soils from maize fields associated with each surveyed household and measured total organic C and nutrients such as nitrogen (N) and phosphorus (P). Using these data, we sought to determine how risk perceptions, ethnicity, household wealth and education combine to determine land use decisions and ultimately, declines in soil organic matter and soil nutrients. We conducted our study within 5 km of an un-cultivated native tropical forest reserve, Kibale National Park (KNP), which serves as a reference point for potential soil fertility. Of 470 respondents, only 29 answered `no' when asked if they noticed year to year declines in crop yields. Across all maize fields we found soil C has been reduced by 30% and soil N by 45% relative to KNP soils and declines were more pronounced when survey respondents were Bakiga rather than Batooro. Households that indicated they were "very much" dependent upon profits from maize had a 31% increase in soil C:N while those indicating no dependence on maize profits had a significantly lower increase in soil C:N of 21%. Ethnicity and education influenced land use decisions; the Batooro and people with a lower level of education were more likely to burn their fields or crop residues. Additionally, the Bakiga were more likely to use rock P in their fields and in consequence had 108% while Batooro soils had 65% of the P found in KNP soils. Across all respondents, the top two ranked risks to crop yields and food security were weather related, with soil fertility ranked third on average, regardless of ethnicity, education or wealth. While crop yields are being noticeably affected by declining soil organic matter and soil nutrients, in particular soil N, people in this region continue to be worried more about changing weather patterns than soil fertility.

Influence of calcium carbonate and charcoal application on aggregation processes and organic matter retention at the silt-size scale

NASA Astrophysics Data System (ADS)

Asefaw Berhe, Asmeret; Kaiser, Michael; Ghezzehei, Teamrat; Myrold, David; Kleber, Markus

2013-04-01

The effectiveness of charcoal and calcium carbonate applications to improve soil conditions has been well documented. However, their influence on the formation of silt-sized aggregates and the amount and protection of associated organic matter (OM) against microbial decomposition is still largely unknown. For sustainable management of agricultural soils, silt-sized aggregates (2-53 µm) are of particularly large importance because they store up to 60% of soil organic carbon with mean residence times between 70 and 400 years. The objectives are i) to analyze the ability of CaCO3 and/or charcoal application to increase the amount of silt-sized aggregates and associated OM, ii) vary soil mineral conditions to establish relevant boundary conditions for amendment-induced aggregation processes, iii) to determine how amendment-induced changes in formation of silt-sized aggregates relate to microbial decomposition of OM. We set up artificial high reactive (HR, clay: 40%, sand: 57%, OM: 3%) and low reactive soils (LR, clay: 10%, sand: 89%, OM: 1%) and mixed them with charcoal (CC, 1%) and/or calcium carbonate (Ca, 0.2%). The samples were adjusted to a water potential of 0.3 bar and sub samples were incubated with microbial inoculum (MO). After a 16-weeks aggregation experiment, size fractions were separated by wet-sieving and sedimentation. Since we did not use mineral compounds in the artificial mixtures within the size range of 2 to 53 µm, we consider material recovered in this fraction as silt-sized aggregates, which was confirmed by SEM analyses. For the LR mixtures, we detected increasing N concentrations within the 2-53 µm fractions of the charcoal amended samples (CC, CC+Ca, and CC+Ca+MO) as compared to the Control sample with the strongest effect for the CC+Ca+MO sample. This indicates an association of N-containing microbial derived OM with silt-sized aggregates. For the charcoal amended LR and HR mixtures, the C concentrations of the 2-53 µm fractions are larger than those of the respective fractions of the Control samples but the effect is several times stronger for the LR mixtures. The C concentrations of the 2-53 µm fractions relative to the total C amount of the LR and HR mixtures are between 30 and 50%. The charcoal amended samples show generally larger relative C amounts associated with the 2-53 µm fractions than the Control samples. Benefits for aggregate formation and OM storage were larger for sand (LR) than for clay soil (HR). The gained data are similar to respective data for natural soils. Consequently, the suggested microcosm experiments are suitable to analyze mechanisms within soil aggregation processes.

Application of TAM III to study sensitivity of soil organic matter degradation to temperature

NASA Astrophysics Data System (ADS)

Vikegard, Peter; Barros, Nieves; Piñeiro, Verónica

2014-05-01

Traditionally, studies of soil biodegradation are based on CO2 dissipation rates. CO2 is a product of aerobic degradation of labile organic substrates like carbohydrates. That limits the biodegradation concept to just one of the soil organic matter fractions. This feature is responsible for some problems to settle the concept of soil organic matter (SOM) recalcitrance and for controversial results defining sensitivity of SOM to temperature. SOM consists of highly complex macromolecules constituted by fractions with different chemical nature and redox state affecting the chemical nature of biodegradation processes. Biodegradation of fractions more reduced than carbohydrates take place through metabolic pathways that dissipate less CO2 than carbohydrate respiration, that may not dissipate CO2, or that even may uptake CO2. These compounds can be considered more recalcitrant and with lower turnover times than labile SOM just because they are degraded at lower CO2 rates that may be just a consequence of the metabolic path. Nevertheless, decomposition of every kind of organic substrate always releases heat. For this reason, the measurement of the heat rate by calorimetry yields a more realistic measurement of the biodegradation of the SOM continuum. TAM III is one of the most recent calorimeters designed for directly measuring in real time the heat rate associated with any degradation process. It is designed as a multichannel system allowing the concomitant measurement of to up 24 samples at isothermal conditions or through a temperature scanning mode from 18 to 100ºC, allowing the continous measure of any sample at controlled non-isothermal conditions. The temperature scanning mode was tested in several soil samples collected at different depths to study their sensitivity to temperature changes from 18 to 35 ºC calculating the Q10 and the activation energy (EA) by the Arrhenius equation. It was attempted to associate the obtained EA values with the soil thermal properties determined by differential scanning calorimetry and thermogravimetric analysis. The EA values obtained ranged from -30 to -48 kJ/mol increasing with soil depth and with higher heat of combustion values of the samples obtained by DSC, suggesting that increased SOM recalcitrance involves higher investment of energy by the microbial population to degrade SOM. The calorimetrically determined Q10 values were observed to decrease with soil depth and higher heat of combustión, supporting the hypothesis, as given by different authors, that higher SOM recalcitrance can be associated with a decreased sensitivity to temperature as in agreement with the increasing trend of the activation energy

Long-term effects of sulfidized silver nanoparticles in sewage sludge on soil microflora.

PubMed

Kraas, Marco; Schlich, Karsten; Knopf, Burkhard; Wege, Franziska; Kägi, Ralf; Terytze, Konstantin; Hund-Rinke, Kerstin

2017-12-01

The use of silver nanoparticles (AgNPs) in consumer products such as textiles leads to their discharge into wastewater and consequently to a transfer of the AgNPs to soil ecosystems via biosolids used as fertilizer. In urban wastewater systems (e.g., sewer, wastewater treatment plant [WWTP], anaerobic digesters) AgNPs are efficiently converted into sparingly soluble silver sulfides (Ag 2 S), mitigating the toxicity of the AgNPs. However, long-term studies on the bioavailability and effects of sulfidized AgNPs on soil microorganisms are lacking. Thus we investigated the bioavailability and long-term effects of AgNPs (spiked in a laboratory WWTP) on soil microorganisms. Before mixing the biosolids into soil, the sludges were either anaerobically digested or directly dewatered. The effects on the ammonium oxidation process were investigated over 140 d. Transmission electron microscopy (TEM) suggested an almost complete sulfidation of the AgNPs analyzed in all biosolid samples and in soil, with Ag 2 S predominantly detected in long-term incubation experiments. However, despite the sulfidation of the AgNPs, soil ammonium oxidation was significantly inhibited, and the degree of inhibition was independent of the sludge treatment. The results revealed that AgNPs sulfidized under environmentally relevant conditions were still bioavailable to soil microorganisms. Consequently, Ag 2 S may exhibit toxic effects over the long term rather than the short term. Environ Toxicol Chem 2017;36:3305-3313. © 2017 The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals, Inc. on behalf of SETAC. © 2017 The Authors. Environmental Toxicology and Chemistry Published by Wiley Periodicals, Inc. on behalf of SETAC.

Predatory beetles facilitate plant growth by driving earthworms to lower soil layers.

PubMed

Zhao, Chuan; Griffin, John N; Wu, Xinwei; Sun, Shucun

2013-07-01

Theory suggests that predators of soil-improving, plant-facilitating detritivores (e.g. earthworms) should suppress plant growth via a negative tri-trophic cascade, but the empirical evidence is still largely lacking. We tested this prediction in an alpine meadow on the Tibetan Plateau by manipulating predatory beetles (presence/absence) and quantifying (i) direct effects on the density and behaviour of earthworms; and (ii) indirect effects on soil properties and above-ground plant biomass. In the absence of predators, earthworms improved soil properties, but did not significantly affect plant biomass. Surprisingly, the presence of predators strengthened the positive effect of earthworms on soil properties leading to the emergence of a positive indirect effect of predators on plant biomass. We attribute this counterintuitive result to: (i) the inability of predators to suppress overall earthworm density; and (ii) the predator-induced earthworm habitat shift from the upper to lower soil layer that enhanced their soil-modifying, plant-facilitating, effects. Our results reveal that plant-level consequences of predators as transmitted through detritivores can hinge on behaviour-mediated indirect interactions that have the potential to overturn predictions based solely on trophic interactions. This work calls for a closer examination of the effects of predators in detritus food webs and the development of spatially explicit theory capable of predicting the occurrence and consequences of predator-induced detritivore behavioural shifts. © 2013 The Authors. Journal of Animal Ecology © 2013 British Ecological Society.

Quantitative-spatial assessment of soil contamination in S. Francisco de Assis due to mining activity of the Panasqueira mine (Portugal).

PubMed

Ferreira da Silva, Eduardo; Freire Ávila, Paula; Salgueiro, Ana Rita; Candeias, Carla; Garcia Pereira, Henrique

2013-11-01

Through the years, mining and beneficiation processes produces large amounts of As-rich mine wastes laid up in huge tailings and open-air impoundments (Barroca Grande and Rio tailings) that are the main source of pollution in the surrounding area once they are exposed to the weathering conditions leading to the formation of AMD and consequently to the contamination of the surrounding environments, in particularly soils. In order to investigate the environmental contamination impact on S. Francisco de Assis (village located between the two major impoundments and tailings) agricultural soils, a geochemical survey was undertaken to assess toxic metals associations, related levels and their spatial distribution, and to identify the possible contamination sources. According to the calculated contamination factor, As and Zn have a very high contamination factor giving rise to 65.4% of samples with a moderate to high pollution degree; 34.6% have been classified as nil to very low pollution degree. The contamination factor spatial distribution put in evidence the fact that As, Cd, Cu, Pb, and Zn soils contents, downstream Barroca Grande tailing, are increased when compared with the local Bk soils. The mechanical dispersion, due to erosion, is the main contamination source. The chemical extraction demonstrates that the trace metals distribution and accumulation in S. Francisco de Assis soils is related to sulfides, but also to amorphous or poorly crystalline iron oxide phases. The partitioning study allowed understanding the local chemical elements mobility and precipitation processes, giving rise to the contamination dispersion model of the study area. The wind and hydrological factors are responsible for the chemical elements transport mechanisms, the water being the main transporter medium and soils as one of the possible retention media.

Managing soil microbial communities in grain production systems through cropping practices

NASA Astrophysics Data System (ADS)

Gupta, Vadakattu

2013-04-01

Cropping practices can significantly influence the composition and activity of soil microbial communities with consequences to plant growth and production. Plant type can affect functional capacity of different groups of biota in the soil surrounding their roots, rhizosphere, influencing plant nutrition, beneficial symbioses, pests and diseases and overall plant health and crop production. The interaction between different players in the rhizosphere is due to the plethora of carbon and nutritional compounds, root-specific chemical signals and growth regulators that originate from the plant and are modulated by the physico-chemical properties of soils. A number of plant and environmental factors and management practices can influence the quantity and quality of rhizodeposition and in turn affect the composition of rhizosphere biota communities, microbe-fauna interactions and biological processes. Some of the examples of rhizosphere interactions that are currently considered important are: proliferation of plant and variety specific genera or groups of microbiota, induction of genes involved in symbiosis and virulence, promoter activity in biocontrol agents and genes correlated with root adhesion and border cell quality and quantity. The observation of variety-based differences in rhizodeposition and associated changes in rhizosphere microbial diversity and function suggests the possibility for the development of varieties with specific root-microbe interactions targeted for soil type and environment i.e. designer rhizospheres. Spatial location of microorganisms in the heterogeneous field soil matrix can have significant impacts on biological processes. Therefore, for rhizosphere research to be effective in variable seasonal climate and soil conditions, it must be evaluated in the field and within a farming systems context. With the current focus on security of food to feed the growing global populations through sustainable agricultural production systems there is a need to develop innovative cropping systems that are both economically and environmentally sustainable.

Effect of Soil Slope on the Appearance of Mycobacterium avium subsp. paratuberculosis in Water Running off Grassland Soil after Application of Contaminated Slurry

PubMed Central

Alfaro, M.; Salazar, F.; Troncoso, E.; Mitchell, R. M.; Ramirez, L.; Naguil, A.; Zamorano, P.; Collins, M. T.

2013-01-01

The study assessed the effect of soil slope on Mycobacterium avium subsp. paratuberculosis transport into rainwater runoff from agricultural soil after application of M. avium subsp. paratuberculosis-contaminated slurry. Under field conditions, 24 plots of undisturbed loamy soil 1 by 2 m2 were placed on platforms. Twelve plots were used for water runoff: 6 plots at a 3% slope and 6 plots at a 15% slope. Half of the plots of each slope were treated with M. avium subsp. paratuberculosis-contaminated slurry, and half were not treated. Using the same experimental design, 12 plots were established for soil sampling on a monthly basis using the same spiked slurry application and soil slopes. Runoff following natural rainfall was collected and analyzed for M. avium subsp. paratuberculosis, coliforms, and turbidity. M. avium subsp. paratuberculosis was detected in runoff from all plots treated with contaminated slurry and one control plot. A higher slope (15%) increased the likelihood of M. avium subsp. paratuberculosis detection but did not affect the likelihood of finding coliforms. Daily rainfall increased the likelihood that runoff would have coliforms and the coliform concentration, but it decreased the M. avium subsp. paratuberculosis concentration in the runoff. When there was no runoff, rain was associated with increased M. avium subsp. paratuberculosis concentrations. Coliform counts in runoff were related to runoff turbidity. M. avium subsp. paratuberculosis presence/absence, however, was related to turbidity. Study duration decreased bacterial detection and concentration. These findings demonstrate the high likelihood that M. avium subsp. paratuberculosis in slurry spread on pastures will contaminate water runoff, particularly during seasons with high rainfall. M. avium subsp. paratuberculosis contamination of water has potential consequences for both animal and human health. PMID:23542616

Fertilizer usage and cadmium in soils, crops and food.

PubMed

Dharma-Wardana, M W C

2018-06-23

Phosphate fertilizers were first implicated by Schroeder and Balassa (Science 140(3568):819-820, 1963) for increasing the Cd concentration in cultivated soils and crops. This suggestion has become a part of the accepted paradigm on soil toxicity. Consequently, stringent fertilizer control programs to monitor Cd have been launched. Attempts to link Cd toxicity and fertilizers to chronic diseases, sometimes with good evidence, but mostly on less certain data are frequent. A re-assessment of this "accepted" paradigm is timely, given the larger body of data available today. The data show that both the input and output of Cd per hectare from fertilizers are negligibly small compared to the total amount of Cd/hectare usually present in the soil itself. Calculations based on current agricultural practices are used to show that it will take centuries to double the ambient soil Cd level, even after neglecting leaching and other removal effects. The concern of long-term agriculture should be the depletion of available phosphate fertilizers, rather than the negligible contamination of the soil by trace metals from fertilizer inputs. This conclusion is confirmed by showing that the claimed correlations between fertilizer input and Cd accumulation in crops are not robust. Alternative scenarios that explain the data are presented. Thus, soil acidulation on fertilizer loading and the effect of Mg, Zn and F ions contained in fertilizers are considered using recent [Formula: see text], [Formula: see text] and [Formula: see text] ion-association theories. The protective role of ions like Zn, Se, Fe is emphasized, and the question of Cd toxicity in the presence of other ions is considered. These help to clarify difficulties in the standard point of view. This analysis does not modify the accepted views on Cd contamination by airborne delivery, smoking, and industrial activity, or algal blooms caused by phosphates.

Winter Insulation By Snow Accumulation in a Subarctic Treeline Ecosystem Increases Summer Carbon Cycling Rates

NASA Astrophysics Data System (ADS)

Parker, T.; Subke, J. A.; Wookey, P. A.

2014-12-01

The effect of snow accumulation on soil carbon and nutrient cycling is attracting substantial attention from researchers. We know that deeper snow accumulation caused by high stature vegetation increases winter microbial activity and therefore carbon and nitrogen flux rates. However, until now the effect of snow accumulation, by buffering winter soil temperature, on subsequent summer soil processes, has scarcely been considered. We carried out an experiment at an alpine treeline in subarctic Sweden in which soil monoliths, contained within PVC collars, were transplanted between forest (deep winter snow) and tundra heath (shallow winter snow). We measured soil CO2efflux over two growing seasons and quantified soil microbial biomass after the second winter. We showed that respiration rates of transplanted forest soil were significantly reduced compared with control collars (remaining in the forest) as a consequence of colder, but more variable, winter temperatures. We hypothesised that microbial biomass would be reduced in transplanted forests soils but found there was no difference compared to control. We therefore further hypothesised that the similarly sized microbial pool in the control is assembled differently to the transplant. We believe that the warmer winters in forests foster more active consortia of decomposer microbes as a result of different abiotic selection pressures. Using an ecosystem scale experimental approach, we have identified a mechanism that influences summer carbon cycling rates based solely on the amount of snow that accumulates the previous winter. We conclude that modification of snow depth as a consequence of changes in vegetation structure is an important mechanism influencing soil C stocks in ecosystems where snow persists for a major fraction of the year.

Plant Diversity Surpasses Plant Functional Groups and Plant Productivity as Driver of Soil Biota in the Long Term

PubMed Central

Eisenhauer, Nico; Milcu, Alexandru; Sabais, Alexander C. W.; Bessler, Holger; Brenner, Johanna; Engels, Christof; Klarner, Bernhard; Maraun, Mark; Partsch, Stephan; Roscher, Christiane; Schonert, Felix; Temperton, Vicky M.; Thomisch, Karolin; Weigelt, Alexandra; Weisser, Wolfgang W.; Scheu, Stefan

2011-01-01

Background One of the most significant consequences of contemporary global change is the rapid decline of biodiversity in many ecosystems. Knowledge of the consequences of biodiversity loss in terrestrial ecosystems is largely restricted to single ecosystem functions. Impacts of key plant functional groups on soil biota are considered to be more important than those of plant diversity; however, current knowledge mainly relies on short-term experiments. Methodology/Principal Findings We studied changes in the impacts of plant diversity and presence of key functional groups on soil biota by investigating the performance of soil microorganisms and soil fauna two, four and six years after the establishment of model grasslands. The results indicate that temporal changes of plant community effects depend on the trophic affiliation of soil animals: plant diversity effects on decomposers only occurred after six years, changed little in herbivores, but occurred in predators after two years. The results suggest that plant diversity, in terms of species and functional group richness, is the most important plant community property affecting soil biota, exceeding the relevance of plant above- and belowground productivity and the presence of key plant functional groups, i.e. grasses and legumes, with the relevance of the latter decreasing in time. Conclusions/Significance Plant diversity effects on biota are not only due to the presence of key plant functional groups or plant productivity highlighting the importance of diverse and high-quality plant derived resources, and supporting the validity of the singular hypothesis for soil biota. Our results demonstrate that in the long term plant diversity essentially drives the performance of soil biota questioning the paradigm that belowground communities are not affected by plant diversity and reinforcing the importance of biodiversity for ecosystem functioning. PMID:21249208

Soil surface disturbances in cold deserts: Effects on nitrogenase activity in cyanobacterial-lichen soil crusts

USGS Publications Warehouse

Belnap, Jayne

1996-01-01

CyanobacteriaMichen soil crusts can be a dominant source of nitrogen for cold-desert ecosystems. Effects of surface disturbance from footprints, bike and vehicle tracks on the nitrogenase activity in these crusts was investigated. Surface disturbances reduced nitrogenase activity by 30-100%. Crusts dominated by the cyanobacterium Microcoleus vaginatus on sandy soils were the most susceptible to disruption; crusts on gypsiferous soils were the least susceptible. Crusts where the soil lichen Collema tenax was present showed less immediate effects; however, nitrogenase activity still declined over time. Levels of nitrogenase activity reduction were affected by the degree of soil disruption and whether sites were dominated by cyanobacteria with or without heterocysts. Consequently, anthropogenic surface disturbances may have serious implications for nitrogen budgets in these ecosystems.

Tracking microbial colonization patterns associated with micro-environments of rice

NASA Astrophysics Data System (ADS)

Schmidt, Hannes; Eickhorst, Thilo

2015-04-01

The interface between soil and roots (i.e. the rhizosphere) represents a highly dynamic micro-environment for microbial populations. Root-derived compounds are released into the rhizosphere and may attract, stimulate, or inhibit native soil microorganisms. Microbes associated with the rhizosphere, in turn, may have deleterious, neutral, or promoting effects on the plant. Such influences of microbial populations on the plant and vice versa are likely to be greatest in close vicinity to the root surface. It is therefore essential to detect and visualize preferential micro-sites of microbial root colonization to identify potential areas of microbe-plant interaction. We present a single-cell based approach allowing for the localization, quantification, and visualization of native microbial populations in the rhizosphere and on the rhizoplane of soil-grown roots in situ. Catalyzed reporter deposition fluorescence in situ hybridization (CARD-FISH) in combination with confocal laser scanning microscopy was applied to observe colonization densities and patterns of microbial populations associated with wetland rice. Hybridizations with domain- and phylum-specific oligonucleotide probes showed that the growth stage of the rice plant as well as the distance to the root surface had a strong influence on microbial colonization patterns. Three-dimensional visualizations of root-associated microbes revealed micro-sites of preferential colonization. Highest cell numbers of archaea and bacteria were found at flowering stage of rice plant development. Irregular distribution patterns of microbiota observed at early growth stages shifted towards more uniform colonization with plant age. Accordingly, the highest colonization densities shifted from the tip to more mature regions of rice roots. Methanogenic archaea and methanotrophic bacteria were found to be co-localized at basal regions of lateral roots. Beneficial effects of a close association with root surfaces were indicated by proportionally higher numbers of methane-oxidizing bacteria on the rhizoplane compared to the rhizosphere. Such spatial effects could not be observed for methanogenic archaea. As a consequence, the detection and visualization of microbial colonization patterns on a micro-scale via CARD-FISH represents an instrumental approach in revealing potential sites of interaction between microbes and plants in soil micro-environments.

Glucosinolate-derived compounds as a green manure for controlling Escherichia coli O157:H7 and Salmonella in soil

USDA-ARS?s Scientific Manuscript database

Plants from the Brassica family contain glucosinolate-derived compounds (GDC) which may act as natural antimicrobials in soil. Consequently, Brassica cover crops planted after harvest of the primary crop in the fall, and/or ntercropped during the growing season, could provide benefits derived from...

Divergent biogeography of native and introduced soil macroinvertebrates in North America north of Mexico

Treesearch

Erik A. Lilleskov; William J. Mattson; Andrew J. Storer

2008-01-01

To improve understanding of the biogeographical consequences of species introduction, we examined whether introduced soil macroinvertebrates differ from natives in the relationship between species richness and key environmental predictors, and whether such differences affect the relationship between native and introduced species richness. For North America north of...

Canopy gaps decrease microbial densities and disease risk for a shade-intolerant tree species

Treesearch

Kurt O. Reinhart; Alejandro A. Royo; Stacie A. Kageyama; Keith. Clay

2010-01-01

Canopy disturbances such as windthrowevents have obvious impacts on forest structure and composition aboveground, but changes in soil microbial communities and the consequences of these changes are less understood.We characterized the densities of a soil-borne pathogenic oomycete (Pythium) and a common saprotrophic zygomycete (Mortierella...

Remediation/restoration of degraded soil in the Central Great plains

USDA-ARS?s Scientific Manuscript database

Soil degradation became a problem in the arid region in the late 18th and early 19th century, as a consequence of agriculture expansion and conversion of native land to cropland. The objectives of this study are to evaluate the impact of different tillage practices, nitrogen (N) sources, and N rates...

Soil carbon content and CO2 flux along a hydrologic gradient in a High-Arctic tundra lake basin, Northwest Greenland

NASA Astrophysics Data System (ADS)

McKnight, J.; Klein, E. S.; Welker, J. M.; Schaeffer, S. M.; Franklin, M.

2015-12-01

High Arctic landscapes are composed of watershed basins that vary in size and ecohydrology, but typically have a plant community complex that ranges from dry tundra to moist tundra to wet sedge systems along water body shorelines. The spatial extent of these plant communities reflects mean annual soil moisture and temperature, and is vulnerable to changes in climate conditions. Soil moisture and temperature significantly influence organic matter microbial activity and decomposition, and can affect the fate of soil carbon in tundra soils. Consequently, due to the unique soil carbon differences between tundra plant communities, shifts in their spatial extent may drive future High Arctic biosphere-atmosphere interactions. Understanding this terrestrial-atmosphere trace gas feedback, however, requires quantification of the rates and patterns of CO2 exchange along soil moisture gradients and the associated soil properties. In summer of 2015, soil CO2 flux rate, soil moisture and temperature were measured along a soil moisture gradient spanning three vegetation zones (dry tundra, wet tundra, and wet grassland) in a snow melt-fed lake basin near Thule Greenland. Mean soil temperature during the 2015 growing season was greater in dry tundra than in wet tundra and wet grassland (13.0 ± 1.2, 7.8 ± 0.8, and 5.5 ± 0.9°C, respectively). Mean volumetric soil moisture differed among all three vegetation zones where the soil moisture gradient ranged from 9 % (dry tundra) to 34 % (wet tundra) to 51 % (wet grassland). Mean soil CO2 flux was significantly greater in the wet grassland (1.7 ± 0.1 μmol m-2 s-1) compared to wet tundra (0.9 ± 0.2 μmol m-2 s-1) and dry tundra (1.2 ± 0.2 μmol m-2 s-1). Soil CO2 flux increased and decreased with seasonal warming and cooling of soil temperature. Although soil temperature was an important seasonal driver of soil CO2 flux rates, differences in mean seasonal soil CO2 flux rates among vegetation zones appeared to be a function of the combined effects of soil temperature and soil moisture conditions. These results suggest that the response of vegetation distribution to shifts in precipitation and warmer climate conditions may have significant implications for release of soil carbon as CO2 in High Arctic tundra ecosystems in Northwest Greenland.

Contrasting soil microbial community functional structures in two major landscapes of the Tibetan alpine meadow

DOE PAGES

Chu, Houjuan; Wang, Shiping; Yue, Haowei; ...

2014-07-07

The grassland and shrubland are two major landscapes of the Tibetan alpine meadow, a region very sensitive to the impact of global warming and anthropogenic perturbation. Herein, we report a study showing that a majority of differences in soil microbial community functional structures, measured by a functional gene array named GeoChip 4.0, in two adjacent shrubland and grassland areas, were explainable by environmental properties, suggesting that the harsh environments in the alpine grassland rendered niche adaptation important. Furthermore, genes involved in labile carbon degradation were more abundant in the shrubland than those of the grassland but genes involved in recalcitrantmore » carbon degradation were less abundant, which was conducive to long-term carbon storage and sequestration in the shrubland despite low soil organic carbon content. In addition, genes of anerobic nitrogen cycling processes such as denitrification and dissimilatory nitrogen reduction were more abundant, shifting soil nitrogen cycling toward ammonium biosynthesis and consequently leading to higher soil ammonium contents. In conclusion, we also noted higher abundances of stress genes responsive to nitrogen limitation and oxygen limitation, which might be attributed to low total nitrogen and higher water contents in the shrubland. Together, these results provide mechanistic knowledge about microbial linkages to soil carbon and nitrogen storage and potential consequences of vegetation shifts in the Tibetan alpine meadow.« less

Balancing water scarcity and quality for sustainable irrigated agriculture

NASA Astrophysics Data System (ADS)

Assouline, Shmuel; Russo, David; Silber, Avner; Or, Dani

2015-05-01

The challenge of meeting the projected doubling of global demand for food by 2050 is monumental. It is further exacerbated by the limited prospects for land expansion and rapidly dwindling water resources. A promising strategy for increasing crop yields per unit land requires the expansion of irrigated agriculture and the harnessing of water sources previously considered "marginal" (saline, treated effluent, and desalinated water). Such an expansion, however, must carefully consider potential long-term risks on soil hydroecological functioning. The study provides critical analyses of use of marginal water and management approaches to map out potential risks. Long-term application of treated effluent (TE) for irrigation has shown adverse impacts on soil transport properties, and introduces certain health risks due to the persistent exposure of soil biota to anthropogenic compounds (e.g., promoting antibiotic resistance). The availability of desalinated water (DS) for irrigation expands management options and improves yields while reducing irrigation amounts and salt loading into the soil. Quantitative models are used to delineate trends associated with long-term use of TE and DS considering agricultural, hydrological, and environmental aspects. The primary challenges to the sustainability of agroecosystems lies with the hazards of saline and sodic conditions, and the unintended consequences on soil hydroecological functioning. Multidisciplinary approaches that combine new scientific knowhow with legislative, economic, and societal tools are required to ensure safe and sustainable use of water resources of different qualities. The new scientific knowhow should provide quantitative models for integrating key biophysical processes with ecological interactions at appropriate spatial and temporal scales.

Risk and resilience in the shale gas context: a nexus perspective

NASA Astrophysics Data System (ADS)

Rosales, T. Y.; Notte, C. A.; Allen, D. M.; Kirste, D. M.

2014-12-01

The accelerated exploration for and development of unconventional gas plays around the world has raised public concern about potential risks to human health and the environment. In this study, a risk assessment framework specific to shale gas development is proposed. The framework aims to quantify and/or qualify both risk and resilience within a water-energy nexus context, using a comprehensive approach that considers environment, health and policy. The risk assessment framework is intended to be flexible so that it can be used in different regions, but will be tested in North East British Columbia, Canada where shale gas development is rapidly expanding. The main components of risk include hazards, susceptibility and potential consequences, which will be evaluated in space and time using ArcGIS software. The hazards are associated with all phases of shale gas development and include: water, air, and soil contamination; water use (surface and groundwater), and land use disturbance, and their assessment will take into account where they may occur, their frequency, duration and magnitude. Hazard-specific susceptibility maps will be generated based on the physical characteristics of the environment (e.g. soil, geology, hydrology, topography) as well as water source information (e.g. well locations), community footprints, etc. When combined with an evaluation of potential consequences, the resulting set of spatial risk maps can then be used for water resource management, land use planning, and industry permitting. Resilience, which buffers risk, here considers the existing regulatory framework and whether or not existing regulations can mitigate risk by reducing the hazard potential or consequences. The study considers how regulations may fully, partially, or inadequately mitigate the consequences of a given hazard. If development is to continue at its current pace in North East BC, it is imperative that decision-makers recognize the changing risk and resilience profiles and respond with appropriate policy. A critical component of the study comprises a gap analysis of current regulation and a possible path forward.

Land abandonment, fire recurrence and soil carbon content in the Macizo del Caroig, Eastern Spain

NASA Astrophysics Data System (ADS)

Cerdá, A.; González Peñaloza, F.; Santín, C.; Doerr, S. H.

2012-04-01

During the last 50 years two main forces have driven the fate of Mediterranean landscapes: land abandonment and forest fires (MacDonald et al., 2000; Moreira et al., 2001). Due to the economical changes suffered by the of the Mediterranean countries after the Second World War, the population migrated from the rural to the urban areas, and from South to North Europe. The land abandonment allowed the vegetation to recover and, as a consequence, an increase in forest fire took place. The soils of the abandoned land recovered the vegetation and litter layers, and consequently changes in soil properties have being found. One of these changes is the increase of soil carbon content, which is due both to vegetation recovery and to fire occurrence that increases the ash and pyrogenic carbon content in soils. Twenty plots were selected in the Macizo del Caroig in Eastern Spain on soils developed on limestone. The period of abandonment and the forest fires that had affected each plot were determined by interviews with the owners, farmers and shepherds. In addition, six (three + three) plots were selected as forest (no plough) and cultivated control plots. Each plot was sampled (10 random samples) and the organic carbon content determined. The results show that the cultivated plots have organic matter contents of 1.02 %, and the forest (Quercus ilex sp.) plots reach the highest value: 14.98 %. Within those we found values that range from 2.34 %, in the recently abandoned plots (10 year abandonment), to values of 8.23 % in the 50 year old abandoned fields.The results demonstrate that there is a recovery of the organic carbon in abandoned soils and that the forest fires do no affect this trend. The increase of soil organic matter after abandonment is a result of the recovery of vegetation(Debussche et al., 2001), which is the consequence of the end of the disturbance of forest that have affected the Mediterranean for millennia (Barbero et al., 1990). The colonization of the abandoned fields by the vegetation is very efficient (Ne'eman and Izhaki, 1996) and fire adapted species are the main types, which demonstrates that fire is part of the Mediterranean ecosystems (Pausas, 1999). The fire was not found here as a factor increasing the organic carbon in the abandoned soils, although it was found in a nearby area (Novara et al., 2011). This research confirms that the soil development in Mediterranean Type-Ecosystems (Cerdà et al., 2010) is being affected by land abandonment and fire (Doerr and Cerdà, 2005).

Study of environmental biodegradation of LDPE films in soil using optical and scanning electron microscopy.

PubMed

Mumtaz, Tabassum; Khan, M R; Hassan, Mohd Ali

2010-07-01

An outdoor soil burial test was carried out to evaluate the degradation of commercially available LDPE carrier bags in natural soil for up to 2 years. Biodegradability of low density polyethylene films in soil was monitored using both optical and scanning electron microscopy (SEM). After 7-9 months of soil exposure, microbial colonization was evident on the film surface. Exposed LDPE samples exhibit progressive changes towards degradation after 17-22 months. SEM images reveal signs of degradation such as exfoliation and formation of cracks on film leading to disintegration. The possible degradation mode and consequences on the use and disposal of LDPE films is discussed. Copyright 2010 Elsevier Ltd. All rights reserved.

Extinction risk of soil biota

PubMed Central

Veresoglou, Stavros D.; Halley, John M.; Rillig, Matthias C.

2015-01-01

No species lives on earth forever. Knowing when and why species go extinct is crucial for a complete understanding of the consequences of anthropogenic activity, and its impact on ecosystem functioning. Even though soil biota play a key role in maintaining the functioning of ecosystems, the vast majority of existing studies focus on aboveground organisms. Many questions about the fate of belowground organisms remain open, so the combined effort of theorists and applied ecologists is needed in the ongoing development of soil extinction ecology. PMID:26593272

Moisture and temperature controls on nitrification differ among ammonia oxidizer communities from three alpine soil habitats

NASA Astrophysics Data System (ADS)

Osborne, Brooke B.; Baron, Jill S.; Wallenstein, Matthew D.

2016-03-01

Climate change is altering the timing and magnitude of biogeochemical fluxes in many highelevation ecosystems. The consequent changes in alpine nitrification rates have the potential to influence ecosystem scale responses. In order to better understand how changing temperature and moisture conditions may influence ammonia oxidizers and nitrification activity, we conducted laboratory incubations on soils collected in a Colorado watershed from three alpine habitats (glacial outwash, talus, and meadow). We found that bacteria, not archaea, dominated all ammonia oxidizer communities. Nitrification increased with moisture in all soils and under all temperature treatments. However, temperature was not correlated with nitrification rates in all soils. Site-specific temperature trends suggest the development of generalist ammonia oxidzer communities in soils with greater in situ temperature fluctuations and specialists in soils with more steady temperature regimes. Rapidly increasing temperatures and changing soil moisture conditions could explain recent observations of increased nitrate production in some alpine soils.

Retrospective dosimetry of Iodine-131 exposures using Iodine-129 and Caesium-137 inventories in soils--A critical evaluation of the consequences of the Chernobyl accident in parts of Northern Ukraine.

PubMed

Michel, R; Daraoui, A; Gorny, M; Jakob, D; Sachse, R; Romantschuk, L D; Alfimov, V; Synal, H-A

2015-12-01

The radiation exposure of thyroid glands due to (131)I as a consequence of the Chernobyl accident was investigated retrospectively based on (129)I and (137)Cs inventories in soils in Northern Ukraine. To this end, soil samples from 60 settlements were investigated for (129)I, (127)I, and (137)Cs by AMS, ICP-MS and gamma-spectrometry, respectively. Sampling was performed between 2004 und 2007. In those parts of Northern Ukraine investigated here the (129)I and (137)Cs inventories are well correlated, the variability of the individual (129)I/(137)Cs ratios being, however, high. Both the (129)I and (137)Cs inventories in the individual 5 samples for each settlement allowed estimating the uncertainties of the inventories due to the variability of the radionuclide deposition and consequently of the retrospective dosimetry. Thyroid equivalent doses were calculated from the (129)I and the (137)Cs inventories using aggregated dose coefficients for 5-year old and 10-year-old children as well as for adults. The highest thyroid equivalent doses (calculated from (129)I inventories) were calculated for Wladimirowka with 30 Gy for 5-years-old children and 7 Gy for adults. In 35 settlements of contamination zone II the geometric mean of the thyroid equivalent doses was 2.0 Gy for 5-years-old children with a geometric standard deviation (GSD) of 3.0. For adults the geometric mean was 0.47 Gy also with a GSD of 3.0. In more than 25 settlements of contamination zone III the geometric means were 0.82 Gy for 5-years old children with a GSD of 1.8 and 0.21 Gy for adults (GSD 1.8). For 45 settlements, the results of the retrospective dosimetry could be compared with thyroid equivalent doses calculated using time-integrated (131)I activities of thyroids which were measured in 1986. Thus, a critical evaluation of the results was possible which demonstrated the general feasibility of the method, but also the associated uncertainties and limitations. Copyright © 2015 Elsevier Ltd. All rights reserved.

Positive Reinforcement and Logical Consequences in the Treatment of Classroom Encopresis.

ERIC Educational Resources Information Center

Lyon, Mark A.

1984-01-01

A child with a diagnosis of mild mental retardation was treated for encopresis. Positive reinforcement procedures for continence and logical consequences for soiling were effective in accomplishing complete continence during the final phase of treatment. An ABCDA design with a decelerating rate of reinforcement was utilized to assess treatment…

Impacts of timber harvesting on soil organic matter, nitrogen, productivity, and health of inland northwest forests

Treesearch

M. F. Jurgensen; A. E. Harvey; R. T. Graham; D. S. Page-Dumroese; J. R. Tonn; M. J. Larsen; T. B. Jain

1997-01-01

Soil organic components are important factors in the health and productivity of Inland Northwest forests. Timber harvesting and extensive site preparation (piling, windrowing, or scalping) reduces the amount of surface organic material (woody residues and forest floor layers) over large areas. Some wildfires and severe prescribed burns can have similar consequences....

Restoring ecosystem resilience to urban forests using Dutch elm disease-tolerant American elm trees

Treesearch

Charles E. Flower; Cornelia C. Pinchot; James M. Slavicek

2017-01-01

Urban forests contribute significantly to human health and environmental quality (Sanesi et al. 2011). As such, maintaining healthy urban forests resilient to pollution (atmospheric and soil), high temperatures, compacted soils, and poor drainage is critical. However, these forests have been hard hit by development, pests, and pathogens, consequently reshaping their...

Soil enzyme activities during the 2011 Texas record drought/heat wave and implications to biogeochemical cycling and organic matter dynamics

USDA-ARS?s Scientific Manuscript database

Extreme weather events such as severe droughts and heat waves may have permanent consequences on soil quality and functioning in agroecosystems. The Southern High Plains (SHP) region of Texas, U.S., a large cotton producing area, experienced a historically extreme drought and heat wave during 2011,...

Harvest intensity and competition control impacts on loblolly pine fusiform rust incidence

Treesearch

Robert J. Eaton; Paula Spaine; Felipe G. Sanchez

2006-01-01

The Long Term Soil Productivity experiment tests the effects of soil compaction, surface organic matter removal, and understory control on net primary productivity. An unintended consequence of these treatments may be an effect on the incidence of fusiform rust [Cronartium quercuum (Berk.) Miy. ex Shirai f. sp. fusiforme Burdsall et Snow]. Loblolly pine (Pinus...

Protection of Nitrate-Reducing Fe(II)-Oxidizing Bacteria from UV Radiation by Biogenic Fe(III) Minerals

NASA Astrophysics Data System (ADS)

Gauger, Tina; Konhauser, Kurt; Kappler, Andreas

2016-04-01

Due to the lack of an ozone layer in the Archean, ultraviolet radiation (UVR) reached early Earth's surface almost unattenuated; as a consequence, a terrestrial biosphere in the form of biological soil crusts would have been highly susceptible to lethal doses of irradiation. However, a self-produced external screen in the form of nanoparticular Fe(III) minerals could have effectively protected those early microorganisms. In this study, we use viability studies by quantifying colony-forming units (CFUs), as well as Fe(II) oxidation and nitrate reduction rates, to show that encrustation in biogenic and abiogenic Fe(III) minerals can protect a common soil bacteria such as the nitrate-reducing Fe(II)-oxidizing microorganisms Acidovorax sp. strain BoFeN1 and strain 2AN from harmful UVC radiation. Analysis of DNA damage by quantifying cyclobutane pyrimidine dimers (CPD) confirmed the protecting effect by Fe(III) minerals. This study suggests that Fe(II)-oxidizing microorganisms, as would have grown in association with mafic and ultramafic soils/outcrops, would have been able to produce their own UV screen, enabling them to live in terrestrial habitats on early Earth.

Protection of Nitrate-Reducing Fe(II)-Oxidizing Bacteria from UV Radiation by Biogenic Fe(III) Minerals.

PubMed

Gauger, Tina; Konhauser, Kurt; Kappler, Andreas

2016-04-01

Due to the lack of an ozone layer in the Archean, ultraviolet radiation (UVR) reached early Earth's surface almost unattenuated; as a consequence, a terrestrial biosphere in the form of biological soil crusts would have been highly susceptible to lethal doses of irradiation. However, a self-produced external screen in the form of nanoparticular Fe(III) minerals could have effectively protected those early microorganisms. In this study, we use viability studies by quantifying colony-forming units (CFUs), as well as Fe(II) oxidation and nitrate reduction rates, to show that encrustation in biogenic and abiogenic Fe(III) minerals can protect a common soil bacteria such as the nitrate-reducing Fe(II)-oxidizing microorganisms Acidovorax sp. strain BoFeN1 and strain 2AN from harmful UVC radiation. Analysis of DNA damage by quantifying cyclobutane pyrimidine dimers (CPD) confirmed the protecting effect by Fe(III) minerals. This study suggests that Fe(II)-oxidizing microorganisms, as would have grown in association with mafic and ultramafic soils/outcrops, would have been able to produce their own UV screen, enabling them to live in terrestrial habitats on early Earth.

From solid to liquid: assessing the release of organic matter into soil solution in response to land-use conversion in Brazilian Oxisols

NASA Astrophysics Data System (ADS)

James, Jason; Gross, Cole; Dwivedi, Pranjal; Bernardi, Rodolpho; Guerrini, Irae; Harrison, Rob; Butman, David

2017-04-01

Recent advances in freshwater research indicate that roughly double the quantity of carbon is exported from soils to streams and rivers than was previously estimated, and that the age of carbon exported from major rivers globally increases with greater human disturbance in the watershed. This implies that human land-use can release old, previously mineral-associated C into solution with subsequent export to groundwater and ultimately freshwater systems where terrestrial organic matter is either mineralized to CO2, stored in aquatic sediments, or exported to the ocean. Consequently, it is important to understand the mechanisms that cause the release of SOM that is mineral-bound into solution in response to human disturbance and land-use change. Research methods have been established to examine both the fast turnover, dissolved pool of soil organic matter (SOM), as well as the slow turnover, mineral-associated pool. However, to better characterize the response of the total SOM pool to disturbance, it is necessary to understand the interactions between these functional pools by examining them both simultaneously. This study seeks to examine the interaction between dissolved organic matter (DOM) and bulk SOM throughout the soil profile in response to conversion of Brazilian Cerrado (savannah forest) to Eucalyptus plantation forest on the same soil type. The water-extractable organic matter was obtained from soil samples down to 150 cm, characterized using fluorescence and NMR spectroscopy, and carbon-dated. Simultaneously, bulk mineral soil samples were analyzed for microbial biomass, carbon content and age, and characterized using Fourier Transform Infrared Spectroscopy. SOM spectra were obtained by washing subsamples with sodium hypochlorite and subtracting the subsequent mineral matrix spectra from bulk soil spectra. Preliminary results show that microbial biomass decreases much more quickly with depth than DOM, suggesting that C released into solution from deeper horizons may be less likely to be intercepted, and thus preferentially leached to groundwater. Native Cerrado forests had substantially more roots compared to Eucalyptus, and also released substantially larger quantities of DOM from their O horizons. Processes operating at the interface between solid and liquid, terrestrial and aquatic are a key unknown in the global carbon cycle. This research permits a unique snapshot into the relationship between DOM and SOM and the response of these pools to land-use change in Brazil.

Mechanics of rainfall-induced flow failure in unsaturated shallow slopes (Invited)

NASA Astrophysics Data System (ADS)

Buscarnera, G.

2013-12-01

The increase in pore water pressure due to rain infiltration can be a dominant component in the activation of slope instabilities. This work shows an application of the theory of material stability to the triggering analysis of this important class of natural hazards. The goal is to identify the mechanisms through which the process of rain infiltration promotes instabilities of the flow-type in the soil covers. The interplay between increase in pore water pressure and failure mechanisms is investigated at material point level. To account for multiple failure mechanisms, the second-order energy input is linked to the controllability theory and used to define different types of stability indices, each associated with a specific mode of slope failure. It is shown that the theory can be used to assess both shear failure and static liquefaction in saturated and unsaturated soil covers. In particular, it is shown that these instability modes are regulated by the hydro-mechanical characteristics of the soil covers, as well as by their mutual coupling. This finding discloses the importance of the constitutive functions that simulate the interaction between the response of the solid skeleton and the fluid-retention characteristics of the soil. As a consequence, they suggest that even material properties that are not be to directly associated with the shearing resistance (e.g., the potential for wetting compaction) may play a role in the initiation of catastrophic slope failures. According to the proposed interpretation, the process of pore pressure increase can be seen as the trigger of uncontrolled strains, which can anticipate the onset of frictional failure and promote a solid-to-fluid transition.

The Effects of More Extreme Rainfall Patterns on Infiltration and Nutrient Losses in Agricultural Soils

NASA Astrophysics Data System (ADS)

Hess, L.; Basso, B.; Hinckley, E. L. S.; Robertson, G. P.; Matson, P. A.

2015-12-01

In the coming century, the proportion of total rainfall that falls in heavy storm events is expected to increase in many areas, especially in the US Midwest, a major agricultural region. These changes in rainfall patterns may have consequences for hydrologic flow and nutrient losses, especially in agricultural soils, with potentially negative consequences for receiving ground- and surface waters. We used a tracer experiment to examine how more extreme rainfall patterns may affect the movement of water and solutes through an agricultural soil profile in the upper Midwest, and to what extent tillage may moderate these effects. Two rainfall patterns were created with 5m x 5m rainout shelters at the Kellogg Biological Station LTER site in replicated plots with either conventional tillage or no-till management. Control rainfall treatments received water 3x per week, and extreme rainfall treatments received the same total amount of water but once every two weeks, to simulate less frequent but larger storms. In April 2015, potassium bromide (KBr) was added as a conservative tracer of water flow to all plots, and Br- concentrations in soil water at 1.2m depth were measured weekly from April through July. Soil water Br- concentrations increased and peaked more quickly under the extreme rainfall treatment, suggesting increased infiltration and solute transfer to depth compared to soils exposed to control rainfall patterns. Soil water Br- also increased and peaked more quickly in no-till than in conventional tillage treatments, indicating differences in flow paths between management systems. Soil moisture measured every 15 minutes at 10, 40, and 100cm depths corroborates tracer experiment results: rainfall events simulated in extreme rainfall treatments led to large increases in deep soil moisture, while the smaller rainfall events simulated under control conditions did not. Deep soil moisture in no-till treatments also increased sooner after water application as compared to in conventional soils. Our results suggest that exposure to more extreme rainfall patterns will likely increase infiltration depth and nutrient losses in agricultural soils. In particular, soils under no-till management, which leads to development of preferential flow paths, may be particularly vulnerable to vertical nutrient losses.

On Budyko curve as a consequence of climate-soil-vegetation equilibrium hypothesis

NASA Astrophysics Data System (ADS)

Pande, S.

2012-04-01

A hypothesis that Budyko curve is a consequence of stable equilibriums of climate-soil-vegetation co-evolution is tested at biome scale. We assume that i) distribution of vegetation, soil and climate within a biome is a distribution of equilibriums of similar soil-vegetation dynamics and that this dynamics is different across different biomes and ii) soil and vegetation are in dynamic equilibrium with climate while in static equilibrium with each other. In order to test the hypothesis, a two stage regression is considered using MOPEX/Hydrologic Synthesis Project dataset for basins in eastern United States. In the first stage, multivariate regression (Seemingly Unrelated Regression) is performed for each biome with soil (estimated porosity and slope of soil water retention curve) and vegetation characteristics (5-week NDVI gradient) as dependent variables and aridity index, vegetation and soil characteristics as independent variables for respective dependent variables. The regression residuals of the first stage along with aridity index then serve as second stage independent variables while actual vaporization to precipitation ratio (vapor index) serving as dependent variable. Insignificance, if revealed, of a first stage parameter allows us to reject the role of corresponding soil or vegetation characteristics in the co-evolution hypothesis. Meanwhile the significance of second stage regression parameter corresponding to a first stage residual allow us to reject the hypothesis that Budyko curve is a locus "solely" of climate-soil-vegetation co-evolution equilibrium points. Results suggest lack of evidence for soil-vegetation co-evolution in Prairies and Mixed/SouthEast Forests (unlike in Deciduous Forests) though climate plays a dominant role in explaining within biome soil and vegetation characteristics across all the biomes. Preliminary results indicate absence of effects beyond climate-soil-vegetation co-evolution in explaining the ratio of annual total minimum monthly flows to precipitation in Deciduous Forests though other three biome types show presence of effects beyond co-evolutionary. Such an analysis can yield insights into the nature of hydrologic change when assessed along the Budyko curve as well as non co-evolutionary effects such as anthropogenic effects on basin scale annual water balances.

Regional estimation of catchment-scale soil properties by means of streamflow recession analysis for use in distributed hydrological models

NASA Astrophysics Data System (ADS)

Vannier, Olivier; Braud, Isabelle; Anquetin, Sandrine

2013-04-01

The estimation of catchment-scale soil properties, such as water storage capacity and hydraulic conductivity, is of primary interest for the implementation of distributed hydrological models at the regional scale. This estimation is generally done on the basis of information provided by soil databases. However, such databases are often established for agronomic uses and generally do not document deep weathered rock horizons (i.e. pedologic horizons of type C and deeper), which can play a major role in water transfer and storages. Here we define the Drainable Storage Capacity Index (DSCI), an indicator that relies on the comparison of cumulated streamflow and precipitation to assess catchment-scale storage capacities. The DSCI is found to be reliable to detect underestimation of soil storage capacities in soil databases. We also use the streamflow recession analysis methodology defined by Brutsaert and Nieber (Water Resources Research 13(3), 1977) to estimate water storage capacities and lateral saturated hydraulic conductivities of the non-documented deep horizons. The analysis is applied to a sample of twenty-three catchments (0.2 km² - 291 km²) located in the Cévennes-Vivarais region (south of France). In a regionalisation purpose, the obtained results are compared to the dominant catchments geology. This highlights a clear hierarchy between the different geologies present in the area. Hard crystalline rocks are found to be associated to the thickest and less conductive deep soil horizons. Schist rocks present intermediate values of thickness and of saturated hydraulic conductivity, whereas sedimentary rocks and alluvium are found to be the less thick and the most conductive. Consequently, deep soil layers with thicknesses and hydraulic conductivities differing with the geology were added to a distributed hydrological model implemented over the Cévennes-Vivarais region. Preliminary simulations show a major improvement in terms of simulated discharge when compared to simulations done without deep soil layers. KEY WORDS: hydraulic soil properties, streamflow recession, deep soil horizons, soil databases, Boussinesq equation, storage capacity, regionalisation

Estimation of groundwater recharge to chalk and sandstone aquifers using simple soil models

NASA Astrophysics Data System (ADS)

Ragab, R.; Finch, J.; Harding, R.

1997-03-01

On the assumption that the water draining below the root zone is potentially available for groundwater recharge, two current UK methods for estimating annual groundwater recharge have been compared with a new soil model using data from four sites under permanent grass in the UK: two sites representative of the Chalk aquifer at Bridgest Farm (Hampshire) and Fleam Dyke (Cambridgeshire), and two sites on the Triassic sandstone at Bicton College (Devon) and Bacon Hall (Shropshire). A Four Root Layers Model (FRLM), the Penman-Grindley model and the UK Meteorological Office Rainfall and Evaporation Calculation System (MORECS) were used. The new soil model was run with potential evaporation as input both from the MORECS and from the Penman-Monteith equation. The models were run for the Chalk sites both with and without a bypass flow of 15% of rainfall. Bypass was not considered for the sandstone sites. The performance of the models was tested against neutron probes measurements of soil moisture deficits. In addition, the annual groundwater recharge estimated from the models was compared with the published values obtained from the 'zero flux plane' method. Generally, the Penman-Grindley model was more successful in predicting the time for soil to return to its field capacity than in predicting the magnitude of the soil moisture deficit. The annual groundwater recharge was predicted with reasonable accuracy. The MORECS relatively tended to overestimate the soil moisture deficits and to delay the time at which the soil returns to its field capacity. The consequences were underestimates of annual groundwater recharge, owing either to the higher values of potential evaporation calculated from the MORECS or tothe high available water capacity values associated with the soils under consideration. The new soil model (FRLM) predicts the soil moisture deficits successfully and hence is reliable in estimating the annual groundwater recharge. The model is capable of doing this with potential evaporation input calculated either from the MORECS or from the Penman-Monteith equation. The model also demonstrated that the inclusion of 15% of rainfall as bypass flow is viable for Chalk sites.

Microbial Nursery Production of High-Quality Biological Soil Crust Biomass for Restoration of Degraded Dryland Soils

PubMed Central

Velasco Ayuso, Sergio; Giraldo Silva, Ana; Nelson, Corey; Barger, Nichole N.

2016-01-01

ABSTRACT Biological soil crusts (biocrusts) are slow-growing, phototroph-based microbial assemblages that develop on the topsoils of drylands. Biocrusts help maintain soil fertility and reduce erosion. Because their loss through human activities has negative ecological and environmental health consequences, biocrust restoration is of interest. Active soil inoculation with biocrust microorganisms can be an important tool in this endeavor. We present a culture-independent, two-step process to grow multispecies biocrusts in open greenhouse nursery facilities, based on the inoculation of local soils with local biocrust remnants and incubation under seminatural conditions that maintain the essence of the habitat but lessen its harshness. In each of four U.S. Southwest sites, we tested and deployed combinations of factors that maximized growth (gauged as chlorophyll a content) while minimizing microbial community shifts (assessed by 16S rRNA sequencing and bioinformatics), particularly for crust-forming cyanobacteria. Generally, doubling the frequency of natural wetting events, a 60% reduction in sunlight, and inoculation by slurry were optimal. Nutrient addition effects were site specific. In 4 months, our approach yielded crusts of high inoculum quality reared on local soil exposed to locally matched climates, acclimated to desiccation, and containing communities minimally shifted in composition from local ones. Our inoculum contained abundant crust-forming cyanobacteria and no significant numbers of allochthonous phototrophs, and it was sufficient to treat ca. 6,000 m2 of degraded dryland soils at 1 to 5% of the typical crust biomass concentration, having started from a natural crust remnant as small as 6 to 30 cm2. IMPORTANCE Soil surface crusts can protect dryland soils from erosion, but they are often negatively impacted by human activities. Their degradation causes a loss of fertility, increased production of fugitive dust and intensity of dust storms with associated traffic problems, and provokes general public health hazards. Our results constitute an advance in the quest to actively restore biological soil covers by providing a means to obtain high-quality inoculum within a reasonable time (a few months), thereby allowing land managers to recover essential, but damaged, ecosystem services in a sustainable, self-perpetuating way as provided by biocrust communities. PMID:27864178

Coupled Soil-Plant Water Dynamics During Drought-Rewetting Transitions

NASA Astrophysics Data System (ADS)

Volkmann, T. H.; Haberer, K.; Gessler, A.; Weiler, M.

2013-12-01

The predicted climate and land-use changes could have dramatic effects on the water balance of the soil-vegetation system, particularly under frequent drought and subsequent rewetting conditions. Yet, estimation of these effects and associated consequences for the structure and functioning of ecosystems, groundwater recharge, drinking water availability, and the water cycle is currently impeded by gaps in our understanding of the spatiotemporal dynamics of soil water in the rooted soil horizons, the dynamics and driving physiological processes of plant water acquisition, and the transpiration from plant leaves under changing environmental conditions. Combining approaches from the disciplines of plant ecophysiology and soil and isotope hydrology, this work aims to fill this gap by quantitatively characterizing the interaction between plant water use - as affected by rooting patterns and ecophysiology of different plant functional groups - and the water balance of variably complex ecosystems with emphasis on drought and rewetting phases. Results from artificial drought and subsequent rewetting in field experiments using isotopically and dye (Brilliant Blue FCF) labeled water conducted on plots of various surface cover (bare soil, grass, beech, oak, vine) established on luvisol on loess in southwestern Germany are presented. Detailed spatiotemporal insights into the coupled short-term (hours to days) dynamics of soil and plant water during the experiments is facilitated by the application of newly developed techniques for high-frequency in-situ monitoring of stable isotope signatures in both pore water and transpired water using commercial laser-based spectrometers in conjunction with plant ecophysiological, soil physical state, and dye staining observations. On the one hand, the spatiotemporal patterns of plant water uptake are assessed and related to morphological and physiological traits driving plant water uptake, functional adaptations of plants to changes of soil water availability, and intra- and interspecies competition for water resources access. On the other hand, the effects of vegetation cover on infiltration, preferential flow paths characteristics, and soil water storage in the rooted soil horizons are investigated. The results of the experiments and the developed methodology will contribute to an improved understanding of ecosystem response and adaptation to drought and short-term changes in environmental conditions.

The epidemiology of soil-transmitted helminths in Bihar State, India.

PubMed

Greenland, Katie; Dixon, Ruth; Khan, Shabbir Ali; Gunawardena, Kithsiri; Kihara, Jimmy H; Smith, Jennifer L; Drake, Lesley; Makkar, Prerna; Raman, Sri; Singh, Sarman; Kumar, Sanjay

2015-05-01

Soil-transmitted helminths (STHs) infect over a billion individuals worldwide. In India, 241 million children are estimated to need deworming to avert the negative consequences STH infections can have on child health and development. In February-April 2011, 17 million children in Bihar State were dewormed during a government-led school-based deworming campaign. Prior to programme implementation, a study was conducted to assess STH prevalence in the school-age population to direct the programme. The study also investigated risk factors for STH infections, including caste, literacy, and defecation and hygiene practices, in order to inform the development of complementary interventions. A cross-sectional survey was conducted among children in 20 schools in Bihar. In addition to providing stool samples for identification of STH infections, children completed a short questionnaire detailing their usual defecation and hand-hygiene practices. Risk factors for STH infections were explored. In January-February 2011, 1279 school children aged four to seventeen provided stool samples and 1157 children also completed the questionnaire. Overall, 68% of children (10-86% across schools) were infected with one or more soil-transmitted helminth species. The prevalence of ascariasis, hookworm and trichuriasis was 52%, 42% and 5% respectively. The majority of children (95%) practiced open defecation and reported most frequently cleansing hands with soil (61%). Increasing age, lack of maternal literacy and certain castes were independently associated with hookworm infection. Absence of a hand-washing station at the schools was also independently associated with A. lumbricoides infection. STH prevalence in Bihar is high, and justifies mass deworming in school-aged children. Open defecation is common-place and hands are often cleansed using soil. The findings reported here can be used to help direct messaging appropriate to mothers with low levels of literacy and emphasise the importance of water and sanitation in the control of helminths and other diseases.

Use of stoichiometry to predict the abundance and functioning of root symbioses

NASA Astrophysics Data System (ADS)

Johnson, N. C.

2012-04-01

Plants form nutritional symbioses with fungi and bacteria and the importance of these partnerships varies with the mineral fertility of soil. There is strong evidence that plants acclimate and adapt to their local soil conditions through root symbioses; nitrogen limitation is ameliorated by symbiosis with diazotrophic prokaryotes and mycorrhizas ameliorate phosphorus limitation. Corollaries of ecological stoichiometry may be useful for predicting the abundance and functioning of mycorrhizas and N-fixation symbioses. A series of field experiments show that arbuscular mycorrhizal (AM) symbioses in grasslands in North America and in the African Serengeti are most beneficial to plant nutrition when plants are phosphorus limited and have sufficient nitrogen and carbon. A reciprocal inoculation experiment shows that locally adapted communities of AM fungi, associated soil organisms and plants arise such that mutualistic benefits are maximized; both AM fungi and plants grew best in their "home" soil-symbiont combination compared to "away" soil-symbiont combinations. Plants in their home combination acquired more limiting resource (either phosphorus or nitrogen) and consequently grew larger; similarly, AM fungi in their home combination formed more arbuscules and extraradical hyphae. Genetic analysis of the AM fungi inside plant roots indicate that these results correspond to variation in the community composition of AM fungi and also to variation in the symbiotic performance of local isolates of one particular species of AM fungus. The next step is to conduct landscape scale studies of root symbioses to test the hypothesis that plants cultivate microbial communities in and around their roots such that the species and ecotypes of microorganisms within these communities is customized for optimal nutrient acquisition under site-specific environmental conditions. If locally adapted communities of root and rhizosphere organisms are common, then plants may be optimizing their foraging by fostering microbial partnerships which compensate for unfavorable resource stoichiometry. This finding would suggest that the communities of microorganisms associated with plant roots are somewhat analogous to the communities of microorganisms that animals cultivate in their gut.

Influence of the Amino Acid Sequence on Protein-Mineral Interactions in Soil

NASA Astrophysics Data System (ADS)

Chacon, S. S.; Reardon, P. N.; Purvine, S.; Lipton, M. S.; Washton, N.; Kleber, M.

2017-12-01

The intimate associations between protein and mineral surfaces have profound impacts on nutrient cycling in soil. Proteins are an important source of organic C and N, and a subset of proteins, extracellular enzymes (EE), can catalyze the depolymerization of soil organic matter (SOM). Our goal was to determine how variation in the amino acid sequence could influence a protein's susceptibility to become chemically altered by mineral surfaces to infer the fate of adsorbed EE function in soil. We hypothesized that (1) addition of charged amino acids would enhance the adsorption onto oppositely charged mineral surfaces (2) addition of aromatic amino acids would increase adsorption onto zero charged surfaces (3) Increase adsorption of modified proteins would enhance their susceptibility to alterations by redox active minerals. To test these hypotheses, we generated three engineered proxies of a model protein Gb1 (IEP 4.0, 6.2 kDA) by inserting either negatively charged, positively charged or aromatic amino acids in the second loop. These modified proteins were allowed to interact with functionally different mineral surfaces (goethite, montmorillonite, kaolinite and birnessite) at pH 5 and 7. We used LC-MS/MS and solution-state Heteronuclear Single Quantum Coherence Spectroscopy NMR to observe modifications on engineered proteins as a consequence to mineral interactions. Preliminary results indicate that addition of any amino acids to a protein increase its susceptibility to fragmentation and oxidation by redox active mineral surfaces, and alter adsorption to the other mineral surfaces. This suggest that not all mineral surfaces in soil may act as sorbents for EEs and chemical modification of their structure should also be considered as an explanation for decrease in EE activity. Fragmentation of proteins by minerals can bypass the need to produce proteases, but microbial acquisition of other nutrients that require enzymes such as cellulases, ligninases or phosphatases may be hampered by mineral association.

The Epidemiology of Soil-Transmitted Helminths in Bihar State, India

PubMed Central

Greenland, Katie; Dixon, Ruth; Khan, Shabbir Ali; Gunawardena, Kithsiri; Kihara, Jimmy H.; Smith, Jennifer L.; Drake, Lesley; Makkar, Prerna; Singh, Sarman; Kumar, Sanjay

2015-01-01

Background Soil-transmitted helminths (STHs) infect over a billion individuals worldwide. In India, 241 million children are estimated to need deworming to avert the negative consequences STH infections can have on child health and development. In February-April 2011, 17 million children in Bihar State were dewormed during a government-led school-based deworming campaign. Prior to programme implementation, a study was conducted to assess STH prevalence in the school-age population to direct the programme. The study also investigated risk factors for STH infections, including caste, literacy, and defecation and hygiene practices, in order to inform the development of complementary interventions. Methods A cross-sectional survey was conducted among children in 20 schools in Bihar. In addition to providing stool samples for identification of STH infections, children completed a short questionnaire detailing their usual defecation and hand-hygiene practices. Risk factors for STH infections were explored. Results In January-February 2011, 1279 school children aged four to seventeen provided stool samples and 1157 children also completed the questionnaire. Overall, 68% of children (10-86% across schools) were infected with one or more soil-transmitted helminth species. The prevalence of ascariasis, hookworm and trichuriasis was 52%, 42% and 5% respectively. The majority of children (95%) practiced open defecation and reported most frequently cleansing hands with soil (61%). Increasing age, lack of maternal literacy and certain castes were independently associated with hookworm infection. Absence of a hand-washing station at the schools was also independently associated with A. lumbricoides infection. Conclusions STH prevalence in Bihar is high, and justifies mass deworming in school-aged children. Open defecation is common-place and hands are often cleansed using soil. The findings reported here can be used to help direct messaging appropriate to mothers with low levels of literacy and emphasise the importance of water and sanitation in the control of helminths and other diseases. PMID:25993697

Microbial hotspots and hot moments in soil

NASA Astrophysics Data System (ADS)

Kuzyakov, Yakov; Blagodatskaya, Evgenia

2015-04-01

Soils are the most heterogeneous parts of the biosphere, with an extremely high differentiation of properties and processes within nano- to macroscales. The spatial and temporal heterogeneity of input of labile organics by plants creates microbial hotspots over short periods of time - the hot moments. We define microbial hotspots as small soil volumes with much faster process rates and much more intensive interactions compared to the average soil conditions. Such hotspots are found in the rhizosphere, detritusphere, biopores (including drilosphere) and on aggregate surfaces, but hotspots are frequently of mixed origin. Hot moments are short-term events or sequences of events inducing accelerated process rates as compared to the averaged rates. Thus, hotspots and hot moments are defined by dynamic characteristics, i.e. by process rates. For this hotspot concept we extensively reviewed and examined the localization and size of hotspots, spatial distribution and visualization approaches, transport of labile C to and from hotspots, lifetime and process intensities, with a special focus on process rates and microbial activities. The fraction of active microorganisms in hotspots is 2-20 times higher than in the bulk soil, and their specific activities (i.e. respiration, microbial growth, mineralization potential, enzyme activities, RNA/DNA ratio) may also be much higher. The duration of hot moments in the rhizosphere is limited and is controlled by the length of the input of labile organics. It can last a few hours up to a few days. In the detritusphere, however, the duration of hot moments is regulated by the output - by decomposition rates of litter - and lasts for weeks and months. Hot moments induce succession in microbial communities and intense intra- and interspecific competition affecting C use efficiency, microbial growth and turnover. The faster turnover and lower C use efficiency in hotspots counterbalances the high C inputs, leading to the absence of strong increases in C stocks. Consequently, the intensification of fluxes is much stronger than the increase of pools. Maintenance of stoichiometric ratios by accelerated microbial growth in hotspots requires additional nutrients (e.g. N and P), causing their microbial mining from soil organic matter, i.e. priming effects. Consequently, priming effects are localized in microbial hotspots and are consequences of hot moments. Finally, we estimated the contribution of the hotspots to the whole soil profile and suggested that, irrespective of their volume, the hotspots are mainly responsible for the ecologically relevant processes in soil.

Soil heating and evaporation under extreme conditions: Forest fires and slash pile burns

NASA Astrophysics Data System (ADS)

Massman, W. J.

2011-12-01

Heating any soil during a sufficiently intense wild fire or prescribed burn can alter soil irreversibly, resulting in many significant and well known, long term biological, chemical, and hydrological effects. To better understand how fire impacts soil, especially considering the increasing probability of wildfires that is being driven by climate change and the increasing use of prescribe burns by land managers, it is important to better understand the dynamics of the coupled heat and moisture transport in soil during these extreme heating events. Furthermore, improving understanding of heat and mass transport during such extreme conditions should also provide insights into the associated transport mechanisms under more normal conditions as well. Here I describe the development of a new model designed to simulate soil heat and moisture transport during fires where the surface heating often ranges between 10,000 and 100,000 Wm-2 for several minutes to several hours. Model performance is tested against laboratory measurements of soil temperature and moisture changes at several depths during controlled heating events created with an extremely intense radiant heater. The laboratory tests employed well described soils with well known physical properties. The model, on the other hand, is somewhat unusual in that it employs formulations for temperature dependencies of the soil specific heat, thermal conductivity, and the water retention curve (relation between soil moisture and soil moisture potential). It also employs a new formulation for the surface evaporation rate as a component of the upper boundary condition, as well as the Newton-Raphson method and the generalized Thomas algorithm for inverting block tri-diagonal matrices to solve for soil temperature and soil moisture potential. Model results show rapid evaporation rates with significant vapor transfer not only to the free atmosphere above the soil, but to lower depths of the soil, where the vapor re-condenses ahead of the heating front. Consequently the trajectory of the solution (soil volumetric water content versus soil temperature) is very unusual and highly nonlinear, which may explain why more traditional methods (i.e., those based on finite difference or finite element approaches) tend to show more numerical instabilities than the Newton-Raphson method when used to model these extreme conditions. But, despite the intuitive and qualitative appeal of the model's numerical solution, it underestimates the rate of soil moisture loss observed during the laboratory trials, although the soil temperatures are reasonably well simulated.

Carbon dynamics within agricultural and native sites in the loess region of Western lowa

USGS Publications Warehouse

Manies, K.L.; Harden, J.W.; Kramer, L.; Parton, W.J.

2001-01-01

In order to quantify the historical changes in carbon storage that result from agricultural conversion, this study compared the carbon dynamics of two sites in the loess region of Iowa: a native prairie and a cropland. Field data were obtained to determine present-day carbon storage and its variability within a landscape (a stable ridgetop vs. eroding upper-midslope vs. depositional lower slope). Models were used to recreate the historical carbon budget of these sites and determine the cropland's potential to be a net CO2 source or sink, relative to the atmosphere. Regardless of slope position, the cropland site contains approximately half the amount of carbon as prairie. Variability in soil carbon storage within a site as a consequence of slope position is as large or larger (variations of 200-300%) than temporal variation (???200% at all slope positions). The most extreme difference in soil carbon storage between the cropland and prairie sites is found in the soil at the upper-midslope, which is the area of greatest erosion. The models estimate that 93-172% of the carbon in the original topsoil has been lost from the cropland's eroding midslope. Much of this carbon is derived from deeper soil horizons. Either a small sink or strong source of carbon to the atmosphere is created, depending on the fate of the eroded sediment and its associated carbon.

Potential for effects of land contamination on human health. 1.The case of cadmium.

PubMed

Kah, Melanie; Levy, Len; Brown, Colin

2012-01-01

A review of the epidemiological literature on the potential effects of land contamination shows that the largest body of contaminant-specific research relates to cadmium (Cd). First, a brief outline of the key issues related to the study of health impact of land contamination is presented. The recent literature is then reviewed for evidence of associations and possible causal relationships between exposure to Cd from land contamination and health impact. A large number of studies focusing on Cd arise because of the ready availability of biomarkers of exposure and effect and the demonstrated link between soil Cd and itai-itai disease (severe renal and bone disorders) via dietary exposure in Japan and China. Where dietary differences yield lower exposures, links have been established between Cd in soil and biomarkers of renal or bone dysfunctions, but not to health impacts per se. Potential effects of Cd exposure were also investigated for other health outcomes, including hypertension, cancer incidence, preterm delivery, and semen parameters. In contrast to renal and bone disorders, results are generally inconsistent and require further lines of evidence. Residence in locations with elevated concentrations of Cd in soil is a poor surrogate for exposure, and there are examples where residents in locations with elevated concentrations of Cd in soil did not appear to suffer serious health consequences.

Metals, minerals and microbes: geomicrobiology and bioremediation.

PubMed

Gadd, Geoffrey Michael

2010-03-01

Microbes play key geoactive roles in the biosphere, particularly in the areas of element biotransformations and biogeochemical cycling, metal and mineral transformations, decomposition, bioweathering, and soil and sediment formation. All kinds of microbes, including prokaryotes and eukaryotes and their symbiotic associations with each other and 'higher organisms', can contribute actively to geological phenomena, and central to many such geomicrobial processes are transformations of metals and minerals. Microbes have a variety of properties that can effect changes in metal speciation, toxicity and mobility, as well as mineral formation or mineral dissolution or deterioration. Such mechanisms are important components of natural biogeochemical cycles for metals as well as associated elements in biomass, soil, rocks and minerals, e.g. sulfur and phosphorus, and metalloids, actinides and metal radionuclides. Apart from being important in natural biosphere processes, metal and mineral transformations can have beneficial or detrimental consequences in a human context. Bioremediation is the application of biological systems to the clean-up of organic and inorganic pollution, with bacteria and fungi being the most important organisms for reclamation, immobilization or detoxification of metallic and radionuclide pollutants. Some biominerals or metallic elements deposited by microbes have catalytic and other properties in nanoparticle, crystalline or colloidal forms, and these are relevant to the development of novel biomaterials for technological and antimicrobial purposes. On the negative side, metal and mineral transformations by microbes may result in spoilage and destruction of natural and synthetic materials, rock and mineral-based building materials (e.g. concrete), acid mine drainage and associated metal pollution, biocorrosion of metals, alloys and related substances, and adverse effects on radionuclide speciation, mobility and containment, all with immense social and economic consequences. The ubiquity and importance of microbes in biosphere processes make geomicrobiology one of the most important concepts within microbiology, and one requiring an interdisciplinary approach to define environmental and applied significance and underpin exploitation in biotechnology.

Physicochemical properties and stability of thousand-year-old soil organic matter in boreal paleopodzols

NASA Astrophysics Data System (ADS)

Feng, Wen-Ting; Klaminder, Jonatan; Boily, Jean-Francois

2013-04-01

Soil organic matter (SOM) stabilization mechanisms are key to predict carbon (C) cycle responses to climate change, especially in critically sensitive ecosystems, such as the arctic and boreal ecosystems of Scandinavia (IPCC 2007). Interactions between organic matter and soil mineral components can be of particular importance. Their impacts on SOM stability are however not fully resolved. In this study, we present an exhaustive physicochemical characterization of SOM and soil mineral components of boreal paleopodzols formed over several thousands of years in northern Sweden. We also test the hypothesis that old SOM in these environments is strongly associated to mineral surfaces. This work was specifically focused on two relict podzolic profiles capped by more recently developed podzolic profile. Each of the three profiles consisted of a well developed E-horizon and of an underlying B-horizon enriched in secondary weathering products. Soil C age was greater with increasing depth, with the deepest horizon dating from the mid-Holocene. Organic C loadings, expressed in terms of C mass per mineral surface area, decreased from 0.52 to 0.31 mg C m-2 from deep to the deepest B horizons. A monolayer coating model could thus be used to suggest that C was mainly bonded to unsaturated mineral surfaces. Scanning electron microscopy and energy dispersive X-ray spectroscopy showed that, unlike in younger B-horizon, the oldest C of the deepest B-horizon did not accumulate in clusters. It was instead distributed more homogenously at the micrometer scale with soil mineral particles. X-ray photoelectron spectroscopy moreover showed that the top 1-10 nm of the mineral surfaces contained proportions of aliphatic-C, ether/alcohol-C, and amide-C that varied greatly amongst the three B horizons but not among the three E horizons. Different composition of SOM remained in deep E and B horizons, thereby suggesting a selective SOM preservation process that is controlled by the properties of the mineral matrix. Our findings therefore support the concept that soil mineral surfaces impact SOM stability. The importance of SOM-mineral surfaces complexation was demonstrated further through combined temperature-programmed desorption mass spectrometric Fourier transform infrared (TPD-MS-FTIR) experiments pointing to highly resilient forms of SOM associated to mineral particle surfaces. In summary, our study suggests organic matter sorption on mineral surfaces is important for SOM preservation at the millennial scale. Predicting the long-term fate of C in boreal regions should consequently account for such types of organo-mineral associations.

200 years of soil carbon nitrogen and phosphorus change across the United Kingdom

NASA Astrophysics Data System (ADS)

Tipping, Ed; Quinton, John; Davies, Jessica; Bell, Vicky; Carnell, Ed; Dragosits, Ulli; Muhammed, Shibu; Naden, Pam; Stuart, Marianne; Tomlinson, Sam; Whitmore, Andy; Wu, Lianhai

2015-04-01

Human intervention over the last 200 years has resulted in vast changes to the fluxes of nitrogen (N) and phosphorus (P) entering the United Kingdom's landscape. Industrialisation has resulted in N deposition, agricultural intensification has seen widespread use of N and P fertilizers and societal actions have resulted in extensive land use change. To understand the consequences of these anthropogenic inputs for our soils, freshwaters and ecosystems it is necessary to take an integrated long term large scale approach. Integration across the compartments of the critical zone - from atmosphere, plants to soil and stream - is necessary in order to trace the effects of deposition, fertilization, cultivation and land use change. Coherent integration of C, N and P dynamics is also crucial, as biological processes tightly couple these cycles, so that in unison C N and P control the generation of biomass and consequent production of soil organic matter, having knock on effects for dissolved and particulate fluxes and ecosystem function. The Long-Term Large-Scale (LTLS) project is developing an integrated model that simulates the pools and fluxes of carbon, nitrogen and phosphorus (C, N, and P) between atmospheric, vegetation, soil and aquatic systems for the whole of the United Kingdom for a period spanning from the onset of the industrial revolution up until the present day. In this paper we will present results demonstrating the changes in the soil macronutrient cycles in response to agrarian and social change in the United Kingdom over the last 200 years

Soil Organic Carbon Pools and Stocks in Permafrost-Affected Soils on the Tibetan Plateau

PubMed Central

Dörfer, Corina; Kühn, Peter; Baumann, Frank; He, Jin-Sheng; Scholten, Thomas

2013-01-01

The Tibetan Plateau reacts particularly sensitively to possible effects of climate change. Approximately two thirds of the total area is affected by permafrost. To get a better understanding of the role of permafrost on soil organic carbon pools and stocks, investigations were carried out including both discontinuous (site Huashixia, HUA) and continuous permafrost (site Wudaoliang, WUD). Three organic carbon fractions were isolated using density separation combined with ultrasonic dispersion: the light fractions (<1.6 g cm−3) of free particulate organic matter (FPOM) and occluded particulate organic matter (OPOM), plus a heavy fraction (>1.6 g cm−3) of mineral associated organic matter (MOM). The fractions were analyzed for C, N, and their portion of organic C. FPOM contained an average SOC content of 252 g kg−1. Higher SOC contents (320 g kg−1) were found in OPOM while MOM had the lowest SOC contents (29 g kg−1). Due to their lower density the easily decomposable fractions FPOM and OPOM contribute 27% (HUA) and 22% (WUD) to the total SOC stocks. In HUA mean SOC stocks (0–30 cm depth) account for 10.4 kg m−2, compared to 3.4 kg m−2 in WUD. 53% of the SOC is stored in the upper 10 cm in WUD, in HUA only 39%. Highest POM values of 36% occurred in profiles with high soil moisture content. SOC stocks, soil moisture and active layer thickness correlated strongly in discontinuous permafrost while no correlation between SOC stocks and active layer thickness and only a weak relation between soil moisture and SOC stocks could be found in continuous permafrost. Consequently, permafrost-affected soils in discontinuous permafrost environments are susceptible to soil moisture changes due to alterations in quantity and seasonal distribution of precipitation, increasing temperature and therefore evaporation. PMID:23468904

The effect of nanoparticles and humic acid on technology critical element concentrations in aqueous solutions with soil and sand.

PubMed

Stepka, Zane; Dror, Ishai; Berkowitz, Brian

2018-01-01

As a consequence of their growing use in electronic and industrial products, increasing amounts of technology critical elements (TCEs) are being released to the environment. Currently little is known about the fate of many of these elements. Initial research on their potential environmental impact identifies TCEs as emerging contaminants. TCE movement in the environment is often governed by water systems. Research on "natural" waters so far demonstrates that TCEs tend to be associated with suspended particulate matter (SPM), which influences TCE aqueous concentrations (here: concentration of TCEs in dissolved form and attached to SPM) and transport. However, the relative potential of different types of SPM to interact with TCEs is unknown. Here we examine the potential of various types of particulate matter, namely different nanoparticles (NPs; Al 2 O 3, SiO 2 , CeO 2 , ZnO, montmorillonite, Ag, Au and carbon dots) and humic acid (HA), to impact TCE aqueous concentrations in aqueous solutions with soil and sand, and thus influence TCE transport in soil-water environments. We show that a combination of NPs and HA, and not NPs or HA individually, increases the aqueous concentrations of TCEs in soil solutions, for all tested NPs regardless of their type. TCEs retained on SPM, however, settle with time. In solutions with sand, HA alone is as influential as NPs+HA in keeping TCEs in the aqueous phase. Among NPs, Ag-NPs and Au-NPs demonstrate the highest potential for TCE transport. These results suggest that in natural soil-water environments, once TCEs are retained by soil, their partitioning to the aqueous phase by through-flowing water is unlikely. However, if TCEs are introduced to soil-water environments as part of solutions rich in NPs and HA, it is likely that NP and HA combinations can increase TCE stability in the aqueous phase and prevent their retention on soil and sand, thus facilitating TCE transport. Copyright © 2017 Elsevier B.V. All rights reserved.

The effects of permafrost thaw on soil hydrologic, thermal, and carbon dynamics in an Alaskan peatland

USGS Publications Warehouse

O'Donnell, Jonathan A.; Jorgenson, M. Torre; Harden, Jennifer W.; McGuire, A. David; Kanevskiy, Mikhail Z.; Wickland, Kimberly P.

2012-01-01

Recent warming at high-latitudes has accelerated permafrost thaw in northern peatlands, and thaw can have profound effects on local hydrology and ecosystem carbon balance. To assess the impact of permafrost thaw on soil organic carbon (OC) dynamics, we measured soil hydrologic and thermal dynamics and soil OC stocks across a collapse-scar bog chronosequence in interior Alaska. We observed dramatic changes in the distribution of soil water associated with thawing of ice-rich frozen peat. The impoundment of warm water in collapse-scar bogs initiated talik formation and the lateral expansion of bogs over time. On average, Permafrost Plateaus stored 137 ± 37 kg C m-2, whereas OC storage in Young Bogs and Old Bogs averaged 84 ± 13 kg C m-2. Based on our reconstructions, the accumulation of OC in near-surface bog peat continued for nearly 1,000 years following permafrost thaw, at which point accumulation rates slowed. Rapid decomposition of thawed forest peat reduced deep OC stocks by nearly half during the first 100 years following thaw. Using a simple mass-balance model, we show that accumulation rates at the bog surface were not sufficient to balance deep OC losses, resulting in a net loss of OC from the entire peat column. An uncertainty analysis also revealed that the magnitude and timing of soil OC loss from thawed forest peat depends substantially on variation in OC input rates to bog peat and variation in decay constants for shallow and deep OC stocks. These findings suggest that permafrost thaw and the subsequent release of OC from thawed peat will likely reduce the strength of northern permafrost-affected peatlands as a carbon dioxide sink, and consequently, will likely accelerate rates of atmospheric warming.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Solc, J.

The reclamation effort typically deals with consequences of mining activity instead of being planned well before the mining. Detailed assessment of principal hydro- and geochemical processes participating in pore and groundwater chemistry evolution was carried out at three surface mine localities in North Dakota-the Fritz mine, the Indian Head mine, and the Velva mine. The geochemical model MINTEQUA2 and advanced statistical analysis coupled with traditional interpretive techniques were used to determine site-specific environmental characteristics and to compare the differences between study sites. Multivariate statistical analysis indicates that sulfate, magnesium, calcium, the gypsum saturation index, and sodium contribute the most tomore » overall differences in groundwater chemistry between study sites. Soil paste extract pH and EC measurements performed on over 3700 samples document extremely acidic soils at the Fritz mine. The number of samples with pH <5.5 reaches 80%-90% of total samples from discrete depth near the top of the soil profile at the Fritz mine. Soil samples from Indian Head and Velva do not indicate the acidity below the pH of 5.5 limit. The percentage of samples with EC > 3 mS cm{sup -1} is between 20% and 40% at the Fritz mine and below 20% for samples from Indian Head and Velva. The results of geochemical modeling indicate an increased tendency for gypsum saturation within the vadose zone, particularly within the lands disturbed by mining activity. This trend is directly associated with increased concentrations of sulfate anions as a result of mineral oxidation. Geochemical modeling, statistical analysis, and soil extract pH and EC measurements proved to be reliable, fast, and relatively cost-effective tools for the assessment of soil acidity, the extent of the oxidation zone, and the potential for negative impact on pore and groundwater chemistry.« less

Biotic responses buffer warming-induced soil organic carbon loss in Arctic tundra.

PubMed

Liang, Junyi; Xia, Jiangyang; Shi, Zheng; Jiang, Lifen; Ma, Shuang; Lu, Xingjie; Mauritz, Marguerite; Natali, Susan M; Pegoraro, Elaine; Penton, C Ryan; Plaza, César; Salmon, Verity G; Celis, Gerardo; Cole, James R; Konstantinidis, Konstantinos T; Tiedje, James M; Zhou, Jizhong; Schuur, Edward A G; Luo, Yiqi

2018-05-26

Climate warming can result in both abiotic (e.g., permafrost thaw) and biotic (e.g., microbial functional genes) changes in Arctic tundra. Recent research has incorporated dynamic permafrost thaw in Earth system models (ESMs) and indicates that Arctic tundra could be a significant future carbon (C) source due to the enhanced decomposition of thawed deep soil C. However, warming-induced biotic changes may influence biologically related parameters and the consequent projections in ESMs. How model parameters associated with biotic responses will change under warming and to what extent these changes affect projected C budgets have not been carefully examined. In this study, we synthesized six data sets over five years from a soil warming experiment at the Eight Mile Lake, Alaska, into the Terrestrial ECOsystem (TECO) model with a probabilistic inversion approach. The TECO model used multiple soil layers to track dynamics of thawed soil under different treatments. Our results show that warming increased light use efficiency of vegetation photosynthesis but decreased baseline (i.e., environment-corrected) turnover rates of SOC in both the fast and slow pools in comparison with those under control. Moreover, the parameter changes generally amplified over time, suggesting processes of gradual physiological acclimation and functional gene shifts of both plants and microbes. The TECO model predicted that field warming from 2009 to 2013 resulted in cumulative C losses of 224 or 87 g m -2 , respectively, without or with changes in those parameters. Thus, warming-induced parameter changes reduced predicted soil C loss by 61%. Our study suggests that it is critical to incorporate biotic changes in ESMs to improve the model performance in predicting C dynamics in permafrost regions. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Contamination and health risks from heavy metals in cultivated soil in Zhangjiakou City of Hebei Province, China.

PubMed

Liang, Qian; Xue, Zhan-Jun; Wang, Fei; Sun, Zhi-Mei; Yang, Zhi-Xin; Liu, Shu-Qing

2015-12-01

A total of 79 topsoil samples (ranging from 0 to 20 cm in depth) were collected from a grape cultivation area of Zhangjiakou City, China. The total concentrations of As, Cd, Hg, Cr, Cu, Mn, Ni, Pb, and Zn in soil samples were determined to evaluate pollution levels and associated health risks in each sample. Pollution levels were calculated using enrichment factors (EF) and geoaccumulation index (I geo). Health risks for adults and children were quantified using hazard indexes (HI) and aggregate carcinogenic risks (ACR). The mean concentrations of measured heavy metals Cd, Hg, and Cu, only in the grape cultivation soil samples, were higher than the background values of heavy metals in Hebei Province. According to principal component analysis (PCA), the anthropogenic activities related to agronomic and fossil fuel combustion practices attributed to higher accumulations of Cd, Hg, and Cu, which have slightly polluted about 10-40% of the sampled soils. However, the HI for all of the heavy metals were lower than 1 (within safe limits), and the ACR of As was in the 10(-6)-10(-4) range (a tolerable level). This suggests the absence of both non-carcinogenic and carcinogenic health risks for adults and children through oral ingestion and dermal absorption exposure pathways in the studied area. It should be also noted that the heightened vulnerability of children to health risks was accounted for higher HI and ACR values. Consequently, heavy metal concentrations (e.g., Cd, Hg, Cu) should be periodically monitored in these soils and improved soil management practices are required to minimize possible impacts on children's health.

Agricultural land abandonment in Mediterranean environment provides ecosystem services via soil carbon sequestration.

PubMed

Novara, Agata; Gristina, Luciano; Sala, Giovanna; Galati, Antonino; Crescimanno, Maria; Cerdà, Artemi; Badalamenti, Emilio; La Mantia, Tommaso

2017-01-15

Abandonment of agricultural land leads to several consequences for ecosystem functions. Agricultural abandonment may be a significant and low cost strategy for carbon sequestration and mitigation of anthropogenic CO 2 emissions due to the vegetation recovery and increase in soil organic matter. The aim of this study was to: (i) estimate the influence of different Soil Regions (areas characterized by a typical climate and parent material association) and Bioclimates (zones with homogeneous climatic regions and thermotype indices) on soil organic carbon (SOC) dynamics after agricultural land abandonment; and (ii) to analyse the efficiency of the agri-environment policy (agri-environment measures) suggested by the European Commission in relation to potential SOC stock ability in the Sicilian Region (Italy). In order to quantify the effects of agricultural abandonment on SOC, a dataset with original data that was sampled in Sicily and existing data from the literature were analysed according to the IPCC (Intergovernmental Panel on Climate Change) methodology. Results showed that abandonment of cropland soils increased SOC stock by 9.03MgCha -1 on average, ranging from 5.4MgCha -1 to 26.7MgCha -1 in relation to the Soil Region and Bioclimate. The estimation of SOC change after agricultural use permitted calculation of the payments for ecosystem service (PES) of C sequestration after agricultural land abandonment in relation to environmental benefits, increasing in this way the efficiency of PES. Considering the 14,337ha of abandoned lands in Sicily, the CO 2 emission as a whole was reduced by 887,745Mg CO 2 . Therefore, it could be concluded that abandoned agricultural fields represents a valid opportunity to mitigate agriculture sector emissions in Sicily. Copyright © 2016 Elsevier B.V. All rights reserved.

Advancing Methods for Estimating Soil Nitrous Oxide Emissions by Incorporating Freeze-Thaw Cycles into a Tier 3 Model-Based Assessment

NASA Astrophysics Data System (ADS)

Ogle, S. M.; DelGrosso, S.; Parton, W. J.

2017-12-01

Soil nitrous oxide emissions from agricultural management are a key source of greenhouse gas emissions in many countries due to the widespread use of nitrogen fertilizers, manure amendments from livestock production, planting legumes and other practices that affect N dynamics in soils. In the United States, soil nitrous oxide emissions have ranged from 250 to 280 Tg CO2 equivalent from 1990 to 2015, with uncertainties around 20-30 percent. A Tier 3 method has been used to estimate the emissions with the DayCent ecosystem model. While the Tier 3 approach is considerably more accurate than IPCC Tier 1 methods, there is still the possibility of biases in emission estimates if there are processes and drivers that are not represented in the modeling framework. Furthermore, a key principle of IPCC guidance is that inventory compilers estimate emissions as accurately as possible. Freeze-thaw cycles and associated hot moments of nitrous oxide emissions are one of key drivers influencing emissions in colder climates, such as the cold temperate climates of the upper Midwest and New England regions of the United States. Freeze-thaw activity interacts with management practices that are increasing N availability in the plant-soil system, leading to greater nitrous oxide emissions during transition periods from winter to spring. Given the importance of this driver, the DayCent model has been revised to incorproate freeze-thaw cycles, and the results suggests that including this driver can significantly modify the emissions estimates in cold temperate climate regions. Consequently, future methodological development to improve estimation of nitrous oxide emissions from soils would benefit from incorporating freeze-thaw cycles into the modeling framework for national territories with a cold climate.

Spreading topsoil encourages ecological restoration on embankments: soil fertility, microbial activity and vegetation cover.

PubMed

Rivera, Desirée; Mejías, Violeta; Jáuregui, Berta M; Costa-Tenorio, Marga; López-Archilla, Ana Isabel; Peco, Begoña

2014-01-01

The construction of linear transport infrastructure has severe effects on ecosystem functions and properties, and the restoration of the associated roadslopes contributes to reduce its impact. This restoration is usually approached from the perspective of plant cover regeneration, ignoring plant-soil interactions and the consequences for plant growth. The addition of a 30 cm layer of topsoil is a common practice in roadslope restoration projects to increase vegetation recovery. However topsoil is a scarce resource. This study assesses the effects of topsoil spreading and its depth (10 to 30 cm) on two surrogates of microbial activity (β-glucosidase and phosphatase enzymes activity and soil respiration), and on plant cover, plant species richness and floristic composition of embankment vegetation. The study also evaluates the differences in selected physic-chemical properties related to soil fertility between topsoil and the original embankment substrate. Topsoil was found to have higher values of organic matter (11%), nitrogen (44%), assimilable phosphorous (50%) and silt content (54%) than the original embankment substrate. The topsoil spreading treatment increased microbial activity, and its application increased β-glucosidase activity (45%), phosphatase activity (57%) and soil respiration (60%). Depth seemed to affect soil respiration, β-glucosidase and phosphatase activity. Topsoil application also enhanced the species richness of restored embankments in relation to controls. Nevertheless, the depth of the spread topsoil did not significantly affect the resulting plant cover, species richness or floristic composition, suggesting that both depths could have similar effects on short-term recovery of the vegetation cover. A significant implication of these results is that it permits the application of thinner topsoil layers, with major savings in this scarce resource during the subsequent slope restoration work, but the quality of topsoil relative to the original substrate should be previously assessed on a site by site basis.

Variation in soil enzyme activity as a function of vegetation amount, type, and spatial structure in fire-prone Mediterranean shrublands.

PubMed

Mayor, Ángeles G; Goirán, Silvana B; Vallejo, V Ramón; Bautista, Susana

2016-12-15

Fire-prone Mediterranean shrublands may be seriously threatened by land degradation due to progressive opening of the vegetation cover driven by increasing drought and fire recurrence. However, information about the consequences of this opening process for critical ecosystem functions is scant. In this work, we studied the influence of vegetation amount, type, and spatial pattern in the variation of extracellular soil enzyme activity (acid phosphatase, β-glucosidase, and urease) in fire-prone shrublands in eastern Spain. Soil was sampled in vegetation-patch and open-interpatch microsites in 15 shrubland sites affected by large wildfires in 1991. On average, the activities of the three enzymes were 1.5 (β-glucosidase and urease) to 1.7 (acid phosphatase) times higher in soils under vegetation patches than in adjacent interpatches. In addition, phosphatase activity for both microsites significantly decreased with the fragmentation of the vegetation. This result was attributed to a lower influence of roots -the main source of acid phosphatase- in the bigger interpatches of the sites with lower patch cover, and to feedbacks between vegetation pattern, redistribution of resources, and soil quality during post-fire vegetation dynamics. Phosphatase activity was also 1.2 times higher in patches of resprouter plants than in patches of non-resprouters, probably due to the faster post-fire recovery and older age of resprouter patches in these fire-prone ecosystems. The influence on the studied enzymes of topographic and climatic factors acting at the landscape scale was insignificant. According to our results, variations in the cover, pattern, and composition of vegetation patches may have profound impacts on soil enzyme activity and associated nutrient cycling processes in fire-prone Mediterranean shrublands, particularly in those related to phosphorus. Copyright © 2016 Elsevier B.V. All rights reserved.

Use of thermal infrared and colour infrared imagery to detect crop moisture stress. [Alberta, Canada

NASA Technical Reports Server (NTRS)

Mckenzie, R. C.; Clark, N. F.; Cihlar, J. (Principal Investigator)

1979-01-01

The author has identified the following significant results. In the presence of variable plant cover (primarily percent cover) and variable available water content, the remotely sensed apparent temperatures correlate closely with plant cover and poorly with soil water. To the extent that plant cover is not systematically related to available soil water, available water in the root zone values may not be reliably predicted from the thermal infrared data. On the other hand, if plant cover is uniform and the soil surface is shown in a minor way, the thermal data indicate plant stress and consequently available water in the soil profile.

What's in our soil?: how soil pollution affects earthworm movement patterns

NASA Astrophysics Data System (ADS)

Whitmore, T.

2017-12-01

Earthworms are an important member of many ecosystems because they contribute to soil quality and are a major food source for many organisms. In this project, we assessed the impacts soil pollution has on the burrowing patterns of earthworms. In each experiment, we introduced 10 earthworms to a unique pollutant and let them equilibrate for up to a week. The results indicated that earthworms migrate towards the introduced liquid regardless of its impact on them. The liquid pollutants introduced seemed to attract the earthworms. This can have harmful consequences, especially in the case of the motor oil, which killed multiple worms.

Sequestration of Carbon in Mycorrhizal Fungi Under Nitrogen Fertilization

NASA Astrophysics Data System (ADS)

Treseder, K. K.; Turner, K. M.

2005-12-01

Mycorrhizal fungi are root symbionts that facilitate plant uptake of soil nutrients in exchange for plant carbohydrates. They grow in almost every terrestrial ecosystem on earth, form relationships with about 80% of plant species, and receive 10 to 20% of the carbon fixed by their host plants. As such, they could potentially sequester a significant amount of carbon in ecosystems. We hypothesized that nitrogen fertilization would decrease carbon storage in mycorrhizal fungi, because plants should reduce investment of carbon in mycorrhizal fungi when nitrogen availability is high. We measured the abundance of two major groups of mycorrhizal fungi, arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) fungi, in control and nitrogen-fertilized plots within three boreal ecosystems of inland Alaska. The ecosystems represented different recovery stages following severe fire, and comprised a young site dominated by AM fungi, an old site dominated by ECM fungi, and an intermediate site co-dominated by both groups. Pools of mycorrhizal carbon included root-associated AM and ECM structures, soil-associated AM hyphae, and soil-associated glomalin. Glomalin is a glycoprotein produced only by AM fungi. It is present in the cell walls of AM hyphae, and then is deposited in the soil as the hyphae senesce. Nitrogen significantly altered total mycorrhizal carbon pools, but its effect varied by site (site * N interaction, P = 0.05). Under nitrogen fertilization, mycorrhizal carbon was reduced from 99 to 50 g C m2 in the youngest site, was increased from 124 to 203 g C m2 in the intermediate-aged site, and remained at 35 g C m2 in the oldest site. The changes in total mycorrhizal carbon stocks were driven mostly by changes in glomalin (site * N interaction, P = 0.05), and glomalin stocks were strongly correlated with AM hyphal abundance (P < 0.01). Nevertheless, it is not clear why AM hyphae responded differently to nitrogen fertilization in the different sites. Carbon stocks within root-associated AM structures increased significantly with nitrogen fertilization across all sites (P = 0.001), as did root-associated ECM structures (P = 0.021). The amount of carbon sequestered within living mycorrhizal structures (0.013 to 0.21 g m2), however, was modest compared to that of glomalin (91 g m2). We conclude that allocation by AM fungi to hyphal growth influenced the size of glomalin stocks in the soil, and that nitrogen fertilization altered investment in hyphal growth, with potential consequences for soil carbon storage. However, the nitrogen response was inconsistent among boreal forest ecosystems. An understanding of the mechanisms underlying this variation would improve our ability to predict ecosystem feedbacks to global change.

Climate Change Impairs Nitrogen Cycling in European Beech Forests.

PubMed

Dannenmann, Michael; Bimüller, Carolin; Gschwendtner, Silvia; Leberecht, Martin; Tejedor, Javier; Bilela, Silvija; Gasche, Rainer; Hanewinkel, Marc; Baltensweiler, Andri; Kögel-Knabner, Ingrid; Polle, Andrea; Schloter, Michael; Simon, Judy; Rennenberg, Heinz

2016-01-01

European beech forests growing on marginal calcareous soils have been proposed to be vulnerable to decreased soil water availability. This could result in a large-scale loss of ecological services and economical value in a changing climate. In order to evaluate the potential consequences of this drought-sensitivity, we investigated potential species range shifts for European beech forests on calcareous soil in the 21st century by statistical species range distribution modelling for present day and projected future climate conditions. We found a dramatic decline by 78% until 2080. Still the physiological or biogeochemical mechanisms underlying the drought sensitivity of European beech are largely unknown. Drought sensitivity of beech is commonly attributed to plant physiological constraints. Furthermore, it has also been proposed that reduced soil water availability could promote nitrogen (N) limitation of European beech due to impaired microbial N cycling in soil, but this hypothesis has not yet been tested. Hence we investigated the influence of simulated climate change (increased temperatures, reduced soil water availability) on soil gross microbial N turnover and plant N uptake in the beech-soil interface of a typical mountainous beech forest stocking on calcareous soil in SW Germany. For this purpose, triple 15N isotope labelling of intact beech seedling-soil-microbe systems was combined with a space-for-time climate change experiment. We found that nitrate was the dominant N source for beech natural regeneration. Reduced soil water content caused a persistent decline of ammonia oxidizing bacteria and therefore, a massive attenuation of gross nitrification rates and nitrate availability in the soil. Consequently, nitrate and total N uptake of beech seedlings were strongly reduced so that impaired growth of beech seedlings was observed already after one year of exposure to simulated climatic change. We conclude that the N cycle in this ecosystem and here specifically nitrification is vulnerable to reduced water availability, which can directly lead to nutritional limitations of beech seedlings. This tight link between reduced water availability, drought stress for nitrifiers, decreased gross nitrification rates and nitrate availability and finally nitrate uptake by beech seedlings could represent the Achilles' heel for beech under climate change stresses.

Climate Change Impairs Nitrogen Cycling in European Beech Forests

PubMed Central

Dannenmann, Michael; Bilela, Silvija; Gasche, Rainer; Hanewinkel, Marc; Baltensweiler, Andri; Kögel-Knabner, Ingrid; Polle, Andrea; Schloter, Michael; Simon, Judy; Rennenberg, Heinz

2016-01-01

European beech forests growing on marginal calcareous soils have been proposed to be vulnerable to decreased soil water availability. This could result in a large-scale loss of ecological services and economical value in a changing climate. In order to evaluate the potential consequences of this drought-sensitivity, we investigated potential species range shifts for European beech forests on calcareous soil in the 21st century by statistical species range distribution modelling for present day and projected future climate conditions. We found a dramatic decline by 78% until 2080. Still the physiological or biogeochemical mechanisms underlying the drought sensitivity of European beech are largely unknown. Drought sensitivity of beech is commonly attributed to plant physiological constraints. Furthermore, it has also been proposed that reduced soil water availability could promote nitrogen (N) limitation of European beech due to impaired microbial N cycling in soil, but this hypothesis has not yet been tested. Hence we investigated the influence of simulated climate change (increased temperatures, reduced soil water availability) on soil gross microbial N turnover and plant N uptake in the beech-soil interface of a typical mountainous beech forest stocking on calcareous soil in SW Germany. For this purpose, triple 15N isotope labelling of intact beech seedling-soil-microbe systems was combined with a space-for-time climate change experiment. We found that nitrate was the dominant N source for beech natural regeneration. Reduced soil water content caused a persistent decline of ammonia oxidizing bacteria and therefore, a massive attenuation of gross nitrification rates and nitrate availability in the soil. Consequently, nitrate and total N uptake of beech seedlings were strongly reduced so that impaired growth of beech seedlings was observed already after one year of exposure to simulated climatic change. We conclude that the N cycle in this ecosystem and here specifically nitrification is vulnerable to reduced water availability, which can directly lead to nutritional limitations of beech seedlings. This tight link between reduced water availability, drought stress for nitrifiers, decreased gross nitrification rates and nitrate availability and finally nitrate uptake by beech seedlings could represent the Achilles’ heel for beech under climate change stresses. PMID:27410969

Ecological impacts of arable intensification in Europe.

PubMed

Stoate, C; Boatman, N D; Borralho, R J; Carvalho, C R; de Snoo, G R; Eden, P

2001-12-01

Although arable landscapes have a long history, environmental problems have accelerated in recent decades. The effects of these changes are usually externalized, being greater for society as a whole than for the farms on which they operate, and incentives to correct them are therefore largely lacking. Arable landscapes are valued by society beyond the farming community, but increased mechanization and farm size, simplification of crop rotations, and loss of non-crop features, have led to a reduction in landscape diversity. Low intensity arable systems have evolved a characteristic and diverse fauna and flora, but development of high input, simplified arable systems has been associated with a decline in biodiversity. Arable intensification has resulted in loss of non-crop habitats and simplification of plant and animal communities within crops, with consequent disruption to food chains and declines in many farmland species. Abandonment of arable management has also led to the replacement of such wildlife with more common and widespread species. Soils have deteriorated as a result of erosion, compaction, loss of organic matter and contamination with pesticides, and in some areas, heavy metals. Impacts on water are closely related to those on soils as nutrient and pesticide pollution of water results from surface runoff and subsurface flow, often associated with soil particles, which themselves have economic and ecological impacts. Nitrates and some pesticides also enter groundwater following leaching from arable land. Greatest impacts are associated with simplified, high input arable systems. Intensification of arable farming has been associated with pollution of air by pesticides, NO2 and CO2, while the loss of soil organic matter has reduced the system's capacity for carbon sequestration. International trade contributes to global climate change through long distance transport of arable inputs and products. The EU Rural Development Regulation (1257/99) provides an opportunity to implement measures for alleviating ecological impacts of arable management through a combination of cross-compliance and agri-environment schemes. To alleviate the problems described in this paper, such measures should take account of opportunities for public/private partnerships and should integrate social, cultural, economic and ecological objectives for multifunctional land use.

[Soil and forest structure in the Colombian Amazon].

PubMed

Calle-Rendón, Bayron R; Moreno, Flavio; Cárdenas López, Dairon

2011-09-01

Forests structural differences could result of environmental variations at different scales. Because soils are an important component of plant's environment, it is possible that edaphic and structural variables are associated and that, in consequence, spatial autocorrelation occurs. This paper aims to answer two questions: (1) are structural and edaphic variables associated at local scale in a terra firme forest of Colombian Amazonia? and (2) are these variables regionalized at the scale of work? To answer these questions we analyzed the data of a 6ha plot established in a terra firme forest of the Amacayacu National Park. Structural variables included basal area and density of large trees (diameter > or = 10cm) (Gdos and Ndos), basal area and density of understory individuals (diameter < 10cm) (Gsot and Nsot) and number of species of large trees (sp). Edaphic variables included were pH, organic matter, P, Mg, Ca, K, Al, sand, silt and clay. Structural and edaphic variables were reduced through a principal component analysis (PCA); then, the association between edaphic and structural components from PCA was evaluated by multiple regressions. The existence of regionalization of these variables was studied through isotropic variograms, and autocorrelated variables were spatially mapped. PCA found two significant components for structure, corresponding to the structure of large trees (G, Gdos, Ndos and sp) and of small trees (N, Nsot and Gsot), which explained 43.9% and 36.2% of total variance, respectively. Four components were identified for edaphic variables, which globally explained 81.9% of total variance and basically represent drainage and soil fertility. Regression analyses were significant (p < 0.05) and showed that the structure of both large and small trees is associated with greater sand contents and low soil fertility, though they explained a low proportion of total variability (R2 was 4.9% and 16.5% for the structure of large trees and small tress, respectively). Variables with spatial autocorrelation were the structure of small trees, Al, silt, and sand. Among them, Nsot and sand content showed similar patterns of spatial distribution inside the plot.

Multiseasonal variables in digital image enhancements for geological applications

NASA Technical Reports Server (NTRS)

Parada, N. D. J. (Principal Investigator); Vitorello, I.; Almeidafilho, R.

1984-01-01

Examples of enhanced multiseasonal orbital imagery illustrate the influence of multiseasonal changes in their spatial and spectral attributes, and consequently in their application to structural geology and lithological discrimination. Shadow effects associated with appropriate solar elevation and azimuth effects enhance the spatial attributes but not the spectral. In this case, variations in illumination conditions should be minimized by selecting images with high solar elevation and by the use of techniques that minimize illumination conditions. Multiseasonal imagery should be used in the identification of spectral contrast changes of rock-soil-vegetation associations which can provide evidences of related lithological units and structural features. The extraction of maximum geological information requires, at least, a fall/winter and a spring/summer scene from which spatial, spectral and multiseasonal attributes can be adequately explored.

Input related microbial carbon dynamic of soil organic matter in particle size fractions

NASA Astrophysics Data System (ADS)

Gude, A.; Kandeler, E.; Gleixner, G.

2012-04-01

This paper investigated the flow of carbon into different groups of soil microorganisms isolated from different particle size fractions. Two agricultural sites of contrasting organic matter input were compared. Both soils had been submitted to vegetation change from C3 (Rye/Wheat) to C4 (Maize) plants, 25 and 45 years ago. Soil carbon was separated into one fast-degrading particulate organic matter fraction (POM) and one slow-degrading organo-mineral fraction (OMF). The structure of the soil microbial community were investigated using phospholipid fatty acids (PLFA), and turnover of single PLFAs was calculated from the changes in their 13C content. Soil enzyme activities involved in the degradation of carbohydrates was determined using fluorogenic MUF (methyl-umbelliferryl phosphate) substrates. We found that fresh organic matter input drives soil organic matter dynamic. Higher annual input of fresh organic matter resulted in a higher amount of fungal biomass in the POM-fraction and shorter mean residence times. Fungal activity therefore seems essential for the decomposition and incorporation of organic matter input into the soil. As a consequence, limited litter input changed especially the fungal community favouring arbuscular mycorrhizal fungi. Altogether, supply and availability of fresh plant carbon changed the distribution of microbial biomass, the microbial community structure and enzyme activities and resulted in different priming of soil organic matter. Most interestingly we found that only at low input the OMF fraction had significantly higher calculated MRT for Gram-positive and Gram-negative bacteria suggesting high recycling of soil carbon or the use of other carbon sources. But on average all microbial groups had nearly similar carbon uptake rates in all fractions and both soils, which contrasted the turnover times of bulk carbon. Hereby the microbial carbon turnover was always faster than the soil organic carbon turnover and higher carbon input reduced the carbon storage efficiency from 51 % in the low input to 20 %. These findings suggest that microbial community preferentially assimilated fresh carbon sources but also used recycled existing soil carbon. However, the priming rate was drastically reduced under carbon limitation. In consequence at high carbon availability more carbon was respired to activate the existing soil carbon (priming) whereas at low carbon availability new soil carbon was formed at higher efficiencies.

Perennial filter strips reduce nitrate levels in soil and shallow groundwater after grassland-to-cropland conversion

Treesearch

Xiaobo Zhou; Matthew J. Helmers; Heidi Asbjornsen; Randy Kolka; Mark D. Tomer

2010-01-01

Many croplands planted to perennial grasses under the Conservation Reserve Program are being returned to crop production, and with potential consequences for water quality. The objective of this study was to quantify the impact of grassland-to-cropland conversion on nitrate-nitrogen (NO3-N) concentrations in soil and shallow groundwater and to...

Soil communities and plant litter decomposition as influenced by forest debris: Variation across tropical riparian and upland sites.

Treesearch

Honghua Ruana; Yiqing Lib; Xiaoming Zouc

2005-01-01

Forest debris on ground surface can interact with soil biota and consequently change ecosystem processes across heterogeneous landscape. We examined the interactions between forest debris and litter decomposition in riparian and upland sites within a tropical wet forest. Our experiment included control and debris-removal treatments. Debris-removal reduced leaf litter...

Priming alters soil carbon dynamics during forest succession

NASA Astrophysics Data System (ADS)

Qiao, Na; Xu, Xingliang; Wang, Juan; Kuzyakov, Yakov

2017-04-01

The mechanisms underlying soil carbon (C) dynamics during forest succession remain challenged. We examined priming of soil organic matter (SOM) decomposition along a vegetation succession: grassland, young and old-growth forests. Soil C was primed much more strongly in young secondary forest than in grassland or old-growth forest. Priming resulted in large C losses (negative net C balance) in young-forest soil, whereas C stocks increased in grassland and old-growth forest. Microbial composition assessed by phospholipid fatty acids (PLFA) and utilization of easily available organics (13C-PLFA) indicate that fungi were responsible for priming in young-forest soils. Consequently, labile C inputs released by litter decomposition and root exudation determine microbial functional groups that decompose SOM during forest succession. These findings provide novel insights into connections between SOM dynamics and stabilization with microbial functioning during forest succession and show that priming is an important mechanism for contrasting soil C dynamics in young and old-growth forests.

Land-atmosphere coupling and soil moisture memory contribute to long-term agricultural drought

NASA Astrophysics Data System (ADS)

Kumar, S.; Newman, M.; Lawrence, D. M.; Livneh, B.; Lombardozzi, D. L.

2017-12-01

We assessed the contribution of land-atmosphere coupling and soil moisture memory on long-term agricultural droughts in the US. We performed an ensemble of climate model simulations to study soil moisture dynamics under two atmospheric forcing scenarios: active and muted land-atmosphere coupling. Land-atmosphere coupling contributes to a 12% increase and 36% decrease in the decorrelation time scale of soil moisture anomalies in the US Great Plains and the Southwest, respectively. These differences in soil moisture memory affect the length and severity of modeled drought. Consequently, long-term droughts are 10% longer and 3% more severe in the Great Plains, and 15% shorter and 21% less severe in the Southwest. An analysis of Coupled Model Intercomparsion Project phase 5 data shows four fold uncertainty in soil moisture memory across models that strongly affects simulated long-term droughts and is potentially attributable to the differences in soil water storage capacity across models.

Propagules of arbuscular mycorrhizal fungi in a secondary dry forest of Oaxaca, Mexico.

PubMed

Guadarrama, Patricia; Castillo-Argüero, Silvia; Ramos-Zapata, José A; Camargo-Ricalde, Sara L; Alvarez-Sánchez, Javier

2008-03-01

Plant cover loss due to changes in land use promotes a decrease in spore diversity of arbuscular mycorrhizal fungi (AMF), viable mycelium and, therefore, in AMF colonization, this has an influence in community diversity and, as a consequence, in its recovery. To evaluate different AMF propagules, nine plots in a tropical dry forest with secondary vegetation were selected: 0, 1, 7, 10, 14, 18, 22, 25, and 27 years after abandonment in Nizanda, Oaxaca, Mexico. The secondary vegetation with different stages of development is a consequence of slash and burn agriculture, and posterior abandonment. Soil samples (six per plot) were collected and percentage of AMF field colonization, extrarradical mycelium, viable spore density, infectivity and most probable number (MPN) ofAMF propagules were quantified through a bioassay. Means for field colonization ranged between 40% and 70%, mean of total mycelium length was 15.7 +/- 1.88 mg(-1) dry soil, with significant differences between plots; however, more than 40% of extracted mycelium was not viable, between 60 and 456 spores in 100 g of dry soil were recorded, but more than 64% showed some kind of damage. Infectivity values fluctuated between 20% and 50%, while MPN showed a mean value of 85.42 +/- 44.17 propagules (100 g dry soil). We conclude that secondary communities generated by elimination of vegetation with agricultural purposes in a dry forest in Nizanda do not show elimination of propagules, probably as a consequence of the low input agriculture practices in this area, which may encourage natural regeneration.

Correspondence Between Urban Bird Roosts and the Presence of Aerosolised Fungal Pathogens.

PubMed

Irga, Peter J; Armstrong, Brigette; King, William L; Burchett, Margaret; Torpy, Fraser R

2016-10-01

Habitat fragmentation in urban environments concentrates bird populations that have managed to adapt to these newly developed areas. Consequently, the roosts of these birds are potentially creating environments conducive to fungal growth and dissemination. Airborne fungi derived from these environments are relatively unstudied, as is the potential health risk arising from these fungi. This study documented the diversity of culturable airborne fungal propagules associated with forty urban bird roosts. Environmental variables from each site were recorded to allow us to analyse the correspondence between different bird species, the substrate they occupy and airborne fungal propagules. Associations were established between Rhodotorula and Pacific black ducks, wood ducks, myna birds and miner birds when in the presence of bare soil as a substrate. Further associations were established between Penicillium, Scopulariopsis and Cunninghamella and pigeons, sparrows and swallows living in areas with hard surfaces such as bitumen and rocks.

Abiotic and seasonal control of soil-produced CO2 efflux in karstic ecosystems located in Oceanic and Mediterranean climates

NASA Astrophysics Data System (ADS)

Garcia-Anton, Elena; Cuezva, Soledad; Fernandez-Cortes, Angel; Alvarez-Gallego, Miriam; Pla, Concepcion; Benavente, David; Cañaveras, Juan Carlos; Sanchez-Moral, Sergio

2017-09-01

This study characterizes the processes involved in seasonal CO2 exchange between soils and shallow underground systems and explores the contribution of the different biotic and abiotic sources as a function of changing weather conditions. We spatially and temporally investigated five karstic caves across the Iberian Peninsula, which presented different microclimatic, geologic and geomorphologic features. The locations present Mediterranean and Oceanic climates. Spot air sampling of CO2 (g) and δ13CO2 in the caves, soils and outside atmospheric air was periodically conducted. The isotopic ratio of the source contribution enhancing the CO2 concentration was calculated using the Keeling model. We compared the isotopic ratio of the source in the soil (δ13Cs-soil) with that in the soil-underground system (δ13Cs-system). Although the studied field sites have different features, we found common seasonal trends in their values, which suggests a climatic control over the soil air CO2 and the δ13CO2 of the sources of CO2 in the soil (δ13Cs-soil) and the system (δ13Cs-system). The roots respiration and soil organic matter degradation are the main source of CO2 in underground environments, and the inlet of the gas is mainly driven by diffusion and advection. Drier and warmer conditions enhance soil-exterior CO2 interchange, reducing the CO2 concentration and increasing the δ13CO2 of the soil air. Moreover, the isotopic ratio of the source of CO2 in both the soil and the system tends to heavier values throughout the dry and warm season. We conclude that seasonal variations of soil CO2 concentration and its 13C/12C isotopic ratio are mainly regulated by thermo-hygrometric conditions. In cold and wet seasons, the increase of soil moisture reduces soil diffusivity and allows the storage of CO2 in the subsoil. During dry and warm seasons, the evaporation of soil water favours diffusive and advective transport of soil-derived CO2 to the atmosphere. The soil CO2 diffusion is enough important during this season to modify the isotopic ratio of soil produced CO2 (3-6‰ heavier). Drought induces release of CO2 with an isotopic ratio heavier than produced by organic sources. Consequently, climatic conditions drive abiotic processes that turn regulate a seasonal storage of soil-produced CO2 within soil and underground systems. The results here obtained imply that abiotic emissions of soil-produced CO2 must be an inherent consequence of droughts, which intensification has been forecasted at global scale in the next 100 years.

A novel source of biofertilizer from feather biomass for banana cultivation.

PubMed

Gurav, Ranjit G; Jadhav, Jyoti P

2013-07-01

Feather waste is a promising protein biomass available as by-product from poultry processing was found to be rich in peptides, amino acids, and minerals like nitrogen, phosphorus, potassium, calcium, magnesium, iron, manganese, zinc, and copper. Soil and foliar application of these products, besides representing a sustainable solution to the problem of feather disposal, may also represent an effective strategy to tackle the environmental effluence. As a consequence, they were also found to be very attractive in elevating the protein, amino acids, reducing sugar, total chlorophyll, and proline content of plants. On the other side, fertilizing effect enhanced the antioxidant potential of banana fruit which was assessed using 2, 2-diphenyl-1-picrylhydrazyl, ferric reducing/antioxidant power, and N, N-dimethyl-p-phenylendiamine. This was associated with considerably higher antioxidant contents like total phenolics and flavonoids. Therefore, the application of this organic amendment could promote and improve the agro-ecosystem, human health; soil biological activities, and at the same time enhance the production of plant or products rich in bioactive substances.

The geochemistry of mercury in central Amazonian soils developed on the Alter-do-Chão formation of the lower Tapajós River Valley, Pará state, Brazil.

PubMed

Roulet, M; Lucotte, M; Saint-Aubin, A; Tran, S; Rhéault, I; Farella, N; De Jesus Da silva, E; Dezencourt, J; Sousa Passos, C J; Santos Soares, G; Guimarães, J R; Mergler, D; Amorim, M

1998-11-03

In an oxisol-spodosol system developed on the terrestrial surface of the lower Tapajós Valley, the determination of total mercury (Hg), organic carbon (C), iron and aluminum oxy-hydroxide (Fe(cdb) and Al(cdb)) concentrations in the surface soil horizons are used to characterise the geochemical processes controlling the accumulation of Hg in soils under natural vegetation cover and in deforested and cultivated sites. Oxisols from the plateau have homogeneous and relatively high background Hg contents and burdens constituting an important natural reservoir of Hg for the region (90-210 ng/g dry wt. and 19-33 mg/m2 for the first 20 cm). The Fe(cdb) and Al(cdb) contents associated with the fine fraction (< 63 microns) of the soil suggest that oxy-hydroxides and, particularly Al-substituted Fe oxy-hydroxides, control the Hg concentrations observed in all of the soils of the study region. Consequently, the geochemistry of these minerals along the slopes governs the accumulation or the release of the Hg according to the natural evolution of the soil cover and/or following the degradation of soils by erosion after deforestation and cultivation. These observations have important implications for the interpretation of Hg contamination patterns observed in Amazonian aquatic systems that could be linked to different drainage sources of Hg from the terrestrial surface. The sandification and podzolisation that is characteristic of the evolution of numerous pedological systems in the equatorial Amazon could be responsible for exportation of the naturally accumulated Hg, as for other metals, by acidic complexation and migration to the black waters of the Amazon. In the central Amazon region, as a result of the fragility of the soil cover, deforestation and cultivation, affecting principally the superficial soil, promote the selective erosion of fine particles enriched in oxides and Hg. The erosion of soil could be responsible for an important release of Hg, transported in particulate form by drainage waters.

Decoupling of lignin and total litter decomposition across North American forest soils: a phenomenon to reconcile old and new paradigms of soil organic matter?

NASA Astrophysics Data System (ADS)

Hall, S. J.; Hammel, K.

2017-12-01

An "old" paradigm of soil organic matter (SOM) posited that biochemically "recalcitrant" lignin derivatives were a dominant constituent. Over the past decade(s), evidence for a newer paradigm has emerged which suggests that recalcitrance has little long-term impact on the biochemical composition of SOM, and that lignin is relatively unimportant in comparison with dead microbial biomass. Yet, methodological biases have hampered accurate quantification of lignin dynamics in mineral soils, and may have led to systematic underestimates of lignin stocks and turnover. Here, we sought to test this aspect of the "new" SOM paradigm. Synthetic position-specific 13C-labeled lignins provide a robust quantitative method to track the mineralization and fate of lignin moieties in mineral soils. Relatively few microbial taxa are known to depolymerize macromolecular lignin, and lignin derivatives can specifically associate with iron oxide mineral phases. Consequently, we hypothesized that decomposition of lignin is poorly correlated with total litter decomposition across ecosystems, and that lignin may represent a variable but significant component of decadal-cycling SOM. We incubated 10 forest soils spanning diverse North American ecosystems over seven months under laboratory conditions at constant temperature and moisture. Soils were incubated alone, with added C4 grass litter and natural isotope abundance lignin, and with added C4 litter and 13Cß-labeled lignin. These treatments allowed us to partition respiration for each soil from SOM, litter, and the Cß moiety of lignin—which is diagnostic for cleavage of the polymer. Consistent with our hypothesis, we found much greater variability (ten-fold) in cumulative lignin mineralization relative to bulk litter (two-fold) among soils. Multiple-pool first-order decay models implied that mean turnover times for lignin ranged from one to several decades among soils, relative to several years for bulk litter. Our results suggest a potential resolution for old and new paradigms of SOM: lignin may represent a variably important component of decadal-cycling SOM, in concert with potentially predictable variation in lignin-degrading microbes and geochemical composition.

How mycorrhizal plant-soil interactions affect formation and degradation of soil organic matter in boreal forest

NASA Astrophysics Data System (ADS)

Adamczyk, Bartosz; Sietiö, Outi-Maaria; Ahvenainen, Anu; Strakova, Petra; Heinonsalo, Jussi

2017-04-01

Forest soil organic matter (SOM) contains more carbon (C) than all the flora and atmosphere combined and that is why C release as CO2 from SOM may have drastic consequences for climate globally. SOM is enormous C sink which has the potential to become C source (IPCC 2013). To predict long-term soil C storage and climate feedbacks we need profound understanding of dynamics and drivers of SOM decomposition. Ecosystem processes associated with C cycle are constrained by C and N interactions. At the level of ecosystem boreal forest is N-limited, as most of soil N is stored in recalcitrant organic form bound or complexed with soil compounds such as polyphenols. To improve N uptake, also from less available pools, plant species form symbioses with mycorrhizal fungi able to degrade recalcitrant N and sharing it with plants. As a feedback, plants provide to fungal symbiont assimilated C. Climate change through elevated CO2 level led to increases in photosynthesis which enhance the C flow belowground accelerating N uptake by plants also from more recalcitrant N pools. Increased SOM decomposition would possibly result also in increase of CO2 production from soil. Our field experiment was conducted at Hyytiälä forestry field station (SMEAR II, University of Helsinki) located in southern Finland (61°84'N, 24°26'E). In this 3-year long experiment, we discriminated SOM decomposition with different mesh bags filled with humus. These mesh bags allowed for the entrance of mycorrhiza and fine roots (1mm mesh size), or only mycorrhiza (50µm), or both were excluded (1µm). We followed changes in SOM content, N pools and enzymatic activity. The results suggests that plant-mycorrhiza interactions increase recalcitrant pool of organic N in SOM due to root-derived tannins, but mycorrhizal plants have still access to this N. Although mycorrhizal plant-soil interaction seems to strongly affect the formation of recalcitrant SOM, the net decomposition is not hindered by these chemical changes. This study underline that plant-soil feedbacks and especially soil chemistry behind this interaction are decisive factors for estimating changes in SOM decomposition rate.

Intensive soil organic carbon losses by degradation of alpine Kobresia pasture on the Tibetan Plateau

NASA Astrophysics Data System (ADS)

Schleuss, Per-Marten; Heitkamp, Felix; Seeber, Elke; Spielvogel, Sandra; Miehe, Georg; Guggenberger, Georg; Kuzyakov, Yakov

2015-04-01

Kobresia grasslands of the Tibetan Plateau cover an area of ca. 450,000 km2. They are of high global and regional importance as they store large amounts of carbon (C) and nitrogen (N) and provide food for grazing animals. However, intensive grassland degradation in recent decades destroyed mainly the upper root-mat/soil horizon. This has dramatic consequences for SOC storage against the background of climate change and further grazing pressure. We investigated the impact of pasture degradation on SOC storage and hypothesized that SOC stocks strongly decreased due to a reduction of C-input by roots as consequence of vegetation cover loss by overgrazing, SOM decomposition and soil erosion. We selected a sequence of six degradation stages (DS1-6). As initial trigger of grassland degradation, the high grazing pressure reduces the ability of Kobresia pastures to recover from disturbances (e.g. by freezing and drying events, herbivory, trampling). Once the root mats are destroyed, the occurring root-mat cracks increase due to soil erosion, SOC decomposition and trampling activities of livestock. The SOC stocks and contents decreased along the degradation sequence from intact to highly disturbed stages. Carbon stocks declined from intact Kobresia root mats (DS1) to bare soil patches (DS6) by about 70%. The thickness of the upper soil horizons strongly declined from DS1 to DS6. Considering the bare soil patches (DS6) on average 10 cm of the most fertile topsoil were removed. This clearly suggests that soil erosion strongly contributed to SOC losses, especially from topsoil with highest SOC contents. A strong decrease of the vegetation cover (mainly K. pygmaea) demonstrated that soil degradation also resulted in die-back of K. pygmaea. Consequently, root biomass decreased along the degradation sequence (DS1-2 > DS3-4 > DS5-6), indicating lower belowground C input from roots. We found decreasing δ13C values with increasing degradation stages within the upper 20 cm of soil. Higher δ13C values were found for intact root mats (DS1), whereas lowest δ13C signatures occurred for the highly degraded stages (DS5-6). This observation seems to be unusual, because δ13C values are supposed to increase with increasing decomposition. However, the δ13C signatures agreed well with lignin contents, which increased along the degradation sequence. Since lignin is 13C depleted, the δ13C shift clearly indicates SOM decomposition and relative enrichment of lignin components. Using root biomass as indicator for C- input and δ13C values for SOM decomposition, we could explain 70% of decreasing SOC contents using a multiple linear regression model. We conclude that grassland and soil degradation led to large SOC loss due an absence of root C-input, SOM decomposition and soil erosion.

Influence of biochar on the enantioselective behavior of the chiral fungicide metalaxyl in soil

NASA Astrophysics Data System (ADS)

Gámiz, Beatriz; Pignatello, Joseph J.; Hermosín, María Carmen; Cox, Lucía; Celis, Rafael

2015-04-01

Chiral pesticides comprise an emerging and important class of organic pollutants currently, accounting for more than a quarter of used pesticides. Consequently, the contamination problems caused by chiral pesticides are concern matter and factors affecting enantioselective processes of chiral pesticides in soil need to be understood. For example, certain soil management practices, such as the use of organic amendments, can affect the enantioselective behavior of chiral pesticides in soils. Recently, biochar (BC), i.e. organic matter subjected to pyrolysis, has been proposed as organic amendment due to beneficial properties such as its high stability against decay in soil environments and its apparent ability to influence the availability of nutrients. BC is considered to be more biologically inert as compared to otherforms of organic carbon. However, its side-effects on the enantioselectivity of processes affecting the fate of chiral pesticides is unknown. The aim of this study was to assess the effect of biochar (BC) on the enantioselectivity of sorption, degradation, and leaching of the chiral fungicide metalaxyl in an agricultural soil. Amending the soil with BC (2% w/w) resulted in 3 times higher sorption of metalaxyl enantiomers compared to unamended soil, but no enantioselectivity in the process was observed. Moreover, both enantiomers showed some resistance to be desorbed in BC-amended soil compared to unamended soil. Dissipation studies revealed that the degradation of metalaxylwas more enantioselective in the unamended soil than in BC-amended soil. In unamended soil, R-metalaxyl(biologically active) and S- metalaxyl had half-lives (t1/2) of 3 and 34 days, respectively. BC enhanced the persistence of both enantiomers in the soil, with R-metalaxyl being degraded faster (t1/2=43 days) than S-metalaxyl (t1/2= 100 days). The leaching of both S-and R-metalaxyl was almost suppressed after amending the soil with BC; less than 10% of the fungicide applied to soil columns was recovered in leachates, in contrast to significantly higher percentages leachedin unamended soil, being the process more enantioselective in the latter case. Finally, total recoveries of both enantiomers were greater for BC-amended soil columns than for unamended soil columns, indicating reduced degradation in BC- amended soil. Our findings illustrated the ability of biochar to modify the enantioselectivity behavior of metalaxyl in soil by its high sorption capacity. BC could contribute to reduce the current agronomic doses used for chiral pesticides to deplete the contamination problems associated with their use, and also to act as an immobilizing amendment in soil remediation strategies. Acknowledgments: MINECO (AGL2011-23779), FACCE-JPI (Designchar4food), JA (AGR-264) and FEDER-FSE (OP 2007-2013).

Radiocarbon constraints imply reduced carbon uptake by soils during the 21st century

USGS Publications Warehouse

He, Yujie; Trumbore, Susan E.; Torn, Margaret S.; Harden, Jennifer W.; Vaughn, Lydia J.S.; Allison, Steven D.; Randerson, J.T.

2016-01-01

Soil is the largest terrestrial carbon reservoir and may influence the sign and magnitude of carbon cycle-climate feedbacks. Many Earth system models (ESMs) estimate a significant soil carbon sink by 2100, yet the underlying carbon dynamics determining this response have not been systematically tested against observations. We used 14C data from 157 globally distributed soil profiles sampled to 1 m depth to show that ESMs underestimated the mean age of soil carbon by more than six-fold (430±50 years vs. 3100±1800 years). Consequently, ESMs overestimated the carbon sequestration potential of soils by nearly two-fold (40±27%). These biases suggest that ESMs must better represent carbon stabilization processes and the turnover time of slow and passive reservoirs when simulating future atmospheric CO2 dynamics.

Evaluation of the genotoxic potential of soil contaminated with mineral coal tailings on snail Helix aspersa.

PubMed

de Souza, Melissa Rosa; da Silva, Fernanda Rabaioli; de Souza, Claudia Telles; Niekraszewicz, Liana; Dias, Johnny Ferraz; Premoli, Suziane; Corrêa, Dione Silva; Soares, Mariana do Couto; Marroni, Norma Possa; Morgam-Martins, Maria Isabel; da Silva, Juliana

2015-11-01

Coal remains an important source of energy, although the fuel is a greater environmental pollutant. Coal is a mixture of several chemicals, especially inorganic elements and polycyclic aromatic hydrocarbons (PAH). Many of these compounds have mutagenic and carcinogenic effects on organisms exposed to this mineral. In the town of Charqueadas (Brazil), the tailings from mining were used for landfill in the lower areas of the town, and the consequence is the formation of large deposits of this material. The purpose of this study was to evaluate the genotoxic potential of soil samples contaminated by coal waste in different sites at Charqueadas, using the land snail Helix aspersa as a biomonitor organism. Thirty terrestrial snails were exposed to different treatments: 20 were exposed to the soil from two different sites in Charqueadas (site 1 and 2; 10 in each group) and 10 non-exposed (control group). Hemolymph cells were collected after 24h, 5days and 7days of exposure and comet assay, micronucleus test, oxidative stress tests were performed. Furthermore, this study quantified the inorganic elements present in soil samples by the PIXE technique and polycyclic aromatic hydrocarbons (PAH) by HPLC. This evaluation shows that, in general, soils from sites in Charqueadas, demonstrated a genotoxic effect associated with increased oxidative stress, inorganic and PAH content. These results demonstrate that the coal pyrite tailings from Charqueadas are potentially genotoxic and that H. aspersa is confirmed to be a sensitive instrument for risk assessment of environmental pollution. Copyright © 2015 Elsevier Ltd. All rights reserved.

Environmental Assessment of Short-Term Construction Projects at the 150th Fighter Wing, New Mexico Air National Guard, Kirtland Air Force Base, New Mexico

DTIC Science & Technology

2003-01-01

level scs Soil Conservation Service DOD Department of Defense SF square foot DOPAA Description of the Proposed SHPO State Historic Preservation...relatively level and most of the area has already been developed. Consequently, most surface soils have been previously disturbed or paved over. Surface... soils arc well drained sands and lo<\\ffiS with slight to moderate hazard of wind and water erosion. As a tenant organization. Nl’vtANG is required to

State of the Science Review: Potential for Beneficial Use of ...

EPA Pesticide Factsheets

Metal and metalloid contamination of soil and sediment is a widespread problem both in urban and rural areas throughout the United States (U.S. EPA, 2014). Beneficial use of waste by-products as amendments to remediate metal-contaminated soils and sediments can provide major economic and environmental advantages on both a site-specific and national scale. These waste by-products can also reduce our need to mine virgin materials or produce synthetic materials for amendments. Waste by-products must not be hazardous or pose unacceptable risk to human health and the environment, and should be a suitable replacement for virgin and synthetic materials. This review serves to present the state of science on in-situ remediation of metal-contaminated soil and sediment and the potential for beneficial usage of waste by-product materials. Not all unintended consequences can be fully understood or predicted prior to implementing a treatment option, however some realized, and potentially unrealized, benefits and unintended consequences are explored. The objectives of this review article are to: (1) summarize the current state of the science on in-situ treatment of metal-contaminated soils and sediments; (2) review the more recent use of non-municipal and non-hazardous waste by-products for use as soil and sediment amendments; and (3) identify physical and chemical properties that are indicative of the success or effectiveness of using a specific amendment to treat metal

Can Fertilization of Soil Select Less Mutualistic Mycorrhizae?

PubMed

Johnson, Nancy Collins

1993-11-01

It has been noted previously that nutrient-stressed plants generally release more soluble carbohydrate in root exudates and consequently support more mycorrhizae than plants supplied with ample nutrients. Fertilization may select strains of vesicular-arbuscular mycorrhizal (VAM) fungi that are inferior mutualists if the same characteristics that make a VAM fungus successful in roots with a lowered carbohydrate content also reduce the benefits that the fungus provides a host plant. This two-phase study experimentally tests the hypothesis that fertilizing low-nutrient soil selects VAM fungi that are inferior mutualists. The first phase examines the effects of chemical fertilizers on the species composition of VAM fungal communities in long-term field plots. The second phase measures the effects of VAM fungal assemblages from fertilized and unfertilized plots on big bluestem grass grown in a greenhouse. The field results indicate that 8 yr of fertilization altered the species composition of VAM fungal communities. Relative abundance of Gigaspora gigantea, Gigaspora margarita, Scutellispora calospora, and Glomus occultum decreased while Glomus intraradix increased in response to fertilization. Results from the greenhouse experiment show that big bluestem colonized with VAM fungi from fertilized soil were smaller after 1 mo and produced fewer inflorescences at 3 mo than big bluestem colonized with VAM fungi from unfertilized soil. Fungal structures within big bluestem roots suggest that VAM fungi from fertilized soil exerted a higher net carbon cost on their host than VAM fungi from unfertilized soil. VAM fungi from fertilized soil produced fewer hyphae and arbuscules (and consequently provided their host with less inorganic nutrients from the soil) and produced as many vesicles (and thus provisioned their own storage structures at the same level) as fungi from unfertilized soil. These results support the hypothesis that fertilization selects VAM fungi that are inferior mutualists. © 1993 by the Ecological Society of America.

Impact of vegetation on stability of slopes subjected to rainfall - numerical aspect

NASA Astrophysics Data System (ADS)

Switala, Barbara Maria; Tamagnini, Roberto; Sudan Acharya, Madhu; Wu, Wei

2015-04-01

Recent years brought a significant development of soil bioengineering methods, considered as an ecological and economically effective measure for slope stabilization. This work aims to show the advantages of the soil bioengineering solutions for a slope subjected to a heavy rainfall, with the help of a numerical model, which integrates most of the significant plant and slope features. There are basically two different ways in which vegetation can affect stability of a slope: root reinforcement (mechanical impact) and root water uptake (evapotranspiration). In the numerical model, the first factor is modelled using the Cam-Clay model extended for unsaturated conditions by Tamagnini (2004). The original formulation of a constitutive model is modified by introducing an additional constitutive parameter, which causes an expansion of the yield surface as a consequence of an increase in root mass in a representative soil element. The second factor is the root water uptake, which is defined as a volumetric sink term in the continuity equation of groundwater flow. Water removal from the soil mass causes an increase in suction in the vicinity of the root zone, which leads to an increase in the soil cohesion and provides additional strength to the soil-root composite. The developed numerical model takes into account the above mentioned effects of plants and thus considers the multi-phase nature of the soil-plant-water relationship. Using the developed method, stability of some vegetated and non-vegetated slopes subjected to rainfall are investigated. The performance of each slope is evaluated by the time at which slope failure occurs. Different slope geometries and soil mechanical and hydrological properties are considered. Comparison of the results obtained from the analyses of vegetated and non-vegetated slopes leads to the conclusion, that the use of soil bioengineering methods for slope stabilization can be effective and can significantly delay the occurrence of a rainfall induced landslide. On the contrary, vegetation removal can have serious consequences, especially on steep and forested slopes.

Utilising Structure-From-Motion Approaches to Develop a Spatial Understanding of Soil Erosion Processes, in an Experimental Setting.

NASA Astrophysics Data System (ADS)

Benaud, P.; Anderson, K.; Quine, T. A.; James, M. R.; Quinton, J.; Brazier, R. E.

2016-12-01

While total sediment capture can accurately quantify soil loss via water erosion, it isn't practical at the field scale and provides little information on the spatial nature of soil erosion processes. Consequently, high-resolution, remote sensing, point cloud data provide an alternative method for quantifying soil loss. The accessibility of Structure-from-Motion Multi-Stereo View (SfM) and the potential for multi-temporal applications, offers an exciting opportunity to spatially quantify soil erosion. Accordingly, published research provides examples of the successful quantification of large erosion features and events, to centimetre accuracy. Through rigorous control of the camera and image network geometry, the centimetre accuracy achievable at the field scale, can translate to sub-millimetre accuracies within a laboratory environment. Accordingly, this study looks to understand how the ultra-high-resolution spatial information on soil surface topography, derived from SfM, can be integrated with a multi-element sediment tracer to develop a mechanistic understanding of rill and inter-rill erosion, under experimental conditions. A rainfall simulator was used to create three soil surface conditions; compaction and rainsplash, inter-rill erosion, and rill erosion, at two experimental scales (0.15 m2 and 3 m2). Total sediment capture was the primary validation for the experiments, allowing the comparison between structurally and volumetrically derived change, and true soil loss. A Terrestrial Laser Scanner (resolution of ca. 0.8mm) has been employed to assess spatial discrepancies within the SfM data sets and to provide an alternative measure of volumetric change. Preliminary results show the SfM approach used can achieve a ground resolution of less than 0.2 mm per pixel, and a RMSE of less than 0.3 mm. Consequently, it is expected that the ultra-high-resolution SfM point clouds can be utilised to provide a detailed assessment of soil loss via water erosion processes.

Analysis of physical parameters related with water infiltration in tropical soils located in edges forest in urban areas

NASA Astrophysics Data System (ADS)

Márcia Longo, Regina; Cunha, Jessica C. M.; Lammoglia, Rafaella; Mendes, Deborah R.; Mungilioli, Sarah S.; Damame, Desiree B.; Demamboro, Antônio C.; Bettine, Sueli C.; Ribeiro, Admilson I.; Fengler, Felipe H.

2015-04-01

A very important factor for water infiltration into the soil in urban forest systems and suffering constant anthropogenic pressures is the analysis of soil compaction where these forests are or will be established. In this context, this work aimed to promote studies on physical parameters related to distribution of pores, compaction and soil biological activity in forest remnants border areas located in urban watersheds in Campinas / SP - Brazil. The Forest of Santa Genebra (22°49'45 "S and 47°06'33" W) has an average altitude of 680m and tropical climate of altitude, has an area of 251 ha and a nine kilometer perimeter. It constitutes 85% of Semideciduos forests and 15% swamp forest. Due to its location close to urban centers, roads and agricultural areas under direct influence of the anthropic means. For the present study analyzes were performed: particle size, soil density, porosity, matters organic, of biopores, and root distribution (primary, secondary and tertiary) and seedlings in 40 points on the perimeter of the forest equidistant 200m remaining edge. The analysis of the results allowed us to observe that areas suffer direct influence of human activities surrounding. With the results set correlations between the different parameters in order to allow a better understanding of the dynamics of water infiltration into the soil under these conditions and the quantity of tertiary roots, biopores and soil density were the best indicator of environmental quality as suffer direct influence of the surrounding areas, especially those near the most urbanized regions. In general, it can be observed that human activities such as deforestation and vehicle traffic, animals and people, promoted soil compaction and consequent changes in water infiltration into the soil in areas of edges of this remnant of these consequences affect direct numerous parameters that directly influence the dynamics of an ecosystem restoration that is now significantly affected by the occupation of their surroundings.

[Distribution characteristics of soil nematodes in reclaimed land of copper-mine-tailings in different plant associations].

PubMed

Zhu, Yong-heng; Li, Ke-zhong; Zhang, Heng; Han, Fei; Zhou, Ju-hua; Gao, Ting-ting

2015-02-01

A survey was carried out to investigate soil nematode communities in the plant associations of gramineae (Arthraxon lanceolatus, AL; Imperata cylindrica, IC) and leguminosae (Glycine soja, GS) in reclaimed land of copper-mine-tailings and in the plant associations of gramineae (Digitaria chrysoblephara, DC-CK) of peripheral control in Fenghuang Mountain, Tongling City. A total of 1277 nematodes were extracted and sorted into 51 genera. The average individual density of the nematodes was 590 individuals · 100 g(-1) dry soil. In order to analyze the distribution character- istics of soil nematode communities in reclaimed land of copper-mine-tailings, Shannon community diversity index and soil food web structure indices were applied in the research. The results showed that the total number of nematode genus and the Shannon community diversity index of soil nematode in the three plant associations of AL, IC and GS were less than that in the plant associations of DC-CK. Compared with the ecological indices of soil nematode communities among the different plant associations in reclaimed land of copper-mine-tailings and peripheral natural habitat, we found that the structure of soil food web in the plant associations of GS was more mature, with bacterial decomposition being dominant in the soil organic matter decomposition, and that the soil ecosystem in the plant associations of GS was not stable with low interference. This indicated that the soil food web in the plant associations of leguminosae had a greater development potential to improve the ecological stability of the reclaimed land of copper-mine-tailings. On the other hand, the structure of soil food web in the plant associations of AL and IC were relatively stable in a structured state with fungal decomposition being dominant in the decomposition of soil organic matter. This indicated that the soil food web in the plant associations of gramineae was at a poor development level.

Delineation of major soil associations using ERTS-1 imagery

NASA Technical Reports Server (NTRS)

Parks, W. L.; Bodenheimer, R. E.

1973-01-01

The delineation of a major soil association in the loess region of Obion County has been accomplished using ERTS-1 imagery. Channel 7 provides the clearest differentiation. The separation of other smaller soil associations in an intensive row crop agricultural area is somewhat more difficult. Soil differentiation has been accomplished visually as well as electronically using a scanning microdensitometer. Lower altitude aircraft imagery permits a more refined soil association identification and where imagery is of sufficient scale, even individual soils may be identified.

Mobilization of hydrophobic contaminants from soils by enzymatic depolymerization of soil organic matter.

PubMed

Wicke, Daniel; Reemtsma, Thorsten

2010-02-01

The effect of hydrolytic exoenzymes on the release of hydrophobic organic contaminants (HOC) from two different surface soils was studied in laboratory batch experiments. Incubation of the soils with cellulase with an activity fivefold above the inherent soil activity enhanced the release of hydrophobic contaminants (polycyclic aromatic hydrocarbons (PAH), polychlorinated biphenyls (PCB) and hydroxylated PCB) by 40-200%. Xylanase and invertase did not show measurable effects at comparable relative activity levels. This suggests that cellulose substructures are important for the retention of HOC in soil organic matter (SOM). Hydrolytic exoenzymes, and the microorganisms that release them, contribute to the mobilization of HOC from soil, by shifting the sorption equilibrium in the course of SOM transformation into dissolved organic matter or by facilitating HOC diffusion as a consequence of reduced rigidity of SOM. We conclude that not only biodegradation but also sorption and desorption of HOC in soil can be influenced by (micro-) biology and the factors that determine its activity.

Uptake and elimination kinetics of metals in soil invertebrates: a review.

PubMed

Ardestani, Masoud M; van Straalen, Nico M; van Gestel, Cornelis A M

2014-10-01

Uptake and elimination kinetics of metals in soil invertebrates are a function of both soil and organism properties. This study critically reviewed metal toxicokinetics in soil invertebrates and its potential use for assessing bioavailability. Uptake and elimination rate constants of different metals are summarized. Invertebrates have different strategies for essential and non-essential metals. As a consequence, different types of models must be applied to describe metal uptake and elimination kinetics. We discuss model parameters for each metal separately and show how they are influenced by exposure concentrations and by physiological properties of the organisms. Soil pH, cation exchange capacity, clay and organic matter content significantly affect uptake rates of non-essential metals in soil invertebrates. For essential metals, kinetics is hardly influenced by soil properties, but rather prone to physiological regulation mechanisms of the organisms. Our analysis illustrates that toxicokinetics can be a valuable measurement to assess bioavailability of soil-bound metals. Copyright © 2014 Elsevier Ltd. All rights reserved.

Moisture and temperature controls on nitrification differ among ammonia oxidizer communities from three alpine soil habitats

USGS Publications Warehouse

Osborne, Brooke B.; Baron, Jill S.; Wallenstein, Matthew D.

2016-01-01

Climate change is altering the timing and magnitude of biogeochemical fluxes in many high elevation ecosystems. The consequent changes in alpine nitrification rates have the potential to influence ecosystem scale responses. In order to better understand how changing temperature and moisture conditions may influence ammonia oxidizers and nitrification activity, we conducted laboratory incubations on soils collected in a Colorado watershed from three alpine habitats (glacial outwash, talus, and meadow). We found that bacteria, not archaea, dominated all ammonia oxidizer communities. Nitrification increased with moisture in all soils and under all temperature treatments. However, temperature was not correlated with nitrification rates in all soils. Site-specific temperature trends suggest the development of generalist ammonia oxidizer communities in soils with greater in situ temperature fluctuations and specialists in soils with more steady temperature regimes. Rapidly increasing temperatures and changing soil moisture conditions could explain recent observations of increased nitrate production in some alpine soils.

ERTS-1 MSS imagery: Its use in delineating soil associations and as a base map for publishing soils information. [South Dakota

NASA Technical Reports Server (NTRS)

Westin, F. C.

1974-01-01

ERTS 1 imagery is a useful tool in the identification and refinement of soil association areas and an excellent base map upon which soil association information can be published. Prints of bands 5 and 7 were found to be most useful to help delineate major soil and vegetation areas. After delineating major soil areas, over 4800 land sale prices covering a period of 1967-72 were located in the soil areas and averaged. The soil association then were described as soil association value areas and published on a 1:1,000,000 scale ERTS mosaic of South Dakota constructed using negative prints of band 7. The map is intended for use by state and county revenue officers, by individual buyers and sellers of land and lending institutions, and as a reference map by those planning road routes and cable lines and pipelines.

Long-term effects of silviculture on soil carbon storage: does vegetation control make a difference?

Treesearch

Robert F. Powers; Matt D. Busse; Karis J. McFarlane; Jianwei Zhang; David H. Young

2012-01-01

Forests and the soils beneath them are Earth’s largest terrestrial sinks for atmospheric carbon (C) and healthy forests provide a partial check against atmospheric rises in CO2. Consequently, there is global interest in crediting forest managers who enhance C retention. Interest centres on C acquisition and storage in trees. Less is directed to...

Size- and composition-dependent toxicity of synthetic and soil-derived Fe oxide colloids for the nematode Caenorhabditis elegans.

PubMed

Höss, Sebastian; Fritzsche, Andreas; Meyer, Carolin; Bosch, Julian; Meckenstock, Rainer U; Totsche, Kai Uwe

2015-01-06

Colloidal iron oxides (FeOx) are increasingly released to the environment due to their use in environmental remediation and biomedical applications, potentially harming living organisms. Size and composition could affect the bioavailability and toxicity of such colloids. Therefore, we investigated the toxicity of selected FeOx with variable aggregate size and variably composed FeOx-associated organic matter (OM) toward the nematode Caenorhabditis elegans. Ferrihydrite colloids containing citrate were taken up by C. elegans with the food and accumulated inside their body. The toxicity of ferrihydrite, goethite, and akaganeite was dependent on aggregate size and specific surface area, with EC50 values for reproduction ranging from 4 to 29 mg Fe L(-1). Experiments with mutant strains lacking mitochondrial superoxide dismutase (sod-2) showed oxidative stress for two FeOx and Fe(3+)-ions, however, revealed that it was not the predominant mechanism of toxicity. The OM composition determined the toxicity of mixed OM-FeOx phases on C. elegans. FeOx associated with humic acids or citrate were less toxic than OM-free FeOx. In contrast, soil-derived ferrihydrite, containing proteins and polysaccharides from mobile OM, was even more toxic than OM-free Fh of similar aggregate size. Consequently, the careful choice of the type of FeOx and the type of associated OM may help in reducing the ecological risks if actively applied to the subsurface.

Studying and understanding the environmental impacts of the Three Gorges Dam in China

NASA Astrophysics Data System (ADS)

Schönbrodt-Stitt, Sarah; Stumpf, Felix; Schmidt, Karsten; Althaus, Paul; Bi, Renneng; Bieger, Katrin; Buzzo, Giovanni; Dumperth, Christian; Fohrer, Nicola; Rohn, Joachim; Strehmel, Alexander; Udelhoven, Thomas; Wei, Xiang; Zimmermann, Karsten; Scholten, Thomas

2013-04-01

Since its planning phase and its completion and start of operation in 2009, the Three Gorges Dam (TGD) at the Yangtze River, has been discussed in a controversial manner. Due to considerable resettlements along with the associated expansion of the infrastructure network and large-scale shifts in land use and management, the TGD in Central China is among the most prominent human-induced examples for large-scale environmental impacts. As a consequence of the rapid ecosystem changes, the region is largely characterized by an enormous boost of typical geo-risks such as soil erosion, mass movements, and diffuse sediment and matter fluxes into the reservoir. Within the joint research project YANGTZE-GEO, Chinese and German scientists jointly focus on the human-induced environmental changes in the reservoir of the TGD after the impoundment of the Yangtze River and its tributaries. An integrative approach was set up in order to combine multi-scale investigation methods and state-of-the-art techniques from soil science, geology, hydrology, geophysics, geodesy, remote sensing, and data survey and monitoring. By means of eco-hydrological and soil erosion modeling, geo-statistical approaches such as digital soil mapping and Artificial Neuronal Networks, spatially and temporally differentiated simulation of the water budget as well as the balance of diffuse matter such as phosphorus and sediment, three-dimensional dynamic modeling, seismoacoustics and terrestrial radarinterferometry, multi-temporal land use classification from recent and historical remote sensing data and laser scanning, the research aims at (i) the understanding of the mechanisms and anthropogenic and environmental control factors of the environmental changes in the highly dynamic region and (ii) the development of spatially explicit land use options and recommendations for a sustainable land use management. Finally, based on the integrate modelling, we aim at the conception of a monitoring- and measuring network and early-warning system including local and regional authorities. Thus, the studies will contribute to a better understanding of the dimensions and dynamics of the ecological consequences of such large dam projects at the Yangtze River and worldwide.

[Effects of Cultivation Soil Properties on the Transport of Genetically Engineered Microorganism in Huabei Plain].

PubMed

Zhang, Jing; Liu, Ping; Liu, Chun; Chen, Xiao-xuan; Zhang, Lei

2015-12-01

The transport of genetically engineered microorganism (GEM) in the soil is considered to be the important factor influencing the enhanced bioremediation of polluted soil. The transport of an atrazine-degrading GEM and its influencing factors were investigated in the saturated cultivation soil of Huabei Plain. The results showed that horizontal infiltration was the main mechanism of GEM transport in the saturated cultivation soil. The transport process could be simulated using the filtration model. Soil properties showed significant effects on pore water flow and GEM transport in saturated soil. When particle size, porosity and sand component of the soil increased, the hydraulic conductivity constant increased and filtration coefficient of GEM decreased in saturated soil, indicating the reduced retention of GEM in the soil. An increase in infiltration flow also increased hydraulic conductivity constant in saturated soil and consequently decreased filtration coefficient of GEM. When hydraulic conductivity constants ranged from 5.02 m · d⁻¹ to 6.70 m · d⁻¹ in the saturated soil, the filtration coefficients of GEM varied from 0.105 to 0.274. There was a significantly negative correlation between them.

CO2 leakage-induced vegetation decline is primarily driven by decreased soil O2.

PubMed

Zhang, Xueyan; Ma, Xin; Zhao, Zhi; Wu, Yang; Li, Yue

2016-04-15

To assess the potential risks of carbon capture and storage (CCS), studies have focused on vegetation decline caused by leaking CO2. Excess soil CO2 caused by leakage can affect soil O2 concentrations and soil pH, but how these two factors affect plant development remains poorly understood. This hinders the selection of appropriate species to mitigate potential negative consequences of CCS. Through pot experiments, we simulated CO2 leakage to examine its effects on soil pH and soil O2 concentrations. We subsequently assessed how maize growth responded to these changes in soil pH and O2. Decreased soil O2 concentrations significantly reduced maize biomass, and explained 69% of the biomass variation under CO2 leakage conditions. In contrast, although leaked CO2 changed soil pH significantly (from 7.32 to 6.75), it remained within the optimum soil pH range for maize growth. This suggests that soil O2 concentration, not soil pH, influences plant growth in these conditions. Therefore, in case of potential CO2 leakage risks, hypoxia-tolerant species should be chosen to improve plant survival, growth, and yield. Copyright © 2016 Elsevier Ltd. All rights reserved.

Risk assessment of an abandoned pyrite mine in Spain based on direct toxicity assays.

PubMed

García-Gómez, Concepción; Sánchez-Pardo, Beatriz; Esteban, Elvira; Peñalosa, Jesús Manuel; Fernández, María Dolores

2014-02-01

This research reports the risk assessment of an abandoned pyrite mine using direct toxicity assays of soil and groundwater samples taken at the site. The toxicity of As and heavy metals from mining soils to soil and aquatic organisms was studied using the Multispecies Soil System (MS-3) in soil columns. Ecotoxicological assessment was performed with soil samples diluted with a control soil at concentrations of 12.5, 25, 50 and 100% test soil/soil (w/w). In this way, changes in the mobility and bioavailability of soil contaminants due to changes in geochemical soil properties via soil dilution were studied. The toxicity of water samples was tested on algae and Daphnia magna. The assessment of the mining area indicated that the current presence of As and heavy metals at the site may cause injuries to soil and aquatic organisms in the entire research area. Moreover, this investigation demonstrated that changes in geochemical conditions can increase the availability of arsenic and, consequently, the environmental risk of these soils. A good correlation was not found between toxicity parameters and the concentrations of soil contaminants based on total and extracted element concentrations. This finding reinforces the usefulness of direct toxicity assays for evaluating environmental risk. © 2013.

[Bare Soil Moisture Inversion Model Based on Visible-Shortwave Infrared Reflectance].

PubMed

Zheng, Xiao-po; Sun, Yue-jun; Qin, Qi-ming; Ren, Hua-zhong; Gao, Zhong-ling; Wu, Ling; Meng, Qing-ye; Wang, Jin-liang; Wang, Jian-hua

2015-08-01

Soil is the loose solum of land surface that can support plants. It consists of minerals, organics, atmosphere, moisture, microbes, et al. Among its complex compositions, soil moisture varies greatly. Therefore, the fast and accurate inversion of soil moisture by using remote sensing is very crucial. In order to reduce the influence of soil type on the retrieval of soil moisture, this paper proposed a normalized spectral slope and absorption index named NSSAI to estimate soil moisture. The modeling of the new index contains several key steps: Firstly, soil samples with different moisture level were artificially prepared, and soil reflectance spectra was consequently measured using spectroradiometer produced by ASD Company. Secondly, the moisture absorption spectral feature located at shortwave wavelengths and the spectral slope of visible wavelengths were calculated after analyzing the regular spectral feature change patterns of different soil at different moisture conditions. Then advantages of the two features at reducing soil types' effects was synthesized to build the NSSAI. Thirdly, a linear relationship between NSSAI and soil moisture was established. The result showed that NSSAI worked better (correlation coefficient is 0.93) than most of other traditional methods in soil moisture extraction. It can weaken the influences caused by soil types at different moisture levels and improve the bare soil moisture inversion accuracy.

Determination of chemical availability of cadmium and zinc in soils using inert soil moisture samplers.

PubMed

Knight, B P; Chaudri, A M; McGrath, S P; Giller, K E

1998-01-01

A rapid method for extracting soil solutions using porous plastic soil-moisture samplers was combined with a cation resin equilibration based speciation technique to look at the chemical availability of metals in soil. Industrially polluted, metal sulphate amended and sewage sludge treated soils were used in our study. Cadmium sulphate amended and industrially contaminated soils all had > 65% of the total soil solution Cd present as free Cd2+. However, increasing total soil Cd concentrations by adding CdSO4 resulted in smaller total soil solution Cd. Consequently, the free Cd2+ concentrations in soil solutions extracted from these soils were smaller than in the same soil contaminated by sewage sludge addition. Amendment with ZnSO4 gave much greater concentrations of free Zn2+ in soil solutions compared with the same soil after long-term Zn contamination via sewage sludge additions. Our results demonstrate the difficulty in comparing total soil solution and free metal ion concentrations for soils from different areas with different physiochemical properties and sources of contamination. However, when comparing the same Woburn soil, Cd was much less available as Cd2+ in soil solution from the CdSO4 amended soils compared with soil contaminated by about 36 years of sewage sludge additions. In contrast, much more Zn was available in soil solution as free Zn2+ in the ZnSO4 amended soils compared with the sewage sludge treated soils.

Global diversity and geography of soil fungi. Minus one widespread group

DOE PAGES

Schadt, Christopher Warren; Rosling, Anna

2015-04-15

In their research article Global diversity and geography of soil fungi Tedersoo et al. (28 November, 2014) present a compelling study regarding patterns of biodiversity of fungi, at a scale unprecedented to date for fungal biogeographical studies. The study demonstrates strong global biogeographic patterns in richness and community composition of soil fungi, what concerns us with the study is what we don t see. Unfortunately this study underestimates fungal diversity of at least one key group of soil fungi due to reliance on a single traditional primer with known flaws, and as a consequence the overall relative abundance of fungalmore » groups may also be skewed.« less

Global diversity and geography of soil fungi. Minus one widespread group

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schadt, Christopher Warren; Rosling, Anna

In their research article Global diversity and geography of soil fungi Tedersoo et al. (28 November, 2014) present a compelling study regarding patterns of biodiversity of fungi, at a scale unprecedented to date for fungal biogeographical studies. The study demonstrates strong global biogeographic patterns in richness and community composition of soil fungi, what concerns us with the study is what we don t see. Unfortunately this study underestimates fungal diversity of at least one key group of soil fungi due to reliance on a single traditional primer with known flaws, and as a consequence the overall relative abundance of fungalmore » groups may also be skewed.« less

Stochastic Modeling of Soil Salinity

NASA Astrophysics Data System (ADS)

Suweis, Samir; Rinaldo, Andrea; van der Zee, Sjoerd E. A. T. M.; Maritan, Amos; Porporato, Amilcare

2010-05-01

Large areas of cultivated land worldwide are affected by soil salinity. Estimates report that 10% of arable land in over 100 countries, and nine million km2 are salt affected, especially in arid and semi-arid regions. High salinity causes both ion specific and osmotic stress effects, with important consequences for plant production and quality. Salt accumulation in the root zone may be due to natural factors (primary salinization) or due to irrigation (secondary salinization). Simple (e.g., vertically averaged over the soil depth) coupled soil moisture and salt balance equations have been used in the past. Despite their approximations, these models have the advantage of parsimony, thus allowing a direct analysis of the interplay of the main processes. They also provide the ideal starting point to include external, random hydro-climatic fluctuations in the analysis of long-term salinization trends. We propose a minimalist stochastic model of primary soil salinity, in which the rate of soil salinization is determined by the balance between dry and wet salt deposition and the intermittent leaching events caused by rainfall events. The long term probability density functions of salt mass and concentration are found by reducing the coupled soil moisture and salt mass balance equation to a stochastic differential equation driven by multiplicative Poisson noise. The novel analytical solutions provide insight on the interplay of the main soil, plant and climate parameters responsible for long-term soil salinization. In fact, soil salinity statistics are obtained as a function of climate, soil and vegetation parameters. These, in turn, can be combined with soil moisture statistics to obtain a full characterization of soil salt concentrations and the ensuing risk of primary salinization. In particular, the solutions show the existence of two quite distinct regimes, the first one where the mean salt mass remains nearly constant with increasing rainfall frequency, and the second one where mean salt content increases markedly with increasing rainfall frequency. As a result, relatively small reductions of rainfall in drier climates may entail dramatic shifts in long-term soil salinization trends, with significant consequences e.g. for climate change impacts on rain-fed agriculture. The analytical nature of the solution allows direct estimation of the impact of changes in the climatic drivers on soil salinity and makes it suitable for computations of salinity risk at the global scale as a function of simple parameters. Moreover it facilitates their coupling with other models of long-term soil-plant biogeochemistry.

Chemical composition and Zn bioavailability of the soil solution extracted from Zn amended variable charge soils.

PubMed

Zampella, Mariavittoria; Adamo, Paola

2010-01-01

A study on variable charge soils (volcanic Italian and podzolic Scottish soils) was performed to investigate the influence of soil properties on the chemical composition of soil solution. Zinc speciation, bioavailability and toxicity in the soil solution were examined. The soils were spiked with increasing amounts of Zn (0, 100, 200, 400 and 1000 mg/kg) and the soil solutions were extracted using rhizon soil moisture samplers. The pH, total organic carbon (TOC), base cations, anions, total Zn and free Zn2+ in soil solution were analysed. A rapid bioassay with the luminescent bacterium Escherichia coli HB101 pUCD607 was performed to assess Zn toxicity. The influence of soil type and Zn treatments on the chemical composition of soil solution and on Zn toxicity was considered and discussed. Different trends of total and free Zn concentrations, base cations desorption and luminescence of E. coli HB101 pUCD607 were observed. The soil solution extracted from the volcanic soils had very low total and free Zn concentrations and showed specific Zn2+/Ca2+ exchange. The soil solution from the podzolic soil had much higher total and free Zn concentrations and showed no evidence of specific Zn2+/Ca2+ exchange. In comparison with the subalkaline volcanic soils, the acidic podzol showed enhanced levels of toxic free Zn2+ and consequently stronger effects on E. coli viability.

soil carbon pools within oak forest is endangered by global climate change in central mexico

NASA Astrophysics Data System (ADS)

García-Oliva, Felipe; Merino, Agustín; González-Rodriguez, Antonio; Chávez-Vergara, Bruno; Tapia-Torres, Yunuen; Oyama, Ken

2016-04-01

Forest soil represents the main C pool in terrestrial ecosystems. In particular, temperate forest ecosystems play an important role in the C budget among tropical countries, such as Mexico. For example, the temperate forest ecosystem contains higher C contents on average (295 Mg C ha-1) than the soil C associated with other ecosystems in Mexico (between 56 to 287 Mg C ha-1). At a regional scale, oak forest has the highest C content (460 Mg C ha-1) among the forest ecosystem in Michoacán State at Central Mexico. At the local scale, the soil C content is strongly affected by the composition of organic matter produced by the plant species. The oak species are very diverse in Mexico, distributed within two sections: Quercus sensu stricto and Lobatae. The oak species from Quercus s.s. section produced litterfall with lower concentrations of recalcitrant and thermostable compounds than oak species from Lobatae section, therefore the soil under the former species had higher microbial activity and nutrient availability than the soil under the later species. However, the forest fragment with higher amount of oak species from Quercus s.s. section increases the amount of soil C contents. Unfortunately, Quercus species distribution models for the central western region of Mexico predict a decrease of distribution area of the majority of oak species by the year 2080, as a consequence of higher temperatures and lower precipitation expected under climate change scenarios. Additionally to these scenarios, the remnant oak forest fragments suffer strong degradation due to uncontrolled wood extraction and deforestation. For this reason, the conservation of oak forest fragments is a priority to mitigate the greenhouse gases emission to the atmosphere. In order to enhance the protection of these forest fragments it is required that the society identify the ecosystem services that are provided by these forest fragments.

Effects of agricultural intensification in the tropics on soil carbon losses and soil fertility

NASA Astrophysics Data System (ADS)

Guillaume, Thomas; Buttler, Alexandre; Kuzyakov, Yakov

2016-04-01

Tropical forest conversion to agricultural land leads to strong decrease of soil organic carbon (SOC). Nonetheless, the impacts of SOC losses on soil fertility remain unclear. We quantified SOC losses in forest, oil palm plantations, extensive rubber plantations and rubber monocultures on Sumatra Island (Indonesia). Furthermore, we assessed the response of biological (basal respiration, microbial biomass, acid phosphatase) and chemical fertility indicators (light fraction of OM, DOC, total N, available P) to SOC losses. We used a new approach based on (non-)linear regressions between SOC losses and the indicators, normalized to natural ecosystem values, to assess the sensitivity or resistance of fertility indicators to SOC losses. Carbon contents in the Ah horizon under oil palm and intensive rubber plantations were strongly reduced: up to 70% and 62%, respectively. The decrease was lower under extensive rubber (41%). The negative impact of land-use changes on all measured indicators increased in the following sequence: extensive rubber < rubber < oil palm. Basal respiration, microbial biomass and nutrients were comparatively resistant to SOC losses, whereas the light fraction of OM was lost faster than the SOC. The resistance of the microbial activity to SOC losses is an indication that microbial-mediated soil functions sustain SOC losses. However, responses of basal respiration and microbial biomass to SOC losses were non-linear. Below 2.7% C content, the relationship was reversed. The basal respiration decreased faster than the SOC, resulting in a stronger drop of microbial activity under oil palm compared to rubber, despite small difference in C content. We conclude that the new approach allows a quantitative assessment of the sensitivity and threshold of various soil functions to land-use changes and consequently, can be used to assess their resistance to agricultural intensification. Therefore, this method is appropriate to evaluate the environmental impacts associated with various scenarios of agricultural intensification in tropical regions, but needs also to be tested in different tropical climate and soil (mineral vs organic) conditions.

Assimilation of ASCAT near-surface soil moisture into the SIM hydrological model over France

NASA Astrophysics Data System (ADS)

Draper, C.; Mahfouf, J.-F.; Calvet, J.-C.; Martin, E.; Wagner, W.

2011-12-01

This study examines whether the assimilation of remotely sensed near-surface soil moisture observations might benefit an operational hydrological model, specifically Météo-France's SAFRAN-ISBA-MODCOU (SIM) model. Soil moisture data derived from ASCAT backscatter observations are assimilated into SIM using a Simplified Extended Kalman Filter (SEKF) over 3.5 years. The benefit of the assimilation is tested by comparison to a delayed cut-off version of SIM, in which the land surface is forced with more accurate atmospheric analyses, due to the availability of additional atmospheric observations after the near-real time data cut-off. However, comparing the near-real time and delayed cut-off SIM models revealed that the main difference between them is a dry bias in the near-real time precipitation forcing, which resulted in a dry bias in the root-zone soil moisture and associated surface moisture flux forecasts. While assimilating the ASCAT data did reduce the root-zone soil moisture dry bias (by nearly 50%), this was more likely due to a bias within the SEKF, than due to the assimilation having accurately responded to the precipitation errors. Several improvements to the assimilation are identified to address this, and a bias-aware strategy is suggested for explicitly correcting the model bias. However, in this experiment the moisture added by the SEKF was quickly lost from the model surface due to the enhanced surface fluxes (particularly drainage) induced by the wetter soil moisture states. Consequently, by the end of each winter, during which frozen conditions prevent the ASCAT data from being assimilated, the model land surface had returned to its original (dry-biased) climate. This highlights that it would be more effective to address the precipitation bias directly, than to correct it by constraining the model soil moisture through data assimilation.

Land-use and fire drive temporal patterns of soil solution chemistry and nutrient fluxes.

PubMed

Potthast, Karin; Meyer, Stefanie; Crecelius, Anna C; Schubert, Ulrich S; Tischer, Alexander; Michalzik, Beate

2017-12-15

Land-use type and ecosystem disturbances are important drivers for element cycling and bear the potential to modulate soil processes and hence ecosystem functions. To better understand the effect of such drivers on the magnitude and temporal patterns of organic matter (OM) and associated nutrient fluxes in soils, continuous flux monitoring is indispensable but insufficiently studied yet. We conducted a field study to elucidate the impact of land-use and surface fires on OM and nutrient fluxes with soil solution regarding seasonal and temporal patterns analyzing short (<3months) and medium-term (3-12months) effects. Control and prescribed fire-treated topsoil horizons in beech forests and pastures were monitored biweekly for dissolved and particulate OM (DOM, POM) and solution chemistry (pH value, elements: Ca, Mg, Na, K, Al, Fe, Mn, P, S, Si) over one post-fire year. Linear mixed model analyses exhibited that mean annual DOM and POM fluxes did not differ between the two land-use types, but were subjected to strong seasonal patterns. Fire disturbance significantly lowered the annual soil solution pH in both land-uses and increased water fluxes, while DOC fluxes remained unaffected. A positive response of POC and S to fire was limited to short-term effects, while amplified particulate and dissolved nitrogen fluxes were observed in the longer run and co-ocurred with accelerated Ca and Mg fluxes. In summary, surface fires generated stronger effects on element fluxes than the land-use. Fire-induced increases in POM fluxes suggest that the particulate fraction represent a major pathway of OM translocation into the subsoil and beyond. With regard to ecosystem functions, pasture ecosystems were less prone to the risk of nutrient losses following fire events than the forest. In pastures, fire-induced base cation export may accelerate soil acidification, consequently exhausting soil buffer systems and thus may reduce the resilience to acidic depositions and disturbances. Copyright © 2017 Elsevier B.V. All rights reserved.

Effects on environment and agriculture of geothermal wastewater and boron pollution in great Menderes basin.

PubMed

Koç, Cengiz

2007-02-01

Boron toxicity is an important disorder that can be limit plant growth on soils of arid and semi arid environments through the world. High concentrations of Boron may occur naturally in the soil or in groundwater, or be added to the soil from mining, fertilizers, or irrigation water. Off all the potential resources, irrigation water is the most important contributor to high levels of soil boron, boron is often found in high concentrations in association with saline soil and saline well water. Although of considerable agronomic importance, our understanding of Boron toxicity is rather fragment and limited. In this study, Boron content of Great Menderes River and Basin was researched. Great Menderes Basin is one of the consequence basins having agricultural potential, aspect of water and soil resources in Turkey. Great Menderes River, water resource of the basin was to be polluted by geothermal wastewater and thermal springs including Boron element. Great Menderes Basin has abundant geothermal water resources which contain high amounts of Boron and these ground water are brought to surface and used for various purposes such as power generation, heating or thermal spring and than discharged to Great Menderes River. In order to prevent Boron pollution and hence unproductively in soils, it is necessary not to discharged water with Boron to irrigation water. According to results, it was obtained that Boron content of River was as high in particular Upper Basin where there was a ground thermal water reservoir. Boron has been accumulated more than plant requirement in this area irrigated by this water. Boron content of River was relatively low in rainy months and irrigation season while it was high in dry season. Boron concentration in the River was to decrease from upstream to downstream. If it is no taken measure presently, about 130,000 ha irrigation areas which was constructed irrigation scheme in the Great Menderes basin will expose the Boron pollution and salinity. Even though Boron concentration of river water is under 0.5 ppm limit value, Boron element will store in basin soils, decrease in crop yields, and occur problematic soils in basin.

Analytical Deriving of the Field Capacity through Soil Bundle Model

NASA Astrophysics Data System (ADS)

Arnone, E.; Viola, F.; Antinoro, C.; Noto, L. V.

2015-12-01

The concept of field capacity as soil hydraulic parameter is widely used in many hydrological applications. Althought its recurring usage, its definition is not univocal. Traditionally, field capacity has been related to the amount of water that remains in the soil after the excess water has drained away and the water downward movement experiences a significant decresase. Quantifying the drainage of excess of water may be vague and several definitions, often subjective, have been proposed. These definitions are based on fixed thresholds either of time, pressure, or flux to which the field capacity condition is associated. The flux-based definition identifies the field capacity as the soil moisture value corresponding to an arbitrary fixed threshold of free drainage flux. Recently, many works have investigated the flux-based definition by varying either the drainage threshold, the geometry setting and mainly the description of the drainage flux. Most of these methods are based on the simulation of the flux through a porous medium by using the Darcy's law or Richard's equation. Using the above-mentioned flux-based definition, in this work we propose an alternative analytical approach for deriving the field capacity based on a bundle-of-tubes model. The pore space of a porous medium is conceptualized as a bundle of capillary tubes of given length of different radii, derived from a known distribution. The drainage from a single capillary tube is given by the analytical solution of the differential equation describing the water height evolution within the capillary tube. This equation is based on the Poiseuille's law and describes the drainage flux with time as a function of tube radius. The drainage process is then integrated for any portion of soil taking into account the tube radius distribution which in turns depends on the soil type. This methodology allows to analytically derive the dynamics of drainage water flux for any soil type and consequently to define the soil field capacity as the latter reachs a given threshold value. The theoretical model also accounts for the tortuosity which characterizes the water pathways in real soils, but neglects the voids mutual interconnections.

Vegetation effects on event water dynamics - Insights from in-situ stable isotope observations and dye patterns

NASA Astrophysics Data System (ADS)

Volkmann, Till; Haberer, Kristine; Gessler, Arthur; Weiler, Markus

2014-05-01

The predicted changes of climate and land-use could have drastic effects on the water balance of ecosystems, particularly under frequent drought and subsequent rewetting conditions. Yet, inference of these effects and related consequences for the structure and functioning of ecosystems, groundwater recharge, leaching of nutrients and pollutants, drinking water availability, and the water cycle is currently impeded by gaps in our understanding of the manifold interactions between vegetation and soil water dynamics. While plants require water and nutrients, they also exert, for instance, important below-ground controls on the distribution and movement of water and chemicals in the rooted soil horizons via uptake and redistribution of water, modification of soil hydraulic properties, and formation of conduits for rapid preferential water flow. This work aims to contribute to fill existing gaps by assessing the effects of different plant types and their rooting systems on the soil water dynamics. Therefore, we conducted artificial drought and subsequent rewetting experiments using isotopically and dye (Brilliant Blue FCF) labeled water on plots of various surface cover (bare soil, grass, beech, oak, vine) established on relatively homogeneous luvisol on loess in southwestern Germany. Detailed insight into the short-term dynamics of event water infiltration and root uptake during the field experiments was facilitated by the application of novel techniques for high-frequency in-situ monitoring of stable isotope signatures in pore and transpiration water using commercial laser-based spectrometers, augmenting conventional observations of soil physicochemical states (soil water content, matric potential, electrical conductivity). The temporal point information is complemented by dye staining profiles, providing a detailed picture of spatial infiltration patterns, and by root density observations. The results of the experiments allow for a comprehensive spatiotemporal characterization of the effects of differing vegetation cover and rooting systems on infiltration, preferential flow path characteristics, and water storage in the rooted soil horizons. This will contribute to an improved ability to estimate environmental change impacts on the fate of water, nutrients, and pollutants in this critical zone and associated feedbacks within the soil-vegetation-atmosphere system.

Spatial distribution pattern of vanadium in hydric landscapes

NASA Astrophysics Data System (ADS)

Fiedler, Sabine; Breuer, Jörn; Palmer, Iris; Berger, Jochen

2010-05-01

The geochemical behavior of the trace element vanadium (V) is strongly influenced by its oxidation state (+2 to +5). Consequently, oxidation/reduction reactions play an important role in controlling the mobilization and immobilization of V in soils. Translocation processes of V within soil profiles (pedons), including podzolization and clay illuviation, are well-documented. With regard to its lateral redistribution in landscapes, V is widely regarded as being immobile. Our investigation focused on the fate of V along a moisture gradient in different temperate humid spruce forest ecosystems in Southwest Germany (MAP 1,200-1,600 mm, MAT 6°C). The areas under investigation are characterized by lateral water flow, caused by a physically pre-weathered periglacial layer with poor water-permeability characteristics at the interface between pedo- and lithosphere. We selected different catenas derived from sandstone, gneiss, and granite, respectively. The soil associations occur along moderately inclined slopes and include common forest soils of three redox categories: an anaerobic Histosol, oxic Cambisols, and Stagnosols with an intermediate redox state. The soils are linked to each other by the lateral subsurface transport of solutes, which allows the investigation of the horizontal (i.e. within pedons) and lateral redistribution (i.e. between pedons) of the redox-sensitive elements V and iron (Fe). The redox potential of V and Fe in different soil depths along the hydrological pathway was both measured in the field and subsequently analyzed in 48 soil horizons to deduce the total content of V and Fe using aqua-regia digestion and element spectrometry (ICP-OES and ICP-MS). The different parent materials result in significant differences in V content. The V content in the sandstone soils (0.2 - 30 mg kg-1) was lower than the V content in granite and gneiss soils (up to 75 and 100 mg kg-1, respectively). Our results demonstrate that V is a highly mobile element in hydric landscapes. Independent from the parent material, we found a distinct spatial pattern of V, which reflected that of the local redox environment: Horizons/pedons with oxic conditions revealed a positive correlation between V content and Fe content. In this case, iron oxides act as an important sink for dissolved V which originated from other locations of the catena. Poorly drained soils, such as Stagnosols for example, promote both Fe and V reduction, which is coupled to their removal from the pedons by leaching. It can be demonstrated that the element-specific Eh window for differential reduction is very narrow. The spatial distribution of both elements shows that high V contents are often associated with low Fe contents. It is therefore assumed that a reducing environment promotes Fe3+ reduction, while maintaining while maintaining V stable.

The impact of warfare on the soil environment

NASA Astrophysics Data System (ADS)

Certini, Giacomo; Scalenghe, Riccardo; Woods, William I.

2013-12-01

One of the most dramatic ways humans can affect soil properties is through the performance of military activities. Warfare-induced disturbances to soil are basically of three types - physical, chemical, and biological - and are aimed at causing direct problems to enemies or, more often, are indirect, undesired ramifications. Physical disturbances to soil include sealing due to building of defensive infrastructures, excavation of trenches or tunnels, compaction by traffic of machinery and troops, or cratering by bombs. Chemical disturbances consist of the input of pollutants such as oil, heavy metals, nitroaromatic explosives, organophosphorus nerve agents, dioxins from herbicides, or radioactive elements. Biological disturbances occur as unintentional consequences of the impact on the physical and chemical properties of soil or the deliberate introduction of microorganisms lethal to higher animals and humans such as botulin or anthrax. Soil represents a secure niche where such pathogens can perpetuate their virulence for decades.

Soil bioindicators as a usefull tools for land management and spatial planning processes: a case-study of prioritization of contaminated soil remediation

NASA Astrophysics Data System (ADS)

Grand, Cécile; Pauget, Benjamin; Villenave, Cécile; Le Guédard, Marina; Piron, Denis; Nau, Jean-François; Pérès, Guénola

2017-04-01

When setting up new land management, contaminated site remediation or soil use change are sometimes necessary to ensure soil quality and the restoration of the ecosystem services. The biological characterization of the soil can be used as complementary information to chemical data in order to better define the conditions for operating. Then, in the context of urban areas, elements on the soil biological quality can be taken into consideration to guide the land development. To assess this "biological state of soil health", some biological tools, called bioindicators, could provide comprehensive information to understand and predict the functioning of the soil ecosystem. In this context, a city of 200 thousand inhabitants has decided to integrate soil bioindicators in their soil diagnostic for their soil urban management. This city had to elaborate a spatial soil management in urban areas which presented soil contamination linked to a complex industrial history associated with bad uses of gardens not always safe for the environment. The project will lead to establish a Natural Urban Park (PNU) in order to develop recreational and leisure activities in a quality environment. In order to complete the knowledge of soil contamination and to assess the transfer of contaminants to the terrestrial ecosystem, a biological characterization of soils located in different areas was carried out using six bioindicators: bioindicators of accumulation which allowed to evaluate the transfers of soil contaminants towards the first 2 steps of a trophic chain (plants and soil fauna, e.g. snails), bioindicators of effects (Omega 3 index was used to assess the effects of soil contamination and to measure their impact on plants), bioindicators of soil functioning (measurement of microbial biomass, nematodes and earthworm community) ; the interest of these last bioindicators is that they also act on the functioning of ecosystems as on the dynamics of organic matter (mineralization) but also on the structuring of the soils. The results from 14 measurement points demonstrated the relatively low average transfers towards the plants and soil fauna although the transfers can be changing a lot in relation to heterogeneity of soil contamination. Results obtained from other bioindicators (nematodes, earthworms and bacterial biomass) showed that the different soils are on average of good biological quality and can benefit from a diversity and abundance of communities of soil organisms. The data obtained in this program underline that these tools can be used to evaluate soil functions (habitat for biodiversity, soil capacity to store contaminants, etc.) and, consequently, the services that the soil can give to humans. Moreover, these biological tools allowed to assess the biological quality of soils and their compatibility with the soil use and the necessity of soil remediation (excavation of hot-spots, surface cover etc ..).Taking into account not only the behavior of soil contaminants but also the environmental factors that influence the biological functioning of the soil, these tools can be useful for land management of large-scale sites and for brownfield conquest.

Hydrologic impacts of thawing permafrost—A review

USGS Publications Warehouse

Walvoord, Michelle Ann; Kurylyk, Barret L.

2016-01-01

Where present, permafrost exerts a primary control on water fluxes, flowpaths, and distribution. Climate warming and related drivers of soil thermal change are expected to modify the distribution of permafrost, leading to changing hydrologic conditions, including alterations in soil moisture, connectivity of inland waters, streamflow seasonality, and the partitioning of water stored above and below ground. The field of permafrost hydrology is undergoing rapid advancement with respect to multiscale observations, subsurface characterization, modeling, and integration with other disciplines. However, gaining predictive capability of the many interrelated consequences of climate change is a persistent challenge due to several factors. Observations of hydrologic change have been causally linked to permafrost thaw, but applications of process-based models needed to support and enhance the transferability of empirical linkages have often been restricted to generalized representations. Limitations stem from inadequate baseline permafrost and unfrozen hydrogeologic characterization, lack of historical data, and simplifications in structure and process representation needed to counter the high computational demands of cryohydrogeologic simulations. Further, due in part to the large degree of subsurface heterogeneity of permafrost landscapes and the nonuniformity in thaw patterns and rates, associations between various modes of permafrost thaw and hydrologic change are not readily scalable; even trajectories of change can differ. This review highlights promising advances in characterization and modeling of permafrost regions and presents ongoing research challenges toward projecting hydrologic and ecologic consequences of permafrost thaw at time and spatial scales that are useful to managers and researchers.

Climate Variability, Dissolved Organic Carbon, UV Exposure, and Amphibian Decline

NASA Astrophysics Data System (ADS)

Brooks, P. D.; O'Reilly, C. M.; Diamond, S.; Corn, S.; Muths, E.; Tonnessen, K.; Campbell, D. H.

2001-12-01

Increasing levels of UV radiation represent a potential threat to aquatic organisms in a wide range of environments, yet controls on in situ variability on UV exposure are relatively unknown. The primary control on the penetration of UV radiation in surface water environments is the amount of photoreactive dissolved organic carbon (DOC). Consequently, biogeochemical processes that control the cycling of DOC also affect the exposure of aquatic organisms to UV radiation. Three years of monitoring UV extinction and DOC composition in Rocky Mountain, Glacier, Sequoia/ Kings Canyon, and Olympic National Parks demonstrate that the amount of fulvic acid DOC is much more important than the total DOC pool in controlling UV attenuation. This photoreactive component of DOC originates primarily in soil, and is subject both to biogeochemical controls (e.g. temperature, moisture, vegetation, soil type) on production, and hydrologic controls on transport to surface water and consequently UV exposure to aquatic organisms. Both of these controls are positively related to precipitation with greater production and transport associated with higher precipitation amounts. For example, an approximately 20 percent reduction in precipitation from 1999 to 2000 resulted in a 27% - 59% reduction in the amount of photoreactive DOC at three sites in Rocky Mountain National Park. These differences in the amount of hydrophobic DOC result in an increase in UV exposure in the aquatic environment by a factor of 2 or more. Implications of these findings for observed patterns of amphibian decline will be discussed.

Identification of soil associations in western South Dakota on ERTS-1 imagery

NASA Technical Reports Server (NTRS)

Westin, F. C.; Myers, V. I.

1973-01-01

Soil association maps show the spatial relationships of land units having characteristic soil depths and textures, available water capacities, permeabilities, pH characteristics, plasticity indices, liquid limits, and the like, from which broad interpretations can be made such as how the soil is suited as a source for top soil, and as a source for sand and gravel, and how corrosive the soil is for steel and concrete, and what crop and grass yields can be expected. Film color composites of bands 4, 5 and 7 viewed over a light table with magnification show the soil associations of western South Dakota that are now recognized, and, in addition, several new soil association areas have been brought to light.

A methodology for estimating risks associated with landslides of contaminated soil into rivers.

PubMed

Göransson, Gunnel; Norrman, Jenny; Larson, Magnus; Alén, Claes; Rosén, Lars

2014-02-15

Urban areas adjacent to surface water are exposed to soil movements such as erosion and slope failures (landslides). A landslide is a potential mechanism for mobilisation and spreading of pollutants. This mechanism is in general not included in environmental risk assessments for contaminated sites, and the consequences associated with contamination in the soil are typically not considered in landslide risk assessments. This study suggests a methodology to estimate the environmental risks associated with landslides in contaminated sites adjacent to rivers. The methodology is probabilistic and allows for datasets with large uncertainties and the use of expert judgements, providing quantitative estimates of probabilities for defined failures. The approach is illustrated by a case study along the river Göta Älv, Sweden, where failures are defined and probabilities for those failures are estimated. Failures are defined from a pollution perspective and in terms of exceeding environmental quality standards (EQSs) and acceptable contaminant loads. Models are then suggested to estimate probabilities of these failures. A landslide analysis is carried out to assess landslide probabilities based on data from a recent landslide risk classification study along the river Göta Älv. The suggested methodology is meant to be a supplement to either landslide risk assessment (LRA) or environmental risk assessment (ERA), providing quantitative estimates of the risks associated with landslide in contaminated sites. The proposed methodology can also act as a basis for communication and discussion, thereby contributing to intersectoral management solutions. From the case study it was found that the defined failures are governed primarily by the probability of a landslide occurring. The overall probabilities for failure are low; however, if a landslide occurs the probabilities of exceeding EQS are high and the probability of having at least a 10% increase in the contamination load within one year is also high. Copyright © 2013 Elsevier B.V. All rights reserved.

Soil crusts to warm the planet

NASA Astrophysics Data System (ADS)

Garcia-Pichel, Ferran; Couradeau, Estelle; Karaoz, Ulas; da Rocha Ulisses, Nunes; Lim Hsiao, Chiem; Northen, Trent; Brodie, Eoin

2016-04-01

Soil surface temperature, an important driver of terrestrial biogeochemical processes, depends strongly on soil albedo, which can be significantly modified by factors such as plant cover. In sparsely vegetated lands, the soil surface can also be colonized by photosynthetic microbes that build biocrust communities. We used concurrent physical, biochemical and microbiological analyses to show that mature biocrusts can increase surface soil temperature by as much as 10 °C through the accumulation of large quantities of a secondary metabolite, the microbial sunscreen scytonemin, produced by a group of late-successional cyanobacteria. Scytonemin accumulation decreases soil albedo significantly. Such localized warming had apparent and immediate consequences for the crust soil microbiome, inducing the replacement of thermosensitive bacterial species with more thermotolerant forms. These results reveal that not only vegetation but also microorganisms are a factor in modifying terrestrial albedo, potentially impacting biosphere feedbacks on past and future climate, and call for a direct assessment of such effects at larger scales. Based on estimates of the global biomass of cyanobacteria in soil biocrusts, one can easily calculate that there must currently exist about 15 million metric tons of scytonemin at work, warming soil surfaces worldwide

134Cs uptake by four plant species and Cs-K relations in the soil-plant system as affected by Ca(OH)2 application to an acid soil.

PubMed

Massas, I; Skarlou, V; Haidouti, C; Giannakopoulou, F

2010-03-01

Three rates of Ca(OH)(2) were applied to an acid soil and the (134)Cs uptake by radish, cucumber, soybean and sunflower plants was studied. The (134)Cs concentration in all plant species was reduced from 1.6-fold in the sunflower seeds to 6-fold in the soybean vegetative parts at the higher Ca(OH)(2) rate. Potassium (K) concentration in plants was also reduced, but less effectively. The significantly decreased (134)Cs-K soil to plant distribution factors (D.F.) clearly suggest a stronger effect of soil liming on (134)Cs than on K plant uptake. This observation was discussed in terms of ionic interactions in the soil matrix and within the plants. The results also indicated that the increased Ca(2+) concentration in the exchange phase and in the soil solution along with the improved root activity, due to the soil liming, enhanced the immobilization of (134)Cs in the soil matrix and consequently lowered the (134)Cs availability for plant uptake. 2009 Elsevier Ltd. All rights reserved.

Microplastic transport in soil by earthworms.

PubMed

Rillig, Matthias C; Ziersch, Lisa; Hempel, Stefan

2017-05-02

Despite great general benefits derived from plastic use, accumulation of plastic material in ecosystems, and especially microplastic, is becoming an increasing environmental concern. Microplastic has been extensively studied in aquatic environments, with very few studies focusing on soils. We here tested the idea that microplastic particles (polyethylene beads) could be transported from the soil surface down the soil profile via earthworms. We used Lumbricus terrestris L., an anecic earthworm species, in a factorial greenhouse experiment with four different microplastic sizes. Presence of earthworms greatly increased the presence of microplastic particles at depth (we examined 3 soil layers, each 3.5 cm deep), with smaller PE microbeads having been transported downward to a greater extent. Our study clearly shows that earthworms can be significant transport agents of microplastics in soils, incorporating this material into soil, likely via casts, burrows (affecting soil hydraulics), egestion and adherence to the earthworm exterior. This movement has potential consequences for exposure of other soil biota to microplastics, for the residence times of microplastic at greater depth, and for the possible eventual arrival of microplastics in the groundwater.

Evidence for montmorillonite or its compositional equivalent in Columbia Hills, Mars

USGS Publications Warehouse

Clark, B. C.; Arvidson, R. E.; Gellert, Ralf; Morris, R.V.; Ming, D. W.; Richter, L.; Ruff, S.W.; Michalski, J.R.; Farrand, W. H.; Yen, A. S.; Herkenhoff, K. E.; Li, R.; Squyres, S. W.; Schroder, C.; Klingelhofer, G.; Bell, J.F.

2007-01-01

During its exploration of the Columbia Hills, the Mars Exploration Rover "Spirit" encountered several similar samples that are distinctly different from Martian meteorites and known Gusev crater soils, rocks, and sediments. Occurring in a variety of contexts and locations, these "Independence class" samples are rough-textured, iron-poor (equivalent FeO ??? 4 wt%), have high Al/Si ratios, and often contain unexpectedly high concentrations of one or more minor or trace elements (including Cr, Ni, Cu, Sr, and Y). Apart from accessory minerals, the major component common to these samples has a compositional profile of major and minor elements which is similar to the smectite montmorillonite, implicating this mineral, or its compositional equivalent. Infrared thermal emission spectra do not indicate the presence of crystalline smectite. One of these samples was found spatially associated with a ferric sulfate-enriched soil horizon, possibly indicating a genetic relationship between these disparate types of materials. Compared to the nearby Wishstone and Watchtower class rocks, major aqueous alteration involving mineral dissolution and mobilization with consequent depletions of certain elements is implied for this setting and may be undetectable by remote sensing from orbit because of the small scale of the occurrences and obscuration by mantling with soil and dust. Copyright 2007 by the American Geophysical Union.

Linking spatial patterns of soil redistribution traced with 137Cs and soil nutrients in a Mediterranean mountain agroecosystem (NE Spain)

NASA Astrophysics Data System (ADS)

Quijano, Laura; Gaspar, Leticia; Navas, Ana

2016-04-01

Mediterranean mountain agroecosystems are prone to soil loss mainly due to the accelerated erosion as a consequence of human induced changes from agriculture and grazing practices over the last centuries and the climatic conditions (i.e. irregular and scarce precipitations and drought periods). Soil erosion leads to soil degradation inducing the loss of soil functions. The progressive decline of soil functions thereof soil quality is associated to a decrease of soil productivity and can threat the sustainability of cultivated soils. The use of fallout 137Cs as a soil movement tracer provides useful data to identify areas where loss and gain of 137Cs occurs and that of soil. This study aims to address soil movement and soil nutrient dynamics closely related to the status of soil degradation. A rain-fed cereal field (1.6 ha) representative of Mediterranean mountain agricultural landscapes (42°25'41''N 1°13'8''W) was selected to examine the effects of soil redistribution processes on the spatial variability of soil organic carbon (SOC) and nitrogen (SON) and their relationships with soil properties and topographic characteristics. From the hydrological point of view, the field is isolated due to the effect of landscape features and man-made structures. Climate is continental Mediterranean with an average annual rainfall of 500 mm and soils are Calcisols. The reference inventories of 137Cs and soil nutrients were established from 21 soil samples collected in nearby undisturbed areas under typical Mediterranean vegetation cover. A total of 156 bulk soil samples (30-50 cm depth) and 156 topsoil samples (5 cm) were collected on a 10 m grid. 137Cs and soil nutrients loss and gain areas were identified by comparing the reference inventories with the values of inventories at the sampling points. A new approach to characterize and measure active (ACF) and stable (SCF) carbon fraction contents by using a dry combustion method based on the oxidation temperature of carbon fractions to analyze the SOC pool dynamics is presented in this study. A detailed field topographic survey and mapping of the spatial variability of soil properties and nutrient contents from soil analyses displayed similar spatial patterns of 137Cs and soil nutrients that also were directly and significantly correlated (p≤0.01). As much as 70% of the surface of the study field had lower values of 137Cs inventory indicating a predominance of soil loss linked to a generalized loss of soil nutrients. SOC gain was found in less than 1% of the study field and there was a large loss of SON compared to the undisturbed reference site. Higher and significant (p≤0.01) contents of soil nutrients were found in topsoil samples than in the bulk ones. Furthermore, there was an enrichment of the relative contribution of ACF to total SOC in sampling points where there was a 137Cs gain in both bulk and topsoil samples. Understanding patterns of soil nutrients can be useful for developing and implementing land management strategies to preserve soil quality in Mediterranean agricultural areas.

Transformations, transport, and potential unintended consequences of high sulfur inputs to Napa Valley vineyards

PubMed Central

Hinckley, Eve-Lyn S.; Matson, Pamela A.

2011-01-01

Unintended anthropogenic deposition of sulfur (S) to forest ecosystems has a range of negative consequences, identified through decades of research. There has been far less study of purposeful S use in agricultural systems around the world, including the application of elemental sulfur (S0) as a quick-reacting fungicide to prevent damage to crops. Here we report results from a three-year study of the transformations and flows of applied S0 in soils, vegetation, and hydrologic export pathways of Napa Valley, CA vineyards, documenting that all applied S is lost from the vineyard ecosystem on an annual basis. We found that S0 oxidizes rapidly to sulfate () on the soil surface where it then accumulates over the course of the growing season. Leaf and grape tissues accounted for only 7–13% of applied S whereas dormant season cover crops accounted for 4–10% of applications. Soil S inventories were largely and ester-bonded sulfates; they decreased from 1,623 ± 354 kg ha-1 during the dry growing season to 981 ± 526 kg ha-1 (0–0.5 m) during the dormant wet season. Nearly all S applied to the vineyard soils is transported offsite in dissolved oxidized forms during dormant season rainstorms. Thus, the residence time of reactive S is brief in these systems, and largely driven by hydrology. Our results provide new insight into how S use in vineyards constitutes a substantial perturbation of the S cycle in Northern California winegrowing regions and points to the unintended consequences that agricultural S use may have at larger scales. PMID:21825150

Ammonia emissions from urea application to permanent pasture on a volcanic soil

NASA Astrophysics Data System (ADS)

Salazar, F.; Martínez-Lagos, J.; Alfaro, M.; Misselbrook, T.

2012-12-01

Agriculture is the largest source of ammonia (NH3) emission to the atmosphere, deriving mainly from livestock urine and manures, but fertilizer applications to pastures and crops also represent an important source. In Chile, where agriculture and cattle production are important activities (accounting for 4.5% of GDP along with the forestry sector), there are very few published data regarding NH3 emissions from pasture and crop fertilization. This study aimed to provide the first empirical field data for Chile on N losses due to NH3 volatilization following urea application to permanent pasture on a volcanic soil and to assess the influence of environmental conditions on emissions. Four field experiments were carried out on a volcanic acid soil using the micrometeorological integrated horizontal flux (IHF) mass balance method. Measurements were made in winter 2005 and 2007, and spring 2007 and 2008 following urea N fertilization to a permanent pasture at a rate equivalent to 100 kg N ha-1. Cumulative NH3 emissions over the measurement period were 1.4 and 7.7 kg N ha-1 for winter applications, and 12.2 and 26.7 kg N ha-1 for spring dressings. These N losses due to NH3 volatilization are within the range of emissions reported elsewhere. Consideration of urea application timing in Chile, with regards to weather and soil conditions, could have important consequences on minimising potential N losses via volatilization with associated financial benefits to farmers.

Recovery of Areas Degraded by Mining Within the Amazon Forest: Interaction of the Physical Condition of Soil and Biological Activity

NASA Astrophysics Data System (ADS)

Ribeiro, A. I.; Mello, G. F.; Longo, R. M.; Fengler, F. H.; Peche Filho, A., Sr.

2017-12-01

One of the greatest natural riches of Brazil is the Amazon rainforest. The Amazon region is known for its abundance of mineral resources, and may include topaz, oil, and especially cassiterite. In this scope, the mining sector in Brazil has great strategic importance because it accounts for approximately 30% of the country's exports with a mineral production of 40 billion dollars (Brazilian Mining Institute, 2015). In this scenario, as a consequence of mining, the Amazonian ecosystem has been undergoing a constant process of degradation. An important artifice in the exploitation of mineral resources is the rehabilitation and/or recovery of degraded areas. This recovery requires the establishment of degradation indicators and also the quality of the soil associated with its biota, since the Amazonian environment is dynamic, heterogeneous and complex in its physical, chemical and biological characteristics. In this way, this work presupposes that it is possible to characterize the different stages of recovery of tillage floor areas in deactivated cassiterite mines, within the Amazonian forest, in order to evaluate the interactions between the level of biological activity (Serrapilheira Height, Coefficient Metabolic, Basal Breath) and physical soil characteristics (aggregate DMG, Porosity, Total Soil Density, Moisture Content), through canonical correlation analysis. The results present correlations between the groups of indicators. Thus, from the use of the groups defined by canonical correlations, it was possible to identify the response of the set of physical and biological variables to the areas at different stages of recovery.

How does vineyard management intensity affect ecosystem services and disservices - insights from a meta-analysis

NASA Astrophysics Data System (ADS)

Winter, Silvia; Zaller, Johann G.; Kratschmer, Sophie; Pachinger, Bärbel; Strauss, Peter; Bauer, Thomas; Paredes, Daniel; Gómez, José A.; Guzmán, Gema; Landa, Blanca; Nicolai, Annegret; Burel, Francoise; Cluzeau, Daniel; Popescu, Daniela; Bunea, Claudiu-Ioan; Potthoff, Martin; Guernion, Muriel; Batáry, Péter

2016-04-01

Viticultural agro-ecosystems provide a range of different ecosystem services which are affected by management decisions of winegrowers. At the global scale, vineyards are often high intensity agricultural systems with bare soil or inter-row vegetation consisting of only a few plant species. These systems primarily aim at optimizing wine production by reducing competition for water and nutrients between grapevines and weeds and by preventing the outbreak of pests and diseases. At the same time, this kind of management is often associated with ecosystem disservices such as high rates of soil erosion, degradation of soil structure and fertility, contamination of groundwater and decline of biodiversity. Recently, several initiatives across the world tried to overcome detrimental effects of that management style by creating biodiversity friendly vineyards. The consequences of establishing divers cover crop mixes or tolerating spontaneous vegetation in vineyards for ecosystem services (including yield) overstretching local case studies has not been investigated yet. This meta-analysis will provide an overview of all published studies comparing the effects of different vineyard management practices on a range of different ecosystem services like biodiversity, pest control, pollination, soil conservation and carbon sequestration. The aggregated effect size will point out which management measures can provide the best overall net sum of ecosystem services. This meta-analysis is part of the transdisciplinary BiodivERsA project VineDivers and will ultimately lead into management and policy recommendations for various stakeholder groups engaged in viticulture.

Sorption, Leaching, and Surface Runoff of Beef Cattle Veterinary Pharmaceuticals under Simulated Irrigated Pasture Conditions.

PubMed

Popova, Inna E; Bair, Daniel A; Tate, Kenneth W; Parikh, Sanjai J

2013-07-01

The use of veterinary pharmaceuticals in beef cattle has led to concerns associated with the development of antibiotic resistance in bacteria and endocrine disruption in aquatic organisms. Despite the potential negative consequences, data on the transport and mitigation of pharmaceuticals in grazed watersheds with irrigated pasture are scarce. The objective of this study was to assess the transport of common beef cattle pharmaceuticals (oxytetracycline, chlortetracycline, and ivermectin) via surface runoff and leachate from manure amended to grass-vegetated soil boxes under irrigated pasture conditions. The transport of pharmaceuticals from animal manure in surface runoff and soil leachate was relatively low and appears to be limited by desorption and transport of pharmaceuticals entrained in the manure. In surface runoff, less than 4.2% of applied pharmaceuticals in manure (initial concentration: 0.2 mg kg of manure) was detected after 3 wk of irrigation. Concentrations of pharmaceuticals in surface runoff and leachate never exceeded 0.5 μg L. The major portion of pharmaceuticals (up to 99%) was retained in the manure or in the soil directly beneath the manure application site. Based on the minimal transport of oxytetracycline, chlortetracycline, and ivermectin, the risk of significant transport for these targeted beef cattle pharmaceuticals to surface water and groundwater from manure on irrigated pasture appears to be relatively low. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Impact of groundwater levels on evaporation and water-vapor fluxes in highly saline soils

NASA Astrophysics Data System (ADS)

Munoz, J. F.; Hernández, M. F.; Braud, I.; Gironas, J. A.; Suarez, F. I.

2012-12-01

In aquifers of arid and hyper-arid zones, such as those occurring in the Chilean Andes high plateau, it is important to determine both the quantity and location of water discharges at the temporal scales of interest to close the basin's water budget and thus, to manage the water resource properly. In zones where shallow aquifers are the main source of water, overexploitation of the water resource changes the dynamics of water, heat and solute transport in the vadose zone. As aquifers are exploited, fluctuations in depth to groundwater are exacerbated. These fluctuations modify both soil structure and evaporation from the ground, which is typically the most important discharge from the water budget and is very difficult to estimate. Therefore, a correct quantification of evaporation from these soils is essential to improve the accuracy of the water balance estimation. The objective of this study was to investigate the evaporation processes and water-vapor fluxes in a soil column filled with a saline soil from the Salar del Huasco basin, Chile. Water content, electrical conductivity and temperature at different depths in the soil profile were monitored to determine the liquid and vapor fluxes within the soil column. The results showed that evaporation is negligible when the groundwater table is deeper than 1 m. For shallower groundwater levels, evaporation increases in an exponential fashion reaching a value of 3 mm/day when the groundwater table is near the surface of the ground. These evaporation rates are on the same order of magnitude than the field measurements, but slightly lower due to the controlled conditions maintained in the laboratory. Isothermal fluid fluxes were predominant over the non-isothermal fluid and water vapor fluxes. The net flux for all the phreatic levels tested in the laboratory showed different behaviors, with ascending or descending flows as a consequence of changes in water content and temperature distribution within the soil. It was found that evaporation from bare soils occurs as a consequence of vapor transport due to the thermal gradients. This vapor transport was also influences by the salinity of the soil.

Effects of fire and three fire-fighting chemicals on main soil properties, plant nutrient content and vegetation growth and cover after 10 years.

PubMed

Fernández-Fernández, M; Gómez-Rey, M X; González-Prieto, S J

2015-05-15

The study addresses a knowledge-gap in the long-term ecological consequences of fire and fire-fighting chemicals. Ten years after a prescribed fire and the application of three fire-fighting chemicals, their effects on the soil-plant system were evaluated. Five treatments were established: unburnt soils (US) and burnt soils treated with water alone (BS), foaming agent (BS+Fo), Firesorb (BS+Fi) and ammonium polyphosphate (BS+Ap). Soils (0-2 cm depth) and foliar material of shrubs (Erica umbellata, Pterospartum tridentatum and Ulex micranthus) and trees (Pinus pinaster) were analysed for total N, δ(15)N, and soil-available and plant total macronutrients and trace elements. Soil pH, NH₄(+)-N and NO₃(-)-N; pine basal diameter and height; and shrub cover and height were also measured. Compared with US plots, burnt soils had less nitrates and more Mo. Although differences were not always significant, BS+Ap had the highest levels of soil available P, Na and Al. Plants from BS+Ap plots had higher values of δ(15)N (P. pinaster and E. umbellata), P (all species), Na (P. tridentatum and U. micranthus) and Mg (E. umbellata and P. tridentatum) than other treatments; while K in plants from BS+Ap plots was the highest among treatments for P. pinaster and the lowest for the shrubs. Pines in US plots were higher and wider than in burnt treatments, except for BS+Ap, where the tallest and widest trees were found, although half of them were either dead (the second highest mortality after BS+Fi) or had a distorted trunk. BS+Ap was the treatment with strongest effects on plants, showing E. umbellata the lowest coverage and height, P. tridentatum the highest coverage, U. micranthus one of the lowest coverages and being the only treatment where Genista triacanthos was absent. Consequently, it is concluded that both fire and ammonium polyphosphate application had significant effects on the soil-plant system after 10 years. Copyright © 2015 Elsevier B.V. All rights reserved.

ERTS data user no. 119: Effective use of ERTS multisensor data in the Great Plains. ERTS-1 MSS imagery: A tool for identifying soil associations

NASA Technical Reports Server (NTRS)

Myers, V. I. (Principal Investigator); Westin, F. C.

1973-01-01

The author has identified the following significant results. Soil association maps show the spatial relationships of land units developed in unique climatic, geologic, and topographic environments, and having characteristic slopes, soil depths, textures, available water capacities, permeabilities, and the like. ERTS-1 imagery was found to be a useful tool in the identification of soil associations since it provides a synoptic view of an 8 million acre scene, which is large enough so that the effect can be seen on soils of climate, topography, and geology. A regional view also allows soil associations to be observed over most, if not all, of their extent. ERTS-1 MSS imagery also provides four spectral bands taken every 18 days which give data on relief, hydrology, and vegetation, all of which bear on the delineation and interpretation of soil associations. Enlarged prints derived from the individual spectral bands and shown in gray tones were useful for identifying soil associations.

An approach for mapping the vulnerability of European Union soils to antibiotic contamination.

PubMed

de la Torre, Ana; Iglesias, Irene; Carballo, Matilde; Ramírez, Pablo; Muñoz, María Jesús

2012-01-01

Release of antibiotics into the environment through the agricultural reuse of animal manure is considered a cause of chronic environmental exposure that often leads to adverse ecotoxicological effects, as well as to the introduction of antibiotic-resistant bacteria into the environment. The vulnerability of soil to antibiotic contamination plays a major role in determining the extent of the contamination and the likelihood of the emergence of antibiotic resistance and the appearance of ecotoxicological effects. It depends on soil characteristics, which vary across Europe, and antibiotic characteristics, which vary across drug classes. Understanding how soil vulnerability varies geographically for different veterinary medicinal products would be very useful for resource allocation among surveillance programmes. This paper performs risk analysis of the EU region for 12 antimicrobials using a spatial assessment performed in four steps. First, antibiotic release was estimated based on livestock density. Then exposure was estimated based on antimicrobial soil contamination. Third, consequences were modelled based on soil uses. Finally, risk was estimated by combining release, exposure and consequences using spatial multicriteria decision analysis. A final risk value for soil vulnerability was calculated for each antibiotic studied and displayed in chloropletic maps (ArcGIS 9.3). Furthermore, the Getis-Ord Gi statistic was used to identify clusters of areas at high risk for antibiotic soil contamination. Enrofloxacin was the highest-risk antibiotic in the European Union, followed by tetracyclines, tylosin and sulfodiazine. The highest risk values were found in Belgium, Ireland, Netherlands, Switzerland, Denmark, Germany and the UK. The results suggest that this methodology can be used successfully for evaluating the contamination potential of antibiotics over large areas with limited input data. This work is a preliminary step towards prioritising the use of veterinary medicinal products (VMPs), orientating monitoring studies and antimicrobial surveillance programmes, and informing sustainable decision-making for interventions designed to mitigate the risk of VMPs. Copyright © 2011 Elsevier B.V. All rights reserved.

Site preparation burning to improve southern Appalachian pine-hardwood stands: nitrogen responses in soil, soil water, and streams

Treesearch

Jennifer D. Knoepp; Wayne T. Swank

1993-01-01

Few studies have examined the consequences of site preparation burning in an ecosystem context. As Swift et al. (1993) explain in detail, a major study is being conducted in the southern Appalachians to understand the effects of a fell and bum site preparation treatment on basic ecosystem processes and the integrated response to disturbance. The intent is to determine...

Humic Substances-dependent Aggregation and Transport of Cerium Oxide Nanoparticles in Porous Media at Different pHs and Ionic Strengths

NASA Astrophysics Data System (ADS)

Mu, L.; Jacobson, A. R.; Darnault, C. J. G.

2015-12-01

Cerium oxide nanoparticles (CeO2 NPs) are commonly used in several fields and industries, such as chemical and pharmaceutical, due to both their physical and chemical properties. For example, they are employed in the manufacturing of catalysts, as fuel additives, and as polishing agents. The release and exposure to CeO2 NPs can occur during their fabrication, application, and waste disposal, as well as through their life-cycle and accidents. Therefore, the assessment of the dynamic nature of CeO2 NPs stability and mobilty in the environment is of paramount importance to establish the environmental and public health risks associated with their inevitable release in the environment. Humic substances are a key element of soils and have been revealed to possibly affect the fate and transport of nanoparticles in soils. Consequently, our present research aims at investigating the influence that different pHs, monovalent and divalent cations, Suwannee River humic acid, and Suwanee River fulvic acid have on the aggregation, transport, and deposition of CeO2 NPs. Batch studies performed with different concentrations of humic and fulvic acids associated with a wide spectrum of pHs and ionic strengths were examined. Key variables from these batch studies were then examined to simulate experimental conditions commonly encountered in the soil-water system to conduct column transport experiments in order to establish the fate and transport of CeO2 NPs in saturated porous media, which is a critical phase in characterizing the behavior of CeO2 NPs in subsurface environmental systems.

Fire Severity and Soil Carbon Combustion in Boreal and Tundra Ecosystems

NASA Astrophysics Data System (ADS)

Walker, X. J.; Mack, M. C.; Baltzer, J. L.; Cummings, S.; Day, N.; Goetz, S.; Johnstone, J. F.; Rogers, B. M.; Turetsky, M. R.

2016-12-01

Climate warming in northern latitudes has led to an intensification of wildfire disturbance. Increased fire frequency, extent, and severity is expected to strongly impact the structure and function of northern ecosystems. In this study, we examined 50 sites in a recently burned tundra ecosystem of Alaska, USA and 250 sites in recently burned boreal conifer forest ecosystems of Northwest Territories, Canada. The majority of organic carbon (C) in both boreal and tundra ecosystems resides in the soil organic layer (SOL) and combustion of this layer can lead to large C emissions. Through examining multiple fire scars in different regions, ranging in moisture, elevation, and pre-fire vegetation communities, we can determine the ecosystem, landscape, and regional controls on SOL combustion and the potential shift in C storage. In this research, we use scalable SOL consumption metrics to estimate depth of burn and the associated C emissions. Preliminary results from boreal conifer sites indicate that nearly 50% of the pre-fire soil C pool was combusted and that over 75% of the total C emitted from the extreme fire year of 2014 can be attributed to combustion of the SOL. Increased combustion of SOL associated with an intensifying fire regime could shift boreal and tundra ecosystems across a C cycle threshold: from net accumulation of C from the atmosphere over multiple fire cycles, to a net loss. Understanding changes in SOL combustion and C storage is essential for assessing the consequences of an altered fire regime on permafrost dynamics, vegetation regeneration, and the initiation of successional trajectories in tundra and boreal ecosystems.

Excessive afforestation and soil drying on China's Loess Plateau

NASA Astrophysics Data System (ADS)

Zhang, Shulei; Yang, Dawen

2017-04-01

Afforestation and deforestation are human disturbances to vegetation, which have profound impacts on regional eco-hydrological processes, the water and carbon cycles, and consequently, ecosystem sustainability. Since 1999, large scale revegetation has been carried out across China's Loess Plateau following the "Grain-to-Green Program" implemented by the Chinese government. This revegetation, particularly with forest, has caused negative eco-hydrological consequences, including streamflow decline and soil drying. Here, we have used "ecosystem optimality theory" and satellite observations, to assess the water balance under the climate-defined optimal and actual vegetation cover during 1982-2010 and its responses to future climate change (2011-2050) over the Loess Plateau. Results show that the current vegetation cover (0.48 on average) has already exceeded the climate-defined optimal cover (0.43 on average) in the most recent decade, especially in the middle-to-east Loess Plateau, indicating that it is the widespread over-planting, which is primarily responsible for soil drying in the area. In addition, both the optimal vegetation cover and soil moisture tend to decrease under future climate scenarios. Our findings suggest that further revegetation on the Loess Plateau should be applied with caution. To maintain a sustainable eco-hydrological environment in the region, a revegetation threshold should be urgently set, to limit future planting.

X-ray CT imaging and image-based modelling study of gas exchange in the rice rhizosphere

NASA Astrophysics Data System (ADS)

Affholder, Marie-Cecile; Keyes, Samuel David; Roose, Tiina; Heppell, James; Kirk, Guy

2016-04-01

We used X-ray computer tomography and image-based modelling to investigate CO2 uptake by rice roots growing in submerged soil, and its consequences for the chemistry and biology of the rhizosphere. From previous work, three processes are known to greatly modify the rhizophere of rice and other wetland plants: (1) oxygenation of the submerged, anoxic soil by O2 transported through the root gas channels (aerenchyma); (2) oxidation of ferrous iron and resulting accumulation of ferric oxide; and (3) pH changes due to protons formed in iron oxidation and released from the roots to balance excess intake of cations over anions. A further process, so far not much investigated, is the possibility of CO2 uptake by the roots. Large amounts of CO2 accumulate in submerged soils because CO2 formed in soil respiration escapes only slowly by diffusion through the water-saturated soil pores. There is therefore a large CO2 gradient between the soil and the aerenchyma inside the root, and CO2 may be taken up by the roots and vented to the atmosphere. The extent of this and its consequences for rhizosphere chemistry and biology are poorly understood. We grew rice plants in a submerged, strongly-reduced, Philippine rice soil contained in 10-cm diameter, 20-cm deep Perspex pots. Four-week old rice seedlings, grown in nutrient culture, were transplanted into the pots at either 1 or 4 plants per pot, planted closely together. After 3 and 4 weeks, the pots were analysed with an X-ray CT scanner (Custom Nikon/Xtek Hutch; 80 mm by 56 mm field of view and 40 μm voxel size). Gas bubbles were extracted from the data by 3D median filtering and roots using a region-growth method. The images showed prominent and abundant gas bubbles in the soil bulk, but no or very few bubbles in the soil close to roots. There was a clear relation between the absence of gas bubbles and the presence of roots, as well as an increasing concentration of bubbles with depth through the soil. Analysis of the bubbles showed they were approximately 50% CO2 by volume and 50% CH4. The corresponding concentrations of dissolved CO2 + HCO3- (NB CO2 is 20-times more soluble than CH4) in the soil bulk were of the order of 100 mM. We developed a mathematical model of CO2 generation and transport in submerged soil with uptake by and transport through rice roots, and used it to analyse the images. This showed that the observed depletion of CO2 around the roots was consistent with realistic values of parameters for the root gas permeability and rates of CO2 production and diffusion in submerged soil. Depletion of CO2 around the roots will have consequences for the chemistry of the rice rhizosphere and the extent of the root-induced pH changes and other changes listed above. In continuing work we are investigating the implications for the solubility and root uptake of soil Zn, deficiency of which is a widespread constraint to rice growth.

Microbial Nursery Production of High-Quality Biological Soil Crust Biomass for Restoration of Degraded Dryland Soils.

PubMed

Velasco Ayuso, Sergio; Giraldo Silva, Ana; Nelson, Corey; Barger, Nichole N; Garcia-Pichel, Ferran

2017-02-01

Biological soil crusts (biocrusts) are slow-growing, phototroph-based microbial assemblages that develop on the topsoils of drylands. Biocrusts help maintain soil fertility and reduce erosion. Because their loss through human activities has negative ecological and environmental health consequences, biocrust restoration is of interest. Active soil inoculation with biocrust microorganisms can be an important tool in this endeavor. We present a culture-independent, two-step process to grow multispecies biocrusts in open greenhouse nursery facilities, based on the inoculation of local soils with local biocrust remnants and incubation under seminatural conditions that maintain the essence of the habitat but lessen its harshness. In each of four U.S. Southwest sites, we tested and deployed combinations of factors that maximized growth (gauged as chlorophyll a content) while minimizing microbial community shifts (assessed by 16S rRNA sequencing and bioinformatics), particularly for crust-forming cyanobacteria. Generally, doubling the frequency of natural wetting events, a 60% reduction in sunlight, and inoculation by slurry were optimal. Nutrient addition effects were site specific. In 4 months, our approach yielded crusts of high inoculum quality reared on local soil exposed to locally matched climates, acclimated to desiccation, and containing communities minimally shifted in composition from local ones. Our inoculum contained abundant crust-forming cyanobacteria and no significant numbers of allochthonous phototrophs, and it was sufficient to treat ca. 6,000 m 2 of degraded dryland soils at 1 to 5% of the typical crust biomass concentration, having started from a natural crust remnant as small as 6 to 30 cm 2 IMPORTANCE: Soil surface crusts can protect dryland soils from erosion, but they are often negatively impacted by human activities. Their degradation causes a loss of fertility, increased production of fugitive dust and intensity of dust storms with associated traffic problems, and provokes general public health hazards. Our results constitute an advance in the quest to actively restore biological soil covers by providing a means to obtain high-quality inoculum within a reasonable time (a few months), thereby allowing land managers to recover essential, but damaged, ecosystem services in a sustainable, self-perpetuating way as provided by biocrust communities. Copyright © 2017 American Society for Microbiology.

A greenhouse trial to investigate the ameliorative properties of biosolids and plants on physicochemical conditions of iron ore tailings: Implications for an iron ore mine site remediation.

PubMed

Cele, Emmanuel Nkosinathi; Maboeta, Mark

2016-01-01

An iron ore mine site in Swaziland is currently (2015) in a derelict state as a consequence of past (1964-1988) and present (2011 - current) iron ore mining operations. In order to control problems associated with mine wastes, the Swaziland Water Services Corporation (SWSC) recently (2013) proposed the application of biosolids in sites degraded by mining operations. It is thought that this practice could generally improve soil conditions and enhance plant reestablishment. More importantly, the SWSC foresees this as a potential solution to the biosolids disposal problems. In order to investigate the effects of biosolids and plants in soil physicochemical conditions of iron mine soils, we conducted two plant growth trials. Trial 1 consisted of tailings that received biosolids and topsoil (TUSB mix) while in trial 2, tailings received biosolids only (TB mix). In the two trials, the application rates of 0 (control), 10, 25, 50, 75 and 100 t ha(-1) were used. After 30 days of equilibration, 25 seeds of Cynodon dactylon were sown in each pot and thinned to 10 plants after 4 weeks. Plants were watered twice weekly and remained under greenhouse conditions for 12 weeks, subsequent to which soils were subjected to chemical analysis. According to the results obtained, there were significant improvements in soil parameters related to fertility such as organic matter (OM), water holding capacity (WHC), cation exchange capacity (CEC), ammonium [Formula: see text] , magnesium (Mg(2+)), calcium (Ca(2+)) and phosphorus ( [Formula: see text] ). With regard to heavy metals, biosolids led to significant increases in soil total concentrations of Cu, Zn, Cd, Hg and Pb. The higher concentrations of Zn and Cu in treated tailings compared to undisturbed adjacent soils are a cause for concern because in the field, this might work against the broader objectives of mine soil remediation, which include the recolonization of reclaimed sites by soil-dwelling organisms. Therefore, while biosolids contain important nutrients that may greatly improve physicochemical conditions and enhance vegetation reestablishment in mined soils, the threat of the build-up of higher levels of trace elements in treated tailings compared to surrounding adjacent soils must not be underestimated. Copyright © 2015 Elsevier Ltd. All rights reserved.

[Effect of trampling disturbance on soil infiltration of biological soil crusts].

PubMed

Shi, Ya Fang; Zhao, Yun Ge; Li, Chen Hui; Wang, Shan Shan; Yang, Qiao Yun; Xie, Shen Qi

2017-10-01

The effect of trampling disturbance on soil infiltration of biological soil crusts was investigated by using simulated rainfall. The results showed that the trampling disturbance significantly increased soil surface roughness. The increasing extent depended on the disturbance intensity. Soil surface roughness values at 50% disturbance increased by 91% compared with the undisturbed treatment. The runoff was delayed by trampling disturbance. A linear increase in the time of runoff yield was observed along with the increasing disturbance intensity within 20%-50%. The time of runoff yield at 50% disturbance increased by 169.7% compared with the undisturbed treatment. Trampling disturbance increased soil infiltration and consequently decreased the runoff coefficient. The cumulative infiltration amount at 50% disturbance increased by 12.6% compared with the undisturbed treatment. Soil infiltration significant decreased when biocrusts were removed. The cumulative infiltration of the treatment of biocrusts removal decreased by 30.2% compared with the undisturbed treatment. Trampling disturbance did not significantly increase the soil loss when the distur bance intensity was lower than 50%, while the biocrusts removal resulted in 10 times higher in soil erosion modulus. The trampling disturbance of lower than 50% on biocrusts might improve soil infiltration and reduce the risk of runoff, thus might improve the soil moisture without obviously increa sing the soil loss.

Enhanced degradation of spiro-insecticides and their leacher enol derivatives in soil by solarization and biosolarization techniques.

PubMed

Fenoll, José; Garrido, Isabel; Vela, Nuria; Ros, Caridad; Navarro, Simón

2017-04-01

The leaching potential of three insecticides (spirodiclofen, spiromesifen, and spirotetramat) was assessed using disturbed soil columns. Small quantities of spirodiclofen and spiromesifen were detected in leachate fraction, while spirotetramat residues were not found in the leachates. In addition, the transformation products (enol derivatives) are relatively more mobile than the parent compounds and may leach into groundwater. Moreover, the use of disinfection soil techniques (solarization and biosolarization) to enhance their degradation rates in soil was investigated. The results show that both practices achieved a reduction in the number of juvenile nematodes, enhancing in a parallel way degradation rates of the insecticides and their enol derivatives as compared with the non-disinfected soil. This behavior can be mainly attributed to the increase in soil temperature and changes in microbial activity. All insecticides showed similar behavior under solarization and biosolarization conditions. As a consequence, both agronomic techniques could be considered as suitable strategies for detoxification of soils polluted with the studied pesticides.

Nematodes Relevance in Soil Quality Management and their Significance as Biomarkers in Aquatic Substrates: Review.

PubMed

Akpheokhai, Leonard I; Oribhabor, Blessing J

2016-01-01

The interaction of man with the ecosystem is a major factor causing environmental pollution and its attendant consequences such as climate change in our world today. Patents relating to nematodes' relevance in soil quality management and their significance as biomarkers in aquatic substrates were reviewed. Nematodes are useful in rapid, easy and inexpensive method for testing the toxicity of substance (e.g. aquatic substrates). This review paper sets out to examine and discuss the issue of soil pollution, functions of nematodes in soil and aquatic substrates as well as bio-indicators in soil health management in terrestrial ecology. The information used were on the basis of secondary sources from previous research. It is abundantly clear that the population dynamics of plant parasitic or free-living nematodes have useful potentials as biomonitor for soil health and other forms of environmental contamination through agricultural activities, industrial pollution and oil spillage, and the analysis of nematode community structure could be used as complementary information obtained from conventional soil testing approaches.

Bacteria increase arid-land soil surface temperature through the production of sunscreens

DOE PAGES

Couradeau, Estelle; Karaoz, Ulas; Lim, Hsiao Chien; ...

2016-01-20

Soil surface temperature, an important driver of terrestrial biogeochemical processes, depends strongly on soil albedo, which can be significantly modified by factors such as plant cover. In sparsely vegetated lands, the soil surface can be colonized by photosynthetic microbes that build biocrust communities. Here we use concurrent physical, biochemical and microbiological analyses to show that mature biocrusts can increase surface soil temperature by as much as 10 °C through the accumulation of large quantities of a secondary metabolite, the microbial sunscreen scytonemin, produced by a group of late-successional cyanobacteria. Scytonemin accumulation decreases soil albedo significantly. Such localized warming has apparentmore » and immediate consequences for the soil microbiome, inducing the replacement of thermosensitive bacterial species with more thermotolerant forms. In conclusion, these results reveal that not only vegetation but also microorganisms are a factor in modifying terrestrial albedo, potentially impacting biosphere feedbacks on past and future climate, and call for a direct assessment of such effects at larger scales.« less

A Stand-Alone Demography and Landscape Structure Module for Earth System Models: Integration with Inventory Data from Temperate and Boreal Forests

NASA Astrophysics Data System (ADS)

Hess, L.; Basso, B.; Hinckley, E. L. S.; Robertson, G. P.; Matson, P. A.

2014-12-01

In the coming century, the proportion of total rainfall that falls in heavy storm events is expected to increase in many areas, especially in the US Midwest, a major agricultural region. These changes in rainfall patterns may have consequences for hydrologic flow and nutrient losses, especially in agricultural soils, with potentially negative consequences for receiving ground- and surface waters. We used a tracer experiment to examine how more extreme rainfall patterns may affect the movement of water and solutes through an agricultural soil profile in the upper Midwest, and to what extent tillage may moderate these effects. Two rainfall patterns were created with 5m x 5m rainout shelters at the Kellogg Biological Station LTER site in replicated plots with either conventional tillage or no-till management. Control rainfall treatments received water 3x per week, and extreme rainfall treatments received the same total amount of water but once every two weeks, to simulate less frequent but larger storms. In April 2015, potassium bromide (KBr) was added as a conservative tracer of water flow to all plots, and Br- concentrations in soil water at 1.2m depth were measured weekly from April through July. Soil water Br- concentrations increased and peaked more quickly under the extreme rainfall treatment, suggesting increased infiltration and solute transfer to depth compared to soils exposed to control rainfall patterns. Soil water Br- also increased and peaked more quickly in no-till than in conventional tillage treatments, indicating differences in flow paths between management systems. Soil moisture measured every 15 minutes at 10, 40, and 100cm depths corroborates tracer experiment results: rainfall events simulated in extreme rainfall treatments led to large increases in deep soil moisture, while the smaller rainfall events simulated under control conditions did not. Deep soil moisture in no-till treatments also increased sooner after water application as compared to in conventional soils. Our results suggest that exposure to more extreme rainfall patterns will likely increase infiltration depth and nutrient losses in agricultural soils. In particular, soils under no-till management, which leads to development of preferential flow paths, may be particularly vulnerable to vertical nutrient losses.

Wildfire impacts on soil-water retention in the Colorado Front Range, United States

USGS Publications Warehouse

Ebel, Brian A.

2012-01-01

This work examined the plot-scale differences in soil-water retention caused by wildfire in the area of the 2010 Fourmile Canyon Fire in the Colorado Front Range, United States. We measured soil-water retention curves on intact cores and repacked samples, soil particle-size distributions, and organic matter content. Estimates were also made of plant-available water based on the soil-water retention curves. Parameters for use in soil-hydraulic property models were estimated; these parameters can be used in unsaturated flow modeling for comparing burned and unburned watersheds. The primary driver for measured differences in soil-water retention in burned and unburned soils was organic matter content and not soil-particle size distribution. The tendency for unburned south-facing soils to have greater organic matter content than unburned north-facing soils in this field area may explain why unburned south-facing soils had greater soil-water retention than unburned north-facing soils. Our results suggest that high-severity wildfire can “homogenize” soil-water retention across the landscape by erasing soil-water retention differences resulting from organic matter content, which for this site may be affected by slope aspect. This homogenization could have important implications for ecohydrology and plant succession/recovery in burned areas, which could be a factor in dictating the window of vulnerability of the landscape to flash floods and erosion that are a common consequence of wildfire.

Wildfire impacts on soil-water retention in the Colorado Front Range, United States

NASA Astrophysics Data System (ADS)

Ebel, Brian A.

2012-12-01

This work examined the plot-scale differences in soil-water retention caused by wildfire in the area of the 2010 Fourmile Canyon Fire in the Colorado Front Range, United States. We measured soil-water retention curves on intact cores and repacked samples, soil particle-size distributions, and organic matter content. Estimates were also made of plant-available water based on the soil-water retention curves. Parameters for use in soil-hydraulic property models were estimated; these parameters can be used in unsaturated flow modeling for comparing burned and unburned watersheds. The primary driver for measured differences in soil-water retention in burned and unburned soils was organic matter content and not soil-particle size distribution. The tendency for unburned south-facing soils to have greater organic matter content than unburned north-facing soils in this field area may explain why unburned south-facing soils had greater soil-water retention than unburned north-facing soils. Our results suggest that high-severity wildfire can "homogenize" soil-water retention across the landscape by erasing soil-water retention differences resulting from organic matter content, which for this site may be affected by slope aspect. This homogenization could have important implications for ecohydrology and plant succession/recovery in burned areas, which could be a factor in dictating the window of vulnerability of the landscape to flash floods and erosion that are a common consequence of wildfire.

Are different soil metals near the homes of pregnant women associated with mild and severe intellectual disability in children?

PubMed Central

MCDERMOTT, SUZANNE; BAO, WEICHAO; TONG, XIN; CAI, BO; LAWSON, ANDREW; AELION, CMARJORIE

2014-01-01

AIM We explored the association of relatively low concentrations of metals in the soil proximal to maternal residence during pregnancy, with intellectual disability. We hypothesized different metals would be associated with mild versus severe intellectual disability. METHOD We used a mixed methods design, starting with a retrospective cohort from 1996–2002, of 10 051 pregnant mothers, soil sampling in the areas where these mothers resided during pregnancy, and follow-up of their children to determine if there was an intellectual disability outcome. We tested the soil and then predicted the soil concentration at the maternal homes, and modeled the association with the severity of the child’s intellectual disability. RESULTS We found a significant positive association between mild intellectual disability and soil mercury (p=0.007). For severe intellectual disability, there was a significant positive association with the soil arsenic and lead (p=0.025). INTERPRETATION This is the first report of the differential impact of metals in soil and severity of intellectual disability in children. Soil mercury concentration in the area the mother lived during pregnancy is associated with significantly increased odds of mild intellectual disability; a combination of arsenic and lead is associated with significantly increased odds of severe intellectual disability. These associations are present when controlling for maternal, child, and neighborhood characteristics. PMID:24750016

Ground-level climate at a peatland wind farm in Scotland is affected by wind turbine operation

NASA Astrophysics Data System (ADS)

Armstrong, Alona; Burton, Ralph R.; Lee, Susan E.; Mobbs, Stephen; Ostle, Nicholas; Smith, Victoria; Waldron, Susan; Whitaker, Jeanette

2016-04-01

The global drive to produce low-carbon energy has resulted in an unprecedented deployment of onshore wind turbines, representing a significant land use change for wind energy generation with uncertain consequences for local climatic conditions and the regulation of ecosystem processes. Here, we present high-resolution data from a wind farm collected during operational and idle periods that shows the wind farm affected several measures of ground-level climate. Specifically, we discovered that operational wind turbines raised air temperature by 0.18 °C and absolute humidity (AH) by 0.03 g m-3 during the night, and increased the variability in air, surface and soil temperature throughout the diurnal cycle. Further, the microclimatic influence of turbines on air temperature and AH decreased logarithmically with distance from the nearest turbine. These effects on ground-level microclimate, including soil temperature, have uncertain implications for biogeochemical processes and ecosystem carbon cycling, including soil carbon stocks. Consequently, understanding needs to be improved to determine the overall carbon balance of wind energy.

Rapid in situ assessment for predicting soil quality using an algae-soaked disc seeding assay.

PubMed

Nam, Sun-Hwa; Moon, Jongmin; Kim, Shin Woong; Kim, Hakyeong; Jeong, Seung-Woo; An, Youn-Joo

2017-11-16

The soil quality of remediated land is altered and this land consequently exerts unexpected biological effects on terrestrial organisms. Therefore, field evaluation of such land should be conducted using biological indicators. Algae are a promising new biological indicator since they are a food source for organisms in higher soil trophic levels and easily sampled from the soil. Field evaluation of soil characteristics is preferred to be testing in laboratory conditions because many biological effects cannot be duplicated during laboratory evaluations. Herein, we describe a convenient and rapid algae-soaked disc seeding assay for assessing soil quality in the field based on soil algae. The collection of algae is easy and rapid and the method predicts the short-term quality of contaminated, remediated, and amended farm and paddy soils. The algae-soaked disc seeding assay is yet to be extensively evaluated, and the method cannot be applied to loamy sand soil in in situ evaluations. The algae-soaked disc seeding assay is recommended for prediction of soil quality in in situ evaluations because it reflects all variations in the environment. The algae-soaked disc seeding assay will help to develop management strategies for in situ evaluation.

The influence of fire history, plant species and post-fire management on soil water repellency in a Mediterranean catchment: the Mount Carmel range, Israel

NASA Astrophysics Data System (ADS)

Keesstra, Saskia; Wittenberg, Lea; Maroulis, Jerry; Malkinson, Dan; Cerdà, Artemi; Pereira, Paulo

2016-04-01

Fire is a key factor impacting soil hydrology in many Mediterranean catchments. Soil water repellency (SWR) can stimulate land degradation processes by reducing the affinity of soil and water thereby triggering a reduction in soil fertility and increasing soil and water losses (. The effects of two consequent fires (1989 and 2005) on SWR were assessed in the Carmel Mountains, Israel. Fire history, plant recovery and post-fire management were investigated as determining factors in a time dependent system. SWR was highest in the >50 years unburnt plots, where soil under Pinus halepensis is most hydrophobic. In the most disturbed soils (twice burnt), many sites have a low to absent SWR even if the soil is very dry. The dynamics and fluctuations in SWR differ in magnitude under different plant species. The areas treated with CC (chipping of charred trees) showed a much higher SWR than areas left untreated. From these insights, a conceptual model of the reaction of SWR on multiple fires was developed. KEYWORDS: Soil water repellency, WDPT, Wildfires, Vegetation recovery, post-fire management, Mediterranean.

Use of stress-hormone levels and habitat selection to assess functional connectivity of a landscape for an amphibian.

PubMed

Janin, Agnès; Léna, Jean-Paul; Deblois, Sandrine; Joly, Pierre

2012-10-01

The influence of landscape matrix on functional connectivity has been clearly established. Now methods to assess the effects of different land uses on species' movements are needed because current methods are often biased. The use of physiological parameters as indicators of the level of resistance to animal movement associated with different land uses (i.e., matrix resistance) could provide estimates of energetic costs and risks to animals migrating through the matrix. To assess whether corticosterone levels indicate matrix resistance, we conducted experiments on substrate choice and measured levels of corticosterone before and after exposure of toads (Bufo bufo) to 3 common substrates (ploughed soil, meadow, and forest litter). We expected matrix resistance and hormone levels to increase from forest litter (habitat of the toad) to meadows to ploughed soil. Adult toads had higher corticosterone levels on ploughed soil than on forest litter or meadow substrates. Hormone levels did not differ between forest litter and meadow. Toads avoided moving onto ploughed soil. Corticosterone levels in juvenile toads were not related to substrate type; however, hormone levels decreased as humidity increased. Juveniles, unlike adults, did not avoid moving over ploughed soil. The difference in responses between adult and juvenile toads may have been due to differences in experimental design (for juveniles, entire body used to measure corticosterone concentration; for adults, saliva alone); differences in the scale of sensory perception of the substrate (juveniles are much smaller than adults); or differences in cognitive processes between adult and juvenile toads. Adults probably had experience with different substrate types, whereas juveniles first emerging from the water probably did not. As a consequence, arable lands could act as ecological traps for juvenile toads. ©2012 Society for Conservation Biology.

Seasonal variation in natural abundance of δ13C and 15N in Salicornia brachiata Roxb. populations from a coastal area of India.

PubMed

Chaudhary, Doongar R; Seo, Juyoung; Kang, Hojeong; Rathore, Aditya P; Jha, Bhavanath

2018-05-01

High and fluctuating salinity is characteristic for coastal salt marshes, which strongly affect the physiology of halophytes consequently resulting in changes in stable isotope distribution. The natural abundance of stable isotopes (δ 13 C and δ 15 N) of the halophyte plant Salicornia brachiata and physico-chemical characteristics of soils were analysed in order to investigate the relationship of stable isotope distribution in different populations in a growing period in the coastal area of Gujarat, India. Aboveground and belowground biomass of S. brachiata was collected from six different populations at five times (September 2014, November 2014, January 2015, March 2015 and May 2015). The δ 13 C values in aboveground (-30.8 to -23.6 ‰, average: -26.6 ± 0.4 ‰) and belowground biomass (-30.0 to -23.1 ‰, average: -26.3 ± 0.4 ‰) were similar. The δ 13 C values were positively correlated with soil salinity and Na concentration, and negatively correlated with soil mineral nitrogen. The δ 15 N values of aboveground (6.7-16.1 ‰, average: 9.6 ± 0.4 ‰) were comparatively higher than belowground biomass (5.4-13.2 ‰, average: 7.8 ± 0.3 ‰). The δ 15 N values were negatively correlated with soil available P. We conclude that the variation in δ 13 C values of S. brachiata was possibly caused by soil salinity (associated Na content) and N limitation which demonstrates the potential of δ 13 C as an indicator of stress in plants.

Mapping freeze/thaw boundaries with SMMR data

NASA Technical Reports Server (NTRS)

Zuerndorfer, B. W.; England, A. W.; Dobson, M. C.; Ulaby, F. T.

1989-01-01

Nimbus 7 Scanning Multichannel Microwave Radiometer (SMMR) data are used to map daily freeze/thaw patterns in the upper Midwest for the Fall of 1984. The combination of a low 37 GHz radiobrightness and a negative 10.7, 18, and 37 GHz spectral gradient, Partial Derivative of Tb with Respect to f, appears to be an effective discriminant for classifying soil as frozen or thawed. The 37 GHz emissivity is less sensitive to soil moisture than are the lower frequency emissivities so that the 37 GHz radiobrightness appears to track soil surface temperature relatively well. The negative gradient for frozen ground is a consequence of volume scatter darkening at shorter microwave wavelengths. This shorter wavelength darkening is not seen in thawed moist soils.

Microbial diversity and structure are drivers of the biological barrier effect against Listeria monocytogenes in soil.

PubMed

Vivant, Anne-Laure; Garmyn, Dominique; Maron, Pierre-Alain; Nowak, Virginie; Piveteau, Pascal

2013-01-01

Understanding the ecology of pathogenic organisms is important in order to monitor their transmission in the environment and the related health hazards. We investigated the relationship between soil microbial diversity and the barrier effect against Listeria monocytogenes invasion. By using a dilution-to-extinction approach, we analysed the consequence of eroding microbial diversity on L. monocytogenes population dynamics under standardised conditions of abiotic parameters and microbial abundance in soil microcosms. We demonstrated that highly diverse soil microbial communities act as a biological barrier against L. monocytogenes invasion and that phylogenetic composition of the community also has to be considered. This suggests that erosion of diversity may have damaging effects regarding circulation of pathogenic microorganisms in the environment.

Towards Validation of SMAP: SMAPEX-4 & -5

NASA Technical Reports Server (NTRS)

Ye, Nan; Walker, Jeffrey; Wu, Xiaoling; Jackson, Thomas; Renzullo, Luigi; Merlin, Olivier; Rudiger, Christoph; Entekhabi, Dara; DeJeu, Richard; Kim, Edward

2016-01-01

The L-band (1 - 2 GHz) microwave remote sensing has been widely acknowledged as the most promising method to monitor regional to global soil moisture. Consequently, the Soil Moisture Active Passive (SMAP) satellite applied this technique to provide global soil moisture every 2 to 3 days. To verify the performance of SMAP, the fourth and fifth campaign of SMAP Experiments (SMAPEx-4 -5) were carried out at the beginning of the SMAP operational phase in the Murrumbidgee River catchment, southeast Australia. The airborne radar and radiometer observations together with ground sampling on soil moisture, vegetation water content, and surface roughness were collected in coincidence with SMAP overpasses. The SMAPEx-4 and -5 data sets will benefit to SMAP post-launch calibration andvalidation under Australian land surface conditions.

The Soil Microbiome Influences Grapevine-Associated Microbiota

PubMed Central

Zarraonaindia, Iratxe; Owens, Sarah M.; Weisenhorn, Pamela; West, Kristin; Hampton-Marcell, Jarrad; Lax, Simon; Bokulich, Nicholas A.; Mills, David A.; Martin, Gilles; Taghavi, Safiyh; van der Lelie, Daniel

2015-01-01

ABSTRACT Grapevine is a well-studied, economically relevant crop, whose associated bacteria could influence its organoleptic properties. In this study, the spatial and temporal dynamics of the bacterial communities associated with grapevine organs (leaves, flowers, grapes, and roots) and soils were characterized over two growing seasons to determine the influence of vine cultivar, edaphic parameters, vine developmental stage (dormancy, flowering, preharvest), and vineyard. Belowground bacterial communities differed significantly from those aboveground, and yet the communities associated with leaves, flowers, and grapes shared a greater proportion of taxa with soil communities than with each other, suggesting that soil may serve as a bacterial reservoir. A subset of soil microorganisms, including root colonizers significantly enriched in plant growth-promoting bacteria and related functional genes, were selected by the grapevine. In addition to plant selective pressure, the structure of soil and root microbiota was significantly influenced by soil pH and C:N ratio, and changes in leaf- and grape-associated microbiota were correlated with soil carbon and showed interannual variation even at small spatial scales. Diazotrophic bacteria, e.g., Rhizobiaceae and Bradyrhizobium spp., were significantly more abundant in soil samples and root samples of specific vineyards. Vine-associated microbial assemblages were influenced by myriad factors that shape their composition and structure, but the majority of organ-associated taxa originated in the soil, and their distribution reflected the influence of highly localized biogeographic factors and vineyard management. PMID:25805735

The soil microbiome influences grapevine-associated microbiota

DOE PAGES

Zarraonaindia, Iratxe; Owens, Sarah M.; Weisenhorn, Pamela; ...

2015-03-24

Grapevine is a well-studied, economically relevant crop, whose associated bacteria could influence its organoleptic properties. In this study, the spatial and temporal dynamics of the bacterial communities associated with grapevine organs (leaves, flowers, grapes, and roots) and soils were characterized over two growing seasons to determine the influence of vine cultivar, edaphic parameters, vine developmental stage (dormancy, flowering, preharvest), and vineyard. Belowground bacterial communities differed significantly from those aboveground, and yet the communities associated with leaves, flowers, and grapes shared a greater proportion of taxa with soil communities than with each other, suggesting that soil may serve as a bacterialmore » reservoir. A subset of soil microorganisms, including root colonizers significantly enriched in plant growth-promoting bacteria and related functional genes, were selected by the grapevine. In addition to plant selective pressure, the structure of soil and root microbiota was significantly influenced by soil pH and C:N ratio, and changes in leaf- and grape-associated microbiota were correlated with soil carbon and showed interannual variation even at small spatial scales. Diazotrophic bacteria, e.g., Rhizobiaceae and Bradyrhizobium spp., were significantly more abundant in soil samples and root samples of specific vineyards. Vine-associated microbial assemblages were influenced by myriad factors that shape their composition and structure, but the majority of organ-associated taxa originated in the soil, and their distribution reflected the influence of highly localized biogeographic factors and vineyard management.« less

Microbiome engineering: Current applications and its future.

PubMed

Foo, Jee Loon; Ling, Hua; Lee, Yung Seng; Chang, Matthew Wook

2017-03-01

Microbiomes exist in all ecosystems and are composed of diverse microbial communities. Perturbation to microbiomes brings about undesirable phenotypes in the hosts, resulting in diseases and disorders, and disturbs the balance of the associated ecosystems. Engineering of microbiomes can be used to modify structures of the microbiota and restore ecological balance. Consequently, microbiome engineering has been employed for improving human health and agricultural productivity. The importance and current applications of microbiome engineering, particularly in humans, animals, plants and soil is reviewed. Furthermore, we explore the challenges in engineering microbiome and the future of this field, thus providing perspectives and outlook of microbiome engineering. Copyright © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Soil and agronomic factors associated with cadmium accumulations in kidneys of grazing sheep.

PubMed

Morcombe, P W; Petterson, D S; Ross, P J; Edwards, J R

1994-12-01

Mean concentration of cadmium (Cd) in kidneys of hogget sheep from 67 flocks grazing in the Agricultural Region of Western Australia was tested for association with soil, pastoral, climatic and nutritional factors. Hoggets grazing pastures on acidic soils and soils with a sandy-textured surface had higher Cd concentrations in kidneys than hoggets grazing pastures on more alkaline soils or soils with a clay-textured surface. Application of more than 100 kg of phosphatic fertiliser during the past 3 years to loamy soils was also associated with greater Cd concentration in kidneys of the grazing animals.

The dielectric properties of soil-water mixtures at microwave frequencies

NASA Technical Reports Server (NTRS)

Wang, J. R.

1979-01-01

Recent measurements on the dielectric constants of soil-water mixtures show the existence of two frequency regions in which the dielectric behavior of these mixtures was quite different. At the frequencies of 1.4 GHz to 5 GHz, there were strong evidences that the variations of the dielectric (epsilon) with water content (W) depended on soil type. While the real part of epsilon for sandy soils rose rapidly with the increase in W, epsilon for the high-clay content soils rose only slowly with W. As a consequence, epsilon was generally higher for the sandy soils than for the high-clay content soils at a given W. On the other hand, most of the measurements at frequencies 1 GHz indicated the increase of epsilon with W independent of soil types. At a given W, epsilon' (sandy soil) approximately equals epsilon (high-clay content soil) within the precision of the measurements. These observational features can be satisfactorily interpreted in terms of a simple dielectric relaxation model, with an appropriate choice of the mean relaxation frequency f(m) and the range of the activation energy (beta). It was found that smaller f(m) and larger beta were required for the high-clay content soils than the sandy soils in order to be consistent with the measured data.

Land use alters the resistance and resilience of soil food webs to drought

USGS Publications Warehouse

de Vries, Franciska T.; Liiri, Mira E.; Bjørnlund, Lisa; Bowker, Matthew A.; Christensen, Søren; Setälä, Heikki; Bardgett, Richard D.

2012-01-01

Soils deliver several ecosystem services including carbon sequestration and nutrient cycling, which are of central importance to climate mitigation and sustainable food production. Soil biota play an important role in carbon and nitrogen cycling, and, although the effects of land use on soil food webs are well documented the consequences for their resistance and resilience to climate change are not known. We compared the resistance and resilience to drought--which is predicted to increase under climate change of soil food webs of two common land-use systems: intensively managed wheat with a bacterial-based soil food web and extensively managed grassland with a fungal-based soil food web. We found that the fungal-based food web, and the processes of C and N loss it governs, of grassland soil was more resistant, although not resilient, and better able to adapt to drought than the bacterial-based food web of wheat soil. Structural equation modelling revealed that fungal-based soil food webs and greater microbial evenness mitigated C and N loss. Our findings show that land use strongly affects the resistance and resilience of soil food webs to climate change, and that extensively managed grassland promotes more resistant, and adaptable, fungal-based soil food webs.

Biofertilization and Biocontrol in the fight against soilborne fungal root pathogens in Australian soils

NASA Astrophysics Data System (ADS)

Cooper, Sarah; Agnew, Linda; Pereg, Lily

2015-04-01

Control of soilborne fungal root pathogens that severely compromise cotton production and other crops worldwide has historically been through the use of synthetic fungicides and fertilizers, these often have hazardous implications for environmental and soil health. The search for sustainable alternatives has lead to heightened interest in biocontrol, using soil microorganisms that suppress the growth of phytopathogens directly and biofertilization, the use of microorganisms to increasing the nutrient availability in soils, increasing seedling vigour. Soil properties and consequently soil microbial properties are strongly impacted by agricultural practices, therefore we are isolating indigenous microorganisms from soils collected from ten different geographical locations within the Australian cotton-growing region. These differ vastly in soil type and management practices. Soils are being analysed to compare the abundance of phosphate solubilising, auxin producing and nitrogen cycling bacteria. Rhizospheric bacteria capable of plant growth promoting through a multiple actions are being isolated. In addition, a method for isolating soilborne fungal suppressive microbes directly from soil samples has been designed and is currently being used. Comparisons between agricultural practices and the plant growth promoting microbial component of soil microbiome will be reported on. We will discuss the microbial isolates identified, their modes of action and their potential use as biocontrol agents and/or biofertilizers in Australian cotton growing soils.

Combination of microbial oxidation and biogenic schwertmannite immobilization: A potential remediation for highly arsenic-contaminated soil.

PubMed

Yang, Zhihui; Wu, Zijian; Liao, Yingping; Liao, Qi; Yang, Weichun; Chai, Liyuan

2017-08-01

Here, a novel strategy that combines microbial oxidation by As(III)-oxidizing bacterium and biogenic schwertmannite (Bio-SCH) immobilization was first proposed and applied for treating the highly arsenic-contaminated soil. Brevibacterium sp. YZ-1 isolated from a highly As-contaminated soil was used to oxidize As(III) in contaminated soils. Under optimum culture condition for microbial oxidation, 92.3% of water-soluble As(III) and 84.4% of NaHCO 3 -extractable As(III) in soils were removed. Bio-SCH synthesized through the oxidation of ferrous sulfate by Acidithiobacillus ferrooxidans immobilize As(V) in the contaminated soil effectively. Consequently, the combination of microbial oxidation and Bio-SCH immobilization performed better in treating the highly As-contaminated soil with immobilization efficiencies of 99.3% and 82.6% for water-soluble and NaHCO 3 -extractable total As, respectively. Thus, the combination can be considered as a green remediation strategy for developing a novel and valuable solution for As-contaminated soils. Copyright © 2017 Elsevier Ltd. All rights reserved.

Impact of seasonal variation on soil bacterial diversity and ecosystem functioning

NASA Astrophysics Data System (ADS)

Amoo, Adenike Eunice; Oluranti Babalola, Olubukola

2017-04-01

Soil biodiversity boosts the functioning of the ecosystem thereby contributing to the provision of various ecosystem services. Understanding the link between biodiversity and ecosystem functioning and their reaction to environmental heterogeneity can maximize the contribution of soil microbes to ecosystem services. The diversity, abundance and function of microorganisms can be altered by seasonal variation. There is a dearth of information on how soil biodiversity respond to environmental changes. The impact of seasonal variation on bacterial communities and its effects on soil functioning in four South African forests was investigated. The samples were analysed for pH, moisture content, total carbon and nitrogen, soil nitrate and extractable phosphate. High-throughput sequencing and quantitative PCR were used to determine the diversity and abundance of bacteria. Community level physiological profiles (CLPPs) were measured using the MicroResp™ method. Enzyme activities were additionally used as proxy for ecosystem functions. The functional genes for nitrification and phosphate solubilisation were also measured. Seasonal variation has strong effects on bacterial communities and consequently soil processes. A reduction in biodiversity has direct results on soil ecosystem functioning.

The response of soil biota to phosphate fertilization in grassland columns

NASA Astrophysics Data System (ADS)

Ikoyi, Israel; Winstanley, Henry; Fowler, Andrew; Schmalenberger, Achim

2017-04-01

The United Nations has predicted that food production is expected to rise by 50% in the year 2020 to feed the increasing world population. Grasslands play significant roles in food production and occupy about 70% of the world's agricultural land. However, intensive use of inorganic fertilizers often associated with increased food production can lead to poor soil quality and environmental pollution. For instance, excessive phosphorus (P) application can lead to eutrophication in surface waters. Although P plays vital roles in many metabolic processes in plants, its primary source rock phosphate is finite. Consequently, the development of more P efficient agricultural systems is paramount. P cycling within the microbial biomass is essential to the P cycle within the soil with its key pathways for P mobilization and mineralization from various soil pools into plant available forms. In this study, soil columns were setup in a greenhouse using a P deficient Irish soil (P index 1). The columns were planted with Lolium perenne and fertilized with 0, 5, 10 and 20 kg/ha inorganic P representing control, low, medium and high rates respectively alongside a full complement of other nutrients. Each treatment was replicated six times and managed for 14 weeks. Results after 14 weeks showed that the weekly measurements of phosphate at different soil depths identified only traces of P in soil solution for the duration of 14 weeks, even after P application. There was a significant increase in alkaline and acid phosphatase activities with the high P compared to the control but no significant effect on plant shoot and root biomass, abundances of cultivable calcium phosphate-, phytate- and phosphonate-utilizing bacteria upon P fertilization. L. perenne rhizosphere of the highest P treatment had significantly lower abundance of bacterial phoD genes, mycorrhizal hyphal and arbuscular colonization rates compared to the control. Likewise, the abundance of bacterial- and fungal-feeding nematodes, enrichment index were significantly higher in the control compared to the P treatments. In addition, denaturing gradient gel electrophoresis analysis showed that high and medium P significantly shifted the bacterial, fungal and Glomeromycota community structures compared to the control. The Next Generation Sequencing data revealed that the control had a significantly higher abundance of certain bacterial families when compared to the high P treatment (e.g. Bacillaceae, Paenibacillaceae, Nocardioidaceea, Micrococcaceae, Bradyrhizobiaceae) that have been associated with P mineralization in the past. Our results show that some of the parameters are more sensitive to P application though the effect on others may have been masked by the low P status of the soil. Results from this study suggest that a positive effect of a single inorganic P fertilizer application on plant growth in a soil is largely cancelled out by its negative effect on the soil microbiota. These findings support the hypothesis that soil microbiota play an important role in plant P supply in low P index soils. The findings from this study will be included in a mathematical model on biotic P cycling to better predict the effects of fertilizer application in grassland agriculture.

Diflerent formulations of microbial respiratory losses and microbial efficiency have pronounced short and long term consequences for soil C dynamics and soil respiration

NASA Astrophysics Data System (ADS)

Ballantyne, F.; Billings, S. A.

2016-12-01

Much of the variability in projections of Earth's future C balance derives from uncertainty in how to formulate and parameterize models of biologically mediated transformations of soil organic C (SOC). Over the past decade, models of belowground decomposition have incorporated more realism, namely microbial biomass and exoenzyme pools, but it remains unclear whether microbially mediated decomposition is accurately formulated. Different models and different assumptions about how microbial efficiency, defined in terms of respiratory losses, varies with temperature exert great influence on SOC and CO2 flux projections for the future. Here, we incorporate a physiologically realistic formulation of CO2 loss from microbes, distinct from extant formulations and logically consistent with microbial C uptake and losses, into belowground dynamics and contrast its projections for SOC pools and CO2 flux from soils to those from the phenomenological formulations of efficiency in current models. We quantitatively describe how short and long term SOC dynamics are influenced by different mathematical formulations of efficiency, and that our lack of knowledge regarding loss rates from SOC and microbial biomass pools, specific respiration rate and maximum substrate uptake rate severely constrains our ability to confidently parameterize microbial SOC modules in Earth System Models. Both steady-state SOC and microbial biomass C pools, as well as transient responses to perturbations, can differ substantially depending on how microbial efficiency is derived. In particular, the discrepancy between SOC stocks for different formulations of efficiency varies from negligible to more than two orders of magnitude, depending on the relative values of respiratory versus non-respiratory losses from microbial biomass. Mass-specific respiration and proportional loss rates from soil microbes emerge as key determinants of the consequences of different formulations of efficiency for C flux in soils.

Colonization and community structure of root-associated microorganisms of Sabina vulgaris with soil depth in a semiarid desert ecosystem with shallow groundwater.

PubMed

Taniguchi, Takeshi; Usuki, Hiroyuki; Kikuchi, Junichi; Hirobe, Muneto; Miki, Naoko; Fukuda, Kenji; Zhang, Guosheng; Wang, Linhe; Yoshikawa, Ken; Yamanaka, Norikazu

2012-08-01

Arbuscular mycorrhizal fungi (AMF) have been observed in deep soil layers in arid lands. However, change in AMF community structure with soil depth and vertical distributions of the other root-associated microorganisms are unclear. Here, we examined colonization by AMF and dark septate fungi (DSF), as well as the community structure of AMF and endophytic fungi (EF) and endophytic bacteria (EB) in association with soil depth in a semiarid desert with shallow groundwater. Roots of Sabina vulgaris and soils were collected from surface to groundwater level at 20-cm intervals. Soil chemistry (water content, total N, and available P) and colonization of AMF and DSF were measured. Community structures of AMF, EF, and EB were examined by terminal restriction fragment length polymorphism analysis. AMF colonization decreased with soil depth, although it was mostly higher than 50%. Number of AMF phylotypes decreased with soil depth, but more than five phylotypes were observed at depths up to 100 cm. Number of AMF phylotypes had a significant and positive relationship with soil moisture level within 0-15% of soil water content. DSF colonization was high but limited to soil surface. Number of phylotypes of EF and EB were diverse even in deep soil layers, and the community composition was associated with the colonization and community composition of AMF. This study indicates that AMF species richness in roots decreases but is maintained in deep soil layers in semiarid regions, and change in AMF colonization and community structure associates with community structure of the other root-associated microorganisms.

Grapevine rootstocks shape underground bacterial microbiome and networking but not potential functionality.

PubMed

Marasco, Ramona; Rolli, Eleonora; Fusi, Marco; Michoud, Grégoire; Daffonchio, Daniele

2018-01-03

The plant compartments of Vitis vinifera, including the rhizosphere, rhizoplane, root endosphere, phyllosphere and carposphere, provide unique niches that drive specific bacterial microbiome associations. The majority of phyllosphere endophytes originate from the soil and migrate up to the aerial compartments through the root endosphere. Thus, the soil and root endosphere partially define the aerial endosphere in the leaves and berries, contributing to the terroir of the fruit. However, V. vinifera cultivars are invariably grafted onto the rootstocks of other Vitis species and hybrids. It has been hypothesized that the plant species determines the microbiome of the root endosphere and, as a consequence, the aerial endosphere. In this work, we test the first part of this hypothesis. We investigate whether different rootstocks influence the bacteria selected from the surrounding soil, affecting the bacterial diversity and potential functionality of the rhizosphere and root endosphere. Bacterial microbiomes from both the root tissues and the rhizosphere of Barbera cultivars, both ungrafted and grafted on four different rootstocks, cultivated in the same soil from the same vineyard, were characterized by 16S rRNA high-throughput sequencing. To assess the influence of the root genotype on the bacterial communities' recruitment in the root system, (i) the phylogenetic diversity coupled with the predicted functional profiles and (ii) the co-occurrence bacterial networks were determined. Cultivation-dependent approaches were used to reveal the plant-growth promoting (PGP) potential associated with the grafted and ungrafted root systems. Richness, diversity and bacterial community networking in the root compartments were significantly influenced by the rootstocks. Complementary to a shared bacterial microbiome, different subsets of soil bacteria, including those endowed with PGP traits, were selected by the root system compartments of different rootstocks. The interaction between the root compartments and the rootstock exerted a unique selective pressure that enhanced niche differentiation, but rootstock-specific bacterial communities were still recruited with conserved PGP traits. While the rootstock significantly influences the taxonomy, structure and network properties of the bacterial community in grapevine roots, a homeostatic effect on the distribution of the predicted and potential functional PGP traits was found.

Carbon combustion in boreal black spruce and jack pine stands of the Northwest Territories, Canada

NASA Astrophysics Data System (ADS)

Walker, X. J.; Baltzer, J. L.; Cumming, S.; Day, N.; Goetz, S. J.; Johnstone, J. F.; Rogers, B. M.; Turetsky, M. R.; Mack, M. C.

2017-12-01

Increased fire frequency, extent, and severity is expected to strongly impact the structure and function of northern ecosystems. One of the most important functions of the boreal forest is its ability to sequester and store carbon (C). Increases in combustion of vegetation and organic soils, associated with an intensifying fire regime, could shift this biome across a C cycle threshold: from net accumulation of C from the atmosphere over multiple fire cycles, to a net loss, which in turn would cause a positive feedback to climate warming. In order for this shift to occur, fires would have to release old carbon that escaped combustion in one or more previous fires. In this study, we examined boreal black spruce and jack pine forests that burned during the 2014 fire season in the Northwest Territories, Canada. We assessed both aboveground and soil organic layer (SOL) combustion, with the goal of determining how fire weather, site environmental conditions, and pre-fire stand characteristics affect total C emissions. On average 3.35 Kg C /m2 was combusted and almost 90% of this can be attributed to combustion of the SOL. Our results indicate that the greatest carbon combustion occurs at mature black spruce sites in intermediately drained landscape positions and that variables associated with fire weather and date of burn are not important predictors of C combustion. We then used radiocarbon dating of the residual soil organic layer to determine the maximum age of soil C lost. Dates of the residual surface organic layers in a low ( 5 cm) and high ( 17 cm) severity burn were approximately 1995 and 1900, respectively. These preliminary results indicate that our metrics of burn depth are related to age of the soil C lost and suggest that high severity burns can result in combustion of old C. Using these data, we aim to determine if there are ecosystem, landscape, or regional controls that either facilitate or protect old C loss from combustion. Estimating changes in C combustion and C storage is essential for assessing the consequences of an altered fire regime on permafrost dynamics, vegetation regeneration, and the initiation of successional trajectories in boreal ecosystems.

Eco-physiological characteristics and variation in water source use between montane Douglas-Fir and lodgepole pine trees in southwestern Alberta

NASA Astrophysics Data System (ADS)

Andrews, S.; Flanagan, L. B.

2009-12-01

Winter weather on the Canadian prairies is now warmer and drier than 50 years ago and this has implications for soil water re-charge in montane ecosystems with consequences for tree and ecosystem function. We used measurements of the hydrogen isotope ratio of tree stem water to analyze the use of different water sources (winter snow melt, ground water, summer precipitation) in two montane forest sites, one dominated by Douglas-Fir and the other dominated by lodgepole pine trees. On average during the growing season (May-October) stem water in both Douglas-Fir and lodgepole pine trees was composed of 60% summer precipitation. However, during late summer Douglas-Fir trees showed an increased use of ground water as summer precipitation was minimal and ground water was accessible at the bottom of a relatively large soil reservoir. The low summer precipitation and reduced soil water availability in the shallow soils at the lodgepole pine site resulted in severely reduced photosynthetic capacity in late summer. Increased precipitation during the autumn resulted in recovery of photosynthetic gas exchange in lodgepole pine before winter dormancy was induced by low temperatures. Stomatal limitation of photosynthesis, as estimated from measurements of the carbon isotope composition of leaf tissue, was higher in Douglas-Fir than lodgepole pine. This was also associated with lower midday water potential values in Douglas-Fir and sapwood cross-sectional area that was only 70% of that measured in lodgepole pine. The vulnerability of xylem to loss of conductivity with declines in water potential was very similar between the two species. However, midday water potential in Douglas-Fir approached values where cavitation and loss of conductivity were apparent, while in lodgepole pine midday water potential was always much higher than the point at which loss of hydraulic conductivity occurred. These data suggest that, despite the presence of Douglas-Fir on deeper and higher quality soils, lodgepole pine appears to have eco-physiological characteristics that allow it to better withstand and recover from exposure to summer water deficits that may increase in association with trends to warmer and drier conditions.

Landscape effects of wildfire on permafrost distribution in interior Alaska derived from remote sensing

USGS Publications Warehouse

Brown, Dana R. N.; Jorgenson, M. Torre; Kielland, Knut; Verbyla, David L.; Prakash, Anupma; Koch, Joshua C.

2016-01-01

Climate change coupled with an intensifying wildfire regime is becoming an important driver of permafrost loss and ecosystem change in the northern boreal forest. There is a growing need to understand the effects of fire on the spatial distribution of permafrost and its associated ecological consequences. We focus on the effects of fire a decade after disturbance in a rocky upland landscape in the interior Alaskan boreal forest. Our main objectives were to (1) map near-surface permafrost distribution and drainage classes and (2) analyze the controls over landscape-scale patterns of post-fire permafrost degradation. Relationships among remote sensing variables and field-based data on soil properties (temperature, moisture, organic layer thickness) and vegetation (plant community composition) were analyzed using correlation, regression, and ordination analyses. The remote sensing data we considered included spectral indices from optical datasets (Landsat 7 Enhanced Thematic Mapper Plus (ETM+) and Landsat 8 Operational Land Imager (OLI)), the principal components of a time series of radar backscatter (Advanced Land Observing Satellite—Phased Array type L-band Synthetic Aperture Radar (ALOS-PALSAR)), and topographic variables from a Light Detection and Ranging (LiDAR)-derived digital elevation model (DEM). We found strong empirical relationships between the normalized difference infrared index (NDII) and post-fire vegetation, soil moisture, and soil temperature, enabling us to indirectly map permafrost status and drainage class using regression-based models. The thickness of the insulating surface organic layer after fire, a measure of burn severity, was an important control over the extent of permafrost degradation. According to our classifications, 90% of the area considered to have experienced high severity burn (using the difference normalized burn ratio (dNBR)) lacked permafrost after fire. Permafrost thaw, in turn, likely increased drainage and resulted in drier surface soils. Burn severity also influenced plant community composition, which was tightly linked to soil temperature and moisture. Overall, interactions between burn severity, topography, and vegetation appear to control the distribution of near-surface permafrost and associated drainage conditions after disturbance.

Restoration of contaminated soils in abandoned mine areas (Tuscany, Italy)

NASA Astrophysics Data System (ADS)

Bini, Claudio; Wahsha, Mohammad

2016-04-01

In Italy ore research and exploitation have been nearly exhausted since the end of the last century, and have left on the land a huge amount of mine waste, therefore provoking evident environmental damage including surface and groundwater, soils, vegetation and the food chain, and a potential threat to human health. The main processes occurring at these sites are: rock disgregation, fragments migration, dust dispersion, oxidation (Eh>250mV), acidification (pH<7), hydrolisis and metal leaching, precipitation of oxides and sulphates. The restoration of these sites, therefore, is a primary objective, in order to reduce/eliminate the risk associated to the contamination sources of past activities, and the consequent environmental and human health hazard. The increasing environmental consciousness of general population compelled Public Administrators to set down effective legislation acts on this subject (e.g. D.L. 152/2006), and more generally on environmental contamination. In this work we present the results of a survey carried out at several mixed sulphides mine sites in Tuscany, exploited for at least a millennium, and closed in the last century. Biogeochemical analyses carried out on representative soil profiles (Spolic Technosols) and vegetation in the proximal and distal areas of ore exploitation show heavy metal concentrations (Cd, Cu, Fe, Pb, Zn) overcoming legislation limits on average. Ni, Cr and Mn concentrations, instead, are generally below the reference levels. The results obtained suggest that the abandoned mine sites represent actual natural laboratories where to experiment new opportunities for restoration of anthropogenically contaminated areas, and to study new pedogenetic trends from these peculiar parent materials. Moreover, plants growing on these substrates are genetically adapted to metal-enriched soils, and therefore may be utilized in phytoremediation of contaminated sites. Furthermore, the institution of natural parks in these areas could enhance their educational and scientific value, contributing in the meantime to general population amusement and recreation. Finally, it is the occasion for soil scientists to submit to the scientific community new classification proposals of this new kind of soils. Key-words: mine waste, heavy metals, phytoremediation, soil genesis, soil classification

Faster turnover of new soil carbon inputs under increased atmospheric CO2.

PubMed

van Groenigen, Kees Jan; Osenberg, Craig W; Terrer, César; Carrillo, Yolima; Dijkstra, Feike A; Heath, James; Nie, Ming; Pendall, Elise; Phillips, Richard P; Hungate, Bruce A

2017-10-01

Rising levels of atmospheric CO 2 frequently stimulate plant inputs to soil, but the consequences of these changes for soil carbon (C) dynamics are poorly understood. Plant-derived inputs can accumulate in the soil and become part of the soil C pool ("new soil C"), or accelerate losses of pre-existing ("old") soil C. The dynamics of the new and old pools will likely differ and alter the long-term fate of soil C, but these separate pools, which can be distinguished through isotopic labeling, have not been considered in past syntheses. Using meta-analysis, we found that while elevated CO 2 (ranging from 550 to 800 parts per million by volume) stimulates the accumulation of new soil C in the short term (<1 year), these effects do not persist in the longer term (1-4 years). Elevated CO 2 does not affect the decomposition or the size of the old soil C pool over either temporal scale. Our results are inconsistent with predictions of conventional soil C models and suggest that elevated CO 2 might increase turnover rates of new soil C. Because increased turnover rates of new soil C limit the potential for additional soil C sequestration, the capacity of land ecosystems to slow the rise in atmospheric CO 2 concentrations may be smaller than previously assumed. © 2017 John Wiley & Sons Ltd.

Treatability of volatile chlorinated hydrocarbon-contaminated soils of different textures along a vertical profile by mechanical soil aeration: A laboratory test.

PubMed

Ma, Yan; Shi, Yi; Hou, Deyi; Zhang, Xi; Chen, Jiaqi; Wang, Zhifen; Xu, Zhu; Li, Fasheng; Du, Xiaoming

2017-04-01

Mechanical soil aeration is a simple, effective, and low-cost soil remediation technology that is suitable for sites contaminated with volatile chlorinated hydrocarbons (VCHs). Conventionally, this technique is used to treat the mixed soil of a site without considering the diversity and treatability of different soils within the site. A laboratory test was conducted to evaluate the effectiveness of mechanical soil aeration for remediating soils of different textures (silty, clayey, and sandy soils) along a vertical profile at an abandoned chloro-alkali chemical site in China. The collected soils were artificially contaminated with chloroform (TCM) and trichloroethylene (TCE). Mechanical soil aeration was effective for remediating VCHs (removal efficiency >98%). The volatilization process was described by an exponential kinetic function. In the early stage of treatment (0-7hr), rapid contaminant volatilization followed a pseudo-first order kinetic model. VCH concentrations decreased to low levels and showed a tailing phenomenon with very slow contaminant release after 8hr. Compared with silty and sandy soils, clayey soil has high organic-matter content, a large specific surface area, a high clay fraction, and a complex pore structure. These characteristics substantially influenced the removal process, making it less efficient, more time consuming, and consequently more expensive. Our findings provide a potential basis for optimizing soil remediation strategy in a cost-effective manner. Copyright © 2016. Published by Elsevier B.V.

Quantification of 16S gene and its relation with the CO2 emission and soil properties in areas under management of sugarcane (Saccharum spp.)

NASA Astrophysics Data System (ADS)

Moitinho, Mara Regina; da Silva Bicalho, Elton; De Bortoli Teixeira, Daniel; La Scala, Newton, Jr.

2015-04-01

A diversity of microorganisms has an essential role in the recycling of soil chemical elements, controlling, for example, the dynamics of carbon de)ion and stabilization, and consequently the patterns of soil CO2 emission. In this sense, the objectives of this study were: (i) to estimate and compare the genetic diversity of microorganisms in soils under different sugarcane (Saccharum spp.) managements using molecular techniques based on metagenomic studies, and (ii) investigate the relationship of soil CO2 emission (FCO2) with microbiological results and soil chemical and physical properties in the evaluated managements. This study was conducted in agricultural areas located in southern Brazil, in which the following sugarcane managements were used: green and burned residues management, a sugarcane area under reform, and a native forest (used as a reference of the original soil condition). FCO2, soil temperature, and soil moisture were measured over 10 days, and at the end of the measurements soil samples were taken in order to determine the physical and chemical soil properties. The determination of the diversity of soil microorganisms was carried out by means of molecular techniques based on 16S rRNA gene sequencing. The highest mean value for FCO2 (3.25 μmol m-2s-1) was observed in the sugarcane area under reform, and the lowest values (1.85 and 1.27 μmol m-2s-1) were observed respectively in the green residue management and native forest areas. This same pattern was also observed when the 16S gene was quantified. In this case, the largest number of copies of this gene was found in the sugarcane area under reform (4.3x1010 copies of 16S rRNA gene per gram of dry soil), and its smallest number of copies was found in the green residues management area (1.7x1010 copies of 16S rRNA gene per gram of dry soil). The largest number of copies of the 16S gene associated to the highest values of FCO2, both observed in the sugarcane area under reform, could be related to the biomass and microbial activity increasing, which are directly related to a good soil fertility conditions and agricultural practices (liming and harrowing), such as the area under reform evaluated in this study. This fact was confirmed by the positive correlation (r = 0.98; p < 0.0001) observed between FCO2 and the number of copies( 16S gene. FCO2 was also related to the soil moisture (r = -0.22; p < 0.05) in the area of green re(anagement, and to)

Soil Aggregate Stability and Grassland Productivity Associations in a Northern Mixed-Grass Prairie

PubMed Central

Reinhart, Kurt O.; Vermeire, Lance T.

2016-01-01

Soil aggregate stability data are often predicted to be positively associated with measures of plant productivity, rangeland health, and ecosystem functioning. Here we revisit the hypothesis that soil aggregate stability is positively associated with plant productivity. We measured local (plot-to-plot) variation in grassland community composition, plant (aboveground) biomass, root biomass, % water-stable soil aggregates, and topography. After accounting for spatial autocorrelation, we observed a negative association between % water-stable soil aggregates (0.25–1 and 1–2 mm size classes of macroaggregates) and dominant graminoid biomass, and negative associations between the % water-stable aggregates and the root biomass of a dominant sedge (Carex filifolia). However, variation in total root biomass (0–10 or 0–30 cm depths) was either negatively or not appreciably associated with soil aggregate stabilities. Overall, regression slope coefficients were consistently negative thereby indicating the general absence of a positive association between measures of plant productivity and soil aggregate stability for the study area. The predicted positive association between factors was likely confounded by variation in plant species composition. Specifically, sampling spanned a local gradient in plant community composition which was likely driven by niche partitioning along a subtle gradient in elevation. Our results suggest an apparent trade-off between some measures of plant biomass production and soil aggregate stability, both known to affect the land’s capacity to resist erosion. These findings further highlight the uncertainty of plant biomass-soil stability associations. PMID:27467598

Soil Aggregate Stability and Grassland Productivity Associations in a Northern Mixed-Grass Prairie.

PubMed

Reinhart, Kurt O; Vermeire, Lance T

2016-01-01

Soil aggregate stability data are often predicted to be positively associated with measures of plant productivity, rangeland health, and ecosystem functioning. Here we revisit the hypothesis that soil aggregate stability is positively associated with plant productivity. We measured local (plot-to-plot) variation in grassland community composition, plant (aboveground) biomass, root biomass, % water-stable soil aggregates, and topography. After accounting for spatial autocorrelation, we observed a negative association between % water-stable soil aggregates (0.25-1 and 1-2 mm size classes of macroaggregates) and dominant graminoid biomass, and negative associations between the % water-stable aggregates and the root biomass of a dominant sedge (Carex filifolia). However, variation in total root biomass (0-10 or 0-30 cm depths) was either negatively or not appreciably associated with soil aggregate stabilities. Overall, regression slope coefficients were consistently negative thereby indicating the general absence of a positive association between measures of plant productivity and soil aggregate stability for the study area. The predicted positive association between factors was likely confounded by variation in plant species composition. Specifically, sampling spanned a local gradient in plant community composition which was likely driven by niche partitioning along a subtle gradient in elevation. Our results suggest an apparent trade-off between some measures of plant biomass production and soil aggregate stability, both known to affect the land's capacity to resist erosion. These findings further highlight the uncertainty of plant biomass-soil stability associations.

Dynamics of premelted liquid films

NASA Astrophysics Data System (ADS)

Worster, Grae

2005-11-01

On small scales, surface tension forces are enormously powerful. When such forces act on every grain of a fine soil, they can move mountains, quite literally, in a process called frost heave. In fact, it is not surface tension per se but the intermolecular forces that underlie surface tension that also cause frost heave in partially solidified soils. In detail, these forces cause the premelting of solids. For example, at temperatures below 0^oC, water is solid (ice) in bulk but remains liquid in thin films adjacent to surfaces in contact with many other materials, such as silica. The intermolecular forces, such as the van der Waals force, acting between the materials on either side of an interface can cause interfacial premelting and simultaneously produce a strong normal stress across the premelted film. Whether these stresses cause large-scale motions relies significantly on the fluid mechanics of the microscopic films. I shall introduce the fundamental thermodynamic principles of premelting and illustrate its fluid mechanical consequences with simple theoretical models and experimental results. Applications of these ideas include the rejection of particulate matter during solidification, with consequences for the fabrication of composite materials, the freezing of colloidal suspensions, with consequences for the cryopreservation of biological systems, and the evolution of grain boundaries, with consequences for the redistribution of climate proxies sequestered in the Earth's ice sheets.

Functional Diversity of Fungal Communities in Soil Contaminated with Diesel Oil.

PubMed

Borowik, Agata; Wyszkowska, Jadwiga; Oszust, Karolina

2017-01-01

The widespread use and consumption of crude oil draws the public's attention to the fate of petroleum hydrocarbons in the environment, as they can permeate the soil environment in an uncontrollable manner. Contamination of soils with petroleum products, including diesel oil (DO), can cause changes in the microbiological soil properties. The effect of diesel oil on the functional diversity of fungi was tested in a model experiment during 270 days. Fungi were isolated from soil and identified. The functional diversity of fungal communities was also determined. Fungi were identified with the MALDI-TOF method, while the functional diversity was determined using FF-plates made by Biolog ® , with 95 carbon sources. Moreover, the diesel oil degradation dynamics was assessed. The research showed that soil contaminated with diesel oil is characterized by a higher activity of oxireductases and a higher number of fungi than soil not exposed to the pressure of this product. The DO pollution has an adverse effect on the diversity of fungal community. This is proved by significantly lower values of the Average Well-Color Development, substrates Richness (R) and Shannon-Weaver (H) indices at day 270 after contamination. The consequences of DO affecting soil not submitted to remediation are persistent. After 270 days, only 64% of four-ringed, 28% of five-ringed, 21% of 2-3-ringed and 16% of six-ringed PAHs underwent degradation. The lasting effect of DO on communities of fungi led to a decrease in their functional diversity. The assessment of the response of fungi to DO pollution made on the basis of the development of colonies on Petri dishes [Colony Development (CD) and Eco-physiological Diversity (EP) indices] is consistent with the analysis based on the FF MicroPlate system by Biolog ® . Thus, a combination of the FF MicroPlate system by Biolog ® with the simultaneous calculation of CD and EP indices alongside the concurrent determination of the content of PAHs and activity of oxireductases provides an opportunity to achieve relatively complete characterization of the consequences of a long-term impact of diesel oil on soil fungi.

Functional Diversity of Fungal Communities in Soil Contaminated with Diesel Oil

PubMed Central

Borowik, Agata; Wyszkowska, Jadwiga; Oszust, Karolina

2017-01-01

The widespread use and consumption of crude oil draws the public’s attention to the fate of petroleum hydrocarbons in the environment, as they can permeate the soil environment in an uncontrollable manner. Contamination of soils with petroleum products, including diesel oil (DO), can cause changes in the microbiological soil properties. The effect of diesel oil on the functional diversity of fungi was tested in a model experiment during 270 days. Fungi were isolated from soil and identified. The functional diversity of fungal communities was also determined. Fungi were identified with the MALDI-TOF method, while the functional diversity was determined using FF-plates made by Biolog®, with 95 carbon sources. Moreover, the diesel oil degradation dynamics was assessed. The research showed that soil contaminated with diesel oil is characterized by a higher activity of oxireductases and a higher number of fungi than soil not exposed to the pressure of this product. The DO pollution has an adverse effect on the diversity of fungal community. This is proved by significantly lower values of the Average Well-Color Development, substrates Richness (R) and Shannon–Weaver (H) indices at day 270 after contamination. The consequences of DO affecting soil not submitted to remediation are persistent. After 270 days, only 64% of four-ringed, 28% of five-ringed, 21% of 2–3-ringed and 16% of six-ringed PAHs underwent degradation. The lasting effect of DO on communities of fungi led to a decrease in their functional diversity. The assessment of the response of fungi to DO pollution made on the basis of the development of colonies on Petri dishes [Colony Development (CD) and Eco-physiological Diversity (EP) indices] is consistent with the analysis based on the FF MicroPlate system by Biolog®. Thus, a combination of the FF MicroPlate system by Biolog® with the simultaneous calculation of CD and EP indices alongside the concurrent determination of the content of PAHs and activity of oxireductases provides an opportunity to achieve relatively complete characterization of the consequences of a long-term impact of diesel oil on soil fungi. PMID:29021782

Is the Spatial Distribution of Mankind's Most Basic Economic Traits Determined by Climate and Soil Alone?

PubMed Central

Beck, Jan; Sieber, Andrea

2010-01-01

Background Several authors, most prominently Jared Diamond (1997, Guns, Germs and Steel), have investigated biogeographic determinants of human history and civilization. The timing of the transition to an agricultural lifestyle, associated with steep population growth and consequent societal change, has been suggested to be affected by the availability of suitable organisms for domestication. These factors were shown to quantitatively explain some of the current global inequalities of economy and political power. Here, we advance this approach one step further by looking at climate and soil as sole determining factors. Methodology/Principal Findings As a simplistic ‘null model’, we assume that only climate and soil conditions affect the suitability of four basic landuse types – agriculture, sedentary animal husbandry, nomadic pastoralism and hunting-and-gathering. Using ecological niche modelling (ENM), we derive spatial predictions of the suitability for these four landuse traits and apply these to the Old World and Australia. We explore two aspects of the properties of these predictions, conflict potential and population density. In a calculation of overlap of landuse suitability, we map regions of potential conflict between landuse types. Results are congruent with a number of real, present or historical, regions of conflict between ethnic groups associated with different landuse traditions. Furthermore, we found that our model of agricultural suitability explains a considerable portion of population density variability. We mapped residuals from this correlation, finding geographically highly structured deviations that invite further investigation. We also found that ENM of agricultural suitability correlates with a metric of local wealth generation (Gross Domestic Product, Purchasing Power Parity). Conclusions/Significance From simplified assumptions on the links between climate, soil and landuse we are able to provide good predictions on complex features of human geography. The spatial distribution of deviations from ENM predictions identifies those regions requiring further investigation of potential explanations. Our findings and methodological approaches may be of applied interest, e.g., in the context of climate change. PMID:20463959

Is the spatial distribution of mankind's most basic economic traits determined by climate and soil alone?

PubMed

Beck, Jan; Sieber, Andrea

2010-05-05

Several authors, most prominently Jared Diamond (1997, Guns, Germs and Steel), have investigated biogeographic determinants of human history and civilization. The timing of the transition to an agricultural lifestyle, associated with steep population growth and consequent societal change, has been suggested to be affected by the availability of suitable organisms for domestication. These factors were shown to quantitatively explain some of the current global inequalities of economy and political power. Here, we advance this approach one step further by looking at climate and soil as sole determining factors. As a simplistic 'null model', we assume that only climate and soil conditions affect the suitability of four basic landuse types - agriculture, sedentary animal husbandry, nomadic pastoralism and hunting-and-gathering. Using ecological niche modelling (ENM), we derive spatial predictions of the suitability for these four landuse traits and apply these to the Old World and Australia. We explore two aspects of the properties of these predictions, conflict potential and population density. In a calculation of overlap of landuse suitability, we map regions of potential conflict between landuse types. Results are congruent with a number of real, present or historical, regions of conflict between ethnic groups associated with different landuse traditions. Furthermore, we found that our model of agricultural suitability explains a considerable portion of population density variability. We mapped residuals from this correlation, finding geographically highly structured deviations that invite further investigation. We also found that ENM of agricultural suitability correlates with a metric of local wealth generation (Gross Domestic Product, Purchasing Power Parity). From simplified assumptions on the links between climate, soil and landuse we are able to provide good predictions on complex features of human geography. The spatial distribution of deviations from ENM predictions identifies those regions requiring further investigation of potential explanations. Our findings and methodological approaches may be of applied interest, e.g., in the context of climate change.

Comparing simple and complex approaches to simulate the impacts of soil water repellency on runoff and erosion in burnt Mediterranean forest slopes

NASA Astrophysics Data System (ADS)

Nunes, João Pedro; Catarina Simões Vieira, Diana; Keizer, Jan Jacob

2017-04-01

Fires impact soil hydrological properties, enhancing soil water repellency and therefore increasing the potential for surface runoff generation and soil erosion. In consequence, the successful application of hydrological models to post-fire conditions requires the appropriate simulation of the effects of soil water repellency on soil hydrology. This work compared three approaches to model soil water repellency impacts on soil hydrology in burnt eucalypt and pine forest slopes in central Portugal: 1) Daily approach, simulating repellency as a function of soil moisture, and influencing the maximum soil available water holding capacity. It is based on the Thornthwaite-Mather soil water modelling approach, and is parameterized with the soil's wilting point and field capacity, and a parameter relating soil water repellency with water holding capacity. It was tested with soil moisture data from burnt and unburnt hillslopes. This approach was able to simulate post-fire soil moisture patterns, which the model without repellency was unable to do. However, model parameters were different between the burnt and unburnt slopes, indicating that more research is needed to derive standardized parameters from commonly measured soil and vegetation properties. 2) Seasonal approach, pre-determining repellency at the seasonal scale (3 months) in four classes (from none to extreme). It is based on the Morgan-Morgan-Finney (MMF) runoff and erosion model, applied at the seasonal scale and is parameterized with a parameter relating repellency class with field capacity. It was tested with runoff and erosion data from several experimental plots, and led to important improvements on runoff prediction over an approach with constant field capacity for all seasons (calibrated for repellency effects), but only slight improvements in erosion predictions. In contrast with the daily approach, the parameters could be reproduced between different sites 3) Constant approach, specifying values for soil water repellency for the three years after the fire, and keeping them constant throughout the year. It is based on a daily Curve Number (CN) approach, and was incorporated directly in the Soil and Water Assessment Tool (SWAT) model and tested with erosion data from a burnt hillslope. This approach was able to successfully reproduce soil erosion. The results indicate that simplified approaches can be used to adapt existing models for post-fire simulation, taking repellency into account. Taking into account the seasonality of repellency seems more important to simulate surface runoff than erosion, possibly since simulating the larger runoff rates correctly is sufficient for erosion simulation. The constant approach can be applied directly in the parameterization of existing runoff and erosion models for soil loss and sediment yield prediction, while the seasonal approach can readily be developed as a next step, with further work being needed to assess if the approach and associated parameters can be applied in multiple post-fire environments.

Mobility of radionuclides and trace elements in soil from legacy NORM and undisturbed naturally 232Th-rich sites.

PubMed

Mrdakovic Popic, Jelena; Meland, Sondre; Salbu, Brit; Skipperud, Lindis

2014-05-01

Investigation of radionuclides (232Th and 238U) and trace elements (Cr, As and Pb) in soil from two legacy NORM (former mining sites) and one undisturbed naturally 232Th-rich site was conducted as a part of the ongoing environmental impact assessment in the Fen Complex area (Norway). The major objectives were to determine the radionuclide and trace element distribution and mobility in soils as well as to analyze possible differences between legacy NORM and surrounding undisturbed naturally 232Th-rich soils. Inhomogeneous soil distribution of radionuclides and trace elements was observed for each of the investigated sites. The concentration of 232Th was high (up to 1685 mg kg(-1), i.e., ∼7000 Bq kg(-1)) and exceeded the screening value for the radioactive waste material in Norway (1 Bq g(-1)). Based on the sequential extraction results, the majority of 232Th and trace elements were rather inert, irreversibly bound to soil. Uranium was found to be potentially more mobile, as it was associated with pH-sensitive soil phases, redox-sensitive amorphous soil phases and soil organic compounds. Comparison of the sequential extraction datasets from the three investigated sites revealed increased mobility of all analyzed elements at the legacy NORM sites in comparison with the undisturbed 232Th-rich site. Similarly, the distribution coefficients Kd (232Th) and Kd (238U) suggested elevated dissolution, mobility and transportation at the legacy NORM sites, especially at the decommissioned Nb-mining site (346 and 100 L kg(-1) for 232Th and 238U, respectively), while the higher sorption of radionuclides was demonstrated at the undisturbed 232Th-rich site (10,672 and 506 L kg(-1) for 232Th and 238U, respectively). In general, although the concentration ranges of radionuclides and trace elements were similarly wide both at the legacy NORM and at the undisturbed 232Th-rich sites, the results of soil sequential extractions together with Kd values supported the expected differences between sites as the consequences of previous mining operations. Hence, mobility and possible elevated bioavailability at the legacy NORM site could be expected and further risk assessment should take this into account when decisions about the possible intervention measures are made.

N2O emission from urine in the soil in the beef production in Southeast Brazil: soil moisture content and temperature effects

NASA Astrophysics Data System (ADS)

Simões Barneze, Arlete; Mancebo Mazzetto, Andre; Fernandes Zani, Caio; Siqueira Neto, Marcos; Clemente Cerri, Carlos

2014-05-01

Pasture expansion in Brazil has shown an increase in 4.5% per year, and a total cattle herd of about 200 millions in 2010. Associated to animal husbandry there are emissions of N2O (nitrous oxide) and other gases to the atmosphere. The liquid manure contributes to emitte 5% of the total N2O emissions. The urea content of cattle urine will readily hydrolyze to form ammonium after deposition to the soil. Nitrous oxide may then be emitted through the microbiological processes of nitrification and denitrification. Important factors can influence on these processes and consequently in nitrous oxide emissions, as soil water content and temperature (Bolan et al., 2004; Luo et al., 2008). The main goal of this research was to determine the soil water content and temperature influence on N2O emissions from urine depositions on the soil. In order to achieve the objective, soil incubation experiment was conducted in laboratory conditions at three levels of water-filled pore space (40%, 60% and 80% WFPS) and two temperatures (25ºC and 35ºC) with and without urine, with five replicates each. The soil used in this study was collected from the 0-10 cm layer of a grassland field in Southeast of Brazil and classified as Nitisols. For each measurement, the Kilner jar was hermetically sealed by replacing the lid and a first gas sample was immediately taken (time-zero, t0 sample) using a syringe and stored in a pre-evacuated gas vial. After 30 minutes the headspace of each jar was sampled again (time-thirty, t_30 sample). The lids were then removed and kept off until the next sampling day. Nitrous oxide concentrations in the sampled air were measured using a SRI Gas Chromatograph (Model 8610C). Gas fluxes were calculated by fitting linear regressions through the data collected at t0 and t_30 and were corrected for temperature and amount of soil incubated. Gas measurements were carried out up to 55 days. To determine the statistical significance, Tukey tests were carried out at 0.05 probability level. Nitrogen mineralization and nitri?cation were higher at the higher temperature and higher soil water content. Significant effects of urine application and moisture were found (P

The soil-water balance simulations of a grassland in response to CO2, rainfall, and biodiversity manipulations at BioCON

NASA Astrophysics Data System (ADS)

Flinker, R. H.; Cardenas, M.; Caldwell, T. G.; Rich, R.; Reich, P.

2013-12-01

The BioCON (Biodiversity, CO2 and N) experiment has been continuously running since 1997. Operated by the University of Minnesota and located within the Cedar Creek Ecosystem Science Reserve in Minnesota, USA, BioCON is a Free-Air CO2 Enrichment (FACE) experiment that investigates plant community response to three key environmental variables: nitrogen, atmospheric CO2 and biodiversity. More recently rainfall exclusion and temperature manipulation were added to the experiment which amounts to 371 plots. The site attempts to replicate predicted average temperature increases and a northern shift of plant species and any associated consequences. FACE experiments have been conducted for a number of years in different countries, but the focus has generally been on how plant communities, soil respiration and microbes respond. Minimal work has been focused on the hydrologic aspects of these experiments which are potentially valuable for investigating global warming effects on local and plot-scale ecohydrology. Thus, the objective of this work is to characterize and model unsaturated flow for different CO2 and rainfall treatments in order to see how they affect soil moisture dynamics and groundwater recharge on grasslands of central Minnesota. Our study focuses on simulating soil moisture dynamics in eighteen of the BioCON plots: six bare plots with regular rainfall regimes (zero plant species, three plots with elevated atmospheric CO2 levels), six regular rainfall regimes (nine plant species, three plots with elevated atmospheric CO2 levels) and six reduced rainfall regimes (nine plant species, three plots with elevated atmospheric CO2 levels). The Simultaneous Heat and Water (SHAW) model, which solves the Richards equation for unsaturated zone water flow coupled to a comprehensive energy balance model, was parameterized with a combination of field and lab estimates of soil properties. Field estimates of saturated hydraulic conductivity using tension infiltrometers ranged from 9.8 x 10-4 to 6.7 x 10-3 cm/s. Soil cores were collected and analyzed for soil hydraulic properties (texture, unsaturated hydraulic conductivity and moisture retention). From the grain size analyzes of soil samples collected every 10 cm until 1m depth, the soil is homogenous and on average 87% sand, 11% silt and 2% clay. We will be presenting results from the simulations and statistical comparisons to observations of soil moisture at four depths in each plot.

High natural erosion rates are the backdrop for present-day soil erosion in the agricultural Middle Hills of Nepal

NASA Astrophysics Data System (ADS)

West, A. J.; Arnold, M.; AumaItre, G.; Bourles, D. L.; Keddadouche, K.; Bickle, M.; Ojha, T.

2015-07-01

Although agriculturally accelerated soil erosion is implicated in the unsustainable environmental degradation of mountain environments, such as in the Himalaya, the effects of land use can be challenging to quantify in many mountain settings because of the high and variable natural background rates of erosion. In this study, we present new long-term denudation rates, derived from cosmogenic 10Be analysis of quartz in river sediment from the Likhu Khola, a small agricultural river basin in the Middle Hills of central Nepal. Calculated long-term denudation rates, which reflect background natural erosion processes over 1000+ years prior to agricultural intensification, are similar to present-day sediment yields and to soil loss rates from terraces that are well maintained. Similarity in short- and long-term catchment-wide erosion rates for the Likhu is consistent with data from elsewhere in the Nepal Middle Hills but contrasts with the very large increases in short-term erosion rates seen in agricultural catchments in other steep mountain settings. Our results suggest that the large sediment fluxes exported from the Likhu and other Middle Hills rivers in the Himalaya are derived in large part from natural processes, rather than from soil erosion as a result of agricultural activity. Catchment-scale erosional fluxes may be similar over short and long timescales if both are dominated by mass wasting sources such as gullies, landslides, and debris flows (e.g., as is evident in the landslide-dominated Khudi Khola of the Nepal High Himalaya, based on compiled data). As a consequence, simple comparison of catchment-scale fluxes will not necessarily pinpoint land use effects on soils where these are only a small part of the total erosion budget, unless rates of mass wasting are also considered. Estimates of the mass wasting contribution to erosion in the Likhu imply catchment-averaged soil production rates on the order of ~ 0.25-0.35 mm yr-1, though rates of mass wasting are poorly constrained. The deficit between our best estimates for soil production rates and measurements of soil loss rates supports conclusions from previous studies that terraced agriculture in the Likhu may not be associated with a large systematic soil deficit, at least when terraces are well maintained, but that poorly managed terraces, forest, and scrubland may lead to rapid depletion of soil resources.

Applying data mining methods to the assessment of soil contamination and carbon sequestration under Mediterranean Climate. The case study of Guadiamar basin (SW Spain).

NASA Astrophysics Data System (ADS)

Muñoz Vallés, Sara; Pino-Mejías, Rafael; Blanco-Velázquez, Francisco J.; Anaya-Romero, María

2017-04-01

In the present background of increasing access to vast datasets of soil and environmental records, the application of the newest analytical techniques and approaches for modelling offer excellent opportunities to define recommendations and simulate processes for land degradation and management. In this regard, data mining techniques have been successfully applied in different fields of environmental sciences, performing an innovative tool to explore relevant questions and providing valuable results and useful applications through an efficient management and analysis of large and heterogeneous datasets. Soil Organic matter, pH and trace elements in soil perform close relationships, with ability to alter each other and lead to emerging, synergic properties for soils. In addition, effects associated to climate and land use change promotes mechanisms of feedback that could amplify the negative effects of soil contamination on human health, biodiversity conservation and soil ecosystem services maintenance. The aim of this study was to build and compare several data mining models for the prediction of potential and interrelated functions of soil contamination and carbon sequestration by soils. In this context, under the framework of the EU RECARE project (Preventing and Remediating degradation of Soils in Europe through Land Care), the Guadiamar valley (SW Spain) is used as case study. The area was affected by around four hm3 of acid waters and two hm3 of mud rich in heavy metals, resulting from a mine spill, in 1998, where more than 4,600 ha of agricultural and pasture land were affected. The area was subjected to a large-scale phyto-management project, and consequently protected as "Green Corridor". In this study, twenty environmental variables were taken into account and several base models for supervised classification problems were selected, including linear and quadratic discriminant analysis, logistic regression, neural networks and support vector machines. A database with a size of about 30 Mb of alfa-numeric environmental data from the Guadiamar basin was randomly split into three parts, namely training set (50%), validation set (25%), and test set (25%). The techniques were compared from the viewpoint of their accuracy, robustness of results and applicability, and the best models in terms of overall performance were identified. Finally, results were compared with priorities defined in the current regional and national regulations and policies.

The Effect of Land Use Change on Transformation of Relief and Modification of Soils in Undulating Loess Area of East Poland

PubMed Central

Rejman, Jerzy; Rafalska-Przysucha, Anna; Rodzik, Jan

2014-01-01

The change of primary forest areas into arable land involves the transformation of relief and modification of soils. In this study, we hypothesized that relatively flat loess area was largely transformed after the change of land use due to erosion. The modifications in soil pedons and distribution of soil properties were studied after 185 years of arable land use. Structure of pedons and solum depth were measured in 128 and soil texture and soil organic carbon in 39 points. Results showed that soils of noneroded and eroded profiles occupied 14 and 50%, respectively, and depositional soils 36% of the area. As a consequence, the clay, silt, and SOC concentration varied greatly in the plowed layer and subsoil. The reconstructed profiles of eroded soils and depositional soils without the accumulation were used to develop the map of past relief. The average inclination of slopes decreased from 4.3 to 2.2°, and slopes >5° vanished in the present topography. Total erosion was 23.8 Mg ha−1 year−1. From that amount, 88% was deposited within the study area, and 12% was removed outside. The study confirmed the hypothesis of the significant effect of the land use change on relief and soils in loess areas. PMID:25614883

Impact of repeated single-metal and multi-metal pollution events on soil quality.

PubMed

Burges, Aritz; Epelde, Lur; Garbisu, Carlos

2015-02-01

Most frequently, soil metal pollution results from the occurrence of repeated single-metal and, above all, multi-metal pollution events, with concomitant adverse consequences for soil quality. Therefore, in this study, we evaluated the impact of repeated single-metal and multi-metal (Cd, Pb, Cu, Zn) pollution events on soil quality, as reflected by the values of a variety of soil microbial parameters with potential as bioindicators of soil functioning. Specifically, parameters of microbial activity (potentially mineralizable nitrogen, β-glucosidase and acid phosphatase activity) and biomass (fungal and bacterial gene abundance by RT-qPCR) were determined, in the artificially metal-polluted soil samples, at regular intervals over a period of 26 weeks. Similarly, we studied the evolution over time of CaCl2-extractable metal fractions, in order to estimate metal bioavailability in soil. Different metals showed different values of bioavailability and relative bioavailability ([metal]bio/[metal]tot) in soil throughout the experiment, under both repeated single-metal and multi-metal pollution events. Both repeated Zn-pollution and multi-metal pollution events led to a significant reduction in the values of acid phosphatase activity, and bacterial and fungal gene abundance, reflecting the negative impact of these repeated events on soil microbial activity and biomass, and, hence, soil quality. Copyright © 2014 Elsevier Ltd. All rights reserved.

Impact of sources of environmental degradation on microbial community dynamics in non-polluted and metal-polluted soils.

PubMed

Epelde, Lur; Martín-Sánchez, Iker; González-Oreja, José A; Anza, Mikel; Gómez-Sagasti, María T; Garbisu, Carlos

2012-09-01

Soils are currently being degraded at an alarming rate due to increasing pressure from different sources of environmental degradation. Consequently, we carried out a 4-month microcosm experiment to measure the impact of different sources of environmental degradation (biodiversity loss, nitrogen deposition and climate change) on soil health in a non-polluted (non-degraded) and a heavily metal-polluted (degraded) soil, and to compare their responses. To this aim, we determined a variety of soil microbial properties with potential as bioindicators of soil health: basal respiration; β-glucosaminidase and protease activities; abundance (Q-PCR) of bacterial, fungal and chitinase genes; richness (PCR-DGGE) of fungal and chitinase genes. Non-polluted and metal-polluted soils showed different response microbial dynamics when subjected to sources of environmental degradation. The non-polluted soil appeared resilient to "biodiversity loss" and "climate change" treatments. The metal-polluted soil was probably already too severely affected by the presence of high levels of toxic metals to respond to other sources of stress. Our data together suggests that soil microbial activity and biomass parameters are more sensitive to the applied sources of environmental degradation, showing immediate responses of greater magnitude, while soil microbial diversity parameters do not show such variations. Copyright © 2012 Elsevier B.V. All rights reserved.

Optimizing Available Phosphorus in Calcareous Soils Fertilized with Diammonium Phosphate and Phosphoric Acid Using Freundlich Adsorption Isotherm

PubMed Central

Akhtar, Muhammad

2013-01-01

In calcareous soils, phosphorus (P) retention and immobilization take place due to precipitation and adsorption. Since soil pH is considered a major soil variable affecting the P sorption, an acidic P fertilizer could result in low P adsorption compared to alkaline one. Therefore, P adsorption from DAP and phosphoric acid (PA) required to produce desired soil solution P concentration was estimated using Freundlich sorption isotherms. Two soils from Faisalabad and T. T. Singh districts were spiked with 0, 10, and 20 % CaCO3 for 15 days. Freundlich adsorption isotherms (P = aC b/a) were constructed, and theoretical doses of PA and DAP to develop a desired soil solution P level (i.e., 0.20 mg L−1) were calculated. It was observed that P adsorption in soil increased with CaCO3. Moreover, at all the levels of CaCO3, P adsorption from PA was lower compared to that from DAP in both the soils. Consequently, lesser quantity of PA was required to produce desired solution P, 0.2 mg L−1, compared to DAP. However, extrapolating the developed relationship between soil CaCO3 contents and quantity of fertilizer to other similar textured soils needs confirmation. PMID:24307878

Application of atomic force microscopy to the study of natural and model soil particles.

PubMed

Cheng, S; Bryant, R; Doerr, S H; Rhodri Williams, P; Wright, C J

2008-09-01

The structure and surface chemistry of soil particles has extensive impact on many bulk scale properties and processes of soil systems and consequently the environments that they support. There are a number of physiochemical mechanisms that operate at the nanoscale which affect the soil's capability to maintain native vegetation and crops; this includes soil hydrophobicity and the soil's capacity to hold water and nutrients. The present study used atomic force microscopy in a novel approach to provide unique insight into the nanoscale properties of natural soil particles that control the physiochemical interaction of material within the soil column. There have been few atomic force microscopy studies of soil, perhaps a reflection of the heterogeneous nature of the system. The present study adopted an imaging and force measurement research strategy that accounted for the heterogeneity and used model systems to aid interpretation. The surface roughness of natural soil particles increased with depth in the soil column a consequence of the attachment of organic material within the crevices of the soil particles. The roughness root mean square calculated from ten 25 microm(2) images for five different soil particles from a Netherlands soil was 53.0 nm, 68.0 nm, 92.2 nm and 106.4 nm for the respective soil depths of 0-10 cm, 10-20 cm, 20-30 cm and 30-40 cm. A novel analysis method of atomic force microscopy phase images based on phase angle distribution across a surface was used to interpret the nanoscale distribution of organic material attached to natural and model soil particles. Phase angle distributions obtained from phase images of model surfaces were found to be bimodal, indicating multiple layers of material, which changed with the concentration of adsorbed humic acid. Phase angle distributions obtained from phase images of natural soil particles indicated a trend of decreasing surface coverage with increasing depth in the soil column. This was consistent with previous macroscopic determination of the proportions of organic material chemically extracted from bulk samples of the soils from which specimen particles were drawn. Interaction forces were measured between atomic force microscopy cantilever tips (Si(3)N(4)) and natural soil and model surfaces. Adhesion forces at humic acid free specimen surfaces (Av. 20.0 nN), which are primarily hydrophilic and whose interactions are subject to a significant contribution from the capillary forces, were found to be larger than those of specimen surfaces with adsorbed humic acid (Av. 6.5 nN). This suggests that adsorbed humic acid increased surface hydrophobicity. The magnitude and distribution of adhesion forces between atomic force microscopy tips and the natural particle surfaces was affected by both local surface roughness and the presence of adsorbed organic material. The present study has correlated nanoscale measurements with established macroscale methods of soil study. Thus, the research demonstrates that atomic force microscopy is an important addition to soil science that permits a multiscale analysis of the multifactorial phenomena of soil hydrophobicity and wetting.

Pyrosequencing Based Microbial Community Analysis of Stabilized Mine Soils

NASA Astrophysics Data System (ADS)

Park, J. E.; Lee, B. T.; Son, A.

2015-12-01

Heavy metals leached from exhausted mines have been causing severe environmental problems in nearby soils and groundwater. Environmental mitigation was performed based on the heavy metal stabilization using Calcite and steel slag in Korea. Since the soil stabilization only temporarily immobilizes the contaminants to soil matrix, the potential risk of re-leaching heavy metal still exists. Therefore the follow-up management of stabilized soils and the corresponding evaluation methods are required to avoid the consequent contamination from the stabilized soils. In this study, microbial community analysis using pyrosequencing was performed for assessing the potential leaching of the stabilized soils. As a result of rarefaction curve and Chao1 and Shannon indices, the stabilized soil has shown lower richness and diversity as compared to non-contaminated negative control. At the phyla level, as the degree of contamination increases, most of phyla decreased with only exception of increased proteobacteria. Among proteobacteria, gamma-proteobacteria increased against the heavy metal contamination. At the species level, Methylobacter tundripaludum of gamma-proteobacteria showed the highest relative portion of microbial community, indicating that methanotrophs may play an important role in either solubilization or immobilization of heavy metals in stabilized soils.

Denitrification potential of riparian soils in relation to multiscale spatial environmental factors: a case study of a typical watershed, China.

PubMed

Wei, Jianbing; Feng, Hao; Cheng, Quanguo; Gao, Shiqian; Liu, Haiyan

2017-02-01

The objective of this study was to test the hypothesis that environmental regulators of riparian zone soil denitrification potential differ according to spatial scale within a watershed; consequently, a second objective was to provide spatial strategies for conserving and restoring the purification function of runoff in riparian ecosystems. The results show that soil denitrification in riparian zones was more heterogeneous at the profile scale than at the cross-section and landscape scales. At the profile scale, biogeochemical factors (including soil total organic carbon, total nitrogen, and nitrate-nitrogen) were the major direct regulators of the spatial distribution of soil denitrification enzyme activity (DEA). At the cross-section scale, factors included distance from river bank and vegetation density, while landscape-scale factors, including topographic index, elevation, and land use types, indirectly regulated the spatial distribution of DEA. At the profile scale, soil DEA was greatest in the upper soil layers. At the cross-section scale, maximum soil DEA occurred in the mid-part of the riparian zone. At the landscape scale, soil DEA showed an increasing trend towards downstream sites, except for those in urbanized areas.

Increasing Efficiency of Water Use in Agriculture through Management of Soil Water Repellency to Optimize Soil and Water Productivity

NASA Astrophysics Data System (ADS)

Moore, Demie; Kostka, Stan; McMillan, Mica; Gadd, Nick

2010-05-01

Water's ability to infiltrate and disperse in soils, and soil's ability to receive, transport, retain, filter and release water are important factors in the efficient use of water in agriculture. Deteriorating soil conditions, including development of soil water repellency, negatively impact hydrological processes and, consequently, the efficiency of rainfall and irrigation. Soil water repellency is increasingly being identified in diverse soils and cropping systems. Recently research has been conducted on the use of novel soil surfactants (co-formulations of alkyl polyglycoside and block copolymer surfactants) to avoid or overcome soil water repellency and enhance water distribution in soils. Results indicate that this is an effective and affordable approach to maintaining or restoring soil and water productivity in irrigated cropping systems. Results from studies conducted in Australia and the United States to determine how this technology modifies soil hydrological behavior and crop yields will be presented. A range of soils and various crops, including potatoes, corn, apples and grapes, were included. Several rates were compared to controls for effect on soil moisture levels, soil water distribution, and crop yield. An economic analysis was also conducted in some trials. Treatments improved rootzone water status, significantly increased crop yield and quality, and in some cases allowed significant reductions in water requirements. Where assessed, a positive economic return was generated. This technology holds promise as a strategy for increasing efficiency of water use in agriculture.

Quality of trace element contaminated soils amended with compost under fast growing tree Paulownia fortunei plantation.

PubMed

Madejón, P; Xiong, J; Cabrera, F; Madejón, E

2014-11-01

The use of fast growing trees could be an alternative in trace element contaminated soils to stabilize these elements and improve soil quality. In this study we investigate the effect of Paulownia fortunei growth on trace element contaminated soils amended with two organic composts under semi-field conditions for a period of 18 months. The experiment was carried out in containers filled with tree different soils, two contaminated soils (neutral AZ and acid V) and a non contaminated soil, NC. Three treatments per soil were established: two organic amendments (alperujo compost, AC, and biosolid compost, BC) and a control without amendment addition. We study parameters related with fertility and contamination in soils and plants. Paulownia growth and amendments increased pH in acid soils whereas no effect of these factors was observed in neutral soils. The plant and the amendments also increased organic matter and consequently, soil fertility. Positive results were also found in soils that were only affected by plant growth (without amendment). A general improvement of "soil biochemical quality" was detected over time and treatments, confirming the positive effect of amendments plus paulownia. Even in contaminated soils, except for Cu and Zn, trace element concentrations in leaves were in the normal range for plants. Results of this mid-term study showed that Paulownia fortunei is a promising species for phytoremediation of trace element polluted soils. Copyright © 2014 Elsevier Ltd. All rights reserved.

An ecohydrological model to quantify the risk of drought-induced forest mortality events across climate regimes

NASA Astrophysics Data System (ADS)

Parolari, A.; Katul, G. G.; Porporato, A. M.

2013-12-01

Regional scale drought-induced forest mortality events are projected to become more frequent under future climates due to changes in rainfall patterns. However, the ability to predict the conditions under which such events occur is currently lacking. To quantify and understand the underlying causes of drought-induced forest mortality, we propose a stochastic ecohydrological model that explicitly couples tree water and carbon use strategies with climate characteristics, such as the frequency and severity of drought. Using the model and results from a controlled drought experiment, we identify the soil, vegetation, and climate factors that underlie tree water and carbon deficits and, ultimately, the risk of drought-induced forest mortality. This mortality risk is then compared across the spectrum of anisohydric-isohydric stomatal control strategies and a range of rainfall regimes. These results suggest certain soil-plant combinations may maximize the survivable drought length in a given climate. Finally, we discuss how this approach can be expanded to estimate the effect of anticipated climate change on drought-induced forest mortality and associated consequences for forest water and carbon balances.

Using robust Bayesian network to estimate the residuals of fluoroquinolone antibiotic in soil.

PubMed

Li, Xuewen; Xie, Yunfeng; Li, Lianfa; Yang, Xunfeng; Wang, Ning; Wang, Jinfeng

2015-11-01

Prediction of antibiotic pollution and its consequences is difficult, due to the uncertainties and complexities associated with multiple related factors. This article employed domain knowledge and spatial data to construct a Bayesian network (BN) model to assess fluoroquinolone antibiotic (FQs) pollution in the soil of an intensive vegetable cultivation area. The results show: (1) The relationships between FQs pollution and contributory factors: Three factors (cultivation methods, crop rotations, and chicken manure types) were consistently identified as predictors in the topological structures of three FQs, indicating their importance in FQs pollution; deduced with domain knowledge, the cultivation methods are determined by the crop rotations, which require different nutrients (derived from the manure) according to different plant biomass. (2) The performance of BN model: The integrative robust Bayesian network model achieved the highest detection probability (pd) of high-risk and receiver operating characteristic (ROC) area, since it incorporates domain knowledge and model uncertainty. Our encouraging findings have implications for the use of BN as a robust approach to assessment of FQs pollution and for informing decisions on appropriate remedial measures.

Shifts of methanogenic communities in response to permafrost thaw results in rising methane emissions and soil property changes.

PubMed

Wei, Shiping; Cui, Hongpeng; Zhu, Youhai; Lu, Zhenquan; Pang, Shouji; Zhang, Shuai; Dong, Hailiang; Su, Xin

2018-05-01

Permafrost thaw can bring negative consequences in terms of ecosystems, resulting in permafrost collapse, waterlogging, thermokarst lake development, and species composition changes. Little is known about how permafrost thaw influences microbial community shifts and their activities. Here, we show that the dominant archaeal community shifts from Methanomicrobiales to Methanosarcinales in response to the permafrost thaw, and the increase in methane emission is found to be associated with the methanogenic archaea, which rapidly bloom with nearly tenfold increase in total number. The mcrA gene clone libraries analyses indicate that Methanocellales/Rice Cluster I was predominant both in the original permafrost and in the thawed permafrost. However, only species belonging to Methanosarcinales showed higher transcriptional activities in the thawed permafrost, indicating a shift of methanogens from hydrogenotrophic to partly acetoclastic methane-generating metabolic processes. In addition, data also show the soil texture and features change as a result of microbial reproduction and activity induced by this permafrost thaw. Those data indicate that microbial ecology under warming permafrost has potential impacts on ecosystem and methane emissions.

Estimating Soil Cation Exchange Capacity from Soil Physical and Chemical Properties

NASA Astrophysics Data System (ADS)

Bateni, S. M.; Emamgholizadeh, S.; Shahsavani, D.

2014-12-01

The soil Cation Exchange Capacity (CEC) is an important soil characteristic that has many applications in soil science and environmental studies. For example, CEC influences soil fertility by controlling the exchange of ions in the soil. Measurement of CEC is costly and difficult. Consequently, several studies attempted to obtain CEC from readily measurable soil physical and chemical properties such as soil pH, organic matter, soil texture, bulk density, and particle size distribution. These studies have often used multiple regression or artificial neural network models. Regression-based models cannot capture the intricate relationship between CEC and soil physical and chemical attributes and provide inaccurate CEC estimates. Although neural network models perform better than regression methods, they act like a black-box and cannot generate an explicit expression for retrieval of CEC from soil properties. In a departure with regression and neural network models, this study uses Genetic Expression Programming (GEP) and Multivariate Adaptive Regression Splines (MARS) to estimate CEC from easily measurable soil variables such as clay, pH, and OM. CEC estimates from GEP and MARS are compared with measurements at two field sites in Iran. Results show that GEP and MARS can estimate CEC accurately. Also, the MARS model performs slightly better than GEP. Finally, a sensitivity test indicates that organic matter and pH have respectively the least and the most significant impact on CEC.

Thallium pollution in China: A geo-environmental perspective.

PubMed

Xiao, Tangfu; Yang, Fei; Li, Shehong; Zheng, Baoshan; Ning, Zengping

2012-04-01

It is well known that thallium (Tl) is a non-essential and toxic metal to human health, but less is known about the geo-environmentally-induced Tl pollution and its associated health impacts. High concentrations of Tl that are primarily associated with the epithermal metallogenesis of sulfide minerals have the potential of producing Tl pollution in the environment, which has been recognized as an emerging pollutant in China. This paper aims to review the research progress in China on Tl pollution in terms of the source, mobility, transportation pathway, and health exposure of Tl and to address the environmental concerns on Tl pollution in a geo-environmental perspective. Tl associated with the epithermal metallogenesis of sulfide minerals has been documented to disperse readily and accumulate through the geo-environmental processes of soil enrichment, water transportation and food crop growth beyond a mineralized zone. The enrichments of Tl in local soil, water, and crops may result in Tl pollution and consequent adverse health effects, e.g. chronic Tl poisoning. Investigation of the baseline Tl in the geo-environment, proper land use and health-related environmental planning and regulation are critical to prevent the Tl pollution. Examination of the human urinary Tl concentration is a quick approach to identify exposure of Tl pollution to humans. The experiences of Tl pollution in China can provide important lessons for many other regions in the world with similar geo-environmental contexts because of the high mobility and toxicity of Tl. Copyright © 2011 Elsevier B.V. All rights reserved.

Dispersal of Beauveria bassiana by the activity of nettle insects.

PubMed

Meyling, Nicolai V; Pell, Judith K; Eilenberg, Jørgen

2006-10-01

Recent studies have shown that the entomopathogenic fungus Beauveria bassiana occurs naturally on the phylloplanes of several plants, including nettles. Insects could, by their activity, be contributing to this inoculum by dispersing it from other sites. The potential of nettle aphids Microlophium carnosum and their predator Anthocoris nemorum to disperse conidia of B. bassiana from soil to nettles and from sporulating cadavers in the nettle canopy was investigated in laboratory experiments. In petri dish assays, aphids showed potential to distribute B. bassiana from soil to nettle leaves. Predators dispersed inoculum from both soil and cadavers to nettle leaves in petri dishes. In microcosms, aphids did not disperse B. bassiana from the soil or from cadavers confined in the canopy, but A. nemorum were able to transfer inoculum from soil into the nettle canopy and to distribute conidia from cryptic cadavers. In some instances, infections were initiated in aphids and predators as a consequence of dispersal.

Microbial diversity of landslide soils assessed by RFLP and SSCP fingerprints.

PubMed

Guida, Marco; Cannavacciuolo, Paolo Losanno; Cesarano, Mara; Borra, Marco; Biffali, Elio; D'Alessandro, Raffaella; De Felice, Bruna

2014-08-01

Landslides are a significant component of natural disasters in most countries around the world. Understanding these destructive phenomena through the analysis of possible correlations between microbial communities and the alteration of the soil responsible for landslides is important in order to reduce their negative consequences. To address this issue, bacterial and fungal communities in soils triggering landslides in Termini-Nerano and Massa Lubrense-Nerano (Naples, Italy) were analysed by genetic profiling techniques. Fingerprints were generated by single-strand conformation polymorphisms (SSCP) and random amplified polymorphic DNA (RAPD). The microbial community in both soil types was enriched in species which could contribute to the degradation process occurring during landslides, forming biofilms and leading to the transformation or the formation of minerals. Indeed, some of the identified bacteria were found to favour the transformation of clay minerals. These findings suggest a possible relationship between bacterial and fungal community-colonising soils and the occurrence of landslides.

Efficient Meshfree Large Deformation Simulation of Rainfall Induced Soil Slope Failure

NASA Astrophysics Data System (ADS)

Wang, Dongdong; Li, Ling

2010-05-01

An efficient Lagrangian Galerkin meshfree framework is presented for large deformation simulation of rainfall-induced soil slope failure. Detailed coupled soil-rainfall seepage equations are given for the proposed formulation. This nonlinear meshfree formulation is featured by the Lagrangian stabilized conforming nodal integration method where the low cost nature of nodal integration approach is kept and at the same time the numerical stability is maintained. The initiation and evolution of progressive failure in the soil slope is modeled by the coupled constitutive equations of isotropic damage and Drucker-Prager pressure-dependent plasticity. The gradient smoothing in the stabilized conforming integration also serves as a non-local regularization of material instability and consequently the present method is capable of effectively capture the shear band failure. The efficacy of the present method is demonstrated by simulating the rainfall-induced failure of two typical soil slopes.

Surface Runoff and Snowmelt Infiltration into the Soil on Plowlands in the Forest-Steppe and Steppe Zones of the East European Plain

NASA Astrophysics Data System (ADS)

Barabanov, A. T.; Dolgov, S. V.; Koronkevich, N. I.; Panov, V. I.; Petel'ko, A. I.

2018-01-01

Long-term series of observations over the spring water balance elements on fields with hydrologically contrasting agricultural backgrounds―a loose soil after fall moldboard plowing and a plowland compacted by 12-16% compared to the former soil (perennial grasses, winter crops, stubble)―have been analyzed. The values of surface runoff and water infiltration into the soil in the steppe and forest-steppe zones of European Russia have been calculated for the spring (flooding) period and the entire cold season. The hydrological role of fall plowing has been shown, and water balance elements for the current (1981-2016) and preceding (1957-1980) periods have been compared. A significant decrease in runoff and an increase of water reserve in the soil have been revealed on all plowland types. Consequences of changes in the spring water balance on plowland have been analyzed.

Fast changes in seasonal forest communities due to soil moisture increase after damming.

PubMed

do Vale, Vagner Santiago; Schiavini, Ivan; Araújo, Glein Monteiro; Gusson, André Eduardo; Lopes, Sérgio de Faria; de Oliveira, Ana Paula; do Prado-Júnior, Jamir Afonso; Arantes, Carolina de Silvério; Dias-Neto, Olavo Custodio

2013-12-01

Local changes caused by dams can have drastic consequences for ecosystems, not only because they change the water regime but also the modification on lakeshore areas. Thus, this work aimed to determine the changes in soil moisture after damming, to understand the consequences of this modification on the arboreal community of dry forests, some of the most endangered systems on the planet. We studied these changes in soil moisture and the arboreal community in three dry forests in the Araguari River Basin, after two dams construction in 2005 and 2006, and the potential effects on these forests. For this, plots of 20 m x 10 m were distributed close to the impoundment margin and perpendicular to the dam margin in two deciduous dry forests and one semi-deciduous dry forest located in Southeastern Brazil, totaling 3.6 ha sampled. Besides, soil analysis were undertaken before and after impoundment at three different depths (0-10, 20-30 and 40-50 cm). A tree (minimum DBH of 4.77 cm) community inventory was made before (TO) and at two (T2) and four (T4) years after damming. Annual dynamic rates of all communities were calculated, and statistical tests were used to determine changes in soil moisture and tree communities. The analyses confirmed soil moisture increases in all forests, especially during the dry season and at sites closer to the reservoir; besides, an increase in basal area due to the fast growth of many trees was observed. The highest turnover occurred in the first two years after impoundment, mainly due to the higher tree mortality especially of those closer to the dam margin. All forests showed reductions in dynamic rates for subsequent years (T2-T4), indicating that these forests tended to stabilize after a strong initial impact. The modifications were more extensive in the deciduous forests, probably because the dry period resulted more rigorous in these forests when compared to semideciduous forest. The new shorelines created by damming increased soil moisture in the dry season, making plant growth easier. We concluded that several changes occurred in the T0-T2 period and at 0-30 m to the impoundment, mainly for the deciduous forests, where this community turned into a "riparian-deciduous forest" with large basal area in these patches. However, unlike other transitory disturbances, damming is a permanent alteration and transforms the landscape to a different scenario, probably with major long-term consequences for the environment.

Effective use of ERTS multisensor data in the Great Plains

NASA Technical Reports Server (NTRS)

Myers, V. I. (Principal Investigator)

1972-01-01

The author has identified the following significant results. One unique advantage of ERTS imagery for delineating soil associations is the large area that can be scanned with one photo. Although soil associations usually are published at scales of 1:500,000 or 1:1,000,000, the delineations are drawn on much larger scale maps covering small pieces of the scene and then pieced together. Alluvial areas are usually swollen out of proportion to other soil areas. ERTS imagery puts alluvial areas into their proper size. A second feature of ERTS imagery is that a soil association map constructed with its aid assures that the cartographic level of the associations is more nearly the same. Another advantage of ERTS imagery is that the actual shape and configuration of soil associations are apparent. Also with ERTS imagery significant new delineations may become apparent which were missed when constructing soil association maps from conventional large scale photos.

Impact of Fe(III)-OM complexes and Fe(III) polymerization on SOM pools reactivity under different land uses

NASA Astrophysics Data System (ADS)

Giannetta, B.; Plaza, C.; Zaccone, C.; Siebecker, M. G.; Rovira, P.; Vischetti, C.; Sparks, D. L.

2017-12-01

Soil organic matter (SOM) protection and long-term accumulation are controlled by adsorption to mineral surfaces in different ways, depending on its molecular structure and pedo-climatic conditions. Iron (Fe) oxides are known to be key regulators of the soil carbon (C) cycle, and Fe speciation in soils is highly dependent on environmental conditions and chemical interactions with SOM. However, the molecular structure and hydrolysis of Fe species formed in association with SOM is still poorly described. We hypothesize the existence of two pools of Fe which interact with SOM: mononuclear Fe(III)-SOM complexes and precipitated Fe(III) hydroxides. To verify our hypothesis, we investigated the interactions between Fe(III) and physically isolated soil fractions by means of batch experiments at pH 7. Specifically, we examined the fine silt plus clay (FSi+C) fraction, obtained by ultrasonic dispersion and wet sieving. The soil samples spanned several land uses, including coniferous forest (CFS), grassland (GS), technosols (TS) and agricultural (AS) soils. Solid phase products and supernatants were analyzed for C and Fe content. X-ray diffraction (XRD) and Brunauer-Emmett-Teller (BET) analysis were also performed. Attenuated total reflectance Fourier transform infrared spectroscopy (ATR-FTIR) was used to assess the main C functional groups involved in C complexation and desorption experiments. Preliminary linear combination fitting (LCF) of Fe K-edge extended X-ray absorption fine structure (EXAFS) spectra suggested the formation of ferrihydrite-like polymeric Fe(III) oxides in reacted CFS and GS samples, with higher C and Fe concentration. Conversely, mononuclear Fe(III) OM complexes dominated the speciation for TS and AS samples, characterized by lower C and Fe concentration, inhibiting the hydrolysis and polymerization of Fe (III). This approach will help revealing the mechanisms by which SOM pools can control Fe(III) speciation, and will elucidate how both Fe(III)-OM complexes and Fe(III) polymerization can affect SOM reactivity and, consequently, its mean residence time in different ecosystems.

Comparative morpho-physiology of the metapleural glands of two Atta leaf-cutting ant queens nesting in clayish and organic soils.

PubMed

Vieira, Alexsandro Santana; Camargo-Mathias, Maria Izabel; Roces, Flavio

2015-09-01

Queens of leaf-cutting ants found their nests singly, each consisting of a vertical tunnel and a final horizontal chamber. Because of the claustral mode of nest founding, the queen and/or her initial fungus garden are exposed to threats imposed by several soil pathogens, and the antibiotic secretions produced by their metapleural glands are considered a main adaptation to deal with them. Nests of two Atta leaf-cutting ant species, Atta vollenweideri and Atta sexdens rubropilosa, occur in different soil types, alfisols and oxisols. Their queens are known to excavate the initial nest in different soil horizons, clayish and organic, respectively, which differ in their fertility and associated microbiota. The aim of the present study was to comparatively investigate the morpho-physiology of the metapleural glands in queens of A. vollenweideri and A. sexdens rubropilosa, addressing the question whether the distinct selective pressure imposed by the microbiota in the two different soil types led to morpho-physiological differences in the metapleural glands that were consistent with their antiseptic function. The results revealed that metapleural glands of A. sexdens rubropilosa have a larger number of secretory cells, and consequently a higher production of antibiotic secretions, which may have been selected to allow nest founding at the superficial horizon of oxisols rich in organic matter and microorganisms. Glands of A. vollenweideri, on the contrary, presented fewer secretory cells, suggesting less production of antibiotic secretions. We argue that the excavation of deep founding nests in A. vollenweideri was primarily selected for during evolution to avoid the risk posed by flooding, and further hypothesize that a reduced number of cells in their metapleural glands occurred because of a weak pathogen-driven selective pressure at the preferred soil depth. Copyright © 2015 Elsevier Ltd. All rights reserved.

Controls of nitrogen cycling evaluated along a well-characterized climate gradient.

PubMed

von Sperber, Christian; Chadwick, Oliver A; Casciotti, Karen L; Peay, Kabir G; Francis, Christopher A; Kim, Amy E; Vitousek, Peter M

2017-04-01

The supply of nitrogen (N) constrains primary productivity in many ecosystems, raising the question "what controls the availability and cycling of N"? As a step toward answering this question, we evaluated N cycling processes and aspects of their regulation on a climate gradient on Kohala Volcano, Hawaii, USA. The gradient extends from sites receiving <300 mm/yr of rain to those receiving >3,000 mm/yr, and the pedology and dynamics of rock-derived nutrients in soils on the gradient are well understood. In particular, there is a soil process domain at intermediate rainfall within which ongoing weathering and biological uplift have enriched total and available pools of rock-derived nutrients substantially; sites at higher rainfall than this domain are acid and infertile as a consequence of depletion of rock-derived nutrients, while sites at lower rainfall are unproductive and subject to wind erosion. We found elevated rates of potential net N mineralization in the domain where rock-derived nutrients are enriched. Higher-rainfall sites have low rates of potential net N mineralization and high rates of microbial N immobilization, despite relatively high rates of gross N mineralization. Lower-rainfall sites have moderately low potential net N mineralization, relatively low rates of gross N mineralization, and rates of microbial N immobilization sufficient to sequester almost all the mineral N produced. Bulk soil δ 15 N also varied along the gradient, from +4‰ at high rainfall sites to +14‰ at low rainfall sites, indicating differences in the sources and dynamics of soil N. Our analysis shows that there is a strong association between N cycling and soil process domains that are defined using soil characteristics independent of N along this gradient, and that short-term controls of N cycling can be understood in terms of the supply of and demand for N. © 2017 by the Ecological Society of America.

Contaminant dispersion at the rehabilitated Mary Kathleen uranium mine, Australia

NASA Astrophysics Data System (ADS)

Lottermoser, B. G.; Ashley, P. M.; Costelloe, M. T.

2005-09-01

This study reports on the transfer of contaminants from waste rock dumps and mineralised ground into soils, sediments, waters and plants at the rehabilitated Mary Kathleen uranium mine in semi-arid northwest Queensland. Numerous waste rock dumps were partly covered with benign soil and the open pit mine was allowed to flood. The mineralised and waste calc-silicate rock in the open pit and dumps has major (>1 wt%) Ca, Fe and Mg, minor (>1,000 ppm) Ce, La, Mn, P and S, subminor (>100 ppm) Ba, Cu, Th and U, and trace (<100 ppm) As, Ni, Pb, Y and Zn values. Consequently, chemical and physical weathering processes have acted on waste rock and on rock faces within the open pit, mobilising many elements and leading to their dispersion into soils, stream sediments, pit water and several plant species. Chemical dispersion is initiated by sulfide mineral breakdown, generation of sulfuric acid and formation of several soluble, transient sulfate minerals as evaporative efflorescent precipitates. Radiation doses associated with the open pit average 5.65 mSv year-1; waste dumps commonly have lower values, especially where soil-covered. Surface pit water is slightly acid, with high sulfate values accompanied by levels of U, Cu and Ni close to or above Australian water guideline values for livestock. Dispersion of U and related elements into soils and stream sediments occurs by physical (erosional) processes and from chemical precipitation. Plants growing in the mine void, on waste dumps and contaminated soil display evidence of biological uptake of U, LREE, Cu and Th and to a lesser degree of As, Ni, Pb, Y and Zn, with values being up to 1-2 orders of magnitude above background sites for the same species. Although rehabilitation procedures have been partly successful in reducing dispersion of U and related elements into the surrounding environment, it is apparent that 20 years after rehabilitation, there is significant physical and chemical mobility, including transfer into plants.

Spreading Topsoil Encourages Ecological Restoration on Embankments: Soil Fertility, Microbial Activity and Vegetation Cover

PubMed Central

Rivera, Desirée; Mejías, Violeta; Jáuregui, Berta M.; López-Archilla, Ana Isabel; Peco, Begoña

2014-01-01

The construction of linear transport infrastructure has severe effects on ecosystem functions and properties, and the restoration of the associated roadslopes contributes to reduce its impact. This restoration is usually approached from the perspective of plant cover regeneration, ignoring plant-soil interactions and the consequences for plant growth. The addition of a 30 cm layer of topsoil is a common practice in roadslope restoration projects to increase vegetation recovery. However topsoil is a scarce resource. This study assesses the effects of topsoil spreading and its depth (10 to 30 cm) on two surrogates of microbial activity (β-glucosidase and phosphatase enzymes activity and soil respiration), and on plant cover, plant species richness and floristic composition of embankment vegetation. The study also evaluates the differences in selected physic-chemical properties related to soil fertility between topsoil and the original embankment substrate. Topsoil was found to have higher values of organic matter (11%), nitrogen (44%), assimilable phosphorous (50%) and silt content (54%) than the original embankment substrate. The topsoil spreading treatment increased microbial activity, and its application increased β-glucosidase activity (45%), phosphatase activity (57%) and soil respiration (60%). Depth seemed to affect soil respiration, β-glucosidase and phosphatase activity. Topsoil application also enhanced the species richness of restored embankments in relation to controls. Nevertheless, the depth of the spread topsoil did not significantly affect the resulting plant cover, species richness or floristic composition, suggesting that both depths could have similar effects on short-term recovery of the vegetation cover. A significant implication of these results is that it permits the application of thinner topsoil layers, with major savings in this scarce resource during the subsequent slope restoration work, but the quality of topsoil relative to the original substrate should be previously assessed on a site by site basis. PMID:24984137

Mechanics of aeolian processes: Soil erosion and dust production

NASA Technical Reports Server (NTRS)

Mehrabadi, M. M.

1989-01-01

Aeolian (wind) processes occur as a result of atmosphere/land-surface system interactions. A thorough understanding of these processes and their physical/mechanical characterization on a global scale is essential to monitoring global change and, hence, is imperative to the fundamental goal of the Earth observing system (Eos) program. Soil erosion and dust production by wind are of consequence mainly in arid and semi arid regions which cover 36 percent of the Earth's land surface. Some recent models of dust production due to wind erosion of agricultural soils and the mechanics of wind erosion in deserts are reviewed and the difficulties of modeling the aeolian transport are discussed.

Root-Zone Redox Dynamics - In Search for the Cause of Damage to Treated-Wastewater Irrigated Orchards in Clay Soils

NASA Astrophysics Data System (ADS)

Yalin, David; Shenker, Moshe; Schwartz, Amnon; Assouline, Shmuel; Tarchitzky, Jorge

2016-04-01

Treated wastewater (TW) has become a common source of water for agriculture. However recent findings raise concern regarding its use: a marked decrease (up to 40%) in yield appeared in orchards irrigated with TW compared with fresh water (FW) irrigated orchards. These detrimental effects appeared predominantly in orchards cultivated in clay soils. The association of the damage with clay soils rather than sandy soils led us to hypothesize that the damage is linked to soil aeration problems. We suspected that in clay soils, high sodium adsorption ratio (SAR) and high levels of organic material, both typical of TW, may jointly lead to an extreme decrease in soil oxygen levels, so as to shift soil reduction-oxidation (redox) state down to levels that are known to damage plants. Two-year continuous measurement of redox potential, pH, water tension, and oxygen were conducted in the root-zone (20-35 cm depth) of avocado trees planted in clay soil and irrigated with either TW or FW. Soil solution composition was sampled periodically in-situ and mineral composition was sampled in tree leaves and woody organs biannually. In dry periods the pe+pH values indicated oxic conditions (pe+pH>14), and the fluctuations in redox values were small in both TW and FW plots. Decreases in soil water tension following irrigation or rain were followed by drops in soil oxygen and pe+pH values. TW irrigated plots had significantly lower minimum pe+pH values compared with FW-irrigated plots, the most significant differences occurred during the irrigation season rather than the rain season. A linear correlation appeared between irrigation volume and reduction severity in TW-irrigated plots, but not in the FW plots, indicating a direct link to the irrigation regime in TW-irrigated plots. The minimum pe+pH values measured in the TW plots are indicative of suboxic conditions (9

Natural transformation of chlordecone into 5b-hydrochlordecone in French West Indies soils: statistical evidence for investigating long-term persistence of organic pollutants.

PubMed

Devault, Damien A; Laplanche, Christophe; Pascaline, Hélène; Bristeau, Sébastien; Mouvet, Christophe; Macarie, Hervé

2016-01-01

Chlordecone (CLD) was an organochlorine insecticide whose previous use resulted in an extensive pollution of the environment with severe health effects and social consequences. A closely related compound, 5b-hydrochlordecone (5b-hydroCLD), has been searched for and often detected in environmental matrices from the geographical area where CLD was applied. The current consensus considered that its presence was not the result of a biotic or abiotic dechlorination of CLD in these matrices but rather the consequence of its presence as impurity (synthesis by-product) in the CLD released into the environment. The aim of the present study was to determine if and to what extent degradation of CLD into 5b-hydroCLD occurred in the field. To test this hypothesis, the ratios of 5b-hydroCLD and CLD concentrations in a dataset of 810 soils collected between 2006 and 2012 in Martinique were compared to the ratios measured in 3 samples of the CLD dust commercial formulations applied in the banana fields of French West Indies (FWI) and 1 sample of the technical-grade CLD corresponding to the active ingredient used in such formulations. Soil data were processed with a hierarchical Bayesian model to account for random measurement errors and data censoring. Any pathway of CLD transformation into 5b-hydroCLD occurring over the long term in FWI soils would indeed change the ratio of 5b-hydroCLD/CLD compared to what it was in the initially applied formulations. Results showed a significant increase of the 5b-hydroCLD/CLD ratio in the soils-25 times greater in soil than in commercial formulations-which suggested that natural CLD transformation into 5b-hydroCLD over the long term occurred in these soils. Results from this study may impact future decisions for the remediation of the polluted areas.

Soil-vegetation interaction on slopes with shrub encroachment in the central Alps - simple measurements for complex slopes?

NASA Astrophysics Data System (ADS)

Caviezel, Chatrina; Hunziker, Matthias; Kuhn, Nikolaus J.

2013-04-01

In the European Alps many high mountain grasslands which where traditionally used for summer pasturing and haying have been abandoned during the last decades. Abandonment of mown or grazed grasslands causes a shift in vegetation composition, e.g. a change in landscape ecology and geomorphology. From a short term perspective, alpine areas are very fragile ecosystems and are highly sensitive to changing environmental conditions. Land use change can affect runoff and water erosion rates, snow gliding and avalanches as well as mass wasting in high-energy mountain environments. The effect of land use intensification on surface processes is well documented. However, the effect of land abandonment on surface resistance to eroding processes is discussed controversially in literature, particularly in relation to its short term and long-term consequences. Generally, perennial vegetation is considered to improve the mechanical anchoring of loose surface material and the regulation of the soil water budget including the control over the generation of runoff. This study aimed at determining the effect of green alder encroachment in the Unteralpvalley in the Swiss Alps. A range of measurements of the mechanical strength of the soil under green alder stands ranging from 15 to 90 years of age and a control site still used for grazing were conducted. Unlike the literature on the effects of perennial vegetation suggest, the data presented in this study show that soil shear strength is decreasing with along the sampled chronosequence, including compared to the grazed reference site. A possible explanation for this decline in soil stability with shrub encroachment is the loosing effect of the green alder roots on the soil structure, which causes an increase in porosity and thus less friction between soil particles. As a consequence, rates of water erosion may decline with shrub encroachment, but frequency of creeping and sliding may increase.

Elevated soil nitrogen pools after conversion of turfgrass to water-efficient residential landscapes

NASA Astrophysics Data System (ADS)

Heavenrich, Hannah; Hall, Sharon J.

2016-08-01

As a result of uncertain resource availability and growing populations, city managers are implementing conservation plans that aim to provide services for people while reducing household resource use. For example, in the US, municipalities are incentivizing homeowners to replace their water-intensive turfgrass lawns with water-efficient landscapes consisting of interspersed drought-tolerant shrubs and trees with rock or mulch groundcover (e.g. xeriscapes, rain gardens, water-wise landscapes). While these strategies are likely to reduce water demand, the consequences for other ecosystem services are unclear. Previous studies in controlled, experimental landscapes have shown that conversion from turfgrass to shrubs may lead to high rates of nutrient leaching from soils. However, little is known about the long-term biogeochemical consequences of this increasingly common land cover change across diverse homeowner management practices. We explored the fate of soil nitrogen (N) across a chronosequence of land cover change from turfgrass to water-efficient landscapes in privately owned yards in metropolitan Phoenix, Arizona, in the arid US Southwest. Soil nitrate ({{{{NO}}}3}--N) pools were four times larger in water-efficient landscapes (25 ± 4 kg {{{{NO}}}3}--N/ha 0-45 cm depth) compared to turfgrass lawns (6 ± 7 kg {{{{NO}}}3}--N/ha). Soil {{{{NO}}}3}--N also varied significantly with time since landscape conversion; the largest pools occurred at 9-13 years after turfgrass removal and declined to levels comparable to turfgrass thereafter. Variation in soil {{{{NO}}}3}--N with landscape age was strongly influenced by management practices related to soil water availability, including shrub cover, sub-surface plastic sheeting, and irrigation frequency. Our findings show that transitioning from turfgrass to water-efficient residential landscaping can lead to an accumulation of {{{{NO}}}3}--N that may be lost from the plant rooting zone over time following irrigation or rainfall. These results have implications for best management practices to optimize the benefits of water-conserving landscapes while protecting water quality.

Integrated evaluation of the vulnerability to thermokarst disturbance and its implications for the regional carbon balance in boreal Alaska

NASA Astrophysics Data System (ADS)

Helene, G.; Lara, M. J.; McGuire, A. D.; Euskirchen, E. S.; Bolton, W. R.; Romanovsky, V. E.

2017-12-01

Our capacity to project future ecosystem trajectories in northern permafrost regions depends on our ability to characterize complex interactions between climatic and ecological processes at play in the soil, the vegetation, and the atmosphere. We present a study that uses remote sensing analyses, field observations, and data synthesis to inform models for the prediction of ecosystem responses to climate change in the boreal zone of Alaska. Recent warming, altered precipitation and fire regimes are driving permafrost degradation, threatening to mobilize vast reservoirs of ancient carbon previously protected from decomposition. Although large scale, progressive, top-down permafrost thaw have been well studied and represented in high-latitude ecosystem models, the consequences of abrupt and local thermokarst disturbances (TK) are less well understood. To fill this gap, we conducted a detection analysis characterizing 60 years of land cover change in the Tanana Flats, a wetland complex subjected to TK disturbance in Interior Alaska, using aerial and satellite images. We observed a nonlinear loss of permafrost plateau forest associated with TK and driven by precipitation and forest fragmentation. The results of this analysis were integrated into the Alaska Thermokarst Model (ATM), a state-and-transition model that simulates land cover change associated with TK disturbance. Thermokarst-related land cover change was simulated from 2000 to 2100 across the Tanana Flats. By 2100, the model predicts a mean decrease of 7.4% (sd 1.8%) in permafrost plateau forests associated with an increase in TK fens and bogs. Transitions from permafrost plateau forests to TK wetlands are accompanied with changes in physical and biogeochemical processes affecting ecosystem carbon balance. We evaluated the consequences of TK disturbances on the regional carbon balance by coupling outputs from the ATM and from a process-based biogeochemical model. We used long-term field observations of vegetation and soil physical and biogeochemical attributes to develop new parameterizations for TK wetlands and permafrost plateau forest land cover types. Preliminary simulations from 2000 to 2100 estimate that the conversion of permafrost plateau forest to young TK wetlands would result in a 7.5% (sd 3.5%) decrease in Net Ecosystem Exchange.

Climate dependency of tree growth suppressed by acid deposition effects on soils in Northwest Russia

USGS Publications Warehouse

Lawrence, G.B.; Lapenis, A.G.; Berggren, D.; Aparin, B.F.; Smith, K.T.; Shortle, W.C.; Bailey, S.W.; Varlyguin, D.L.; Babikov, B.

2005-01-01

Increased tree growth in temperate and boreal forests has been proposed as a direct consequence of a warming climate. Acid deposition effects on nutrient availability may influence the climate dependency of tree growth, however. This study presents an analysis of archived soil samples that has enabled changes in soil chemistry to be tracked with patterns of tree growth through the 20th century. Soil samples collected in 1926, 1964, and 2001, near St. Petersburg, Russia, showed that acid deposition was likely to have decreased root-available concentrations of Ca (an essential element) and increased root-available concentrations of Al (an inhibitor of Ca uptake). These soil changes coincided with decreased diameter growth and a suppression of climate-tree growth relationships in Norway spruce. Expected increases in tree growth from climate warming may be limited by decreased soil fertility in regions of northern and eastern Europe, and eastern North America, where Ca availability has been reduced by acidic deposition. ?? 2005 American Chemical Society.

Comparison of electrokinetic soil remediation methods using one fixed anode and approaching anodes.

PubMed

Shen, Zhemin; Chen, Xuejun; Jia, Jinping; Qu, Liya; Wang, Wenhua

2007-11-01

During the cation exchange membrane (CEM) enhanced electrokinetic (EK) soil remediation, the nearer to the anode, the higher are the H+ concentrations and the redox potentials. As both low pH and high redox potential are helpful to speed-up Cd electro-migration, soils near the anode can be quickly remedied. Usually EK process is operated with one fixed anode (FA). A novel CEM enhanced EK method with approaching anodes (AAs) is proposed to accelerate electro-migration effect. Several mesh Ti/Ru anodes were inserted as AAs in the treated soil. They were switched in turn from the anode towards the cathode. Thus high H+ ions concentrations and high redox potentials quickly migrate to the cathode. Consequently, soil remediation is accelerated and nearly 44% of energy and 40% of time can be saved. The mechanism of Cd electro-migration behavior in soils during CEM enhanced EK is described as the elution in an electrokinetically driven chromatogram.

Geotechnical behaviour of low-permeability soils in surfactant-enhanced electrokinetic remediation.

PubMed

López-Vizcaíno, Rubén; Navarro, Vicente; Alonso, Juan; Yustres, Ángel; Cañizares, Pablo; Rodrigo, Manuel A; Sáez, Cristina

2016-01-01

Electrokinetic processes provide the basis of a range of very interesting techniques for the remediation of polluted soils. These techniques consist of the application of a current field in the soil that develops different transport mechanisms capable of mobilizing several types of pollutants. However, the use of these techniques could generate nondesirable effects related to the geomechanical behavior of the soil, reducing the effectiveness of the processes. In the case of the remediation of polluted soils with plasticity index higher than 35, an excessive shrinkage can be observed in remediation test. For this reason, the continued evaporation that takes place in the sample top can lead to the development of cracks, distorting the electrokinetic transport regime, and consequently, the development of the operation. On the other hand, when analyzing silty soils, in the surroundings of injection surfactant wells, high seepages can be generated that give rise to the development of piping processes. In this article methods are described to allow a reduction, or to even eliminate, both problems.

Error in Radar-Derived Soil Moisture due to Roughness Parameterization: An Analysis Based on Synthetical Surface Profiles

PubMed Central

Lievens, Hans; Vernieuwe, Hilde; Álvarez-Mozos, Jesús; De Baets, Bernard; Verhoest, Niko E.C.

2009-01-01

In the past decades, many studies on soil moisture retrieval from SAR demonstrated a poor correlation between the top layer soil moisture content and observed backscatter coefficients, which mainly has been attributed to difficulties involved in the parameterization of surface roughness. The present paper describes a theoretical study, performed on synthetical surface profiles, which investigates how errors on roughness parameters are introduced by standard measurement techniques, and how they will propagate through the commonly used Integral Equation Model (IEM) into a corresponding soil moisture retrieval error for some of the currently most used SAR configurations. Key aspects influencing the error on the roughness parameterization and consequently on soil moisture retrieval are: the length of the surface profile, the number of profile measurements, the horizontal and vertical accuracy of profile measurements and the removal of trends along profiles. Moreover, it is found that soil moisture retrieval with C-band configuration generally is less sensitive to inaccuracies in roughness parameterization than retrieval with L-band configuration. PMID:22399956

Climate dependency of tree growth suppressed by acid deposition effects on soils in northwest Russia.

PubMed

Lawrence, Gregory B; Lapenis, Andrei G; Berggren, Dan; Aparin, Boris F; Smith, Kevin T; Shortle, Walter C; Bailey, Scott W; Varlyguin, Dmitry L; Babikov, Boris

2005-04-01

Increased tree growth in temperate and boreal forests has been proposed as a direct consequence of a warming climate. Acid deposition effects on nutrient availability may influence the climate dependency of tree growth, however. This study presents an analysis of archived soil samples that has enabled changes in soil chemistry to be tracked with patterns of tree growth through the 20th century. Soil samples collected in 1926, 1964, and 2001, near St. Petersburg, Russia, showed that acid deposition was likely to have decreased root-available concentrations of Ca (an essential element) and increased root-available concentrations of Al (an inhibitor of Ca uptake). These soil changes coincided with decreased diameter growth and a suppression of climate-tree growth relationships in Norway spruce. Expected increases in tree growth from climate warming may be limited by decreased soil fertility in regions of northern and eastern Europe, and eastern North America, where Ca availability has been reduced by acidic deposition.

Assessment of the spatio-temporal distribution of soil properties in East Kolkata wetland ecosystem (A Ramsar site: 1208)

NASA Astrophysics Data System (ADS)

Pal, S.; Manna, S.; Aich, A.; Chattopadhyay, B.; Mukhopadhyay, S. K.

2014-06-01

The present investigation was made to characterize spatial and temporal variations in soil properties and to evaluate possible differences that could be dependent on the tannery effluent discharges, municipal sewage discharges, vegetation cover, soil settlement rate, crop rotation, etc. Soil total organic matter (TOM), cations like, Sodium (Na), Ammonium (NH4), Potassium (K), Calcium (Ca) and Magnesium (Mg) contents in the bank soils and bottom sediments were recorded from seven different characteristic sites in East Kolkata wetland ecosystem, a Ramsar site (Ramsar site No. 1208). The profile maps were constructed by geostatistical methods to describe the spatial distribution as well as temporal variations of all the factors to identify the influences of composite wastewaters. The work was initiated to identify causes and consequences of the waste dumping in the concerned region for the past hundred years and thereby to suggest necessary precautionary measures to prevent further loss of soil quality.

Improving Soil Moisture and Temperature Profile and Surface Turbulent Fluxes Estimations in Irrigated Field by Assimilating Multi-source Data into Land Surface Model

NASA Astrophysics Data System (ADS)

Chen, Weijing; Huang, Chunlin; Shen, Huanfeng; Wang, Weizhen

2016-04-01

The optimal estimation of hydrothermal conditions in irrigation field is restricted by the deficiency of accurate irrigation information (when and how much to irrigate). However, the accurate estimation of soil moisture and temperature profile and surface turbulent fluxes are crucial to agriculture and water management in irrigated field. In the framework of land surface model, soil temperature is a function of soil moisture - subsurface moisture influences the heat conductivity at the interface of layers and the heat storage in different layers. In addition, soil temperature determines the phase of soil water content with the transformation between frozen and unfrozen. Furthermore, surface temperature affects the partitioning of incoming radiant energy into ground (sensible and latent heat flux), as a consequence changes the delivery of soil moisture and temperature. Given the internal positive interaction lying in these variables, we attempt to retrieve the accurate estimation of soil moisture and temperature profile via assimilating the observations from the surface under unknown irrigation. To resolve the input uncertainty of imprecise irrigation quantity, original EnKS is implemented with inflation and localization (referred to as ESIL) aiming at solving the underestimation of the background error matrix and the extension of observation information from the top soil to the bottom. EnKS applied in this study includes the states in different time points which tightly connect with adjacent ones. However, this kind of relationship gradually vanishes along with the increase of time interval. Thus, the localization is also employed to readjust temporal scale impact between states and filter out redundant or invalid correlation. Considering the parameter uncertainty which easily causes the systematic deviation of model states, two parallel filters are designed to recursively estimate both states and parameters. The study area consists of irrigated farmland and is located in an artificial oasis in the semi-arid region of northwestern China. Land surface temperature (LST) and soil volumetric water content (SVW) at first layer measured at Daman station are taken as observations in the framework of data assimilation. The study demonstrates the feasibility of ESIL in improving the soil moisture and temperature profile under unknown irrigation. ESIL promotes the coefficient correlation with in-situ measurements for soil moisture and temperature at first layer from 0.3421 and 0.7027 (ensemble simulation) to 0.8767 and 0.8304 meanwhile all the RMSE of soil moisture and temperature in deeper layers dramatically decrease more than 40 percent in different degree. To verify the reliability of ESIL in practical application, thereby promoting the utilization of satellite data, we test ESIL with varying observation internal interval and standard deviation. As a consequence, ESIL shows stabilized and promising effectiveness in soil moisture and soil temperature estimation.

Scots pine litter decomposition along drainage succession and soil nutrient gradients in peatland forests, and the effects of inter-annual weather variation

Treesearch

Raija Laiho; Jukka Laine; Carl C. Trettin; Leena Finér

2004-01-01

Peatlands form a large carbon (C) pool but their C sink is labile and susceptible to changes in climate and land-use. Some pristine peatlands are forested, and others have the potential: the amount of arboreal vegetation is likely to increase if soil water levels are lowered as a consequence of climate change. On those sites tree litter dynamics may be crucial for the...

Microbial Diversity and Structure Are Drivers of the Biological Barrier Effect against Listeria monocytogenes in Soil

PubMed Central

Vivant, Anne-Laure; Garmyn, Dominique; Maron, Pierre-Alain; Nowak, Virginie; Piveteau, Pascal

2013-01-01

Understanding the ecology of pathogenic organisms is important in order to monitor their transmission in the environment and the related health hazards. We investigated the relationship between soil microbial diversity and the barrier effect against Listeria monocytogenes invasion. By using a dilution-to-extinction approach, we analysed the consequence of eroding microbial diversity on L. monocytogenes population dynamics under standardised conditions of abiotic parameters and microbial abundance in soil microcosms. We demonstrated that highly diverse soil microbial communities act as a biological barrier against L. monocytogenes invasion and that phylogenetic composition of the community also has to be considered. This suggests that erosion of diversity may have damaging effects regarding circulation of pathogenic microorganisms in the environment. PMID:24116193

Soft X-ray spectromicroscopy study of mineral-organic matter associations in pasture soil clay fractions.

PubMed

Chen, Chunmei; Dynes, James J; Wang, Jian; Karunakaran, Chithra; Sparks, Donald L

2014-06-17

There is a growing acceptance that associations with soil minerals may be the most important overarching stabilization mechanism for soil organic matter. However, direct investigation of organo-mineral associations has been hampered by a lack of methods that can simultaneously characterize organic matter (OM) and soil minerals. In this study, STXM-NEXAFS spectroscopy at the C 1s, Ca 2p, Fe 2p, Al 1s, and Si 1s edges was used to investigate C associations with Ca, Fe, Al, and Si species in soil clay fractions from an upland pasture hillslope. Bulk techniques including C and N NEXAFS, Fe K-edge EXAFS spectroscopy, and XRD were applied to provide additional information. Results demonstrated that C was associated with Ca, Fe, Al, and Si with no separate phase in soil clay particles. In soil clay particles, the pervasive C forms were aromatic C, carboxyl C, and polysaccharides with the relative abundance of carboxyl C and polysaccharides varying spatially at the submicrometer scale. Only limited regions in the soil clay particles had aliphatic C. Good C-Ca spatial correlations were found for soil clay particles with no CaCO3, suggesting a strong role of Ca in organo-mineral assemblage formation. Fe EXAFS showed that about 50% of the total Fe in soils was contained in Fe oxides, whereas Fe-bearing aluminosilicates (vermiculite and Illite) accounted for another 50%. Fe oxides in the soil were mainly crystalline goethite and hematite, with lesser amounts of poorly crystalline ferrihydrite. XRD revealed that soil clay aluminosilicates were hydroxy-interlayered vermiculite, Illite, and kaolinite. C showed similar correlation with Fe to Al and Si, implying a similar association of Fe oxides and aluminosilicates with organic matter in organo-mineral associations. These direct microscopic determinations can help improve understanding of organo-mineral interactions in soils.

Soil and public health: invisible bridges

NASA Astrophysics Data System (ADS)

Pachepsky, Yakov

2017-04-01

Public health institutions, as ancient as civilizations itself, are intrinsically connected with soils. The massive body of the empirical knowledge about this connection has been accumulated. Recently unraveling the underlying mechanisms of this link has begun, and many of them appear to have the microbiological origin. The impressive progress in understanding the nexus between soil and health has been achieved by experimentation with preserved soil microbial systems functioning along with the metagenomic characterization. The objective of this work is to present an overview of some recent onsets. In the food safety arena, survival of human pathogens in soils has been related to the degree of soil eutrophication and/or related structure of soil microbial communities. Soil microbial systems affect the affinity of plants to internalizing pathogenic organisms. Pharmaceutical arsenals benefit from using field soil environment for developing antibiotics. Enzyme production by soil bacteria is used as the signal source for drug activation. Sanitary functions of sols are dependent on soil microbial system workings. The healthy living can be enhanced by the human immune system training received from direct contact with soils. The hygiene hypothesis considers the microbial input due to exposure to soil as the essential ecosystem service. The invisible links between soil and public health result in large-scale consequences. Examples of concurrent degradation of soil and public health are worth scrutinizing. Public health records can provide valuable sources of 'soil-public health' interactions. It may be worthwhile to examine current assessments of soil health from the public health standpoint. Soil management can be an efficient instrument of public health control.

Belowground communication: impacts of volatile organic compounds (VOCs) from soil fungi on other soil-inhabiting organisms.

PubMed

Werner, Stephanie; Polle, Andrea; Brinkmann, Nicole

2016-10-01

We reviewed the impact of fungal volatile organic compounds (VOCs) on soil-inhabiting organisms and their physiological and molecular consequences for their targets. Because fungi can only move by growth to distinct directions, a main mechanism to protect themselves from enemies or to manipulate their surroundings is the secretion of exudates or VOCs. The importance of VOCs in this regard has been significantly underestimated. VOCs not only can be means of communication, but also signals that are able to specifically manipulate the recipient. VOCs can reprogram root architecture of symbiotic partner plants or increase plant growth leading to enlarged colonization surfaces. VOCs are also able to enhance plant resistance against pathogens by activating phytohormone-dependent signaling pathways. In some cases, they were phytotoxic. Because the response was specific to distinct species, fungal VOCs may contribute to regulate the competition of plant communities. Additionally, VOCs are used by the producing fungus to attack rivaling fungi or bacteria, thereby protecting the emitter or its nutrient sources. In addition, animals, like springtails, nematodes, and earthworms, which are important components of the soil food web, respond to fungal VOCs. Some VOCs are effective repellents for nematodes and, therefore, have applications as biocontrol agents. In conclusion, this review shows that fungal VOCs have a huge impact on soil fauna and flora, but the underlying mechanisms, how VOCs are perceived by the recipients, how they manipulate their targets and the resulting ecological consequences of VOCs in inter-kingdom signaling is only partly understood. These knowledge gaps are left to be filled by future studies.

Interrill Erodibility of P and C on conventially and organically farmed Devon soils

NASA Astrophysics Data System (ADS)

Kuhn, N. J.

2012-04-01

Soil erosion can have significant off-site effects on water quality and thus human and habitat health. Apart from sedimentation, the transfer of nutrients, both dissolved and particulate, is a major concern. The particulate transfer of nutrients from agricultural land can occur either by rill or interrill erosion. Rill erosion is non-selective and affects only a limited extent of agricultural land. Interrill processes such as crusting, splash and raindrop-impacted wash, on the other hand, act on all cropland and affect the quality of the water from all areas generating runoff. A significant amount of phosphorus (P) is contained in the surface soil layer transformed by interrill processes annually. In the EU, the P content of a crusted (2 mm) surface layer corresponds to 4 to 40 kg ha-1 of P on arable land (1.094 mil km2). Therefore, the role of interrill processes and erosion for regional nutrient cycling requires close attention. Interrill erosion is a complex phenomenon, involving the detachment, transport and deposition of soil particles by raindrop impacted flow. Resistance to interrill erosion varies between soils depending on their physical, chemical and mineralogical properties. In addition, significant changes in soil resistance to interrill erosion occur during storms as a result of changes in surface roughness, cohesion and particle size. As a consequence, erosion on interrill areas is selective, moving the most easily detached small and/or light soil particles which are often enriched in clay, P and organic C. Commonly, the risk of erosion associated with organically farmed soils is lower than those farmed in a conventional way. This is attributed to greater aggregate stability and thus greater infiltration and lower erodibility. Erosion of nutrients on organically farmed soils is therefore considered to be reduced by the same order of magnitude than the amount of eroded soil compared to conventionally farmed soils. However, the selective nature of interrill erosion potentially counteracts this effect by the preferential removal of fine particles enriched in nutrients and soil organic matter. In this study, an experiment comparing the erodibility of P and C on organically and conventially farmed soils from Devon is presented. The results show a disproportional increase of P in sediment from the organically farmed soil, reducing the perceived benefit of organic farming on nutrient erosion by 80%. The pronounced P enrichment in the organically farmed soil is attributed to the higher concentrations of C and P as well as lower densities of the small particle fraction. The results, while very preliminary, indicate that the impact of soil management on off-site effects of erosion such as water quality can only be fully assessed when we understand the relevant erosion processes. They also indicate that some less than expected positive effects of changing soil management to improve water quality might be caused by the preferential erosion of P-bearing soil particles.

The role of topographic structure and soil macrofauna presence at spoil heaps during spontaneous succession.

NASA Astrophysics Data System (ADS)

Walmsley, Alena; Vachová, Pavla; Vach, Marek

2016-04-01

This research was investigating whether topographic features, which determine soil nutrient and moisture distribution, in combination with soil fauna (wireworm and earthworm) presence, affect plant community composition at a spontaneously revegetated post mining area with an undulating surface. Two sites of different age with 3 types of topographic features were selected, soil moisture and nutrient content were measured, plant community composition and soil macrofauna community was sampled at each position. Wireworms were present at all positions and were most abundant at bottoms of waves at the younger site; their presence was correlated with several plant species, but the direction of the interaction isn't clear. Earthworms were only present at the older site and had highest abundance at flat sections. Earthworm presence affected the amount of nitrogen in soil - the most nitrogen content was at the site with highest earthworm density and was followed by higher diversity of plant community. The plant community composition was generally correlated with plant available nutrient content - especially P and N. We infer that topographic features affect nutrient and soil fauna distribution, which consequently influences plant community composition.

The effect of Piriformospora indica on the root development of maize (Zea mays L.) and remediation of petroleum contaminated soil.

PubMed

Zamani, Javad; Hajabbasi, Mohammad Ali; Alaie, Ebrahim; Sepehri, Mozhgan; Leuchtmann, Adrian; Schulin, Rainer

2016-01-01

As the depth of soil petroleum contamination can vary substantially under field conditions, a rhizotron experiment was performed to investigate the influence of endophyte, P. indica, on maize growth and degradation of petroleum components in a shallow and a deep-reaching subsurface layer of a soil. For control, a treatment without soil contamination was also included. The degree in contamination and the depth to which it extended had a strong effect on the growth of the plant roots. Contaminated soil layers severely inhibited root growth thus many roots preferred to bypass the shallow contaminated layer and grow in the uncontaminated soil. While the length and branching pattern of these roots were similar to those of uncontaminated treatment. Inoculation of maize with P. indica could improve root distribution and root and shoot growth in all three contamination treatments. This inoculation also enhanced petroleum degradation in soil, especially in the treatment with deep-reaching contamination, consequently the accumulation of petroleum hydrocarbons (PAHs) in the plant tissues were increased.

Modeling Coupled Movement of Water, Vapor, and Energy in Soils and at the Soil-Atmosphere Interface Using HYDRUS

NASA Astrophysics Data System (ADS)

Simunek, Jiri; Brunetti, Giuseppe; Saito, Hirotaka; Bristow, Keith

2017-04-01

Mass and energy fluxes in the subsurface are closely coupled and cannot be evaluated without considering their mutual interactions. However, only a few numerical models consider coupled water, vapor and energy transport in both the subsurface and at the soil-atmosphere interface. While hydrological and thermal processes in the subsurface are commonly implemented in existing models, which often consider both isothermally and thermally induced water and vapor flow, the interactions at the soil-atmosphere interface are often simplified, and the effects of slope inclination, slope azimuth, variable surface albedo and plant shading on incoming radiation and spatially variable surface mass and energy balance, and consequently on soil moisture and temperature distributions, are rarely considered. In this presentation we discuss these missing elements and our attempts to implement them into the HYDRUS model. We demonstrate implications of some of these interactions and their impact on the spatial distributions of soil temperature and water content, and their effect on soil evaporation. Additionally, we will demonstrate the use of the HYDRUS model to simulate processes relevant to the ground source heat pump systems.

The Erosion of expansive soils through a zoning of Taza (Morocco)

NASA Astrophysics Data System (ADS)

Demehati, A.; Abidi, A.; El Qandil, M.

2018-05-01

Like other cities in the region of Fez-Meknes, Taza undergoes the phenomena of erosion of soils facing the builder in general and the town planner in particular. This type of aggression of the land is sometimes amplified by the swelling-withdrawal of soils. In effect the marl clay layers are considered as unstable soils because of their volumetric changes depending on the duration and intensity of extreme climate changes (weather, droughts, ventilation.). This phenomenon, which is part directly or indirectly so-called natural disasters, can lead to significant costly damage and particularly intense (soil erosion, landslides, obstruction of the course of the water, hydraulic works and sanitation networks, cracks of the constructions and their annexes’, deformations of pavements, etc.). The knowledge and mastery of this phenomenon are essential to prevent, limit or remedy the consequences and damage related to their impacts. We focus as well our contribution on the geotechnical characteristics of the soils of the city of Taza with highlighting of the hazards in susceptibility to erosion of soils in particular through their potential of swelling-removing and this for the benefit geotechnical zoning of Taza.

Earthworms as ecosystem engineers and the most important detritivors in forest soils.

PubMed

Kooch, Yahya; Jalilvand, Hamid

2008-03-15

Earthworms are considered as soil engineers because of their effects on soil properties and their influence on the availability of resources for other organisms, including microorganisms and plants. However, the links between their impacts on the soil environment and the resulting modification of natural selection pressures on engineer as well as on other organisms have received little attention. Earthworms are known to have a positive influence on the soil fabric and on the decomposition and mineralization of litter by breaking down organic matter and producing large amounts of fasces, thereby mixing litter with the mineral soil. Therefore, they play an important part in changes from one humus from to another according to forest succession patterns. Consequently, they are also expected to be good bio-indicators for forest site quality and are thus useful when planning forest production improvement. Earthworm's populations are as indicator that in exploited regions is destruction indicator and reclamation plans is nature return indicator. In this study we summarized the current knowledge in relation to earthworm's ecology in forest soils as ecosystem engineers.

Can soil microbial diversity influence plant metabolites and life history traits of a rhizophagous insect? A demonstration in oilseed rape.

PubMed

Lachaise, Tom; Ourry, Morgane; Lebreton, Lionel; Guillerm-Erckelboudt, Anne-Yvonne; Linglin, Juliette; Paty, Chrystelle; Chaminade, Valérie; Marnet, Nathalie; Aubert, Julie; Poinsot, Denis; Cortesero, Anne-Marie; Mougel, Christophe

2017-12-01

Interactions between plants and phytophagous insects play an important part in shaping the biochemical composition of plants. Reciprocally plant metabolites can influence major life history traits in these insects and largely contribute to their fitness. Plant rhizospheric microorganisms are an important biotic factor modulating plant metabolites and adaptation to stress. While plant-insects or plant-microorganisms interactions and their consequences on the plant metabolite signature are well-documented, the impact of soil microbial communities on plant defenses against phytophagous insects remains poorly known. In this study, we used oilseed rape (Brassica napus) and the cabbage root fly (Delia radicum) as biological models to tackle this question. Even though D. radicum is a belowground herbivore as a larva, its adult life history traits depend on aboveground signals. We therefore tested whether soil microbial diversity influenced emergence rate and fitness but also fly oviposition behavior, and tried to link possible effects to modifications in leaf and root metabolites. Through a removal-recolonization experiment, 3 soil microbial modalities ("high," "medium," "low") were established and assessed through amplicon sequencing of 16S and 18S ribosomal RNA genes. The "medium" modality in the rhizosphere significantly improved insect development traits. Plant-microorganism interactions were marginally associated to modulations of root metabolites profiles, which could partly explain these results. We highlighted the potential role of plant-microbial interaction in plant defenses against Delia radicum. Rhizospheric microbial communities must be taken into account when analyzing plant defenses against herbivores, being either below or aboveground. © 2017 Institute of Zoology, Chinese Academy of Sciences.

Characterization of carotenoids in soil bacteria and investigation of their photodegradation by UVA radiation via resonance Raman spectroscopy.

PubMed

Kumar B N, Vinay; Kampe, Bernd; Rösch, Petra; Popp, Jürgen

2015-07-07

A soil habitat consists of an enormous number of pigmented bacteria with the pigments mainly composed of diverse carotenoids. Most of the pigmented bacteria in the top layer of the soil are photoprotected from exposure to huge amounts of UVA radiation on a daily basis by these carotenoids. The photostability of these carotenoids depends heavily on the presence of specific features like a carbonyl group or an ionone ring system on its overall structure. Resonance Raman spectroscopy is one of the most sensitive and powerful techniques to detect and characterize these carotenoids and also monitor processes associated with them in their native system at a single cell resolution. However, most of the resonance Raman profiles of carotenoids have very minute differences, thereby making it extremely difficult to confirm if these differences are attributed to the presence of different carotenoids or if it is a consequence of their interaction with other cellular components. In this study, we devised a method to overcome this problem by monitoring also the photodegradation of the carotenoids in question by UVA radiation wherein a differential photodegradation response will confirm the presence of different carotenoids irrespective of the proximities in their resonance Raman profiles. Using this method, the detection and characterization of carotenoids in pure cultures of five species of pigmented coccoid soil bacteria is achieved. We also shed light on the influence of the structure of the carotenoid on its photodegradation which can be exploited for use in the characterization of carotenoids via resonance Raman spectroscopy.

Bacterial endophytes enhance competition by invasive plants.

PubMed

Rout, Marnie E; Chrzanowski, Thomas H; Westlie, Tara K; DeLuca, Thomas H; Callaway, Ragan M; Holben, William E

2013-09-01

Invasive plants can alter soil microbial communities and profoundly alter ecosystem processes. In the invasive grass Sorghum halepense, these disruptions are consequences of rhizome-associated bacterial endophytes. We describe the effects of N2-fixing bacterial strains from S. halepense (Rout and Chrzanowski, 2009) on plant growth and show that bacteria interact with the plant to alter soil nutrient cycles, enabling persistence of the invasive. • We assessed fluxes in soil nutrients for ∼4 yr across a site invaded by S. halepense. We assayed the N2-fixing bacteria in vitro for phosphate solubilization, iron chelation, and production of the plant-growth hormone indole-3-acetic acid (IAA). We assessed the plant's ability to recruit bacterial partners from substrates and vertically transmit endophytes to seeds and used an antibiotic approach to inhibit bacterial activity in planta and assess microbial contributions to plant growth. • We found persistent alterations to eight biogeochemical cycles (including nitrogen, phosphorus, and iron) in soils invaded by S. halepense. In this context, three bacterial isolates solubilized phosphate, and all produced iron siderophores and IAA in vitro. In growth chamber experiments, bacteria were transmitted vertically, and molecular analysis of bacterial community fingerprints from rhizomes indicated that endophytes are also horizontally recruited. Inhibiting bacterial activity with antibiotics resulted in significant declines in plant growth rate and biomass, with pronounced rhizome reductions. • This work suggests a major role of endophytes on growth and resource allocation of an invasive plant. Indeed, bacterial isolate physiology is correlated with invader effects on biogeochemical cycles of nitrogen, phosphate, and iron.

Arbuscular mycorrhizal fungi in national parks, nature reserves and protected areas worldwide: a strategic perspective for their in situ conservation.

PubMed

Turrini, Alessandra; Giovannetti, Manuela

2012-02-01

Soil fungi play a crucial role in producing fundamental ecosystem services such as soil fertility, formation and maintenance, nutrient cycling and plant community dynamics. However, they have received little attention in the field of conservation biology. Arbuscular mycorrhizal fungi (AMF) are beneficial soil symbionts fulfilling a key function in the complex networks of belowground/aboveground biotic interactions as they live in association with the roots of most (80%) land plant families and influence not only soil fertility but also plant nutrition, diversity and productivity. The diversity of AMF communities can decline due to habitat loss and anthropogenic disturbance, especially in agro-ecosystems, and many valuable ecotypes could become extinct before they are even discovered. Consequently, long-term strategies are urgently needed to ensure their conservation in habitats where they naturally occur and have evolved. Protected areas, where living organisms are under the care of national and international authorities, represent an appropriate place for the in situ conservation of AMF, providing them with adapted situations together with established complex networks of interactions with different components within each specific ecosystem. Here, we review data available about the main present-day threats to AMF and the current state of knowledge about their occurrence in protected sites worldwide, providing a checklist of national parks and nature reserves where they have been reported. The aim was to offer a strategic perspective to increase awareness of the importance of conserving these beneficial plant symbionts and of preserving their biodiversity in the years to come.

Diagnosis of nutrient imbalances with vector analysis in agroforestry systems.

PubMed

Isaac, Marney E; Kimaro, Anthony A

2011-01-01

Agricultural intensification has had unintended environmental consequences, including increased nutrient leaching and surface runoff and other agrarian-derived pollutants. Improved diagnosis of on-farm nutrient dynamics will have the advantage of increasing yields and will diminish financial and environmental costs. To achieve this, a management support system that allows for site-specific rapid evaluation of nutrient production imbalances and subsequent management prescriptions is needed for agroecological design. Vector diagnosis, a bivariate model to depict changes in yield and nutritional response simultaneously in a single graph, facilitates identification of nutritional status such as growth dilution, deficiency, sufficiency, luxury uptake, and toxicity. Quantitative data from cocoa agroforestry systems and pigeonpea intercropping trials in Ghana and Tanzania, respectively, were re-evaluated with vector analysis. Relative to monoculture, biomass increase in cocoa ( L.) under shade (35-80%) was accompanied by a 17 to 25% decline in P concentration, the most limiting nutrient on this site. Similarly, increasing biomass with declining P concentrations was noted for pigeonpea [ (L). Millsp.] in response to soil moisture availability under intercropping. Although vector analysis depicted nutrient responses, the current vector model does not consider non-nutrient resource effects on growth, such as ameliorated light and soil moisture, which were particularly active in these systems. We revisit and develop vector analysis into a framework for diagnosing nutrient and non-nutrient interactions in agroforestry systems. Such a diagnostic technique advances management decision-making by increasing nutrient precision and reducing environmental issues associated with agrarian-derived soil contamination. American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America.

Linking plants, fungi and soil mechanics

NASA Astrophysics Data System (ADS)

Yildiz, Anil; Graf, Frank

2017-04-01

Plants provide important functions in respect soil strength and are increasingly considered for slope stabilisation within eco-engineering methods, particularly to prevent superficial soil failure. The protective functions include hydrological regulation through interception and evapo-transpiration as well as mechanical stabilisation through root reinforcement and, to a certain extent, chemical stabilisation through sticky metabolites. The ever-growing application of plants in slope stabilisation demanded more precise information of the vegetation effects and, concomitant, led the models for quantifying the reinforcement shoot up like mushrooms. However, so far, the framework and interrelationships for both the role of plants and the quantification concepts have not been thoroughly analysed and comprehensively considered, respectively, often resulting in unsatisfactory results. Although it seems obvious and is implicitly presupposed that the plant specific functions related to slope stability require growth and development, this is anything but given, particularly under the often hostile conditions dominating on bare and steep slopes. There, the superficial soil layer is often characterised by a lack of fines and missing medium-sized and fine pores due to an unstable soil matrix, predominantly formed by coarse grains. Low water retention capacity and substantial leaching of nutrients are the adverse consequences. Given this general set-up, sustainable plant growth and, particularly, root development is virtually unachievable. At exactly this point mycorrhizal fungi, the symbiotic partners of almost all plants used in eco-engineering, come into play. Though, they are probably well-known within the eco-engineering community, mycorrhizal fungi lead a humble existence. This is in spite of the fact that they supply their hosts with water and nutrients, improving the plant's ability to master otherwise unbridgeable environmental conditions. However, in order to support their plant partners, the fungi themselves need to have access to water and nutrients. For this purpose, a resilient soil matrix consisting of stable micro- and macro-aggregates is an indispensable prerequisite. Luckily, the fungi are among the pioneers in assembling stable aggregates. The fungal hyphae intensively penetrate the unstructured soil body, enmeshing small organic and inorganic soil particles and form and cement them to micro- and macro-aggregates. On the one hand, growing hyphae are able to align primary particles and, on the other hand, exert pressure on surrounding particles and compounds forcing them together, such as clay and organic matter. Under physiological (or neutral) pH values, the fungal mycelia have a net negative charge. It is suggested that negatively charged fungal polysaccharides are bound to negatively charged clay minerals by bridges of polyvalent cations which have been proven to be stronger than some direct bonds between clay and organic matter. The formation of aggregates up to a size of 2 mm is associated with hyphal length of fungi. With regard to the assemblage of aggregates >2 mm both fungal mycelia and roots are involved. Indirectly, the mycorrhizal fungi affect the aggregate establishment through their host plants, particularly by accelerating the development of their root network and by serving as a distribution vector for associated micro-organisms, mainly bacteria and archaea, additionally contributing to cementation. Therefore, root-reinforcement as addressed for quantification of vegetation effects on slope stability almost ever is a combined contribution of fungal mycelia and root networks. With soil aggregates as the "bricks" for building a stable soil matrix and pore structure, root-reinforcement strongly depends on aggregate strength controlling potential, efficiency, and sustainability of growth and development of the protective vegetation. From a geotechnical point of view, aggregation of fines may be such pronounced that characteristics of coarse-grained soils are adopted, often mirrored by higher values of the shear strength parameters, particularly the angle of internal friction Φ'. Consequently, neither the positive relationship between the strength of soil aggregates and slope stability is astonishing nor is the positive correlation between root characteristics - architecture represented by 3D-complexity, specific length and its density - and factor of safety calculations related to superficial soil failure. As far as the latter is concerned, however, so far almost exclusively the common shear strength parameters have been considered, namely angle of internal friction Φ' and root cohesion c'. However, similarly to the way fungi were ignored in biological slope stabilisation, the soil mechanically relevant parameter dilatancy (Ψ) was not in the concepts and modelling approaches for quantifying root-reinforcement. Nevertheless, dilatancy (Ψ) is an important mechanism and a contributing factor to the shearing behaviour of root-permeated soil that definitively cannot be ignored. Such evidence is soundly based on the fact that specific root characteristics combined with the maximum dilatancy angle (Ψmax) can explain the most variation in peak shear strength parameters. Therefore, a combined approach including soil, fungi, and roots under consideration of dilatancy is a promising way towards better understanding and more reliably quantifying the shear strength of root-permeated soil. Since sound quantification of biological stabilisation effects is the key for both sustainable slope stabilisation and wide acceptance of eco-engineering measures within the scope of risk and hazard prevention.

Ectomycorrhizal fungal associates of Pinus contorta in soils associated with a hot spring in Norris Geyser Basin, Yellowstone National Park, Wyoming

NASA Technical Reports Server (NTRS)

Cullings, K.; Makhija, S.

2001-01-01

Molecular methods and comparisons of fruiting patterns (i.e., presence or absence of fungal fruiting bodies in different soil types) were used to determine ectomycorrhizal (EM) associates of Pinus contorta in soils associated with a thermal soil classified as ultra-acidic to extremely acidic (pH 2 to 4). EM were sampled by obtaining 36 soil cores from six paired plots (three cores each) of both thermal soils and forest soils directly adjacent to the thermal area. Fruiting bodies (mushrooms) were collected for molecular identification and to compare fruiting body (above-ground) diversity to below-ground diversity. Our results indicate (i) that there were significant decreases in both the level of EM infection (130 +/- 22 EM root tips/core in forest soil; 68 +/- 22 EM root tips/core in thermal soil) and EM fungal species richness (4.0 +/- 0.5 species/core in forest soil; 1.2 +/- 0.2 species/core in thermal soil) in soils associated with the thermal feature; (ii) that the EM mycota of thermal soils was comprised of a small set of dominant species and included very few rare species, while the EM mycota of forest soils contained a few dominant species and several rare EM fungal species; (iii) that Dermocybe phoenecius and a species of Inocybe, which was rare in forest soils, were the dominant EM fungal species in thermal soils; (iv) that other than the single Inocybe species, there was no overlap in the EM fungal communities of the forest and thermal soils; and (v) that the fungal species forming the majority of the above-ground fruiting structures in thermal soils (Pisolithus tinctorius, which is commonly used in remediation of acid soils) was not detected on a single EM root tip in either type of soil. Thus, P. tinctorius may have a different role in these thermal soils. Our results suggest that this species may not perform well in remediation of all acid soils and that factors such as pH, soil temperature, and soil chemistry may interact to influence EM fungal community structure. In addition, we identified at least one new species with potential for use in remediation of hot acidic soil.

Effect of elevated CO2, O3, and UV radiation on soils.

PubMed

Formánek, Pavel; Rejšek, Klement; Vranová, Valerie

2014-01-01

In this work, we have attempted to review the current knowledge on the impact of elevated CO2, O3, and UV on soils. Elevated CO2 increases labile and stabile soil C pool as well as efficiency of organic pollutants rhizoremediation and phytoextraction of heavy metals. Conversely, both elevated O3 and UV radiation decrease inputs of assimilates to the rhizosphere being accompanied by inhibitory effects on decomposition processes, rhizoremediation, and heavy metals phytoextraction efficiency. Contrary to elevated CO2, O3, or UV-B decreases soil microbial biomass, metabolisable C, and soil N t content leading to higher C/N of soil organic matter. Elevated UV-B radiation shifts soil microbial community and decreases populations of soil meso- and macrofauna via direct effect rather than by induced changes of litter quality and root exudation as in case of elevated CO2 or O3. CO2 enrichment or increased UV-B is hypothesised to stimulate or inhibit both plant and microbial competitiveness for soluble soil N, respectively, whereas O3 favours only microbial competitive efficiency. Understanding the consequences of elevated CO2, O3, and UV radiation for soils, especially those related to fertility, phytotoxins inputs, elements cycling, plant-microbe interactions, and decontamination of polluted sites, presents a knowledge gap for future research.

Xylogenesis in black spruce: does soil temperature matter?

PubMed

Lupi, Carlo; Morin, Hubert; Deslauriers, Annie; Rossi, Sergio

2012-01-01

In boreal ecosystems, an increase in soil temperature can stimulate plant growth. However, cambium phenology in trees was better explained by air than soil temperature, which suggested that soil temperature is not the main limiting factor affecting xylogenesis. Since soil temperature and snowmelt are correlated to air temperature, the question whether soil temperature directly limits xylogenesis in the stem will remain unresolved without experiments disentangling air and soil temperatures. This study investigated the effects of an increase of 4 °C in soil temperature and a consequent 1-week earlier snowmelt on growth of black spruce [Picea mariana (Mill.) BSP] in the boreal forest of Quebec, Canada. The soil of two natural stands at different altitudes was warmed up with heating cables during 2008-2010 and cambial phenology and xylem production were monitored weekly from April to October. The results showed no significant effect of the treatment on the phenological phases of cell enlargement and wall thickening and lignification. The number of cells produced in the xylem also did not differ between control and heated trees. These findings allowed the hypothesis of a direct influence of soil temperature on stem growth to be rejected and supported the evidence that, in the short term, air temperature is the main limiting factor for xylogenesis in trees of these environments.

Role of the interface between distributed fibre optic strain sensor and soil in ground deformation measurement

NASA Astrophysics Data System (ADS)

Zhang, Cheng-Cheng; Zhu, Hong-Hu; Shi, Bin

2016-11-01

Recently the distributed fibre optic strain sensing (DFOSS) technique has been applied to monitor deformations of various earth structures. However, the reliability of soil deformation measurements remains unclear. Here we present an integrated DFOSS- and photogrammetry-based test study on the deformation behaviour of a soil foundation model to highlight the role of strain sensing fibre-soil interface in DFOSS-based geotechnical monitoring. Then we investigate how the fibre-soil interfacial behaviour is influenced by environmental changes, and how the strain distribution along the fibre evolves during progressive interface failure. We observe that the fibre-soil interfacial bond is tightened and the measurement range of the fibre is extended under high densities or low water contents of soil. The plastic zone gradually occupies the whole fibre length when the soil deformation accumulates. Consequently, we derive a theoretical model to simulate the fibre-soil interfacial behaviour throughout the progressive failure process, which accords well with the experimental results. On this basis, we further propose that the reliability of measured strain can be determined by estimating the stress state of the fibre-soil interface. These findings may have important implications for interpreting and evaluating fibre optic strain measurements, and implementing reliable DFOSS-based geotechnical instrumentation.

Increased Electron-Accepting and Decreased Electron-Donating Capacities of Soil Humic Substances in Response to Increasing Temperature.

PubMed

Tan, Wenbing; Xi, Beidou; Wang, Guoan; Jiang, Jie; He, Xiaosong; Mao, Xuhui; Gao, Rutai; Huang, Caihong; Zhang, Hui; Li, Dan; Jia, Yufu; Yuan, Ying; Zhao, Xinyu

2017-03-21

The electron transfer capacities (ETCs) of soil humic substances (HSs) are linked to the type and abundance of redox-active functional moieties in their structure. Natural temperature can affect the chemical structure of natural organic matter by regulating their oxidative transformation and degradation in soil. However, it is unclear if there is a direct correlation between ETC of soil HS and mean annual temperature. In this study, we assess the response of the electron-accepting and -donating capacities (EAC and EDC) of soil HSs to temperature by analyzing HSs extracted from soil set along glacial-interglacial cycles through loess-palaeosol sequences and along natural temperature gradients through latitude and altitude transects. We show that the EAC and EDC of soil HSs increase and decrease, respectively, with increasing temperature. Increased temperature facilitates the prevalence of oxidative degradation and transformation of HS in soils, thus potentially promoting the preferentially oxidative degradation of phenol moieties of HS or the oxidative transformation of electron-donating phenol moieties to electron-accepting quinone moieties in the HS structure. Consequently, the EAC and EDC of HSs in soil increase and decrease, respectively. The results of this study could help to understand biogeochemical processes, wherein the redox functionality of soil organic matter is involved in the context of increasing temperature.

Effect of Elevated CO2, O3, and UV Radiation on Soils

PubMed Central

Rejšek, Klement; Vranová, Valerie

2014-01-01

In this work, we have attempted to review the current knowledge on the impact of elevated CO2, O3, and UV on soils. Elevated CO2 increases labile and stabile soil C pool as well as efficiency of organic pollutants rhizoremediation and phytoextraction of heavy metals. Conversely, both elevated O3 and UV radiation decrease inputs of assimilates to the rhizosphere being accompanied by inhibitory effects on decomposition processes, rhizoremediation, and heavy metals phytoextraction efficiency. Contrary to elevated CO2, O3, or UV-B decreases soil microbial biomass, metabolisable C, and soil Nt content leading to higher C/N of soil organic matter. Elevated UV-B radiation shifts soil microbial community and decreases populations of soil meso- and macrofauna via direct effect rather than by induced changes of litter quality and root exudation as in case of elevated CO2 or O3. CO2 enrichment or increased UV-B is hypothesised to stimulate or inhibit both plant and microbial competitiveness for soluble soil N, respectively, whereas O3 favours only microbial competitive efficiency. Understanding the consequences of elevated CO2, O3, and UV radiation for soils, especially those related to fertility, phytotoxins inputs, elements cycling, plant-microbe interactions, and decontamination of polluted sites, presents a knowledge gap for future research. PMID:24688424

The potential of agricultural practices to increase C storage in cropped soils: an assessment for France

NASA Astrophysics Data System (ADS)

Chenu, Claire; Angers, Denis; Métay, Aurélie; Colnenne, Caroline; Klumpp, Katja; Bamière, Laure; Pardon, Lenaic; Pellerin, Sylvain

2014-05-01

Though large progress has been achieved in the last decades, net GHG emissions from the agricultural sector are still more poorly quantified than in other sectors. In this study, we examined i) technical mitigation options likely to store carbon in agricultural soils, ii) their potential of additional C storage per unit surface area and iii) applicable areas in mainland France. We considered only agricultural practices being technically feasible by farmers and involving no major change in either production systems or production levels. Moreover, only currently available techniques with validated efficiencies and presenting no major negative environmental impacts were taken into account. Four measures were expected to store additional C in agricultural soils: - Reducing tillage: either a switch to continuous direct seeding, direct seeding with occasional tillage once every five years, or continuous superficial (<15 cm) tillage. - Introducing cover crops in cropping systems: sown between two cash crops on arable farms, in orchards and vineyards (permanent or temporary cover cropping) . - Expanding agroforestry systems; planting of tree lines in cultivated fields and grasslands, and hedges around the field edges. - Increasing the life time of temporary sown grasslands: increase of life time to 5 years. The recent literature was reviewed in order to determine long term (>20yrs) C storage rates (MgC ha-1 y-1,) of cropping systems with and without the proposed practice. Then we analysed the conditions for potential application, in terms of feasibility, acceptance, limitation of yield losses and of other GHG emissions. According to the literature, additional C storage rates were 0.15 (0-0.3) MgC ha-1 y-1 for continuous direct seeding, 0.10 (0-0.2) MgC ha-1 y-1for occasional tillage one year in five, and 0.0 MgC ha-1 y-1 for superficial tillage. Cover crops were estimated to store 0.24 (0.13-0.37) MgC ha-1 y-1 between cash crops and 0.49 (0.23-0.72) MgC ha-1 y-1 when associated with vineyards. Hedges (i.e 60 m ha-1) stored 0.15 (0.05-0.26) Mg C ha-1 y-1. Very few estimates were available for temperate agroforestry system, and we proposed a value of 1.01 (0.11-1.36) Mg C ha-1 y-1for C stored in soil and in the tree biomass for systems comprising 30-50 trees ha-1. Increasing the life time of temporary sown grassland increased C stocls by 0.11 (0.07-0.22) Mg C ha-1 y-1. In general, practices with increased C inputs to soil through additional plant biomass (agroforestry, hedges and cover crops) resulted in higher additional C storage rates, while the reduction of soil organic matter mineralisation through reduced tillage seemed less effective. When applied to the French agricultural sector, excluding areas with soils with major technical constraints or negative environmental consequences (e.g. poorly aerated soils with high N2O emissions), the measures considered here allowed to increase French soil C stocks by 0 to more than 1 Tg C y-1. However, our estimates are associated with high uncertainties, due to the high variability in soil C storage associated with pedo-climatic conditions and cropping systems, and on the very few studies available for some practices such as agroforestry under temperate conditions.

Archeological Testing of Sites 32CS42 and 32CS44, Cass County, North Dakota.

DTIC Science & Technology

1988-09-01

t .ia Soi ’ ’ * • t ! I I ! I * I 3 3 a 1 - Soil Association , , , Ecozone i Area Signf . , , MS Number I’ ~ ,Soil Association - , , Ecozone .Area... Ecozone , Area Signf I l MS Number ,t .J ,Soil Association -.- Ecozone , Area Signf , , 1 MS Number , , CR Type L._Verified Site _. Non-Site Li E C F...Association , , jEcozone Area Signf , MS Number L .. Soil Association . Ecozone ,, Area Signf ’ , , , ’ MS Number CR Type -Verified Site L__Non-Site E C F

Effects of waste water irrigation on soil properties and soil fauna of spinach fields in a West African urban vegetable production system.

PubMed

Stenchly, Kathrin; Dao, Juliane; Lompo, Désiré Jean-Pascal; Buerkert, Andreas

2017-03-01

The usage of inadequately processed industrial waste water (WW) can lead to strong soil alkalinity and soil salinization of agricultural fields with negative consequences on soil properties and biota. Gypsum as a soil amendment to saline-sodic soils is widely used in agricultural fields to improve their soil physical, chemical and hence biological properties. This study aimed at analysing the effects of intensive WW irrigation on the structure and composition of soil-dwelling arthropods on spinach fields (Spinacia oleracea L.) in a West African urban vegetable production system. We used gypsum as a soil amendment with the potential to alleviate soil chemical stress resulting in a potentially positive impact on soil arthropods. A total of 32 plots were established that showed a gradient in soil pH ranging from slight to strong soil alkalinity and that were irrigated with WW (n = 12) or clean water (CW; n = 20), including eight plots into which gypsum was incorporated. Our study revealed a high tolerance of soil-dwelling arthropods for alkaline soils, but spinach fields with increased soil electrical conductivity (EC) showed a reduced abundance of Hymenoptera, Diptera and Auchenorrhyncha. Arthropod abundance was positively related to a dense spinach cover that in turn was not affected by WW irrigation or soil properties. Gypsum application reduced soil pH but increased soil EC. WW irrigation and related soil pH affected arthropod composition in the investigated spinach fields which may lead to negative effects on agronomical important arthropod groups such as pollinators and predators. Copyright © 2017 Elsevier Ltd. All rights reserved.

10Be inventories in Alpine soils and their potentiality for dating land surfaces

NASA Astrophysics Data System (ADS)

Egli, Markus; Brandová, Dagmar; Böhlert, Ralph; Favilli, Filippo; Kubik, Peter W.

2010-05-01

To exploit natural archives and geomorphic objects it is necessary to date them first. Landscape evolution of Alpine areas is often strongly related to the activities of glaciers in the Pleistocene and Holocene. At sites where no organic matter for radiocarbon dating exists and where suitable boulders for surface exposure dating (using in situ produced cosmogenic nuclides) are absent, dating of soils could give information about the timing of landscape evolution. We explored the applicability of soil dating using the inventory of meteoric Be-10 in Alpine soils. For this purpose, a set of 6 soil profiles in the Swiss and Italian Alps was investigated. The surface at these sites had already been dated (using the radiocarbon technique or surface exposure dating using in situ produced Be-10). Consequently, a direct comparison of the ages of the soils using meteoric Be-10 and other dating techniques was made possible. The estimation of Be-10 deposition rates is subject to severe limitations and strongly influences the obtained results. We tested three scenarios using a) the meteoric Be-10 deposition rates as a function of the annual precipitation rate, b) a constant Be-10 input for the Central Alps and c) as b) but assuming a pre-exposure of the parent material. The obtained ages that are based on the Be-10 inventory in soils and on scenario a) for the Be-10 input agreed reasonably well with the expected age (obtained from surface exposure or radiocarbon dating). The ages obtained from soils using scenario b) produced mostly ages that were too old whereas the approach using scenario c) seemed to yield better results than scenario b). Erosion calculations can, in theory, be performed using the Be-10 inventory and Be-10 deposition rates. An erosion estimation was possible using scenario a) and c), but not using b). The estimated erosion rates are in a reasonable range. The dating of soils using Be-10 has several potential error sources. Analytical errors as well as errors from other parameters such as bulk soil density and soil skeleton content have to be taken into account. The error range was from 8 up to 21%. Furthermore, uncertainties in estimating Be-10 deposition rates substantially influence the calculated ages. Relative age estimates and, under optimal conditions, a numerical dating can be carried out. Age determination of Alpine soils using Be-10 gives another possibility to date surfaces when other methods fail or are not possible at all. It is, however, not straightforward, quite laborious and may consequently have some distinct limitations.

soil organic matter pools and quality are sensitive to global climate change in tropical forests from India

NASA Astrophysics Data System (ADS)

Mani, Shanmugam; Merino, Agustín; García-Oliva, Felipe; Riotte, Jean; Sukumar, Raman

2016-04-01

Soil organic carbon (SOC) storage and quality are some of the most important factors determining ecological process in tropical forests, which are especially sensitive to global climate change (GCC). In India, the GCC scenarios expect increasing of drought period and wildfire, which may affect the SOC, and therefore the capacity of forest for C sequestration. The aim of the study was to evaluate the amount of soil C and its quality in the mineral soil across precipitation gradient with different factors (vegetation, pH, soil texture and bedrock composition) for generate SOC predictions under GCC. Six soil samples were collected (top 10 cm depth) from 19 1-ha permanent plots in the Mudumalai Wildlife Sanctuary of southern India, which are characterised by four types of forest vegetation (i.e. dry thorn, dry deciduous, moist deciduous and semi-evergreen forest) distributed along to rainfall gradient. The driest sites are dominated by sandy soils, while the soil clay proportion increased in the wet sites. Total organic C (Leco CN analyser), and the SOM quality was assessed by Differential Scanning Calorimetry (DSC) and Solid-state 13CCP-MAS NMR analyses. Soil organic C was positively correlated with precipitation (R2 = 0.502, p<0.01) and with soil clay content (R2 =0.15, p<0.05), and negatively with soil sand content (R2=0.308, p<0.001) and with pH (R2=0.529, p<0.01); while the C/N was only found positive correlation with clay (R2= 0.350, p<0.01). The driest sites (dry thorn forest) has the lowest proportion of thermal combustion of recalcitrant organic matter (Q2,375-475 °C) than the other sites (p<0.05) and this SOC fraction correlated positively with rainfall (R2=0.27, p=0.01). The Q2 model with best fit included rainfall, pH, sand, clay, C and C/N (R2=0.52, p=0.01). Principal component analysis explains 77% of total variance. The sites on the fist component are distributed along the rainfall gradient. These results suggest that the 50% of variance was explained by precipitation and therefore vegetation type. Consequently, the drier sites has a lower C pools with a higher proportion of labile SOC fraction. As a consequence, we expect if the rainfall decreased by GCC could increase SOC mineralization, and therefore reducing the capacity of C sequestration within soil profile.

Production and reduction of nitrous oxide in agricultural and forest soils.

PubMed

Yu, K; Chen, G; Struwe, S; Kjøller, A

2000-06-01

A soil-water slurry experiment was conducted to study the potentials of N2O production and reduction in denitrification of agricultural and beech forest soils in Denmark. The effects of nitrate and ammonium additions on denitrification were also investigated. The forest soil showed a higher denitrification potential than the agricultural soil. However, N2O reduction potential of the agricultural soil was higher than the beech forest soil, shown by the ratio of N2O/N2 approximately 0.11 and 3.65 in the agricultural and the beech forest soils, respectively. Both nitrate and ammonium additions stimulated the N2O production in the two soils, but reduced the N2O reduction rates in the agricultural soil slurries. In contrast to the effect on the agricultural soil, nitrate reduced the N2O reduction rate in the beech forest soil, while ammonium showed a stimulating effect on the N2O reduction activity. After one week incubation, all of the N2O produced was reduced to N2 in the agricultural soil when nitrate was still present. Nitrous oxide reduction in the beech forest soil occurred only when nitrate almost disappeared. The different nitrate inhibitory effect on the N2O reduction activity in the two soils was due to the difference in soil pH. Inhibition of nitrate on N2O reduction was significant under acidic condition. Consequently, soil could serve as a sink of atmospheric N2O under the conditions of anaerobic, pH near neutral and low nitrate content.

Soils, time, and primate paleoenvironments

USGS Publications Warehouse

Bown, T.M.; Kraus, M.J.

1993-01-01

Soils are the skin of the earth. From both poles to the equator, wherever rocks or sediment are exposed at the surface, soils are forming through the physical and chemical action of climate and living organisms. The physical attributes (color, texture, thickness) and chemical makeup of soils vary considerably, depending on the composition of the parent material and other variables: temperature, rainfall and soil moisture, vegetation, soil fauna, and the length of time that soil-forming processes have been at work. United States soil scientists1 have classified modern soils into ten major groups and numerous subgroups, each reflecting the composition and architecture of the soils and, to some extent, the processes that led to their formation. The physical and chemical processes of soil formation have been active throughout geologic time; the organic processes have been active at least since the Ordovician.2 Consequently, nearly all sedimentary rocks that were deposited in nonmarine settings and exposed to the elements contain a record of ancient, buried soils or paleosols. A sequence of these rocks, such as most ancient fluvial (stream) deposits, provides a record of soil paleoenvironments through time. Paleosols are also repositories of the fossils of organisms (body fossils) and the traces of those organisms burrowing, food-seeking, and dwelling activities (ichnofossils). Indeed, most fossil primates are found in paleosols. Careful study of ancient soils gives new, valuable insights into the correct temporal reconstruction of the primate fossil record and the nature of primate paleoenvironments. ?? 1993 Wiley-Liss, Inc.

Modelling fungal growth in heterogeneous soil: analyses of the effect of soil physical structure on fungal community dynamics

NASA Astrophysics Data System (ADS)

Falconer, R.; Radoslow, P.; Grinev, D.; Otten, W.

2009-04-01

Fungi play a pivital role in soil ecosystems contributing to plant productivity. The underlying soil physical and biological processes responsible for community dynamics are interrelated and, at present, poorly understood. If these complex processes can be understood then this knowledge can be managed with an aim to providing more sustainable agriculture. Our understanding of microbial dynamics in soil has long been hampered by a lack of a theoretical framework and difficulties in observation and quantification. We will demonstrate how the spatial and temporal dynamics of fungi in soil can be understood by linking mathematical modelling with novel techniques that visualise the complex structure of the soil. The combination of these techniques and mathematical models opens up new possibilities to understand how the physical structure of soil affects fungal colony dynamics and also how fungal dynamics affect soil structure. We will quantify, using X ray tomography, soil structure for a range of artificially prepared microcosms. We characterise the soil structures using soil metrics such as porosity, fractal dimension, and the connectivity of the pore volume. Furthermore we will use the individual based fungal colony growth model of Falconer et al. 2005, which is based on the physiological processes of fungi, to assess the effect of soil structure on microbial dynamics by qualifying biomass abundances and distributions. We demonstrate how soil structure can critically affect fungal species interactions with consequences for biological control and fungal biodiversity.

Understanding soil erosion impacts in temperate agroecosystems: bridging the gap between geomorphology and soil ecology using nematodes as a model organism

NASA Astrophysics Data System (ADS)

Baxter, C.; Rowan, J. S.; McKenzie, B. M.; Neilson, R.

2013-11-01

Soil is a key asset of natural capital, providing a myriad of goods and ecosystem services that sustain life through regulating, supporting and provisioning roles, delivered by chemical, physical and biological processes. One of the greatest threats to soil is accelerated erosion, which raises a natural process to unsustainable levels, and has downstream consequences (e.g.~economic, environmental and social). Global intensification of agroecosystems is a recognised major cause of soil erosion which, in light of predicted population growth and increased demand for food security, will continue or increase. Transport and redistribution of biota by soil erosion has hitherto been ignored and thus is poorly understood. With the move to sustainable intensification this is a key knowledge gap that needs to be addressed. Here we highlight the erosion-energy and effective-erosion-depth continuum in soils, differentiating between different forms of soil erosion, and argue that nematodes are an appropriate model taxa to investigate impacts of erosion on soil biota across scales. We review the different known mechanisms of soil erosion that impact on soil biota in general, and nematodes in particular, and highlight the few detailed studies, primarily from tropical regions, that have considered soil biota. Based on the limited literature and using nematodes as a model organism we outline future research priorities to initially address the important interrelationships between soil erosion processes and soil biota.

Climate response of the soil nitrogen cycle in three forest types of a headwater Mediterranean catchment

NASA Astrophysics Data System (ADS)

Lupon, Anna; Gerber, Stefan; Sabater, Francesc; Bernal, Susana

2015-05-01

Future changes in climate may affect soil nitrogen (N) transformations, and consequently, plant nutrition and N losses from terrestrial to stream ecosystems. We investigated the response of soil N cycling to changes in soil moisture, soil temperature, and precipitation across three Mediterranean forest types (evergreen oak, beech, and riparian) by fusing a simple process-based model (which included climate modifiers for key soil N processes) with measurements of soil organic N content, mineralization, nitrification, and concentration of ammonium and nitrate. The model describes sources (atmospheric deposition and net N mineralization) and sinks (plant uptake and hydrological losses) of inorganic N from and to the 0-10 cm soil pool as well as net nitrification. For the three forest types, the model successfully recreated the magnitude and temporal pattern of soil N processes and N concentrations (Nash-Sutcliffe coefficient = 0.49-0.96). Changes in soil water availability drove net N mineralization and net nitrification at the oak and beech forests, while temperature and precipitation were the strongest climatic factors for riparian soil N processes. In most cases, net N mineralization and net nitrification showed a different sensitivity to climatic drivers (temperature, soil moisture, and precipitation). Our model suggests that future climate change may have a minimal effect on the soil N cycle of these forests (<10% change in mean annual rates) because positive warming and negative drying effects on the soil N cycle may counterbalance each other.

Soil-plant transfer models for metals to improve soil screening value guidelines valid for São Paulo, Brazil.

PubMed

Dos Santos-Araujo, Sabrina N; Swartjes, Frank A; Versluijs, Kees W; Moreno, Fabio Netto; Alleoni, Luís R F

2017-11-07

In Brazil, there is a lack of combined soil-plant data attempting to explain the influence of specific climate, soil conditions, and crop management on heavy metal uptake and accumulation by plants. As a consequence, soil-plant relationships to be used in risk assessments or for derivation of soil screening values are not available. Our objective in this study was to develop empirical soil-plant models for Cd, Cu, Pb, Ni, and Zn, in order to derive appropriate soil screening values representative of humid tropical regions such as the state of São Paulo (SP), Brazil. Soil and plant samples from 25 vegetable species in the production areas of SP were collected. The concentrations of metals found in these soil samples were relatively low. Therefore, data from temperate regions were included in our study. The soil-plant relations derived had a good performance for SP conditions for 8 out of 10 combinations of metal and vegetable species. The bioconcentration factor (BCF) values for Cd, Cu, Ni, Pb, and Zn in lettuce and for Cd, Cu, Pb, and Zn in carrot were determined under three exposure scenarios at pH 5 and 6. The application of soil-plant models and the BCFs proposed in this study can be an important tool to derive national soil quality criteria. However, this methodological approach includes data assessed under different climatic conditions and soil types and need to be carefully considered.

Contribution of calcium oxalate to soil-exchangeable calcium

USGS Publications Warehouse

Dauer, Jenny M.; Perakis, Steven S.

2013-01-01

Acid deposition and repeated biomass harvest have decreased soil calcium (Ca) availability in many temperate forests worldwide, yet existing methods for assessing available soil Ca do not fully characterize soil Ca forms. To account for discrepancies in ecosystem Ca budgets, it has been hypothesized that the highly insoluble biomineral Ca oxalate might represent an additional soil Ca pool that is not detected in standard measures of soil-exchangeable Ca. We asked whether several standard method extractants for soil-exchangeable Ca could also access Ca held in Ca oxalate crystals using spike recovery tests in both pure solutions and soil extractions. In solutions of the extractants ammonium chloride, ammonium acetate, and barium chloride, we observed 2% to 104% dissolution of Ca oxalate crystals, with dissolution increasing with both solution molarity and ionic potential of cation extractant. In spike recovery tests using a low-Ca soil, we estimate that 1 M ammonium acetate extraction dissolved sufficient Ca oxalate to contribute an additional 52% to standard measurements of soil-exchangeable Ca. However, in a high-Ca soil, the amount of Ca oxalate spike that would dissolve in 1 M ammonium acetate extraction was difficult to detect against the large pool of exchangeable Ca. We conclude that Ca oxalate can contribute substantially to standard estimates of soil-exchangeable Ca in acid forest soils with low soil-exchangeable Ca. Consequently, measures of exchangeable Ca are unlikely to fully resolve discrepancies in ecosystem Ca mass balance unless the contribution of Ca oxalate to exchangeable Ca is also assessed.

Sorption, Leaching, and Surface Runoff of Beef Cattle Veterinary Pharmaceuticals under Simulated Irrigated Pasture Conditions

PubMed Central

Popova, Inna E.; Bair, Daniel A.; Tate, Kenneth W.; Parikh, Sanjai J.

2014-01-01

The use of veterinary pharmaceuticals in beef cattle has led to concerns associated with the development of antibiotic resistance in bacteria and endocrine disruption in aquatic organisms. Despite the potential negative consequences, data on the transport and mitigation of pharmaceuticals in grazed watersheds with irrigated pasture are scarce. The objective of this study was to assess the transport of common beef cattle pharmaceuticals (i.e., oxytetracycline, chlortetracycline, ivermectin) via surface runoff and leachate from manure amended to grass-vegetated soil boxes under irrigated pasture conditions. The transport of pharmaceuticals from animal manure in surface runoff and soil leachate was relatively low and appears to be limited by desorption and transport of pharmaceuticals entrained in the manure. In surface runoff, less than 4.2% of applied pharmaceuticals in manure (initial concentration: 0.2 mg kg−1 of manure) were detected after three weeks of irrigation. Concentrations of pharmaceuticals in surface runoff and leachate never exceeded 0.5 µg L−1. The major portion of pharmaceuticals (up to 99%) was retained in the manure or in the soil directly beneath the manure application site. Based on the minimal transport of oxytetracycline, chlortetracycline, and ivermectin, the risk of significant transport for these targeted beef cattle pharmaceuticals to surface water and groundwater from manure on irrigated pasture appears to be relatively low. PMID:24216368

Salvage logging effect on soil properties in a fire-affected Mediterranean forest: a two years monitoring research

NASA Astrophysics Data System (ADS)

Mataix-Solera, Jorge; Moltó, Jorge; Arcenegui, Vicky; García-Orenes, Fuensanta; Chrenkovà, Katerina; Torres, Pilar; Jara-Navarro, Ana B.; Díaz, Gisela; Izquierdo, Ezequiel

2015-04-01

In the Mediterranean countries, forest fires are common and must be considered as an ecological factor, but changes in land use, especially in the last five decades have provoked a modification in their natural regime. Moreover, post-fire management can have an additional impact on the ecosystem; in some cases, even more severe than the fire. Salvage logging is a traditional management in most fire-affected areas. In some cases, the way of doing it, using heavy machinery, and the vulnerability of soils to erosion and degradation make this management potentially very agresive to soil, and therefore to the ecosystem. Very little research has been done to study how this treatment could affect soil health. In this research we show 2 years of monitoring of some soil properties in an area affected by a forest fire, where some months later this treatment was applied. The study area is located in 'Sierra de Mariola Natural Park' in Alcoi, Alicante (E Spain). A big forest fire (>500 has) occurred in July 2012. The forest is composed mainly of Pinus halepensis trees with an understory of typical Mediterranean shrubs species such as Quercus coccifera, Rosmarinus officinalis, Thymus vulgaris, Brachypodium retusum, etc. Soil is classified as a Typic Xerorthent (Soil Survey Staff, 2014) developed over marls. In February 2013, salvage logging (SL) treatment consisting in a complete extraction of the burned wood using heavy machinery was applied in a part of the affected forest. Plots for monitoring this effect were installed in this area and in a similar nearby area where no treatment was done, and then used as control (C) for comparison. Soil samplings were done immediately after treatment and every 6 months. Some soil properties were analysed, including soil organic matter (SOM) content, basal soil respiration (BSR), microbial biomass carbon (MBC), bulk density (BD), soil water repellency (SWR), aggregate stability (AS), field capacity, nitrogen, etc. After two years of research, results showed significant soil degradation as a consequence of the salvage logging treatment. Most of the soil parameters studied showed differences between control and salvage logging treatments, SOM content in first 2.5 cm of topsoil being less than half in SL plots in comparison with C plots. BSR, MBC and AS were also statistically significant lower in SL plots. BD increased as a consequence of SL treatment. In conclusion, we can affirm that with this type of soil, which is very vulnerable to soil degradation, this treatment has a very negative effect on the ecosystem; this was also reflected in the abundance and diversity of plant species. Acknowledgements: to the 'Ministerio de Economía and Competitividad' of Spanish Government for finance the POSTFIRE project (CGL2013- 47862-C2-1-R), Spanish Soil Science Society, FUEGORED, Alcoi council, ACIF Alcoi, and Sierra de Mariola Natural Park for their support.

Land-use intensification can exaggerate the reduction of functionality with increasing soil biodiversity loss in an alpine meadow on eastern Tibetan Plateau

NASA Astrophysics Data System (ADS)

Liu, Manqiang; Chen, Xiaoyun; Chen, Chenying; Hu, Zhengkun; Guo, Hui; Li, Junyong; Du, Guozhen; Li, Huixin; Hu, Feng

2017-04-01

Soil biota plays a pivotal role in ecosystem functionality which is of central importance to sustainable services such as food and fiber production. Intensive land use is associated with species loss and subsequent the related functionality loss. Currently, the claim that negligible effects of soil biodiversity loss due to high functional redundancy has been questioned in the face of intense human activities. Recent studies corroborated that soil biodiversity guaranteed functionality following perturbation. Few studies have, however, attempted to explore the intensive land use on the relationship between soil biodiversity and function particularly for the region susceptible to human perturbation and climate change. With increasing demands for livestock on the Qinghai-Tibetan Plateau, extensive fertilization is a common way to fill the gap of grass productivity in the alpine meadow. However, excess chemical fertilizer can lead to the species loss and functionality degradation. Do the fertilizer-induced changes in soil biota lead to a higher risk of functionality? We predicted that fertilization would exacerbate effects of biodiversity-loss on the reduction of functionality. Herein, a dilution-to-extinction approach was used to set up soil biodiversity loss by inoculating serially diluted soil suspension (ranging from 100 to 10-8 levels) from two long-term fertilization treatments to the sterilized soil that has never been fertilized. The two fertilization treatments represented two distinct intensification land use including the unfertilized control (NP0) and a fertilized treatment (NP120) amended with (NH4)2HPO4 annually (120 kg ha-1 yr-1) since 2002 in an alpine meadow on the eastern Qinghai-Tibetan Plateau. Soil microcosms of 2 fertilization levels crossing 8 biodiversity levels were incubated for 8 months. Then, soil community and multi-functionality parameters including carbon (C)and nutrient mineralization, plant growth and functional stability were determined. Dilution resulted in the increasing biodiversity loss indicated by genotypic information (high-throughput sequencing), phenotypic biomarkers (phospholipid fatty acid analysis) and functional profiles enzyme activities and sole C utilization potential). Notably, the decreasing genotypic diversity with dilution was most apparent among the three measured diversity traits, showing high phenotypic and functional redundancy. Fertilization decreased biodiversity, which was associated with the initial community properties. During the 8 months of incubation, the more diversity loss led to the less respired CO2 and correspondingly the more organic C remained in soil, supporting that biodiversity is central for the capability of resource utilization. Fertilization aggravated the decreased extent of C utilization potential particularly at lower biodiversity. Plant biomass and nutrient (nitrogen and phosphorus) uptake depended on the interactions of biodiversity loss and fertilization, showing fertilization-triggered more reductions of functionality with biodiversity loss, which was more related to the diversity and composition of phenotypic and functional profiles than molecular diversity. Out of our expectation, fertilization decreased the functional stability (measured as the decomposition of dead roots following transient heating stress) for high biodiversity treatments but increased it at lower biodiversity. Moreover, enzyme activity pattern indicated low biodiversity treatments were associated labile C transformation, while high biodiversity had high capability in utilizing recalcitrant C. We conclude that changes of community composition and biodiversity by intensive land use can increase the risk of losing diversity insurance on multifunctionality. Future work about the relationship between soil biodiversity and functionality should extrapolate to larger temporal and spatial scales. Exploring the response of fertilization-induced consequence to further biodiversity loss would contribute to understand the mechanisms of ecosystem process and sustainable manage the susceptible alpine meadow ecosystem. Keywords: Biodiversity-ecosystem function; Land-use intensification; Plant productivity; Alpine meadow; Functional diversity

Vertical distribution of soil organic carbon originated from a prior peatland in Greece and impacts on the landscape, after conversion to arable land

NASA Astrophysics Data System (ADS)

Kayrotis, Theodore; Charoulis, A.; Vavoulidou, E.; Tziouvalekas, M.

2010-05-01

The vertical distribution and the status of soil organic carbon (Corg.) in 66 surface and subsurface soil samples were investigated. These soils originated mainly from organic deposits of Philippoi (northern Greece) have been classified as Histosols and belong to the suborder of Saprists. The present study consisted of an area of 10,371 ha where about 90% of the soils are organic. The main crops are maize (Zea mays L.), sugar beets (Beta vulgaris L.), tobacco (Nicotiana tabacum L.), cotton (Gossypium hirsutum L.), tomatoes (Lycopersicon esculentum Mill.), and wheat (Triticum aestivum L.).The surface horizons consist mainly of well-humified organic materials mixed with mineral soil particles. Usually, they have moderate or insufficient drainage regime and conditions become favorable for microbial growth. Microbes decompose and transform the soil organic compounds into mineral forms, which are then available as nutrients for the crop. The organic matter was derived primarily from Cyperaceae (Cladium mariscus, various Carex species, etc.) and from decomposed residues of arable crops. The dominant features of these soils are the high content of organic matter and the obvious stratification of soil horizons. In contrast, most arable soils in Greece are characterized by low organic matter content. The stratification differentiates the physical and chemical properties and the groundwater table even during dry summers lies at depths,150 cm beneath surface. The Corg. content was high and varied greatly among the examined samples. In the surface layers ranged between 3.57 and 336.50 g kg2 (mean 199.26 g kg2) and between 22.10 and 401.10 g kg2 in the subsurface horizons (mean 258.89 g kg2). It can be argued that surface layers are drier and part of soil organic matter was seriously affected by the process of oxidation. At drier sites, soil subsidence was appeared as a consequence of soil organic matter oxidation. Increased contents were found in the northern part of the studied area, where soil moisture is usually higher. Similarly, higher contents were found at low-lying places or in hollows, due to drainage and consequent cultivation in the plowing horizons. The Corg. was highly correlated with total soil nitrogen, which is mainly bound into the soil organic matter. The studied soils are vulnerable to management, which strongly affects their properties. Under thermic temperature conditions, soils located in the slopping margin, where moisture regime is drier, can be decomposed relatively easier and faster. Rational water management, tillage practices, avoidance of heavy machinery, and proper fertilization could contribute to the soil and water quality, without significant yield reduction. Furthermore, a set of additional measures in the examined organic soils can be applied, such as: banning of plant residues burning, avoidance of deep ploughing, maintenance of a shallow water table and the partial conversion of arable soils into pasture land. Potential alternative uses and a number of practices can be suggested for proper soil management, such as: incorporation of crop residues after harvesting into subsoil, implementation of proper rotation schemes, and in some cases rational fertilsation and irrigation management to increase productivity. This investigation also provides a quantitative estimation of the soil carbon status per hectare, and an attempt was made for the interpretation of factors which affect the distribution of Corg. within the examined surface and subsurface soil layers.

Seasonally frozen layer in natural and drained peatlands at the South of West Siberia, Russia

NASA Astrophysics Data System (ADS)

Dyukarev, Egor; Kiselev, Maxim; Voropay, Nadezhda; Preis, Yulia

2017-04-01

The temperature regime of soils in natural and drained peatlands at Bakchar bog located in the South Taiga zone of West Siberia is studied. Soil temperature for depths up to 320 cm was registered using autonomous temperature profile recorder during the period from August 2010 to September 2016. Maximal and minimal temperatures were registered at surface in July and February, consequently. Extreme soil temperatures at 320 cm depth shifts to December (maximum) and July (minimum) reducing absolute values. Annual peat soil temperature amplitude decrease with depth from 21,8 °C on surface to 1,1 °C at 320 cm. The analysis of daily, month and annual mean data of temperature in peat soil has shown that seasonally frozen layer was registered up to 20-60 cm depth. The duration of seasonally freeze layer existence varies from 130 to 180 days. Drained peatlands with the lowest water table have highest freeze depth. Soil at water-logged sedge-sphagnum fen in winter is warmer than soil in ryam ecosystem and mineral soil at upland. Maximal freezing depth in peatlands is up to 3 times lower than at drain areas.

Exfiltrometer apparatus and method for measuring unsaturated hydrologic properties in soil

DOEpatents

Hubbell, Joel M.; Sisson, James B.; Schafer, Annette L.

2006-01-17

Exfiltrometer apparatus includes a container for holding soil. A sample container for holding sample soil is positionable with respect to the container so that the sample soil contained in the sample container is in communication with soil contained in the container. A first tensiometer operatively associated with the sample container senses a surface water potential at about a surface of the sample soil contained in the sample container. A second tensiometer operatively associated with the sample container senses a first subsurface water potential below the surface of the sample soil. A water content sensor operatively associated with the sample container senses a water content in the sample soil. A water supply supplies water to the sample soil. A data logger operatively connected to the first and second tensiometers, and to the water content sensor receives and processes data provided by the first and second tensiometers and by the water content sensor.