Critical soil conditions for oxygen stress to plant roots: Substituting the Feddes-function by a process-based model

NASA Astrophysics Data System (ADS)

Bartholomeus, Ruud P.; Witte, Jan-Philip M.; van Bodegom, Peter M.; van Dam, Jos C.; Aerts, Rien

2008-10-01

SummaryEffects of insufficient soil aeration on the functioning of plants form an important field of research. A well-known and frequently used utility to express oxygen stress experienced by plants is the Feddes-function. This function reduces root water uptake linearly between two constant pressure heads, representing threshold values for minimum and maximum oxygen deficiency. However, the correctness of this expression has never been evaluated and constant critical values for oxygen stress are likely to be inappropriate. On theoretical grounds it is expected that oxygen stress depends on various abiotic and biotic factors. In this paper, we propose a fundamentally different approach to assess oxygen stress: we built a plant physiological and soil physical process-based model to calculate the minimum gas filled porosity of the soil ( ϕgas_min) at which oxygen stress occurs. First, we calculated the minimum oxygen concentration in the gas phase of the soil needed to sustain the roots through (micro-scale) diffusion with just enough oxygen to respire. Subsequently, ϕgas_min that corresponds to this minimum oxygen concentration was calculated from diffusion from the atmosphere through the soil (macro-scale). We analyzed the validity of constant critical values to represent oxygen stress in terms of ϕgas_min, based on model simulations in which we distinguished different soil types and in which we varied temperature, organic matter content, soil depth and plant characteristics. Furthermore, in order to compare our model results with the Feddes-function, we linked root oxygen stress to root water uptake (through the sink term variable F, which is the ratio of actual and potential uptake). The simulations showed that ϕgas_min is especially sensitive to soil temperature, plant characteristics (root dry weight and maintenance respiration coefficient) and soil depth but hardly to soil organic matter content. Moreover, ϕgas_min varied considerably between soil types and was larger in sandy soils than in clayey soils. We demonstrated that F of the Feddes-function indeed decreases approximately linearly, but that actual oxygen stress already starts at drier conditions than according to the Feddes-function. How much drier is depended on the factors indicated above. Thus, the Feddes-function might cause large errors in the prediction of transpiration reduction and growth reduction through oxygen stress. We made our method easily accessible to others by implementing it in SWAP, a user-friendly soil water model that is coupled to plant growth. Since constant values for ϕgas_min in plant and hydrological modeling appeared to be inappropriate, an integrated approach, including both physiological and physical processes, should be used instead. Therefore, we advocate using our method in all situations where oxygen stress could occur.

Biological Remediation of Petroleum Contaminants

NASA Astrophysics Data System (ADS)

Kuhad, Ramesh Chander; Gupta, Rishi

Large volumes of hazardous wastes are generated in the form of oily sludges and contaminated soils during crude oil transportation and processing. Although many physical, chemical and biological treatment technologies are available for petroleum contaminants petroleum contaminants in soil, biological methods have been considered the most cost-effective. Practical biological remediation methods typically involve direct use of the microbes naturally occurring in the contaminated environment and/or cultured indigenous or modified microorganisms. Environmental and nutritional factors, including the properties of the soil, the chemical structure of the hydrocarbon(s), oxygen, water, nutrient availability, pH, temperature, and contaminant bioavailability, can significantly affect the rate and the extent of hydrocarbon biodegradation hydrocarbon biodegradation by microorganisms in contaminated soils. This chapter concisely discusses the major aspects of bioremediation of petroleum contaminants.

Oxygen-17 anomaly in soil nitrate: A new precipitation proxy for desert landscapes

NASA Astrophysics Data System (ADS)

Wang, Fan; Ge, Wensheng; Luo, Hao; Seo, Ji-Hye; Michalski, Greg

2016-03-01

The nitrogen cycle in desert soil ecosystems is particularly sensitive to changes in precipitation, even of relatively small magnitude and short duration, because it is already under water stress. This suggests that desert soils may have preserved past evidence of small variations in continental precipitation. We have measured nitrate (NO3-) concentrations in soils from the Atacama (Chile), Kumtag (China), Mojave (US), and Thar (India) deserts, and stable nitrogen and oxygen isotope (15N, 17O, and 18O) abundances of the soil NO3-. 17O anomalies (Δ17O), the deviations from the mass-independent isotopic fractionation, were detected in soil NO3- from almost all sites of these four deserts. There was a strong negative correlation between the mean annual precipitation (MAP) and soil NO3- Δ17O values (Δ

New Insights into How Increases in Fertility Improve the Growth of Rice at the Seedling Stage in Red Soil Regions of Subtropical China

PubMed Central

Li, Yilin; Shi, Weiming; Wang, Xingxiang

2014-01-01

The differences in rhizosphere nitrification activities between high- and low- fertility soils appear to be related to differences in dissolved oxygen concentrations in the soil, implying a relationship to differences in the radial oxygen loss (ROL) of rice roots in these soils. A miniaturised Clark-type oxygen microelectrode system was used to determine rice root ROL and the rhizosphere oxygen profile, and rhizosphere nitrification activity was studied using a short-term nitrification activity assay. Rice planting significantly altered the oxygen cycling in the water-soil system due to rice root ROL. Although the oxygen content in control high-fertility soil (without rice plants) was lower than that in control low-fertility soil, high rice root ROL significantly improved the rhizosphere oxygen concentration in the high-fertility soil. High soil fertility improved the rice root growth and root porosity as well as rice root ROL, resulting in enhanced rhizosphere nitrification. High fertility also increased the content of nitrification-induced nitrate in the rhizosphere, resulting in enhanced ammonium uptake and assimilation in the rice. Although high ammonium pools in the high-fertility soil increased rhizosphere nitrification, rice root ROL might also contribute to rhizosphere nitrification improvement. This study provides new insights into the reasons that an increase in soil fertility may enhance the growth of rice. Our results suggest that an amendment of the fertiliser used in nutrient- and nitrification-poor paddy soils in the red soil regions of China may significantly promote rice growth and rice N nutrition. PMID:25291182

Relative rates of nitric oxide and nitrous oxide production by nitrifiers, denitrifiers, and nitrate respirers

NASA Technical Reports Server (NTRS)

Anderson, I. C.; Levine, J. S.

1986-01-01

An account is given of the atmospheric chemical and photochemical effects of biogenic nitric and nitrous oxide emissions. The magnitude of the biogenic emission of NO is noted to remain uncertain. Possible soil sources of NO and N2O encompass nitrification by autotropic and heterotropic nitrifiers, denitrification by nitrifiers and denitrifiers, nitrate respiration by fermenters, and chemodenitrification. Oxygen availability is the primary determinant of these organisms' relative rates of activity. The characteristics of this major influence are presently investigated in light of the effect of oxygen partial pressure on NO and N2O production by a wide variety of common soil-nitrifying, denitrifying, and nitrate-respiring bacteria under laboratory conditions. The results obtained indicate that aerobic soils are primary sources only when there is sufficient moisture to furnish anaerobic microsites for denitrification.

Anticipating on amplifying water stress: Optimal crop production supported by anticipatory water management

NASA Astrophysics Data System (ADS)

Bartholomeus, Ruud; van den Eertwegh, Gé; Simons, Gijs

2015-04-01

Agricultural crop yields depend largely on the soil moisture conditions in the root zone. Drought but especially an excess of water in the root zone and herewith limited availability of soil oxygen reduces crop yield. With ongoing climate change, more prolonged dry periods alternate with more intensive rainfall events, which changes soil moisture dynamics. With unaltered water management practices, reduced crop yield due to both drought stress and waterlogging will increase. Therefore, both farmers and water management authorities need to be provided with opportunities to reduce risks of decreasing crop yields. In The Netherlands, agricultural production of crops represents a market exceeding 2 billion euros annually. Given the increased variability in meteorological conditions and the resulting larger variations in soil moisture contents, it is of large economic importance to provide farmers and water management authorities with tools to mitigate risks of reduced crop yield by anticipatory water management, both at field and at regional scale. We provide the development and the field application of a decision support system (DSS), which allows to optimize crop yield by timely anticipation on drought and waterlogging situations. By using this DSS, we will minimize plant water stress through automated drainage and irrigation management. In order to optimize soil moisture conditions for crop growth, the interacting processes in the soil-plant-atmosphere system need to be considered explicitly. Our study comprises both the set-up and application of the DSS on a pilot plot in The Netherlands, in order to evaluate its implementation into daily agricultural practice. The DSS focusses on anticipatory water management at the field scale, i.e. the unit scale of interest to a farmer. We combine parallel field measurements ('observe'), process-based model simulations ('predict'), and the novel Climate Adaptive Drainage (CAD) system ('adjust') to optimize soil moisture conditions. CAD is used both for controlled drainage practices and for sub-irrigation. The DSS has a core of the plot-scale SWAP model (soil-water-atmosphere-plant), extended with a process-based module for the simulation of oxygen stress for plant roots. This module involves macro-scale and micro-scale gas diffusion, as well as the plant physiological demand of oxygen, to simulate transpiration reduction due to limited oxygen availability. Continuous measurements of soil moisture content, groundwater level, and drainage level are used to calibrate the SWAP model each day. This leads to an optimal reproduction of the actual soil moisture conditions by data assimilation in the first step in the DSS process. During the next step, near-future (+10 days) soil moisture conditions and drought and oxygen stress are predicted using weather forecasts. Finally, optimal drainage levels to minimize stress are simulated, which can be established by CAD. Linkage to a grid-based hydrological simulation model (SPHY) facilitates studying the spatial dynamics of soil moisture and associated implications for management at the regional scale. Thus, by using local-scale measurements, process-based models and weather forecasts to anticipate on near-future conditions, not only field-scale water management but also regional surface water management can be optimized both in space and time.

Development and validation of an open source O2-sensitive gel for physiological profiling of soil microbial communities.

PubMed

McLamore, E S; Garland, J L; Mackowiak, C; Desaunay, A; Garland, N; Chaturvedi, P; Taguchi, M; Dreaden, K; Catechis, John; Ullman, J L

2014-01-01

Community level physiological profiling is a simple, high-throughput technique for assessing microbial community physiology. Initial methods relying on redox-dye based detection of respiration were subject to strong enrichment bias, but subsequent development of a microtiter assay using an oxygen-quenched dye reduced this bias and improved the versatility of the approach. Commercial production of the oxygen microplates recently stopped, which led to the present effort to develop and validate a system using a luminophore dye (platinum tetrakis pentafluorophenyl) immobilized at the bottom of wells within a 96 well microtiter plate. The technique was used to analyze three well-characterized Florida soils: oak saw palmetto scrub, coastal mixed hardwood, and soil from an agricultural field used to grow corn silage. Substrate induced respiration was monitored by measuring respiration rates in soils under basal conditions and comparing to soils supplemented with nitrogen and various carbon sources (mannose, casein, asparagine, coumaric acid). All data was compared to a previously available commercial assay. There were no significant differences in the maximum peak intensity or the time to peak response for all soils tested (p<0.001, α=0.05). The experimental assay plates can be reused on soils up to four times (based on a deviation of less than 5%), where the commercial assay should not be reused. The results indicate that the new oxygen-based bioassay is a cost effective, open source tool for functional profiling of microbial communities. Copyright © 2013 Elsevier B.V. All rights reserved.

Rapid determination of soil quality and earthworm impacts on soil microbial communities using fluorescence-based respirometry

NASA Astrophysics Data System (ADS)

Prendergast-Miller, Miranda T.; Thurston, Josh; Taylor, Joe; Helgason, Thorunn; Ashauer, Roman; Hodson, Mark E.

2017-04-01

We applied a fluorescence-based respirometry method currently devised for aquatic ecotoxicology studies to rapidly measure soil microbial oxygen consumption as a function of soil quality. In this study, soil was collected from an arable wheat field and the field margin. These two soil habitats are known to differ in their soil quality due to differences in their use and management as well as plant, microbial and earthworm community. The earthworm Lumbricus terrestris was incubated in arable or margin soil for three weeks. After this initial phase, a transfer experiment was then conducted to test the hypothesis that earthworm 'migration' alters soil microbial community function and diversity. In this transfer experiment, earthworms incubated in margin soil were transferred to arable soil. The converse transfer (i.e. earthworms incubated in arable soil) was also conducted. Soils of each type with no earthworms were also incubated as controls. After a further four week incubation, the impact of earthworm migration on the soil microbial community was tested by measuring oxygen consumption. Replicated soil slurry subsamples were aliquoted into individual respirometer wells (600 μl volume) on a glass 24-well microplate (Loligo Systems, Denmark) fitted with non-invasive, reusable oxygen sensor spots. The sealed microplate was then attached to an oxygen fluorescence sensor (SDR SensorDish Reader, PreSens, Germany). Oxygen consumption was measured in real-time over a 2 hr period following standard operating procedures. Soil microbial activity was measured with and without an added carbon source (glucose or cellulose, 50 mg C L-1). Using this system, we were able to differentiate between soil type, earthworm treatment and C source. Earthworm-driven impacts on soil microbial oxygen consumption were also supported by changes in soil microbial community structure and diversity revealed using DNA-based sequencing techniques. This method provides a simple and rapid system for measuring soil quality and has the potential for use in a variety of scenarios investigating impacts on soil microbial function.

Peat fires as source of polycyclic aromatic hydrocarbons in soils

NASA Astrophysics Data System (ADS)

Tsibart, Anna

2013-04-01

Polycyclic aromatic hydrocarbons (PAHs) arrive from pyrogenic sources including volcanism and the combustion of oil products and plant materials. The production of PAHs during the combustion of plant materials was considered in a number of publications, but their results were mainly obtained in laboratory experiments. Insufficient data are available on the hightemperature production of PAHs in environmental objects. For example, natural fires are frequently related to the PAH sources in landscapes, but very little factual data are available on this topic. On Polistovskii reserve (Russia, Pskov region) the soil series were separated depending on the damage to the plants; these series included soils of plots subjected to fires of different intensities, as well as soils of the background plots. The series of organic and organomineral soils significantly differed in their PAH distributions. In this series, the concentration of PAHs in the upper horizons of the peat soils little varied or slightly decreased, but their accumulation occurred at a depth of 5-10 or 10-20 cm in the soils after the fires. For example, in the series of high moor soils, the content of PAHs in the upper horizons remained almost constant; significant differences were observed in the subsurface horizons: from 2 ng/g in the background soil to 70 ng/g after the fire. In the upper horizons of the oligotrophic peat soils under pine forests, the total PAH content also varied only slightly. At the same time, the content of PAHs in the soil series increased from 15 to 90 ng/g with the increasing pyrogenic damage to the plot. No clear trends of the PAH accumulation were recorded in the organomineral soils. The content of PAHs in the soddy-podzolic soil subjected to fire slightly decreased (from 20 to 10 ng/g) compared to the less damaged soil. In peat fires, the access of oxygen to the fire zone is lower than in forest fires. The oxygen deficit acts as a factor of the organic fragments recombination and PAH production; therefore, larger amounts of PAHs are formed in peat fires. In addition, the peat fires occur directly in the soil layer; therefore, larger amounts of the resulting polyarenes remain in the soils of the fire sites. PAHs also can be formed at the heating of organic matter on the areas adjacent to the fire sites. After the combustion of peat in fires, phenanthrene, chrysene, benz[a]pyrene, and tetraphene accumulate in soils. This is mainly the group of 4-nuclear compounds with the participation of 3-nuclear phenanthrene and 5-nuclear benz[a]pyrene. The formation of high-molecular weight compounds like benz[a]pyrene and, in some places, benzo[ghi]perylene is possible during smoldering under a low oxygen supply.

Phosphorous bioavailability along a soil chronosequence

NASA Astrophysics Data System (ADS)

Roberts, K.; Vokhshoori, N. L.; Rosenthanl, A.; Turner, B. L.; Condron, L.; Paytan, A.

2011-12-01

In humid environments, as soils age nutrient loss through leaching and chemical trasformations affect the succession and composition of the biological communities. In particular phosphorus (P), often a limiting nutrient in terrestrial systems, tends to evolve into less bio-available forms over time, compounding loss through leaching. Thus P availability has the potential to strongly affect community productivity and structure. Low standing stock of P may not necessarily imply P limitation as the bio-available P pool is continuously recycled and re-utilized. Thus extensive recycling can reduce to varying extents the effect of P limitation. The bio-availability and recycling rates of P are difficult to measure; multiple sequential extraction processes have been developed to try to define and quantify the bio-availability of both inorganic and organic forms of P. In this preliminary study, we will present results of P concentrations in different soil fractions and oxygen isotopes in phosphate. These data together increase our understanding of P dynamics as soils age. The work is being done with a well characterized and dated chronosequence from the west coast of the South Island of New Zealand near the Haast River.

Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Angle, Jordan C.; Morin, Timothy H.; Solden, Lindsey M.

The current paradigm, widely incorporated in soil biogeochemical models, is that microbial methanogenesis can only occur in anoxic habitats. In contrast, here we show clear geochemical and biological evidence for methane production in well-oxygenated soils of a freshwater wetland. A comparison of oxic to anoxic soils reveal up to ten times greater methane production and nine times more methanogenesis activity in oxygenated soils. Metagenomic and metatranscriptomic sequencing recover the first near-complete genomes for a novel methanogen species, and show acetoclastic production from this organism was the dominant methanogenesis pathway in oxygenated soils. This organism, Candidatus Methanothrix paradoxum, is prevalent acrossmore » methane emitting ecosystems, suggesting a global significance. Moreover, in this wetland, we estimate that up to 80% of methane fluxes could be attributed to methanogenesis in oxygenated soils. Together, our findings challenge a widely held assumption about methanogenesis, with significant ramifications for global methane estimates and Earth system modeling.« less

Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Angle, Jordan C.; Morin, Timothy H.; Solden, Lindsey M.

The current paradigm, widely incorporated in soil biogeochemical models, is that microbial methanogenesis can only occur in anoxic habitats1-4. In contrast, here porewater and greenhouse-gas flux measurements show clear evidence for methane production in well-oxygenated soils from a freshwater wetland. A comparison of oxic to anoxic soils revealed up to ten times greater methane production and nine times more methanogenesis activity in oxygenated soils. Metagenomic and metatranscriptomic sequencing recovered the first near complete genomes for a novel methanogen species, and showed acetoclastic production from this organism was the dominant methanogenesis pathway in oxygenated soils. This organism, Candidatus Methanosaeta oxydurans, ismore » prevalent across methane emitting ecosystems, suggesting a global significance. Moreover, in this wetland, we estimated that a dominant fraction of methane fluxes could be attributed to methanogenesis in oxygenated soils. Together our findings challenge a widely-held assumption about methanogenesis, with significant ramifications for global methane estimates and Earth system modeling.« less

Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions

DOE PAGES

Angle, Jordan C.; Morin, Timothy H.; Solden, Lindsey M.; ...

2017-11-16

The current paradigm, widely incorporated in soil biogeochemical models, is that microbial methanogenesis can only occur in anoxic habitats. In contrast, here we show clear geochemical and biological evidence for methane production in well-oxygenated soils of a freshwater wetland. A comparison of oxic to anoxic soils reveal up to ten times greater methane production and nine times more methanogenesis activity in oxygenated soils. Metagenomic and metatranscriptomic sequencing recover the first near-complete genomes for a novel methanogen species, and show acetoclastic production from this organism was the dominant methanogenesis pathway in oxygenated soils. This organism, Candidatus Methanothrix paradoxum, is prevalent acrossmore » methane emitting ecosystems, suggesting a global significance. Moreover, in this wetland, we estimate that up to 80% of methane fluxes could be attributed to methanogenesis in oxygenated soils. Together, our findings challenge a widely held assumption about methanogenesis, with significant ramifications for global methane estimates and Earth system modeling.« less

Assessing and monitoring soil quality at agricultural waste disposal areas-Soil Indicators

NASA Astrophysics Data System (ADS)

Doula, Maria; Kavvadias, Victor; Sarris, Apostolos; Lolos, Polykarpos; Liakopoulou, Nektaria; Hliaoutakis, Aggelos; Kydonakis, Aris

2014-05-01

The necessity of elaborating indicators is one of the priorities identified by the United Nations Convention to Combat Desertification (UNCCD). The establishment of an indicator monitoring system for environmental purposes is dependent on the geographical scale. Some indicators such as rain seasonality or drainage density are useful over large areas, but others such as soil depth, vegetation cover type, and land ownership are only applicable locally. In order to practically enhance the sustainability of land management, research on using indicators for assessing land degradation risk must initially focus at local level because management decisions by individual land users are taken at this level. Soils that accept wastes disposal, apart from progressive degradation, may cause serious problems to the surrounding environment (humans, animals, plants, water systems, etc.), and thus, soil quality should be necessarily monitored. Therefore, quality indicators, representative of the specific waste type, should be established and monitored periodically. Since waste composition is dependent on their origin, specific indicators for each waste type should be established. Considering agricultural wastes, such a specification, however, could be difficult, since almost all agricultural wastes are characterized by increased concentrations of the same elements, namely, phosphorous, nitrogen, potassium, sulfur, etc.; contain large amounts of organic matter; and have very high values of chemical oxygen demand (COD), biochemical oxygen demand (BOD), and electrical conductivity. Two LIFE projects, namely AgroStrat and PROSODOL are focused on the identification of soil indicators for the assessment of soil quality at areas where pistachio wastes and olive mill wastes are disposed, respectively. Many soil samples were collected periodically for 2 years during PROSODOL and one year during AgroStrat (this project is in progress) from waste disposal areas and analyzed for 23 parameters. Results indicate that there are soil parameters that can be used as indictors to assess soil quality at such areas. For the two cases, i.e pistachio wastes and olive oil mill wastes, different soil parameters were identified as potential indicators. In specific, for OMW the proposed indicators are: organic matter, electrical conductivity, total N, total polyphenols, exchangeable K, DTPA-available Fe, available P and pH (for the cases of acid soils). For pistachio wastes, it seems that the most appropriate indictors are: organic matter, electrical conductivity, exchangeable Mg, DTPA-available Fe, DTPA-available Cu, available B. A monitoring system was developed which may assist authorities and policy makers to continuously monitor the disposal areas or areas where wastes are used for fertilization/irrigation. For this, soil parameters were mapped with respect to the depth, date and temporal variations of their spatial distribution (spatial surfaces). Interpolated surfaces based on the Inverse Distance Weighted method (IDW) were created and integrated within a geospatial web based map application tool.

Response of Microbial Soil Carbon Mineralization Rates to Oxygen Limitations

NASA Astrophysics Data System (ADS)

Keiluweit, M.; Denney, A.; Nico, P. S.; Fendorf, S. E.

2014-12-01

The rate of soil organic matter (SOM) mineralization is known to be controlled by climatic factors as well as molecular structure, mineral-organic associations, and physical protection. What remains elusive is to what extent oxygen (O2) limitations impact overall rates of microbial SOM mineralization (oxidation) in soils. Even within upland soils that are aerobic in bulk, factors limiting O2 diffusion such as texture and soil moisture can result in an abundance of anaerobic microsites in the interior of soil aggregates. Variation in ensuing anaerobic respiration pathways can further impact SOM mineralization rates. Using a combination of (first) aggregate model systems and (second) manipulations of intact field samples, we show how limitations on diffusion and carbon bioavailability interact to impose anaerobic conditions and associated respiration constraints on SOM mineralization rates. In model aggregates, we examined how particle size (soil texture) and amount of dissolved organic carbon (bioavailable carbon) affect O2 availability and distribution. Monitoring electron acceptor profiles (O2, NO3-, Mn and Fe) and SOM transformations (dissolved, particulate, mineral-associated pools) across the resulting redox gradients, we then determined the distribution of operative microbial metabolisms and their cumulative impact on SOM mineralization rates. Our results show that anaerobic conditions decrease SOM mineralization rates overall, but those are partially offset by the concurrent increases in SOM bioavailability due to transformations of protective mineral phases. In intact soil aggregates collected from soils varying in texture and SOM content, we mapped the spatial distribution of anaerobic microsites. Optode imaging, microsensor profiling and 3D tomography revealed that soil texture regulates overall O2 availability in aggregate interiors, while particulate SOM in biopores appears to control the fine-scale distribution of anaerobic microsites. Collectively, our results suggest that texture and particulate organic matter content are useful predictors for the impact of O2 limitations on SOM mineralization rates.

Soil Oxidation-Reduction in Wetlands and Its Impact on Plant Functioning

PubMed Central

Pezeshki, S. R.; DeLaune, R. D.

2012-01-01

Soil flooding in wetlands is accompanied by changes in soil physical and chemical characteristics. These changes include the lowering of soil redox potential (Eh) leading to increasing demand for oxygen within the soil profile as well as production of soil phytotoxins that are by-products of soil reduction and thus, imposing potentially severe stress on plant roots. Various methods are utilized for quantifying plant responses to reducing soil conditions that include measurement of radial oxygen transport, plant enzymatic responses, and assessment of anatomical/morphological changes. However, the chemical properties and reducing nature of soil environment in which plant roots are grown, including oxygen demand, and other associated processes that occur in wetland soils, pose a challenge to evaluation and comparison of plant responses that are reported in the literature. This review emphasizes soil-plant interactions in wetlands, drawing attention to the importance of quantifying the intensity and capacity of soil reduction for proper evaluation of wetland plant responses, particularly at the process and whole-plant levels. Furthermore, while root oxygen-deficiency may partially account for plant stress responses, the importance of soil phytotoxins, produced as by-products of low soil Eh conditions, is discussed and the need for development of methods to allow differentiation of plant responses to reduced or anaerobic soil conditions vs. soil phytotoxins is emphasized. PMID:24832223

Biological Oxygen Demand in Soils and Litters

NASA Astrophysics Data System (ADS)

Smagin, A. V.; Smagina, M. V.; Sadovnikova, N. B.

2018-03-01

Biological oxygen demand (BOD) in mineral and organic horizons of soddy-podzolic soils in the forest-park belt of Moscow as an indicator of their microbial respiration and potential biodestruction function has been studied. The BOD of soil samples has been estimated with a portable electrochemical analyzer after incubation in closed flasks under optimum hydrothermal conditions. A universal gradation scale of this parameter from very low (<2 g O2/(m3 h)) to extremely high (>140 g O2/(m3 h)) has been proposed for mineral and organic horizons of soil. A physically substantiated model has been developed for the vertical distribution of BOD in the soil, which combines the diffusion transport of oxygen from the atmosphere and its biogenic uptake in the soil by the first-order reaction. An analytical solution of the model in the stationary state has been obtained; from it, the soil oxygen diffusivity and the kinetic constants of O2 uptake have been estimated, and the profile-integrated total BOD value has been calculated (0.4-1.8 g O2/(m2 h)), which is theoretically identical to the potential oxygen flux from the soil surface due to soil respiration. All model parameters reflect the recreation load on the soil cover by the decrease in their values against the control.

Impact of abiotic factors on development of the community of arbuscular mycorrhizal fungi in the soil: a Review

NASA Astrophysics Data System (ADS)

Jamiołkowska, Agnieszka; Księżniak, Andrzej; Gałązka, Anna; Hetman, Beata; Kopacki, Marek; Skwaryło-Bednarz, Barbara

2018-01-01

Arbuscular mycorrhizal fungi inhabiting soil play an important role for vascular plants. Interaction between arbuscular mycorrhizal fungi, plants and soil microorganisms leads to many mutual advantages. However, the effectiveness of mycorrhizal fungi depends not only on biotic, but also abiotic factors such as physico-chemical properties of the soil, availability of water and biogenic elements, agricultural practices, and climatic conditions. First of all, it is important to adapt the arbuscular mycorrhizal fungi species to changing environmental conditions. The compactness of the soil and its structure have a huge impact on its biological activity. Soil pH reaction has a substantial impact on the mobility of ions in soil dilutions and their uptake by plants and soil microflora. Water excess can be a factor negatively affecting arbuscular mycorrhizal fungi because these microorganisms are sensitive to a lower availability of oxygen. Mechanical cultivation of the soil has a marginal impact on the arbuscular mycorrhizal fungi spores. However, soil translocation can cause changes to the population of the arbuscular mycorrhizal fungi abundance in the soil profile. The geographical location and topographic differentiation of cultivated soils, as well as the variability of climatic factors affect the population of the arbuscular mycorrhizal fungi in the soils and their symbiotic activity.

Elemental Analysis of the JSC Mars-1 Soil Simulant using Laser Ablation and Magnetic Separation

NASA Technical Reports Server (NTRS)

Nasab, Ahab S.

2005-01-01

Future long-duration missions to Mars require capabilities in terms of manufacture of structures and chemical compounds essential for human habitat and exploratory activities. Currently, it is not feasible to import all the required raw and finished materials from Earth. In fact, essential items such as structural members as well as various gases for human consumption and material processing need to be largely extracted from the available planetary resources. The resources on Mars include its soil and rocks, its atmosphere and the polar caps. Mars atmosphere consists of 95% carbon dioxide and the balance contains small percentages of oxygen, nitrogen, and argon. The Mars regolith contains many metal oxides in various mineralogical forms. Presently, Martian soil samples are not available. However, a closely matched Martian soil simulant developed by the Johnson Space Center has been available for scientific research and engineering studies. The chemical makeup of this simulant is compared with the data from Viking Lander and Path Finder missions are shown..

Interaction of oxygen concentration and retention of pollutants in vertical flow constructed wetlands for CSO treatment.

PubMed

Woźniak, R; Dittmer, U; Welker, A

2007-01-01

The EU Water Framework Directive (WFD) calls for a good quality of all water bodies. Retention soil filters (RSF) have been developed to treat discharges from combined sewers systems. RSF have proved over the past 15 years to be the most effective measure to meet the EU WFD standards, especially for small or particularly sensitive receiving waters, which require an enhanced reduction of emissions from combined sewer overflows (CSOs). The paper presents results from laboratory-scale experiments, in which the oxygen measurement in the filter plays a main role. The results show remarkable differences in oxygen concentrations in different filter depths. The highest oxygen consumption takes place in the upper part of the filter. In the lower part the re-aeration of sewage from the soil air dominates. This indicates that the biological activity is limited to the upper part of the filter. The availability of oxygen in the filter is a sign for degradation of wastewater compounds (ammonium, COD) under certain conditions and already takes place during the filter operation. The removal of ammonium especially cannot be strictly divided into phases of sorption during the loading and oxidation during the dry period any more.

Influence of Watershed Characteristics on Wetland Hydrology (Tampa, FL)

EPA Science Inventory

The availability of oxygen in wetland soils is a major driver of rate changes for several important ecological functions (e.g. nutrient processing, carbon sequestration) that the Tampa Bay Ecosystem Services Research Program (TB-ESRP) is quantifying to estimate ecosystem services...

Radon as a natural tracer for gas transport within uranium waste rock piles.

PubMed

Silva, N C; Chagas, E G L; Abreu, C B; Dias, D C S; Lopez, D; Guerreiro, E T Z; Alberti, H L C; Braz, M L; Branco, O; Fleming, P

2014-07-01

Acid mine drainage (AMD) has been identified as the main cause for outflow of acid water and radioactive/non-radioactive contaminants. AMD encompasses pyrites oxidation when water and oxygen are available. AMD was identified in uranium waste rock piles (WRPs) of Indústrias Nucleares do Brasil-Caldas facility (Brazilian uranium mine), resulting in high costs for water treatment. AMD reduction is the main challenge, and scientific investigation has been conducted to understand oxygen and water transportation within WRPs, where 222Rn is used as natural tracer for oxygen transportation. The study consists of soil radon gas mapping in the top layer of WRP4 using active soil gas pumping, radon adsorption in active charcoal and 222Rn determination using high-resolution gamma-ray spectrometry. A sampling network of 71 points was built where samples were collected at a depth of 40 cm. Soil radon gas concentration ranged from 33.7 to 1484.2 kBq m(-3) with mean concentration of 320.7±263.3 kBq m(-3). © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Non-destructive measurement of carbonic anhydrase activity and the oxygen isotope composition of soil water

NASA Astrophysics Data System (ADS)

Jones, Sam; Sauze, Joana; Ogée, Jérôme; Wohl, Steven; Bosc, Alexandre; Wingate, Lisa

2016-04-01

Carbonic anhydrases are a group of metalloenzymes that catalyse the hydration of aqueous carbon dioxide (CO2). The expression of carbonic anhydrase by bacteria, archaea and eukarya has been linked to a variety of important biological processes including pH regulation, substrate supply and biomineralisation. As oxygen isotopes are exchanged between CO2 and water during hydration, the presence of carbonic anhydrase in plants and soil organisms also influences the oxygen isotope budget of atmospheric CO2. Leaf and soil water pools have distinct oxygen isotope compositions, owing to differences in pool sizes and evaporation rates, which are imparted on CO2during hydration. These differences in the isotopic signature of CO2 interacting with leaves and soil can be used to partition the contribution of photosynthesis and soil respiration to net terrestrial CO2 exchange. However, this relies on our knowledge of soil carbonic anhydrase activity and currently, the prevalence and function of these enzymes in soils is poorly understood. Isotopic approaches used to estimate soil carbonic anhydrase activity typically involve the inversion of models describing the oxygen isotope composition of CO2 fluxes to solve for the apparent, potentially catalysed, rate of oxygen exchange during hydration. This requires information about the composition of CO2 in isotopic equilibrium with soil water obtained from destructive, depth-resolved soil water sampling. This can represent a significant challenge in data collection given the considerable potential for spatial and temporal variability in the isotopic composition of soil water and limited a priori information with respect to the appropriate sampling resolution and depth. We investigated whether we could circumvent this requirement by constraining carbonic anhydrase activity and the composition of soil water in isotopic equilibrium with CO2 by solving simultaneously the mass balance for two soil CO2 steady states differing only in the oxygen isotope composition of ambient CO2. This non-destructive approach was tested through laboratory incubations of air-dried soils that were re-wetted with water of known isotopic composition. Performance was assessed by comparing estimates of the soil water oxygen isotope composition derived from open chamber flux measurements with those measured in the irrigation water and soil water extracted following incubations. The influence of soil pH and bovine carbonic anhydrase additions on these estimates was also investigated. Coherent values were found between the soil water composition estimates obtained from the dual steady state approach and those measured for irrigation waters. Estimates of carbonic anhydrase activity made using this approach also reflected well artificial increases to the concentration of carbonic anhydrase and indicated that this activity was sensitive to soil pH.

Soil Aeration and Tree Health: Correlating Soil Oxygen Measurements with the Decline of Established Oaks

Treesearch

L. R. Costello; J. D. MacDonald; K. A. Jacobs

1991-01-01

Field measurements of oxygen concentration and oxygen diffusion rate (ODR) indicate that ODR is a more reliable indicator of problem sites. In a landscaped area where oak trees are declining, ODR in the upper part of the soil profile ranged between 0.1-0.2 µg O2cm2/minute (where µg = micrograms, and O...

POLYCYCLIC AROMATIC HYDROCARBON BIODEGRADATION AS A FUNCTION OF OXYGEN TENSION IN CONTAMINATED SOIL

EPA Science Inventory

Laboratory tests were conducted to determine the effect of soil gas oxygen concentration on the degradation and mineralization of spiked 14C-pyrene and nonspiked 16 priority pollutant polycyclic aromatic hydrocarbons (PAH) present in the soil. The soil used for the evaluation was...

Ammonia oxidation pathways and nitrifier denitrification are significant sources of N2O and NO under low oxygen availability

PubMed Central

Zhu, Xia; Burger, Martin; Doane, Timothy A.; Horwath, William R.

2013-01-01

The continuous increase of nitrous oxide (N2O) abundance in the atmosphere is a global concern. Multiple pathways of N2O production occur in soil, but their significance and dependence on oxygen (O2) availability and nitrogen (N) fertilizer source are poorly understood. We examined N2O and nitric oxide (NO) production under 21%, 3%, 1%, 0.5%, and 0% (vol/vol) O2 concentrations following urea or ammonium sulfate [(NH4)2SO4] additions in loam, clay loam, and sandy loam soils that also contained ample nitrate. The contribution of the ammonia (NH3) oxidation pathways (nitrifier nitrification, nitrifier denitrification, and nitrification-coupled denitrification) and heterotrophic denitrification (HD) to N2O production was determined in 36-h incubations in microcosms by 15N-18O isotope and NH3 oxidation inhibition (by 0.01% acetylene) methods. Nitrous oxide and NO production via NH3 oxidation pathways increased as O2 concentrations decreased from 21% to 0.5%. At low (0.5% and 3%) O2 concentrations, nitrifier denitrification contributed between 34% and 66%, and HD between 34% and 50% of total N2O production. Heterotrophic denitrification was responsible for all N2O production at 0% O2. Nitrifier denitrification was the main source of N2O production from ammonical fertilizer under low O2 concentrations with urea producing more N2O than (NH4)2SO4 additions. These findings challenge established thought attributing N2O emissions from soils with high water content to HD due to presumably low O2 availability. Our results imply that management practices that increase soil aeration, e.g., reducing compaction and enhancing soil structure, together with careful selection of fertilizer sources and/or nitrification inhibitors, could decrease N2O production in agricultural soils. PMID:23576736

Ammonia oxidation pathways and nitrifier denitrification are significant sources of N2O and NO under low oxygen availability.

PubMed

Zhu, Xia; Burger, Martin; Doane, Timothy A; Horwath, William R

2013-04-16

The continuous increase of nitrous oxide (N2O) abundance in the atmosphere is a global concern. Multiple pathways of N2O production occur in soil, but their significance and dependence on oxygen (O2) availability and nitrogen (N) fertilizer source are poorly understood. We examined N2O and nitric oxide (NO) production under 21%, 3%, 1%, 0.5%, and 0% (vol/vol) O2 concentrations following urea or ammonium sulfate [(NH4)2SO4] additions in loam, clay loam, and sandy loam soils that also contained ample nitrate. The contribution of the ammonia (NH3) oxidation pathways (nitrifier nitrification, nitrifier denitrification, and nitrification-coupled denitrification) and heterotrophic denitrification (HD) to N2O production was determined in 36-h incubations in microcosms by (15)N-(18)O isotope and NH3 oxidation inhibition (by 0.01% acetylene) methods. Nitrous oxide and NO production via NH3 oxidation pathways increased as O2 concentrations decreased from 21% to 0.5%. At low (0.5% and 3%) O2 concentrations, nitrifier denitrification contributed between 34% and 66%, and HD between 34% and 50% of total N2O production. Heterotrophic denitrification was responsible for all N2O production at 0% O2. Nitrifier denitrification was the main source of N2O production from ammonical fertilizer under low O2 concentrations with urea producing more N2O than (NH4)2SO4 additions. These findings challenge established thought attributing N2O emissions from soils with high water content to HD due to presumably low O2 availability. Our results imply that management practices that increase soil aeration, e.g., reducing compaction and enhancing soil structure, together with careful selection of fertilizer sources and/or nitrification inhibitors, could decrease N2O production in agricultural soils.

Processes controlling soil P amounts and availability along a weathering gradient

NASA Astrophysics Data System (ADS)

Helfenstein, Julian; Tamburini, Federica; von Sperber, Christian; Massey, Michael; Pistocchi, Chiara; Chadwick, Oliver; Vitousek, Peter; Frossard, Emmanuel

2017-04-01

In 1976 Walker and Syers presented a model describing the development of P pools with increasing weathering status of a soil (Walker and Syers 1976). This model has been repeatedly confirmed along gradients of different soil ages as well as gradients of different climatic conditions (Crews et al. 1995, Tamburini et al. 2012, Roberts et al. 2015, Feng et al. 2016). However, limited information is available on the processes controlling P amounts and availability along a weathering gradient. We used isotopic (33P, 18O), spectroscopic (P K-edge XANES), and other (enzymatic activity, chemical P speciation) methods to reveal drivers of P dynamics along the 150'000-year-old Kohala lava flow on Hawai'i, which stretches from 250 mm to over 3000 of mean annual precipitation. Chemical extractions and X-ray absorption spectroscopy show the gradual disappearance of apatite in favor of Fe- and Al-sorbed P species as well as organic P. We then distinguish two different types of processes: 1) processes determining the total amount of P in the topsoil, and 2) processes determining P availability. While weathering of apatite and eolian erosion control P amounts on less weathered and arid soils, leaching and biological uplift become increasingly important with increasing soil weathering status. On very weathered sites, leaching becomes the dominant process controlling P amounts, though it is partially counteracted by biological uptake and atmospheric dust deposition. In terms of P availability, dissolution of mineral P adds to the available P pool up to the intermediate range. Activity of acid phosphatase suggests that mineralization becomes increasingly important with higher weathering of soils. Despite this, P availability decreases drastically, as a result of continued loss of highly-mobile P through immobilization by biomass, increased P-sorption capacity by soils, and leaching. Crews, T. E., K. Kitayama, J. H. Fownes, R. H. Riley, A. Darrell, D. Mueller-dombois, and P. M. Vitousek. 1995. Changes in Soil Phosphorus Fractions and Ecosystem Dynamics across a Long Chronosequence in Hawaii. Ecology 76:1407-1424. Feng, J., B. L. Turner, X. Lü, Z. Chen, K. Wei, J. Tian, C. Wang, W. Luo, and L. Chen. 2016. Phosphorus transformations along a large-scale climosequence in arid and semiarid grasslands of northern China. Global Biogeochemical Cycles 30. Roberts, K., D. Defforey, B. L. Turner, L. M. Condron, S. Peek, S. Silva, C. Kendall, and A. Paytan. 2015. Oxygen isotopes of phosphate and soil phosphorus cycling across a 6500 year chronosequence under lowland temperate rainforest. Geoderma 257-258:14-21. Tamburini, F., V. Pfahler, E. K. Bünemann, K. Guelland, S. M. Bernasconi, and E. Frossard. 2012. Oxygen isotopes unravel the role of microorganisms in phosphate cycling in soils. Environmental Science and Technology 46:5956-5962. Walker, T. W., and J. K. Syers. 1976. The fate of phosphorus during pedogenesis. Geoderma 15:1-19.

Field observation of diurnal dissolved oxygen fluctuations in shallow groundwater.

PubMed

Schilling, Keith E; Jacobson, Peter

2015-01-01

Dissolved oxygen (DO) concentrations influence many biogeochemical processes in groundwater systems but studies of temporal variability in DO are lacking. In this study, we used an optical DO probe to measure rapid changes in concentration due to plant-groundwater interaction at an alluvial aquifer field site in Iowa. Diurnal DO concentrations were observed during mid- to late-summer when soil conditions were dry, fluctuating approximately 0.2 to 0.3 mg/L on a daily basis. DO fluctuations in groundwater were out-of-phase with diurnal water table fluctuations, increasing during the day and decreasing at night. DO consumption at night is likely due to increased soil autotrophic and heterotrophic respiration linked with patterns of carbon supply derived from daytime photosynthetic activity, and consistent with available literature on diurnal soil respiration patterns. Although more work is needed to quantify specific processes, our results indicate the potential usefulness of the new optical DO technology to reveal insights regarding many ecohydrological processes. © 2014, National Ground Water Association.

Phosphorus cycling in forest ecosystems: insights from oxygen isotopes in phosphate

NASA Astrophysics Data System (ADS)

Pistocchi, Chiara; Tamburini, Federica; Bünemann, Else; Frossard, Emmanuel

2015-04-01

The current view on the phosphorus (P) cycle in forest ecosystems relies mostly on measurements and correlations of pools, and to a lower extent on measurement of fluxes. We have no direct insight into the processes phosphate goes through at the ecosystem level, and into the relative importance of organic and mineral pools in sustaining P nutrition of trees. The analysis of oxygen isotopes associated to P (18Op) is expected to bring this type of information. The German Priority Program SPP 1685 aims to test the overall hypothesis that the P-depletion of soils drives forest ecosystems from P acquiring systems (efficient mobilization of P from the mineral phase) to P recycling systems (highly efficient cycling of P). Our contribution to this project will consist in studying the relative importance of biological and geochemical processes in controlling the P cycle in temperate beech forest ecosystems in Germany along a gradient of decreasing soil P availability. We will follow the fate of phosphate from litter fall to the uptake of P by plants via P release by decomposition of organic matter or after release from P-containing minerals, by using a multi-isotope approach (O in water and phosphate plus 33P). To address our research question we will rely on measurements in experimental forest sites and on laboratory incubations of the organic layer or the mineral soil. We present here the first results issued from the 2014 sampling on three study sites, where we characterized the P pools in surface soil horizons by a sequential extraction (modified after Tiessen and Moir, 2007) and we analysed the 18Op of the resin extractable- and microbial-P fractions. Contrary to what was previously found (e.g. Tamburini et al. 2012) the isotopic composition of these fractions in most of the samples does not reflect the equilibrium value (as the result of the dominance of the pyrophosphatase activity on the other enzymatic processes, Blake et al. 2005). Depending on the P availability in the soil, deviations from the equilibrium are more or less pronounced. We hypothesized that the 18Op is the result of other processes such the mineralization of organic P by phosphatases. These first results of 18Op on forest soils are suggesting that isotopic equilibrium driven by biological cycling (pyrophosphatase) is not always overprinting other processes. In addition, together with information on P speciation/concentration, 18Op seems to provide direct insights on P cycling at the ecosystem level. Blake R.E., Neil J.R.O., Surkov A.V. (2005) Biogeochemical cycling of phosphorus: insights from oxygen isotope effects of phosphoenzymes. American Journal of Science 305: 596-620 Moir J.O., Tiessen H. Characterization of available P by sequential extraction. Soil Sampling and Methods of Analysis, Second Edition. Ed. by M.R. Carter and E.G. Gregorich CRC Press 2007 Tamburini F., Pfahler V, Bünemann E.K., Guelland K., Bernasconi S.M., Frossard E. (2012) Oxygen Isotopes Unravel the Role of Microorganisms in Phosphate Cycling in Soils. Environmental Science & Technology 46: 5956-5962

Process-based modelling of the methane balance in periglacial landscapes (JSBACH-methane)

NASA Astrophysics Data System (ADS)

Kaiser, Sonja; Göckede, Mathias; Castro-Morales, Karel; Knoblauch, Christian; Ekici, Altug; Kleinen, Thomas; Zubrzycki, Sebastian; Sachs, Torsten; Wille, Christian; Beer, Christian

2017-01-01

A detailed process-based methane module for a global land surface scheme has been developed which is general enough to be applied in permafrost regions as well as wetlands outside permafrost areas. Methane production, oxidation and transport by ebullition, diffusion and plants are represented. In this model, oxygen has been explicitly incorporated into diffusion, transport by plants and two oxidation processes, of which one uses soil oxygen, while the other uses oxygen that is available via roots. Permafrost and wetland soils show special behaviour, such as variable soil pore space due to freezing and thawing or water table depths due to changing soil water content. This has been integrated directly into the methane-related processes. A detailed application at the Samoylov polygonal tundra site, Lena River Delta, Russia, is used for evaluation purposes. The application at Samoylov also shows differences in the importance of the several transport processes and in the methane dynamics under varying soil moisture, ice and temperature conditions during different seasons and on different microsites. These microsites are the elevated moist polygonal rim and the depressed wet polygonal centre. The evaluation shows sufficiently good agreement with field observations despite the fact that the module has not been specifically calibrated to these data. This methane module is designed such that the advanced land surface scheme is able to model recent and future methane fluxes from periglacial landscapes across scales. In addition, the methane contribution to carbon cycle-climate feedback mechanisms can be quantified when running coupled to an atmospheric model.

DOE Office of Scientific and Technical Information (OSTI.GOV)

McNicol, Gavin

Wetlands cover only a small fraction of the Earth’s land surface, but have a disproportionately large influence on global climate. Low oxygen conditions in wetland soils slows down decomposition, leading to net carbon dioxide sequestration over long timescales, while also favoring the production of redox sensitive gases such as nitrous oxide and methane. Freshwater marshes in particular sustain large exchanges of greenhouse gases under temperate or tropical climates and favorable nutrient regimes, yet have rarely been studied, leading to poor constraints on the magnitude of marsh gas sources, and the biogeochemical drivers of flux variability. The Sacramento-San Joaquin Delta inmore » California was once a great expanse of tidal and freshwater marshes but underwent drainage for agriculture during the last two centuries. The resulting landscape is unsustainable with extreme rates of land subsidence and oxidation of peat soils lowering the surface elevation of much of the Delta below sea level. Wetland restoration has been proposed as a means to slow further subsidence and rebuild peat however the balance of greenhouse gas exchange in these novel ecosystems is still poorly described. In this dissertation I first explore oxygen availability as a control on the composition and magnitude of greenhouse gas emissions from drained wetland soils. In two separate experiments I quantify both the temporal dynamics of greenhouse gas emission and the kinetic sensitivity of gas production to a wide range of oxygen concentrations. This work demonstrated the very high sensitivity of carbon dioxide, methane, and nitrous oxide production to oxygen availability, in carbon rich wetland soils. I also found the temporal dynamics of gas production to follow a sequence predicted by thermodynamics and observed spatially in other soil or sediment systems. In the latter part of my dissertation I conduct two field studies to quantify greenhouse gas exchange and understand the carbon sources for decomposition in a 1 km2 restored wetland in the Sacramento Delta. By coupling flux measurements at multiple-scales with remote sensing imagery I showed that large methane emissions produce an overall climate warming effect from the wetland for the next several centuries, despite relatively high productivity. I also used radiocarbon analyses of wetland sediment carbon dioxide and methane to show that both bulk peat and recently fixed carbon contribute to decomposition in the wetland, and that their relative importance is regulated by proximity to, and the phenological cycles of, emergent vegetation.« less

SOIL GAS OXYGEN TENSION AND PENTACHLOROPHENOL BIODEGRADATION

EPA Science Inventory

Laboratory tests were conducted to determine the effect of soil gas oxygen concentration on the degradation and mineralization of spiked 14C-pentachlorophenol and nonlabeled pentachlorophenol (PCP) present in soil taken from a prepared-bed land treatment unit at the Champion Inte...

Effects of oxygen supply on the biodegradation rate in oil hydrocarbons contaminated soil

NASA Astrophysics Data System (ADS)

Zawierucha, I.; Malina, G.

2011-04-01

Respirometry studies using the 10-chamber Micro-Oxymax respirometer (Columbus, Ohio) were conducted to determine the effect of biostimulation (by diverse ways of O2 supply) on enhancing biodegradation in soils contaminated with oil hydrocarbons. Soil was collected from a former military airport in Kluczewo, Poland. Oxygen was supplied by means of aerated water, aqueous solutions of H2O2 and KMnO4. The biodegradation was evaluated on the basis of O2 uptake and CO2 production. The O2 consumption and CO2 production rates during hydrocarbons biodegradation were estimated from the slopes of cumulative curve linear regressions. The pertinent intrinsic and enhanced biodegradation rates were calculated on the basis of mass balance equation and O2 uptake and CO2 production rates. The biodegradation rates of 5-7 times higher as compared to a control were observed when the aqueous solution of KMnO4 in concentration of 20 g L-1 was applied. Permanganate is known to readily oxidize alkene carbon - carbon double bonds; so it can be successfully applied in remediation technology for soils contaminated with oil hydrocarbons. While hydrocarbons are not completely mineralized by permanganate oxidation reactions, their structure is altered by polar functional groups providing vast improvements in aqueous solubility and availability for biodegradation. The 3% aqueous solution of H2O2 caused significant improvement of the biodegradation rates as compared to a control (on average about 260%). Aerobic biodegradation of hydrocarbons can benefit from the presence of oxygen released during H2O2 decomposition. Adding of aerated water resulted in an increase of biodegradation rates (about 114 - 229%) as compared to a control. The aerated water can both be the source of oxygen for microorganisms and determine the transport of substrate to bacteria cells.

Forest canopy structural properties. Chapter 14

Treesearch

Marie-Louise Smith; Jeanne Anderson; Matthew Fladeland

2008-01-01

The forest canopy is the interface between the land and the atmosphere, fixing atmospheric carbon into biomass and releasing oxygen and water. The arrangement of individual trees, differences in species morphology, the availability of light and soil nutrients, and many other factors determine canopy structure. Overviews of approaches for basic measurements of canopy...

Mixotrophy drives niche expansion of verrucomicrobial methanotrophs

PubMed Central

Carere, Carlo R; Hards, Kiel; Houghton, Karen M; Power, Jean F; McDonald, Ben; Collet, Christophe; Gapes, Daniel J; Sparling, Richard; Boyd, Eric S; Cook, Gregory M; Greening, Chris; Stott, Matthew B

2017-01-01

Aerobic methanotrophic bacteria have evolved a specialist lifestyle dependent on consumption of methane and other short-chain carbon compounds. However, their apparent substrate specialism runs contrary to the high relative abundance of these microorganisms in dynamic environments, where the availability of methane and oxygen fluctuates. In this work, we provide in situ and ex situ evidence that verrucomicrobial methanotrophs are mixotrophs. Verrucomicrobia-dominated soil communities from an acidic geothermal field in Rotokawa, New Zealand rapidly oxidised methane and hydrogen simultaneously. We isolated and characterised a verrucomicrobial strain from these soils, Methylacidiphilum sp. RTK17.1, and showed that it constitutively oxidises molecular hydrogen. Genomic analysis confirmed that this strain encoded two [NiFe]-hydrogenases (group 1d and 3b), and biochemical assays revealed that it used hydrogen as an electron donor for aerobic respiration and carbon fixation. While the strain could grow heterotrophically on methane or autotrophically on hydrogen, it grew optimally by combining these metabolic strategies. Hydrogen oxidation was particularly important for adaptation to methane and oxygen limitation. Complementary to recent findings of hydrogenotrophic growth by Methylacidiphilum fumariolicum SolV, our findings illustrate that verrucomicrobial methanotrophs have evolved to simultaneously utilise hydrogen and methane from geothermal sources to meet energy and carbon demands where nutrient flux is dynamic. This mixotrophic lifestyle is likely to have facilitated expansion of the niche space occupied by these microorganisms, allowing them to become dominant in geothermally influenced surface soils. Genes encoding putative oxygen-tolerant uptake [NiFe]-hydrogenases were identified in all publicly available methanotroph genomes, suggesting hydrogen oxidation is a general metabolic strategy in this guild. PMID:28777381

Oxygen from the lunar soil by molten silicate electrolysis

NASA Technical Reports Server (NTRS)

Colson, Russell O.; Haskin, Larry A.

1992-01-01

Accepting that oxygen, rather than gigantic gems or gold, is likely to make the Moon's Klondike, the extraction of oxygen from the lunar soil by molten silicate electrolysis has chosen to be investigated. Process theory and proposed lunar factory are addressed.

Nitrous oxide fluxes and soil oxygen dynamics of soil treated with cow urine

USDA-ARS?s Scientific Manuscript database

Ruminant urine deposition onto pastures creates hot-spots where emissions of nitrous oxide (N2O) are produced by aerobic and anaerobic microbial pathways. However, limited measurements of in situ soil oxygen (O2)-N2O relationships hinder the prediction of N2O emissions from urine-affected soil. This...

Microbial respiration and DOC composition in leachates from Holocene and Pleistocene soils from the Kolyma River basin in Eastern Siberia

NASA Astrophysics Data System (ADS)

Lewis, K.; Schade, J. D.; Sobczak, W. V.; Holmes, R. M.; Zimov, N.; Bulygina, E. B.; Chandra, S.; Bunn, A. G.; Russell-Roy, L.; Seybold, E. C.

2010-12-01

Permafrost is generally considered a long-term sink for carbon that remains locked away from the global carbon cycle. Anthropogenic climate change is likely to lead to thawing of permafrost and deepening of the soil active layer. Consequently, this carbon sink may become unlocked and available for bacterial decomposition, returning stored carbon to the active carbon cycle, with potentially severe consequences for atmospheric CO2 concentrations. The Kolyma watershed, in the Eastern Siberian Arctic, is underlain by continuous permafrost, often referred to as Yedoma, which provides a unique environment to study potential consequences of permafrost thaw for carbon dynamics in aquatic and terrestrial ecosystems. In order to predict the potential consequences of a major carbon input from thawing permafrost, we assessed the relative bioavailabilty of soil carbon by measuring rates of microbial consumption and changes in DOM composition in soil leachates. At two spatially distinct sample sites, soil was collected throughout the profile from the active layer and from permafrost, including soils from both Holocene and Pleistocene-era permafrost. To evaluate the rates of carbon processing and potential linkages to N and P cycles, we conducted a series of bottle experiments in which we measured biological oxygen demand as a proxy for carbon processing and assessed changes in the composition of dissolved organic carbon using spectral analyses. Experiments were conducted on leachate collected from each soil type. Each experiment included treatments in which leachates were enriched with nitrogen and phosphorus to determine whether carbon processing in soils was nutrient limited. We found substantial variation in oxygen consumption, with Yedoma soils generally exhibiting higher rates than Holocene soils, suggesting higher concentrations of labile carbon. We found no evidence of nutrient limitation of carbon processing in any soil leachates. Spectral slope analysis suggests that carbon processing increased the proportion of heavy aromatic carbon compounds in all but one soil type, suggesting that small molecular weight compounds are consumed first. The exception was the most active Yedoma soil, which showed the opposite effect, indicating an increase in the proportion of small molecules due to the presence of a different, and perhaps more digestible, form of carbon. These results suggest strong spatial variation in the amount and form of available carbon, as well as qualitative differences in the dynamics of carbon processing.

Microhabitat Effects on N2O Emissions from Floodplain Soils under Controlled Conditions

NASA Astrophysics Data System (ADS)

Ley, Martin; Lehmann, Moritz; Niklaus, Pascal; Frey, Beat; Kuhn, Thomas; Luster, Jörg

2015-04-01

Semi-terrestrial soils such as floodplain soils are considered to be potential hotspots of nitrous oxide (N2O) emissions. The quantitative assessment of N2O release from these hot spots under field conditions, and of the microbial pathways that underlie net N2O production (ammonium oxidation, nitrifier-denitrification, and denitrification) is challenging in the environment because of the high spatial and temporal variability. The production and consumption of N2O appears to be linked to the presence or absence of micro-niches, providing specific conditions that may be favorable to either of the microbial pathways that produce or consume N2O. The availability of oxygen, reactive organic carbon, and dissolved nitrogen substrates likely play key roles with regards to the net production of N2O. Previous field studies demonstrated, for example, that flooding can trigger "hot moments" of enhanced N2O emission through a close coupling of niches with high and low oxygen availabilities. Such microhabitat effects likely depend on soil aggregate formation, plant soil interactions in the rhizosphere and the degradation of organic matter accumulations. In order to assess how these factors can modulate N2O production and consumption under simulated flooding/drying conditions, we have set up a mesocosm experiment with model soils comprising various mixtures of N-rich floodplain soil aggregates (4000 - 250 µm representing large aggregates, or <250 µm representing small aggregates) and inert matrix material (glass beads of 150 - 250 µm size, or quartz sand of 2000 - 3200 µm size, respectively). Soils containing the different aggregate size groups were either planted with willow (Salix viminalis L.), mixed with leaf litter or left untreated. At several time points before, during and after a simulated flood event, we measure the net efflux rate of N2O. In addition, soil water content, redox potential as well as carbon and nitrogen substrate availability are monitored. In order to gain insight into the sources of, and biogeochemical controls on N2O production, we will measure the bulk isotopic signature of the produced N2O as well as its intramolecular 15N site preference. Changes in soil microbial communities, potentially controlling the balance between N2O production and consumption under different microhabitat conditions will be assessed using high-throughput DNA sequencing and q-PCR of key functional genes. Our study helps to increase our limited understanding of how microhabitats affect the occurrence of high N2O emissions from floodplain soils.

Towards a Better Understanding of the Oxygen Isotope Signature of Atmospheric CO2: Determining the 18O-Exchange Between CO2 and H2O in Leaves and Soil On-line with Laser-Based Spectroscopy

NASA Astrophysics Data System (ADS)

Gangi, L.; Rothfuss, Y.; Vereecken, H.; Brueggemann, N.

2013-12-01

The oxygen isotope signature of carbon dioxide (δ18O-CO2) is a powerful tool to disentangle CO2 fluxes in terrestrial ecosystems, as CO2 attains a contrasting 18O signature by the interaction with isotopically different soil and leaf water pools during soil respiration and photosynthesis, respectively. However, using the δ18O-CO2 signal to quantify plant-soil-atmosphere CO2 fluxes is still challenging due to a lack of knowledge concerning the magnitude and effect of individual fractionation processes during CO2 and H2O diffusion and during CO2-H2O isotopic exchange in soils and leaves, especially related to short-term changes in environmental conditions (non-steady state). This study addresses this research gap by combined on-line monitoring of the oxygen isotopic signature of CO2 and water vapor during gas exchange in soil and plant leaves with laser-based spectroscopy, using soil columns and plant chambers. In both experimental setups, the measured δ18O of water vapor was used to infer the δ18O of liquid water, and, together with the δ18O-CO2, the degree of oxygen isotopic equilibrium between the two species (θ). Gas exchange experiments with different functional plant types (C3 coniferous, C3 monocotyledonous, C3 dicotyledonous, C4) revealed that θ and the influence of the plant on the ambient δ18O-CO2 (CO18O-isoforcing) not only varied on a diurnal timescale but also when plants were exposed to limited water availability, elevated air temperature, and abrupt changes in light intensity (sunflecks). Maximum θ before treatments ranged between 0.7 and 0.8 for the C3 dicotyledonous (poplar) and C3 monocotyledonous (wheat) plants, and between 0.5 and 0.6 for the conifer (spruce) and C4 plant (maize) while maximum CO18O-isoforcing was highest in wheat (0.03 m s-1 ‰), similar in poplar and maize (0.02 m s-1 ‰), and lowest in spruce (0.01 m s-1 ‰). Multiple regression analysis showed that up to 97 % of temporal dynamics in CO18O-isoforcing could be explained by variations in stomatal conductance, θ, and δ18O of H2O at the evaporation site. The determined maximum in vivo activity of carbonic anhydrase, the enzyme which catalyzes the CO2-H2O oxygen isotope exchange inside leaves, varied between the different plant species and was, as observed for θ, higher in poplar and wheat, and lower in maize and spruce. Preliminary experiments with soil columns filled with sand demonstrated that gas-permeable microporous polypropylene tubing, which was installed at different depths in the soil columns, was appropriate for determining δ18O-H2O and δ18O-CO2 simultaneously without fractionation. Hence, this new methodology is promising for further studies on the oxygen isotopic exchange between CO2 and H2O in soils. Altogether, this study highlights that the δ18O-CO2 exchange in the soil-plant-atmosphere continuum is highly dynamic in response to short-term variations in environmental conditions, and emphasizes the need for an improved parameterization of models simulating δ18O-CO2.

Availability of hydrogen for lunar base activities

NASA Technical Reports Server (NTRS)

Bustin, Roberta

1990-01-01

Hydrogen will be needed on a lunar base to make water for consumables, to provide fuel, and to serve as reducing agent in the extraction of oxygen from lunar minerals. The abundance and distribution of solar wind implanted hydrogen were studied. Hydrogen was found in all samples studied with concentrations varying widely depending on soil maturity, grain size, and mineral composition. Seven cores returned from the moon were studied. Although hydrogen was implanted in the upper surface layer of the regolith, it was found throughout the cores due to micrometeorite reworking of the soil.

Factors affecting microbial 2,4,6-trinitrotoluene mineralization in contaminated soil

USGS Publications Warehouse

Bradley, P.M.; Chapelle, F.H.

1995-01-01

The influence of selected environmental factors on microbial TNT mineralization in soils collected from a TNT-contaminated site at Weldon Spring, MO, was examined using uniformly ring-labeled [14C]TNT. Microbial TNT mineralization was significantly inhibited by the addition of cellobiose and syringate. This response suggests that the indigenous microorganisms are capable of metabolizing TNT but preferentially utilize less recalcitrant substrates when available. The observed inhibition of TNT mineralization by TNT concentrations higher than 100 ??mol/kg of soil and by dry soil conditions suggests that toxic inhibition of microbial activity at high TNT concentrations and the periodic drying of these soils have contributed to the long-term persistence of TNT at Weldon Spring. In comparison to aerobic microcosms, mineralization was inhibited in anaerobic microcosms and in microcosms with a headspace of air amended with oxygen, suggesting that a mosaic of aerobic and anaerobic conditions may optimize TNT degradation at this site.

Electrokinetic remediation of inorganic and organic pollutants in textile effluent contaminated agricultural soil.

PubMed

Annamalai, Sivasankar; Santhanam, Manikandan; Sundaram, Maruthamuthu; Curras, Marta Pazos

2014-12-01

The discharge from the dyeing industries constitutes unfixed dyes, inorganic salts, heavy metal complexes etc., which spoil the surrounding areas of industrial sites. The present article reports the use of direct current electrokinetic technique for the treatment of textile contaminated soil. Impressed direct current voltage of 20 V facilitates the dye/metal ions movement in the naturally available dye contaminated soil towards the opposite electrode by electromigration. IrO2–RuO2–TiO2/Ti was used as anode and Ti used as cathode. UV–Visible spectrum reveals that higher dye intensity was nearer to the anode. Ni, Cr and Pb migration towards the cathode and migration of Cu, SO42− and Cl− towards anode were noticed. Chemical oxygen demand in soil significantly decreased upon employing electrokinetic. This technology may be exploited for faster and eco-friendly removal of dye in soil environment.

Processes regulating nitric oxide emissions from soils.

PubMed

Pilegaard, Kim

2013-07-05

Nitric oxide (NO) is a reactive gas that plays an important role in atmospheric chemistry by influencing the production and destruction of ozone and thereby the oxidizing capacity of the atmosphere. NO also contributes by its oxidation products to the formation of acid rain. The major sources of NO in the atmosphere are anthropogenic emissions (from combustion of fossil fuels) and biogenic emission from soils. NO is both produced and consumed in soils as a result of biotic and abiotic processes. The main processes involved are microbial nitrification and denitrification, and chemodenitrification. Thus, the net result is complex and dependent on several factors such as nitrogen availability, organic matter content, oxygen status, soil moisture, pH and temperature. This paper reviews recent knowledge on processes forming NO in soils and the factors controlling its emission to the atmosphere. Schemes for simulating these processes are described, and the results are discussed with the purpose of scaling up to global emission.

78 FR 48158 - Intent To Grant an Exclusive Patent License

Federal Register 2010, 2011, 2012, 2013, 2014

2013-08-07

... HYDROCARBONS AND ETHERS IN SUBSURFACE SOIL BY INTRODUCTION OF A SOLID OXYGEN SOURCE BY HYDRAULIC FRACTURING... IN SUBSURFACE SOIL BY INTRODUCTION OF A SOLID OXYGEN SOURCE BY HYDRAULIC FRACTURING, filed as U.S...

Temporal Dynamics in Soil Oxygen and Greenhouse Gases in Two Humid Tropical Forests

Treesearch

Daniel Liptzin; Whendee L. Silver; Matteo Detto

2011-01-01

Soil redox plays a key role in regulating biogeochemical transformations in terrestrial ecosystems, but the temporal and spatial patterns in redox and associated controls within and across ecosystems are poorly understood. Upland humid tropical forest soils may be particularly prone to fluctuating redox as abundant rainfall limits oxygen (O2) diffusion through finely...

The influence of biochar type on long-term stabilization for Cd and Cu in contaminated paddy soils.

PubMed

Li, Hongying; Ye, Xinxin; Geng, Zhigang; Zhou, Hongjian; Guo, Xisheng; Zhang, Yunxia; Zhao, Huijun; Wang, Guozhong

2016-03-05

Long-term effect of biochar on PTEs (potential toxic elements) immobilization depends upon biochar own property and its aging process in soil. To understand the role of biachar type on PTEs stabilization, two types of biochar, corn-straw-derived biochar (CB) and hardwood-derived biochar (HB), were compared for their efficacy in achieving a stable decrease in the bio-availability of Cd and Cu in soils. The 3-year pot-culture experiment showed that HB reduced the concentration of CaCl2-extractable Cd and Cu by 57.9 and 63.8% in soil, and Cd and Cu uptake by 63.6 and 56.3% in rice tissue respectively, in the first year, whereas these values increased in the next two years. On the other hand, CB decreased these values steadily year by year. At the end of the 3 years, CB at 5% level had lowered the levels of CaCl2-extractable Cd and Cu by 53.6 and 66.8%, respectively. These variations between CB and HB were due to the differences in the way the two types of biochar age in the soil. The aging process was simulated in the laboratory, and the XPS results showed that the oxidization of the biochars introduced more oxygen-containing groups (especially carboxyl) on the surface of CB than HB, leading to a correspondingly greater number of oxygenated binding sites for Cd and Cu in the case of CB. The content of lignin was the major factor resulting in the variation of oxidation degree in two biochars. These results suggest that it is important to select the right kind of biochar to stably decrease the bio-availability of potential toxic elements (Cd and Cu) in contaminated soils. Copyright © 2015 Elsevier B.V. All rights reserved.

Modern, Sangamon and Yarmouth soil development in loess of unglaciated southwestern Illinois

USGS Publications Warehouse

Grimley, D.A.; Follmer, L.R.; Hughes, R.E.; Solheid, P.A.

2003-01-01

The Thebes Section in unglaciated southwestern Illinois contains a well preserved ??? 500 kyr loess-paleosol sequence with four loesses and three interglacial soils. Various magnetic, mineralogical, and elemental properties were analyzed and compared over the thickness of soil sola. These proxies for soil] development intensity have the following trend: Yarmouth Geosol > Sangamon Geosol > modern soil. Quartz/plagioclase, Zr/Sr, and TiO2/Na2O ratios were most sensitive to weathering. Frequency dependent magnetic susceptibility and anhysteretic remanent magnetization, greatest in A horizons, also correspond well with soil development intensity. Neoformed mixed-layered kaolinite/expandables, suggestive of a warm/humid climate, were detected in the Sangamon and Yarmouth soil sola. Clay illuviation in soils was among the least sensitive indicators of soil development. Differences in properties among interglacial soils are interpreted to primarily reflect soil development duration, with climatic effects being secondary. Assuming logarithmic decreases in weathering rates, the observed weathering in the Sangamon Geosol is consistent with 50 kyr of interglacial weathering (Oxygen Isotope Stage 5) compared to 10 kyr for the modern soil (Oxygen Isotope Stage 1). We propose that the Yarmouth Geosol in the central Midwest formed over 180 kyr of interglacial weathering (including oxygen isotope stages 7, 9, and 11). ?? 2002 Elsevier Science Ltd. All rights reserved.

Research and application of method of oxygen isotope of inorganic phosphate in Beijing agricultural soils.

PubMed

Tian, Liyan; Guo, Qingjun; Zhu, Yongguan; He, Huijun; Lang, Yunchao; Hu, Jian; Zhang, Han; Wei, Rongfei; Han, Xiaokun; Peters, Marc; Yang, Junxing

2016-12-01

Phosphorus (P) in agricultural ecosystems is an essential and limited element for plants and microorganisms. However, environmental problems caused by P accumulation as well as by P loss have become more and more serious. Oxygen isotopes of phosphate can trace the sources, migration, and transformation of P in agricultural soils. In order to use the isotopes of phosphate oxygen, appropriate extraction and purification methods for inorganic phosphate from soils are necessary. Here, we combined two different methods to analyze the oxygen isotopic composition of inorganic phosphate (δ 18 O P ) from chemical fertilizers and different fractions (Milli-Q water, 0.5 mol L -1 NaHCO 3 (pH = 8.5), 0.1 mol L -1 NaOH and 1 mol L -1 HCl) of agricultural soils from the Beijing area. The δ 18 O P results of the water extracts and NaHCO 3 extracts in most samples were close to the calculated equilibrium value. These phenomena can be explained by rapid P cycling in soils and the influence of chemical fertilizers. The δ 18 O P value of the water extracts and NaHCO 3 extracts in some soil samples below the equilibrium value may be caused by the hydrolysis of organic P fractions mediated by extracellular enzymes. The δ 18 O P values of the NaOH extracts were above the calculated equilibrium value reflecting the balance state between microbial uptake of phosphate and the release of intracellular phosphate back to the soil. The HCl extracts with the lowest δ 18 O P values and highest phosphate concentrations indicated that the HCl fraction was affected by microbial activity. Hence, these δ 18 O p values likely reflected the oxygen isotopic values of the parent materials. The results suggested that phosphate oxygen isotope analyses could be an effective tool in order to trace phosphate sources, transformation processes, and its utilization by microorganisms in agricultural soils.

How Redox Fluctuation Shapes Microbial Community Structure and Mineral-Organic Matter Relationships in a Humid Tropical Forest Soil

NASA Astrophysics Data System (ADS)

Campbell, A.; Bhattacharyya, A.; Lin, Y.; Tfaily, M. M.; Paša-Tolić, L.; Chu, R. K.; Silver, W. L.; Nico, P. S.; Pett-Ridge, J.

2016-12-01

Wet tropical soils can alternate frequently between fully oxygenated and anaerobic conditions, constraining both the metabolism of tropical soil microorganisms, and the mineral-organic matter relationships that regulate many aspects of soil C cycling. Tropical forests are predicted to experience a 2-5°C temperature increase and substantial differences in the amount and timing of rainfall in the coming half century. Yet we have a poor understanding of how soil microbial activity and C cycling in these systems will respond to changes in environmental variability caused by climate change. Using a 44 day redox manipulation and isotope tracing experiment with soils from the Luquillo Experimental Forest, Puerto Rico, we examined patterns of tropical soil microorganisms, metabolites and soil chemistry when soils were exposed to different redox regimes - static oxic, static anoxic, high frequency redox fluctuation (4 days oxic, 4 days anoxic), or low frequency redox fluctuation (8 days oxic, 4 days anoxic). Replicate microcosms were harvested throughout the incubation to understand how changes in redox oscillation frequency altered microbial community structure and activity, organic matter turnover and fate, and soil chemistry. While gross soil respiration was highest in static oxic soils, respiration derived from added litter was highest in static anoxic soils, suggesting that decomposition of preexisting SOM was limited by O2 availability in the anoxic treatment. Microbial communities responded to shifting O2 availability in the different treatments, resulting in significant differences in DOC concentration and molecular composition (measured by FTICR-MS). DOC and Fe2+ concentrations were positively correlated for all four redox treatments, and rapidly increased following oscillation from oxic to anoxic conditions. These results, along with parallel studies of biogeochemical responses (Fe speciation, pH, P availability), suggest a highly responsive microbial and geochemical system, where the frequency of low-redox events controls exchanges of C between mineral-sorbed and aqueous pools.

SOLID OXYGEN SOURCE FOR BIOREMEDIATION IN SUBSURFACE SOILS

EPA Science Inventory

Sodium percarbonate was encapsulated in poly(vinylidene chloride) to determine its potential as a slow-release oxygen source for biodegradation of contaminan ts in subsurface soils. In laboratory studies under aqueous conditions, the encapsulated sodium percarbonate was estimate...

Availability of hydrogen for lunar base activities

NASA Technical Reports Server (NTRS)

Bustin, Roberta; Gibson, Everett K., Jr.

1992-01-01

Hydrogen will be needed on a lunar base to make water for consumables, to provide fuel, and to serve as a reducing agent in the extraction of oxygen from lunar minerals. This study was undertaken in order to learn more about the abundance and distribution of solar-wind-implanted hydrogen. Hydrogen was found in all samples studied, with concentrations, varying widely depending on soil maturity, grain size, and mineral composition. Seven cores returned from the Moon were studied. Although hydrogen was implanted in the upper surface layer of the regolith, it was found throughout the cores due to micrometeorite reworking of the soil.

Exchangeable Sodium Percentage decrease in saline sodic soil after Basic Oxygen Furnace Slag application in a lysimeter trial.

PubMed

Pistocchi, Chiara; Ragaglini, Giorgio; Colla, Valentina; Branca, Teresa Annunziata; Tozzini, Cristiano; Romaniello, Lea

2017-12-01

The Basic Oxygen Furnace Slag results from the conversion of hot metal into steel. Some properties of this slag, such as the high pH or calcium and magnesium content, makes it suitable for agricultural use as a soil amendment. Slag application to agricultural soils is allowed in some European countries, but to date there is no common regulation in the European Union. In Italy soils in coastal areas are often affected by excess sodium, which has several detrimental effects on the soil structure and crop production. In this study, carried out within an European project, the ability of the Basic Oxygen Furnace Slag to decrease the soil Exchangeable Sodium Percentage of a sodic soil was evaluated. A three-year lysimeter trial with wheat and tomato crops was carried out to assess the effects of two slag doses (D1, 3.5 g kg -1 year -1 and D, 2, 7 g kg -1 year -1 ) on exchangeable cations in comparison with unamended soil. In addition, the accumulation in the topsoil of vanadium and chromium, the two main trace metals present in the Basic Oxygen Furnace Slag, was assessed. After two years, the soil Exchangeable Sodium Percentage was reduced by 40% in D1 and 45% in D2 compared to the control. A concomitant increase in exchangeable bivalent cations (Ca ++ and Mg ++ ) was observed. We concluded that bivalent cations supplied with the slag competed with sodium for the sorption sites in the soil. The slag treatments also had a positive effect on tomato yields, which were higher than the control. Conversely the wheat yield was lower in the slag-amended soil, possibly because of the toxicity of vanadium added with the slag. This study showed that Basic Oxygen Furnace Slag decreased the Exchangeable Sodium Percentage, but precautions are needed to avoid the build up of toxic concentrations of trace metals in the soil, especially vanadium. Copyright © 2017 Elsevier Ltd. All rights reserved.

Chromium cycling in soils and water: links, gaps, and methods.

PubMed

Bartlett, R J

1991-05-01

The major links in the cycling of chromium in soils and in natural waters are between chromium(III) and chromium (VI). Between the larger links are lesser links involving processes of mobilization and oxidation of CrIII and reduction of CrVI. The gaps are mainly in our understanding of the factors that control these processes. If soluble CrIII is added to an "average" soil, a portion of it will become immediately oxidized by manganese oxides to CrVI. The rest of the CrIII may remain reduced for long periods of time, even in the presence of electron-accepting manganese oxides. However, this less available CrIII can be mobilized by low molecular weight organic complexers and then oxidized where redox conditions are optimal. Usually part of any CrVI added to a soil or sediment will be reduced instantly, especially under acid conditions. On the other hand, high concentrations of polluting CrVI may quickly exhaust the readily available reducing power of the matrix material and excess CrVI, the thermodynamically stable form in air, may persist for years in soils or lagoons without reduction. Cleanup of chromium pollution must involve the surrounding of both CrIII and CrVI with excesses of slowly available reducing substances and sealing them permanently from inputs of atmospheric oxygen. Monitoring the effectiveness of the measures is mandatory, but fortunately the chemical testing for CrVI in soil and water is simple and problem free compared with most colorimetric determinations.

In Situ Generation of Oxygen By Electrolysis and the Electrochemical Effects on Microorganisms’ Population

DTIC Science & Technology

1992-06-01

based on availability. Actinomyces can be grown on various media such as starch- casein or a relatively new, commercially available Actinomyces ...Isolation Agar. Actinomyces Isolation Agar was used in this study. Soil samples were obtained by taking cores (using pipettes with the tips removed...bacteria 0.01X Nutrient Agar 10-1 to 10- 21 days Filamentous fungi Sabouraud Maltose Agar 10"° to 10.3 3 days Actinomyces Actinomyces Isolat. Agar 101

Iron Redox Dynamics in Humid Tropical Forest Soils: Carbon Stabilization vs. Degradation?

NASA Astrophysics Data System (ADS)

Hall, S. J.; Silver, W. L.; Hammel, K.

2015-12-01

Most terrestrial soils exhibit a patchwork of oxygen (O2) availability that varies over spatial scales of microsites to catenas to landscapes, and over temporal scales of minutes to seasons. Oxygen fluctuations often drive microbial iron (Fe) reduction and abiotic/biotic Fe oxidation at the microsite scale, contributing to anaerobic carbon (C) mineralization and changes in soil physical and chemical characteristics, especially the dissolution and precipitation of short-range ordered Fe phases thought to stabilize C. Thus, O2 fluctuations and Fe redox cycling may have multiple nuanced and opposing impacts on different soil C pools, illustrated by recent findings from Fe-rich Oxisols and Ultisols in the Luquillo Experimental Forest, Puerto Rico. Spatial patterns in surface soil C stocks at the landscape scale correlated strongly (R2 = 0.98) with concentrations of reduced Fe (Fe(II)), reflecting constitutive differences in reducing conditions within and among sites that promote C accumulation in mineral soil horizons. Similarly, turnover times of a decadal-cycling pool of mineral-associated organic matter increased with Fe(II) across a catena, possibly reflecting the role of anaerobic microsites in long-term C stabilization. However, two different indices of short-range order Fe showed highly significant opposing relationships (positive and negative) with spatial variation in soil C concentrations, possibly reflecting a dual role of Fe in driving C stabilization via co-precipitation, and C solubilization and loss following dissimilatory Fe reduction. Consistent with the field data, laboratory incubations demonstrated that redox fluctuations can increase the contribution of biochemically recalcitrant C (lignin) to soil respiration, whereas addition of short-range order Fe dramatically suppressed lignin mineralization but had no impact on bulk soil respiration. Thus, understanding spatial and temporal patterns of Fe redox cycling may provide insight into explaining the relatively rapid turnover of biochemically recalcitrant and mineral-associated C in soils.

Effect of a residue after evaporation from industrial vitamin C fermentation on chemical and microbial properties of alkali-saline soil.

PubMed

Kong, Tao; Xu, Hui; Wang, Zhenyu; Sun, Hao; Wang, Lihua

2014-07-01

Residue after evaporation (RAE) from industrial vitamin C fermentation is emitted as a waste product at an amount of 60,000 tons per year in China. The disposal of RAE is difficult because of its high chemical oxygen demand (1.17×10(6) mg/l) and low pH (0.27). We hypothesized that RAE could be used as an ameliorant for alkali-saline soils, and tried to verify it by carrying out a pot experiment of pakchoi cultivation and to explore its effect on soil chemical and microbial properties. The results showed that pakchoi yield was increased by 28.13% and pakchoi quality was also enhanced under RAE treatment. The improved chemical and microbial properties of treated soil were also observed: soil pH was decreased from 9.19 to 9.03; total organic carbon, available phosphorus and available potassium were increased by 49.15%, 34.91% and 42.02%, respectively; number of culturable bacteria, actinomycetes and fungi, microbial biomass carbon and enzyme activity number were improved by 52.97%, 104.05%, 79.09%, 57.82% and 31.16%, respectively. These results suggested the residue application led to an improved soil quality and subsequently a higher yield and quality of pakchoi. This study provided a strong evidence for the feasibility of RAE as an ameliorant for alkali-saline soil.

Impact of glycerin and lignosulfonate on biodegradation of high explosives in soil.

PubMed

Won, Jongho; Borden, Robert C

2016-11-01

Soil microcosms were constructed and monitored to evaluate the impact of substrate addition and transient aerobic and anaerobic conditions on TNT, RDX and HMX biodegradation in grenade range soils. While TNT was rapidly biodegraded under both aerobic and anaerobic conditions with and without organic substrate, substantial biodegradation of RDX, HMX, and RDX daughter products was not observed under aerobic conditions. However, RDX and HMX were significantly biodegraded under anaerobic conditions, without accumulation of TNT or RDX daughter products (2-ADNT, 4-ADNT, MNX, DNX, and TNX). In separate microcosms containing grenade range soil, glycerin and lignosulfonate addition enhanced oxygen consumption, increasing the consumption rate >200% compared to untreated soils. Mathematical model simulations indicate that oxygen consumption rates of 5 to 20g/m 3 /d can be achieved with reasonable amendment loading rates. These results indicate that glycerin and lignosulfonate can be potentially used to stimulate RDX and HMX biodegradation by increasing oxygen consumption rates in soil. Copyright © 2016 Elsevier B.V. All rights reserved.

Heterogeneity of carbon loss and its temperature sensitivity in East-European subarctic tundra soils.

PubMed

Diáková, Kateřina; Čapek, Petr; Kohoutová, Iva; Mpamah, Promise A; Bárta, Jiří; Biasi, Christina; Martikainen, Pertti J; Šantrůčková, Hana

2016-09-01

Arctic peatlands store large stocks of organic carbon which are vulnerable to the climate change but their fate is uncertain. There is increasing evidence that a part of it will be lost as a result of faster microbial mineralization. We studied the vulnerability of 3500-5900 years old bare peat uplifted from permafrost layers by cryogenic processes to the surface of an arctic peat plateau. We aimed to find biotic and abiotic drivers of CLOSS from old peat and compare them with those of adjacent, young vegetated soils of the peat plateau and mineral tundra. The soils were incubated in laboratory at three temperatures (4°C, 12°C and 20°C) and two oxygen levels (aerobic, anaerobic). CLOSS was monitored and soil parameters (organic carbon quality, nutrient availability, microbial activity, biomass and stoichiometry, and extracellular oxidative and hydrolytic enzyme pools) were determined. We found that CLOSS from the old peat was constrained by low microbial biomass representing only 0.22% of organic carbon. CLOSS was only slightly reduced by the absence of oxygen and exponentially increased with temperature, showing the same temperature sensitivity under both aerobic and anaerobic conditions. We conclude that carbon in the old bare peat is stabilized by a combination of physical, chemical and biological controls including soil compaction, organic carbon quality, low microbial biomass and the absence of plants. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

[Stable Isotopes Characters of Soil Water Movement in Shijiazhuang City].

PubMed

Chen, Tong-tong; Chen, Hui; Han, Lu; Xing, Xing; Fu, Yang-yang

2015-10-01

In this study, we analyzed the stable hydrogen and oxygen isotope values of precipitation, soil water, irrigation water that collected in Shijiazhuang City from April 2013 to May 2014 to investigate the changing rule of the stable isotopes in different soil profiles and the process of soil water movement according to using the isotope tracer technique. The results showed that the mean excess deuterium of the local precipitation was -6.188 5 per thousand. Those reflected that the precipitation in Shijiazhuang City mainly brought by the monsoon from the ocean surface moisture, and also to some extent by the local evaporation. Precipitation was the main source of the soil water and the irrigation water played the supplementary role. In the rainy season, precipitation was enough to supply the soil water. The stable oxygen isotopes at 10-100 cm depth decreased with the increase of depth, the maximum depth of evaporation in the rainy season reached 40 cm. The peak of stable oxygen isotopes of soil water pushed down along the profile, which was infected by the interaction of the precipitation infiltration, evaporation and the mixing water.

Dynamics of Charcoal Alteration in a Tropical Biome: A Biochar-Based Study

NASA Astrophysics Data System (ADS)

Ascough, Philippa L.; Bird, Michael I.; Meredith, William; Snape, Colin; Large, D.; Tilston, Emma; Apperley, David; Bernabé, Ana; Shen, Licheng

2018-06-01

Pyrogenic carbon (PyC) is a polyaromatic residue of the incomplete combustion of biomass or fossil fuels. There is a growing recognition that PyC forms an important part of carbon budgets, due to production rates of 116–385 Tg C yr, and the size and ubiquity of PyC stocks in global carbon reservoirs. At least a proportion of PyC exists in a highly recalcitrant chemical form, raising the prospect of long-term carbon sequestration through soil amendment with 'biochar', which is generally produced with the aim of making a particularly recalcitrant form of PyC. However, there is growing evidence that some PyC, including biochar, can be both physically and chemically altered and degraded upon exposure to the environment over annual timescales, yet there is a lack of information concerning the mechanisms and determining factors of degradation. Here, we investigate three main factors; production temperature, feedstock composition, and the characteristics of the environment to which the material is exposed (e.g. pH, organic matter composition, oxygen availability) by analysis of biochar samples in a litterbag experiment before and after a year-long field study in the tropical rainforests of northeast Australia. We find that non-lignocellulosic feedstock has lower aromaticity, plus lower O/C and H/C ratios for a given temperature, and consequently lower carbon sequestration potential. The rate at which samples are altered is production temperature-dependant; however even in the highest temperature samples loss of the semi-labile aromatic carbon component is observed over one year. The results of 13C-MAS-NMR measurements suggest that direct oxygenation of aromatic structures may be even more important than carboxylation in environmental alteration of biochar (as a subset of PyC). There is a clear effect of depositional environment on biochar alteration even after the relatively short timescale of this study, as changes are most extensive in the most oxygenated material that was exposed on the soil surface. This is most likely the result of mineral ingress and colonization by soil microbiota. Consequently, oxygen availability and physical or chemical protection from sunlight and/or rainwater is vital in determining the alteration trajectory of this material.

Phosphorus cycling in natural and low input soil/plant systems: the role of soil microorganisms

NASA Astrophysics Data System (ADS)

Tamburini, F.; Bünemann, E. K.; Oberson, A.; Bernasconi, S. M.; Frossard, E.

2011-12-01

Availability of phosphorus (as orthophosphate, Pi) limits biological production in many terrestrial ecosystems. During the first phase of soil development, weathering of minerals and leaching of Pi are the processes controlling Pi concentrations in the soil solution, while in mature soils, Pi is made available by desorption of mineral Pi and mineralization of organic compounds. In agricultural soils additional Pi is supplied by fertilization, either with mineral P and/or organic inputs (animal manure or plant residues). Soil microorganisms (bacteria and fungi) mediate several processes, which are central to the availability of Pi to plants. They play a role in the initial release of Pi from the mineral phase, and through extracellular phosphatase enzymes, they decompose and mineralize organic compounds, releasing Pi. On the other hand, microbial immobilization and internal turnover of Pi can decrease the soil available Pi pool, competing in this way with plants. Using radio- and stable isotopic approaches, we show evidence from different soil/plant systems which points to the central role of the microbial activity. In the presented case studies, P contained in the soil microbial biomass is a larger pool than available Pi. In a soil chronosequence after deglaciation, stable isotopes of oxygen associated to phosphate showed that even in the youngest soils microbial activity highly impacted the isotopic signature of available Pi. These results suggested that microorganisms were rapidly taking up and cycling Pi, using it to sustain their community. Microbial P turnover time was faster in the young (about 20 days) than in older soils (about 120 days), reflecting a different functioning of the microbial community. Microbial community crashes, caused by drying/rewetting and freezing/thawing cycles, were most likely responsible for microbial P release to the available P pool. In grassland fertilization experiments with mineral NK and NPK amendments, microbial P turnover was faster in the P-free treatment. Laboratory incubation also showed a more rapid P uptake by microbial biomass in the NK than in the NPK treatment (37% and 6% of added 33P recovered in microbial P after 100 minutes in NK and NPK, respectively). The seasonal microbial P flux in both treatments was 1.5-4 times larger than the annual plant P uptake. In field studies carried out on highly weathered low P soils in Colombia, the comparison between grass-legume and grass-only pastures showed that the presence of legumes had an impact on the overall biological activity. In fact, microbial biomass and phosphatase activity were significantly larger in grass-legume pastures than in the legume-free experiments. Larger release of Pi from the organic P pool improved P availability to plants and pointed at a modified C:N:P stoichiometry along pathways of the nutrient cycle in the soil/plant system. All these data are evidence of a highly dynamic microbial P pool, which controls Pi concentration and, hence, availability for plants in natural and low input agricultural ecosystems.

The source of phosphate in the oxidation zone of ore deposits: Evidence from oxygen isotope compositions of pyromorphite

NASA Astrophysics Data System (ADS)

Burmann, Fabian; Keim, Maximilian F.; Oelmann, Yvonne; Teiber, Holger; Marks, Michael A. W.; Markl, Gregor

2013-12-01

Pyromorphite (Pb5[PO4]3Cl) is an abundant mineral in oxidized zones of lead-bearing ore deposits and due to its very low solubility product effectively binds Pb during supergene alteration of galena (PbS). The capacity of a soil or near-surface fluid to immobilize dissolved Pb depends critically on the availability of phosphate in this soil or fluid. Potential phosphorus sources in soil include (i) release during biological processes, i.e. leaching from litter/lysis of microbial cells (after intracellular enzyme activity) in soil and hydrolysis from soil organic matter by extracellular enzymes and (ii) inorganic phosphate from the dissolution of apatite in the adjacent basement rocks. Intracellular enzyme activity in plants/microorganisms associated with kinetic fractionation produces an oxygen isotope composition distinctly different from inorganic processes in soil. This study presents the first oxygen isotope data for phosphate (δ18OP) in pyromorphite and a comprehensive data set for apatite from crystalline rocks. We investigated 38 pyromorphites from 26 localities in the Schwarzwald (Southwest Germany) and five samples from localities outside the Schwarzwald in addition to 12 apatite separates from gneissic and granitic host rocks. Pyromorphites had δ18OP values between +10‰ and +19‰, comparable to literature data on δ18OP in the readily available P fraction in soil (resin-extractable P) from which minerals potentially precipitate in soils. δ18OP values below the range of equilibrium isotope fractionation can be attributed either to apatites that formed geochemically (δ18OP of apatites:+6‰ to +9‰) or less likely to biological processes (extracellular enzyme activity). However, for most of our samples isotopic equilibrium with ambient water was indicated, which suggests biological activity. Therefore, we conclude that the majority of pyromorphites in oxidized zones of ore bodies formed from biologically cycled phosphate. This study highlights that biological activity and Pb mobilization are intimately connected: in humid regions with high biological activity in soil, Pb might be precipitated rapidly due to biologically-released phosphate, whereas Pb will be released to the environment from ore deposits or mine dumps much more easily in arid regions with low biological activity, because pyromorphite cannot form due to limited supply of phosphorus. Phosphate from magmatic, metamorphic or sedimentary rocks: The most important phosphate-bearing mineral in such rocks is apatite (Ca5[(PO4)3(F,Cl,OH)]). In magmatic and metamorphic rocks it generally occurs as fluorapatite (Piccoli and Candela, 2002; Filippelli, 2008), whereas sedimentary rocks may also contain considerable amounts of carbonate-fluorapatite. Phosphorites are present in the geological record since the Lower Proterozoic (Cook and McElhinny, 1979; Shemesh et al., 1983). Alteration with low-pH fluids can dissolve apatite and thereby release geochemical phosphate (Filippelli, 2008). Low pH values may be attained by dissolution of atmospheric CO2 or by reaction with sulfides present in the rocks or in adjacent ore deposits. Phosphate of organic origin, such as from plants, animals or microorganisms: Phosphorus is required in most biological systems, as it is an essential element in major organic molecules such as adenosine triphosphate in the energy cycle, or in phospholipids, which form cell walls (Bucher, 2007; Filippelli, 2008). Organisms take up phosphorus as dissolved inorganic phosphate and cycle it through metabolic processes (intracellular enzyme activity). Once entering the soil, the organic material is decomposed by extracellular enzyme activity (hydrolysis of ester bonds) and phosphate is being released (Bünemann et al., 2011). Phosphate of anthropogenic origin: Since phosphate is a limiting factor in organism growth, it is an important ingredient of fertilizers in the agricultural industry. Also, phosphate can be found as ingredients in detergents, toothpaste and as a release of waste water treatment plants (Young et al., 2009). Anthropogenic effects will not be discussed further in the following. On this basis, we consider three different cases of pyromorphite formation as illustrated on the conceptual scheme of Fig. 1. Case 1: Pyromorphite grown recently (within the last hundreds of years) on rock surfaces in former mines. Both, phosphate released geochemically from igneous rocks and phosphate released biologically during leaching from litter/lysis of microbial cells and soil organic matter decomposition are possible sources. Case 2: Pyromorphite formation on mine dumps, below vegetation (recent, during tens to hundreds of years). Based on the specific setting of these samples investigated here (they were found exclusively below a large fern; see more details in the section on sample description), biologically-mediated P release provides the phosphate for pyromorphite growth. Case 3: Pyromorphite growth in the oxidized zones of ore bodies prior to human interference. Most samples of our study belong to this case.Phosphorus generally forms very strong covalent bonds (Huminicki and Hawthorne, 2002) and there is only negligible exchange of oxygen isotopes between phosphate and ambient water under most near-surface conditions without biological activity (Winter et al., 1940; Longinelli, 1965). The only important exchange of oxygen isotopes between phosphate and ambient water involves biological activity and the oxygen isotope composition of phosphate (δ18OP) may be modified by different enzymatic/cellular processes. Once phosphate is taken up by organisms, intracellular pyrophosphatase mediates internal P cycling. This is associated with a temperature-dependent equilibrium isotope fractionation due to the reversible exchange of O atoms between the phosphate molecule and cell water. As a result the δ18OP is equilibrated with the ambient water, and the equilibrium temperature can be calculated following the revised empirical equation from Longinelli and Nuti (1973) presented by Puceat et al. (2010): T(°C)=118.7-4.22[(δ18OP+(22.6-δ18ONBS120c))-δ18OW] where T is the temperature of the ambient water, δ18OP is the oxygen isotope composition of the phosphate at equilibrium conditions, δ18ONBS120c is the oxygen isotope composition of reference material NBS120c according to Vennemann et al. (2002) and δ18OW is the oxygen isotope composition of the ambient water. Knowledge of the δ18OP of ambient water and its temperature renders it possible to calculate a theoretical equilibrium value for δ18OP. If phosphate is again released from organisms into the soil, it will reflect the δ18OP of the cell-internal P cycling. In addition, extracellular enzymes are released in soil if the demand for P requires the hydrolysis of organic P in soil (McGill and Cole, 1981). Extracellular enzymes also transfer O atoms from water to phosphate and thus, change δ18OP. The associated isotopic fractionation factors vary between -10‰ (enzyme: 5‧-nucleotidase) and -30‰ (enzyme: alkaline phosphatase; Liang and Blake, 2006, 2009). All recent publications on δ18OP of phosphate in the readily available P fraction in soil (resin P) showed δ18OP values in the range calculated for isotopic equilibrium fractionation irrespective of environmental conditions (parent material, climate, biome). At most 20% down to 0% of the measured δ18OP fell outside the calculated isotopic equilibrium range (Angert et al., 2011, 2012; Tamburini et al., 2012). We therefore infer a dominant role of intracellular enzyme activity for δ18OP values in resin P in soil.Theoretical calculations by Lecuyer et al. (1999) imply that oxygen isotope exchange between phosphate and water can also occur in the absence of biological activity. An extrapolation of their equations to temperatures of 10 °C shows, however, that it takes more than 6000 years to exchange 10% of the phosphate oxygen (Colman et al., 2005). Traditionally, the oxygen isotope composition of phosphate has been used as a tool for determining paleotemperatures (e.g., Longinelli, 1984), but recent studies suggested to test its suitability for tracing phosphate sources in aquatic systems (Gruau et al., 2005; Elsbury et al., 2009; Young et al., 2009). Most of these studies deal with short-term ecological cycles and therefore the inorganic exchange of oxygen is negligible. However, this effect has to be considered for processes that happen in geological timescales.Due to the low phosphate concentrations in natural waters (Blake et al., 2005) and the low solubility product of pyromorphite, it is reasonable to assume almost all phosphate to precipitate as pyromorphite without any fractionation. Accordingly, the δ18OP of pyromorphite reflects the oxygen isotope composition of the dissolved phosphate in the water from which it precipitated and records the source, if this phosphate was not modified during fluid transport.Different phosphate reservoirs differ in their oxygen-isotope composition and with more and more data available it is possible to discriminate between different sources. Data for phosphates in aquatic systems are provided by Young et al. (2009): Phosphates of anthropogenic origin (fertilizers and the corresponding processing stages, detergents and toothpaste) show δ18OP values between +13.3‰ and +22.3‰, for phosphates from organic sources (vegetation leachate and animal waste) values between +14.2‰ and +23.1‰ are reported and a range between +8.4‰ and +14.2‰ is covered by phosphates of waste water treatment plants. For terrestrial ecosystems, Tamburini et al. (2012) reported δ18OP values between +4.5‰ and +31.4‰ with most data falling in the range of +12.4‰ to +31.4‰ for phosphate in plants (N = 11). Microbial phosphate in soil covered a range of +11‰ to +19‰. Resin-extractable P in soil as the readily available P fraction in soil from which P-containing minerals would precipitate, showed a range of 14.5-20.0‰ (Angert et al., 2011, 2012; Weiner et al., 2011; Tamburini et al., 2012). Additionally, Tamburini et al., 2012 reported values for apatite, most likely from the metamorphosed granitic bedrock, to be about +7‰. This is consistent with theoretical considerations by Shemesh et al. (1983) and with data from a gabbro (+4.1‰) and a tonalite (+6.7‰) reported by Taylor and Epstein (1962). Mizota et al. (1992) analyzed δ18OP of apatites from carbonatites, volcanic ashes and hydrothermal vugs covering a range of +0.2 to +12.2‰ (N = 10), whereas phosphate from phosphorites have higher values of up to +20‰ (e.g., Shemesh et al. (1983).This study investigates the oxygen isotope composition of phosphate in pyromorphite and in apatite from crystalline rocks. To evaluate possible phosphate sources, the results will be checked for isotopic equilibrium with different ambient waters and possible phosphate sources will be discussed.

An Excel®-based visualization tool of 2-D soil gas concentration profiles in petroleum vapor intrusion

PubMed Central

Verginelli, Iason; Yao, Yijun; Suuberg, Eric M.

2017-01-01

In this study we present a petroleum vapor intrusion tool implemented in Microsoft® Excel® using Visual Basic for Applications (VBA) and integrated within a graphical interface. The latter helps users easily visualize two-dimensional soil gas concentration profiles and indoor concentrations as a function of site-specific conditions such as source strength and depth, biodegradation reaction rate constant, soil characteristics and building features. This tool is based on a two-dimensional explicit analytical model that combines steady-state diffusion-dominated vapor transport in a homogeneous soil with a piecewise first-order aerobic biodegradation model, in which rate is limited by oxygen availability. As recommended in the recently released United States Environmental Protection Agency's final Petroleum Vapor Intrusion guidance, a sensitivity analysis and a simplified Monte Carlo uncertainty analysis are also included in the spreadsheet. PMID:28163564

An Excel®-based visualization tool of 2-D soil gas concentration profiles in petroleum vapor intrusion.

PubMed

Verginelli, Iason; Yao, Yijun; Suuberg, Eric M

2016-01-01

In this study we present a petroleum vapor intrusion tool implemented in Microsoft ® Excel ® using Visual Basic for Applications (VBA) and integrated within a graphical interface. The latter helps users easily visualize two-dimensional soil gas concentration profiles and indoor concentrations as a function of site-specific conditions such as source strength and depth, biodegradation reaction rate constant, soil characteristics and building features. This tool is based on a two-dimensional explicit analytical model that combines steady-state diffusion-dominated vapor transport in a homogeneous soil with a piecewise first-order aerobic biodegradation model, in which rate is limited by oxygen availability. As recommended in the recently released United States Environmental Protection Agency's final Petroleum Vapor Intrusion guidance, a sensitivity analysis and a simplified Monte Carlo uncertainty analysis are also included in the spreadsheet.

Long-term simulation of in situ biostimulation of polycyclic aromatic hydrocarbon-contaminated soil

PubMed Central

Jones, Maiysha D.; Singleton, David R.; Aitken, Michael D.

2016-01-01

A continuous-flow column study was conducted to evaluate the long-term effects of in situ biostimulation on the biodegradation of polycyclic aromatic hydrocarbons (PAHs) in soil from a manufactured gas plant site. Simulated groundwater amended with oxygen and inorganic nutrients was introduced into one column, while a second column receiving unamended groundwater served as a control. PAH and dissolved oxygen (DO) concentrations, as well as microbial community profiles, were monitored along the column length immediately before and at selected intervals up to 534 days after biostimulation commenced. Biostimulation resulted in significantly greater PAH removal than in the control condition (73% of total measured PAHs vs. 34%, respectively), with dissolution accounting for a minor amount of the total mass loss (~6%) in both columns. Dissolution was most significant for naphthalene, acenaphthene, and fluorene, accounting for >20% of the total mass removed for each. A known group of PAH-degrading bacteria, ‘Pyrene Group 2’ (PG2), was identified as a dominant member of the microbial community and responded favorably to biostimulation. Spatial and temporal variations in soil PAH concentration and PG2 abundance were strongly correlated to DO advancement, although there appeared to be transport of PG2 organisms ahead of the oxygen front. At an estimated oxygen demand of 6.2 mg O2/g dry soil and a porewater velocity of 0.8 m/day, it took between 374 and 466 days for oxygen breakthrough from the 1-m soil bed in the biostimulated column. This study demonstrated that the presence of oxygen was the limiting factor in PAH removal, as opposed to the abundance and/or activity of PAH-degrading bacteria once oxygen reached a previously anoxic zone. PMID:22311590

Soil Oxidation-Reduction Potential and Plant Photosynthetic Capacity in the Northern Pantanal of Mato Grosso, Brazil

NASA Astrophysics Data System (ADS)

Lathuilliere, M. J.; Johnson, M. S.; Dalmagro, H. J.; Pinto Junior, O. B.; Couto, E. G.

2013-12-01

Plant communities of the Pantanal wetland are able to survive long periods of climatic and physiological stress in the dry and wet seasons. During inundation, soil oxygen demand increases dramatically as reducing soil conditions create stress in the root system with possible impacts on photosynthetic capacity of plants. We look at inundation cycles of a tree island (locally known as a cordilheira) in the Northern Pantanal near Poconé, Mato Grosso, and relate soil oxidation-reduction potential and soil oxygen depletion to the photosynthetic capacity of two plant communities of flooded scrub forest (Vochysia divergens and Curatela americana). Results show a drop in soil oxidation-reduction potential of over 400 mV, to levels below the absolute value of -200 mV, following inundation around the tree island. Both plant species showed increased carbon assimilation at highest soil oxygen demand despite a change in stomatal conductance, suggesting adaptation to the inundated environment. Absolute values of soil oxidation-reduction potential also allow for the determination of specific soil chemical reactions characteristic of the tree island environment, namely the reduction of iron(III), or carbon dioxide which in turn produces methane. Our combined analysis of soil chemistry with plant ecophysiology allows for a better understanding of soil-plant interactions in the Pantanal, specifically the drivers of biogeochemical processes between inundation periods.

Evidence for photochemical production of reactive oxygen species in desert soils.

PubMed

Georgiou, Christos D; Sun, Henry J; McKay, Christopher P; Grintzalis, Konstantinos; Papapostolou, Ioannis; Zisimopoulos, Dimitrios; Panagiotidis, Konstantinos; Zhang, Gaosen; Koutsopoulou, Eleni; Christidis, George E; Margiolaki, Irene

2015-05-11

The combination of intense solar radiation and soil desiccation creates a short circuit in the biogeochemical carbon cycle, where soils release significant amounts of CO2 and reactive nitrogen oxides by abiotic oxidation. Here we show that desert soils accumulate metal superoxides and peroxides at higher levels than non-desert soils. We also show the photogeneration of equimolar superoxide and hydroxyl radical in desiccated and aqueous soils, respectively, by a photo-induced electron transfer mechanism supported by their mineralogical composition. Reactivity of desert soils is further supported by the generation of hydroxyl radical via aqueous extracts in the dark. Our findings extend to desert soils the photogeneration of reactive oxygen species by certain mineral oxides and also explain previous studies on desert soil organic oxidant chemistry and microbiology. Similar processes driven by ultraviolet radiation may be operating in the surface soils on Mars.

Root Zone Respiration on Hydroponically Grown Wheat Plant Systems

NASA Technical Reports Server (NTRS)

Soler-Crespo, R. A.; Monje, O. A.

2010-01-01

Root respiration is a biological phenomenon that controls plant growth and physiological development during a plant's lifespan. This process is dependent on the availability of oxygen in the system where the plant is located. In hydroponic systems, where plants are submerged in a solution containing vital nutrients but no type of soil, the availability of oxygen arises from the dissolved oxygen concentration in the solution. This oxygen concentration is dependent on the , gas-liquid interface formed on the upper surface of the liquid, as given by Henry's Law, depending on pressure and temperature conditions. Respiration rates of the plants rise as biomass and root zone increase with age. The respiration rate of Apogee wheat plants (Triticum aestivum) was measured as a function of light intensity (catalytic for photosynthesis) and CO2 concentration to determine their effect on respiration rates. To determine their effects on respiration rate and plant growth microbial communities were introduced into the system, by Innoculum. Surfactants were introduced, simulating gray-water usage in space, as another factor to determine their effect on chemical oxygen demand of microbials and on respiration rates of the plants. It is expected to see small effects from changes in CO2 concentration or light levels, and to see root respiration decrease in an exponential manner with plant age and microbial activity.

Iron Redox Cycling Drives Decomposition of Mineral-Associated C in Humid Tropical Forest Soils

NASA Astrophysics Data System (ADS)

Hall, S. J.; Mcnicol, G.; Silver, W. L.

2013-12-01

The stabilization of soil carbon (C) by reactive minerals and an inhibition of decomposition due to oxygen (O2) limitation (reducing conditions) have been proposed as drivers of the high soil C concentrations characteristic of humid tropical forests, which constitute a major terrestrial C reservoir. Here, we examined relationships between these factors and spatial patterns of C concentrations and C turnover (using radiocarbon modeling) in surface soils of the Luquillo Experimental Forest, Puerto Rico. We used concentrations of reduced iron (Fe(II)) as an index of reducing conditions given the importance of Fe reduction to anaerobic metabolism in these soils. Concentrations of Fe(II), reactive iron and aluminum (Al) minerals, interactions between Fe(II) and Al, and live fine root biomass explained most variation in C concentrations across the landscape (pseudo R2 = 0.84). Carbon increased with chelatable "poorly crystalline" Fe, in agreement with previous research, but C decreased with citrate/ascorbate extractable Fe, an index of Fe oxides susceptible to microbial reduction. We suggest that availability of Fe oxides to sustain anaerobic respiration partially offsets soil C accumulation in these ecosystems, despite the role of a subset of reactive Fe in promoting C stabilization. We estimated decomposition rates of mineral-associated C using 14C content of the heavy soil density fraction from a subset of samples. Turnover times averaged 108 years but decreased with Fe(II) concentrations. Thus, our data suggest that Fe redox cycling in soil microsites is associated with increased turnover of mineral-associated C in this fluctuating-oxygen environment, implying that the capacity of reactive metals to stabilize C may be partially contingent on O2 dynamics. Our results suggest a multifaceted role for reactive minerals in soil C cycling, emphasizing the importance of ecosystem-scale interactions among geochemical, physical, and biological factors.

Visualization of the Dynamic Rhizosphere Environment: Microbial and Biogeochemical Perspectives

NASA Astrophysics Data System (ADS)

Cardon, Z. G.; Forbes, E. S.; Thomas, F.; Herron, P. M.; Gage, D. J.; Thomas, S.; Larsen, M.; Arango Pinedo, C.; Sievert, S. M.; Giblin, A. E.

2014-12-01

The rhizosphere is a hotbed of nutrient cycling fueled by carbon from plants and controlled by microbes. Plants also strongly affect the rhizosphere by driving water flow into and out of roots, and by oxygenating saturated soil and sediment. Location and dynamics of plant-spurred microbial growth and activities are impossible to discern with destructive soil assays mixing microbe-scale soil microenvironments in a single"snap-shot" sample. Yet data are needed to inform (and validate) models describing microbial activity and biogeochemistry in the ebb and flow of the dynamic rhizosphere. Dynamics and localization of rapid microbial growth in the rhizosphere can be assessed over time using living soil microbiosensors. We used the bacterium Pseudomonas putida KT2440 as host to plasmid pZKH2 containing a fusion between the strong constituitive promoter nptII and luxCDABE(genes coding for light production). High light production by KT2440/pZKH2 correlated with rapid microbial growth supported by high carbon availability. Biosensors were used in clear-sided microcosms filled with non-sterile soil in which corn, black poplar or tomato were growing. KT2440/pZKH2 revealed that root tips are not necessarily the only, or even the dominant, hotspots for rhizosphere microbial growth, and carbon availability is highly variable in space and time around roots. Roots can also be sources of oxygen (O2) to the rhizosphere in saturated soil. We quantified spatial distributions of O2 using planar optodes placed against the face of sediment blocks cut from vegetated salt marsh at Plum Island Ecosystems LTER. Integrated over time, Spartina alterniflora roots were O2 sources to the rhizosphere. However, "sun-up" (light on) did not uniformly enhance rhizosphere O2 concentrations (as stomata opened and O2 production commenced). In some regions, the balance of O2 supply (from roots) and O2 demand (root and microbial) tipped toward demand at sun-up (repeatedly, over days). We speculate that in these regions, carbon produced during photosynthesis was released from roots and stimulated microbial O2 demand in the light. In situ, such dynamics in O2 and carbon availability around plant roots will influence interlinked sulfur, nitrogen, and carbon cycling in salt marsh rhizosphere.

SOME EFFECTS OF CADMIUM ON CONIFEROUS FOREST SOIL AND LITTER MICROCOSMS

EPA Science Inventory

Description and criticism is given of a preliminary design and use of a soil/litter microcosm in which oxygen, temperature, and humidity are kept constant, and oxygen generation and carbon dioxide and heat evolution rates are monitored. Using four microcosms, one acting as a dead...

Root Bending Is Antagonistically Affected by Hypoxia and ERF-Mediated Transcription via Auxin Signaling1[OPEN

PubMed Central

Eysholdt-Derzsó, Emese

2017-01-01

When plants encounter soil water logging or flooding, roots are the first organs to be confronted with reduced gas diffusion resulting in limited oxygen supply. Since roots do not generate photosynthetic oxygen, they are rapidly faced with oxygen shortage rendering roots particularly prone to damage. While metabolic adaptations to low oxygen conditions, which ensure basic energy supply, have been well characterized, adaptation of root growth and development have received less attention. In this study, we show that hypoxic conditions cause the primary root to grow sidewise in a low oxygen environment, possibly to escape soil patches with reduced oxygen availability. This growth behavior is reversible in that gravitropic growth resumes when seedlings are returned to normoxic conditions. Hypoxic root bending is inhibited by the group VII ethylene response factor (ERFVII) RAP2.12, as rap2.12-1 seedlings show exaggerated primary root bending. Furthermore, overexpression of the ERFVII member HRE2 inhibits root bending, suggesting that primary root growth direction at hypoxic conditions is antagonistically regulated by hypoxia and hypoxia-activated ERFVIIs. Root bending is preceded by the establishment of an auxin gradient across the root tip as quantified with DII-VENUS and is synergistically enhanced by hypoxia and the auxin transport inhibitor naphthylphthalamic acid. The protein abundance of the auxin efflux carrier PIN2 is reduced at hypoxic conditions, a response that is suppressed by RAP2.12 overexpression, suggesting antagonistic control of auxin flux by hypoxia and ERFVII. Taken together, we show that hypoxia triggers an escape response of the primary root that is controlled by ERFVII activity and mediated by auxin signaling in the root tip. PMID:28698356

The influence of soil properties and nutrients on conifer forest growth in Sweden, and the first steps in developing a nutrient availability metric

NASA Astrophysics Data System (ADS)

Van Sundert, Kevin; Horemans, Joanna A.; Stendahl, Johan; Vicca, Sara

2018-06-01

The availability of nutrients is one of the factors that regulate terrestrial carbon cycling and modify ecosystem responses to environmental changes. Nonetheless, nutrient availability is often overlooked in climate-carbon cycle studies because it depends on the interplay of various soil factors that would ideally be comprised into metrics applicable at large spatial scales. Such metrics do not currently exist. Here, we use a Swedish forest inventory database that contains soil data and tree growth data for > 2500 forests across Sweden to (i) test which combination of soil factors best explains variation in tree growth, (ii) evaluate an existing metric of constraints on nutrient availability, and (iii) adjust this metric for boreal forest data. With (iii), we thus aimed to provide an adjustable nutrient metric, applicable for Sweden and with potential for elaboration to other regions. While taking into account confounding factors such as climate, N deposition, and soil oxygen availability, our analyses revealed that the soil organic carbon concentration (SOC) and the ratio of soil carbon to nitrogen (C : N) were the most important factors explaining variation in normalized (climate-independent) productivity (mean annual volume increment - m3 ha-1 yr-1) across Sweden. Normalized forest productivity was significantly negatively related to the soil C : N ratio (R2 = 0.02-0.13), while SOC exhibited an empirical optimum (R2 = 0.05-0.15). For the metric, we started from a (yet unvalidated) metric for constraints on nutrient availability that was previously developed by the International Institute for Applied Systems Analysis (IIASA - Laxenburg, Austria) for evaluating potential productivity of arable land. This IIASA metric requires information on soil properties that are indicative of nutrient availability (SOC, soil texture, total exchangeable bases - TEB, and pH) and is based on theoretical considerations that are also generally valid for nonagricultural ecosystems. However, the IIASA metric was unrelated to normalized forest productivity across Sweden (R2 = 0.00-0.01) because the soil factors under consideration were not optimally implemented according to the Swedish data, and because the soil C : N ratio was not included. Using two methods (each one based on a different way of normalizing productivity for climate), we adjusted this metric by incorporating soil C : N and modifying the relationship between SOC and nutrient availability in view of the observed relationships across our database. In contrast to the IIASA metric, the adjusted metrics explained some variation in normalized productivity in the database (R2 = 0.03-0.21; depending on the applied method). A test for five manually selected local fertility gradients in our database revealed a significant and stronger relationship between the adjusted metrics and productivity for each of the gradients (R2 = 0.09-0.38). This study thus shows for the first time how nutrient availability metrics can be evaluated and adjusted for a particular ecosystem type, using a large-scale database.

Influence of biochar on the physical, chemical and retention properties of an amended sandy soil

NASA Astrophysics Data System (ADS)

Baiamonte, Giorgio; De Pasquale, Claudio; Parrino, Francesco; Crescimanno, Giuseppina

2017-04-01

Soil porosity plays an important role in soil-water retention and water availability to crops, potentially affecting both agricultural practices and environmental sustainability. The pore structure controls fluid flow and transport through the soil, as well as the relationship between the properties of individual minerals and plants. Moreover, the anthropogenic pressure on soil properties has produced numerous sites with extensive desertification process close to residential areas. Biochar (biologically derived charcoal) is produced by pyrolysis of biomasses under low oxygen conditions, and it can be applied for recycling organic waste in soils and increase soil fertility, improving soil structure and enhancing soil water storage and soil water movement. Soil application of biochar might have agricultural, environmental and sustainability advantages over the use of organic manures or compost, as it is a porous material with a high inner surface area. The main objectives of the present study were to investigate the possible application of biochar from forest residues, derived from mechanically chipped trunks and large branches of Abies alba M., Larix decidua Mill., Picea excelsa L., Pinus nigra A. and Pinus sylvestris L. pyrolysed at 450 °C for 48h, to improve soil structural and hydraulic properties (achieving a stabilization of soil). Different amount of biochar were added to a desertic sandy soil, and the effect on soil porosity water retention and water available to crops were investigated. The High Energy Moisture Characteristic (HEMC) technique was applied to investigate soil-water retention at high-pressure head levels. The adsorption and desorption isotherms of N2 on external surfaces were also determined in order to investigate micro and macro porosity ratio. Both the described model of studies on adsorption-desorption experiments with the applied isotherms model explain the increasing substrate porosity with a particular attention to the macro and micro porosity, respectively.

Metal availability and the expanding network of microbial metabolisms in the Archaean eon

NASA Astrophysics Data System (ADS)

Moore, Eli K.; Jelen, Benjamin I.; Giovannelli, Donato; Raanan, Hagai; Falkowski, Paul G.

2017-09-01

Life is based on energy gained by electron-transfer processes; these processes rely on oxidoreductase enzymes, which often contain transition metals in their structures. The availability of different metals and substrates has changed over the course of Earth's history as a result of secular changes in redox conditions, particularly global oxygenation. New metabolic pathways using different transition metals co-evolved alongside changing redox conditions. Sulfur reduction, sulfate reduction, methanogenesis and anoxygenic photosynthesis appeared between about 3.8 and 3.4 billion years ago. The oxidoreductases responsible for these metabolisms incorporated metals that were readily available in Archaean oceans, chiefly iron and iron-sulfur clusters. Oxygenic photosynthesis appeared between 3.2 and 2.5 billion years ago, as did methane oxidation, nitrogen fixation, nitrification and denitrification. These metabolisms rely on an expanded range of transition metals presumably made available by the build-up of molecular oxygen in soil crusts and marine microbial mats. The appropriation of copper in enzymes before the Great Oxidation Event is particularly important, as copper is key to nitrogen and methane cycling and was later incorporated into numerous aerobic metabolisms. We find that the diversity of metals used in oxidoreductases has increased through time, suggesting that surface redox potential and metal incorporation influenced the evolution of metabolism, biological electron transfer and microbial ecology.

Effects of Short-Term Biosolarization Using Mature Compost and Industrial Tomato Waste Amendments on the Generation and Persistence of Biocidal Soil Conditions and Subsequent Tomato Growth.

PubMed

Achmon, Yigal; Sade, Nir; Wilhelmi, María Del Mar Rubio; Fernández-Bayo, Jesus D; Harrold, Duff R; Stapleton, James J; VanderGheynst, Jean S; Blumwald, Eduardo; Simmons, Christopher W

2018-06-06

Conventional solarization and biosolarization with mature compost and tomato processing residue amendments were compared with respect to generation of pesticidal conditions and tomato ( Solanum lycopersicum L.) plant growth in treated soils. Soil oxygen depletion was examined as a response that has previously not been measured across multiple depths during biosolarization. For biosolarized soil, volatile fatty acids were found to accumulate concurrent with oxygen depletion, and the magnitude of these changes varied by soil depth. Two consecutive years of experimentation showed varying dissipation of volatile fatty acids from biosolarized soils post-treatment. When residual volatile fatty acids were detected in the biosolarized soil, fruit yield did not significantly differ from plants grown in solarized soil. However, when there was no residual volatile fatty acids in the soil at the time of planting, plants grown in biosolarized soil showed a significantly greater vegetation amount, fruit quantity, and fruit ripening than those of plants grown in solarized soil.

Method for obtaining oxygen from lunar or similar soil

NASA Technical Reports Server (NTRS)

Downs, W. R. (Inventor)

1973-01-01

Recovery of oxygen from soil containing metal oxides such as alumina, silica, calcia, magnesia, and ilmenite wherein the material containing the oxides is placed in a vessel and reacted with fluorine to provide oxygen and metal fluorides. The oxygen produced from the reaction is recovered and stored, after further purifying processes, and the metal fluorides are further reacted with potassium vapor to provide potassium fluoride and free metals. The potassium fluoride is than subjected to electrolysis whereby the potassium and fluorine are separated and are recycled for further use in the system. Valuable free metals are recovered for other uses.

Oxygen isotopes and P cycle in the soil/plant system: where are we heading?

NASA Astrophysics Data System (ADS)

Tamburini, Federica; Pfahler, Verena; von Sperber, Christian; Bernasconi, Stefano; Frossard, Emmanuel

2014-05-01

Phosphorus (P) is a major nutrient for all living organisms. In the terrestrial environment, P is a double-edged sword. For this reason, a better understanding of P cycling in the soil/plant system and the processes influencing its transfers and transformations is needed to provide agricultural and environmental managers with better concepts for P use. In fact, whereas the effect of abiotic reactions on the P concentration in the soil solution are well understood, we still know too little about the forms of soil organic P, and about the importance of soil biological processes (e.g. on organic matter mineralization-immobilization, or on the role of microorganisms) in controlling P availability. Together with more traditional and routine analysis for P, in the last 20 years researchers have started using the ratio of stable oxygen isotopes in phosphate (δ18O-P) to investigate P cycle in the soil/plant system. The scientific community interested in using this isotopic tracer is expanding because δ18O-P has proven to provide important information on biological processes. A large part of the published studies has shown how δ18O-P can be used to track P in the environment, providing information on P transfer from one pool and/or sink to the other. The other part has used this tool as a tracer of biological activity, clarifying how P is cycled through the microbial biomass or by plants. Together with a short review of the most relevant published results, we will discuss whether, and under which conditions, the δ18O-P can be applied to study P cycling and transformations from the process to the ecosystem level.

Manipulative lowering of the water table during summer does not affect CO2 emissions and uptake in a fen in Germany.

PubMed

Muhr, Jan; Höhle, Juliane; Otieno, Dennis O; Borken, Werner

2011-03-01

We simulated the effect of prolonged dry summer periods by lowering the water table on three manipulation plots (D(1-3)) in a minerotrophic fen in southeastern Germany in three years (2006-2008). The water table at this site was lowered by drainage and by excluding precipitation; three nonmanipulated control plots (C(1-3)) served as a reference. We found no significant differences in soil respiration (R(Soil)), gross primary production (GPP), or aboveground respiration (R(AG)) between the C(1-3) and D(1-3) plots in any of the measurement years. The water table on the control plots was naturally low, with a median water table (2006-2008) of 8 cm below the surface, and even lower during summer when respiratory activity was highest, with median values (C(1-3)) between 11 and 19 cm below the surface. If it is assumed that oxygen availability in the uppermost 10 cm was not limited by the location of the water table, manipulative lowering of the water table most likely increased oxygen availability only in deeper peat layers where we expect R(Soil) to be limited by poor substrate quality rather than anoxia. This could explain the lack of a manipulation effect. In a second approach, we estimated the influence of the water table on R(Soil) irrespective of treatment. The results showed a significant correlation between R(Soil) and water table, but with R(Soil) decreasing at lower water tables rather than increasing. We thus conclude that decomposition in the litter layer is not limited by waterlogging in summer, and deeper peat layers bear no significant decomposition potential due to poor substrate quality. Consequently, we do not expect enhanced C losses from this site due to increasing frequency of dry summers. Assimilation and respiration of aboveground vegetation were not affected by water table fluctuations between 10 and >60 cm depth, indicating the lack of stress resulting from either anoxia (high water table) or drought (low water table).

Microorganisms detected by enzyme-catalyzed reaction

NASA Technical Reports Server (NTRS)

Vango, S. P.; Weetall, H. H.; Weliky, N.

1966-01-01

Enzymes detect the presence of microorganisms in soils. The enzyme lysozymi is used to release the enzyme catalase from the microorganisms in a soil sample. The catalase catalyzes the decomposition of added hydrogen peroxide to produce oxygen which is detected manometrically. The partial pressure of the oxygen serves as an index of the samples bacteria content.

Microbial responses to chitin and chitosan in oxic and anoxic agricultural soil slurries

NASA Astrophysics Data System (ADS)

Wieczorek, A. S.; Hetz, S. A.; Kolb, S.

2014-06-01

Microbial degradation of chitin in soil substantially contributes to carbon cycling in terrestrial ecosystems. Chitin is globally the second most abundant biopolymer after cellulose and can be deacetylated to chitosan or can be hydrolyzed to N,N'-diacetylchitobiose and oligomers of N-acetylglucosamine by aerobic and anaerobic microorganisms. Which pathway of chitin hydrolysis is preferred by soil microbial communities is unknown. Supplementation of chitin stimulated microbial activity under oxic and anoxic conditions in agricultural soil slurries, whereas chitosan had no effect. Thus, the soil microbial community likely was more adapted to chitin as a substrate. In addition, this finding suggested that direct hydrolysis of chitin was preferred to the pathway that starts with deacetylation. Chitin was apparently degraded by aerobic respiration, ammonification, and nitrification to carbon dioxide and nitrate under oxic conditions. When oxygen was absent, fermentation products (acetate, butyrate, propionate, hydrogen, and carbon dioxide) and ammonia were detected, suggesting that butyric and propionic acid fermentation, along with ammonification, were likely responsible for anaerobic chitin degradation. In total, 42 different chiA genotypes were detected of which twenty were novel at an amino acid sequence dissimilarity of less than 50%. Various chiA genotypes responded to chitin supplementation and affiliated with a novel deep-branching bacterial chiA genotype (anoxic conditions), genotypes of Beta- and Gammaproteobacteria (oxic and anoxic conditions), and Planctomycetes (oxic conditions). Thus, this study provides evidence that detected chitinolytic bacteria were catabolically diverse and occupied different ecological niches with regard to oxygen availability enabling chitin degradation under various redox conditions on community level.

Measuring carbon and oxygen isotope signals of photosynthesis and respiration: first field results from a chamber system coupled to tunable diode laser spectrometers

NASA Astrophysics Data System (ADS)

Wingate, L.; Burlett, R.; Bosc, A.; Cross, A.; Devaux, M.; Grace, J.; Loustau, D.; Seibt, U.; Ogée, J.

2007-12-01

Studying the carbon and oxygen stable isotope signals from plants and soils can help us gain insight to mechanistic processes responsible for the net exchange of CO2 and water cycled between terrestrial ecosystems and the atmosphere. Chamber field measurements of component fluxes and their isotopic composition have been reported for a few ecosystems. These observations have revealed that isotopic signals for carbon and oxygen are dynamic over relatively short time scales (hrs and days) for both branches and soils (Seibt et al., 2006a; 2006b; Wingate et al., 2007), and not fully explained by currently available models (Seibt et al., 2006b; Wingate et al., 2007). Ecosystem isotope studies have been limited by flask sampling requirements in the past. To evaluate and refine our models of isotopic fractionation by plants and soil, we need high resolution continuous isotopic measurements over the growing season for different ecosystems. In this study, we coupled chambers with tunable diode laser spectroscopy techniques in the field to continuously capture the isotopic signals from the most important component fluxes contributing to the net ecosystem exchange of CO2 in a Pinus pinaster forest in south-west France. We obtained profiles of the carbon and oxygen isotope content of CO2 within and above the forest canopy. In addition, we measured branch photosynthetic 13C and 18O discrimination alongside the 13C and 18O isotopic composition of the branch, stem and soil respiration during a 6-month period in 2007. In this talk, we will present the first results from this field campaign. References Seibt, U., Wingate, L., Berry, J.A. and Lloyd, J. (2006a) Non steady state effects in diurnal 18O discrimination by Picea sitchensis branches in the field. Plant, Cell and Environment Vol 29, 928-939. Seibt, U., Wingate, L., Lloyd, J. and Berry, J.A. (2006b) Diurnally variable δ18O signatures of soil CO2 fluxes indicate carbonic anhydrase activity in a forest soil. JGR-Biogeosciences, Vol. 111, G04005, doi:10.1029/2006JG000177. Seibt, U., Wingate, L. and Berry, J.A. (2007) Nocturnal stomatal conductance effects on the δ18O of foliage gas exchange observed in two forest ecosystems. Tree Physiology, Vol. 27, 585-595. Wingate, L., Seibt, U., Moncrieff, J.B., Jarvis, P.G. and Lloyd, J. (2007) Variations in 13C discrimination during CO2 exchange by Picea sitchensis branches in the field. Plant, Cell and Environment doi: 10.1111/j.1365-3040.2007.01647.

Integrating spatial and temporal oxygen data to improve the quantification of in situ petroleum biodegradation rates.

PubMed

Davis, Gregory B; Laslett, Dean; Patterson, Bradley M; Johnston, Colin D

2013-03-15

Accurate estimation of biodegradation rates during remediation of petroleum impacted soil and groundwater is critical to avoid excessive costs and to ensure remedial effectiveness. Oxygen depth profiles or oxygen consumption over time are often used separately to estimate the magnitude and timeframe for biodegradation of petroleum hydrocarbons in soil and subsurface environments. Each method has limitations. Here we integrate spatial and temporal oxygen concentration data from a field experiment to develop better estimates and more reliably quantify biodegradation rates. During a nine-month bioremediation trial, 84 sets of respiration rate data (where aeration was halted and oxygen consumption was measured over time) were collected from in situ oxygen sensors at multiple locations and depths across a diesel non-aqueous phase liquid (NAPL) contaminated subsurface. Additionally, detailed vertical soil moisture (air-filled porosity) and NAPL content profiles were determined. The spatial and temporal oxygen concentration (respiration) data were modeled assuming one-dimensional diffusion of oxygen through the soil profile which was open to the atmosphere. Point and vertically averaged biodegradation rates were determined, and compared to modeled data from a previous field trial. Point estimates of biodegradation rates assuming no diffusion ranged up to 58 mg kg(-1) day(-1) while rates accounting for diffusion ranged up to 87 mg kg(-1) day(-1). Typically, accounting for diffusion increased point biodegradation rate estimates by 15-75% and vertically averaged rates by 60-80% depending on the averaging method adopted. Importantly, ignoring diffusion led to overestimation of biodegradation rates where the location of measurement was outside the zone of NAPL contamination. Over or underestimation of biodegradation rate estimates leads to cost implications for successful remediation of petroleum impacted sites. Crown Copyright © 2013. Published by Elsevier Ltd. All rights reserved.

Development of a Reactor for the Extraction of Oxygen and Volatiles From Lunar Regolith

NASA Technical Reports Server (NTRS)

Kleinhenz, Julie; Yuan, Zengguang; Sacksteder, Kurt; Caruso, John

2009-01-01

The RESOLVE (Regolith and Environment Science, Oxygen and Lunar Volatiles Extraction) Project, aims to extract and quantify useful resources from lunar soil. The reactor developed for RESOLVE is a dual purpose system, designed to evolve both water, at 150 C and up to 80 psig, and oxygen, using hydrogen reduction at 900 C. A variety of laboratory tests were performed to verify its operation and to explore the properties of the analog site soil. The results were also applied to modeling efforts which are being used to estimate the apparent thermal properties of the soil. The experimental and numerical results, along with the analog site tests, will be used to evolve and optimize future reactor designs.

Pyrolysis temperature influences ameliorating effects of biochars on acidic soil.

PubMed

Wan, Qing; Yuan, Jin-Hua; Xu, Ren-Kou; Li, Xing-Hui

2014-02-01

The biochars were prepared from straws of canola, corn, soybean, and peanut at different temperatures of 300, 500, and 700 °C by means of oxygen-limited pyrolysis.Amelioration effects of these biochars on an acidic Ultisol were investigated with incubation experiments, and application rate of biochars was 10 g/kg. The incorporation of these biochars induced the increase in soil pH, soil exchangeable base cations, base saturation, and cation exchange capacity and the decrease in soil exchangeable acidity and exchangeable Al. The ameliorating effects of biochars on acidic soil increased with increase in their pyrolysis temperature. The contribution of oxygen-containing functional groups on the biochars to their ameliorating effects on the acidic soil decreased with the rise in pyrolysis temperature, while the contribution from carbonates in the biochars changed oppositely. The incorporation of the biochars led to the decrease in soil reactive Al extracted by 0.5mol/L CuCl2, and the content of reactive Al was decreased with the increase in pyrolysis temperature of incorporated biochars. The biochars generated at 300 °C increased soil organically complexed Al due to ample quantity of oxygen-containing functional groups such as carboxylic and phenolic groups on the biochars, while the biochars generated at 500 and 700 °C accelerated the transformation of soil exchangeable Al to hydroxyl-Al polymers due to hydrolysis of Al at higher pH. Therefore, the crop straw-derived biochars can be used as amendments for acidic soils and the biochars generated at relatively high temperature have great ameliorating effects on the soils.

Vertical Distribution of Soil Denitrifying Communities in a Wet Sclerophyll Forest under Long-Term Repeated Burning.

PubMed

Liu, Xian; Chen, Chengrong; Wang, Weijin; Hughes, Jane M; Lewis, Tom; Hou, Enqing; Shen, Jupei

2015-11-01

Soil biogeochemical cycles are largely mediated by microorganisms, while fire significantly modifies biogeochemical cycles mainly via altering microbial community and substrate availability. Majority of studies on fire effects have focused on the surface soil; therefore, our understanding of the vertical distribution of microbial communities and the impacts of fire on nitrogen (N) dynamics in the soil profile is limited. Here, we examined the changes of soil denitrification capacity (DNC) and denitrifying communities with depth under different burning regimes, and their interaction with environmental gradients along the soil profile. Results showed that soil depth had a more pronounced impact than the burning treatment on the bacterial community size. The abundance of 16S rRNA and denitrification genes (narG, nirK, and nirS) declined exponentially with soil depth. Surprisingly, the nosZ-harboring denitrifiers were enriched in the deeper soil layers, which was likely to indicate that the nosZ-harboring denitrifiers could better adapt to the stress conditions (i.e., oxygen deficiency, nutrient limitation, etc.) than other denitrifiers. Soil nutrients, including dissolved organic carbon (DOC), total soluble N (TSN), ammonium (NH(4)(+)), and nitrate (NO(3)(-)), declined significantly with soil depth, which probably contributed to the vertical distribution of denitrifying communities. Soil DNC decreased significantly with soil depth, which was negligible in the depths below 20 cm. These findings have provided new insights into niche separation of the N-cycling functional guilds along the soil profile, under a varied fire disturbance regime.

Hell and High Water: Diminished Septic System Performance in Coastal Regions Due to Climate Change

PubMed Central

Cooper, Jennifer A.; Loomis, George W.; Amador, Jose A.

2016-01-01

Climate change may affect the ability of soil-based onsite wastewater treatment systems (OWTS) to treat wastewater in coastal regions of the Northeastern United States. Higher temperatures and water tables can affect treatment by reducing the volume of unsaturated soil and oxygen available for treatment, which may result in greater transport of pathogens, nutrients, and biochemical oxygen demand (BOD5) to groundwater, jeopardizing public and aquatic ecosystem health. The soil treatment area (STA) of an OWTS removes contaminants as wastewater percolates through the soil. Conventional STAs receive wastewater from the septic tank, with infiltration occurring deeper in the soil profile. In contrast, shallow narrow STAs receive pre-treated wastewater that infiltrates higher in the soil profile, which may make them more resilient to climate change. We used intact soil mesocosms to quantify the water quality functions of a conventional and two types of shallow narrow STAs under present climate (PC; 20°C) and climate change (CC; 25°C, 30 cm elevation in water table). Significantly greater removal of BOD5 was observed under CC for all STA types. Phosphorus removal decreased significantly from 75% (PC) to 66% (CC) in the conventional STA, and from 100% to 71–72% in shallow narrow STAs. No fecal coliform bacteria (FCB) were released under PC, whereas up to 17 and 20 CFU 100 mL-1 were released in conventional and shallow narrow STAs, respectively, under CC. Total N removal increased from 14% (PC) to 19% (CC) in the conventional STA, but decreased in shallow narrow STAs, from 6–7% to less than 3.0%. Differences in removal of FCB and total N were not significant. Leaching of N in excess of inputs was also observed in shallow narrow STAs under CC. Our results indicate that climate change can affect contaminant removal from wastewater, with effects dependent on the contaminant and STA type. PMID:27583363

Hell and High Water: Diminished Septic System Performance in Coastal Regions Due to Climate Change.

PubMed

Cooper, Jennifer A; Loomis, George W; Amador, Jose A

2016-01-01

Climate change may affect the ability of soil-based onsite wastewater treatment systems (OWTS) to treat wastewater in coastal regions of the Northeastern United States. Higher temperatures and water tables can affect treatment by reducing the volume of unsaturated soil and oxygen available for treatment, which may result in greater transport of pathogens, nutrients, and biochemical oxygen demand (BOD5) to groundwater, jeopardizing public and aquatic ecosystem health. The soil treatment area (STA) of an OWTS removes contaminants as wastewater percolates through the soil. Conventional STAs receive wastewater from the septic tank, with infiltration occurring deeper in the soil profile. In contrast, shallow narrow STAs receive pre-treated wastewater that infiltrates higher in the soil profile, which may make them more resilient to climate change. We used intact soil mesocosms to quantify the water quality functions of a conventional and two types of shallow narrow STAs under present climate (PC; 20°C) and climate change (CC; 25°C, 30 cm elevation in water table). Significantly greater removal of BOD5 was observed under CC for all STA types. Phosphorus removal decreased significantly from 75% (PC) to 66% (CC) in the conventional STA, and from 100% to 71-72% in shallow narrow STAs. No fecal coliform bacteria (FCB) were released under PC, whereas up to 17 and 20 CFU 100 mL-1 were released in conventional and shallow narrow STAs, respectively, under CC. Total N removal increased from 14% (PC) to 19% (CC) in the conventional STA, but decreased in shallow narrow STAs, from 6-7% to less than 3.0%. Differences in removal of FCB and total N were not significant. Leaching of N in excess of inputs was also observed in shallow narrow STAs under CC. Our results indicate that climate change can affect contaminant removal from wastewater, with effects dependent on the contaminant and STA type.

Mars resources

NASA Technical Reports Server (NTRS)

Duke, Michael B.

1986-01-01

The most important resources of Mars for the early exploration phase will be oxygen and water, derived from the Martian atmosphere and regolith, which will be used for propellant and life support. Rocks and soils may be used in unprocessed form as shielding materials for habitats, or in minimally processed form to expand habitable living and work space. Resources necessary to conduct manufacturing and agricultural projects are potentially available, but will await advanced stages of Mars habitation before they are utilized.

Production of oxygen from lunar soil by molten salt electrolysis

NASA Technical Reports Server (NTRS)

Keller, Rudolf

1989-01-01

A simple approach to utilizing lunar resources proposes to dissolve lunar soil, without or with little beneficiation, in a suitable molten salt and to electrolyze the oxides to oxygen and a metal byproduct. The envisioned process and the required technological advances are discussed. Promising electrolysis conditions have been identified in a recent experimental program to manufacture silicon and aluminum from anorthite.

Poor Aeration Curtails Slash Pine Root Growth and Nutrient Uptake

Treesearch

Eugene Shoulders

1976-01-01

Slash pine may absorb nutrients and water best in spring and early summer because soil moisture, soil aeration, and temperature are apparently optimum at this time. One-year-old slash pine seedlings maintained at a high oxygen level grew about 1% times as many roots as were produced at a low oxygen level. No other environmental conditions significantly influenced root...

Geochemical patterns and microbial contribution to iron plaque formation in the rice plant rhizosphere

NASA Astrophysics Data System (ADS)

Maisch, Markus; Murata, Chihiro; Unger, Julia; Kappler, Andreas; Schmidt, Caroline

2015-04-01

Rice is the major food source for more than half of the world population and 80 percent of the worldwide rice cultivation is performed on water logged paddy soils. The establishment of reducing conditions in the soil and across the soil-water interface not only stimulates the microbial production and release of the greenhouse gas methane. These settings also create optimal conditions for microbial iron(III) reduction and therefore saturate the system with reduced ferrous iron. Through the reduction and dissolution of ferric minerals that are characterized by their high surface activity, sorbed nutrients and contaminants (e.g. arsenic) will be mobilized and are thus available for uptake by plants. Rice plants have evolved a strategy to release oxygen from their roots in order to prevent iron toxification in highly ferrous environments. The release of oxygen to the reduced paddy soil causes ferric iron plaque formation on the rice roots and finally increases the sorption capacity for toxic metals. To this date the geochemical and microbiological processes that control the formation of iron plaque are not deciphered. It has been hypothesized that iron(II)-oxidizing bacteria play a potential role in the iron(III) mineral formation along the roots. However, not much is known about the actual processes, mineral products, and geochemical gradients that establish within the rhizosphere. In the present study we have developed a growth set-up that allows the co-cultivation of rice plants and iron(II)-oxidizing bacteria, as well as the visual observation and in situ measurement of geochemical parameters. Oxygen and dissolved iron(II) gradients have been measured using microelectrodes and show geochemical hot spots that offer optimal growth conditions for microaerophilic iron(II) oxidizers. First mineral identification attempts of iron plaque have been performed using Mössbauer spectroscopy and microscopy. The obtained results on mineraology and crystallinity have been compared to mineralogical data from purely biotic (microaerophilic) and abiotic iron mineral formation processes.

Transformation of soil microbial community structure in response to anaerobic soil disinfestation for soil-borne disease control in strawberry

USDA-ARS?s Scientific Manuscript database

Anaerobic soil disinfestation (ASD) has been used to control soil-borne pathogens and nematodes in various plant production systems including strawberries. Disease control is commonly attributed to the depletion of oxygen and the generation of toxic compounds, including organic acids and volatiles....

Lunar Soil Particle Separator

NASA Technical Reports Server (NTRS)

Berggren, Mark

2010-01-01

The Lunar Soil Particle Separator (LSPS) beneficiates soil prior to in situ resource utilization (ISRU). It can improve ISRU oxygen yield by boosting the concentration of ilmenite, or other iron-oxide-bearing materials found in lunar soils, which can substantially reduce hydrogen reduction reactor size, as well as drastically decreasing the power input required for soil heating

In-situ generation of oxygen-releasing metal peroxides

DOEpatents

Looney, Brian B.; Denham, Miles E.

2007-01-09

A method for remediation of contaminants in soil and groundwater is disclosed. The method generates oxygen releasing solids in groundwater or soil by injecting an aqueous energetic oxidant solution containing free radicals, oxidative conditions can be created within or ahead of a contaminant plume. Some contaminants may be remediated directly by reaction with the free radicals. Additionally and more importantly, the free radicals create an oxidative condition whereby native or injected materials, especially metals, are converted to peroxides. These peroxides provide a long-term oxygen reservoir, releasing oxygen relatively slowly over time. The oxygen can enhance microbial metabolism to remediate contaminants, can react with contaminant metals either to form immobile precipitants or to mobilize other metals to permit remediation through leaching techniques. Various injection strategies for injecting the energetic oxidant solution are also disclosed.

Experimental drought in a tropical rain forest increases soil carbon dioxide losses to the atmosphere

USGS Publications Warehouse

Cleveland, C.C.; Wieder, W.R.; Reed, S.C.; Townsend, A.R.

2010-01-01

Climate models predict precipitation changes for much of the humid tropics, yet few studies have investigated the potential consequences of drought on soil carbon (C) cycling in this important biome. In wet tropical forests, drought could stimulate soil respiration via overall reductions in soil anoxia, but previous research suggests that litter decomposition is positively correlated with high rainfall fluxes that move large quantities of dissolved organic matter (DOM) from the litter layer to the soil surface. Thus, reduced rainfall could also limit C delivery to the soil surface, reducing respiration rates. We conducted a throughfall manipulation experiment to investigate how 25% and 50% reductions in rainfall altered both C movement into soils and the effects of those DOM fluxes on soil respiration rates. In response to the experimental drought, soil respiration rates increased in both the -25% and -50% treatments. Throughfall fluxes were reduced by 26% and 55% in the-25% and-50% treatments, respectively. However, total DOM fluxes leached from the litter did not vary between treatments, because the concentrations of leached DOM reaching the soil surface increased in response to the simulated drought. Annual DOM concentrations averaged 7.7 ?? 0.8, 11.2 ?? 0.9, and 15.8 ?? 1.2 mg C/L in the control, -25%, and -50% plots, respectively, and DOM concentrations were positively correlated with soil respiration rates. A laboratory incubation experiment confirmed the potential importance of DOM concentration on soil respiration rates, suggesting that this mechanism could contribute to the increase in CO2 fluxes observed in the reduced rainfall plots. Across all plots, the data suggested that soil CO2 fluxes were partially regulated by the magnitude and concentration of soluble C delivered to the soil, but also by soil moisture and soil oxygen availability. Together, our data suggest that declines in precipitation in tropical rain forests could drive higher CO2 fluxes to the atmosphere both via increased soil O2 availability and through responses to elevated DOM concentrations. ?? 2010 by the Ecological Society of America.

Experimental drought in a tropical rain forest increases soil carbon dioxide losses to the atmosphere

USGS Publications Warehouse

Cleveland, Cory C.; Wieder, William R.; Reed, Sasha C.; Townsend, Alan R.

2010-01-01

Climate models predict precipitation changes for much of the humid tropics, yet few studies have investigated the potential consequences of drought on soil carbon (C) cycling in this important biome. In wet tropical forests, drought could stimulate soil respiration via overall reductions in soil anoxia, but previous research suggests that litter decomposition is positively correlated with high rainfall fluxes that move large quantities of dissolved organic matter (DOM) from the litter layer to the soil surface. Thus, reduced rainfall could also limit C delivery to the soil surface, reducing respiration rates. We conducted a throughfall manipulation experiment to investigate how 25% and 50% reductions in rainfall altered both C movement into soils and the effects of those DOM fluxes on soil respiration rates. In response to the experimental drought, soil respiration rates increased in both the -25% and -50% treatments. Throughfall fluxes were reduced by 26% and 55% in the -25% and -50% treatments, respectively. However, total DOM fluxes leached from the litter did not vary between treatments, because the concentrations of leached DOM reaching the soil surface increased in response to the simulated drought. Annual DOM concentrations averaged 7.7 ± 0.8, 11.2 ± 0.9, and 15.8 ± 1.2 mg C/L in the control, -25%, and -50% plots, respectively, and DOM concentrations were positively correlated with soil respiration rates. A laboratory incubation experiment confirmed the potential importance of DOM concentration on soil respiration rates, suggesting that this mechanism could contribute to the increase in CO2 fluxes observed in the reduced rainfall plots. Across all plots, the data suggested that soil CO2 fluxes were partially regulated by the magnitude and concentration of soluble C delivered to the soil, but also by soil moisture and soil oxygen availability. Together, our data suggest that declines in precipitation in tropical rain forests could drive higher CO2 fluxes to the atmosphere both via increased soil O2 availability and through responses to elevated DOM concentrations.

Physiological response of Cistus monspeliensis L. growing in two mine areas of the Iberian Pyrite Belt

NASA Astrophysics Data System (ADS)

Arenas Lago, Daniel; Carvalho, Luisa C.; Santos, Erika S.; Abreu, Maria Manuela; Andrade, María Luisa

2015-04-01

São Domingos and Lousal mines, nowadays in abandoned state, are located in Portugal, in the Iberian Pyrite Belt, a world-class volcanic-hosted massive sulfide. As a result of the intense mining activity large volumes of wastes containing metal(loid)s were partly exposed to weathering realising potential hazardous elements contaminating waters, soils and sediments. In both mines, a great part of the contaminated areas is relatively covered by several wild species. These species have developed mechanisms of response to oxidative stress originated by high concentration of metal(loid)s in plant tissues, whose presence leads to the formation of reactive oxygen species, thus causing oxidative damage. The main objective of this study was to evaluate changes in the ecophysiological behaviour of Cistus monspeliensis L., which grows spontaneously in both mine areas, in soils containing high concentrations of metal(loid)s. With this purpose, the variation of some physiological parameters was analysed in order to identify which parameters can be indicators of the plant'sresponse to oxidative stress. Representative soils from rhizosphere and plants were sampled, in the same locations, in different areas of São Domingos and Lousal mines and in an uncontaminated area nearby São Domingos. Soils were characterized for the classic properties. Multielemental total concentration was analysed in soils and plants (shoots and roots), and multielemental concentration in the available fraction of soils. Pigments (chlorophylls, anthocyanins and carotenoids), glutathione, ascorbate, H2O2 and antioxidative enzyme activities were measured in plant shoots. In general, total and available concentrations (mg/kg) of Zn (total 149-463; available 2-16), As (total 62-3030; available 0.03-1.9), Cd (total 0.3-1.2; available 0.01-0.05), Cu (total 79-375; available 0.8-10) and Pb (total 95-9210; available 0.2-40) are significantly higher in mine soils than in uncontaminated soils Zn (total 92-123; available <0.6), As (total 18-20; available <0.08), Cd (total <0.3; available <0.01), Cu (total 25-47; available <0.1) and Pb (total 28-50; < available 0.08). Also, shoots and roots of the plants collected in both mine areas contain in general higher concentrations (mg/kg) of As (shoot 0.6-75; root 0.8-13.5)and Pb (shoot 2.5-35; root 1.8-91) than plants from uncontaminated soils (As (shoot 0.8-1.2; root <0.8); Pb (shoot <3.2; root 4-9)). Physiological analyses showed a decrease in chlorophylls, anthocyanins, ascorbic acid levels and percentage of glutathione in shoots of C. monspeliensis collected in contaminated areas compared to the plants growing on uncontaminated soils. The decrease in anthocyanins is correlated with the content of Cd and Zn in plants shoots. A negative correlation was observed between carotenoid contents and Cd concentration in shoots in both mine areas. Arsenic and Cd concentrations were correlated positively with an increase of glutathione in plants grown on mine soils. Moreover, high concentrations of metals in mine soils triggered defence mechanisms against oxidative stress, in the form of increased antioxidative enzyme activity. Therefore, these results reveal that C. monspeliensis is a species adapted to unfavourable environments with high concentrations of metal(loid)s, adjusting its tolerance mechanisms at the metabolic and physiological levels.

Comparative Environmental Performance of Two-Diesel-Fuel Oxygenates: Dibutyl Maleate (DBM) and Triproplyene Glycol Monomethyl Ether (TGME)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Layton, D.W.; Marchetti, A.A.

2001-10-01

Many studies have shown that the addition of oxygen bearing compounds to diesel fuel can significantly reduce particulate emissions. To assist in the evaluation of the environmental performance of diesel-fuel oxygenates, we have implemented a suite of diagnostic models for simulating the transport of compounds released to air, water, and soils/groundwater as well as regional landscapes. As a means of studying the comparative performance of DBM and TGME, we conducted a series of simulations for selected environmental media. Benzene and methyl tertiary butyl ether (MTBE) were also addressed because they represent benchmark fuel-related compounds that have been the subject ofmore » extensive environmental measurements and modeling. The simulations showed that DBM and TGME are less mobile in soil because of reduced vapor-phase transport and increased retention on soil particles. The key distinction between these two oxygenates is that DBM is predicted to have a greater potential than TGME for aerobic biodegradation, based on chemical structure.« less

Microbial transformations of azaarenes in creosite-contaminated soil and ground water: Laboratory and field studies

USGS Publications Warehouse

Pereira, W.E.; Rostad, C.E.; Updegraff, D.M.; Bennett, J.L.

1988-01-01

Azaarenes or aromatic nitrogen heterocycles are a class of compounds found in wood-preservative wastes containing creosote. The fate and movement of these compounds in contaminated aquifers is not well understood. Water-quality studies in an aquifer contaminated with creosote near Pensacola, Florida, indicated that ground water was contaminated with several azaarenes and their oxygenated and alkylated derivatives, suggesting that these oxygenated compounds may be products of microbial transformation reactions. Accordingly, laboratory studies were designed to investigate the fate of these compounds. Under aerobic conditions, soil pseudomonads isolated from creosote-contaminated soil converted quinoline to 2(1H)quinoline that subsequently was degraded to unknown products. A methanogenic consortium isolated from an anaerobic sewage digestor, in presence of ground-water and creosote-contaminated soil, converted quinoline, isoquinoline, and 4-methylquinoline to their respective oxygenated analogs. In addition, N-, C-, and O-methylated analogs of oxygenated azaarenes were identified by gas chromatography-mass spectrometry (GC-MS) in aerobic cultures. Under the experimental conditions, 2-methylquinoline was biorefractory. Presence of similar biotransformation products in anaerobic cultures and contaminated ground water from the Pensacola site provided further evidence that these compounds indeed were mivrobial transformation products. Stable isotope labeling studies indicated that the source of the oxygen atom for this hydroxylation reaction under aerobic and anaerobic conditions was water. A mechanism was proposed for this hydroxylation reaction. Whereas parent azaarenes are biodegradable in both anaerobic and aerobic zones, oxygenated and alkylated analogs are more biorefractory and, hence, persistent in anaerobic zones of contaminated aquifers.

Drivers of methane uptake by montane forest soils in the Peruvian Andes

NASA Astrophysics Data System (ADS)

Jones, Sam; Diem, Torsten; Huaraca Quispe, Lidia; Cahuana, Adan; Meir, Patrick; Teh, Yit

2016-04-01

The exchange of methane between the soils of humid tropical forests and the atmosphere is relatively poorly documented. This is particularly true of montane settings where variations between uptake and emission of atmospheric methane have been observed. Whilst most of these ecosystems appear to function as net sinks for atmospheric methane, some act as considerable sources. In regions like the Andes, humid montane forests are extensive and a better understanding of the magnitude and controls on soil-atmosphere methane exchange is required. We report methane fluxes from upper montane cloud forest (2811 - 2962 m asl), lower montane cloud forest (1532 - 1786 m asl), and premontane forest (1070 - 1088 m asl) soils in south-eastern Peru. Between 1000 and 3000 m asl, mean annual air temperature and total annual precipitation decrease from 24 ° C and 5000 mm to 12 ° C and 1700 mm. The study region experiences a pronounced wet season between October and April. Monthly measurements of soil-atmosphere gas exchange, soil moisture, soil temperature, soil oxygen concentration, available ammonium and available nitrate were made from February 2011 in the upper and lower montane cloud forests and July 2011 in the premontane forest to June 2013. These soils acted as sinks for atmospheric methane with mean net fluxes for wet and dry season, respectively, of -2.1 (0.2) and -1.5 (0.1) mg CH4 m-2 d-1 in the upper montane forest; -1.5 (0.2) and -1.4 (0.1) mg CH4 m-2 d-1in the lower montane forest; and -0.3 (0.2) and -0.2 (0.2) mg CH4 m-2 d-1 in the premontane forest. Spatial variations among forest types were related to available nitrate and water-filled pore space suggesting that nitrate inhibition of oxidation or constraints on the diffusional supply of methane to methanotrophic communities may be important controls on methane cycling in these soils. Seasonality in methane exchange, with weaker uptake related to increased water-filled pore space and soil temperature during the wet season, was only apparent in the upper montane forest. Differences in patterns of soil-atmosphere methane exchange and environmental conditions here and in previous studies of similar ecosystems allow us to speculate that the interaction between soil structure and rainfall regimes may help explain observed variability.

Impact of paper mill wastewater on soil properties and crop yield through lysimeter studies.

PubMed

Singh, P K; Ladwani, K; Ladwani, K; Deshbhratar, P B; Ramteke, D S

2013-01-01

Paper and pulp industries produce large quantities of wastewater which can have adverse effects on the receiving water systems. In the present study lysimeters were used and filled with different soils replicating natural soil horizons and provided with a leachate collection system. The physico-chemical characteristics of the soil in each lysimeter and the quality of wastewater before leaching were assessed. Treated wastewater was evaluated for crop irrigation, and was categorized according to the irrigation water class 'Increasing Problem to Severe Problem' with respect to salinity and specific ion toxicity. Sandy loam soils showed 96% chemical oxygen demand (COD) removal while clay loam soils removed 99% of COD, and the colour removal in both the cases was found to be 100%. Application of wastewater resulted in an increase of pH value, ranging from 6.2-7.6; the electrical conductivity (ECe) of saturated extracts was found to be 0.6-1.7 dS m(-1), and exchangeable sodium percentage (ESP) ranged from 7.8-11.1% in soils. Similarly, an increase in the organic carbon, available nitrogen, phosphorus and potash content of soils was observed when irrigated with wastewater. Wastewater irrigation showed increased grain and straw yield of jowar, wheat and moong. These results permit successful utilization of pulp and paper mill wastewater for crop production without damaging the soils.

Biogeochemistry of the rare-earth elements with particular reference to hickory trees

USGS Publications Warehouse

Robinson, W.O.; Bastron, H.; Murata, K.J.

1958-01-01

Hickory trees concentrate the rare-earth elements in their leaves to a phenomenal degree and may contain as much as 2300 p.p.m. of total rare earths based on the dry weight of the leaves. The average proportions of the individual elements (atomic percent of the total rare-earth elements) in the leaves are: Y 36, La 16, Ce 14, Pr 2, Nd 20, Sm 1, Eu 0.7, Gd 3, Tb 0.6, Dy 3, Ho 0.7, Er 2, Tm 0.2, Yb 1, and Lu 0.2. The similarity in the proportions of the rare-earth elements in the leaves and in the exchange complex of the soil on which the hickory trees grow indicates that the trees do not fractionate the rare earths appreciably. The variation of the rare-earth elements in the leaves and soils can be explained generally in terms of the relative abundance of the cerium group and the yttrium group, except for the element cerium. The large fluctuations in the proportion of cerium [Ce/(La + Nd) atomic ratios of 0.16 to 0.86] correlate with oxidation-reduction conditions in the soil profile. The substitution of dilute H2SO3 for dilute HC1 in the determination of available rare-earth elements brings about a large increase in the proportion of cerium that is extracted from an oxygenated subsoil. These relationships strongly suggest that quadrivalent cerium is present in oxygenated subsoil and is less available to plants than the other rare-earth elements that do not undergo such a change in valence. A few parts per billion of rare-earth elements have been detected in two samples of ground water. ?? 1958.

Status of ASD development for Florida specialty crops

USDA-ARS?s Scientific Manuscript database

Anaerobic soil disinfestation (ASD) is a process in which a carbon source (molasses), a nitrogen source (composted broiler litter), and water are added to soil and tarped with an oxygen-impermeable tarp to create conditions conducive for soil bacteria to generate organic acids and deplete the soil o...

Dissipation of phenanthrene and pyrene at the aerobic-anaerobic soil interface: differentiation induced by the rhizosphere of PAH-tolerant and PAH-sensitive rice (Oryza sativa L.) cultivars.

PubMed

He, Yan; Xia, Wen; Li, Xinfeng; Lin, Jiajiang; Wu, Jianjun; Xu, Jianming

2015-03-01

A pot experiment was conducted to reveal the removal of two polycyclic aromatic hydrocarbons (PAHs) (phenanthrene, PHE, and pyrene, PYR) during rice cultivation in a paddy field. The rhizosphere effect on facilitating dissipation of PAHs varied simultaneously as a function of soil properties, PAH types, cultivation time, and genotypes within rice cultivars, with differences performed for PYR but not PHE. Changes in soil PLFA profiles evidenced that the growth of rice roots modified the dominant species within rhizosphere microbial communities and induced a selective enrichment of Gram-negative aerobic bacteria capable of degrading, thereby resulting in the differentiated dissipation of PYR. While the insignificant differences in PHE dissipation might be attributed to its higher solubility and availability under flooded condition that concealed the differences in improvement of bioavailability for microorganisms between rhizosphere and non-rhizosphere, and between both soils and both rice cultivars. Our findings illustrate that the removal of PAHs in paddy soils was more complex relative to those in dryland soils. This was possibly due to the specialty of rice roots for oxygen secretion that provides development of redox heterogeneous microbial habitats at root-soil interface under flooded condition.

Humic Substances in Organic Wastes and their Effects on Amended Soils

NASA Astrophysics Data System (ADS)

Senesi, N.; Ciavatta, C.; Plaza, C.

2009-04-01

Soil humic substances (HS) are universally recognized to play a major role in a wide number of agronomic and environmental processes. For example, soil HS are able to bind mineral particles together, thus promoting a good soil structure, constitute an important source of nutrients for plants and microorganisms, contribute largely to the acid-base buffering capacity of soils, and exert a marked control on the biological availability, physico-chemical behavior, and environmental fate of toxic metal ions and xenobiotics. For these reasons, the knowledge of the short- and long-term effects of organic amendments on the status, quality, and reactivity of indigenous soil HS is of paramount importance. The objective of this presentation is to provide an overview of the chemical and physico-chemical data available in the literature for the evaluation of the effects of organic wastes of various origin and nature used as soil amendments on the composition, structure, and chemical reactivity of native soil HS. In general, HS-like components of organic wastes are typically characterized by a relatively larger presence of aliphatic, amide, and polysaccharide structures, simple structural components of wide molecular heterogeneity, smaller contents of oxygen, acidic functional groups, and organic free radicals, and smaller degrees of aromatic ring polycondensation, polymerization, and humification than native soil HS. Further, with respect to native soil HS, HS-like fractions from organic wastes generally exhibit smaller binding capacities and affinities for metal ions and organic xenobiotics. Appropriate treatment processes of raw organic wastes able to produce environmentally safe and agronomically efficient soil amendments, such as composting, yield HS-like fractions characterized by chemical and physico-chemical features that approach those of native soil HS. In general, aliphatic, polysaccharide, and lignin structures and S- and N-containing groups of the HS-like fractions of organic wastes can be partially incorporated into native soil HS determining modifications at various extents of their composition, structure, and chemistry. The changes occurred in amended soil HS are more evident when untreated organic materials are used. However, with increasing time after land application, the effects observed become less and less apparent with a clear trend to approach the molecular properties typical of native soil HS.

Processing lunar soils for oxygen and other materials

NASA Technical Reports Server (NTRS)

Knudsen, Christian W.; Gibson, Michael A.

1992-01-01

Two types of lunar materials are excellent candidates for lunar oxygen production: ilmenite and silicates such as anorthite. Both are lunar surface minable, occurring in soils, breccias, and basalts. Because silicates are considerably more abundant than ilmenite, they may be preferred as source materials. Depending on the processing method chosen for oxygen production and the feedstock material, various useful metals and bulk materials can be produced as byproducts. Available processing techniques include hydrogen reduction of ilmenite and electrochemical and chemical reductions of silicates. Processes in these categories are generally in preliminary development stages and need significant research and development support to carry them to practical deployment, particularly as a lunar-based operation. The goal of beginning lunar processing operations by 2010 requires that planning and research and development emphasize the simplest processing schemes. However, more complex schemes that now appear to present difficult technical challenges may offer more valuable metal byproducts later. While they require more time and effort to perfect, the more complex or difficult schemes may provide important processing and product improvements with which to extend and elaborate the initial lunar processing facilities. A balanced R&D program should take this into account. The following topics are discussed: (1) ilmenite--semi-continuous process; (2) ilmenite--continuous fluid-bed reduction; (3) utilization of spent ilmenite to produce bulk materials; (4) silicates--electrochemical reduction; and (5) silicates--chemical reduction.

Monte Carlo Simulation of Soil Moisture Effects on Anti-Tank Landmines Detection by Neutron Backscattering Technique

NASA Astrophysics Data System (ADS)

Mowlawi, Ali Asghar; Yazdani, Majed

The detection of landmines using available technologies is a time consuming, expensive, and extremely dangerous job, so that there is a need for technological breakthroughs in this field. One of the safest and most effective technologies to landmine and explosive detection is the neutron backscattering technique. The slowing-down of fast neutrons to the thermal energy is a direct measure of the concentration of hydrogen, one of the main elements present in explosive materials. The elastic scattering of fast neutrons is affected by the strong resonances in the cross-section of the three other elements of explosives: nitrogen, oxygen, and carbon. In this work, Monte Carlo estimations of the soil moisture effects on landmine detection are presented.

The effect of soil type on the bioremediation of petroleum contaminated soils.

PubMed

Haghollahi, Ali; Fazaelipoor, Mohammad Hassan; Schaffie, Mahin

2016-09-15

In this research the bioremediation of four different types of contaminated soils was monitored as a function of time and moisture content. The soils were categorized as sandy soil containing 100% sand (type I), clay soil containing more than 95% clay (type II), coarse grained soil containing 68% gravel and 32% sand (type III), and coarse grained with high clay content containing 40% gravel, 20% sand, and 40% clay (type IV). The initially clean soils were contaminated with gasoil to the concentration of 100 g/kg, and left on the floor for the evaporation of light hydrocarbons. A full factorial experimental design with soil type (four levels), and moisture content (10 and 20%) as the factors was employed. The soils were inoculated with petroleum degrading microorganisms. Soil samples were taken on days 90, 180, and 270, and the residual total petroleum hydrocarbon (TPH) was extracted using soxhlet apparatus. The moisture content of the soils was kept almost constant during the process by intermittent addition of water. The results showed that the efficiency of bioremediation was affected significantly by the soil type (Pvalue < 0.05). The removal percentage was the highest (70%) for the sandy soil with the initial TPH content of 69.62 g/kg, and the lowest for the clay soil (23.5%) with the initial TPH content of 69.70 g/kg. The effect of moisture content on bioremediation was not statistically significant for the investigated levels. The removal percentage in the clay soil was improved to 57% (within a month) in a separate experiment by more frequent mixing of the soil, indicating low availability of oxygen as a reason for low degradation of hydrocarbons in the clay soil. Copyright © 2016 Elsevier Ltd. All rights reserved.

Soil property control of biogeochemical processes beneath two subtropical stormwater infiltration basins.

PubMed

O'Reilly, Andrew M; Wanielista, Martin P; Chang, Ni-Bin; Harris, Willie G; Xuan, Zhemin

2012-01-01

Substantially different biogeochemical processes affecting nitrogen fate and transport were observed beneath two stormwater infiltration basins in north-central Florida. Differences are related to soil textural properties that deeply link hydroclimatic conditions with soil moisture variations in a humid, subtropical climate. During 2008, shallow groundwater beneath the basin with predominantly clayey soils (median, 41% silt+clay) exhibited decreases in dissolved oxygen from 3.8 to 0.1 mg L and decreases in nitrate nitrogen (NO-N) from 2.7 mg L to <0.016 mg L, followed by manganese and iron reduction, sulfate reduction, and methanogenesis. In contrast, beneath the basin with predominantly sandy soils (median, 2% silt+clay), aerobic conditions persisted from 2007 through 2009 (dissolved oxygen, 5.0-7.8 mg L), resulting in NO-N of 1.3 to 3.3 mg L in shallow groundwater. Enrichment of δN and δO of NO combined with water chemistry data indicates denitrification beneath the clayey basin and relatively conservative NO transport beneath the sandy basin. Soil-extractable NO-N was significantly lower and the copper-containing nitrite reductase gene density was significantly higher beneath the clayey basin. Differences in moisture retention capacity between fine- and coarse-textured soils resulted in median volumetric gas-phase contents of 0.04 beneath the clayey basin and 0.19 beneath the sandy basin, inhibiting surface/subsurface oxygen exchange beneath the clayey basin. Results can inform development of soil amendments to maintain elevated moisture content in shallow soils of stormwater infiltration basins, which can be incorporated in improved best management practices to mitigate NO impacts. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Asian Dust Particles Induce Macrophage Inflammatory Responses via Mitogen-Activated Protein Kinase Activation and Reactive Oxygen Species Production

PubMed Central

Higashisaka, Kazuma; Fujimura, Maho; Taira, Mayu; Yoshida, Tokuyuki; Tsunoda, Shin-ichi; Baba, Takashi; Yamaguchi, Nobuyasu; Nabeshi, Hiromi; Yoshikawa, Tomoaki; Nasu, Masao; Tsutsumi, Yasuo

2014-01-01

Asian dust is a springtime meteorological phenomenon that originates in the deserts of China and Mongolia. The dust is carried by prevailing winds across East Asia where it causes serious health problems. Most of the information available on the impact of Asian dust on human health is based on epidemiological investigations, so from a biological standpoint little is known of its effects. To clarify the effects of Asian dust on human health, it is essential to assess inflammatory responses to the dust and to evaluate the involvement of these responses in the pathogenesis or aggravation of disease. Here, we investigated the induction of inflammatory responses by Asian dust particles in macrophages. Treatment with Asian dust particles induced greater production of inflammatory cytokines interleukin-6 and tumor necrosis factor-α (TNF-α) compared with treatment with soil dust. Furthermore, a soil dust sample containing only particles ≤10 μm in diameter provoked a greater inflammatory response than soil dust samples containing particles >10 μm. In addition, Asian dust particles-induced TNF-α production was dependent on endocytosis, the production of reactive oxygen species, and the activation of nuclear factor-κB and mitogen-activated protein kinases. Together, these results suggest that Asian dust particles induce inflammatory disease through the activation of macrophages. PMID:24987712

Phosphorus and groundwater: Establishing links between agricultural use and transport to streams

USGS Publications Warehouse

Domagalski, Joseph L.; Johnson, Henry

2012-01-01

Leaching of applied fertilizer and surface runoff of phosphorus from the soil can contribute to excess growth of algae in downstream water bodies, a condition known as eutrophication. Excessive amounts of algae in eutrophic water bodies can cause large daily changes in the amount of dissolved oxygen in the water because oxygen concentrations tend to be high during daylight hours as a result of photosynthetic activity but then decrease at night. Low concentrations of dissolved oxygen can stress or kill sensitive species living in the water. This study examined concentrations and movement of phosphorus in the soils and groundwater in five agricultural settings across the United States characterized by differences in soil geochemistry, climate, irrigation usage, and cropping systems to assess potential phosphorus movement in the soil and groundwater under common agricultural conditions. The study design included assessment of a variety of agricultural practices, especially cropping patterns and irrigation, so that the factors that contribute to phosphorus movement to groundwater, or sequestration of the phosphorus to soil could be compared and examined. This type of information could potentially be used to formulate best management practices to limit the transport of phosphorus from the agricultural fields.

Microbial responses to chitin and chitosan in oxic and anoxic agricultural soil slurries

NASA Astrophysics Data System (ADS)

Wieczorek, A. S.; Hetz, S. A.; Kolb, S.

2014-02-01

Chitin is the second most abundant biopolymer in terrestrial ecosystems and is subject to microbial degradation. Chitin can be deacetylated to chitosan or can be hydrolyzed to N,N'-diacetylchitobiose and oligomers of N-acetylglucosamine by aerobic and anaerobic microorganisms. Which pathway of chitin hydrolysis is preferred by soil microbial communities has previously been unknown. Supplementation of chitin stimulated microbial activity under oxic and anoxic conditions in agricultural soil slurries, whereas chitosan had no effect. Thus, the soil microbial community likely was more adapted to chitin as a substrate. In addition, this finding suggested that direct hydrolysis of chitin was preferred to the pathway that starts with deacetylation. Chitin was apparently degraded by aerobic respiration, ammonification, and nitrification to carbon dioxide and nitrate under oxic conditions. When oxygen was absent, fermentation products (acetate, butyrate, propionate, hydrogen, carbon dioxide) and ammonia were detected, suggesting that butyric and propionic acid fermentation were along with ammonification likely responsible for apparent anaerobic chitin degradation. In total, 42 different chiA genotypes were detected of which twenty were novel at an amino acid sequence dissimilarity of >50%. Various chiA genotypes responded to chitin supplementation and affiliated with a novel deep-branching bacterial chiA genotype (anoxic conditions), genotypes of Beta- and Gammaproteobacteria (oxic and anoxic conditions), and Planctomycetes (oxic conditions). Thus, this study provides evidence that detected chitinolytic bacteria were catabolically diverse and occupied different ecological niches with regard to oxygen availability enabling chitin degradation under various redox conditions at the level of the community.

Exploring the controls of soil biogeochemistry in a restored coastal wetland using object-oriented computer simulations of uptake kinetics and thermodynamic optimization in batch reactors

NASA Astrophysics Data System (ADS)

Payn, R. A.; Helton, A. M.; Poole, G.; Izurieta, C.; Bernhardt, E. S.; Burgin, A. J.

2012-12-01

Many hypotheses have been proposed to predict patterns of biogeochemical redox reactions based on the availability of electron donors and acceptors and the thermodynamic theory of chemistry. Our objective was to develop a computer model that would allow us to test various alternatives of these hypotheses against data gathered from soil slurry batch reactors, experimental soil perfusion cores, and in situ soil profile observations from the restored Timberlake Wetland in coastal North Carolina, USA. Software requirements to meet this objective included the ability to rapidly develop and compare different hypothetical formulations of kinetic and thermodynamic theory, and the ability to easily change the list of potential biogeochemical reactions used in the optimization scheme. For future work, we also required an object pattern that could easily be coupled with an existing soil hydrologic model. These requirements were met using Network Exchange Objects (NEO), our recently developed object-oriented distributed modeling framework that facilitates simulations of multiple interacting currencies moving through network-based systems. An initial implementation of the object pattern was developed in NEO based on maximizing growth of the microbial community from available dissolved organic carbon. We then used this implementation to build a modeling system for comparing results across multiple simulated batch reactors with varied initial solute concentrations, varied biogeochemical parameters, or varied optimization schemes. Among heterotrophic aerobic and anaerobic reactions, we have found that this model reasonably predicts the use of terminal electron acceptors in simulated batch reactors, where reactions with higher energy yields occur before reactions with lower energy yields. However, among the aerobic reactions, we have also found this model predicts dominance of chemoautotrophs (e.g., nitrifiers) when their electron donor (e.g., ammonium) is abundant, despite the fact that aerobic respiration produces a higher energy yield from the available dissolved oxygen. This suggests that incorporation of an alternative hypothesis, such as a maximum efficiency model, may be necessary to explain an observation of substantial aerobic respiration occurring in the presence of high ammonium and oxygen concentrations. We are parameterizing and testing this model based on results from batch reactor experiments that have treated soil slurries with a full factorial combination of various levels of reactive solutes found in freshwater (e.g., nitrate) and seawater (e.g., sulfate). Initial comparisons suggest that the model may need to account for the biogeochemical reactivity of iron and the potential physical influence of salt to properly describe variability in the biogeochemistry of Timberlake soils. Comparisons of these evolving models with field-derived data from soils will ultimately reveal how thermodynamic theory may be used to explain the evolution of nutrient retention and greenhouse gas emission in the Timberlake Wetland, where nutrient behavior is changing after restoration from agricultural land use and where inputs of brackish water are expected to increase due to sea level rise.

Uses of lunar sulfur

NASA Technical Reports Server (NTRS)

Vaniman, D.; Pettit, D.; Heiken, G.

1992-01-01

Sulfur and sulfur compounds have a wide range of applications for their fluid, electrical, chemical, and biochemical properties. Although known abundances on the Moon are limited (approximately 0.1 percent in mare soils), sulfur is relatively extractable by heating. Coproduction of sulfur during oxygen extraction from ilmenite-rich mare soils could yield sulfur in masses up to 10 percent of the mass of oxygen produced. Sulfur deserves serious consideration as a lunar resource.

Stable oxygen isotope analysis reveal vegetation influence on soil water movement and ecosystem water fluxes in a semi-arid oak woodland

NASA Astrophysics Data System (ADS)

Piayda, Arndt; Dubbert, Maren; Werner, Christiane; Cuntz, Matthias

2015-04-01

Mechanistically disentangling the role and function of vegetation within the hydrological cycle is one of the key questions in the interdisciplinary field of ecohydrology. The presence of vegetation can have various impacts on soil water relations: transpiration of active vegetation causes great water losses, rainfall is intercepted, soil evaporation can be reduced and infiltration, hydraulic redistribution and translatory flow might be altered. In drylands, covering around 40% of the global land surface, the carbon cycle is closely coupled to water availability due to (seasonal) droughts. Specifically savannah type ecosystems, which cover large areas worldwide, are, due to their bi-layered structure, very suitable to study the effects of distinct vegetation types on the ecosystem water cycle. Oxygen isotope signatures (δ18O) have been used to partition ecosystem evapotranspiration (ET ) because of the distinct isotopic compositions of water transpired by leaves relative to soil evaporated vapor. Recent developments in laser spectroscopy enable measurements of δ18O in the vapor phase with high temporal resolution in the field and bear a novel opportunity to trace water movement within the ecosystem. In the present study, the effects of distinct vegetation layers (i.e. trees and herbaceous vegetation) on soil water infiltration and redistribution as well as ecosystem water fluxes in a Mediterranean cork-oak woodland are disentangled. An irrigation experiment was carried out using δ18O labeled water to quantify the distinct effects of trees and herbaceous vegetation on 1) infiltration and redistribution of water in the soil profile and 2) to disentangle the effects of tree cover on the contribution of unproductive soil evaporation and understory transpiration to total ET . First results proof that stable δ18O isotopes measured onsite with laser spectroscopy is a valuable tool to trace water movement in the soil showing a much higher sensitivity than common TDR-type probes. It was possible to track soil water redistribution even beyond zero net water flux measured with TDR probes. Under shaded conditions beneath tree crowns, infiltration of precipitation reaches much deeper depths due to the limited radiation energy input and thus, reduced evaporative losses, compared to open areas between crowns. As a consequence, the isotopic enrichment back to initial conditions (as observed before the artificial precipitation event) was strongly delayed. Despite the higher water availability beneath tree crowns, transpiration of understory plants and soil evaporation rates were reduced compared to the open area due to the lack of energy. However, transpiration could be maintained much longer and at higher rates after the precipitation event then soil evaporation. These first results support previous findings at this site where a clear difference in understory plant community structure was observed. Beneath tree crowns, favorable water conditions enables a higher occurrence of grasses and nitrogen fixing forbs, whereas in between tree crowns drought adapted native species became dominant.

Soil-based treatment of partially treated liquid swine manure.

PubMed

Yang, H; Xiao, J; El-Din, M Gamal; Buchanan, I D; Bromley, D; Ikehata, K

2007-01-01

A soil-column system was tested for the removal of soluble organics and nutrients from partially treated liquid swine manure. The liquid manure was applied to the 900 mm deep (300 mm of local topsoil and 600 mm of local subsoil) soil columns continuously for an eight-week period, and leachate as well as soil samples were analysed. An effective liquid manure application rate of 17 mm d(-1) was determined based on a preliminary liquid manure soil-based treatment experiment. It was found that more than 90% of five-day biochemical oxygen demand, chemical oxygen demand, total Kjeldahl and ammonia nitrogen, and total phosphorus could be effectively removed from the liquid manure by the soil system. Nitrogen contents accumulated in the soil matrix mostly within the 0 to 300 mm depth, while no significant increase was observed in sub soils. Soil analyses indicated the occurrence of nitrification and denitrification in the soil columns. Nitrogen balance showed that about 42% of the applied nitrogen was lost from the system during the liquid manure soil-based treatment experiment, suggesting the emission of ammonia and other gaseous nitrogen generated through nitrification and denitrification. The leachate of the soil treatment system was used to irrigate Bermuda grass. No negative effect of leachate was observed on the plant growth.

Biochar production method and composition therefrom

DOEpatents

Lee, James W; Buchanan, III, Archibald C; Evans, Barbara R; Kidder, Michelle K

2014-04-29

The invention is directed to a method for producing an oxygenated biochar material possessing a cation-exchanging property, wherein a biochar source is reacted with one or more oxygenating compounds in such a manner that the biochar source homogeneously acquires oxygen-containing cation-exchanging groups in an incomplete combustion process. The invention is also directed to oxygenated biochar compositions and soil formulations containing the oxygenated biochar material.

Biochar production method and composition therefrom

DOEpatents

Lee, James W.; Buchanan, III, Archibald C.; Evans, Barbara R.; Kidder, Michelle K.

2013-03-19

The invention is directed to a method for producing an oxygenated biochar material possessing a cation-exchanging property, wherein a biochar source is reacted with one or more oxygenating compounds in such a manner that the biochar source homogeneously acquires oxygen-containing cation-exchanging groups in an incomplete combustion process. The invention is also directed to oxygenated biochar compositions and soil formulations containing the oxygenated biochar material.

Chlorite dismutases – a heme enzyme family for use in bioremediation and generation of molecular oxygen

PubMed Central

Hofbauer, Stefan; Schaffner, Irene; Furtmüller, Paul G; Obinger, Christian

2014-01-01

Chlorite is a serious environmental concern, as rising concentrations of this harmful anthropogenic compound have been detected in groundwater, drinking water, and soil. Chlorite dismutases (Clds) are therefore important molecules in bioremediation as Clds catalyze the degradation of chlorite to chloride and molecular oxygen. Clds are heme b-containing oxidoreductases present in numerous bacterial and archaeal phyla. This review presents the phylogeny of functional Clds and Cld-like proteins, and demonstrates the close relationship of this novel enzyme family to the recently discovered dye-decolorizing peroxidases. The available X-ray structures, biophysical and enzymatic properties, as well as a proposed reaction mechanism, are presented and critically discussed. Open questions about structure-function relationships are addressed, including the nature of the catalytically relevant redox and reaction intermediates and the mechanism of inactivation of Clds during turnover. Based on analysis of currently available data, chlorite dismutase from “Candidatus Nitrospira defluvii” is suggested as a model Cld for future application in biotechnology and bioremediation. Additionally, Clds can be used in various applications as local generators of molecular oxygen, a reactivity already exploited by microbes that must perform aerobic metabolic pathways in the absence of molecular oxygen. For biotechnologists in the field of chemical engineering and bioremediation, this review provides the biochemical and biophysical background of the Cld enzyme family as well as critically assesses Cld's technological potential. PMID:24519858

Programmatic Life Cycle Environmental Assessment for Smoke/Obscurants. Volume 2. Red, White, and Plasticized White Phosphorus

DTIC Science & Technology

1983-07-01

data on toxic effects of unreacted P4 on soil systems are available. (3) Aquatic systems . Aquatic toxicity data on WP are presented in section IV.f...elevated phosphorus levels in aquatic systems will cause adverse effects . Phosphoric acids may lower water pH in systems with low water hardness. A pH...eutrophication of the system , will cause detrimental effects on the fish population. Fish kills can occur over the winter due to low oxygen levels. The

Improved Enzyme Kinetic Model for Nitrification in Soils Amended with Ammonium. I. Literature Review,

DTIC Science & Technology

1980-01-01

ciple we can use these data in nitrification models, ON NITRIFICATION provided the concentration of oxygen in soil solution is known. This, however, is...Soil nitrifiers 30 0.8 (mixed culture) *As determined by Shah (1975). than within bulk soil solution , and McLaren and Packer these soils. The spatial...concentration concentration of 70 mg/l since this is the reported in soil solution depends on a soil-specific equilibrium influent concentration

Effect of Low Temperature Thermal Treatment on Soils Contaminated with Pentachlorophenol and Environmentally Persistent Free Radicals

PubMed Central

dela Cruz, Albert Leo N.; Cook, Robert L.; Lomnicki, Slawomir M.; Dellinger, Barry

2012-01-01

The effect of low temperature thermal treatment on soils from a former Superfund wood-treating site contaminated with pentachlorophenol (PCP) and the environmentally persistent free radical (EPFR), pentachlorophenoxyl, was determined. The pentachlorophenoxyl EPFRs’ and the PCP molecules’ chemical behavior were simultaneously monitored at temperatures ranging from 25 °C to 300 °C via electron paramagnetic resonance (EPR) spectroscopy and GC-MS analysis, respectively. Two types of thermal treatment were employed: a closed heating (oxygen-starved condition) where the soil was heated under vacuum and an open heating system (oxygen-rich conditions), where the soil was heated in ambient air. EPR analyses for closed heating indicated the EPFR concentration was 2–12 × 1018 spins/g of soil, with a g-factor and linewidth (ΔHp-p) of 2.00311 – 2.00323 and 4.190 – 5.472 Gauss, respectively. EPR analyses for the open heating soils revealed a slightly broader and weaker radical signal, with a concentration of 1–10 × 1018 spins/g of soil, g-factor of 2.00327 – 2.00341, and ΔHp-p of 5.209 – 6.721 Gauss. This suggested the open heating resulted in the formation of a more oxygen-centered structure of the pentachlorophenoxyl radical or additional, similar radicals. The EPFR concentration peaked at 10 × 1018 spins/g of soil at 100 °C for open heating and 12 × 1018 spins/g at 75 °C for closed heating. The half-lives of the EPFRs were 2 – 24 days at room temperature in ambient air. These results suggest low temperature treatment of soils contaminated with PCP can convert the PCP to potentially more toxic pentachlorophenoxyl EPFRs, which may persist in the environment long enough for human exposure. PMID:22548284

Soil property control of biogeochemical processes beneath two subtropical stormwater infiltration basins

USGS Publications Warehouse

O'Reilly, Andrew M.; Wanielista, Martin P.; Chang, Ni-Bin; Harris, Willie G.; Xuan, Zhemin

2012-01-01

Substantially different biogeochemical processes affecting nitrogen fate and transport were observed beneath two stormwater infiltration basins in north-central Florida. Differences are related to soil textural properties that deeply link hydroclimatic conditions with soil moisture variations in a humid, subtropical climate. During 2008, shallow groundwater beneath the basin with predominantly clayey soils (median, 41% silt+clay) exhibited decreases in dissolved oxygen from 3.8 to 0.1 mg L-1 and decreases in nitrate nitrogen (NO3-–N) from 2.7 mg L-1 to -1, followed by manganese and iron reduction, sulfate reduction, and methanogenesis. In contrast, beneath the basin with predominantly sandy soils (median, 2% silt+clay), aerobic conditions persisted from 2007 through 2009 (dissolved oxygen, 5.0–7.8 mg L-1), resulting in NO3-–N of 1.3 to 3.3 mg L-1 in shallow groundwater. Enrichment of d15N and d18O of NO3- combined with water chemistry data indicates denitrification beneath the clayey basin and relatively conservative NO3- transport beneath the sandy basin. Soil-extractable NO3-–N was significantly lower and the copper-containing nitrite reductase gene density was significantly higher beneath the clayey basin. Differences in moisture retention capacity between fine- and coarse-textured soils resulted in median volumetric gas-phase contents of 0.04 beneath the clayey basin and 0.19 beneath the sandy basin, inhibiting surface/subsurface oxygen exchange beneath the clayey basin. Results can inform development of soil amendments to maintain elevated moisture content in shallow soils of stormwater infiltration basins, which can be incorporated in improved best management practices to mitigate NO3- impacts.

Use of isotopically labeled fertilizer to trace nitrogen fertilizer contributions to surface, soil, and ground water

USGS Publications Warehouse

Wilkison, D.H.; Blevins, D.W.; Silva, S.R.

2000-01-01

The fate and transport of a single N fertilizer application through plants, soil, runoff, and the unsaturated and saturated zones was determined for four years at a field site under continuous corn (Zea mays L.) management. Claypan soils, which underlie the site, were hypothesized to restrict the movement of agrichemicals from the soil surface to ground water. However, N fertilizer moved rapidly through preferential flow paths in the soil and into the underlying glacial till aquifer. Most N transport occurred during the fall and winter when crops were not available to use excess N. Forty months after application, 33 percent of the fertilizer had been removed by grain harvests, 30 percent had been transpired to the atmosphere, and 33 percent had migrated to ground water. Although runoff volumes were 50 percent greater than infiltration, less than 2 percent of the fertilizer was lost to runoff. Small measured denitrification rates and large measured dissolved oxygen concentrations in ground water favor the long-term stability of NO3-1 in ground water. Successive fertilizer applications, in areas that lack the ability to moderate N concentrations through consumptive N reactions, risk the potential of N-saturated ecosystems.

Producing propellants from water in lunar soil using solar lasers

NASA Astrophysics Data System (ADS)

de Morais Mendonca Teles, Antonio

The exploration of the Solar System is directly related to the efficiency of engines designed to explore it, and consequently, to the propulsion techniques, materials and propellants for those engines. With the present day propulsion techniques it is necessary great quantities of propellants to impulse a manned spacecraft to Mars and beyond in the Solar System, which makes these operations financially very expensive because of the costs involved in launching it from planet Earth, due to its high gravity field strength. To solve this problem, it is needed a planetary place with smaller gravity field strength, near to the Earth and with great quantities of substances at the surface necessary for the in-situ production of propellants for spacecrafts. The only place available is Earth's natural satellite the Moon. So, here in this paper, I propose the creation of a Lunar Propellant Manufacturer. It is a robot-spacecraft which can be launched from Earth using an Energia Rocket, and to land on the Moon in an area (principally near to the north pole where it was discovered water molecules ice recently) with great quantities of oxygen and hydrogen (propellants) in the silicate soil, previously observed and mapped by spacecrafts in lunar orbit, for the extraction of those molecules from the soil and the in-situ production of the necessary propellants. The Lunar Propellant Manufacturer (LPM) spacecraft consists of: 1) a landing system with four legs (extendable) and rovers -when the spacecraft touches down, the legs retract in order that two apparatuses, analogue to tractor's wheeled belts parallel sided and below the spacecraft, can touch firmly the ground -it will be necessary for the displacement of the spacecraft to new areas with richer propellants content, when the early place has already exhausted in propellants; 2) a digging machine -a long, resistant extendable arm with an excavator hand, in the outer part of the spacecraft -it will extend itself to the ground, collect soil and retract itself to put the material on the top of the spacecraft inside a hole which will be opened; 3) an infrared laser based on solar electrical energy -a "solar laser" -when the soil be inside the chamber inside the spacecraft, the solar laser will be turned on and it will strike against the soil, heating it up, and release all oxygen and hydrogen from it. The oxygen and hydrogen molecules will be separated from the rest of the material by a mass spectrometer and they will be liquefied by thermal and pressure internal control sub-systems of the spacecraft, and pumped to vessels in a way similar to a micro-industrial line production process; the vessels with the propellants will be then ready to be taken by astronauts, from a small door outside the LPM. The shape of this spacecraft must be conical in order to not unbalance it during the landing and roving maneuvers and soil cargoes, and it will be shielded externally from heat and radiation from the Sun, and micrometeoroids, to prevent the internal thermal conduction and electronic operations from damaging. A solar array externally deployed can produce 44 KW of electric soil energy for the production process. This miniature chemical-processing plant can possibly have an output of 100 Kg of liquid oxygen and 200 Kg of liquid hydrogen per day. Telecommunications with Earth will provide the onboard computer courses for roving to new mapped areas with richer propellants content in the soil. The spacecraft can weight approximately 6,000 Kg (at launch time from Earth). It will be necessary two LPMs for providing all the liquid oxygen and hydrogen needed to supply spacecrafts next to a semi-permanent small manned lunar base. With the Lunar Propellant Manufacturer it will solve the problem of not-expensively producing great quantities of propellants for a manned spacecraft to explore Mars and beyond In the Solar System.

STABLE ISOTOPES AS INDICATORS OF SOIL WATER DYNAMICS IN WATERSHEDS

EPA Science Inventory

Stream water quality and quantity depend on discharge rates of water and nutrients from soils. However, soil-water storage is very dynamic and strongly influenced by plants. We analyzed stable isotopes of oxygen and hydrogen to quantify spatial and temporal changes in evaporati...

Assessments of the efficacy of a long-term application of a phytoremediation system using hybrid poplar trees at former oil tank farm sites.

PubMed

El-Gendy, Ahmed S; Svingos, Sotero; Brice, Donald; Garretson, Joel H; Schnoor, Jerald

2009-05-01

A poplar tree-phytoremediation system was installed at former refinery and tank farm sites in Cabin Creek, West Virginia, to cleanup petroleum-contaminated-soils and groundwater. Groundwater and soils in both sites were sampled and analyzed on a regular basis to monitor changes in contaminant concentration since 1999. The concentration of benzene, toluene, ethylbenzene, xylene, and gasoline range organics (GRO) decreased an average of 81%, 90%, 67%, 78%, and 82%, respectively, in the lower soil horizons and 34%, 84%, 12%, 19%, and 59%, respectively, in groundwater. In addition, concentrations of oxygen, methane, and carbon dioxide in soil gas demonstrated that tree roots dewatered soils and allowed penetration of oxygen deep into the soil profile, creating necessary conditions for rhizosphere bioremediation. Although required clean-up time can limit phytoremediation, it has proven to be a cost-effective strategy for site improvement if imminent pathways for human exposure and risk are not an issue.

Bioremediation of PAH-contamined soils: Consequences on formation and degradation of polar-polycyclic aromatic compounds and microbial community abundance.

PubMed

Biache, Coralie; Ouali, Salma; Cébron, Aurélie; Lorgeoux, Catherine; Colombano, Stéfan; Faure, Pierre

2017-05-05

A bioslurry batch experiment was carried out over five months on three polycyclic aromatic compound (PAC) contaminated soils to study the PAC (PAH and polar-PAC) behavior during soil incubation and to evaluate the impact of PAC contamination on the abundance of microbial communities and functional PAH-degrading populations. Organic matter characteristics and reactivity, assessed through solvent extractable organic matter and PAC contents, and soil organic matter mineralization were monitored during 5 months. Total bacteria and fungi, and PAH-ring hydroxylating dioxygenase genes were quantified. Results showed that PAHs and polar-PACs were degraded with different degradation dynamics. Differences in degradation rates were observed among the three soils depending on PAH distribution and availability. Overall, low molecular weight compounds were preferentially degraded. Degradation selectivity between isomers and structurally similar compounds was observed which could be used to check the efficiency of bioremediation processes. Bacterial communities were dominant over fungi and were most likely responsible for PAC degradation. Abundance of PAH-degrading bacteria increased during incubations, but their proportion in the bacterial communities tended to decrease. The accumulation of some oxygenated-PACs during the bioslurry experiment underlines the necessity to monitor these compounds during application of remediation treatment on PAH contaminated soils. Copyright © 2017 Elsevier B.V. All rights reserved.

Root-Zone Redox Dynamics - In Search for the Cause of Damage to Treated-Wastewater Irrigated Orchards in Clay Soils

NASA Astrophysics Data System (ADS)

Yalin, David; Shenker, Moshe; Schwartz, Amnon; Assouline, Shmuel; Tarchitzky, Jorge

2016-04-01

Treated wastewater (TW) has become a common source of water for agriculture. However recent findings raise concern regarding its use: a marked decrease (up to 40%) in yield appeared in orchards irrigated with TW compared with fresh water (FW) irrigated orchards. These detrimental effects appeared predominantly in orchards cultivated in clay soils. The association of the damage with clay soils rather than sandy soils led us to hypothesize that the damage is linked to soil aeration problems. We suspected that in clay soils, high sodium adsorption ratio (SAR) and high levels of organic material, both typical of TW, may jointly lead to an extreme decrease in soil oxygen levels, so as to shift soil reduction-oxidation (redox) state down to levels that are known to damage plants. Two-year continuous measurement of redox potential, pH, water tension, and oxygen were conducted in the root-zone (20-35 cm depth) of avocado trees planted in clay soil and irrigated with either TW or FW. Soil solution composition was sampled periodically in-situ and mineral composition was sampled in tree leaves and woody organs biannually. In dry periods the pe+pH values indicated oxic conditions (pe+pH>14), and the fluctuations in redox values were small in both TW and FW plots. Decreases in soil water tension following irrigation or rain were followed by drops in soil oxygen and pe+pH values. TW irrigated plots had significantly lower minimum pe+pH values compared with FW-irrigated plots, the most significant differences occurred during the irrigation season rather than the rain season. A linear correlation appeared between irrigation volume and reduction severity in TW-irrigated plots, but not in the FW plots, indicating a direct link to the irrigation regime in TW-irrigated plots. The minimum pe+pH values measured in the TW plots are indicative of suboxic conditions (9

Comparison of the effectiveness of soil heating prior or during in situ chemical oxidation (ISCO) of aged PAH-contaminated soils.

PubMed

Ranc, Bérénice; Faure, Pierre; Croze, Véronique; Lorgeoux, Catherine; Simonnot, Marie-Odile

2017-04-01

Thermal treatments prior or during chemical oxidation of aged polycyclic aromatic hydrocarbon (PAH)-contaminated soils have already shown their ability to increase oxidation effectiveness. However, they were never compared on the same soil. Furthermore, oxygenated polycyclic aromatic hydrocarbons (O-PACs), by-products of PAH oxidation which may be more toxic and mobile than the parent PAHs, were very little monitored. In this study, two aged PAH-contaminated soils were heated prior (60 or 90 °C under Ar for 1 week) or during oxidation (60 °C for 1 week) with permanganate and persulfate, and 11 O-PACs were monitored in addition to the 16 US Environmental Protection Agency (US EPA) PAHs. Oxidant doses were based on the stoichiometric oxidant demand of the extractable organic fraction of soils by using organic solvents, which is more representative of the actual contamination than only the 16 US EPA PAHs. Higher temperatures actually resulted in more pollutant degradation. Two treatments were about three times more effective than the others: soil heating to 60 °C during persulfate oxidation and soil preheating to 90 °C followed by permanganate oxidation. The results of this study showed that persulfate effectiveness was largely due to its thermal activation, whereas permanganate was more sensitive to PAH availability than persulfate. The technical feasibility of these two treatments will soon be field-tested in the unsaturated zone of one of the studied aged PAH-contaminated soils.

Mechanistic modeling of microbial interactions at pore to profile scale resolve methane emission dynamics from permafrost soil

NASA Astrophysics Data System (ADS)

Ebrahimi, Ali; Or, Dani

2017-05-01

The sensitivity of polar regions to raising global temperatures is reflected in rapidly changing hydrological processes associated with pronounced seasonal thawing of permafrost soil and increased biological activity. Of particular concern is the potential release of large amounts of soil carbon and stimulation of other soil-borne greenhouse gas emissions such as methane. Soil methanotrophic and methanogenic microbial communities rapidly adjust their activity and spatial organization in response to permafrost thawing and other environmental factors. Soil structural elements such as aggregates and layering affect oxygen and nutrient diffusion processes thereby contributing to methanogenic activity within temporal anoxic niches (hot spots). We developed a mechanistic individual-based model to quantify microbial activity dynamics in soil pore networks considering transport processes and enzymatic activity associated with methane production in soil. The model was upscaled from single aggregates to the soil profile where freezing/thawing provides macroscopic boundary conditions for microbial activity at different soil depths. The model distinguishes microbial activity in aerate bulk soil from aggregates (or submerged profile) for resolving methane production and oxidation rates. Methane transport pathways by diffusion and ebullition of bubbles vary with hydration dynamics. The model links seasonal thermal and hydrologic dynamics with evolution of microbial community composition and function affecting net methane emissions in good agreement with experimental data. The mechanistic model enables systematic evaluation of key controlling factors in thawing permafrost and microbial response (e.g., nutrient availability and enzyme activity) on long-term methane emissions and carbon decomposition rates in the rapidly changing polar regions.

Effects of Biochar Feedstock and Pyrolysis Temperature on Growth of Corn, Soybean, Lettuce and Carrot

EPA Science Inventory

Biochar, the carbon-rich material remaining after pyrolysis (low oxygen) of cellulosic feedstocks, has the potential as a soil amendment to sequester carbon, improve soil water-holding capacity, and increase nutrient retention thereby enhancing soil conditions to benefit plant gr...

Oxygen extraction from lunar soil by fluorination

NASA Technical Reports Server (NTRS)

Seboldt, W.; Lingner, S.; Hoernes, S.; Grimmeisen, W.

1991-01-01

Mining and processing of lunar material could possibly lead to more cost-efficient scenarios for permanent presence of man in space and on the Moon. Production of oxygen for use as propellant seems especially important. Different candidate processes for oxygen-extraction from lunar soil were proposed, of which the reduction of ilmenite by hydrogen was studied most. This process, however, needs the concentration of ilmenite from lunar regolith to a large extent and releases oxygen only with low efficiency. Another possibility - the fluorination method - which works with lunar bulk material as feedstock is discussed. Liberation of oxygen from silicate or oxide materials by fluorination methods has been applied in geoscience since the early sixties. The fact that even at moderate temperatures 98 to 100 percent yields can be attained, suggests that fluorination of lunar regolith could be an effective way of propellant production. Lunar soil contains about 50 percent oxygen by weight which is gained nearly completely through this process as O2 gas. The second-most element Si is liberated as gaseous SiF4. It could be used for production of Si-metal and fluorine-recycling. All other main elements of lunar soil will be converted into solid fluorides which also can be used for metal-production and fluorine-recycling. Preliminary results of small scale experiments with different materials are discussed, giving information on specific oxygen-yields and amounts of by-products as functions of temperature. These experiments were performed with an already existing fluorine extraction and collection device at the University of Bonn, normally used for determination of oxygen-isotopic abundances. Optimum conditions, especially concerning energy consumption, are investigated. Extrapolation of the experimental results to large industrial-type plants on the Moon is tried and seems to be promising at first sight. The recycling of the fluorine is, however, crucial for the process. It might be achieved by means of electrolysis. This needs further investigation. The technical problem of transport and handling of the toxic and corrosive fluorine seems to be solvable and could be done by inert storage vessels.

Unusual Reactivity of the Martian Soil: Oxygen Release Upon Humidification

NASA Technical Reports Server (NTRS)

Yen, A. S.

2002-01-01

Recent lab results show that oxygen evolves from superoxide-coated mineral grains upon exposure to water vapor. This observation is additional support of the hypothesis that UV-generated O2 is responsible for the reactivity of the martian soil. Discussion of current NASA research opportunities, status of various programs within the Solar System Exploration Division, and employment opportunities within NASA Headquarters to support these programs. Additional information is contained in the original extended abstract.

Biological oxygen demand in soils and hydrogel compositions for plant protection of the rhizosphere

NASA Astrophysics Data System (ADS)

Valentinovich Smagin, Andrey

2018-02-01

Potential biological activity of mineral and organogenic samples from light-textured sod-podzolic soils as well as of hydrogel compositions for protecting the root layer from pathogenic microflora and unfavorable edaphic factors were studied in laboratory conditions by oxygen consumption under the optimal hydrothermic conditions with portable gas analyzers. We have conducted ecological standardization of biological activity and organic matter destruction estimated by biological oxygen demand (BOD) in the widespread sandy soils. The primary outcome was the scale of gradations of biological oxygen uptake in soils with a range of quantities of potential biological activity from “very low” (<2 g·m-3·hour-1) to “extremely high” (>140 g·m-3·hour-1), obtained on the basis of statistical processing of data array 1308 measurements. Acrylic polymer hydrogels had BOD = 0.2-2 g·m-3·hour-1, which corresponded to the periods of their half-lives from 0.2±0.1 to 6.8± 4.5 years, or relatively low resistance to biodestruction. In contrast to the pure gels, hydrogel compositions for rhizosphere based on ionic and colloidal silver showed low biological activity (BOD=0.01-0.2 g·m-3· hour-1) and, accordingly, significant resistance to biodegradation with half-lives from 5 to 70 years and above.

HYDRAULIC FRACTURING TO IMPROVE NUTRIENT AND OXYGEN DELIVERY FOR IN SITU BIORECLAMATION

EPA Science Inventory

The in situ delivery of nutrients and oxygen in soil is a serious problem in implementing in situ biodegradation. Current technology requires ideal site conditions to provide the remediating organisms with the nutrients and oxygen required for their metabolism, but...

In situ formation of magnetite reactive barriers in soil for waste stabilization

DOEpatents

Moore, Robert C.

2003-01-01

Reactive barriers containing magnetite and methods for making magnetite reactive barriers in situ in soil for sequestering soil contaminants including actinides and heavy metals, organic materials, iodine and technetium are disclosed. According to one embodiment, a two-step reagent introduction into soil takes place. In the first step, free oxygen is removed from the soil by separately injecting into the soil aqueous solutions of iron (II) salt, for example FeCl.sub.2, and base, for example NaOH or NH.sub.3 in about a 1:1 volume ratio. Then, in the second step, similar reagents are injected a second time (however, according to about a 1:2 volume ratio, iron to salt) to form magnetite. The magnetite formation is facilitated, in part, due to slow intrusion of oxygen into the soil from the surface. The invention techniques are suited to injection of reagents into soil in proximity to a contamination plume or source allowing in situ formation of the reactive barrier at the location of waste or hazardous material. Mixing of reagents to form. precipitate is mediated and enhanced through movement of reagents in soil as a result of phenomena including capillary action, movement of groundwater, soil washing and reagent injection pressure.

Development of natural treatment system consisting of black soil and Kentucky bluegrass for the post-treatment of anaerobically digested strong wastewater.

PubMed

Chen, Xiaochen; Fukushi, Kensuke

2016-03-01

To develop a sound post-treatment process for anaerobically-digested strong wastewater, a novel natural treatment system comprising two units is put forward. The first unit, a trickling filter, provides for further reduction of biochemical oxygen demand and adjustable nitrification. The subsequent soil-plant unit aims at removing and recovering the nutrients nitrogen (N), phosphorus (P) and potassium (K). As a lab-scale feasibility study, a soil column test was conducted, in which black soil and valuable Kentucky bluegrass were integrated to treat artificial nutrient-enriched wastewater. After a long-term operation, the nitrification function was well established in the top layers, despite the need for an improved denitrification process prior to discharge. P and K were retained by the soil through distinct mechanisms. Since they either partially or totally remained in plant-available forms in the soil, indirect nutrient reuse could be achieved. As for Kentucky bluegrass, it displayed better growth status when receiving wastewater, with direct recovery of 8%, 6% and 14% of input N, P and K, respectively. Furthermore, the indispensable role of Kentucky bluegrass for better treatment performance was proved, as it enhanced the cell-specific nitrification potential of the soil nitrifying microorganisms inhabiting the rhizosphere. After further upgrade, the proposed system is expected to become a new solution for strong wastewater pollution. Copyright © 2015. Published by Elsevier B.V.

Identification of aerenchyma formation-related QTL in barley that can be effective in breeding for waterlogging tolerance.

PubMed

Zhang, Xuechen; Zhou, Gaofeng; Shabala, Sergey; Koutoulis, Anthony; Shabala, Lana; Johnson, Peter; Li, Chengdao; Zhou, Meixue

2016-06-01

Aerenchyma formation after 7 days of waterlogging in commercial potting mixture can be a reliable, fast, and widely utilized approach for the selection of waterlogging tolerant barley genotypes. One major QTL for aerenchyma formation after 7 days of waterlogging treatment was identified and the newly developed markers explained 44 % of the phenotypic variance. This QTL can now be effectively used in barley breeding programs. Waterlogging is one of the important limiting conditions for crop yield and productivity. The main feature of waterlogged soils is oxygen deprivation, due to slow gas diffusion in water. Decreased oxygen content in waterlogged soils leads to the oxygen deficiency in plant tissues, resulting in reduced energy availability for plants. Rapidly induced aerenchyma formation is critical to maintaining adequate oxygen supply and overall waterlogging tolerance in barley. In this study, we have proved that quantifying aerenchyma formation after 7 days of waterlogging in commercial potting mixture can be a reliable, fast, and widely utilised approach for the selection of waterlogging tolerant barley genotypes, which is supported by measurements of redox potential (an indicator of anaerobic conditions). This protocol was also used to identify quantitative trait loci (QTL) in a doubled haploid population of barley from the cross between Yerong (tolerant) and Franklin (sensitive) genotypes. The QTL for aerenchyma formation and root porosity were at the same location as the waterlogging tolerance QTL. Seven new markers were developed and added onto this region on chromosome 4H. One major QTL for aerenchyma formation after 7 days waterlogging treatment explained 44.0 % of the phenotypic variance. This successful QTL for aerenchyma formation can be effectively used in the marker assisted selection to improve waterlogging tolerance in barley.

Effects of soil oxidation-reduction conditions on internal oxygen transport, root aeration, and growth of wetland plants

Treesearch

S.R. Pezeshki; R.D. DeLaune

2000-01-01

Characterization of hydric soils and the relationship between soil oxidation-reduction processes and wetland plant distribution are critical to the identification and delineation of wetlands and to our understanding of soil processes and plant functioning in wetland ecosystems. However, the information on the relationship between flood response of wetland plants and...

Evaluation of food processing wastewater loading characteristics on metal mobilization within the soil.

PubMed

Julien, Ryan; Safferman, Steven

2015-01-01

Wastewater generated during food processing is commonly treated using land-application systems which primarily rely on soil microbes to transform nutrients and organic compounds into benign byproducts. Naturally occurring metals in the soil may be chemically reduced via microbially mediated oxidation-reduction reactions as oxygen becomes depleted. Some metals such as manganese and iron become water soluble when chemically reduced, leading to groundwater contamination. Alternatively, metals within the wastewater may not become assimilated into the soil and leach into the groundwater if the environment is not sufficiently oxidizing. A lab-scale column study was conducted to investigate the impacts of wastewater loading values on metal mobilization within the soil. Oxygen content and volumetric water data were collected via soil sensors for the duration of the study. The pH, chemical oxygen demand, manganese, and iron concentrations in the influent and effluent water from each column were measured. Average organic loading and organic loading per dose were shown to have statistically significant impacts using Spearman's Rank Correlation Coefficient on effluent water quality. The Hydraulic resting period qualitatively appeared to have impacts on effluent water quality. This study verifies that excessive organic loading of land application systems causes mobilization of naturally occurring metals and prevents those added in the wastewater from becoming immobilized, resulting in ineffective wastewater treatment. Results also indicate the need to consider the organic dose load and hydraulic resting period in the treatment system design. Findings from this study demonstrate waste application twice daily may encourage soil aeration and allow for increased organic loading while limiting the mobilization of metals already in the soil and those being applied.

Carbonic anhydrase distribution across organisms and environments: genomic predictors for soil enzymatic fluxes of carbon cycle tracers δ18O and COS

NASA Astrophysics Data System (ADS)

Meredith, L. K.; Singer, E.

2016-12-01

Carbonyl sulfide (COS) and the oxygen isotope composition (δ18O) of CO2 are potential tools for differentiating the contributions of photosynthesis and respiration to the balance of global carbon cycling. These processes are coupled at the leaf level via the enzyme carbonic anhydrase (CA), which hydrolyzes CO2 in the first biochemical step of the photosynthetic pathway (CO2 + H2O ⇌ HCO3- + H+) and correspondingly structural analogue COS (COS + H2O → CO2 + H2S). CA also accelerates the exchange of oxygen isotopes between CO2 and H2O leading to a distinct isotopic imprint. The biogeochemical cycles of these tracers include significant, yet poorly characterized soil processes that challenge their utility for probing the carbon cycle. In soils, microbial CA also hydrolyze COS and accelerate O isotope exchange between CO2 and soil water. Genomic predictors of microbial CA activity may help account and predict for these soil fluxes. Using a bioinformatics approach, we assess the distribution of the six known CA classes (α, β, γ, δ, η, ζ) in organisms ranging from fungi and plants to archaea and bacteria, and ask whether CA diversity is linked to soil microbial diversity. We survey the diversity and relative abundance of CA in a wide variety of environments and estimate the sensitivity of CA to biome and land use. Finally, we compare the CA distribution in soils to measurements (oxygen isotope and COS fluxes) and models of CA activity to develop genomic predictors for CA activity. This work provides the first survey of CA in soils, a step towards understanding the significant role of CA in microbial ecology and microbe-mediated biogeochemical cycles.

Keeping your forest soils healthy and productive.

Treesearch

Ole T. Helgerson; Richard E. Miller

2008-01-01

Soils are an integral structural part of your woodland and the larger forest ecosystem. Important forest soil functions include:Providing water, nutrients, and physical support for the growth of trees and other forest plantsAllowing an exchange of carbon dioxide, oxygen, and other gasses that affect root growth and...

Diminished Wastewater Treatment: Evaluation of Septic System Performance Under a Climate Change Scenario

NASA Astrophysics Data System (ADS)

Cooper, J.; Loomis, G.; Kalen, D.; Boving, T. B.; Morales, I.; Amador, J.

2015-12-01

The effects of climate change are expected to reduce the ability of soil-based onsite wastewater treatment systems (OWTS), to treat domestic wastewater. In the northeastern U.S., the projected increase in atmospheric temperature, elevation of water tables from rising sea levels, and heightened precipitation will reduce the volume of unsaturated soil and oxygen available for treatment. Incomplete removal of contaminants may lead to transport of pathogens, nutrients, and biochemical oxygen demand (BOD) to groundwater, increasing the risk to public health and likelihood of eutrophying aquatic ecosystems. Advanced OWTS, which include pre-treatment steps and provide unsaturated drainfields of greater volume relative to conventional OWTS, are expected to be more resilient to climate change. We used intact soil mesocosms to quantify water quality functions for two advanced shallow narrow drainfield types and a conventional drainfield under a current climate scenario and a moderate climate change scenario of 30 cm rise in water table and 5°C increase in soil temperature. While no fecal coliform bacteria (FCB) was released under the current climate scenario, up to 109 CFU FCB/mL (conventional) and up to 20 CFU FCB/mL (shallow narrow) were released under the climate change scenario. Total P removal rates dropped from 100% to 54% (conventional) and 71% (shallow narrow) under the climate change scenario. Total N removal averaged 17% under both climate scenarios in the conventional, but dropped from 5.4% to 0% in the shallow narrow under the climate change scenario, with additional leaching of N in excess of inputs indicating release of previously held N. No significant difference was observed between scenarios for BOD removal. The initial data indicate that while advanced OWTS retain more function under the climate change scenario, all three drainfield types experience some diminished treatment capacity.

JSC-1: A new lunar regolith simulant

NASA Technical Reports Server (NTRS)

Mckay, David S.; Carter, James L.; Boles, Walter W.; Allen, Carlton C.; Allton, Judith H.

1993-01-01

Simulants of lunar rocks and soils with appropriate properties, although difficult to produce in some cases, will be essential to meeting the system requirements for lunar exploration. In order to address this need a new lunar regolith simulant, JSC-1, has been developed. JSC-1 is a glass-rich basaltic ash which approximates the bulk chemical composition and mineralogy of some lunar soils. It has been ground to produce a gain size distribution approximating that of lunar regolith samples. The simulant is available in large quantities (greater than 2000 lb; 907 kg). JSC-1 was produced specifically for large- and medium-scale engineering studies in support of future human activities on the Moon. Such studies include material handling, construction, excavation, and transportation. The simulant is also appropriate for research on dust control and spacesuit durability. JSC-1 can be used as a chemical or mineralogical analog to some lunar soils for resource studies such as oxygen or metal production, sintering, and radiation shielding.

A geologic assessment of potential lunar ores

NASA Technical Reports Server (NTRS)

Mckay, D. S.; Williams, R. J.

1979-01-01

Although bulk lunar soil is not a suitable feedstock for extracting metals, certain minerals such as anorthite and ilmenite can be separated and concentrated. These minerals can be considered as potential ores of aluminum, silicon, titanium, andiron. A separation and metal extraction plant could also extract large amounts of oxygen and perhaps hydrogen from these minerals. Anorthie containing 19 percent aluminum and 20 percent silicon can be concentrated from some highland soils where it is present in amounts up to 60 percent. Ilmenite containing 32 percent titanium and 37 percent iron can be concentrated from some mare soils where it is present in amounts up to 10 percent. The ideal mining site would be located at the boundary between a high-titanium mare and a high-aluminum highlands. Such area may exist around the rims of some eastern maria, particularly Tranquilitatis. A location on Earth with raw materials as described above would be considered an economically valuable ore deposit if conventional terrestrial resources were not available.

Microbial, Physical and Chemical Drivers of COS and 18O-CO2 Exchange in Soils

NASA Astrophysics Data System (ADS)

Meredith, L. K.; Boye, K.; Whelan, M.; Pang, E.; von Sperber, C.; Brueggemann, N.; Berry, J. A.; Welander, P. V.

2015-12-01

Carbonyl sulfide (COS) and the oxygen isotope composition (δ18O) of CO2 are potential tools for differentiating the contributions of photosynthesis and respiration to the balance of global carbon cycling. These processes are coupled at the leaf level via the enzyme carbonic anhydrase (CA), which hydrolyzes CO2 in the first biochemical step of the photosynthetic pathway (CO2 + H2O ⇌ HCO3- + H+) and correspondingly structural analogue COS (COS + H2O → CO2 + H2S). CA also accelerates the exchange of oxygen isotopes between CO2 and H2O leading to a distinct isotopic imprint [1]. The biogeochemical cycles of these tracers include significant, yet poorly characterized soil processes that challenge their utility for probing the carbon cycle. In soils, microbial CA also hydrolyze COS and accelerate O isotope exchange between CO2 and soil water. Soils have been observed to emit COS by undetermined processes. To account for these soil processes, measurements are needed to identify the key microbial, chemical, and physical factors. In this study, we survey COS and δ18O exchange in twenty different soils spanning a variety of biomes and soil properties. By comparing COS fluxes and δ18O-CO2 values emitted from moist soils we investigate whether the same types of CA catalyze these two processes. Additionally, we seek to identify the potential chemical drivers of COS emissions by measuring COS fluxes in dry soils. These data are compared with soil physical (bulk density, volumetric water content, texture), chemical (pH, elemental analysis, sulfate, sulfur K-edge XANES), and microbial measurements (biomass and phylogeny). Furthermore, we determine the abundance and diversity of CA-encoding genes to directly link CA with measured soil function. This work will define the best predictors for COS fluxes and δ18O-CO2 values from our suite of biogeochemical measurements. The suitability of identified predictor variables can be tested in follow-up studies and applied for modeling purposes. References: [1] Von Sperber, C., Weiler, M. and Brüggemann, N.: The effect of soil moisture, soil particle size, litter layer and carbonic anhydrase on the oxygen isotopic composition of soil-released CO2, Eur. J. Soil Sci., 66(3), doi:10.1111/ejss.12241, 2015.

Sequential Desorption of Nitroaromatic Compounds (NAC) from Soils

DTIC Science & Technology

2005-03-01

the soil solution . Weissmahr et al. [20] suggest an electron donor acceptor (EDA) complex between oxygens of the siloxane surface of the clays and the...release of NACs into the soil solution . At high pH values desorption is superimposed by NACs hydrolysis. Therefore, in- creasing pH values impedes the...presented demonstrate that both the cation present in the soil solution and its concentration may affect the desorption behavior of NACs in contaminated soils

Plant effects on soil denitrification - a review of potential mechanisms

NASA Astrophysics Data System (ADS)

Malique, Francois; Butterbach-Bahl, Klaus; Dannenmann, Michael

2017-04-01

Denitrification is a microbial process occurring in soils, both producing and consuming the potent greenhouse gas nitrous oxide (NO), competing for nitrate with plants and hydrological leaching pathways, removing nutrients and reactive nitrogen from the biosphere, and closing the global nitrogen cycle. Despite its obvious importance, denitrification remained among the least well quantified biogeochemical processes in soils. This is due to enormous methodological difficulties involved in the direct quantification of soil microbial denitrification rates (mainly with regard to the terminal product N2) and the denitrification nitrogen gas product ratios (NO:N2O:N2), Plants may affect denitrification through a myriad of mechanisms such as e.g., competition for nitrate and water, through oxygen consumption, by regulating litter quality and changing soil pH, and via the exudation of labile carbon or secondary plant compounds involved in shaping the rhizospheric microbial community. However, plant effects on denitrification so far hardly were quantified so that the actual extent of plant control on denitrification is largely unknown. Here, we summarize the current knowledge on mechanisms how plants can affect denitrification rates and N gas product ratios in soils at temporal scales from hours to days and years. We review earlier research to quantify plant effects on denitrification as well as critically discuss the limited methods currently available to quantify plant-soil-denitrifier interactions. Finally, we provide pointers to use plants as tools to manage denitrification, e.g. to improve N use efficiency in agricultural ecosystems and to minimize soil nitrous oxide emissions.

Effects of biochar amendment on geotechnical properties of landfill cover soil.

PubMed

Reddy, Krishna R; Yaghoubi, Poupak; Yukselen-Aksoy, Yeliz

2015-06-01

Biochar is a carbon-rich product obtained when plant-based biomass is heated in a closed container with little or no available oxygen. Biochar-amended soil has the potential to serve as a landfill cover material that can oxidise methane emissions for two reasons: biochar amendment can increase the methane retention time and also enhance the biological activity that can promote the methanotrophic oxidation of methane. Hydraulic conductivity, compressibility and shear strength are the most important geotechnical properties that are required for the design of effective and stable landfill cover systems, but no studies have been reported on these properties for biochar-amended landfill cover soils. This article presents physicochemical and geotechnical properties of a biochar, a landfill cover soil and biochar-amended soils. Specifically, the effects of amending 5%, 10% and 20% biochar (of different particle sizes as produced, size-20 and size-40) to soil on its physicochemical properties, such as moisture content, organic content, specific gravity and pH, as well as geotechnical properties, such as hydraulic conductivity, compressibility and shear strength, were determined from laboratory testing. Soil or biochar samples were prepared by mixing them with 20% deionised water based on dry weight. Samples of soil amended with 5%, 10% and 20% biochar (w/w) as-is or of different select sizes, were also prepared at 20% initial moisture content. The results show that the hydraulic conductivity of the soil increases, compressibility of the soil decreases and shear strength of the soil increases with an increase in the biochar amendment, and with a decrease in biochar particle size. Overall, the study revealed that biochar-amended soils can possess excellent geotechnical properties to serve as stable landfill cover materials. © The Author(s) 2015.

Mechanistic modeling of thermo-hydrological processes and microbial interactions at pore to profile scales resolve methane emission dynamics from permafrost soil

NASA Astrophysics Data System (ADS)

Ebrahimi, Ali; Or, Dani

2017-04-01

The sensitivity of the Earth's polar regions to raising global temperatures is reflected in rapidly changing hydrological processes with pronounced seasonal thawing of permafrost soil and increased biological activity. Of particular concern is the potential release of large amounts of soil carbon and the stimulation of other soil-borne GHG emissions such as methane. Soil methanotrophic and methanogenic microbial communities rapidly adjust their activity and spatial organization in response to permafrost thawing and a host of other environmental factors. Soil structural elements such as aggregates and layering and hydration status affect oxygen and nutrient diffusion processes thereby contributing to methanogenic activity within temporal anoxic niches (hotspots or hot-layers). We developed a mechanistic individual based model to quantify microbial activity dynamics within soil pore networks considering, hydration, temperature, transport processes and enzymatic activity associated with methane production in soil. The model was the upscaled from single aggregates (or hotspots) to quantifying emissions from soil profiles in which freezing/thawing processes provide macroscopic boundary conditions for microbial activity at different soil depths. The model distinguishes microbial activity in aerate bulk soil from aggregates (or submerged parts of the profile) for resolving methane production and oxidation rates. Methane transport pathways through soil by diffusion and ebullition of bubbles vary with hydration dynamics and affect emission patterns. The model links seasonal thermal and hydrologic dynamics with evolution of microbial community composition and function affecting net methane emissions in good agreement with experimental data. The mechanistic model enables systematic evaluation of key controlling factors in thawing permafrost and microbial response (e.g., nutrient availability, enzyme activity, PH) on long term methane emissions and carbon decomposition rates in the rapidly changing polar regions.

Obtaining Representative Field Information for Vapor Intrusion Assessments: What Do You Need to Know? (St. Louis, MO)

EPA Science Inventory

The rate and extent of biodegradation a contaminant of concern (such as benzene) in soil gas is controlled by the supply of molecular oxygen. The supply of oxygen is limited by the competing demands for oxygen to support the biodegradation of methane and total petroleum hydroc...

Moisture effect in prompt gamma measurements from soil samples.

PubMed

Naqvi, A A; Khiari, F Z; Liadi, F A; Khateeb-Ur-Rehman; Raashid, M A; Isab, A H

2016-09-01

The variation in intensity of 1.78MeV silicon, 6.13MeV oxygen, and 2.22MeV hydrogen prompt gamma rays from soil samples due to the addition of 5.1, 7.4, 9.7, 11.9 and 14.0wt% water was studied for 14MeV incident neutron beams utilizing a LaBr3:Ce gamma ray detector. The intensities of 1.78MeV and 6.13MeV gamma rays from silicon and oxygen, respectively, decreased with increasing sample moisture. The intensity of 2.22MeV hydrogen gamma rays increases with moisture. The decrease in intensity of silicon and oxygen gamma rays with moisture concentration indicates a loss of 14MeV neutron flux, while the increase in intensity of 2.22MeV gamma rays with moisture indicates an increase in thermal neutron flux due to increasing concentration of moisture. The experimental intensities of silicon, oxygen and hydrogen prompt gamma rays, measured as a function of moisture concentration in the soil samples, are in good agreement with the theoretical results obtained through Monte Carlo calculations. Copyright © 2016 Elsevier Ltd. All rights reserved.

Irrigation with oxygen-nanobubble water can reduce methane emission and arsenic dissolution in a flooded rice paddy

NASA Astrophysics Data System (ADS)

Minamikawa, Kazunori; Takahashi, Masayoshi; Makino, Tomoyuki; Tago, Kanako; Hayatsu, Masahito

2015-08-01

A remarkable feature of nanobubbles (<10-6 m in diameter) is their long lifetime in water. Supplying oxygen-nanobubbles (NBs) to continuously flooded paddy soil may retard the development of reductive conditions, thereby reducing the emission of methane (CH4), a potent greenhouse gas, and dissolution of arsenic, an environmental load. We tested this hypothesis by performing a pot experiment and measuring redox-related variables. The NBs were introduced into control water (with properties similar to those of river water) using a commercially available generator. Rice (Oryza sativa L.) growth did not differ between plants irrigated with NB water and those irrigated with control water, but NB water significantly (p < 0.05) reduced cumulative CH4 emission during the rice-growing season by 21%. The amounts of iron, manganese, and arsenic that leached into the drainage water before full rice heading were also reduced by the NB water. Regardless of the water type, weekly-measured CH4 flux was linearly correlated with the leached iron concentration during the rice-growing season (r = 0.74, p < 0.001). At the end of the experiment, the NB water significantly lowered the soil pH in the 0-5 cm layer, probably because of the raised redox potential. The population of methanogenic Archaea (mcrA copy number) in the 0-5 cm layer was significantly increased by the NB water, but we found no correlation between the mcrA copy number and the cumulative CH4 emission (r = -0.08, p = 0.85). In pots without rice plants, soil reduction was not enhanced, regardless of the water type. The results indicate that NB water reduced CH4 emission and arsenic dissolution through an oxidative shift of the redox conditions in the flooded soil. We propose the use of NB water as a tool for controlling redox conditions in flooded paddy soils.

Subsurface flow and vegetation patterns in tidal environments

NASA Astrophysics Data System (ADS)

Ursino, Nadia; Silvestri, Sonia; Marani, Marco

2004-05-01

Tidal environments are characterized by a complex interplay of hydrological, geomorphic, and biological processes, and their understanding and modeling thus require the explicit description of both their biotic and abiotic components. In particular, the presence and spatial distribution of salt marsh vegetation (a key factor in the stabilization of the surface soil) have been suggested to be related to topographic factors and to soil moisture patterns, but a general, process-based comprehension of this relationship has not yet been achieved. The present paper describes a finite element model of saturated-unsaturated subsurface flow in a schematic salt marsh, driven by tidal fluctuations and evapotranspiration. The conditions leading to the establishment of preferentially aerated subsurface zones are studied, and inferences regarding the development and spatial distribution of salt marsh vegetation are drawn, with important implications for the overall ecogeomorphological dynamics of tidal environments. Our results show that subsurface water flow in the marsh induces complex water table dynamics, even when the tidal forcing has a simple sinusoidal form. The definition of a space-dependent aeration time is then proposed to characterize root aeration. The model shows that salt marsh subsurface flow depends on the distance from the nearest creek or channel and that the subsurface water movement near tidal creeks is both vertical and horizontal, while farther from creeks, it is primarily vertical. Moreover, the study shows that if the soil saturated conductivity is relatively low (10-6 m s-1, values quite common in salt marsh areas), a persistently unsaturated zone is present below the soil surface even after the tide has flooded the marsh; this provides evidence of the presence of an aerated layer allowing a prolonged presence of oxygen for aerobic root respiration. The results further show that plant transpiration increases the extent and persistence of the aerated layer, thereby introducing a strong positive feedback: Pioneer plants on marsh edges have the effect of increasing soil oxygen availability, thus creating the conditions for the further development of other plant communities.

Metabolomics analysis of the effect of dissolved oxygen on spinosad production by Saccharopolyspora spinosa.

PubMed

Lu, Chunzhe; Yin, Jing; Zhao, Fanglong; Li, Feng; Lu, Wenyu

2017-05-01

Spinosad, a universal bio-pesticide, is obtained from the soil actinomycete Saccharopolyspora spinosa. Dissolved oxygen, an important contributing factor in aerobic microbial fermentation, however, is not always available in sufficient amounts. To alleviate oxygen limitation in spinosad production, three different oxygen vectors, namely oleic acid, toluene, and n-dodecane, were added into early fermentation. Results indicated that n-dodecane was the optimal oxygen vector. Spinosad yield was increased by 44.2% compared to that in the control group in the presence of 0.5% n-dodecane, added after 120 h of incubation. Yields of the test group reached 6.52 mg/g dry cell weight (DCW), while that of the control group was limited to 4.52 mg/g DCW. Metabolomics analysis by gas chromatography coupled to mass spectrometry was performed to demonstrate the metabolism mechanism in the presence and absence of oxygen vector. In total, 78 principal intracellular metabolites in S. spinosa were detected and quantified in the presence and absence of n-dodecane. Levels of some metabolites that were related to the tricarboxylic acid cycle and pentose phosphate pathway varied significantly. Aspartic acid and glucose-1-phosphate levels varied significantly and contributed most in the distinction of the fermentation conditions and phases. The above findings give new insights into the improvement and the metabolomic characteristics of industrial spinosad production.

Biochar as soil amendment to improve soil quality, crop yield, and carbon sequestration

USDA-ARS?s Scientific Manuscript database

Biochar, a by-product of a thermochemical process called pyrolysis, which involves burning of any agricultural and animal waste (biomass) under high temperature and absence of oxygen. It is assumed that since biochar is very high in aromatic carbon, which persists in soil environment for very long ...

Enhanced formation of aerenchyma and induction of a barrier to radial oxygen loss in adventitious roots of Zea nicaraguensis contribute to its waterlogging tolerance as compared with maize (Zea mays ssp. mays).

PubMed

Abiko, Tomomi; Kotula, Lukasz; Shiono, Katsuhiro; Malik, Al Imran; Colmer, Timothy David; Nakazono, Mikio

2012-09-01

Enhancement of oxygen transport from shoot to root tip by the formation of aerenchyma and also a barrier to radial oxygen loss (ROL) in roots is common in waterlogging-tolerant plants. Zea nicaraguensis (teosinte), a wild relative of maize (Zea mays ssp. mays), grows in waterlogged soils. We investigated the formation of aerenchyma and ROL barrier induction in roots of Z. nicaraguensis, in comparison with roots of maize (inbred line Mi29), in a pot soil system and in hydroponics. Furthermore, depositions of suberin in the exodermis/hypodermis and lignin in the epidermis of adventitious roots of Z. nicaraguensis and maize grown in aerated or stagnant deoxygenated nutrient solution were studied. Growth of maize was more adversely affected by low oxygen in the root zone (waterlogged soil or stagnant deoxygenated nutrient solution) compared with Z. nicaraguensis. In stagnant deoxygenated solution, Z. nicaraguensis was superior to maize in transporting oxygen from shoot base to root tip due to formation of larger aerenchyma and a stronger barrier to ROL in adventitious roots. The relationships between the ROL barrier formation and suberin and lignin depositions in roots are discussed. The ROL barrier, in addition to aerenchyma, would contribute to the waterlogging tolerance of Z. nicaraguensis. © 2012 Blackwell Publishing Ltd.

Competing for phosphors under changing redox conditions: biological versus geochemical sinks

NASA Astrophysics Data System (ADS)

Gross, A.; Pett-Ridge, J.; Silver, W. L.

2016-12-01

Competing for phosphorus under changing redox conditions: biological versus geochemical sinksAvner Gross1, Jennifer Pett-Ridge2 and Whendee L Silver1 University of California Berkeley, Department of Environmental Science, Policy, & Management, Berkeley, CA, USA. Lawrence Livermore National Laboratory, Physical and Life Science Directorate, Livermore, CA, USA. The cycling of phosphorous (P) in highly weathered, humid tropical forest soils is tightly regulated by P sorption dynamics to the surfaces of Fe(III) (hydr)oxides and root and microbial demands for P. Periods of anoxic soil conditions, which are common in humid environments, induce the reduction of Fe (III) to Fe (II) and may release sorbed P into the soil solution. The microbial demand for P is influenced by the C and nutrient composition of their available substrates. Therefore, we hypothesize that soil redox conditions and substrate quality and availability will control the partitioning of P between microbial biomass and the soil mineral phase. The aim of this study was to examine how fluctuations in soil redox conditions and changes in microbial P demand affect the fate of new P that enters the soil solution. To achieve this aim we conducted a series of soil incubation experiments using a wet tropical soil from Puerto Rico (where redox conditions and P availability naturally oscillate) with a single pulse of phosphate (PO4), altering both the microbial activity and redox conditions. To follow the fate the added P, the added phosphate was labeled with 18O. As the exchange of oxygen between phosphate and water only occurs during biological processes, P-18O labeling can be used as an indicator of microbial use. To quantify sizes of the microbial and mineral P pools we used traditional chemical extractions in the bulk scale. We used NanoSIMS isotopic imaging to map the distribution of P-16O and P-18O and co-localization with Fe minerals at the nano scale. Our results show that the amount of the added P fixed by the mineral phase was inversely correlated to the amount of P assimilated by the microbial biomass. In addition, we discovered the iron redox state did not affect the microbial or mineral P pool sizes. Overall, our results indicate the partition of the added P between the biological and mineral pools is regulated by the microbial biomass demands for P.

Hypothesized link between Neoproterozoic greening of the land surface and the establishment of an oxygen-rich atmosphere

PubMed Central

Kump, Lee R.

2014-01-01

Considerable geological, geochemical, paleontological, and isotopic evidence exists to support the hypothesis that the atmospheric oxygen level rose from an Archean baseline of essentially zero to modern values in two steps roughly 2.3 billion and 0.8–0.6 billion years ago (Ga). The first step in oxygen content, the Great Oxidation Event, was likely a threshold response to diminishing reductant input from Earth’s interior. Here I provide an alternative to previous suggestions that the second step was the result of the establishment of the first terrestrial fungal–lichen ecosystems. The consumption of oxygen by aerobes respiring this new source of organic matter in soils would have necessitated an increase in the atmospheric oxygen content to compensate for the reduced delivery of oxygen to the weathering environment below the organic-rich upper soil layer. Support for this hypothesis comes from the observed spread toward more negative carbon isotope compositions in Neoproterozoic (1.0–0.542 Ga) and younger limestones altered under the influence of ground waters, and the positive correlation between the carbon isotope composition and oxygen content of modern ground waters in contact with limestones. Thus, the greening of the planet’s land surfaces forced the atmospheric oxygen level to a new, higher equilibrium state. PMID:25225378

Oxygen isotopes as a tracer of phosphate sources and cycling in aquatic systems (Invited)

NASA Astrophysics Data System (ADS)

Young, M. B.; Kendall, C.; Paytan, A.

2013-12-01

The oxygen isotopic composition of phosphate can provide valuable information about sources and processes affecting phosphorus as it moves through hydrologic systems. Applications of this technique in soil and water have become more common in recent years due to improvements in extraction methods and instrument capabilities, and studies in multiple aquatic environments have demonstrated that some phosphorus sources may have distinct isotopic compositions within a given system. Under normal environmental conditions, the oxygen-phosphorus bonds in dissolved inorganic phosphate (DIP) can only be broken by enzymatic activity. Biological cycling of DIP will bring the phosphate oxygen into a temperature-dependent equilibrium with the surrounding water, overprinting any existing isotopic source signals. However, studies conducted in a wide range of estuarine, freshwater, and groundwater systems have found that the phosphate oxygen is often out of biological equilibrium with the water, suggesting that it is common for at least a partial isotopic source signal to be retained in aquatic systems. Oxygen isotope analysis on various potential phosphate sources such as synthetic and organic fertilizers, animal waste, detergents, and septic/wastewater treatment plant effluents show that these sources span a wide range of isotopic compositions, and although there is considerable overlap between the source groups, sources may be isotopically distinct within a given study area. Recent soil studies have shown that isotopic analysis of phosphate oxygen is also useful for understanding microbial cycling across different phosphorus pools, and may provide insights into controls on phosphorus leaching. Combining stable isotope information from soil and water studies will greatly improve our understanding of complex phosphate cycling, and the increasing use of this isotopic technique across different environments will provide new information regarding anthropogenic phosphate inputs and controls on biological cycling within hydrologic systems.

Mineral constituents in water and their significance

USGS Publications Warehouse

Dover, T.B.

1950-01-01

Pure water does not exist in nature. Because water is a powerful solvent, every drop of rain water carries dissolved or suspended material - dust, pollen, and smoke, as well as the atmospheric gases, oxygen, nitrogen and carbon dioxide. When rain falls, the water running over the rocks and percolating through the soil gathers more and more mineral matter in solution. As the uses to which a water supply may be put depend primarily on its mineral content, information concerning the chemical characteristics of water is of importance to each of us. (available as photostat copy only)

Profile distribution of polycyclic aromatic hydrocarbons in soils of drained peatlands after wildfires (Moscow region, Russia)

NASA Astrophysics Data System (ADS)

Tsibart, Anna; Gennadiev, Alexander; Koshovskii, Timur; Kovach, Roman

2014-05-01

Polycyclic aromatic compounds (PAHs) are formed in different natural and anthropogenic processes and could be found in many landscape components. These compounds are carcinogenic and belong to the group of persistent organic pollutants. The anthropogenic sources of PAHs are well-studied, but insufficient data are available on the hightemperature production of PAHs in natural processes. For example, natural fires are frequently related to the PAHs sources in landscapes, but very little factual data are on this topic. The soils of drained peatlands affected by catastrophic wildfires of 2010 and 2002 were studied in the Eastern part of Moscow Region (Russia). A total of 14 profiles of histosols and histic podsols were investigated. These series included soils of plots subjected to fires of different intensities and age, as well as soils of the background plots. Soil samples were taken from genetic horizons and from every 10 cm. The samples were analyzed for the contents of 14 prevailing individual compounds: fluorene, naphthalene, phenanthrene, chrysene, pyrene, anthracene, tetraphene, benz[a]pyrene, benzo[ghi]perylene, benzo[e]pyrene, coronene, dibenztiophene, triphenilene, benz(k)fluorantene. Morfological properties of soils after wildfires on drained peatlands were changed dramatically, the horizons of ash and char instead of organic layers were formed. These new horizons differ in the capability of PAHs accumulation. The char horizons have the highest concentrations of PAHs - up to 300 ng/g because of incomplete burning of organic matter in this sites, and the ash horizons, where the complete burning occured, contain only 10 ng/g PAHs. The highest concentrations of PAHs in soil profiles were detected after recent fires, and in cases of thick peat layers. After the combustion of peat chrysene, benz[a]pyrene, benz[e]pyrene, benzo[ghi]perylene, benz(k)fluorantene and tetraphene accumulated in soils. This is mainly the group of 4-6-nuclear compounds. The formation of high-molecular weight compounds is possible during smoldering process under a low oxygen supply. The oxygen deficit acts as a factor of the organic fragments recombination and PAHs production; therefore, relatively large amounts of PAHs are formed in peat fires. Moreover the peat fires occur directly in the soil layer; therefore, larger amounts of the resulting PAHs remain in the soils of the fire sites. The migration of low-molecular weight compounds occures in histic podsols, in histosols PAHs accumalate only in upper organic horizons. The research was conducted with the support of Russian Geographical Society.

The Impact of Iron on Soil N2O Production Depends on Oxygen Availability

NASA Astrophysics Data System (ADS)

Zhu, X.; Doane, T. A.; Burger, M.; Horwath, W. R.

2014-12-01

The continuous increase of nitrous oxide (N2O) abundance in the atmosphere is a global concern. Soils are both an important source and sink of N2O, which is produced and consumed through biological processes including ammonia oxidation, heterotrophic denitrification, codenitrification, and through abiotic processes such as chemodenitrification. Iron is the most abundant element in the earth and is also the most prevalent redox-active metal in the biosphere. Its role in both chemical and biochemical reactions in N biogeochemistry cycling is well recognized. However, iron's significance to N2O production is poorly understood, especially under varying O2 concentration. We examined N2O production under different O2 concentrations following amorphous iron (III) oxyhydroxide and ammonical N fertilizer additions in four soil slurries and two static soils (soil moisture was 50% of water holding capacity). Under 21% O2, the addition of iron (III) significantly decreased N2O production in all the soil slurries and static soils, while the opposite phenomenon was observed once the O2 concentration became limited (≤3% in the soil slurry and ≤0.5% in the static soil). Our results show that the influence of iron on soil N2O production depends on O2 availability, which is the dominant controller of N2O production pathways. We hypothesize that under ambient O2 conditions, iron can react with nitrite produced during ammonia oxidation, thus reducing the probability of NO2- being used by nitrifiers as electron acceptor in nitrifier denitrification. In contrast, under anaerobic conditions (O2<0.5%), less nitrite was detected in the presence of the iron addition. Under these conditions, iron may have inhibited N2O reductase, or reduced iron (II) reacted with nitrite, both of which would lead to greater release of N2O.These findings imply that management practices which focus on mitigating N2O emission should avoid the application of iron-rich materials such as biosolids when anaerobic conditions might develop. In contrast, use of such materials could be a beneficial component of strategies to minimize N2O emission in well-aerated systems.

Time and substrate dependent exudation of carboxylates by Lupinus albus L. and Brassica napus L.

PubMed

Mimmo, Tanja; Hann, Stephan; Jaitz, Leonhard; Cesco, Stefano; Gessa, Carlo Emanuele; Puschenreiter, Markus

2011-11-01

Root exudates influence significantly physical, chemical and biological characteristics of rhizosphere soil. Their qualitative and quantitative composition is affected by environmental factors such as pH, soil type, oxygen status, light intensity, soil temperature, plant growth, nutrient availability and microorganisms. The aim of the present study was to assess the influence of growth substrate and plant age on the release of carboxylates from Lupinus albus L. and Brassica napus L. Both plant species were studied in continuously percolated microcosms filled with either sand, soil or sand + soil (1:1) mixture. Soil solution was collected every week at 7, 14, 21, 28 and 35 days after planting (DAP). Carboxylate concentrations were determined by reversed-phase liquid chromatography - electrospray ionization - time of flight mass spectrometry (LC-ESI-TOFMS). Oxalate, citrate, succinate, malate and maleate were detected in soil solutions of both plant species. Their concentrations were correlated with the physiological status of the plant and the growth substrate. Oxalate was the predominant carboxylate detected within the soil solution of B. napus plants while oxalate and citrate were the predominant ones found in the soil solutions of L. albus plants. The sampling determination of carboxylates released by plant roots with continuous percolation systems seems to be promising as it is a non-destructive method and allows sampling and determination of soluble low molecular weight organic compounds derived from root exudation as well as the concentration of soluble nutrients, which both might reflect the nutritional status of plants. Copyright © 2011 Elsevier Masson SAS. All rights reserved.

Regulation of Microbial Herbicide Transformation by Coupled Moisture and Oxygen Dynamics in Soil

NASA Astrophysics Data System (ADS)

Marschmann, G.; Pagel, H.; Uksa, M.; Streck, T.; Milojevic, T.; Rezanezhad, F.; Van Cappellen, P.

2017-12-01

The key processes of herbicide fate in agricultural soils are well-characterized. However, most of these studies are from batch experiments that were conducted under optimal aerobic conditions. In order to delineate the processes controlling herbicide (i.e., phenoxy herbicide 2-methyl-4-chlorophenoxyacetic acid, MCPA) turnover in soil under variable moisture conditions, we conducted a state-of-the-art soil column experiment, with a highly instrumented automated soil column system, under constant and oscillating water table regimes. In this system, the position of the water table was imposed using a computer-controlled, multi-channel pump connected to a hydrostatic equilibrium reservoir and a water storage reservoir. The soil samples were collected from a fertilized, arable and carbon-limited agricultural field site in Germany. The efflux of CO2 was determined from headspace gas measurements as an integrated signal of microbial respiration activity. Moisture and oxygen profiles along the soil column were monitored continuously using high-resolution moisture content probes and luminescence-based Multi Fiber Optode (MuFO) microsensors, respectively. Pore water and solid-phase samples were collected periodically at 8 depths and analyzed for MCPA, dissolved inorganic and organic carbon concentrations as well as the abundance of specific MCPA-degrading bacteria. The results indicated a clear effect of the water table fluctuations on CO2 fluxes, with lower fluxes during imbibition periods and enhanced CO2 fluxes after drainage. In this presentation, we focus on the results of temporal changes in the vertical distribution of herbicide, specific herbicide degraders, organic carbon concentration, moisture content and oxygen. We expect that the high spatial and temporal resolution of measurements from this experiment will allow robust calibration of a reactive transport model for the soil columns, with subsequent identification and quantification of rate limiting processes of MCPA turnover. This will ultimately improve our overall understanding of herbicide fate processes as a function of soil water regime.

Physiological profiling of soil microbial communities in a Florida scrub-oak ecosystem: spatial distribution and nutrient limitations.

PubMed

Brown, Alisha L P; Garland, Jay L; Day, Frank P

2009-01-01

Rapid physiological profiling of heterotrophic microbial communities enables intensive analysis of the factors affecting activity in aerobic habitats, such as soil. Previous methods for performing such profiling were severely limited due to enrichment bias and inflexibility in incubation conditions. We tested a new physiological profiling approach based on a microtiter plate oxygen sensor system (Becton Dickinson Oxygen Biosensor System (BDOBS)), which allows for testing of lower substrate addition (i.e., lower enrichment potential) and manipulation of physiochemical assay conditions, such as pH and nutrients. Soil microbial communities associated with a scrub-oak forest ecosystem on Merritt Island Wildlife Refuge in central Florida, USA, were studied in order to evaluate microbial activity in a nutrient poor soil and to provide baseline data on the site for subsequent evaluation of the effects of elevated CO(2) on ecosystem function. The spatial variation in physiological activity amongst different habitats (litter, bulk soil, and rhizosphere) was examined as a function of adaptation to local resources (i.e., water soluble extracts of roots and leaf litter) and the degree of N and P limitation. All the communities were primarily N-limited, with a secondary P limitation, which was greater in the rhizosphere and bulk soil. The litter community showed greater overall oxygen consumption when exposed to litter extracts relative to the rhizosphere or soil, suggesting acclimation toward greater use of the mixed substrates in the extract. Root extracts were readily used by communities from all the habitats with no habitat specific acclimation observed. A priming effect was detected in all habitats; addition of glucose caused a significant increase in the use of soil organic carbon. Response to added glucose was only observed with N and P addition, suggesting that C may be lost to the groundwater from these porous soils because nutrient limitation prevents C immobilization.

International Critical Zone Science: Opportunities to Build a Global Understanding of Land-Water Linkages

NASA Astrophysics Data System (ADS)

McDowell, W. H.

2015-12-01

Critical Zone science examines the structure and properties of the thin veneer that links surface properties to deep geology, at time scales of seconds to millennia. One of the fundamental premises of the US Critical Zone Observatories program is that CZOs should include some measurements made in common at all sites, as these common measurements will enable us to make stronger inferences about how the structure and function of the critical zone interact to drive key processes such as soil formation, stream flow generation, and nutrient export. Recent advances in real-time sensors provide new opportunities to address some fundamental questions about how hillslope soils and streams are linked. Data from the Luquillo Critical Zone Observatory in Puerto Rico, for example, document a previously undescribed transition, or flipping, of stream and soil biogeochemistry in a tropical rain forest. Under typical conditions, soil moisture is high and soil oxygen content is often low, especially at depth. Streams, in contrast, are typically near oxygen saturation. Under severe drought, however, oxygen increases dramatically in soil air and declines to values that are well below saturation in streams. This flipping in redox conditions suggests that despite the strong hydrologic connection between hillslope and stream, gas dynamics and potentially solute dynamics are decoupled along the flow path. The international CZO community has the opportunity to develop a suite of sensor arrays to document soil air, groundwater chemistry, and stream water chemistry. Progress towards realizing the potential of these international networks to develop coherent sensor programs will be addressed based on the current status of sensor deployments in CZO networks in the US, China, and Europe.

Determination of degradation rates of organic substances in the unsaturated soil zone depending on the grain size fractions of various soil types

NASA Astrophysics Data System (ADS)

Fichtner, Thomas; Stefan, Catalin; Goersmeyer, Nora

2015-04-01

Rate and extent of the biological degradation of organic substances during transport through the unsaturated soil zone is decisively influenced by the chemical and physical properties of the pollutants such as water solubility, toxicity and molecular structure. Furthermore microbial degradation processes are also influenced by soil-specific properties. An important parameter is the soil grain size distribution on which the pore volume and the pore size depends. Changes lead to changes in air and water circulation as well as preferred flow paths. Transport capacity of water inclusive nutrients is lower in existing bad-drainable fine pores in soils with small grain size fractions than in well-drainable coarse pores in a soil with bigger grain size fractions. Because fine pores are saturated with water for a longer time than the coarse pores and oxygen diffusion in water is ten thousand times slower than in air, oxygen is replenished much slower in soils with small grain size fractions. As a result life and growth conditions of the microorganisms are negatively affected. This leads to less biological activity, restricted degradation/mineralization of pollutants or altered microbial processes. The aim of conducted laboratory column experiments was to study the correlation between the grain size fractions respectively pore sizes, the oxygen content and the biodegradation rate of infiltrated organic substances. Therefore two columns (active + sterile control) were filled with different grain size fractions (0,063-0,125 mm, 0,2-0,63 mm and 1-2 mm) of soils. The sterile soil was inoculated with a defined amount of a special bacteria culture (sphingobium yanoikuae). A solution with organic substances glucose, oxalic acid, sinaphylic alcohol and nutrients was infiltrated from the top in intervals. The degradation of organic substances was controlled by the measurement of dissolved organic carbon in the in- and outflow of the column. The control of different pore volumes respectively pore sizes in the soil samples occurred by air pycnometer measurement and determination of soil moisture characteristic by evaporation method according to Wind/Schindler. The present study results can be useful to find a correlation between various soil types with different grain size distributions and the suitability of these soils for example for the infiltration of treated wastewater in the context of managed aquifer recharge (MAR) measures.

Soil Carbon Distribution along a Hill Slope in the Siberian Arctic

NASA Astrophysics Data System (ADS)

Ludwig, S.; Bunn, A. G.; Schade, J. D.

2011-12-01

Arctic ecosystems are warming at an accelerated rate relative to lower latitudes, and this warming has significant global significance. In particular, the thawing of permafrost soils has the potential to strongly influence global carbon cycling and the functioning of terrestrial and aquatic ecosystems. Our overarching scientific goal is to study the impact of thawing permafrost on the transport and processing of carbon and other nutrients as they move with water from terrestrial ecosystems to the Arctic Ocean. Transport of materials from soil to headwater aquatic ecosystems is the first step in this movement. Processes occurring along hill slopes strongly influence the form and concentration of material available for transport. These processes include downhill accumulation of materials due to groundwater movement, or alternatively, local effects of changes in soil and vegetation characteristics. In this project, we studied a hill slope adjacent to a small first order stream in the Kolyma River in Eastern Siberia. We sampled soil at several points along three transects from the top of the hill to the riparian zone by coring and homogenizing the entire active layer at each point. We measured soil organic matter content, soil moisture, water extractable dissolved organic carbon (DOC), total dissolved nitrogen (TDN), NH4, NO3, soluble reactive phosphorus (SRP), and CDOM absorbance. We also measured soil respiration using a laboratory-based biological oxygen demand protocol conducted on soil-water slurries. Active layer depth decreased down the hillslope, while soil moisture, organic matter, and DOC all increased down the hillslope. CDOM absorbance increased downhill, which indicates a decrease in molecular weight of organic compounds at the bottom of the hill. This suggests either an input of newer carbon or processing of high molecular weight DOM down the slope. Soil respiration also increased downhill and was likely driven in part by increased OM in the shallower active layer. Finally, several soil variables were tightly correlated with active layer depth, suggesting that these patterns are driven by changes in the rate of thaw of the active layer driving local soil processes. Clearly, our results suggest significant changes in the form and amount of carbon available for processing and transport along hillslope transects, which may strongly influence the role of terrestrial-aquatic linkage in transport and processing of carbon and other nutrients.

Global simulation of interactions between groundwater and terrestrial ecosystems

NASA Astrophysics Data System (ADS)

Braakhekke, M. C.; Rebel, K.; Dekker, S. C.; Smith, B.; Van Beek, L. P.; Sutanudjaja, E.; van Kampenhout, L.; Wassen, M. J.

2016-12-01

In many places in the world ecosystems are influenced by the presence of a shallow groundwater table. In these regions upward water flux due to capillary rise increases soil moisture availability in the root zone, which has strong positive effect on evapotranspiration. Additionally it has important consequences for vegetation dynamics and fluxes of carbon and nitrogen. Under water limited conditions shallow groundwater stimulates vegetation productivity, and soil organic matter decomposition while under saturated conditions groundwater may have a negative effect on these processes due to lack of oxygen. Furthermore, since plant species differ with respect to their root distribution, preference for moisture conditions, and resistance to oxygen stress, shallow groundwater also influences vegetation type. Finally, processes such as denitrification and methane production occur under strictly anaerobic conditions and are thus strongly influenced by moisture availability. Most global hydrological models and several land surface models simulate groundwater table dynamics and their effects on land surface processes. However, these models typically have relatively simplistic representation of vegetation and do not consider changes in vegetation type and structure and are therefore less suitable to represent effects of groundwater on biogeochemical fluxes. Dynamic global vegetation models (DGVMs), describe land surface from an ecological perspective, combining detailed description of vegetation dynamics and structure and biogeochemical processes. These models are thus more appropriate to simulate the ecological and biogeochemical effects of groundwater interactions. However, currently virtually all DGVMs ignore these effects, assuming that water tables are too deep to affect soil moisture in the root zone. We have implemented a tight coupling between the dynamic global ecosystem model LPJ-GUESS and the global hydrological model PCR-GLOBWB. Using this coupled model we aim to study the influence of shallow groundwater on terrestrial ecosystem processes. We will present results of global simulations to demonstrate the effects on C, N, and water fluxes.

Random River Fluctuations Shape the Root Profile of Riparian Plants

NASA Astrophysics Data System (ADS)

Perona, P.; Tron, S.; Gorla, L.; Schwarz, M.; Laio, F.; Ridolfi, L.

2015-12-01

Plant roots are recognized to play a key role in the riparian ecosystems: they contribute to the plant as well as to the streambank and bedforms stability, help to enhance the water quality of the river, and sustain the belowground biodiversity. The complexity of the root-system architecture recalls their remarkable ability to respond to environmental conditions, notably including soil heterogeneity, resource availability, and climate. In fluvial environments where nutrient availability is not a limiting factor for plant to grow, the root growth of phreatophytic plants is strongly influenced by water and oxygen availability in the soil. In this work, we demonstrate that the randomness of water table fluctuations, determined by streamflow stochastic variability, is likely to be the main driver for the root development strategy of riparian plants. A collection of root measurements from field and outdoor controlled experiments is used to demonstrate that the vertical root density distribution can be described by a simple analytical expression, whose parameters are linked to properties of soil, plant and water table fluctuations. This physically-based expression is able to predict riparian plant roots adaptability to different hydrological and pedologic scenarios in riverine environments. Hence, this model has great potential towards the comprehension of the effects of future climate and environmental changing conditions on plant adaptation and river ecomorphodynamic processes. Finally, we present an open access graphical user interface that we developed in order to estimate the vertical root distribution in fluvial environments and to make the model easily available to a wider scientific and professional audience.

Assessing the dynamics of the upper soil layer relative to soil management practices

NASA Astrophysics Data System (ADS)

Hatfield, J.; Wacha, K.; Dold, C.

2017-12-01

The upper layer of the soil is the critical interface between the soil and the atmosphere and is the most dynamic in response to management practices. One of the soil properties most reflective to changes in management is the stability of the aggregates because this property controls infiltration of water and exchange of gases. An aggregation model has been developed based on the factors that control how aggregates form and the forces which degrade aggregates. One of the major factors for this model is the storage of carbon into the soil and the interaction with the soil biological component. To increase soil biology requires a stable microclimate that provides food, water, shelter, and oxygen which in turn facilitates the incorporation of organic material into forms that can be combined with soil particles to create stable aggregates. The processes that increase aggregate size and stability are directly linked the continual functioning of the biological component which in turn changes the physical and chemical properties of the soil. Soil aggregates begin to degrade as soon as there is no longer a supply of organic material into the soil. These processes can range from removal of organic material and excessive tillage. To increase aggregation of the upper soil layer requires a continual supply of organic material and the biological activity that incorporates organic material into substances that create a stable aggregate. Soils that exhibit stable soil aggregates at the surface have a prolonged infiltration rate with less runoff and a gas exchange that ensures adequate oxygen for maximum biological activity. Quantifying the dynamics of the soil surface layer provides a quantitative understanding of how management practices affect aggregate stability.

Phosphorus dynamics in soils irrigated with reclaimed waste water or fresh water - A study using oxygen isotopic composition of phosphate

USGS Publications Warehouse

Zohar, I.; Shaviv, A.; Young, M.; Kendall, C.; Silva, S.; Paytan, A.

2010-01-01

Transformations of phosphate (Pi) in different soil fractions were tracked using the stable isotopic composition of oxygen in phosphate (??18Op) and Pi concentrations. Clay soil from Israel was treated with either reclaimed waste water (secondary, low grade) or with fresh water amended with a chemical fertilizer of a known isotopic signature. Changes of ??18Op and Pi within different soil fractions, during a month of incubation, elucidate biogeochemical processes in the soil, revealing the biological and the chemical transformation impacting the various P pools. P in the soil solution is affected primarily by enzymatic activity that yields isotopic equilibrium with the water molecules in the soil solution. The dissolved P interacts rapidly with the loosely bound P (extracted by bicarbonate). The oxides and mineral P fractions (extracted by NaOH and HCl, respectively), which are considered as relatively stable pools of P, also exhibited isotopic alterations in the first two weeks after P application, likely related to the activity of microbial populations associated with soil surfaces. Specifically, isotopic depletion which could result from organic P mineralization was followed by isotopic enrichment which could result from preferential biological uptake of depleted P from the mineralized pool. Similar transformations were observed in both soils although transformations related to biological activity were more pronounced in the soil treated with reclaimed waste water compared to the fertilizer treated soil. ?? 2010 Elsevier B.V.

Analyzing the impacts of three types of biochar on soil carbon fractions and physiochemical properties in a corn-soybean rotation

USDA-ARS?s Scientific Manuscript database

Biochar is a soil amendment produced from incomplete pyrolysis of organic materials in the absence of oxygen. In most previous studies, the impacts of biochar on soil physical properties and organic carbon was investigated under controlled conditions such as laboratory or greenhouse environments. Th...

Spatial patterns in oxygen and redox sensitive biogeochemistry in tropical forest soils

Treesearch

Daniel Liptzin; Whendee L. Silver

2015-01-01

Humid tropical forest soils are characterized by warm temperatures, abundant rainfall, and high rates of biological activity that vary considerably in both space and time. These conditions, together with finely textured soils typical of humid tropical forests lead to periodic low redox conditions, even in well-drained upland environments. The relationship between redox...

Lignin decomposition is sustained under fluctuating redox conditions in humid tropical forest soils

Treesearch

Steven J. Hall; Whendee L. Silver; Vitaliy I. Timokhin; Kenneth E. Hammel

2015-01-01

Lignin mineralization represents a critical flux in the terrestrial carbon (C) cycle, yet little is known about mechanisms and environmental factors controlling lignin breakdown in mineral soils. Hypoxia is thought to suppress lignin decomposition, yet potential effects of oxygen (O2) variability in surface soils have not been explored. Here, we...

The identification of carbamazepine biodegrading phylotypes and phylotypes sensitive to carbamazepine exposure in two soil microbial communities.

PubMed

Thelusmond, Jean-Rene; Strathmann, Timothy J; Cupples, Alison M

2016-11-15

Carbamazepine (CBZ), an antiepileptic drug, has been introduced into agricultural soils via irrigation with treated wastewater and biosolids application. Such contamination is problematic because CBZ is persistent and the risks to ecosystems or human health are unknown. The current study examined CBZ biodegradation in two agricultural soils (soil 1 and 2) and the effects on the soil microbial communities during CBZ exposure. The experimental design involved three CBZ concentrations (50, 500, 5000ng/g), under aerobic as well as anaerobic conditions. CBZ concentrations were determined using solid phase extraction and LC MS/MS. The effect of CBZ on the soil microbial community was investigated using high throughput sequencing and a computational approach to predict functional composition of the metagenomes (phylogenetic investigation of communities by reconstruction of unobserved states, PICRUSt). The most significant CBZ biodegradation occurred in soil 1 under aerobic conditions. In contrast, CBZ biodegradation was limited under anaerobic conditions in soil 1 and under both conditions in soil 2. For soil 1, several phylotypes were enriched following CBZ degradation compared to the controls, including unclassified Sphingomonadaceae, Xanthomonadaceae and Rhodobacteraceae, as well as Sphingomonas, Aquicella and Microvirga. These phylotypes are considered putative CBZ degraders as they appear to be benefiting from CBZ biodegradation. PICRUSt revealed that soil 1 contained a greater abundance of xenobiotic degrading genes compared to soil 2, and thus, this analysis method offers a potential valuable approach for predicting CBZ attenuation in soils. PICRUSt analysis also implicated Sphingomonadaceae and Xanthomonadaceae in drug metabolism. Interestingly, numerous phylotypes decreased in abundance following CBZ exposure and these varied with soil type, concentration, duration of exposure, and the availability of oxygen. For three phylotypes (Flavobacterium, 3 genus incertae sedis and unclassified Bacteroidetes), the relative abundance was reduced in both soils, indicating a notable sensitivity to CBZ for these microorganisms. Copyright © 2016 Elsevier B.V. All rights reserved.

Determination of Oxygen Production by Cyanobacteria in Desert Environment Soil

NASA Astrophysics Data System (ADS)

Bueno Prieto, J. E.

2009-12-01

The cyanobacteria have been characterized for being precursor in the production of oxygen. By means of photosynthetic reactions, they provide oxygen to the environment that surrounds them and they capture part of surrounding dioxide of carbon. This way it happened since the primitive Earth until today. Besides, these microorganisms can support the harmful effects of ultraviolet radiation. The presence of cyanobacterias in an environment like a dry tropical bioma, such as the geographical location called Desert of The Tatacoa (Huila - Colombia), is determinant to establish parameters in the search of biological origin of atmospheric oxygen detected in Mars. In that case, I work with a random sample of not rhizospheric soil, taken to 15 cm of depth. After determining the presence of cyanobacterias in the sample, this one was in laboratory to stimulate the oxygen production. The presence of oxygen in Mars is very interesting. Since oxygen gas is very reactive, it disappear if it is not renewed; the possibility that this renovation of oxygen has a biological origin is encouraging, bearing in mind that in a dry environment and high radiation such as the studied one, the production of oxygen by cyanobacterias is notable. Also it is necessary to keep in mind that the existence of cyanobacterias would determine water presence in Mars subsoil and the nutrients cycles renovation. An interesting exploration possibility for some future space probe to Mars might be the study of worldwide distribution of oxygen concentration in this planet and this way, indentify zones suitable for microbian life.

Role of model structure on the response of soil biogeochemistry to hydro-climatic fluctuations

NASA Astrophysics Data System (ADS)

Manzoni, S.; Porporato, A.

2005-05-01

Soil carbon and nutrient cycles are strongly affected by hydro-climatic variability, which interacts with the internal ecosystem structure. Here we test the implications of biogeochemical model structure on such dynamics by extending an existing model by the authors and coworkers. When forced by hydro-climatic fluctuations, the different model structures induce specific preferential nutrient paths among the soil pools, which in turn affect nutrient distribution and availability to microbes and plants. In particular, if it is assumed that microbes can directly assimilate organic nitrogen, plants tend to be inferior competitors for nutrients even in well-watered conditions, while if a certain amount of organic nitrogen is assumed to be mineralized without being first incorporated into microbial cells, vegetation can be advantaged over a wide range of soil moisture values. We also investigate the intensification of competition for nutrients (e.g., nitrogen) between plant and soil microbial communities under extreme hydrologic conditions, such as droughts and intense storms. Frequent rainfall events may determine ideal soil moisture conditions for plant uptake, enhancing nitrogen leaching while lowering oxygen concentration and inhibiting microbial activity. During droughts, the soil water potential often drops to the point of hampering the plant nutrient uptake while still remaining high enough for microbial decomposition and nitrogen immobilization. The interplay of microbe and vegetation water stress is investigated in depth as it controls the ability of one community (e.g., plants or soil microbes) to establish competitive advantage on the other. The long-term effects of these dynamics of competition and nutrient allocation are explored under steady-state and stochastic soil moisture conditions to analyze the feedbacks between soil organic matter and vegetation dynamics.

Soil greenhouse gas emissions and carbon budgeting in a short-hydroperiod floodplain wetland

NASA Astrophysics Data System (ADS)

Batson, Jackie; Noe, Gregory B.; Hupp, Cliff R.; Krauss, Ken W.; Rybicki, Nancy B.; Schenk, Edward R.

2015-01-01

Understanding the controls on floodplain carbon (C) cycling is important for assessing greenhouse gas emissions and the potential for C sequestration in river-floodplain ecosystems. We hypothesized that greater hydrologic connectivity would increase C inputs to floodplains that would not only stimulate soil C gas emissions but also sequester more C in soils. In an urban Piedmont river (151 km2 watershed) with a floodplain that is dry most of the year, we quantified soil CO2, CH4, and N2O net emissions along gradients of floodplain hydrologic connectivity, identified controls on soil aerobic and anaerobic respiration, and developed a floodplain soil C budget. Sites were chosen along a longitudinal river gradient and across lateral floodplain geomorphic units (levee, backswamp, and toe slope). CO2 emissions decreased downstream in backswamps and toe slopes and were high on the levees. CH4 and N2O fluxes were near zero; however, CH4 emissions were highest in the backswamp. Annual CO2 emissions correlated negatively with soil water-filled pore space and positively with variables related to drier, coarser soil. Conversely, annual CH4 emissions had the opposite pattern of CO2. Spatial variation in aerobic and anaerobic respiration was thus controlled by oxygen availability but was not related to C inputs from sedimentation or vegetation. The annual mean soil CO2 emission rate was 1091 g C m-2 yr-1, the net sedimentation rate was 111 g C m-2 yr-1, and the vegetation production rate was 240 g C m-2 yr-1, with a soil C balance (loss) of -338 g C m-2 yr-1. This floodplain is losing C likely due to long-term drying from watershed urbanization.

Depth dependent microbial carbon use efficiency in the capillary fringe as affected by water table fluctuations in a column incubation experiment

NASA Astrophysics Data System (ADS)

Pronk, G. J.; Mellage, A.; Milojevic, T.; Smeaton, C. M.; Rezanezhad, F.; Van Cappellen, P.

2017-12-01

Microbial growth and turnover of soil organic carbon (SOC) depend on the availability of electron donors and acceptors. The steep geochemical gradients in the capillary fringe between the saturated and unsaturated zones provide hotspots of soil microbial activity. Water table fluctuations and the associated drying and wetting cycles within these zones have been observed to lead to enhanced turnover of SOC and adaptation of the local microbial communities. To improve our understanding of SOC degradation under changing moisture conditions, we carried out an automated soil column experiment with integrated of hydro-bio-geophysical monitoring under both constant and oscillating water table conditions. An artificial soil mixture composed of quartz sand, montmorillonite, goethite and humus was used to provide a well-defined system. This material was inoculated with a microbial community extracted from a forested riparian zone. The soils were packed into 6 columns (60 cm length and 7.5 cm inner diameter) to a height of 45 cm; and three replicate columns were incubated under constant water table while another three were saturated and drained monthly. The initial soil development, carbon cycling and microbial community development were then characterized during 10 months of incubation. This system provides an ideal artificial gradient from the saturated to the unsaturated zone to study soil development from initially homogeneous materials and the same microbial community composition under controlled conditions. Depth profiles of SOC and microbial biomass after 329 days of incubation showed a depletion of carbon in the transition drying and wetting zone that was not associated with higher accumulation of microbial biomass, indicating a lower carbon use efficiency of the microbial community established within the water table fluctuation zone. This was supported by a higher ATP to microbial biomass carbon ratio within the same zone. The findings from this study highlight the importance of considering the effects of transient soil moisture and oxygen availability on microbial mediated SOC transformations. The effects of these changes in carbon use efficiency need to be included in soil models in order to accurately predict SOC turnover.

Role of root exudates in dissolution of Cd containing iron oxides

NASA Astrophysics Data System (ADS)

Rosenfeld, C.; Martinez, C. E.

2011-12-01

Dissolved organic matter (DOM) in the rhizosphere contains organic acids, amino acids and more complex organic molecules that can substantially impact the solubility of soil solid phases. Plant roots and soil microorganisms contribute a large fraction of these organic compounds to DOM, potentially accelerating the transfer of solid phase elements into solution. In highly contaminated soils, heavy metals such as Cd are commonly found coprecipitated with common minerals (e.g. iron oxides). Introducing or changing vegetation on these contaminated soils may increase DOM levels in the soil pore fluids and thus enhance the biological and chemical weathering of soil minerals. Here, we investigate the role of root exudates on mineral dissolution and Cd mobility in contaminated soils. We hypothesize that plant exudates containing nitrogen and sulfur functional groups will dissolve Cd-containing mineral phases to a greater extent than exudates containing only oxygen functional groups, resulting in higher Cd concentrations in solution. Two different iron oxide mineral phases were utilized in a laboratory-scale model study system investigating the effects of low molecular weight, oxygen-, nitrogen-, and sulfur-containing organic compounds on mineral dissolution. Goethite (α-FeOOH) was synthesized in the laboratory with 0, 2.4, 5, and 100 theoretical mol% Cd, and franklinite (ZnFe2O4) was prepared with 0, 10, and 25 theoretical mol% Cd. Phase identity of all minerals was verified with X-ray diffraction (XRD). All minerals were reacted with 0.01 mM solutions containing one of four different organic ligands (oxalic acid, citric acid, histidine or cysteine) and aliquots of these solutions were sampled periodically over 40 days. Results from solution samples suggest that oxalic acid, citric acid, and histidine consistently increase mineral dissolution relative to the control (no organic compound present) while cysteine consistently inhibits dissolution relative to the control in all minerals. Increasing Cd substitution in the franklinite resulted in increased release of Fe and Zn to solution in the presence of these organic compounds, while increasing Cd substitution in the goethite generally limited Fe release to solution. In the case of cysteine, sulfur concentrations in solution decrease over time in the presence of Cd-containing minerals, indicating strong binding of the cysteine compound to the mineral surface, inhibiting Cd dissolution from the minerals. Our work indicates that amino acids present in biological soil exudates, in addition to organic acids, may have substantial impacts on iron oxide dissolution in soils, altering the availability of both bioessential (e.g., Fe and Zn) and non-essential, or potentially toxic, (e.g., Cd) elements.

The role of iron and reactive oxygen species in the production of CO2 in arctic soil waters

NASA Astrophysics Data System (ADS)

Trusiak, Adrianna; Treibergs, Lija A.; Kling, George W.; Cory, Rose M.

2018-03-01

Hydroxyl radical (radOH) is a highly reactive oxidant of dissolved organic carbon (DOC) in the environment. radOH production in the dark was observed through iron and DOC mediated Fenton reactions in natural environments. Specifically, when dissolved oxygen (O2) was added to low oxygen and anoxic soil waters in arctic Alaska, radOH was produced in proportion to the concentrations of reduced iron (Fe(II)) and DOC. Here we demonstrate that Fe(II) was the main electron donor to O2 to produce radOH. In addition to quantifying radOH production, hydrogen peroxide (H2O2) was detected in soil waters as a likely intermediate in radOH production from oxidation of Fe(II). For the first time in natural systems we detected carbon dioxide (CO2) production from radOH oxidation of DOC. More than half of the arctic soil waters tested showed production of CO2 under conditions conducive for production of radOH. Findings from this study strongly suggest that DOC is the main sink for radOH, and that radOH can oxidize DOC to yield CO2. Thus, this iron-mediated, dark chemical oxidation of DOC may be an important component of the arctic carbon cycle.

Combustion characteristics and emissions from burning organic soils

Treesearch

Charles K. McMahon; Dale D. Wade; Skevos N. Tsoukalas

1980-01-01

Organic soils cover many millions of hectares in the United States, including 2.8 million hectares in the Southern United States and about 1.0 million in south Florida. Organic soils form when plants such as pond weeds, grasses, shrubs, and trees die and are covered by water for extended periods. With oxygen excluded, decomposition is very slow. As residues accumulate...

A Potassium-Dependent Oxygen Sensing Pathway Regulates Plant Root Hydraulics.

PubMed

Shahzad, Zaigham; Canut, Matthieu; Tournaire-Roux, Colette; Martinière, Alexandre; Boursiac, Yann; Loudet, Olivier; Maurel, Christophe

2016-09-22

Aerobic organisms survive low oxygen (O2) through activation of diverse molecular, metabolic, and physiological responses. In most plants, root water permeability (in other words, hydraulic conductivity, Lpr) is downregulated under O2 deficiency. Here, we used a quantitative genetics approach in Arabidopsis to clone Hydraulic Conductivity of Root 1 (HCR1), a Raf-like MAPKKK that negatively controls Lpr. HCR1 accumulates and is functional under combined O2 limitation and potassium (K(+)) sufficiency. HCR1 regulates Lpr and hypoxia responsive genes, through the control of RAP2.12, a key transcriptional regulator of the core anaerobic response. A substantial variation of HCR1 in regulating Lpr is observed at the Arabidopsis species level. Thus, by combinatorially integrating two soil signals, K(+) and O2 availability, HCR1 modulates the resilience of plants to multiple flooding scenarios. Copyright © 2016 Elsevier Inc. All rights reserved.

Ecophysiology of wetland plant roots: A modelling comparison of aeration in relation to species distribution

USGS Publications Warehouse

Sorrell, B.K.; Mendelssohn, I.A.; McKee, K.L.; Woods, R.A.

2000-01-01

This study examined the potential for inter-specific differences in root aeration to determine wetland plant distribution in nature. We compared aeration in species that differ in the type of sediment and depth of water they colonize. Differences in root anatomy, structure and physiology were applied to aeration models that predicted the maximum possible aerobic lengths and development of anoxic zones in primary adventitious roots. Differences in anatomy and metabolism that provided higher axial fluxes of oxygen allowed deeper root growth in species that favour more reducing sediments and deeper water. Modelling identified factors that affected growth in anoxic soils through their effects on aeration. These included lateral root formation, which occurred at the expense of extension of the primary root because of the additional respiratory demand they imposed, reducing oxygen fluxes to the tip and stele, and the development of stelar anoxia. However, changes in sediment oxygen demand had little detectable effect on aeration in the primary roots due to their low wall permeability and high surface impedance, but appeared to reduce internal oxygen availability by accelerating loss from laterals. The development of pressurized convective gas flow in shoots and rhizomes was also found to be important in assisting root aeration, as it maintained higher basal oxygen concentrations at the rhizome-root junctions in species growing into deep water. (C) 2000 Annals of Botany Company.

Utilization of vinasses as soil amendment: consequences and perspectives.

PubMed

Moran-Salazar, R G; Sanchez-Lizarraga, A L; Rodriguez-Campos, J; Davila-Vazquez, G; Marino-Marmolejo, E N; Dendooven, L; Contreras-Ramos, S M

2016-01-01

Vinasses are a residual liquid generated after the production of beverages, such as mezcal and tequila, from agave (Agave L.), sugarcane (Saccharum officinarum L.) or sugar beet (Beta vulgaris L.). These effluents have specific characteristics such as an acidic pH (from 3.9 to 5.1), a high chemical oxygen demand (50,000-95,000 mg L(-1)) and biological oxygen demand content (18,900-78,300 mg L(-1)), a high total solids content (79,000 and 37,500 mg L(-1)), high total volatile solids 79,000 and 82,222 mg L(-1), and K(+) (10-345 g L(-1)) content. Vinasses are most commonly discarded onto soil. Irrigation of soil with vinasses, however, may induce physical, chemical and biochemical changes and affect crop yields. Emission of greenhouse gases (GHG), such as carbon dioxide, nitrous oxide and methane, might increase from soils irrigated with vinasses. An estimation of GHG emission from soil irrigated with vinasses is given and discussed in this review.

Chromium speciation, bioavailability, uptake, toxicity and detoxification in soil-plant system: A review.

PubMed

Shahid, Muhammad; Shamshad, Saliha; Rafiq, Marina; Khalid, Sana; Bibi, Irshad; Niazi, Nabeel Khan; Dumat, Camille; Rashid, Muhammad Imtiaz

2017-07-01

Chromium (Cr) is a potentially toxic heavy metal which does not have any essential metabolic function in plants. Various past and recent studies highlight the biogeochemistry of Cr in the soil-plant system. This review traces a plausible link among Cr speciation, bioavailability, phytouptake, phytotoxicity and detoxification based on available data, especially published from 2010 to 2016. Chromium occurs in different chemical forms (primarily as chromite (Cr(III)) and chromate (Cr(VI)) in soil which vary markedly in term of their biogeochemical behavior. Chromium behavior in soil, its soil-plant transfer and accumulation in different plant parts vary with its chemical form, plant type and soil physico-chemical properties. Soil microbial community plays a key role in governing Cr speciation and behavior in soil. Chromium does not have any specific transporter for its uptake by plants and it primarily enters the plants through specific and non-specific channels of essential ions. Chromium accumulates predominantly in plant root tissues with very limited translocation to shoots. Inside plants, Cr provokes numerous deleterious effects to several physiological, morphological, and biochemical processes. Chromium induces phytotoxicity by interfering plant growth, nutrient uptake and photosynthesis, inducing enhanced generation of reactive oxygen species, causing lipid peroxidation and altering the antioxidant activities. Plants tolerate Cr toxicity via various defense mechanisms such as complexation by organic ligands, compartmentation into the vacuole, and scavenging ROS via antioxidative enzymes. Consumption of Cr-contaminated-food can cause human health risks by inducing severe clinical conditions. Therefore, there is a dire need to monitor biogeochemical behavior of Cr in soil-plant system. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effect of long-term organic fertilization on the soil pore characteristics of greenhouse vegetable fields converted from rice-wheat rotation fields.

PubMed

Xu, L Y; Wang, M Y; Shi, X Z; Yu, Q B; Shi, Y J; Xu, S X; Sun, W X

2018-08-01

The shift from rice-wheat rotation (RWR) to greenhouse vegetable soils has been widely practiced in China. Several studies have discussed the changes in soil properties with land-use changes, but few studies have sought to address the differences in soil pore properties, especially for fields based on long-term organic fertilization under greenhouse vegetable system from RWR fields. This study uses the X-ray computed tomography (CT) scanning and statistical analysis to compare the long-term effects of the conversion of organic greenhouse vegetable fields (over one year, nine years, and fourteen years) from RWR fields on the soil macropore structure as well as the influencing factors from samples obtained in Nanjing, Jiangsu, China, using the surface soil layer and triplicate samples. The results demonstrated that the macropore structure became more complex and stable, with a higher connectivity, fractal dimension (FD) and a lower degree of anisotropy (DA), as the greenhouse vegetable planting time increased. The total topsoil macroporosity increased considerably, but the rate of increase gradually decelerated with time. The transmission pores (round pores ranging from 50 to 500μm) increased with time, but the biopores (>2000μm) clearly decreased after nine years of use as greenhouse vegetable fields. Soil organic matter (OM) has a significant relationship with the soil pore structure characteristics, especially for the transmission pores. In addition, organic fertilization on the topsoil had a short-term effect on the pores, but the effect stabilized and had a weak influence on the pores over longer periods. These results suggested that organic fertilization was conducive for controlling soil degradation regarding it physical quality for water and oxygen availability in the short term. Copyright © 2018 Elsevier B.V. All rights reserved.

Reduced dry season transpiration is coupled with shallow soil water use in tropical montane forest trees.

PubMed

Muñoz-Villers, Lyssette E; Holwerda, Friso; Alvarado-Barrientos, M Susana; Geissert, Daniel R; Dawson, Todd E

2018-06-25

Tropical montane cloud forests (TMCF) are ecosystems particularly sensitive to climate change; however, the effects of warmer and drier conditions on TMCF ecohydrology remain poorly understood. To investigate functional responses of TMCF trees to reduced water availability, we conducted a study during the 2014 dry season in the lower altitudinal limit of TMCF in central Veracruz, Mexico. Temporal variations of transpiration, depth of water uptake and tree water sources were examined for three dominant, brevi-deciduous species using micrometeorological, sap flow and soil moisture measurements, in combination with oxygen and hydrogen stable isotope composition of rainfall, tree xylem, soil and stream water. Over the course of the dry season, reductions in crown conductance and transpiration were observed in canopy species (43 and 34%, respectively) and mid-story trees (23 and 8%), as atmospheric demand increased and soil moisture decreased. Canopy species consistently showed more depleted isotope values compared to mid-story trees. However, MixSIAR Bayesian model results showed that the evaporated (enriched) soil water pool was the main source for trees despite reduced soil moisture. Additionally, while increases in tree water uptake from deeper to shallower soil water sources occurred, concomitant decreases in transpiration were observed as the dry season progressed. A larger reduction in deep soil water use was observed for canopy species (from 79 ± 19 to 24 ± 20%) compared to mid-story trees (from 12 ± 17 to 10 ± 12%). The increase in shallower soil water sources may reflect a trade-off between water and nutrient requirements in this forest.

Conservation Management of Agriculture Land using Geospatial Approach (A Case Study in the Bone Watershed, Gorontalo Province, Indonesia)

NASA Astrophysics Data System (ADS)

Maryati, Sri; Eraku, Sunarty; Kasim, Muh

2018-02-01

Bone Watershed is one of the major watersheds in Gorontalo Province. Bone watershed has a very important role for the people of Gorontalo Province. The role of Bone Watershed is mainly related to the providing clean water, producing oxygen, controlling flood, providing habitat for endemic flora fauna and other environmental functions. The role of Bone Watershed for the community's economic sector is also very important, the Bone watershed provides livelihood for surrounding communities includes fertile land resources for agriculture and plantations, forest products, and livestock feed. This research is important considering the Bone watershed has limited availability of land for agriculture and the high risk of natural disasters such as floods and landslides. Geospatial data includes topography map, landform map, soil map, integrated with field survey results and soil properties were analized to determine conservation management of agriculture land in the Bone Watershed, Gorontalo Province, Indonesia. The result of this study shows that based on soil properties and physical land characteristics, land use for agriculture should consider appropriate conservation techniques, land capability and respect to local wisdom.

Identification of persulfate oxidation products of polycyclic aromatic hydrocarbon during remediation of contaminated soil

EPA Science Inventory

The extent of PAH transformation, the formation and transformation of reaction byproducts during persulfate oxidation of polycyclic aromatic hydrocarbons (PAHs) in coking plant soil was investigated. Pre-oxidation analyses indicated that oxygen-containing PAHs (oxy-PAHs) existed ...

Taurus Littrow Pyroclastic Deposit-An Optimum Feedstock for Lunar Oxygen

NASA Technical Reports Server (NTRS)

Allen, Carlton C.

2014-01-01

Future human habitation of the Moon will likely require the use of locally derived materials because of the high cost of transportation from Earth. Oxygen, extracted from oxides and silicates, is a potentially abundant lunar resource vital for life support and spacecraft propulsion. The anticipated costs of supplying all oxygen needs for a lunar base from Earth are high enough to warrant serious study of oxygen production from local resources. Over 20 different processes have been proposed for oxygen production on the Moon. Among the simplest and best studied of these processes is the reduction of oxides in lunar minerals and glass using hydrogen gas. Oxygen can be extracted from lunar soils and pyroclastic glass beads by exposing the samples to flowing hydrogen at subsolidus temperatures (approx. 1050 C). Total oxygen yield is directly correlated to the sample's abundance of FeO, but is not correlated to the abundance of any other oxide. Oxygen is extracted predominantly from FeO, with lesser contributions from TiO2 and SiO2. Oxygen yield is independent of soil maturity. All major FeO-bearing phases contribute oxygen, with extraction from ilmenite and glass significantly more efficient than from olivine and pyroxene. This study demonstrates that the optimum location for a lunar resources demonstration mission can be identified, and that the oxygen yield can be predicted, using a combination of high-resolution imaging and thermal-infrared data. A mission to Taurus Littrow will encounter a deposit at least 10 m in depth with few landing hazards, a uniform composition, and a predicted oxygen yield of approximately 3 wt. %, among the highest values on the Moon.

Biochar application for the remediation of salt-affected soils: Challenges and opportunities.

PubMed

Saifullah; Dahlawi, Saad; Naeem, Asif; Rengel, Zed; Naidu, Ravi

2018-06-01

Soil salinization and sodification are two commonly occurring major threats to soil productivity in arable croplands. Salt-affected soils are found in >100 countries, and their distribution is extensive and widespread in arid and semi-arid regions of the world. In order to meet the challenges of global food security, it is imperative to bring barren salt-affected soils under cultivation. Various inorganic and organic amendments are used to reclaim the salt-affected lands. The selection of a sustainable ameliorant is largely determined by the site-specific geographical and soil physicochemical parameters. Recently, biochar (solid carbonaceous residue, produced under oxygen-free or oxygen-limited conditions at temperatures ranging from 300 to 1000°C) has attracted considerable attention as a soil amendment. An emerging pool of knowledge shows that biochar addition is effective in improving physical, chemical and biological properties of salt-affected soils. However, some studies have also found an increase in soil salinity and sodicity with biochar application at high rates. Further, the high cost associated with production of biochar and high application rates remains a significant challenge to its widespread use in areas affected by salinity and sodicity. Moreover, there is relatively limited information on the long-term behavior of salt-affected soils subjected to biochar applications. The main objective of the present paper was to review, analyze and discuss the recent studies investigating a role of biochar in improving soil properties and plant growth in salt-affected soils. This review emphasizes that using biochar as an organic amendment for sustainable and profitable use of salt-affected soils would not be practicable as long as low-cost methods for the production of biochar are not devised. Copyright © 2017 Elsevier B.V. All rights reserved.

Membrane transporters mediating root signalling and adaptive responses to oxygen deprivation and soil flooding.

PubMed

Shabala, Sergey; Shabala, Lana; Barcelo, Juan; Poschenrieder, Charlotte

2014-10-01

This review provides a comprehensive assessment of a previously unexplored topic: elucidating the role that plasma- and organelle-based membrane transporters play in plant-adaptive responses to flooding. We show that energy availability and metabolic shifts under hypoxia and anoxia are critical in regulating membrane-transport activity. We illustrate the high tissue and time dependence of this regulation, reveal the molecular identity of transporters involved and discuss the modes of their regulation. We show that both reduced oxygen availability and accumulation of transition metals in flooded roots result in a reduction in the cytosolic K(+) pool, ultimately determining the cell's fate and transition to programmed cell death (PCD). This process can be strongly affected by hypoxia-induced changes in the amino acid pool profile and, specifically, ϒ-amino butyric acid (GABA) accumulation. It is suggested that GABA plays an important regulatory role, allowing plants to proceed with H2 O2 signalling to activate a cascade of genes that mediate plant adaptation to flooding while at the same time, preventing the cell from entering a 'suicide program'. We conclude that progress in crop breeding for flooding tolerance can only be achieved by pyramiding the numerous physiological traits that confer efficient energy maintenance, cytosolic ion homeostasis, and reactive oxygen species (ROS) control and detoxification. © 2014 John Wiley & Sons Ltd.

Filling the gap for phosphorus tracing in the eco-hydrological system: are oxygen stable isotopes in phosphate a possible tool?

NASA Astrophysics Data System (ADS)

Stamm, C.; Tamburini, F.; Hahn, C.; Stadelmann, F.; Bernasconi, S. M.; Frossard, E.

2011-12-01

Phosphorus is a limiting nutrient in many ecosystems. However, freshwater systems are experiencing nutrient overload and consequent eutrophication, caused mainly by a poor use of resources and in many situations by the input of a surplus of nutrients from agriculture. The sources of nutrient pollution together with the fate of the nutrients once in the water system need to be identified and understood, so that a better management can be implemented. There are multiple agricultural P-sources like mineral fertilizers, animal excreta, plant residues, soils, and since P has only one stable isotope, no analytical method allows to directly distinguishing P from its different possible source. However, the isotopic signature of oxygen associated to phosphate (δ18O-P) has been considered to be a promising tool for such source tracing in the environment. The main limitation of using this tool as a tracer is that biological activity could erase the original source signature, which is overprinted by a temperature dependent equilibration with oxygen in water. We present data from the region of Lake Baldegg (Central Switzerland), which is characterized by a high animal density (dairy cows, pigs) and intensive grassland cultivation. P losses from the grasslands constitute the main source of P for the freshwater system. Using δ18O-P, we have first characterized animal manure, soil available P, and plant P, the three main possible Pi sources to the system, and we have determined the δ18O-P of three brooks at different time points. Phosphorus concentration, oxygen isotopic composition of water and temperature were also monitored. The three sources of P showed well distinct signatures, with values from animal manures and plants being 12% and higher than 20%, respectively. Depending on the time of sampling, the δ18O-P in the brooks showed deviations from the expected equilibrium, pointing to a contribution of P coming from animal manure. Data from runoff experiments in the same region showed an inverse correlation between δ18O-P in runoff water and P concentration in the soil. This indicated that manure P contributed directly to P mobilized into the surface runoff. The presented results, together with the outcome of other recent studies, indicate the usefulness and potentiality of δ18O-P a tracer for P in hydrological systems.

Bio-ISRU Concepts using microorganisms to release O2 and H2 on Moon and Mars

NASA Astrophysics Data System (ADS)

Slenzka, Klaus; Kempf, Juergen

Since space exploration missions begun, numerous spacecrafts were sent to space for examina-tion of other planets. One limiting factor of the endurance of such missions is the unlasting energy supply to run devices and motors of the space crafts as well as for locally habitats. The high weight and volume of fuels makes embedding of local resources necessary to allow ex-tension to long term missions. Nature demonstrates how to survive in extreme environments. Some more adapted microorganisms like Chlamydomonas reinhardii even release elementary hydrogen from water under special nutrition which might be used to run fuel cells and provide electric energy. The same organism release oxygen by photosysthesis under standard nutrition, the counterpart of hydrogen to operate fuel cells. Planets of interest are covered by potential toxic soil called "Regolith". Lunar regolith is known to be extremely aggressive and inhibit cells grows not only due to its sharp edges. First studies on lunar soil simulant tolerance of Chl.reinhardii have shown promising results. The single cells surround the substrate without any negative influence. A 3-dimensional tissue like matrix was build by the proliferating now adhering micro algae cells and the substrate. The photosynthesis rate was not negatively in-fluenced by the soil. This enables Chl.reinhardii to become a first settler organism of the lunar surface. Maybe a first step of terraforming to allow the growth of higher organisms. Lunar soil regolith consists of several components. Especially in minerals bound oxygen plays an out-standing role for industrial use. Some microorganisms of the proteobacteria type are reducing ferroxides to gain oxygen under anaerobic conditions while they produce electric energy simul-taneously. For a faster electron transfer the Shewanella bacteria built filamentous nanowire-like structures to connect one cell to the other. A bioreactor hosting specific microorganism might be run to provide oxygen to the life support system embedded in a permanent Moon or Mars base. This method demonstrates a low energetic oxygen release, a serious alternative to high the energetic oxygen separation of the ilmenite process, fluorination process, melting hydrol-ysis, vacuum distillation or photo dissociation, respectively. Not only oxygen production of the biological processes should be in focus of space application. Also the metal oxide reducing component of the process might run batteries to provide energy to devices of a Moon or Mars base.

Selected soil enzyme activities in an oak-hickory forest following long-term prescribed burning

Treesearch

M. R. Bayan; F. Eivazi

1993-01-01

The biochemical reactions within the soil are mediated by soil flora and fauna, and are catalyzed by enzymes. Therefore, enzymes play a significant role in nutrient cycling. Enzymes are specific for the type of chemical reactions in which they participate. Arylsulfatase is the enzyme that catalyzes the hydrolysis of an arylsulfate anion by fission of the oxygen-sulfur...

FOREST SOIL CARBON SEQUESTRATION: ACCOUNTING FOR THIS VITAL ECOSYSTEM SERVICE

EPA Science Inventory

Forests play a crucial role in supplying many goods and services that society depends upon on a daily basis including water supply, production of oxygen, soil protection, building materials, wildlife habitat and recreation. Forests also provide a significant amount of carbon seq...

The dependence of the discharge of nitrous oxide by ordinary chernozem steppe of the Central-Chernozem Region of Russia from the content of humus, nitrogen and enzymatic activity

NASA Astrophysics Data System (ADS)

Avksentev, Alexey; Negrobova, Elena; Kramareva, Tatiana; Moiseeva, Evgenya

2016-04-01

The dependence of the discharge of nitrous oxide by ordinary chernozem steppe of the Central-Chernozem Region of Russia from the content of humus, nitrogen and enzymatic activity Alexey Avksentev, Elena Negrobova, Tatiana Kramareva, Evgenya Moiseeva 394000 Voronezh, Universitetskaya square, 1 Voronezh State University Nitrous oxide is emitted by soil as a result of microbiological processes, ranks third in the list of aggressive greenhouse gas after carbon dioxide and methane. Nitrous oxide is formed during nitrification and denitrification of ammonia that enters the soil during microbial decomposition of complex organic compounds. Denitrification can be direct and indirect. In the microbiological process of recovery of nitrates involved of the organic substance. In aerobic conditions microorganisms denitrificator behave like normal saprotrophs and oxidize organic matter in the act of breathing oxygen. Thus, they operate at different times two enzyme systems: the electron transport chain with an oxygen acceptor in aerobic and restoration of nitrates under anaerobic conditions. Investigation of the emission of nitrous oxide by ordinary Chernozem steppe of the Central-Chernozem Region showed that it depends on the type of cenosis and the content of available forms of nitrogen. Natural ecosystems emit nitrous oxide more than the soil of arable land. The dependence of the emission of nitrous oxide from the humus content shows positive trend, but the aggregation of data, significant differences are not detected. Research shows that nitrous oxide emissions are seasonal. So the autumn season is characterized by nitrous oxide emissions than spring. Enzymatic processes are an important link in the biological cycle of elements and, consequently, participate in the process of decomposition of organic matter, nitrification and other processes. Analysis of the data on enzyme activity of ordinary Chernozem and the intensity of emission of N20 shows a clear relationship between invertase, urease activity and emission of nitrous oxide, which is confirmed by the correlation coefficient R=0,78-0,79. Analysis of data on physical characteristics of common Chernozem shows that the relationship between nitrous oxide emissions and the density of the solid phase of the soil and the density of the composition of the soil and total porosity is not significant (R=0.4) and is not limiting. A limiting factor of N20 flux from ordinary Chernozem is the presence of available forms of nitrogen.

Freeze-Thaw Cycles and Soil Biogeochemistry: Implications for Greenhouse Gas emission

NASA Astrophysics Data System (ADS)

Rezanezhad, F.; Milojevic, T.; Oh, D. H.; Parsons, C. T.; Smeaton, C. M.; Van Cappellen, P.

2016-12-01

Freeze-thaw cycles represent a major natural climate forcing acting on soils at middle and high latitudes. Repeated freezing and thawing of soils changes their physical properties, geochemistry, and microbial community structure, which together govern the biogeochemical cycling of carbon and nutrients. In this presentation, we focus on how freeze-thaw cycles regulate carbon and nitrogen cycling and how these transformations influence greenhouse gas (GHG) fluxes. We present a novel approach, which combines the acquisition of physical and chemical data in a newly developed experimental soil column system. This system simulates realistic soil temperature profiles during freeze-thaw cycles. A high-resolution, Multi-Fiber Optode (MuFO) microsensor technique was used to detect oxygen (O2) continuously in the column at multiple depths. Surface and subsurface changes to gas and aqueous phase chemistry were measured to delineate the pathways and quantify soil respiration rates during freeze-thaw cycles. The results indicate that the time-dependent release of GHG from the soil surface is influenced by a combination of two key factors. Firstly, fluctuations in temperature and O2 availability affect soil biogeochemical activity and GHG production. Secondly, the recurrent development of a physical ice barrier prevents exchange of gaseous compounds between the soil and atmosphere during freezing conditions; removal of this barrier during thaw conditions increases GHG fluxes. During freezing, O2 levels in the unsaturated zone decreased due to restricted gas exchange with the atmosphere. As the soil thawed, O2 penetrated deeper into the soil enhancing the aerobic mineralization of organic carbon and nitrogen. Additionally, with the onset of thawing a pulse of gas flux occurred, which is attributed to the build-up of respiratory gases in the pore space during freezing. The latter implies enhanced anaerobic respiration as O2 supply ceases when the upper soil layer freezes.

Influence of Oxygen and Nitrate on Fe (Hydr)oxide Mineral Transformation and Soil Microbial Communities during Redox Cycling.

PubMed

Mejia, Jacqueline; Roden, Eric E; Ginder-Vogel, Matthew

2016-04-05

Oscillations between reducing and oxidizing conditions are observed at the interface of anaerobic/oxic and anaerobic/anoxic environments, and are often stimulated by an alternating flux of electron donors (e.g., organic carbon) and electron acceptors (e.g., O2 and NO3(-)). In iron (Fe) rich soils and sediments, these oscillations may stimulate the growth of both Fe-reducing bacteria (FeRB) and Fe-oxidizing bacteria (FeOB), and their metabolism may induce cycling between Fe(II) and Fe(III), promoting the transformation of Fe (hydr)oxide minerals. Here, we examine the mineralogical evolution of lepidocrocite and ferrihydrite, and the adaptation of a natural microbial community to alternating Fe-reducing (anaerobic with addition of glucose) and Fe-oxidizing (with addition of nitrate or air) conditions. The growth of FeRB (e.g., Geobacter) is stimulated under anaerobic conditions in the presence of glucose. However, the abundance of these organisms depends on the availability of Fe(III) (hydr)oxides. Redox cycling with nitrate results in decreased Fe(II) oxidation thereby decreasing the availability of Fe(III) for FeRB. Additionally, magnetite is detected as the main product of both lepidocrocite and ferrihydrite reduction. In contrast, introduction of air results in increased Fe(II) oxidation, increasing the availability of Fe(III) and the abundance of Geobacter. In the lepidocrocite reactors, Fe(II) oxidation by dissolved O2 promotes the formation of ferrihydrite and lepidocrocite, whereas in the ferrihydrite reactors we observe a decrease in magnetite stoichiometry (e.g., oxidation). Understanding Fe (hydr)oxide transformation under environmentally relevant redox cycling conditions provides insight into nutrient availability and transport, contaminant mobility, and microbial metabolism in soils and sediments.

[Water utilization characteristics of the degraded poplar shelterbelts in Zhangbei, Hebei, China.

PubMed

Zhang, Huan; Cao, Jun; Wang, Hua Bing; Song, Bo; Jia, Guo Dong; Liu, Zi Qiang; Yu, Xin Xiao; Zeng, Jia

2018-05-01

In Zhangbei County, Hebei Province, poplar-dominated shelterbelts are degraded to different extents. Water availability is the main limiting factor for plant survival in arid areas. The purpose of this study was to reveal the relationship between water availability and poplar degradation. Based on the hydrogen and oxygen stable isotope techniques, we explored the water sources of Populus simonii under different degradation degrees by comparing the isotopic values of P. simonii xylem water with that in potential water source, and calculated the utilization ratio of each water source. The results showed that the water sources of poplar trees varied with degradation degree. The water sources of P. simonii gradually transferred from the deep layer to the surface layer with the increases of degradation. P. simonii with no degradation mainly absorbed soil water in the range of 320-400 cm, with the utilization rate being 25.1%. P. simonii with slight degradation mainly used soil water at depth of 120-180, 180-240 and 240-320 cm. The total utilization rate of three layers was close to 50.0%, with less utilization of water from other layers. The moderately degraded P. simonii mainly used soil water at depth of 20-40, 40-60 and 60-80 cm. The utilization rate of each layer was 17.5%-20.9%, and the contribution rate of soil water under 120 cm was less than 10.0%. The severely degraded P. simonii mainly used water from surface soil layer (0-20 cm), with the utilization rate being 30.4%, which was significantly higher than that of other water sources. The water sources of poplar shelter forests were gradually shallower during the process of degradation. However, the low soil water content in the shallow layer could not meet the normal water demand of poplar, which would accelerate the degradation and even decline of poplar.

Dissolved oxygen and its response to eutrophication in a tropical black water river.

PubMed

Rixen, Tim; Baum, Antje; Sepryani, Harni; Pohlmann, Thomas; Jose, Christine; Samiaji, Joko

2010-08-01

The Siak is a typical, nutrient-poor, well-mixed, black water river in central Sumatra, Indonesia, which owes its brown color to dissolved organic matter (DOM) leached from surrounding, heavily disturbed peat soils. We measured dissolved organic carbon (DOC) and oxygen concentrations along the river, carried out a 36-h experiment in the province capital Pekanbaru and quantified organic matter and nutrient inputs from urban wastewater channels into the Siak. In order to consider the complex dynamic of oxygen in rivers, a box-diffusion model was used to interpret the measured data. The results suggest that the decomposition of soil derived DOM was the main factor influencing the oxygen concentration in the Siak which varied between approximately 100 and 140 micromol l(-1). Additional DOM input caused by wastewater discharges appeared to reduce the oxygen concentrations by approximately 20 micromol l(-1) during the peak-time in household water use in the early morning and in the early evening. Associated enhanced nutrient inputs appear to reduce the impact of the anthropogenic DOM by favoring the photosynthetic production of oxygen in the morning. A reduction of 20 micromol l(-1), which although perhaps not of great significance in Pekanbaru, has strong implications for wastewater management in the fast developing areas downstream Pekanbaru where oxygen concentrations rarely exceed 20 micromol l(-1). Copyright 2010 Elsevier Ltd. All rights reserved.

Biochar, Tool for Climate Change Mitigation and Soil Management

NASA Astrophysics Data System (ADS)

Shackley, Simon; Sohi, Saran; Ibarrola, Rodrigo; Hammond, Jim; Mašek, Ondřej; Brownsort, Peter; Cross, Andrew; Prendergast-Miller, Miranda; Haszeldine, Stuart

Biochar is the solid remains of any organic material that has been heated to at least 350oC in a zero-oxygen or oxygen-limited environment, which is intended to be mixed with soils. If the solid remains are not suitable for addition to soils, or will be burned as a fuel or used as an aggregate in construction, it is defined as char not biochar. There is a very wide range of potential biochar feedstocks, e.g., wood waste, timber, agricultural residues and wastes (straws, bagasse, manure, husks, shells, fibers, etc.), leaves, food wastes, paper and sewage sludge, green waste, distiller's grain, and many others. Pyrolysis is usually the technology of choice for producing biochar, though biomass gasification also produces smaller char yields. Syngas and pyrolytic bio-liquids, which have a potential use as energy carriers, are produced alongside biochar.

Chloropicrin emission reduction by soil amendment with biochar

USDA-ARS?s Scientific Manuscript database

Biochar is the carbon-enriched and porous material produced by heating organic material under conditions of limited or no oxygen. As biochar has a large surface area and strong sorption capacity, it can enhance the sequestration of organic contaminants such as pesticides in soil. Chloropicrin (CP) i...

Biochar: A soil amendment worth considering

USDA-ARS?s Scientific Manuscript database

Biochar is a fine-grained, carbon enriched product created when biomass (e.g. wood waste, manures) is burned at relatively low temperatures (less than 1300oF) and under an anoxic (lack of oxygen) atmosphere. The benefits of biochar addition to soils have long since been recognized. Amazonian dark ...

Iron addition to soil specifically stabilized lignin

Treesearch

Steven J. Hall; Whendee L. Silver; Vitaliy I. Timokhin; Kenneth E. Hammel

2016-01-01

The importance of lignin as a recalcitrant constituent of soil organic matter (SOM) remains contested. Associations with iron (Fe) oxides have been proposed to specifically protect lignin from decomposition, but impacts of Fe-lignin interactions on mineralization rates remain unclear. Oxygen (O2) fluctuations characteristic of humid tropical...

Denitrification nitrogen gas formation and gene expression in alpine grassland soil as affected by climate change conditions

NASA Astrophysics Data System (ADS)

Chen, Zhe; Wang, Changhui; Gschwendtner, Silvia; Schloter, Michael; Butterbach-Bahl, Klaus; Dannenmann, Michael

2013-04-01

Due to methodological problems, reliable data on soil dinitrogen (N2) emission by denitrification are extremely scarce, and the impacts of climate change on nitrogen (N) gas formation by denitrification and N gas product ratios as well as the underlying microbial drivers remain unclear. We combined the helium-gas-flow-soil-core technique for simultaneously quantification of nitrous oxide (N2O) and N2 emission with the reverse transcript qPCR technology. Our goals were to characterize denitrification dynamics and N gas product ratios in alpine grassland soil as affected by climate change conditions and to evaluate relationships between denitrification gene expression and N gas emission. We used soils from the pre-alpine grassland Terrestrial Environmental Observatory (TERENO), exposed to ambient temperature and precipitation (control treatment), or three years of simulated climate change conditions (increased temperature, reduction of summer precipitation and reduced snow cover). Soils were amended with glucose and nitrate and incubated subsequently at 1) 5°C and 20% oxygen; 2) 5°C and 0% oxygen; 3) 20°C and 0% oxygen until stabilization of N gas emissions in each incubation step. After switching incubation conditions to 0% oxygen and 20°C, N2O emission peaked immediately and declined again, followed by a delayed peak in N2 emission. The dynamics of cnorB gene expression, encoding the reduction of nitric oxide (NO) to N2O, followed the N2O emission pattern, while nosZ gene expression, encoding N2O reduction to N2 followed the course of N2 emission. The mean N2O:N2 ratios were 1.31 + 0.10 and 1.56 + 0.16 for control and climate change treatment respectively, but the denitrification potential was overall lower in climate change treatment. Hence, simulated climate change promoted N2O but lessened N2 emission. This stimulation of N2O was in accordance with increased cnorB gene expression in soil of the climate change treatment. N mass balance calculations revealed that denitrification N gas formation accounted for 21%, dissimilatory nitrate reduction to ammonium for 8%, and microbial immobilization for 73% of nitrate consumption. Overall, our study shows that changes in climate exert feedback on denitrification N gas formation and N gas product ratios via changes in microbial activity at the level of single denitrification steps. The close relationships found between denitrification N gas formation, N gas product ratios and denitrification gene expression suggests a large potential of molecular methods to predict denitrification dynamics in soil.

The oxidation of Cr(III) to Cr(VI) in the environment by atmospheric oxygen during the bush fires.

PubMed

Panichev, N; Mabasa, W; Ngobeni, P; Mandiwana, K; Panicheva, S

2008-05-30

The presence of Cr(VI) in soils and plants of remote unpolluted areas can be explained by partial oxidation of Cr(III) with atmospheric oxygen during seasonable bush fires, which are rather frequent event in South Africa. Experiments with thermal treatment of a veld grass, Hyperthelia dissoluta, in muffle furnace at high temperature, followed by electrothermal atomic absorption spectrometry (ETAAS) determination of chromium, show a remarkable increase in Cr(VI) concentration from initial 2.5 to 23.2% after the treatment of grass ash at 500 degrees C and to 58.1% at 900 degrees C. Before ETAAS determination, the two chromium species of interest were separated by the treatment of samples with 0.1M Na2CO3. Thermodynamic calculations confirm the possibility of Cr(III) to Cr(VI) oxidation with atmospheric oxygen at high temperature in alkaline media, which is typical for vegetation ash. Analysis of field samples show that percent of Cr(VI), in respect to the total amount of chromium increased from initial 2.5% in grass to 9.3% in ash of grass. Without oxidation the percent of Cr(VI) in grass and ash of grass should be a constant value. After the fire Cr(VI) concentration in top soil (0-3 cm) increased from 0.3+/-0.05 to 1.8+/-0.5 microg g(-1) and the total Cr from 26+/-9 to 69+/-14 microg g(-1). The reason for the appearance of additional amount of Cr on top soil can be explained by condensation of chromium species from flame and shouldering ash on a soil surface. The results of studies demonstrate that Cr(VI) is formed by Cr(III) oxidation with atmospheric oxygen at high temperature during bush fires.

Spatial distribution of jet fuel in the vadoze zone of a heterogeneous and fractured soil.

PubMed

Tzovolou, D N; Benoit, Y; Haeseler, F; Klint, K E; Tsakiroglou, C D

2009-04-01

The goal of the present work is to screen and evaluate all available data before selecting and testing remediation technologies on heterogeneous soils polluted by jet fuel. The migration pathways of non-aqueous phase liquids (NAPLs) in the subsurface relate closely with soil properties. A case study is performed on the vadoze zone of a military airport of north-west Poland contaminated by jet fuel. Soil samples are collected from various depths of two cells, and on-site and off-site chemical analyses of hydrocarbons are conducted by using Pollut Eval apparatus and GC-MS, respectively. The geological conceptual model of the site along with microscopic and hydraulic properties of the porous matrix and fractures enable us to interpret the non-uniform spatial distribution of jet fuel constituents. The total concentration of the jet fuel and its main hydrocarbon families (n-paraffins, major aromatics) over the two cells is governed by the slow preferential flow of NAPL through the porous matrix, the rapid NAPL convective flow through vertical desiccation and sub-horizontal glaciotectonic fractures, and n-paraffin biodegradation in upper layers where the rates of oxygen transfer is not limited by complexities of the pore structure. The information collected is valuable for the selection, implementation and evaluation of two in situ remediation methods.

Contrasting water use pattern of introduced and native plants in an alpine desert ecosystem, Northeast Qinghai-Tibet Plateau, China.

PubMed

Wu, Huawu; Li, Xiao-Yan; Jiang, Zhiyun; Chen, Huiying; Zhang, Cicheng; Xiao, Xiong

2016-01-15

Plant water use patterns reflect the complex interactions between different functional types and environmental conditions in water-limited ecosystems. However, the mechanisms underlying the water use patterns of plants in the alpine desert of the Qinghai-Tibet Plateau remain poorly understood. This study investigated seasonal variations in the water sources of herbs (Carex moorcroftii, Astragalus adsurgens) and shrubs (Artemisia oxycephala, Hippophae rhamnoides) using stable oxygen-18 isotope methods. The results indicated that the native herbs (C. moorcroftii, A. adsurgens) and one of the shrubs (A. oxycephala) mainly relied on water from the shallow layer (0-30 cm) throughout the growing season, while the introduced shrub (H. rhamnoides) showed plasticity in switching between water from shallow and deep soil layers depending on soil water availability. All studied plants primarily depended on water from shallow soil layers early in the season. The differences of water use patterns between the introduced and native plants are closely linked with the range of active root zones when competing for water. Our findings will facilitate the mechanistic understanding of plant-soil-water relations in alpine desert ecosystems and provide information for screening introduced species for sand fixation. Copyright © 2015 Elsevier B.V. All rights reserved.

The tropic response of plant roots to oxygen: oxytropism in Pisum sativum L

NASA Technical Reports Server (NTRS)

Porterfield, D. M.; Musgrave, M. E.

1998-01-01

Plant roots are known to orient growth through the soil by gravitropism, hydrotropism, and thigmotropism. Recent observations of plant roots that developed in a microgravity environment in space suggested that plant roots may also orient their growth toward oxygen (oxytropism). Using garden pea (Pisum sativum L. cv. Weibul's Apollo) and an agravitropic mutant (cv. Ageotropum), root oxytropism was studied in the controlled environment of a microrhizotron. A series of channels in the microrhizotron allowed establishment of an oxygen gradient of 0.8 mmol mol-1 mm-1. Curvature of seedling roots was determined prior to freezing the roots for subsequent spectrophotometric determinations of alcohol dehydrogenase activity. Oxytropic curvature was observed all along the gradient in both cultivars of pea. The normal gravitropic cultivar showed a maximal curvature of 45 degrees after 48 h, while the agravitropic mutant curved to 90 degrees. In each cultivar, the amount of curvature declined as the oxygen concentration decreased, and was linearly related to the root elongation rate. Since oxytropic curvature occurred in roots exposed to oxygen concentrations that were not low enough to induce the hypoxically responsive protein alcohol dehydrogenase, we suspect that the oxygen sensor associated with oxytropism does not control the induction of hypoxic metabolism. Our results indicate that oxygen can play a critical role in determining root orientation as well as impacting root metabolic status. Oxytropism allows roots to avoid oxygen-deprived soil strata and may also be the basis of an auto-avoidance mechanism, decreasing the competition between roots for water and nutrients as well as oxygen.

Natural and enhanced biodegradation of propylene glycol in airport soil.

PubMed

Toscano, Giuseppe; Colarieti, M Letizia; Anton, Attila; Greco, Guido; Biró, Borbála

2014-01-01

Aircraft de-icing fluids (ADF) are a source of water and soil pollution in airport sites. Propylene glycol (PG) is a main component in several commercial formulations of ADFs. Even though PG is biodegradable in soil, seasonal overloads may result in occasional groundwater contamination. Feasibility studies for the biostimulation of PG degradation in soil have been carried out in soil slurries, soil microcosms and enrichment cultures with and without the addition of nutrients (N and P sources, oligoelements), alternative electron acceptors (nitrate, oxygen releasing compounds) and adsorbents (activated carbon). Soil samples have been taken from the contaminated area of Gardermoen Airport Oslo. Under aerobic conditions and in the absence of added nutrients, no or scarce biomass growth is observed and PG degradation occurs by maintenance metabolism at constant removal rate by the original population of PG degraders. With the addition of nutrient, biomass exponential growth enhances aerobic PG degradation also at low temperatures (4 ° C) that occur at the high season of snowmelt. Anaerobic PG degradation without added nutrients still proceeds at constant rate (i.e. no biomass growth) and gives rise to reduced fermentation product (propionic acid, reduced Fe and Mn, methane). The addition of nitrate does not promote biomass growth but allows full PG mineralization without reduced by-products. Further exploitation on the field is necessary to fully evaluate the effect of oxygen releasing compounds and adsorbents.

Soil gas studies along the Trans-Challis fault system near Idaho City, Boise County, Idaho

USGS Publications Warehouse

McCarthy, J.H.; Kiilsgaard, T.H.

2001-01-01

Soil gases were sampled along several traverses that cross the Trans-Challis fault system in central Idaho. Anomalous carbon dioxide, hydrogen, oxygen, hydrocarbon, and sulfur gas concentrations coincide with faults and known mineralized areas. Anomalies in areas not known to be mineralized may reflect undiscovered mineral deposits or concealed faults. Soil gases may be a useful exploration guide for mineral deposits in this terrane.

Lead and Antimony Speciation in Shooting Range Soils: Molecular Scale Analysis, Temporal Trends and Mobility

DTIC Science & Technology

2017-11-20

35 Figure 25. Effects of saturation time on Pb concentrations as a function of soil type and column...36 Figure 26. Effects of saturation time on Sb concentrations as a function of soil type and column set (a...representation of the oxygen -terminated full layer termination surface of hematite ( ) (second octahedral layer and those beneath are not shown for clarity) ; (D

Oxygen profile and clogging in vertical flow sand filters for on-site wastewater treatment.

PubMed

Petitjean, A; Forquet, N; Boutin, C

2016-04-01

13 million people (about 20% of the population) use on-site wastewater treatment in France. Buried vertical sand filters are often built, especially when the soil permeability is not sufficient for septic tank effluent infiltration in undisturbed soil. Clogging is one of the main problems deteriorating the operation of vertical flow filters for wastewater treatment. The extent of clogging is not easily assessed, especially in buried vertical flow sand filters. We suggest examining two possible ways of detecting early clogging: (1) NH4-N/NO3-N outlet concentration ratio, and (2) oxygen measurement within the porous media. Two pilot-scale filters were equipped with probes for oxygen concentration measurements and samples were taken at different depths for pollutant characterization. Influent and effluent grab-samples were taken three times a week. The systems were operated using batch-feeding of septic tank effluent. Qualitative description of oxygen transfer processes under unclogged and clogged conditions is presented. NH4-N outlet concentration appears to be useless for early clogging detection. However, NO3-N outlet concentration and oxygen content allows us to diagnose the early clogging of the system. Copyright © 2016 Elsevier Ltd. All rights reserved.

Phosphorus distribution in soils amended with bioenergy co-product materials following corn growth

USDA-ARS?s Scientific Manuscript database

Biochar is a carbonaceous co-product that results from pyrolysis of organic material in the absence of oxygen produced for use as a soil amendment. Pyrolysis, gasification, and combustion are three processes being investigated and/or used to convert biomass into renewable energy and other products. ...

Impact of Distillery Spent Wash Irrigation on Agricultural Soil

NASA Astrophysics Data System (ADS)

Jadhav, Ramanand N.; Sarode, Dhananjay B.; Narkhede, Sachin D.; Khatik, Vasimshaikh A.; Attarde, Sanjay B.

2011-07-01

The disposal of wastes from industrial sources is becoming a serious problem throughout the world. In India, a total of approximately 40 million m3 of distillery spent wash is generated annually from 295 distilleries. The distillery spent wash is acidic and high levels of biological oxygen demand and chemical oxygen demand and contains nutrient elements such as potassium (K), nitrogen (N), and phosphorous (P). It is used as a source of plant nutrients and organic matter for various agricultural crops. It is usually applied to arable land near the distilleries as irrigation water or as a soil amendment. However, indiscriminate disposal of it has resulted in adverse impact on soil environments. This paper aims to identify the impact of distillery spent wash application for irrigation and on soil environment. The distillery spent wash can be a good source of nutrients necessary for plant growth. Application of various concentrations of spent wash on plant species was studied. A plot having 20-30% concentration of spent wash observed good growth. At higher doses, spent wash application is found harmful to crop growth and soil fertility and its use at lower doses remarkably improves germination and growth of crops.

Genomic insights into the Acidobacteria reveal strategies for their success in terrestrial environments

PubMed Central

Trojan, Daniela; Roux, Simon; Herbold, Craig; Rattei, Thomas; Woebken, Dagmar

2018-01-01

Summary Members of the phylum Acidobacteria are abundant and ubiquitous across soils. We performed a large‐scale comparative genome analysis spanning subdivisions 1, 3, 4, 6, 8 and 23 (n = 24) with the goal to identify features to help explain their prevalence in soils and understand their ecophysiology. Our analysis revealed that bacteriophage integration events along with transposable and mobile elements influenced the structure and plasticity of these genomes. Low‐ and high‐affinity respiratory oxygen reductases were detected in multiple genomes, suggesting the capacity for growing across different oxygen gradients. Among many genomes, the capacity to use a diverse collection of carbohydrates, as well as inorganic and organic nitrogen sources (such as via extracellular peptidases), was detected – both advantageous traits in environments with fluctuating nutrient environments. We also identified multiple soil acidobacteria with the potential to scavenge atmospheric concentrations of H2, now encompassing mesophilic soil strains within the subdivision 1 and 3, in addition to a previously identified thermophilic strain in subdivision 4. This large‐scale acidobacteria genome analysis reveal traits that provide genomic, physiological and metabolic versatility, presumably allowing flexibility and versatility in the challenging and fluctuating soil environment. PMID:29327410

Deep oxygenated ground water: Anomaly or common occurrence?

USGS Publications Warehouse

Winograd, I.J.; Robertson, F.N.

1982-01-01

Contrary to the prevailing notion that oxygen-depleting reactions in the soil zone and in the aquifer rapidly reduce the dissolved oxygen content of recharge water to detection limits, 2 to 8 milligrams per liter of dissolved oxygen is present in water from a variety of deep (100 to 1000 meters) aquifers in Nevada, Arizona, and the hot springs of the folded Appalachians and Arkansas. Most of the waters sampled are several thousand to more than 10,000 years old, and some are 80 kilometers from their point of recharge. Copyright ?? 1982 AAAS.

Relevance of ammonium oxidation within biological soil crust communities

USGS Publications Warehouse

Johnson, S.L.; Budinoff, C.R.; Belnap, J.; Garcia-Pichel, F.

2005-01-01

Thin, vertically structured topsoil communities that become ecologically important in arid regions (biological soil crusts or BSCs) are responsible for much of the nitrogen inputs into pristine arid lands. We studied N2 fixation and ammonium oxidation (AO) at subcentimetre resolution within BSCs from the Colorado Plateau. Pools of dissolved porewater nitrate/ nitrite, ammonium and organic nitrogen in wetted BSCs were high in comparison with those typical of aridosoils. They remained stable during incubations, indicating that input and output processes were of similar magnitude. Areal N2 fixation rates (6.5-48 ??mol C2H2 m-2 h -1) were high, the vertical distribution of N2 fixation peaking close to the surface if populations of heterocystous cyanobacteria were present, but in the subsurface if they were absent. Areal AO rates (19-46 ??mol N m-2 h-1) were commensurate with N2 fixation inputs. When considering oxygen availability, AO activity invariably peaked 2-3 mm deep and was limited by oxygen (not ammonium) supply. Most probable number (MPN)-enumerated ammonia-oxidizing bacteria (6.7-7.9 ?? 103 cells g-1 on average) clearly peaked at 2-3 mm depth. Thus, AO (hence nitrification) is a spatially restricted but important process in the nitrogen cycling of BSC, turning much of the biologically fixed nitrogen into oxidized forms, the fate of which remains to be determined.

Evaluation of diffuse and preferential flow pathways of infiltrated precipitation and irrigation using oxygen and hydrogen isotopes

NASA Astrophysics Data System (ADS)

Ma, Bin; Liang, Xing; Liu, Shaohua; Jin, Menggui; Nimmo, John R.; Li, Jing

2017-05-01

Subsurface-water flow pathways in three different land-use areas (non-irrigated grassland, poplar forest, and irrigated arable land) in the central North China Plain were investigated using oxygen (18O) and hydrogen (2H) isotopes in samples of precipitation, soils, and groundwater. Soil water in the top 10 cm was significantly affected by both evaporation and infiltration. Water at 10-40 cm depth in the grassland and arable land, and 10-60 cm in poplar forest, showed a relatively short residence time, as a substantial proportion of antecedent soil water was mixed with a 92-mm storm infiltration event, whereas below those depths (down to 150 cm), depleted δ18O spikes suggested that some storm water bypassed the shallow soil layers. Significant differences, in soil-water content and δ18O values, within a small area, suggested that the proportion of immobile soil water and water flowing in subsurface pathways varies depending on local vegetation cover, soil characteristics and irrigation applications. Soil-water δ18O values revealed that preferential flow and diffuse flow coexist. Preferential flow was active within the root zone, independent of antecedent soil-water content, in both poplar forest and arable land, whereas diffuse flow was observed in grassland. The depleted δ18O spikes at 20-50 cm depth in the arable land suggested the infiltration of irrigation water during the dry season. Temporal isotopic variations in precipitation were subdued in the shallow groundwater, suggesting more complete mixing of different input waters in the unsaturated zone before reaching the shallow groundwater.

Biodegradation of dissolved humic substances by fungi.

PubMed

Collado, Sergio; Oulego, Paula; Suárez-Iglesias, Octavio; Díaz, Mario

2018-04-01

Humic and fulvic acids constitute humic substances, a complex mixture of many different acids containing carboxyl and phenolate groups, which are not only the principal soil fertility factors but also the main pollutants present in landfill leachates or natural organic matter in water. Due to their low bacterial biodegradability, fungal biodegradation processes are key for their removal. The present study compiles and comments all the available literature on decomposition of aqueous humic substances by fungi or by their extracellular enzymes alone, focusing on the influence of the reaction conditions. The biodegradation extent mainly depends on the characteristics and concentration of the humic compounds, the type of microorganisms selected, the inoculation mode, the C and N sources, the presence of certain chemicals in the medium, the availability of oxygen, the temperature, and the pH.

Effects of simulated acid rain on soil fauna community composition and their ecological niches.

PubMed

Wei, Hui; Liu, Wen; Zhang, Jiaen; Qin, Zhong

2017-01-01

Acid rain is one of the severest environmental issues globally. Relative to other global changes (e.g., warming, elevated atmospheric [CO 2 ], and nitrogen deposition), however, acid rain has received less attention than its due. Soil fauna play important roles in multiple ecological processes, but how soil fauna community responds to acid rain remains less studied. This microcosm experiment was conducted using latosol with simulated acid rain (SAR) manipulations to observe potential changes in soil fauna community under acid rain stress. Four pH levels, i.e., pH 2.5, 3.5, 4.5, and 5.5, and a neutral control of pH 7.0 were set according to the current pH condition and acidification trend of precipitation in southern China. As expected, we observed that the SAR treatments induced changes in soil fauna community composition and their ecological niches in the tested soil; the treatment effects tended to increase as acidity increased. This could be attributable to the environmental stresses (such as acidity, porosity and oxygen supply) induced by the SAR treatments. In addition to direct acidity effect, we propose that potential changes in permeability and movability of water and oxygen in soils induced by acid rain could also give rise to the observed shifts in soil fauna community composition. These are most likely indirect pathways of acid rain to affect belowground community. Moreover, we found that nematodes, the dominating soil fauna group in this study, moved downwards to mitigate the stress of acid rain. This is probably detrimental to soil fauna in the long term, due to the relatively severer soil conditions in the deep than surface soil layer. Our results suggest that acid rain could change soil fauna community and the vertical distribution of soil fauna groups, consequently changing the underground ecosystem functions such as organic matter decomposition and greenhouse gas emissions. Copyright © 2016 Elsevier Ltd. All rights reserved.

The δ18O of Atmospheric Water Vapour is Recorded in the Oxygen Isotope Ratios of Leaf water and Organic Molecules at High Relative Humidity

NASA Astrophysics Data System (ADS)

Lehmann, M. M.; Goldsmith, G. R.; Schmid, L.; Siegwolf, R. T.; Gessler, A.; Saurer, M.

2016-12-01

The oxygen stable isotope ratios (δ18O) of water and organic molecules in plants hold information about plant physiology, ecohydrology, and environmental conditions. For instance, the δ18O ratio of leaf water reflects both the δ18O ratios of water in the soil and in the atmosphere. This water, which is incorporated into organic molecules at the time of synthesis, thus serves to record the environment in which the plant was growing. However, how δ18O of atmospheric water vapour affects the δ18O ratio of organic molecules remains poorly understood. In order to investigate the effects of fog and rain (e.g. high atmospheric water availability) on δ18O ratios of leaf water and organic molecules, we exposed oak tree saplings (Quercus robur) in wet and dry soil treatments to 18O-depleted water vapour at ca. 90% relative humidity for 5 h. We harvested plant material over 24 h to trace the movement of the isotopic label in water and organics throughout the plant from the leaves to the stem. The atmospheric water vapour caused a strong 18O-depletion in leaf and xylem water, as well as in leaf carbohydrates, with the most negative ratios observed at the end of the fogging. Moreover, the label was clearly observed in twig and stem phloem carbohydrates following a short delay. A detailed compound-specific isotope analysis of the leaf carbohydrates revealed that the label caused an 18O-depletion in fructose, glucose, and sucrose. Quercitol, an oak-specific alditol, did not show 18O-depletion. Clear soil moisture treatment effects were only observed for twig phloem carbohydrates, with a stronger 18O-depletion in wet plants than in dry plants, suggesting retarded leaf-to-phloem sugar export in trees under drought. We demonstrate that labelling with 18O-depleted water is a potential tool to trace the movement and incorporation of oxygen stable isotopes in plants. We clearly show that changes in δ18O of atmospheric water vapour are quickly imprinted on leaf water and ultimately incorporated into organic molecules.

Revegetation of Acid Rock Drainage (ARD) Producing Slope Surface Using Phosphate Microencapsulation and Artificial Soil

NASA Astrophysics Data System (ADS)

Kim, Jae Gon

2017-04-01

Oxidation of sulfides produces acid rock drainage (ARD) upon their exposure to oxidation environment by construction and mining activities. The ARD causes the acidification and metal contamination of soil, surface water and groundwater, the damage of plant, the deterioration of landscape and the reduction of slope stability. The revegetation of slope surface is one of commonly adopted strategies to reduce erosion and to increase slope stability. However, the revegetation of the ARD producing slope surface is frequently failed due to its high acidity and toxic metal content. We developed a revegetation method consisting of microencapsualtion and artificial soil in the laboratory. The revegetation method was applied on the ARD producing slope on which the revegetation using soil coverage and seeding was failed and monitored the plant growth for one year. The phosphate solution was applied on sulfide containing rock to form stable Fe-phosphate mineral on the surface of sulfide, which worked as a physical barrier to prevent contacting oxidants such as oxygen and Fe3+ ion to the sulfide surface. After the microencapsulation, two artificial soil layers were constructed. The first layer containing organic matter, dolomite powder and soil was constructed at 2 cm thickness to neutralize the rising acidic capillary water from the subsurface and to remove the dissolved oxygen from the percolating rain water. Finally, the second layer containing seeds, organic matter, nutrients and soil was constructed at 3 cm thickness on the top. After application of the method, the pH of the soil below the artificial soil layer increased and the ARD production from the rock fragments reduced. The plant growth showed an ordinary state while the plant died two month after germination for the previous revegetation trial. No soil erosion occurred from the slope during the one year field test.

Methane emission from natural wetlands: interplay between emergent macrophytes and soil microbial processes. A mini-review

PubMed Central

Laanbroek, Hendrikus J.

2010-01-01

Background According to the Intergovernmental Panel on Climate Change (IPCC) 2007, natural wetlands contribute 20–39 % to the global emission of methane. The range in the estimated percentage of the contribution of these systems to the total release of this greenhouse gas is large due to differences in the nature of the emitting vegetation including the soil microbiota that interfere with the production and consumption of methane. Scope Methane is a dominant end-product of anaerobic mineralization processes. When all electron acceptors except carbon dioxide are used by the microbial community, methanogenesis is the ultimate pathway to mineralize organic carbon compounds. Emergent wetland plants play an important role in the emission of methane to the atmosphere. They produce the carbon necessary for the production of methane, but also facilitate the release of methane by the possession of a system of interconnected internal gas lacunas. Aquatic macrophytes are commonly adapted to oxygen-limited conditions as they prevail in flooded or waterlogged soils. By this system, oxygen is transported to the underground parts of the plants. Part of the oxygen transported downwards is released in the root zone, where it sustains a number of beneficial oxidation processes. Through the pores from which oxygen escapes from the plant into the root zone, methane can enter the plant aerenchyma system and subsequently be emitted into the atmosphere. Part of the oxygen released into the root zone can be used to oxidize methane before it enters the atmosphere. However, the oxygen can also be used to regenerate alternative electron acceptors. The continuous supply of alternative electron acceptors will diminish the role of methanogenesis in the anaerobic mineralization processes in the root zone and therefore repress the production and emission of methane. The role of alternative element cycles in the inhibition of methanogenesis is discussed. Conclusions The role of the nitrogen cycle in repression of methane production is probably low. In contrast to wetlands particularly created for the purification of nitrogen-rich waste waters, concentrations of inorganic nitrogen compounds are low in the root zones in the growing season due to the nitrogen-consuming behaviour of the plant. Therefore, nitrate hardly competes with other electron acceptors for reduced organic compounds, and repression of methane oxidation by the presence of higher levels of ammonium will not be the case. The role of the iron cycle is likely to be important with respect to the repression of methane production and oxidation. Iron-reducing and iron-oxidizing bacteria are ubiquitous in the rhizosphere of wetland plants. The cycling of iron will be largely dependent on the size of the oxygen release in the root zone, which is likely to be different between different wetland plant species. The role of the sulfur cycle in repression of methane production is important in marine, sulfate-rich ecosystems, but might also play a role in freshwater systems where sufficient sulfate is available. Sulfate-reducing bacteria are omnipresent in freshwater ecosystems, but do not always react immediately to the supply of fresh sulfate. Hence, their role in the repression of methanogenesis is still to be proven in freshwater marshes. PMID:19689973

Minerals vs. Microbes: Biogeochemical Controls on Carbon Storage in Humid Tropical Forest Soils

NASA Astrophysics Data System (ADS)

Hall, S. J.; Silver, W. L.

2012-12-01

Humid tropical forest soils contain a substantial portion (~500 Pg) of the terrestrial carbon (C) pool, yet their response to climate change remains unclear due to mechanistic uncertainty in the biogeochemical controls on soil C storage in these ecosystems. Poorly-crystalline minerals have long been known to stabilize soil C, but few studies have explored their relative importance in comparison with other likely controls such as rhizosphere processes, oxygen deficiency (anaerobiosis), and C quality. We examined relationships among soil C and a suite of biogeochemical variables measured in 162 samples from surface soils (ultisols and oxisols) collected over scales of landforms to landscapes (m - km) in the Luquillo Experimental Forest, Puerto Rico. We measured iron (Fe), aluminum (Al), and manganese (Mn) oxides in 0.5M hydrochloric acid (HCl), sodium citrate/ascorbic acid (CA), and citrate/dithionite (CD) extractions, along with clay content, root biomass, C quality (C/N ratios), and anaerobiosis using HCl-extractable reduced iron (Fe(II)) concentrations as a proxy. We used mixed-effects models to compare the relative importance of the above variables (normalized by mean and standard deviation) as predictors of soil C, with random effects to account for spatial structure. Poorly-crystalline Al oxide concentrations (CA extraction), soil C/N ratio, and Fe(II) concentrations each had highly significant (p < 0.0001) positive relationships with soil C concentrations that conveyed equivalent explanatory power, assessed by comparing standardized regression coefficients. The optimal mixed model explained 82 % of the variation of the residual sum of squares of soil C concentrations, which varied between 2 - 20 % C among samples. Fine root biomass had a weak but significantly positive association with soil C concentrations (p < 0.05), while crystalline Fe oxide concentrations (CD extraction) displayed a negative correlation (p < 0.01), and clay contents had no significant relationship. The latter results are surprising given the documented role of Fe oxides and clay minerals in C stabilization, yet may indicate the importance of C supply via roots in controlling C concentrations in humid tropical ecosystems. Samples associated with high concentrations of crystalline Fe and high clay contents may represent soils from deeper in the soil profile exposed by landslides, characterized by poorly-developed aggregate structure and fewer C inputs since disturbance. Our optimal mixed model suggested an equivalent importance of soil mineralogy, anaerobiosis, and C quality as correlates of soil C concentrations across tropical forest ecosystems varying in temperature, precipitation, and community composition. Whereas soil mineralogy may be relatively static over timescales of years to decades, O2 availability and the chemical composition of soil C inputs and can potentially vary more rapidly. Our model suggests that changes in temperature and precipitation regimes that alter O2 availability and/or increase the lability of C inputs may lead to decreased soil C storage in humid tropical forest soils.

Soil greenhouse gas emissions and carbon budgeting in a short-hydroperiod floodplain wetland

USGS Publications Warehouse

Batson, Jackie; Noe, Gregory B.; Hupp, Cliff R.; Krauss, Ken W.; Rybicki, Nancy B.; Schenk, Edward R.

2015-01-01

Understanding the controls on floodplain carbon (C) cycling is important for assessing greenhouse gas emissions and the potential for C sequestration in river-floodplain ecosystems. We hypothesized that greater hydrologic connectivity would increase C inputs to floodplains that would not only stimulate soil C gas emissions but also sequester more C in soils. In an urban Piedmont river (151 km2 watershed) with a floodplain that is dry most of the year, we quantified soil CO2, CH4, and N2O net emissions along gradients of floodplain hydrologic connectivity, identified controls on soil aerobic and anaerobic respiration, and developed a floodplain soil C budget. Sites were chosen along a longitudinal river gradient and across lateral floodplain geomorphic units (levee, backswamp, and toe slope). CO2 emissions decreased downstream in backswamps and toe slopes and were high on the levees. CH4 and N2O fluxes were near zero; however, CH4emissions were highest in the backswamp. Annual CO2 emissions correlated negatively with soil water-filled pore space and positively with variables related to drier, coarser soil. Conversely, annual CH4 emissions had the opposite pattern of CO2. Spatial variation in aerobic and anaerobic respiration was thus controlled by oxygen availability but was not related to C inputs from sedimentation or vegetation. The annual mean soil CO2 emission rate was 1091 g C m−2 yr−1, the net sedimentation rate was 111 g C m−2 yr−1, and the vegetation production rate was 240 g C m−2 yr−1, with a soil C balance (loss) of −338 g C m−2 yr−1. This floodplain is losing C likely due to long-term drying from watershed urbanization.

Maximum Plant Uptakes for Water, Nutrients, and Oxygen Are Not Always Met by Irrigation Rate and Distribution in Water-based Cultivation Systems.

PubMed

Blok, Chris; Jackson, Brian E; Guo, Xianfeng; de Visser, Pieter H B; Marcelis, Leo F M

2017-01-01

Growing on rooting media other than soils in situ -i.e., substrate-based growing- allows for higher yields than soil-based growing as transport rates of water, nutrients, and oxygen in substrate surpass those in soil. Possibly water-based growing allows for even higher yields as transport rates of water and nutrients in water surpass those in substrate, even though the transport of oxygen may be more complex. Transport rates can only limit growth when they are below a rate corresponding to maximum plant uptake. Our first objective was to compare Chrysanthemum growth performance for three water-based growing systems with different irrigation. We compared; multi-point irrigation into a pond (DeepFlow); one-point irrigation resulting in a thin film of running water (NutrientFlow) and multi-point irrigation as droplets through air (Aeroponic). Second objective was to compare press pots as propagation medium with nutrient solution as propagation medium. The comparison included DeepFlow water-rooted cuttings with either the stem 1 cm into the nutrient solution or with the stem 1 cm above the nutrient solution. Measurements included fresh weight, dry weight, length, water supply, nutrient supply, and oxygen levels. To account for differences in radiation sum received, crop performance was evaluated with Radiation Use Efficiency (RUE) expressed as dry weight over sum of Photosynthetically Active Radiation. The reference, DeepFlow with substrate-based propagation, showed the highest RUE, even while the oxygen supply provided by irrigation was potentially growth limiting. DeepFlow with water-based propagation showed 15-17% lower RUEs than the reference. NutrientFlow showed 8% lower RUE than the reference, in combination with potentially limiting irrigation supply of nutrients and oxygen. Aeroponic showed RUE levels similar to the reference and Aeroponic had non-limiting irrigation supply of water, nutrients, and oxygen. Water-based propagation affected the subsequent cultivation in the DeepFlow negatively compared to substrate-based propagation. Water-based propagation resulted in frequent transient discolorations after transplanting in all cultivation systems, indicating a factor, other than irrigation supply of water, nutrients, and oxygen, influencing plant uptake. Plant uptake rates for water, nutrients, and oxygen are offered as a more fundamental way to compare and improve growing systems.

Maximum Plant Uptakes for Water, Nutrients, and Oxygen Are Not Always Met by Irrigation Rate and Distribution in Water-based Cultivation Systems

PubMed Central

Blok, Chris; Jackson, Brian E.; Guo, Xianfeng; de Visser, Pieter H. B.; Marcelis, Leo F. M.

2017-01-01

Growing on rooting media other than soils in situ -i.e., substrate-based growing- allows for higher yields than soil-based growing as transport rates of water, nutrients, and oxygen in substrate surpass those in soil. Possibly water-based growing allows for even higher yields as transport rates of water and nutrients in water surpass those in substrate, even though the transport of oxygen may be more complex. Transport rates can only limit growth when they are below a rate corresponding to maximum plant uptake. Our first objective was to compare Chrysanthemum growth performance for three water-based growing systems with different irrigation. We compared; multi-point irrigation into a pond (DeepFlow); one-point irrigation resulting in a thin film of running water (NutrientFlow) and multi-point irrigation as droplets through air (Aeroponic). Second objective was to compare press pots as propagation medium with nutrient solution as propagation medium. The comparison included DeepFlow water-rooted cuttings with either the stem 1 cm into the nutrient solution or with the stem 1 cm above the nutrient solution. Measurements included fresh weight, dry weight, length, water supply, nutrient supply, and oxygen levels. To account for differences in radiation sum received, crop performance was evaluated with Radiation Use Efficiency (RUE) expressed as dry weight over sum of Photosynthetically Active Radiation. The reference, DeepFlow with substrate-based propagation, showed the highest RUE, even while the oxygen supply provided by irrigation was potentially growth limiting. DeepFlow with water-based propagation showed 15–17% lower RUEs than the reference. NutrientFlow showed 8% lower RUE than the reference, in combination with potentially limiting irrigation supply of nutrients and oxygen. Aeroponic showed RUE levels similar to the reference and Aeroponic had non-limiting irrigation supply of water, nutrients, and oxygen. Water-based propagation affected the subsequent cultivation in the DeepFlow negatively compared to substrate-based propagation. Water-based propagation resulted in frequent transient discolorations after transplanting in all cultivation systems, indicating a factor, other than irrigation supply of water, nutrients, and oxygen, influencing plant uptake. Plant uptake rates for water, nutrients, and oxygen are offered as a more fundamental way to compare and improve growing systems. PMID:28443129

Using Nitrogen and Oxygen Isotope Compositions of Nitrate to Distinguish Contaminant Sources in Hanford Soil and Groundwater

DOE Office of Scientific and Technical Information (OSTI.GOV)

Conrad, Mark; Bill, Markus

2008-08-01

The nitrogen ({delta}{sup 15}N) and oxygen ({delta}{sup 18}O) isotopic compositions of nitrate in the environment are primarily a function of the source of the nitrate. The ranges of isotopic compositions for nitrate resulting from common sources are outlined in Figure 1 from Kendall (1998). As noted on Figure 1, processes such as microbial metabolism can modify the isotopic compositions of the nitrate, but the effects of these processes are generally predictable. At Hanford, nitrate and other nitrogenous compounds were significant components of most of the chemical processes used at the site. Most of the oxygen in nitrate chemicals (e.g., nitricmore » acid) is derived from atmospheric oxygen, giving it a significantly higher {delta}{sup 18}O value (+23.5{per_thousand}) than naturally occurring nitrate that obtains most of its oxygen from water (the {delta}{sup 18}O of Hanford groundwater ranges from -14{per_thousand} to -18{per_thousand}). This makes it possible to differentiate nitrate from Hanford site activities from background nitrate at the site (including most fertilizers that might have been used prior to the Department of Energy plutonium production activities at the site). In addition, the extreme thermal and chemical conditions that occurred during some of the waste processing procedures and subsequent waste storage in select single-shell tanks resulted in unique nitrate isotopic compositions that can be used to identify those waste streams in soil and groundwater at the site (Singleton et al., 2005; Christensen et al., 2007). This report presents nitrate isotope data for soil and groundwater samples from the Hanford 200 Areas and discusses the implications of that data for potential sources of groundwater contamination.« less

Grey water treatment by the slanted soil system with unsorted soil media.

PubMed

Ushijima, Ken; Tanaka, Erina; Suzuki, Laís Yuko; Hijikata, Nowaki; Funamizu, Naoyuki; Ito, Ryusei

2015-01-01

This study evaluated the performance of unsorted soil media in the slanted soil treatment system, in terms of removal efficiency in suspended solids (SS), chemical oxygen demand (COD), linear alkylbenzene sulphonate (LAS) and Escherichia coli, and lifetime until clogging occurs. Unsorted soil performed longer lifetime until clogging than sorted fine soil. Removal of SS, COD, and LAS also performed same or better level in unsorted soil than fine soil. As reaction coefficients of COD and LAS were described as a function of the hydraulic loading rate, we can design a slanted soil system according to the expected hydraulic loading rate and the targeted level of COD or LAS in effluent. Regarding bacteria removal, unsorted soil performed sufficient reduction of E. coli for 5 weeks; however, the removal process occurred throughout all four chambers, while that of fine soil occurred in one to two chambers.

Enzyme activity in terrestrial soil in relation to exploration of the Martian surface

NASA Technical Reports Server (NTRS)

Ardakani, M. S.; Mclaren, A. D.; Pukite, A. H.

1972-01-01

An exploration was made of enzyme activities in soil, including abundance, persistence and localization of these activities. An attempt was made to develop procedures for the detection and assaying of enzymes in soils suitable for presumptive tests for life in planetary soils. A suitable extraction procedure for soil enzymes was developed and measurements were made of activities in extracts in order to study how urease is complexed in soil organic matter. Mathematical models were developed, based on enzyme action and microbial growth in soil, for rates of oxidation of nitrogen as nitrogen compounds are moved downward in soil by water flow. These biogeochemical models should be applicable to any percolating system, with suitable modification for special features, such as oxygen concetrations, and types of hydrodynamic flow.

Soil organic matter mineralization of permafrost peat lands and sensitivity to temperature and lack of oxygen

NASA Astrophysics Data System (ADS)

Lamprecht, Richard E.; Diáková, Kateřina; Voigt, Carolina; Šantrůčková, Hana; Martikainen, Pertti; Biasi, Christina

2017-04-01

Globally, a significant pool of soil organic carbon (SOC) (Tarnocai et al. 2009) is stored in arctic peatlands where extensive permafrost prevents the decomposition of old soil organic matter (SOM). Vulnerability of ancient organic depositions in changing environment becomes a considerable issue in future climate models. Palsa mires, a typical cryogenic peatland type in subarctic tundra, are not only an important SOC pool but also have been reported as a source of nitrous oxide (N2O) (Marushchak et al. 2011). Microbial SOM mineralization and its sensitivity to changing environmental conditions are crucial to understand future C losses and greenhouse gas (GHG) fluxes in this abundant landform of subarctic region. The purpose of this experiment was to determine potential SOM mineralization in different layers of deep soil cores from an Arctic peatland. First, we aimed to define a response of C losses and GHG exchange rates to temperature and aerobic/anaerobic conditions in different peat layers down to the permafrost and beyond. Secondly, we sought for relations among SOM mineralization, nutrient availability and parameters of indigenous microbial community. Finally, we attempted to link the potential SOM mineralization of the different peat layers with surface GHG fluxes from a proceeding study conducted with the same, intact soil cores. Five deep peat soil cores were separated into five layers (0 20, 20 40, 40 60 cm, permafrost interface and permafrost layer). Homogenized peat was incubated in a factorial set-up of three temperatures (4, 10, and 16 °C) under aerobic and anaerobic conditions. At the beginning and the end of the total 5.5-months incubation period, we determined C and N availability, microbial biomass and potential activities of extracellular enzymes. Heterotrophic respiration (CO2), methane (CH4) and nitrous oxide (N2O) emissions were monitored weekly at the initial phase and biweekly later during the incubation. First results show that C-loss from aerobic decomposition dominated over C-loss from anaerobic decomposition with clear temperature sensitivities in different peat layers. Moreover, the peat layers showed definite patterns especially to N2O losses, less for CO2 losses. This study addresses the essential question to which extent deeper soil horizons of subarctic organic depositions contribute to the total soil GHG fluxes, and whether the nutrient availability, microbial community and environmental factors (i.e. temperature, O2 availability) constrain the SOM mineralization. REFERENCES Marushchak ME, Pitkämäki A, Koponen H, Biasi C, Seppälä M, Martikainen PJ (2011) Hot spots for nitrous oxide emissions found in different types of permafrost peatlands. Global Change Biol 17:2601-2614 Tarnocai C, Canadell JG, Schuur EAG, Kuhry P, Mazhitova G, Zimov S (2009) Soil organic carbon pools in the northern circumpolar permafrost region. Global Biogeochem Cycles 23

Ex situ bioremediation of a soil contaminated by mazut (heavy residual fuel oil)--a field experiment.

PubMed

Beškoski, Vladimir P; Gojgić-Cvijović, Gordana; Milić, Jelena; Ilić, Mila; Miletić, Srdjan; Solević, Tatjana; Vrvić, Miroslav M

2011-03-01

Mazut (heavy residual fuel oil)-polluted soil was exposed to bioremediation in an ex situ field-scale (600 m(3)) study. Re-inoculation was performed periodically with biomasses of microbial consortia isolated from the mazut-contaminated soil. Biostimulation was conducted by adding nutritional elements (N, P and K). The biopile (depth 0.4m) was comprised of mechanically mixed polluted soil with softwood sawdust and crude river sand. Aeration was improved by systematic mixing. The biopile was protected from direct external influences by a polyethylene cover. Part (10 m(3)) of the material prepared for bioremediation was set aside uninoculated, and maintained as an untreated control pile (CP). Biostimulation and re-inoculation with zymogenous microorganisms increased the number of hydrocarbon degraders after 50 d by more than 20 times in the treated soil. During the 5 months, the total petroleum hydrocarbon (TPH) content of the contaminated soil was reduced to 6% of the initial value, from 5.2 to 0.3 g kg(-1) dry matter, while TPH reduced to only 90% of the initial value in the CP. After 150 d there were 96%, 97% and 83% reductions for the aliphatic, aromatic, and nitrogen-sulphur-oxygen and asphaltene fractions, respectively. The isoprenoids, pristane and phytane, were more than 55% biodegraded, which indicated that they are not suitable biomarkers for following bioremediation. According to the available data, this is the first field-scale study of the bioremediation of mazut and mazut sediment-polluted soil, and the efficiency achieved was far above that described in the literature to date for heavy fuel oil. Copyright © 2011 Elsevier Ltd. All rights reserved.

Combination of biochar and poultry litter impact on soil properties and corn yield

USDA-ARS?s Scientific Manuscript database

Biochar, a by-product of a thermochemical process called pyrolysis, which involves burning of any agricultural and animal waste (biomass) under high temperature and absence of oxygen. It is assumed that since biochar is very high in aromatic carbon, which persists in soil environment for very long ...

Inactivation of E.coli 0157:H7 in crop soil by amending with fast and slow pryolysis-generated biochars

USDA-ARS?s Scientific Manuscript database

Biochar, generated by pyrolysis (i.e., heating biomass under low-oxygen conditions), results in incomplete combustion, producing a fine, grainy, highly porous material, 200 – 1,000 um in diameter. Benefits of biochar production include generation of bio-fuels, useful soil amendments for fertilizing...

A case study of the intrinsic bioremediation of petroleum hydrocarbons

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barker, G.W.; Raterman, K.T.; Fisher, J.B.

1995-12-31

Condensate liquids have been found to contaminate soil and groundwater at two gas production sites in the Denver Basin operated by Amoco Production Co. These sites have been closely monitored since July 1993 to determine whether intrinsic aerobic or anaerobic bioremediation of hydrocarbons occurs at a sufficient rate and to an adequate endpoint to support a no-intervention decision. Groundwater monitoring and analysis of soil cores suggest that intrinsic bioremediation is occurring at these sites by multiple pathways including aerobic oxidation, Fe{sup 3+} reduction, and sulfate reduction. In laboratory experiments the addition of gas condensate hydrocarbons to saturated soil from themore » gas production site stimulated sulfate reduction under anaerobic and oxygen-limiting conditions, and nitrate and Fe{sup 3+} reduction under oxygen-limiting conditions, compared to biotic controls that lacked hydrocarbon and sterile controls. The sulfate reduction corresponded to a reduction in the amount of toluene relative to other hydrocarbons. These results confirmed that subsurface soils at the gas production site have the potential for intrinsic bioremediation of hydrocarbons.« less

Minerals Masquerading As Enzymes: Abiotic Oxidation Of Soil Organic Matter In An Iron-Rich Humid Tropical Forest Soil

NASA Astrophysics Data System (ADS)

Hall, S. J.; Silver, W. L.

2010-12-01

Oxidative reactions play an important role in decomposing soil organic matter fractions that resist hydrolytic degradation, and fundamentally affect the cycling of recalcitrant soil carbon across ecosystems. Microbial extracellular oxidative enzymes (e.g. lignin peroxidases and laccases) have been assumed to provide a dominant role in catalyzing soil organic matter oxidation, while other potential oxidative mechanisms remain poorly explored. Here, we show that abiotic reactions mediated by the oxidation of ferrous iron (Fe(II)) could explain high potential oxidation rates in humid tropical forest soils, which often contain high concentrations of Fe(II) and experience rapid redox fluctuations between anaerobic and aerobic conditions. These abiotic reactions could provide an additional mechanism to explain high rates of decomposition in these ecosystems, despite frequent oxygen deficits. We sampled humid tropical forest soils in Puerto Rico, USA from various topographic positions, ranging from well-drained ridges to riparian valleys that experience broad fluctuations in redox potential. We measured oxidative activity by adding the model humic compound L-DOPA to soil slurries, followed by colorimetric measurements of the supernatant solution over time. Dilute hydrogen peroxide was added to a subset of slurries to measure peroxidative activity. We found that oxidative and peroxidative activity correlated positively with soil Fe(II) concentrations, counter to prevailing theory that low redox potential should suppress oxidative enzymes. Boiling or autoclaving sub-samples of soil slurries to denature any enzymes present typically increased peroxidative activity and did not eliminate oxidative activity, further suggesting the importance of an abiotic mechanism. We found substantial differences in the oxidation products of the L-DOPA substrate generated by our soil slurries in comparison with oxidation products generated by a purified enzyme (mushroom tyrosinase). Tyrosinase generated a red compound (dopachrome) that is the target analyte of the traditional L-DOPA oxidative enzyme assay, whereas our soil slurries generated purple melanin-like compounds that were likely generated by more extensive oxidation. To investigate the importance of Fe(II) for L-DOPA oxidation, we added realistic concentrations of Fe(II) (equivalent to 10 - 500 μg Fe g-1 soil) to an L-DOPA buffer solution under oxic conditions, and found rates of L-DOPA oxidation comparable to those from soil slurries. Molecular oxygen and Fe(II) are known to generate strong oxidants via Fenton reactions. We decreased L-DOPA oxidation rates in soil slurries by adding catalase and superoxide-dismutase enzymes to scavenge reactive oxygen species, suggesting that a free-radical mechanism contributed to L-DOPA oxidation. We obtained similar results using another humic model compound, tetramethylbenzidine (TMB). Although abiotic oxidative reactions involving iron have been employed to degrade anthropogenic organic contaminants, this study is among the first to demonstrate their potential importance for oxidizing organic matter in natural ecosystems. In soils rich in Fe(II), abiotic reactions could complement, or even obviate, the role of microbial oxidative enzymes in degrading recalcitrant organic compounds.

Imaging pH and oxygen at the soil-root interface by planar optodes: a challenging technology to study dynamic rhizosphere processes.

NASA Astrophysics Data System (ADS)

Daudin, Gabrielle; Oburger, Eva; Schmidt, Hannes; Borisov, Sergey; Pradier, Céline; Jourdan, Christophe; Marsden, Claire; Obermaier, Daniela; Woebken, Dagmar; Richter, Andreas; Wenzel, Walter; Hinsinger, Philippe

2017-04-01

Roots do not only take up water and nutrients from surrounding soil but they also release a wide range of exudates, such as low molecular weight organic compounds, CO2 or protons. Root-soil interactions trigger heterogeneous rhizosphere processes based on differences in root activity along the root axis and with distance from the root surface. Elucidating their temporal and spatial dynamics is of crucial importance for a better understanding of these interrelated biogeochemical processes in the rhizosphere. Therefore, monitoring key parameters at a fine scale and in a non-invasive way at the root-soil interface is essential. Planar optodes are an emerging technology that allows in situ and non-destructive imaging of mainly pH, CO2 and O2. Originated in limnology, planar optodes have recently been applied to soil-root systems in laboratory conditions. This presentation will highlight advantages and challenges of using planar optodes to image pH and O2 dynamics in the rhizosphere, focusing on two RGB (red-green-blue) approaches: a commercially available system (PreSens) and a custom-made one. Important insights into robustness, accuracy, potentials and limitations of the two systems applied to different laboratory/greenhouse-based experimental conditions (flooded and aerobic rhizobox systems, plant species) will be addressed. Furthermore, challenges of optode measurements in the field, including a first case study with Eucalyptus grandis in Brazil, will be discussed.

Bacterial community changes during bioremediation of aliphatic hydrocarbon-contaminated soil.

PubMed

Militon, Cécile; Boucher, Delphine; Vachelard, Cédric; Perchet, Geoffrey; Barra, Vincent; Troquet, Julien; Peyretaillade, Eric; Peyret, Pierre

2010-12-01

The microbial community response during the oxygen biostimulation process of aged oil-polluted soils is poorly documented and there is no reference for the long-term monitoring of the unsaturated zone. To assess the potential effect of air supply on hydrocarbon fate and microbial community structure, two treatments (0 and 0.056 mol h⁻¹ molar flow rate of oxygen) were performed in fixed bed reactors containing oil-polluted soil. Microbial activity was monitored continuously over 2 years throughout the oxygen biostimulation process. Microbial community structure before and after treatment for 12 and 24 months was determined using a dual rRNA/rRNA gene approach, allowing us to characterize bacteria that were presumably metabolically active and therefore responsible for the functionality of the community in this polluted soil. Clone library analysis revealed that the microbial community contained many rare phylotypes. These have never been observed in other studied ecosystems. The bacterial community shifted from Gammaproteobacteria to Actinobacteria during the treatment. Without aeration, the samples were dominated by a phylotype linked to the Streptomyces. Members belonging to eight dominant phylotypes were well adapted to the aeration process. Aeration stimulated an Actinobacteria phylotype that might be involved in restoring the ecosystem studied. Phylogenetic analyses suggested that this phylotype is a novel, deep-branching member of the Actinobacteria related to the well-studied genus Acidimicrobium. FEMS Microbiology Ecology © 2010 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. No claim to original French government works.

A laboratory study of the biodegradation of an alcohol ethoxylate surfactant by native soil microbes

NASA Astrophysics Data System (ADS)

Ang, Carolina C.; Abdul, Abdul S.

1992-09-01

Laboratory experiments were conducted to study the biodegradation of a nonionic alcohol ethoxylate surfactant by native microbes from a contaminated site. Three sets of experiments consisting of 13 microcosms were carried out to evaluate the rate of biodegradation and the effect of nutrients and supplementary oxygen on the degradation process. The results from these active microcosms were compared with those for controlled microcosms in which a biocide was added to inhibit biological activities. In the presence of ground water and sterilized soil, surfactant solutions with initial concentrations of 1000, 650, 250, and 180 mgl -1 were reduced to less than 5 mgl -1 in 36 days, 20 days, 17 days, and 17 days, respectively. The biodegradation rate in microcosms with added nutrients was more than twice the rate in the reactor without nutrients. The results from experiments in which various nitrogen and phosphorus nutrients were added showed that a ratio of 10 carbon:2 nitrogen:1 phosphorus was the optimum for the biodegradation of surfactant under the microcosm conditions. The addition of 5 mgl -1 of oxygen in the form of hydrogen peroxide increased the degradation rate of surfactant by 30%. The study showed that microbes indigenous to the soil and ground water at a contaminated site rapidly degrade the low levels of the surfactant that may remain at the site after soil washing, and that the degradation rate can be increased by the addition of nutrients and oxygen.

Three-Dimensional Mapping of Soil Chemical Characteristics at Micrometric Scale by Combining 2D SEM-EDX Data and 3D X-Ray CT Images.

PubMed

Hapca, Simona; Baveye, Philippe C; Wilson, Clare; Lark, Richard Murray; Otten, Wilfred

2015-01-01

There is currently a significant need to improve our understanding of the factors that control a number of critical soil processes by integrating physical, chemical and biological measurements on soils at microscopic scales to help produce 3D maps of the related properties. Because of technological limitations, most chemical and biological measurements can be carried out only on exposed soil surfaces or 2-dimensional cuts through soil samples. Methods need to be developed to produce 3D maps of soil properties based on spatial sequences of 2D maps. In this general context, the objective of the research described here was to develop a method to generate 3D maps of soil chemical properties at the microscale by combining 2D SEM-EDX data with 3D X-ray computed tomography images. A statistical approach using the regression tree method and ordinary kriging applied to the residuals was developed and applied to predict the 3D spatial distribution of carbon, silicon, iron, and oxygen at the microscale. The spatial correlation between the X-ray grayscale intensities and the chemical maps made it possible to use a regression-tree model as an initial step to predict the 3D chemical composition. For chemical elements, e.g., iron, that are sparsely distributed in a soil sample, the regression-tree model provides a good prediction, explaining as much as 90% of the variability in some of the data. However, for chemical elements that are more homogenously distributed, such as carbon, silicon, or oxygen, the additional kriging of the regression tree residuals improved significantly the prediction with an increase in the R2 value from 0.221 to 0.324 for carbon, 0.312 to 0.423 for silicon, and 0.218 to 0.374 for oxygen, respectively. The present research develops for the first time an integrated experimental and theoretical framework, which combines geostatistical methods with imaging techniques to unveil the 3-D chemical structure of soil at very fine scales. The methodology presented in this study can be easily adapted and applied to other types of data such as bacterial or fungal population densities for the 3D characterization of microbial distribution.

Three-Dimensional Mapping of Soil Chemical Characteristics at Micrometric Scale by Combining 2D SEM-EDX Data and 3D X-Ray CT Images

PubMed Central

Hapca, Simona; Baveye, Philippe C.; Wilson, Clare; Lark, Richard Murray; Otten, Wilfred

2015-01-01

There is currently a significant need to improve our understanding of the factors that control a number of critical soil processes by integrating physical, chemical and biological measurements on soils at microscopic scales to help produce 3D maps of the related properties. Because of technological limitations, most chemical and biological measurements can be carried out only on exposed soil surfaces or 2-dimensional cuts through soil samples. Methods need to be developed to produce 3D maps of soil properties based on spatial sequences of 2D maps. In this general context, the objective of the research described here was to develop a method to generate 3D maps of soil chemical properties at the microscale by combining 2D SEM-EDX data with 3D X-ray computed tomography images. A statistical approach using the regression tree method and ordinary kriging applied to the residuals was developed and applied to predict the 3D spatial distribution of carbon, silicon, iron, and oxygen at the microscale. The spatial correlation between the X-ray grayscale intensities and the chemical maps made it possible to use a regression-tree model as an initial step to predict the 3D chemical composition. For chemical elements, e.g., iron, that are sparsely distributed in a soil sample, the regression-tree model provides a good prediction, explaining as much as 90% of the variability in some of the data. However, for chemical elements that are more homogenously distributed, such as carbon, silicon, or oxygen, the additional kriging of the regression tree residuals improved significantly the prediction with an increase in the R2 value from 0.221 to 0.324 for carbon, 0.312 to 0.423 for silicon, and 0.218 to 0.374 for oxygen, respectively. The present research develops for the first time an integrated experimental and theoretical framework, which combines geostatistical methods with imaging techniques to unveil the 3-D chemical structure of soil at very fine scales. The methodology presented in this study can be easily adapted and applied to other types of data such as bacterial or fungal population densities for the 3D characterization of microbial distribution. PMID:26372473

Analysis Results for Lunar Soil Simulant Using a Portable X-Ray Fluorescence Analyzer

NASA Technical Reports Server (NTRS)

Boothe, R. E.

2006-01-01

Lunar soil will potentially be used for oxygen generation, water generation, and as filler for building blocks during habitation missions on the Moon. NASA s in situ fabrication and repair program is evaluating portable technologies that can assess the chemistry of lunar soil and lunar soil simulants. This Technical Memorandum summarizes the results of the JSC 1 lunar soil simulant analysis using the TRACeR III IV handheld x-ray fluorescence analyzer, manufactured by KeyMaster Technologies, Inc. The focus of the evaluation was to determine how well the current instrument configuration would detect and quantify the components of JSC-1.

Occurrence of nitro- and oxy-PAHs in agricultural soils in eastern China and excess lifetime cancer risks from human exposure through soil ingestion.

PubMed

Sun, Zhe; Zhu, Ying; Zhuo, Shaojie; Liu, Weiping; Zeng, Eddy Y; Wang, Xilong; Xing, Baoshan; Tao, Shu

2017-11-01

The quality of agricultural soil is vital to human health, however soil contamination is a severe problem in China. Polycyclic aromatic hydrocarbons (PAHs) have been found to be among the major soil contaminants in China. PAH derivatives could be more toxic but their measurements in soils are extremely limited. This study reports levels, spatial distributions and compositions of 11 nitrated (nPAHs) and 4 oxygenated PAHs (oPAHs) in agricultural soils covering 26 provinces in eastern China to fill the data gap. The excess lifetime cancer risk (ELCR) from the exposure to them in addition to 21 parent PAHs (pPAHs) via soil ingestion has been estimated. The mean concentration of ∑nPAHs and ∑oPAHs in agricultural soils is 50±45μg/kg and 9±8μg/kg respectively. Both ∑nPAHs and ∑oPAHs follow a similar spatial distribution pattern with elevated concentrations found in Liaoning, Shanxi, Henan and Guizhou. However if taking account of pPAHs, the high ELCR by soil ingestion is estimated for Shanxi, Zhejiang, Liaoning, Jiangsu and Hubei. The maximum ELCR is estimated at ca.10 -5 by both deterministic and probabilistic studies with moderate toxic equivalent factors (TEFs). If maximum TEFs available are applied, there is a 0.2% probability that the ELCR will exceed 10 -4 in the areas covered. There is a great chance to underestimate the ELCR via soil ingestion for some regions if only the 16 priority PAHs in agricultural soils are considered. The early life exposure and burden are considered extremely important to ELCR. Emission sources are qualitatively predicted and for areas with higher ELCR such as Shanxi and Liaoning, new loadings of PAHs and derivatives are identified. This is the first large scale study on nPAHs and oPAHs contamination levels in agricultural soils in China. The risk assessment based on this underpins the policy making and is valuable for both scientists and policy makers. Copyright © 2017 Elsevier Ltd. All rights reserved.

Organomineral interactions as an important mechanism for stabilisation of bacterial residues in soil

NASA Astrophysics Data System (ADS)

Miltner, Anja; Achtenhagen, Jan; Kästner, Matthias

2017-04-01

Although plant material is the original input of organic matter to soils, microbial residues have been identified to contribute to a large extent to soil organic matter. However, until now it is unclear how microbial residues are stabilised in soil and protected from degradation. We hypothesised that organomineral interactions, in particular encrustation by oxides, may play an important role, which might vary depending on environmental conditions, e.g. redox potential. Therefore we produced 14C-labelled Escherichia coli cells and cell envelope fragments and coprecipitated these materials with Fe oxide or Al oxide. Mineral-free (control) and mineral-encrusted bacterial residues were incubated for 345 days at 20˚ C under either oxic or oxygen-limited conditions, and mineralisation was quantified by scintillation counting of the CO2 produced during incubation. Oxygen limitation was achieved by first exchanging the atmosphere in the incubation vessels with dinitrogen gas. After 100 days of incubation, the anoxic treatments were waterlogged to further decrease the redox potential, and after 290 days, glucose and nutrients were supplied to all treatments in order to foster microbial activity and consumption of electron acceptors. The mineralisation curves were fitted by double-exponential (0-100 days), first-order kinetic (100-290 days) and linear (290-345 days) models. The model parameters were tested for significant differences between the treatments by three-way ANOVA with post-hoc Bonferroni t-test. We found that encrustation by the oxides significantly reduced mineralisation of the bacterial residues. This effect was inversed by reductive dissolution of Fe oxides after substrate and nutrient addition to the oxygen-limited treatments, suggesting a significant role of the encrustation in stabilisation of the bacterial residues. We also observed that bacterial cell envelope fragments were generally slightly more resistant to mineralisation than whole cells. The results indicate that bacterial residues, in particular cell envelope fragments, may be stabilised in soil by organomineral interactions as long as the minerals are stable in soil.

Role of plant-mediated gas transport in CH4 emissions from Phragmites-dominated peatlands

NASA Astrophysics Data System (ADS)

van den Berg, Merit; Ingwersen, Joachim; van den Elzen, Eva; Lamers, Leon P. M.; Streck, Thilo

2016-04-01

A large part of the methane (CH4) produced in peatlands is directly oxidized and the extent of its oxidation depends on the gas transport pathway. In wetland ecosystems, CH4 can be transported from the soil to the atmosphere via diffusion, ebullition and via aerenchyma of roots and stems of vascular plants. Compared to other wetland plants, the very common species Phragmites australis (Common reed) appears to have a high ability to transport gases between the soil and atmosphere. The gas exchange within Phragmites plants takes place via convective flow through the culm, which is believed to be achieved by a humidity-induced pressure gradient and is more than 5-times as efficient as diffusion. By this mechanism, CH4 surpasses the upper (oxic) soil layers and therefore oxidation of CH4 may well be reduced. On the other hand, transport of oxygen in Phragmites plants tends to enhance O2concentration in the rhizosphere, which will foster CH4oxidation in deeper soil layers. It is therefore unknown whether humidity-induced convection leads to higher or lower overall CH4 emission in Phragmites, which is essential to understand their role in the emissions from these very common peatland types. To investigate whether this internal gas transport mechanism of reed promotes or reduces CH4 fluxes to the atmosphere, we conducted manipulative field experiments in a large Phragmites peatland in South-West Germany in October 2014 and July 2015. Using large chambers, we compared CH4 fluxes from intact plots, plots with cut reed, and plots with cut + sealed reed to exclude gas transport through the plants. Additionally, pore water samples from the plots were analyzed for possible changes in soil chemistry due to the change of oxygen transport into the soil by the treatments. Based on our results, we will explain the potential role of rhizosphere oxygenation and convective flow on CH4 emissions from Phragmites-dominated peatlands in relation to other environmental condition.

Conceptual design of a lunar oxygen pilot plant Lunar Base Systems Study (LBSS) task 4.2

NASA Technical Reports Server (NTRS)

1988-01-01

The primary objective was to develop conceptual designs of two pilot plants to produce oxygen from lunar materials. A lunar pilot plant will be used to generate engineering data necessary to support an optimum design of a larger scale production plant. Lunar oxygen would be of primary value as spacecraft propellant oxidizer. In addition, lunar oxygen would be useful for servicing nonregenerative fuel cell power systems, providing requirements for life support, and to make up oxygen losses from leakage and airlock cycling. Thirteen different lunar oxygen production methods are described. Hydrogen reduction of ilmenite and extraction of solar-wind hydrogen from bulk lunar soil were selected for conceptual design studies. Trades and sensitivity analyses were performed with these models.

Comparative study on nutrient removal of agricultural non-point source pollution for three filter media filling schemes in eco-soil reactors.

PubMed

Du, Fuyi; Xie, Qingjie; Fang, Longxiang; Su, Hang

2016-08-01

Nutrients (nitrogen and phosphorus) from agricultural non-point source (NPS) pollution have been increasingly recognized as a major contributor to the deterioration of water quality in recent years. The purpose of this article is to investigate the discrepancies in interception of nutrients in agricultural NPS pollution for eco-soil reactors using different filling schemes. Parallel eco-soil reactors of laboratory scale were created and filled with filter media, such as grit, zeolite, limestone, and gravel. Three filling schemes were adopted: increasing-sized filling (I-filling), decreasing-sized filling (D-filling), and blend-sized filling (B-filling). The systems were intermittent operations via simulated rainstorm runoff. The nutrient removal efficiency, biomass accumulation and vertical dissolved oxygen (DO) distribution were defined to assess the performance of eco-soil. The results showed that B-filling reactor presented an ideal DO for partial nitrification-denitrification across the eco-soil, and B-filling was the most stable in the change of bio-film accumulation trends with depth in the three fillings. Simultaneous and highest removals of NH4(+)-N (57.74-70.52%), total nitrogen (43.69-54.50%), and total phosphorus (42.50-55.00%) were obtained in the B-filling, demonstrating the efficiency of the blend filling schemes of eco-soil for oxygen transfer and biomass accumulation to cope with agricultural NPS pollution.

Occurrence and temporal variability of methyl tert-butyl ether (MTBE) and other volatile organic compounds in select sources of drinking water : results of the focused survey

USGS Publications Warehouse

Delzer, Gregory C.; Ivahnenko, Tamara

2003-01-01

The large-scale use of the gasoline oxygenate methyl tert-butyl ether (MTBE), and its high solubility, low soil adsorption, and low biodegradability, has resulted in its detection in ground water and surface water in many places throughout the United States. Studies by numerous researchers, as well as many State and local environmental agencies, have discovered high levels of MTBE in soils and ground water at leaking underground gasoline-storage-tank sites and frequent occurrence of low to intermediate levels of MTBE in reservoirs used for both public water supply and recreational boating.In response to these findings, the American Water Works Association Research Foundation sponsored an investigation of MTBE and other volatile organic compounds (VOCs) in the Nation?s sources of drinking water. The goal of the investigation was to provide additional information on the frequency of occurrence, concentration, and temporal variability of MTBE and other VOCs in source water used by community water systems (CWSs). The investigation was completed in two stages: (1) reviews of available literature and (2) the collection of new data. Two surveys were associated with the collection of new data. The first, termed the Random Survey, employed a statistically stratified design for sampling source water from 954 randomly selected CWSs. The second, which is the focus of this report, is termed the Focused Survey, which included samples collected from 134 CWS source waters, including ground water, reservoirs, lakes, rivers, and streams, that were suspected or known to contain MTBE. The general intent of the Focused Survey was to compare results with the Random Survey and provide an improved understanding of the occurrence, concentration, temporal variability, and anthropogenic factors associated with frequently detected VOCs. Each sample collected was analyzed for 66 VOCs, including MTBE and three other ether gasoline oxygenates (hereafter termed gasoline oxygenates). As part of the Focused Survey, 451 source-water samples and 744 field quality-control (QC) samples were collected from 78 ground-water, 39 reservoir and (or) lake, and 17 river and (or) stream source waters at fixed intervals for a period of 1 year.Using a common assessment level of 0.2 ?g/L (micrograms per liter) (2.0 ?g/L for methyl ethyl ketone), 37 of the 66 VOCs analyzed were detected in both surveys. However, VOCs, especially MTBE and other gasoline oxygenates, were detected more frequently in the Focused Survey than in the Random Survey. MTBE was detected in 55.5 percent of the CWSs sampled in the Focused Survey and in 8.7 percent of those sampled in the Random Survey. Little difference in occurrence, however, was observed for trihalomethanes (THMs), which were detected in 16.4 and 14.8 percent of Focused Survey and The large-scale use of the gasoline oxygenate methyl tert-butyl ether (MTBE), and its high solubility, low soil adsorption, and low biodegradability, has resulted in its detection in ground water and surface water in many places throughout the United States. Studies by numerous researchers, as well as many State and local environmental agencies, have discovered high levels of MTBE in soils and ground water at leaking underground gasoline-storage-tank sites and frequent occurrence of low to intermediate levels of MTBE in reservoirs used for both public water supply and recreational boating.In response to these findings, the American Water Works Association Research Foundation sponsored an investigation of MTBE and other volatile organic compounds (VOCs) in the Nation?s sources of drinking water. The goal of the investigation was to provide additional information on the frequency of occurrence, concentration, and temporal variability of MTBE and other VOCs in source water used by community water systems (CWSs). The investigation was completed in two stages: (1) reviews of available literature and (2) the collection of new data. Two surveys wer

Limitations of the isotopic composition of nitrates as a tracer of their origin

NASA Astrophysics Data System (ADS)

Kloppmann, Wolfram; Mayer, Bernhard; Otero, Neus; Sebilo, Mathieu; Gooddy, Daren; Lapworth, Dan; Surridge, Ben; Petelet Giraud, Emmanuelle; Flehoc, Christine; Baran, Nicole

2017-04-01

Nitrogen and oxygen isotopes are traditionally considered and frequently used as tracers of nitrate sources in watersheds used for drinking water production. The enrichment of synthetic nitrate-containing fertilizers in 18O due to the contribution of atmospheric oxygen in the production process confers a specific isotopic fingerprint to mineral fertilizers. In spite of the still widespread use on nitrate-containing synthetic fertilizers, their characteristic N and O isotope signatures are rarely unambiguously observed in nitrate-contaminated groundwater. We postulate, in line with Mengis et al. (2001), that fertilizer-derived nitrate is not directly and rapidly transferred to groundwater but rather retained in the soil-plant system as organic N and then mineralized and re-oxidized (termed the mineralization-immobilization turnover, MIT) thereby re-setting the oxygen isotope composition of nitrate and also changing its N isotope ratios. We show examples from watersheds on diverse alluvial/clastic and carbonate aquifers in eastern and northern France where, in spite of the use of mineral fertilizers, evidenced also through other isotopic tracers (boron isotopes), both N and O-isotope ratios are very homogeneous and compatible with nitrification of ammonium where 2/3 of oxygen is derived from soil water and 1/3 from atmospheric O2. These field data are corroborated by lysimeter data from Canada. Even if in areas where ammonium is derived from chemical fertilizers, N values still tend to be lower than in areas where ammonium is derived from manure/sewage, this is clearly a limitation to the dual isotope method (N, O) for nitrate source identification, but has important implications for the nitrogen mobility and residence time in soils amended with synthetic fertilizers (Sebilo et al., 2013). Mengis M., Walther U., Bernasconi S. M., Wehrli B. (2001) Limitations of Using δ18O for the Source Identification of Nitrate in Agricultural Soils. Environmental Science & Technology, 35, 1840-1844. Sebilo M., Mayer B., Nicolardot B., Pinay G., Mariotti A. (2013) Long-term fate of nitrate fertilizer in agricultural soils. Proceedings of the National Academy of Sciences of the United States of America, 110, 18185-18189.

Vapor phase pyrolysis

NASA Technical Reports Server (NTRS)

Steurer, Wolfgang

1992-01-01

The vapor phase pyrolysis process is designed exclusively for the lunar production of oxygen. In this concept, granulated raw material (soil) that consists almost entirely of metal oxides is vaporized and the vapor is raised to a temperature where it dissociates into suboxides and free oxygen. Rapid cooling of the dissociated vapor to a discrete temperature causes condensation of the suboxides, while the oxygen remains essentially intact and can be collected downstream. The gas flow path and flow rate are maintained at an optimum level by control of the pressure differential between the vaporization region and the oxygen collection system with the aid of the environmental vacuum.

Evaluation of diffuse and preferential flow pathways of infiltratedprecipitation and irrigation using oxygen and hydrogen isotopes

USGS Publications Warehouse

Ma, Bin; Liang, Xing; Liu, Shaohua; Jin, Menggui; Nimmo, John R.; Li, Jingxin

2017-01-01

Subsurface-water flow pathways in three different land-use areas (non-irrigated grassland, poplar forest, and irrigated arable land) in the central North China Plain were investigated using oxygen (18O) and hydrogen (2H) isotopes in samples of precipitation, soils, and groundwater. Soil water in the top 10 cm was significantly affected by both evaporation and infiltration. Water at 10–40 cm depth in the grassland and arable land, and 10–60 cm in poplar forest, showed a relatively short residence time, as a substantial proportion of antecedent soil water was mixed with a 92-mm storm infiltration event, whereas below those depths (down to 150 cm), depleted δ18O spikes suggested that some storm water bypassed the shallow soil layers. Significant differences, in soil-water content and δ18O values, within a small area, suggested that the proportion of immobile soil water and water flowing in subsurface pathways varies depending on local vegetation cover, soil characteristics and irrigation applications. Soil-water δ18O values revealed that preferential flow and diffuse flow coexist. Preferential flow was active within the root zone, independent of antecedent soil-water content, in both poplar forest and arable land, whereas diffuse flow was observed in grassland. The depleted δ18O spikes at 20–50 cm depth in the arable land suggested the infiltration of irrigation water during the dry season. Temporal isotopic variations in precipitation were subdued in the shallow groundwater, suggesting more complete mixing of different input waters in the unsaturated zone before reaching the shallow groundwater.

Electrolytic production of oxygen from lunar resources

NASA Technical Reports Server (NTRS)

Keller, Rudolf

1991-01-01

Some of the most promising approaches to extract oxygen from lunar resources involve electrochemical oxygen generation. In a concept called magma electrolysis, suitable oxides (silicates) which are molten at 1300 to 1500 C are then electrolyzed. Residual melt can be discarded after partial electrolysis. Alternatively, lunar soil may be dissolved in a molten salt and electrolyzed. In this approach, temperatures are lower and melt conductances higher, but electrolyte constituents need to be preserved. In a different approach ilmenite is reduced by hydrogen and the resulting water is electrolyzed.

Column Experiments Investigating Wetting and Drying of Soil and Consumption of Organic Contaminants for Managed Aquifer Recharge

NASA Astrophysics Data System (ADS)

Silver, M.; Schueth, C.; Wefer-Roehl, A.; Kuebeck, C.

2014-12-01

The EU FP7 project MARSOL seeks to address water scarcity challenges in arid regions. Within this framework, we conduct a series of experiments to evaluate the potential for water quality improvement and changes in hydraulic conductivity when managed aquifer recharge (MAR) is performed by infiltrating treated wastewater in soils that do not have high potential for sorption. For example, in the Attica (Athens and vicinity) region of Greece, the bedrock is mostly marble, resulting in calcite-rich soils that present little potential for sorption of contaminants to mineral surfaces. This leaves consumption of organic contaminants by microbes as the critical mechanism for water quality improvement, when treated wastewater is infiltrated through such soils. In order to enhance the potential for contaminant consumption by aerobic bacteria in a way that would be realistic to later perform in an infiltration basin, we conduct experiments using a series of wetting and drying cycles. The experimental setup consists of 90-cm long soil columns, fitted with oxygen sensors, time-domain reflectometry sensors (to measure moisture content), sampling ports, oxidation-reduction probes, and head observation tubes. We use the data collected from these sensors and features of the experimental setup to answer the following questions: 1. Does hydraulic conductivity change, from formation of a biofilm or dissolution of calcite (or both)? 2. Are organic contaminants consumed? 3. What effect do wetting and drying cycles have on consumption of organic contaminants? 4. How long can infiltration of treated wastewater last, before oxygen is consumed and conditions become reducing? These questions are investigated by observing the hydraulic head and outflow, performing tracer tests, taking samples from the sampling ports and outflow for chemical analyses, and measuring moisture content and oxygen concentration, in the course of performing multiple wetting and drying cycles. These column experiments will be used to evaluate the potential for new MAR applications in areas facing water scarcity challenges. In the future the experiments will be expanded to test multiple soils and optimize both the soil type and infiltration patterns in order to best obtain water quality improvements through MAR.

The role of soil pH on soil carbonic anhydrase activity

NASA Astrophysics Data System (ADS)

Sauze, Joana; Jones, Sam P.; Wingate, Lisa; Wohl, Steven; Ogée, Jérôme

2018-01-01

Carbonic anhydrases (CAs) are metalloenzymes present in plants and microorganisms that catalyse the interconversion of CO2 and water to bicarbonate and protons. Because oxygen isotopes are also exchanged during this reaction, the presence of CA also modifies the contribution of soil and plant CO18O fluxes to the global budget of atmospheric CO18O. The oxygen isotope signatures (δ18O) of these fluxes differ as leaf water pools are usually more enriched than soil water pools, and this difference is used to partition the net CO2 flux over land into soil respiration and plant photosynthesis. Nonetheless, the use of atmospheric CO18O as a tracer of land surface CO2 fluxes requires a good knowledge of soil CA activity. Previous studies have shown that significant differences in soil CA activity are found in different biomes and seasons, but our understanding of the environmental and ecological drivers responsible for the spatial and temporal patterns observed in soil CA activity is still limited. One factor that has been overlooked so far is pH. Soil pH is known to strongly influence microbial community composition, richness and diversity in addition to governing the speciation of CO2 between the different carbonate forms. In this study we investigated the CO2-H2O isotopic exchange rate (kiso) in six soils with pH varying from 4.5 to 8.5. We also artificially increased the soil CA concentration to test how pH and other soil properties (texture and phosphate content) affected the relationship between kiso and CA concentration. We found that soil pH was the primary driver of kiso after CA addition and that the chemical composition (i.e. phosphate content) played only a secondary role. We also found an offset between the δ18O of the water pool with which CO2 equilibrates and total soil water (i.e. water extracted by vacuum distillation) that varied with soil texture. The reasons for this offset are still unknown.

Hydrous pyrolysis/oxidation process for in situ destruction of chlorinated hydrocarbon and fuel hydrocarbon contaminants in water and soil

DOEpatents

Knauss, Kevin G.; Copenhaver, Sally C.; Aines, Roger D.

2000-01-01

In situ hydrous pyrolysis/oxidation process is useful for in situ degradation of hydrocarbon water and soil contaminants. Fuel hydrocarbons, chlorinated hydrocarbons, polycyclic aromatic hydrocarbons, petroleum distillates and other organic contaminants present in the soil and water are degraded by the process involving hydrous pyrolysis/oxidation into non-toxic products of the degradation. The process uses heat which is distributed through soils and water, optionally combined with oxygen and/or hydrocarbon degradation catalysts, and is particularly useful for remediation of solvent, fuel or other industrially contaminated sites.

Evidence that the reactivity of the martian soil is due to superoxide ions

NASA Technical Reports Server (NTRS)

Yen, A. S.; Kim, S. S.; Hecht, M. H.; Frant, M. S.; Murray, B.

2000-01-01

The Viking Landers were unable to detect evidence of life on Mars but, instead, found a chemically reactive soil capable of decomposing organic molecules. This reactivity was attributed to the presence of one or more as-yet-unidentified inorganic superoxides or peroxides in the martian soil. Using electron paramagnetic resonance spectroscopy, we show that superoxide radical ions (O2-) form directly on Mars-analog mineral surfaces exposed to ultraviolet radiation under a simulated martian atmosphere. These oxygen radicals can explain the reactive nature of the soil and the apparent absence of organic material at the martian surface.

Mars Aqueous Processing System

NASA Technical Reports Server (NTRS)

Berggren, Mark; Wilson, Cherie; Carrera, Stacy; Rose, Heather; Muscatello, Anthony; Kilgore, James; Zubrin, Robert

2012-01-01

The goal of the Mars Aqueous Processing System (MAPS) is to establish a flexible process that generates multiple products that are useful for human habitation. Selectively extracting useful components into an aqueous solution, and then sequentially recovering individual constituents, can obtain a suite of refined or semi-refined products. Similarities in the bulk composition (although not necessarily of the mineralogy) of Martian and Lunar soils potentially make MAPS widely applicable. Similar process steps can be conducted on both Mars and Lunar soils while tailoring the reaction extents and recoveries to the specifics of each location. The MAPS closed-loop process selectively extracts, and then recovers, constituents from soils using acids and bases. The emphasis on Mars involves the production of useful materials such as iron, silica, alumina, magnesia, and concrete with recovery of oxygen as a byproduct. On the Moon, similar chemistry is applied with emphasis on oxygen production. This innovation has been demonstrated to produce high-grade materials, such as metallic iron, aluminum oxide, magnesium oxide, and calcium oxide, from lunar and Martian soil simulants. Most of the target products exhibited purities of 80 to 90 percent or more, allowing direct use for many potential applications. Up to one-fourth of the feed soil mass was converted to metal, metal oxide, and oxygen products. The soil residue contained elevated silica content, allowing for potential additional refining and extraction for recovery of materials needed for photovoltaic, semiconductor, and glass applications. A high-grade iron oxide concentrate derived from lunar soil simulant was used to produce a metallic iron component using a novel, combined hydrogen reduction/metal sintering technique. The part was subsequently machined and found to be structurally sound. The behavior of the lunar-simulant-derived iron product was very similar to that produced using the same methods on a Michigan iron ore concentrate, which demonstrates that lunar-derived material can be used in a manner similar to conventional terrestrial iron. Metallic iron was also produced from the Mars soil simulant. The aluminum and magnesium oxide products produced by MAPS from lunar and Mars soil simulants exhibited excellent thermal stability, and were shown to be capable of use for refractory oxide structural materials, or insulation at temperatures far in excess of what could be achieved using unrefined soils. These materials exhibited the refractory characteristics needed to support iron casting and forming operations, as well as other thermal processing needs. Extraction residue samples contained up to 79 percent silica. Such samples were successfully fused into a glass that exhibited high light transmittance.

Magnetic Susceptibility Measurements for in Situ Characterization of Lunar Soil

NASA Technical Reports Server (NTRS)

Oder, R. R.

1992-01-01

Magnetic separation is a viable method for concentration of components of lunar soils and rocks for use as feedstocks for manufacture of metals, oxygen, and for recovery of volatiles such as He-3. Work with lunar materials indicates that immature soils are the best candidates for magnetic beneficiation. The magnetic susceptibility at which selected soil components such as anorthite, ilmenite, or metallic iron are separated is not affected by soil maturity, but the recovery of the concentrated components is. Increasing soil maturity lowers recovery. Mature soils contain significant amounts of glass-encased metallic iron. Magnetic susceptibility, which is sensitive to metallic iron content, can be used to measure soil maturity. The relationship between the ratio of magnetic susceptibility and iron oxide and the conventional maturity parameter, I(sub s)/FeO, ferromagnetic resonant intensity divided by iron oxide content is given. The magnetic susceptibilities were determined using apparatus designed for magnetic separation of the lunar soils.

Using stable isotopes to resolve eco-hydrological dynamics of soil-plant-atmosphere feedbacks

NASA Astrophysics Data System (ADS)

Dubbert, M.; Piayda, A.; Kübert, A.; Cuntz, M.; Werner, C.

2016-12-01

Water is the main driver of ecosystem productivity in most terrestrial ecosystems worldwide. Extreme events are predicted to increase in frequency in many regions and dynamic responses in soil-vegetation-atmosphere feedbacks play a privotal role in understanding the ecosystem water balance and functioning. In this regard, more interdisciplinary approaches, bridging hydrology, ecophysiology and atmospheric sciences are needed and particularly water stable isotopes are a powerful tracer of water transfer in soils and at the soil-plant interface (Werner and Dubbert 2016). Here, we present observations 2 different ecosystems. Water fluxes, atmospheric concentrations and their isotopic compositions were measured using laser spectroscopy. Soil moisture and its isotopic composition in several depths as well as further water sources in the ecosystem were monitored throughout the year. Using these isotopic approaches we disentangled soil-plant-atmosphere feedback processes controlling the ecosystem water cycle including vegetation effects on soil water infiltration and distribution, event water use of vegetation and soil fluxes, vegetational soil water uptake depths plasticity and partitioning of ecosystem water fluxes. In this regard, we review current strategies of ET partitioning and highlight pitfalls in the presented strategies (Dubbert et al. 2013, Dubbert et al.2014a). We demonstrate that vegetation strongly influenced water cycling, altering infiltration and distribution of precipitation. In conclusion, application of stable water isotope tracers delivers a process based understanding of interactions between soil, understorey and trees governing ecosystem water cycling necessary for prediction of climate change impact on ecosystem productivity and vulnerability. ReferencesDubbert, M. et al. (2013): Partitioning evapotranspiration - Testing the Craig and Gordon model with field measurements of oxygen isotope ratios of evaporative fluxes. Journal of Hydrology Dubbert, M. et al. (2014a): Oxygen isotope signatures of transpired water vapor: the role of isotopic non-steady-state transpiration under natural conditions. New Phytologist. Werner, C. and Dubbert, M. (2016): Resolving rapid dynamics of soil-plant-atmosphere interactions. New Phytologist.

Relevance of anisotropy and spatial variability of gas diffusivity for soil-gas transport

NASA Astrophysics Data System (ADS)

Schack-Kirchner, Helmer; Kühne, Anke; Lang, Friederike

2017-04-01

Models of soil gas transport generally do not consider neither direction dependence of gas diffusivity, nor its small-scale variability. However, in a recent study, we could provide evidence for anisotropy favouring vertical gas diffusion in natural soils. We hypothesize that gas transport models based on gas diffusion data measured with soil rings are strongly influenced by both, anisotropy and spatial variability and the use of averaged diffusivities could be misleading. To test this we used a 2-dimensional model of soil gas transport to under compacted wheel tracks to model the soil-air oxygen distribution in the soil. The model was parametrized with data obtained from soil-ring measurements with its central tendency and variability. The model includes vertical parameter variability as well as variation perpendicular to the elongated wheel track. Different parametrization types have been tested: [i)]Averaged values for wheel track and undisturbed. em [ii)]Random distribution of soil cells with normally distributed variability within the strata. em [iii)]Random distributed soil cells with uniformly distributed variability within the strata. All three types of small-scale variability has been tested for [j)] isotropic gas diffusivity and em [jj)]reduced horizontal gas diffusivity (constant factor), yielding in total six models. As expected the different parametrizations had an important influence to the aeration state under wheel tracks with the strongest oxygen depletion in case of uniformly distributed variability and anisotropy towards higher vertical diffusivity. The simple simulation approach clearly showed the relevance of anisotropy and spatial variability in case of identical central tendency measures of gas diffusivity. However, until now it did not consider spatial dependency of variability, that could even aggravate effects. To consider anisotropy and spatial variability in gas transport models we recommend a) to measure soil-gas transport parameters spatially explicit including different directions and b) to use random-field stochastic models to assess the possible effects for gas-exchange models.

[Effect of different N, P and K fertilizers on soil pH and available Cd under waterlogged conditions].

PubMed

Jia, Ka-La-Tie; Yu, Hua; Feng, Wen-Qiang; Qin, Yu-Sheng; Zhao, Jing; Liao, Ming-Lan; Wang, Chang-Quan; Tu, Shi-Hua

2009-11-01

In order to tackle the problem of Cd pollution in paddy soils and investigate soil available Cd as affected by different fertilizers, incubation experiments were carried out to study the effects of different N, P and K fertilizers and pH by adding acid or base on soil available Cd under waterlogged conditions. Results revealed that soil pH increased sharply after the soil was flooded, especially at the beginning of incubation, and gradually decreased with incubation time and finally tended to approach the neutral values. The patterns of soil pH change were just opposite to those of soil available Cd, a negative correlation observed between the two. Soil flooding made the soil available Cd drop by 58.2%-84.1%. There were significant differences between different fertilizer types/varieties on soil available Cd, being most complex with N fertilizers and followed by K and P fertilizers. Among the fertilizers studied, ammonium chloride showed the unique ability in reducing soil pH and enhancing soil available Cd, and urea, single super phosphate and potassium chloride also promoted to a less extent amounts of Cd extracted from the soil. Ammonium sulfate, potassium sulfate and mono-ammonium phosphate significantly decreased soil available Cd compared to the CK treatment. Whether or not the soil was flooded, soil available Cd was highly negatively correlated with soil pH after adding acid or base (R = - 0.994 without incubation and R = - 0.919 after incubation for 60 d). The results further suggest that in the Cd polluted paddy soil, use of ammonium chloride should be avoided, S bearing fertilizers in combination with alkaline materials can be adopted, and the rice field should be flooded all the time during growing season, all the these practices can effectively lower soil available Cd.

BOREAS TF-4 CO2 and CH4 Soil Profile Data from the SSA

NASA Technical Reports Server (NTRS)

Striegl, Robert; Wickland, Kimberly; Hall, Forrest G. (Editor); Conrad, Sara (Editor)

2000-01-01

The BOReal Ecosystem-Atmosphere Study Tower Flux (BOREAS TF-4) team measured distributions of carbon dioxide (CO2) and methane (CH4) concentrations for the upper 5 m of soil and unsaturated zone at the mature stand, upper 6 m at the 20-year-old stand, and the upper 1 m at the 8-year-old stand and clear cut area at the BOREAS Southern Study Area (SSA) during August 1993 to March 1995. Particle size and carbon content of the unsaturated deposits, precipitation, soil temperature and moisture, carbon and oxygen isotopes of soil CO2, and soil water chemistry are also presented. The data are stored in tabular ASCII files.

NASA Tech Briefs, February 2004

NASA Technical Reports Server (NTRS)

2004-01-01

Topics include: Simulation Testing of Embedded Flight Software; Improved Indentation Test for Measuring Nonlinear Elasticity; Ultraviolet-Absorption Spectroscopic Biofilm Monitor; Electronic Tongue for Quantitation of Contaminants in Water; Radar for Measuring Soil Moisture Under Vegetation; Modular Wireless Data-Acquisition and Control System; Microwave System for Detecting Ice on Aircraft; Routing Algorithm Exploits Spatial Relations; Two-Finger EKG Method of Detecting Evasive Responses; Updated System-Availability and Resource-Allocation Program; Routines for Computing Pressure Drops in Venturis; Software for Fault-Tolerant Matrix Multiplication; Reproducible Growth of High-Quality Cubic-SiC Layers; Nonlinear Thermoelastic Model for SMAs and SMA Hybrid Composites; Liquid-Crystal Thermosets, a New Generation of High-Performance Liquid-Crystal Polymers; Formulations for Stronger Solid Oxide Fuel-Cell Electrolytes; Simulation of Hazards and Poses for a Rocker-Bogie Rover; Autonomous Formation Flight; Expandable Purge Chambers Would Protect Cryogenic Fittings; Wavy-Planform Helicopter Blades Make Less Noise; Miniature Robotic Spacecraft for Inspecting Other Spacecraft; Miniature Ring-Shaped Peristaltic Pump; Compact Plasma Accelerator; Improved Electrohydraulic Linear Actuators; A Software Architecture for Semiautonomous Robot Control; Fabrication of Channels for Nanobiotechnological Devices; Improved Thin, Flexible Heat Pipes; Miniature Radioisotope Thermoelectric Power Cubes; Permanent Sequestration of Emitted Gases in the Form of Clathrate Hydrates; Electrochemical, H2O2-Boosted Catalytic Oxidation System; Electrokinetic In Situ Treatment of Metal-Contaminated Soil; Pumping Liquid Oxygen by Use of Pulsed Magnetic Fields; Magnetocaloric Pumping of Liquid Oxygen; Tailoring Ion-Thruster Grid Apertures for Greater Efficiency; and Lidar for Guidance of a Spacecraft or Exploratory Robot.

RESOLVE: Regolith and Environment Science and Oxygen and Lunar Volatile Extraction

NASA Technical Reports Server (NTRS)

Quinn, Jacqueline; Baird, Scott; Colaprete, Anthony; Larson, William; Sanders, Gerald; Picard, Martin

2011-01-01

Regolith & Environment Science and Oxygen & Lunar Volatile Extraction (RESOLVE) is an internationally developed payload that is intended to prospect for resources on other planetary bodies. RESOLVE is a miniature drilling and chemistry plant packaged onto a medium-sized rover to collect and analyze soil for volatile components such as water or hydrogen that could be used in human exploration efforts.

Draft genome sequence of Bacillus azotoformans MEV2011, a (Co-) denitrifying strain unable to grow with oxygen.

PubMed

Nielsen, Maja; Schreiber, Lars; Finster, Kai; Schramm, Andreas

2015-01-01

Bacillus azotoformans MEV2011, isolated from soil, is a microaerotolerant obligate denitrifier, which can also produce N2 by co-denitrification. Oxygen is consumed but not growth-supportive. The draft genome has a size of 4.7 Mb and contains key genes for both denitrification and dissimilatory nitrate reduction to ammonium.

Draft genome sequence of Bacillus azotoformans MEV2011, a (Co-) denitrifying strain unable to grow with oxygen.

PubMed

Nielsen, Maja; Schreiber, Lars; Finster, Kai; Schramm, Andreas

2014-01-01

Bacillus azotoformans MEV2011, isolated from soil, is a microaerotolerant obligate denitrifier, which can also produce N2 by co-denitrification. Oxygen is consumed but not growth-supportive. The draft genome has a size of 4.7 Mb and contains key genes for both denitrification and dissimilatory nitrate reduction to ammonium.

Draft genome sequence of Bacillus azotoformans MEV2011, a (Co-) denitrifying strain unable to grow with oxygen

PubMed Central

2014-01-01

Bacillus azotoformans MEV2011, isolated from soil, is a microaerotolerant obligate denitrifier, which can also produce N2 by co-denitrification. Oxygen is consumed but not growth-supportive. The draft genome has a size of 4.7 Mb and contains key genes for both denitrification and dissimilatory nitrate reduction to ammonium. PMID:25685261

Organic matter and salinity modify cadmium soil (phyto)availability.

PubMed

Filipović, Lana; Romić, Marija; Romić, Davor; Filipović, Vilim; Ondrašek, Gabrijel

2018-01-01

Although Cd availability depends on its total concentration in soil, it is ultimately defined by the processes which control its mobility, transformations and soil solution speciation. Cd mobility between different soil fractions can be significantly affected by certain pedovariables such as soil organic matter (SOM; over formation of metal-organic complexes) and/or soil salinity (over formation of metal-inorganic complexes). Phytoavailable Cd fraction may be described as the proportion of the available Cd in soil which is actually accessible by roots and available for plant uptake. Therefore, in a greenhouse pot experiment Cd availability was observed in the rhizosphere of faba bean exposed to different levels of SOM, NaCl salinity (50 and 100mM) and Cd contamination (5 and 10mgkg -1 ). Cd availability in soil does not linearly follow its total concentration. Still, increasing soil Cd concentration may lead to increased Cd phytoavailability if the proportion of Cd 2+ pool in soil solution is enhanced. Reduced Cd (phyto)availability by raised SOM was found, along with increased proportion of Cd-DOC complexes in soil solution. Data suggest decreased Cd soil (phyto)availability with the application of salts. NaCl salinity affected Cd speciation in soil solution by promoting the formation of CdCl n 2-n complexes. Results possibly suggest that increased Cd mobility in soil does not result in its increased availability if soil adsorption capacity for Cd has not been exceeded. Accordingly, chloro-complex possibly operated just as a Cd carrier between different soil fractions and resulted only in transfer between solid phases and not in increased (phyto)availability. Copyright © 2017 Elsevier Inc. All rights reserved.

Soil as the Central Link in the Hydrological Cycle

NASA Astrophysics Data System (ADS)

Hillel, D.

2005-05-01

We present an overview of the function fulfilled by the soil in the chain of processes constituting the hydrological cycle in the terrestrial domain. Considering the height of the atmosphere, the thickness of the earth's rock mantle, and the depth of the ocean, we note that the soil is amazingly thin -- typically not much more than one meter thick. Yet, with its sponge-like porosity, internal surface area, and finite capacities to absorb, store, and transmit water and solutes, the soil determines the fate of precipitation reaching the ground surface - whether it flows over the land as runoff, is detained and made available to plant roots, or seeps downward to an aquifer. Without the soil as a buffer, rainfall would produce violent floods rather than sustained stream-flow. The soil also acts as a living filter, in which dissolved and suspended constituents are retained or transmuted into nutrients for the continual regeneration of life. Energy as well as matter is in constant flux as solar radiation is absorbed by the soil and growing plants and as heat is exchanged in evaporation and condensation as well as in biochemical reactions. Plant leaves absorb carbon dioxide from the air and synthesize it with soil-derived water to form the primary compounds of life, while oxygen emitted by the leaves makes the air breathable for animals, which in turn fertilize the plants. However unique in form and function, the soil is not an isolated body but interacts with the overlying atmosphere and underlying strata, and with surface and underground bodies of water. Especially important is the interrelation between the soil and the climate, enhancing or mitigating the greenhouse effect via the soil's uptake or release of radiatively active gases (carbon dioxide, methane, and nitrous oxide). For all these reasons, it is vital that we give full consideration to the soil's role in the context of hydrology. The problem to overcome, however, is the disjunct between the characteristic spatial scales of the two disciplines. Whereas hydrology typically operates on the watershed level, traditional soil science has dealt with phenomena on the scale of a vertical profile or a restricted field. Recent efforts to define soil processes in a catenary sequence in the landscape and concurrent efforts to define the spatial variability of soil properties offer a way to close the gap and thus integrate the sister sciences.

The assessment of treated wastewater quality and the effects of mid-term irrigation on soil physical and chemical properties (case study: Bandargaz-treated wastewater)

NASA Astrophysics Data System (ADS)

Kaboosi, Kami

2017-09-01

This study was conducted to investigate the characteristics of inflow and outflow wastewater of the Bandargaz wastewater treatment plant on the basis of the data collection of operation period and the samples taken during the study. Also the effects of mid-term use of the wastewater for irrigation (from 2005 to 2013) on soil physical and chemical characteristics were studied. For this purpose, 4 samples were taken from the inflow and outflow wastewater and 25 quality parameters were measured. Also, the four soil samples from a depth of 0-30 cm of two rice field irrigated with wastewater in the beginning and middle of the planting season and two samples from one adjacent rice field irrigated with fresh water were collected and their chemical and physical characteristics were determined. Average of electrical conductivity, total dissolved solids, sodium adsorption ratio, chemical oxygen demand and 5 days biochemical oxygen demand in treated wastewater were 1.35 dS/m, 707 ppm, 0.93, 80 ppm and 40 ppm, respectively. Results showed that although some restrictions exist about chlorine and bicarbonate, the treated wastewater is suitable for irrigation based on national and international standards and criteria. In comparison with fresh water, the mid-term use of wastewater caused a little increase of soil salinity. However, it did not lead to increase of soil salinity beyond rice salinity threshold. Also, there were no restrictions on soil in the aspect of salinity and sodium hazard on the basis of many irrigated soil classifications. In comparison with fresh water, the mid-term use of wastewater caused the increase of total N, absorbable P and absorbable K in soil due to high concentration of those elements in treated wastewater.

Inhibition of tomato shoot growth by over-irrigation is linked to nitrogen deficiency and ethylene.

PubMed

Fiebig, Antje; Dodd, Ian C

2016-01-01

Although physiological effects of acute flooding have been well studied, chronic effects of suboptimal soil aeration caused by over-irrigation of containerized plants have not, despite its likely commercial significance. By automatically scheduling irrigation according to soil moisture thresholds, effects of over-irrigation on soil properties (oxygen concentration, temperature and moisture), leaf growth, gas exchange, phytohormone [abscisic acid (ABA) and ethylene] relations and nutrient status of tomato (Solanum lycopersicum Mill. cv. Ailsa Craig) were studied. Over-irrigation slowly increased soil moisture and decreased soil oxygen concentration by 4%. Soil temperature was approximately 1°C lower in the over-irrigated substrate. Over-irrigating tomato plants for 2 weeks significantly reduced shoot height (by 25%) and fresh weight and total leaf area (by 60-70%) compared with well-drained plants. Over-irrigation did not alter stomatal conductance, leaf water potential or foliar ABA concentrations, suggesting that growth inhibition was not hydraulically regulated or dependent on stomatal closure or changes in ABA. However, over-irrigation significantly increased foliar ethylene emission. Ethylene seemed to inhibit growth, as the partially ethylene-insensitive genotype Never ripe (Nr) was much less sensitive to over-irrigation than the wild type. Over-irrigation induced significant foliar nitrogen deficiency and daily supplementation of small volumes of 10 mM Ca(NO3 )2 to over-irrigated soil restored foliar nitrogen concentrations, ethylene emission and shoot fresh weight of over-irrigated plants to control levels. Thus reduced nitrogen uptake plays an important role in inhibiting growth of over-irrigated plants, in part by stimulating foliar ethylene emission. © 2015 Scandinavian Plant Physiology Society.

Optimal Thermolysis Conditions for Soil Carbon Storage on Plant Residue Burning: Modeling the Trade-Off between Thermal Decomposition and Subsequent Biodegradation.

PubMed

Kajiura, Masako; Wagai, Rota; Hayashi, Kentaro

2015-01-01

Field burning of plant biomass is a widespread practice that provides charred materials to soils. Its impact on soil C sequestration remains unclear due to the heterogeneity of burning products and difficulty in monitoring the material's biodegradation in fields. Basic information is needed on the relationship between burning conditions and the resulting quantity/quality of residue-derived C altered by thermal decomposition and biodegradation. In this study, we thermolyzed residues (rice straw and husk) at different temperatures (200-600°C) under two oxygen availability conditions and measured thermal mass loss, C compositional change by solid-state C NMR spectroscopy, and biodegradability of the thermally altered residues by laboratory aerobic incubation. A trade-off existed between thermal and microbial decomposition: when burned at higher temperatures, residues experience a greater mass loss but become more recalcitrant via carbonization. When an empirical model accounting for the observed trade-off was projected over 10 to 10 yr, we identified the threshold temperature range (330-400°C) above and below which remaining residue C is strongly reduced. This temperature range corresponded to the major loss of O-alkyl C and increase in aromatic C. The O/C molar ratios of the resultant residues decreased to 0.2 to 0.4, comparable to those of chars in fire-prone field soils reported previously. Although the negative impacts of biomass burning need to be accounted for, the observed relationship may help to assess the long-term fate of burning-derived C and to enhance soil C sequestration. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Effect of intermediate soil cover on municipal solid waste decomposition.

PubMed

Márquez-Benavides, L; Watson-Craik, I

2003-01-01

A complex series of chemical and microbiological reactions is initiated with the burial of refuse in a sanitary landfill. At the end of each labour day, the municipal solid wastes (MSW) are covered with native soil (or an alternative material). To investigate interaction between the intermediate cover and the MSW, five sets of columns were set up, one packed with refuse only, and four with a soil-refuse mixture (a clay loam, an organic-rich peaty soil, a well limed sandy soil and a chalky soil). The anaerobic degradation over 6 months was followed in terms of leachate volatile fatty acids, chemical oxygen demand, pH and ammoniacal-N performance. Results suggest that the organic-rich peaty soil may accelerate the end of the acidogenic phase. Clay appeared not to have a significant effect on the anaerobic degradation process.

Root distribution of Nitraria sibirica with seasonally varying water sources in a desert habitat.

PubMed

Zhou, Hai; Zhao, Wenzhi; Zheng, Xinjun; Li, Shoujuan

2015-07-01

In water-limited environments, the water sources used by desert shrubs are critical to understanding hydrological processes. Here we studied the oxygen stable isotope ratios (δ (18)O) of stem water of Nitraria sibirica as well as those of precipitation, groundwater and soil water from different layers to identify the possible water sources for the shrub. The results showed that the shrub used a mixture of soil water, recent precipitation and groundwater, with shallow lateral roots and deeply penetrating tap (sinker) roots, in different seasons. During the wet period (in spring), a large proportion of stem water in N. sibirica was from snow melt and recent precipitation, but use of these sources declined sharply with the decreasing summer rain at the site. At the height of summer, N. sibirica mainly utilized deep soil water from its tap roots, not only supporting the growth of shoots but also keeping the shallow lateral roots well-hydrated. This flexibility allowed the plants to maintain normal metabolic processes during prolonged periods when little precipitation occurs and upper soil layers become extremely dry. With the increase in precipitation that occurs as winter approaches, the percentage of water in the stem base of a plant derived from the tap roots (deep soil water or ground water) decreased again. These results suggested that the shrub's root distribution and morphology were the most important determinants of its ability to utilize different water sources, and that its adjustment to water availability was significant for acclimation to the desert habitat.

Nitrate behaviors and its transportation time scale in unsaturated zone under farmlands with different fertilization log in Kumamoto region, southern Japan

NASA Astrophysics Data System (ADS)

Okumura, Azusa; Hosono, Takahiro; Shimada, Jun

2017-04-01

An application of fertilizers and manure often caused an increase of nitrate concentration in groundwater in the agricultural area. The study area, Kumamoto, is the field facing this type of problem. Previous studies using nitrogen-oxygen isotope ratios in nitrate showed that accumulation of chemical fertilizers is the major factor for observed nitrate contamination. However, once it loaded nitrogen compounds may change its form and isotopic composition during transportation within unsaturation zone prior to reach the aquifer. However, such kind of knowledge is still rarely accumulated. To clarify the behavior and transportation manner of nitrogen in the unsaturated zone, we analyzed the nitrogen-oxygen isotope ratios of the extracted soil water of the unsaturated zone soils from the farmland having different fertilization logs. In addition, we attempted to verify the origin of nitrate in soil water by comparing with previous isotopic results. The plateaus-like topography of the study area is consists of the pyroclastic flow deposits. Land use is mainly farmland and this area is a major source of nitrogen load and transport route into the aquifer. Nitrate concentration in groundwater at terraces recharge area has been reported about 40 mg/L. Drilling survey carried out in the unsaturated zone soil on 4 farmlands with the different land use logs in such terraces. Drilling points S1 and S2 were treated by both slurry and chemical fertilizers, on the other hand, point C1 and C2 were applied chemical fertilizers only. The drilling depth was up to 14-15 m, and soil samples were kept on evacuated condition after sectioning into 10 cm interval. The soil water was extracted using a centrifuge machine. The extracted soil water was measured for the nitrogen-oxygen isotope ratios in nitrate and major ions concentrations. All cores showed high nitrate concentrations in the surface layer (260, 440, 172 and 244 mg/L for S1, S2, C1, and C2 respectively). The concentrations became lower downwards for all cores. However, the concentrations were still high even at the point of 10 m (about 100-200 mg/L) for all cores. In the S1 and S2 cores nitrogen and oxygen isotopic results indicated occurrence of volatilization and nitrification in the surface layer, but in the C1 and C2 cores this signature was not clearly shown. The isotope compositions become homogenized downwards to have specific values depending on fertilization logs. This result is consistent with the previous studies. In the presentation, we will present detailed discussions regarding the behaviors of the isotope ratios in nitrate.

Environmental pollution and health hazards from distillery wastewater and treatment approaches to combat the environmental threats: A review.

PubMed

Chowdhary, Pankaj; Raj, Abhay; Bharagava, Ram Naresh

2018-03-01

Distillery industries are the key contributor to the world's economy, but these are also one of the major sources of environmental pollution due to the discharge of a huge volume of dark colored wastewater. This dark colored wastewater contains very high biological oxygen demand, chemical oxygen demand, total solids, sulfate, phosphate, phenolics and various toxic metals. Distillery wastewater also contains a mixture of organic and inorganic pollutants such as melanoidins, di-n-octyl phthalate, di-butyl phthalate, benzenepropanoic acid and 2-hydroxysocaproic acid and toxic metals, which are well reported as genotoxic, carcinogenic, mutagenic and endocrine disrupting in nature. In aquatic resources, it causes serious environmental problems by reducing the penetration power of sunlight, photosynthetic activities and dissolved oxygen content. On other hand, in agricultural land, it causes inhibition of seed germination and depletion of vegetation by reducing the soil alkalinity and manganese availability, if discharged without adequate treatment. Thus, this review article provides a comprehensive knowledge on the distillery wastewater pollutants, various techniques used for their analysis as well as its toxicological effects on environments, human and animal health. In addition, various physico-chemicals, biological as well as emerging treatment methods have been also discussed for the protection of environment, human and animal health. Copyright © 2017 Elsevier Ltd. All rights reserved.

Impact of ancient charcoal kilns on chemical properties of several forest soils after 2 centuries

NASA Astrophysics Data System (ADS)

Dufey, Joseph; Hardy, Brieuc; Cornelis, Jean-Thomas

2014-05-01

Pyrogenic carbon plays a major role in soil biogeochemical processes and carbon budgets. Until the early 19th century, charcoal was the unique combustible used for iron metallurgy in Wallonia (Belgium). Traditional charcoal kilns were built directly in the forest: wood logs were piled into a mound and isolated from air oxygen with a covering of vegetation residues and soil before setting fire, inducing wood pyrolysis. Nowadays, ancient wood-charring platforms are still easy to identify on the forest floor as heightened domes of 10 meters in diameter characterized by a very dark topsoil horizon containing charcoal dust and fragments. Our goal is to assess the effects of wood charring at mound kiln sites on the properties of various forest soil types in Wallonia (Belgium), after two centuries. We sampled soil by horizon in 18 ancient kiln sites to 1.20 meter depth. The adjacent charcoal-unaffected soils were sampled the same way. We also collected recent charcoal fragments and topsoil samples from a still active charcoal kiln located close to Dole (France) to apprehend the evolution of soil properties over time. The pH, total carbon (C) and nitrogen (N) content, available phosphorus (Pav), cation exchange capacity at pH 7 (CEC), exchangeable cations (Ca++, Mg++, K+, Na+) and loss on ignition at 550°C (LI550) were measured on each soil sample. We separated the soil profiles in 5 groups based on the nature of soil substrate and pedogenesis for interpretation of the results. We show that the total carbon stock is significantly increased at kiln sites due to higher C concentrations and greater depth of the organo-mineral horizon. The C/N ratio in charcoal-enriched soil horizons is significantly higher than in the neighboring reference soils but clearly attenuated compared to pure wood-charcoal fragments. The CEC is higher in the charcoal-enriched soil horizons, not only due to higher C concentrations but also to increased CEC by carbon unit at kiln sites. The high negative charge of charcoal results from surface oxidation processes over time. This charge varies over quite a wide range of values according to soil type, which might be explained by the nature of the charred wood. The surface soil horizons at kiln site show a completely desaturated exchange complex, comparable to the reference soils. However, the raise of the base saturation in the underlying horizons reflects the past liming effect of ashes produced by wood charring that has been completely erased from the topsoil in 200 years. Exchangeable K+ in the topsoil layers of kiln sites is very low, which can be related to an enhanced selectivity for Mg++ and Ca++ on the exchange complex of old charred material. Similarly, very little Pav is extracted from charcoal-enriched horizons, suggesting that Pav is either reduced in quantity or in availability. Our data clearly highlight the long-term effect of the accumulation of charred material on the evolution of soil chemical properties due to charcoal ageing and nutrient leaching.

[Phosphorus availability in cropland soils of China and related affecting factors].

PubMed

Wang, Yong-Zhuang; Chen, Xin; Shi, Yi

2013-01-01

Soil phosphorus (P) availability directly determines cropland productivity. Based on the long-term fertilization experiments in different climatic zones of China, this paper summarized the P content, its availability, and the factors affecting the P transformation in China cropland soils. The total and available P contents in different types of China cropland soils were 0.31-1.72 g x kg(-1) and 0.1-228.8 mg x kg(-1), respectively. Soil parent material, soil physical and chemical prosperities, and fertilization practices were the main factors affecting the soil P availability. It was suggested that more attentions should be paid on the mixed application of organic manure and chemical fertilizers to improve the P availability of cropland soils and on the potential environmental impacts of this fertilization.

Aerobic Biodegradation of Alternative Fuel Oxygenates in Unsaturated Soil Columns

DTIC Science & Technology

2004-03-01

transport of oxygenates in the environment. This includes an understanding of the occurrence of ethanol-utilizing bacteria , the metabolic pathways...central metabolic pathways of bacteria are generally rapidly biodegraded. In this regard, after a limited number of metabolic reactions, ethanol is...ethanol was demonstrated in laboratory screening exercises that identified 363 strains of bacteria capable of growing on 1.5% ethanol (Okumura, 1975

Effects of domestic wastewater treated by anaerobic stabilization on soil pollution, plant nutrition, and cotton crop yield.

PubMed

Uzen, Nese; Cetin, Oner; Unlu, Mustafa

2016-12-01

This study has aimed to determine the effects of treated wastewater on cotton yield and soil pollution in Southeastern Anatolia Region of Turkey during 2011 and 2012. The treated wastewater was provided from the reservoir operated as anaerobic stabilization. After treatment, suspended solids (28-60 mg/l), biological oxygen demand (29-30 mg/l), and chemical oxygen demand (71-112 mg/l) decreased significantly compared to those in the wastewater. There was no heavy metal pollution in the water used. There were no significant amounts of coliform bacteria, fecal coliform, and Escherichia coli compared to untreated wastewater. The cottonseed yield (31.8 g/plant) in the tanks where no commercial fertilizers were applied was considerably higher compared to the yield (17.2 g/plant) in the fertilized tanks where a common nitrogenous fertilizer was utilized. There were no significant differences between the values of soil pH. Soil electrical conductivity (EC) after the experiment increased from 0.8-1.0 to 0.9-1.8 dS/m. Heavy metal pollution did not occur in the soil and plants, because there were no heavy metals in the treated wastewater. It can be concluded that treated domestic wastewater could be used to grow in a controlled manner crops, such as cotton, that would not be used directly as human nutrients.

Modelling the effect of soil moisture and organic matter degradation on biogenic NO emissions from soils in Sahel rangeland (Mali)

NASA Astrophysics Data System (ADS)

Delon, C.; Mougin, E.; Serça, D.; Grippa, M.; Hiernaux, P.; Diawara, M.; Galy-Lacaux, C.; Kergoat, L.

2015-06-01

This work is an attempt to provide seasonal variation of biogenic NO emission fluxes in a Sahelian rangeland in Mali (Agoufou, 15.34° N, 1.48° W) for years 2004, 2005, 2006, 2007 and 2008. Indeed, NO is one of the most important precursors for tropospheric ozone, and previous studies have shown that arid areas potentially display significant NO emissions (due to both biotic and abiotic processes). Previous campaigns in the Sahel suggest that the contribution of this region in emitting NO is no longer considered as negligible. However, very few data are available in this region, therefore this study focuses on model development. The link between NO production in the soil and NO release to the atmosphere is investigated in this modelling study, by taking into account vegetation litter production and degradation, microbial processes in the soil, emission fluxes, and environmental variables influencing these processes, using a coupled vegetation-litter decomposition-emission model. This model includes the Sahelian Transpiration Evaporation and Productivity (STEP) model for the simulation of herbaceous, tree leaf and faecal masses, the GENDEC model (GENeral DEComposition) for the simulation of the buried litter decomposition and microbial dynamics, and the NO emission model (NOFlux) for the simulation of the NO release to the atmosphere. Physical parameters (soil moisture and temperature, wind speed, sand percentage) which affect substrate diffusion and oxygen supply in the soil and influence the microbial activity, and biogeochemical parameters (pH and fertilization rate related to N content) are necessary to simulate the NO flux. The reliability of the simulated parameters is checked, in order to assess the robustness of the simulated NO flux. Simulated yearly average of NO flux ranges from 2.09 to 3.04 ng(N) m-2 s-1 (0.66 to 0.96 kg(N) ha-1 yr-1), and wet season average ranges from 3.36 to 5.48 ng(N) m-2 s-1 (1.06 to 1.73 kg(N) ha-1 yr-1). These results are of the same order as previous measurements made in several sites where the vegetation and the soil are comparable to the ones in Agoufou. This coupled vegetation-litter decomposition-emission model could be generalized at the scale of the Sahel region, and provide information where few data are available.

Azospirillum brasilense, a Beneficial Soil Bacterium: Isolation and Cultivation.

PubMed

Alexandre, Gladys

2017-11-09

Bacteria of the genus Azospirillum comprise 15 species to date, with A. brasilense the best studied species in the genus. Azospirillum are soil bacteria able to promote the growth of plants from 113 species spanning 35 botanical families. These non-pathogenic and beneficial bacteria are ubiquitous in soils and inhabit the roots of diverse plants. These bacteria are microaerophilic, able to fix nitrogen under free-living conditions, motile, and able to navigate in gradients of various chemicals, including oxygen. These physiological traits are used to isolate these soil bacteria from soil and plant root samples, providing isolates that can be used for studying microbial physiology and plant growth promotion. © 2017 by John Wiley & Sons, Inc. Copyright © 2017 John Wiley & Sons, Inc.

Effect of mineral surface properties (alumina, kaolinite) on the sorptive fractionation mechanisms of soil fulvic acids: Molecular-scale ESI-MS studies

NASA Astrophysics Data System (ADS)

Fleury, Guillaume; Del Nero, Mirella; Barillon, Rémi

2017-01-01

We addressed the effects of mineral surface properties (kaolinite versus Al-oxide) on the sorption-driven fractionation of a soil fulvic acid (FA) at acidic pH, mainly by means of ESI(-)-FTMS analysis of initial and supernatant solutions of FA sorption batch experiments. The MS data provided clear molecular-scale evidence of distinct mechanisms and molecular parameters controlling the FA fractionation upon its sorption on clay and oxide surfaces, respectively. Identification of sorbing and not-sorbing FA compounds in kaolinite-solution systems revealed a weak fractionation among members of sbnd CO2 series of aliphatics or not-condensed aromatics (NCAs) at pH 3.8, and almost no sorption of poorly-oxygenated polycyclic aromatic compounds (PACs) and NCAs. This first molecular-scale description of a FA fractionation in a clay-solution system suggests that H-bonding with low affinity sites (aluminol/silanol) on the basal planes of the clay particles is the main mechanism of sorption. Due to the predominance of such weak and poorly-selective mechanism, the sorption of aliphatic and NCA molecules bearing oxygenated functionalities was prevented at pH 5, due to dissolved Al competing successfully for their coordination. In contrast, a strong FA fractionation was observed onto alumina, with a preferential retention of PACs and highly-oxygenated aliphatics and NCAs. The major part of the poorly oxygenated aliphatics was left in solution. The sorption degree of NCAs and aliphatics was strongly correlated with molecular acidity. For PACs and poorly-oxygenated NCAs, the sorption was driven by reactions of surface ligand exchange (for the most oxygenated compounds) or by hydrophobic interactions (for the least oxygenated compounds).

Growth of Iron(III)-Reducing Bacteria on Clay Minerals as the Sole Electron Acceptor and Comparison of Growth Yields on a Variety of Oxidized Iron Forms†

PubMed Central

Kostka, Joel E.; Dalton, Dava D.; Skelton, Hayley; Dollhopf, Sherry; Stucki, Joseph W.

2002-01-01

Smectite clay minerals are abundant in soils and sediments worldwide and are typically rich in Fe. While recent investigations have shown that the structural Fe(III) bound in clay minerals is reduced by microorganisms, previous studies have not tested growth with clay minerals as the sole electron acceptor. Here we have demonstrated that a pure culture of Shewanella oneidensis strain MR-1 as well as enrichment cultures of Fe(III)-reducing bacteria from rice paddy soil and subsurface sediments are capable of conserving energy for growth with the structural Fe(III) bound in smectite clay as the sole electron acceptor. Pure cultures of S. oneidensis were used for more detailed growth rate and yield experiments on various solid- and soluble-phase electron acceptors [smectite, Fe(III) oxyhydroxide FeOOH, Fe(III) citrate, and oxygen] in the same minimal medium. Growth was assessed as direct cell counts or as an increase in cell carbon (measured as particulate organic carbon). Cell counts showed that similar growth of S. oneidensis (108 cells ml−1) occurred with smectitic Fe(III) and on other Fe forms [amorphous Fe(III) oxyhydroxide, and Fe citrate] or oxygen as the electron acceptor. In contrast, cell yields of S. oneidensis measured as the increase in cell carbon were similar on all Fe forms tested while yields on oxygen were five times higher, in agreement with thermodynamic predictions. Over a range of particle loadings (0.5 to 4 g liter−1), the increase in cell number was highly correlated to the amount of structural Fe in smectite reduced. From phylogenetic analysis of the complete 16S rRNA gene sequences, a predominance of clones retrieved from the clay mineral-reducing enrichment cultures were most closely related to the low-G+C gram-positive members of the Bacteria (Clostridium and Desulfitobacterium) and the δ-Proteobacteria (members of the Geobacteraceae). Results indicate that growth with smectitic Fe(III) is similar in magnitude to that with Fe(III) oxide minerals and is dependent upon the mineral surface area available. Iron(III) bound in clay minerals should be considered an important electron acceptor supporting the growth of bacteria in soils or sedimentary environments. PMID:12450850

The relative importance of vertical soil nutrient heterogeneity, and mean and depth-specific soil nutrient availabilities for tree species richness in tropical forests and woodlands.

PubMed

Shirima, Deo D; Totland, Ørjan; Moe, Stein R

2016-11-01

The relative importance of resource heterogeneity and quantity on plant diversity is an ongoing debate among ecologists, but we have limited knowledge on relationships between tree diversity and heterogeneity in soil nutrient availability in tropical forests. We expected tree species richness to be: (1) positively related to vertical soil nutrient heterogeneity; (2) negatively related to mean soil nutrient availability; and (3) more influenced by nutrient availability in the upper than lower soil horizons. Using a data set from 60, 20 × 40-m plots in a moist forest, and 126 plots in miombo woodlands in Tanzania, we regressed tree species richness against vertical soil nutrient heterogeneity, both depth-specific (0-15, 15-30, and 30-60 cm) and mean soil nutrient availability, and soil physical properties, with elevation and measures of anthropogenic disturbance as co-variables. Overall, vertical soil nutrient heterogeneity was the best predictor of tree species richness in miombo but, contrary to our prediction, the relationships between tree species richness and soil nutrient heterogeneity were negative. In the moist forest, mean soil nutrient availability explained considerable variations in tree species richness, and in line with our expectations, these relationships were mainly negative. Soil nutrient availability in the top soil layer explained more of the variation in tree species richness than that in the middle and lower layers in both vegetation types. Our study shows that vertical soil nutrient heterogeneity and mean availability can influence tree species richness at different magnitudes in intensively utilized tropical vegetation types.

Expression of root-related transcription factors associated with flooding tolerance of soybean (Glycine max).

PubMed

Valliyodan, Babu; Van Toai, Tara T; Alves, Jose Donizeti; de Fátima P Goulart, Patricia; Lee, Jeong Dong; Fritschi, Felix B; Rahman, Mohammed Atiqur; Islam, Rafiq; Shannon, J Grover; Nguyen, Henry T

2014-09-29

Much research has been conducted on the changes in gene expression of the model plant Arabidopsis to low-oxygen stress. Flooding results in a low oxygen environment in the root zone. However, there is ample evidence that tolerance to soil flooding is more than tolerance to low oxygen alone. In this study, we investigated the physiological response and differential expression of root-related transcription factors (TFs) associated with the tolerance of soybean plants to soil flooding. Differential responses of PI408105A and S99-2281 plants to ten days of soil flooding were evaluated at physiological, morphological and anatomical levels. Gene expression underlying the tolerance response was investigated using qRT-PCR of root-related TFs, known anaerobic genes, and housekeeping genes. Biomass of flood-sensitive S99-2281 roots remained unchanged during the entire 10 days of flooding. Flood-tolerant PI408105A plants exhibited recovery of root growth after 3 days of flooding. Flooding induced the development of aerenchyma and adventitious roots more rapidly in the flood-tolerant than the flood-sensitive genotype. Roots of tolerant plants also contained more ATP than roots of sensitive plants at the 7th and 10th days of flooding. Quantitative transcript analysis identified 132 genes differentially expressed between the two genotypes at one or more time points of flooding. Expression of genes related to the ethylene biosynthesis pathway and formation of adventitious roots was induced earlier and to higher levels in roots of the flood-tolerant genotype. Three potential flood-tolerance TFs which were differentially expressed between the two genotypes during the entire 10-day flooding duration were identified. This study confirmed the expression of anaerobic genes in response to soil flooding. Additionally, the differential expression of TFs associated with soil flooding tolerance was not qualitative but quantitative and temporal. Functional analyses of these genes will be necessary to reveal their potential to enhance flooding tolerance of soybean cultivars.

Expression of Root-Related Transcription Factors Associated with Flooding Tolerance of Soybean (Glycine max)

PubMed Central

Valliyodan, Babu; Van Toai, Tara T.; Alves, Jose Donizeti; de Fátima P. Goulart, Patricia; Lee, Jeong Dong; Fritschi, Felix B.; Rahman, Mohammed Atiqur; Islam, Rafiq; Shannon, J. Grover; Nguyen, Henry T.

2014-01-01

Much research has been conducted on the changes in gene expression of the model plant Arabidopsis to low-oxygen stress. Flooding results in a low oxygen environment in the root zone. However, there is ample evidence that tolerance to soil flooding is more than tolerance to low oxygen alone. In this study, we investigated the physiological response and differential expression of root-related transcription factors (TFs) associated with the tolerance of soybean plants to soil flooding. Differential responses of PI408105A and S99-2281 plants to ten days of soil flooding were evaluated at physiological, morphological and anatomical levels. Gene expression underlying the tolerance response was investigated using qRT-PCR of root-related TFs, known anaerobic genes, and housekeeping genes. Biomass of flood-sensitive S99-2281 roots remained unchanged during the entire 10 days of flooding. Flood-tolerant PI408105A plants exhibited recovery of root growth after 3 days of flooding. Flooding induced the development of aerenchyma and adventitious roots more rapidly in the flood-tolerant than the flood-sensitive genotype. Roots of tolerant plants also contained more ATP than roots of sensitive plants at the 7th and 10th days of flooding. Quantitative transcript analysis identified 132 genes differentially expressed between the two genotypes at one or more time points of flooding. Expression of genes related to the ethylene biosynthesis pathway and formation of adventitious roots was induced earlier and to higher levels in roots of the flood-tolerant genotype. Three potential flood-tolerance TFs which were differentially expressed between the two genotypes during the entire 10-day flooding duration were identified. This study confirmed the expression of anaerobic genes in response to soil flooding. Additionally, the differential expression of TFs associated with soil flooding tolerance was not qualitative but quantitative and temporal. Functional analyses of these genes will be necessary to reveal their potential to enhance flooding tolerance of soybean cultivars. PMID:25268626

Extraterrestrial materials processing

NASA Technical Reports Server (NTRS)

Steurer, W. H.

1982-01-01

The first year results of a multi-year study of processing extraterrestrial materials for use in space are summarized. Theoretically, there are potential major advantages to be derived from the use of such materials for future space endeavors. The types of known or postulated starting raw materials are described including silicate-rich mixed oxides on the Moon, some asteroids and Mars; free metals in some asteroids and in small quantities in the lunar soil; and probably volatiles like water and CO2 on Mars and some asteroids. Candidate processes for space materials are likely to be significantly different from their terrestrial counterparts largely because of: absence of atmosphere; lack of of readily available working fluids; low- or micro-gravity; no carbon-based fuels; readily available solar energy; and severe constraints on manned intervention. The extraction of metals and oxygen from lunar material by magma electrolysis or by vapor/ion phase separation appears practical.

Self-organizing biochemical cycle in dynamic feedback with soil structure

NASA Astrophysics Data System (ADS)

Vasilyeva, Nadezda; Vladimirov, Artem; Smirnov, Alexander; Matveev, Sergey; Tyrtyshnikov, Evgeniy; Yudina, Anna; Milanovskiy, Evgeniy; Shein, Evgeniy

2016-04-01

In the present study we perform bifurcation analysis of a physically-based mathematical model of self-organized structures in soil (Vasilyeva et al., 2015). The state variables in this model included microbial biomass, two organic matter types, oxygen, carbon dioxide, water content and capillary pore size. According to our previous experimental studies, organic matter affinity to water is an important property affecting soil structure. Therefore, organic matter wettability was taken as principle distinction between organic matter types in this model. It considers general known biological feedbacks with soil physical properties formulated as a system of parabolic type non-linear partial differential equations with elements of discrete modeling for water and pore formation. The model shows complex behavior, involving emergence of temporal and spatial irregular auto-oscillations from initially homogeneous distributions. The energy of external impact on a system was defined by a constant oxygen level on the boundary. Non-linear as opposed to linear oxygen diffusion gives possibility of modeling anaerobic micro-zones formation (organic matter conservation mechanism). For the current study we also introduced population competition of three different types of microorganisms according to their mobility/feeding (diffusive, moving and fungal growth). The strongly non-linear system was solved and parameterized by time-optimized algorithm combining explicit and implicit (matrix form of Thomas algorithm) methods considering the time for execution of the evaluated time-step according to accuracy control. The integral flux of the CO2 state variable was used as a macroscopic parameter to describe system as a whole and validation was carried out on temperature series of moisture dependence for soil heterotrophic respiration data. Thus, soil heterotrophic respiration can be naturally modeled as an integral result of complex dynamics on microscale, arising from biological processes formulated as a sum of state variables products, with no need to introduce any saturation functions, such as Mikhaelis-Menten type kinetics, inside the model. Analyzed dynamic soil model is being further developed to describe soil structure formation and its effect on organic matter decomposition at macro-scale, to predict changes with external perturbations. To link micro- and macro-scales we additionally model soil particles aggregation process. The results from local biochemical soil organic matter cycle serve as inputs to aggregation process, while the output aggregate size distributions define physical properties in the soil profile, these in turn serve as dynamic parameters in local biochemical cycles. The additional formulation is a system of non-linear ordinary differential equations, including Smoluchowski-type equations for aggregation and reaction kinetics equations for coagulation/adsorption/adhesion processes. Vasilyeva N.A., Ingtem J.G., Silaev D.A. Nonlinear dynamical model of microbial growth in soil medium. Computational Mathematics and Modeling, vol. 49, p.31-44, 2015 (in Russian). English version is expected in corresponding vol.27, issue 2, 2016.

Effects of silicon (Si) on arsenic (As) accumulation and speciation in rice (Oryza sativa L.) genotypes with different radial oxygen loss (ROL).

PubMed

Wu, Chuan; Zou, Qi; Xue, Shengguo; Mo, Jingyu; Pan, Weisong; Lou, Laiqing; Wong, Ming Hung

2015-11-01

Arsenic (As) contamination of paddy soils has adversely affected the health of millions of people those consuming rice for staple food. The present study was aimed at investigating the effects of silicon (Si) fertilization on As uptake, speciation in rice plants with different radial oxygen loss (ROL). Six genotypes were planted in pot soils under greenhouse conditions until late tillering state. The results showed that the rates of ROL were higher in hybrid rice genotypes varying from 19.76 to 27 μmol O2 g(-1) root dry weight h(-1) than that in conventional indica rice genotypes varying from 9.55 to 15.41 μmol O2 g(-1) root dry weight h(-1). Si addition significantly increased straw biomass (p<0.005), but with no significant effects on root biomass. Si fertilization significantly reduced shoot and root total As concentrations (p<0.001) in six genotypes grown in 40 mg As/kg soil. Si addition decreased the inorganic As in shoots of 'Xiangfengyou-9' with lower ROL and 'Xiangwanxian-12' with higher ROL by 31% and 25% respectively and had the tendency to increase DMA concentrations. It is potential to reduce As contamination of rice efficiently by combining Si fertilization and selecting genotypes with high radial oxygen loss. Copyright © 2015 Elsevier Ltd. All rights reserved.

Uranium Isotope Ratios in Modern and Precambrian Soils

NASA Astrophysics Data System (ADS)

DeCorte, B.; Planavsky, N.; Wang, X.; Auerbach, D. J.; Knudsen, A. C.

2015-12-01

Uranium isotopes (δ238U values) are an emerging paleoredox proxy that can help to better understand the redox evolution of Earth's surface environment. Recently, uranium isotopes have been used to reconstruct ocean and atmospheric redox conditions (Montoya-Pino et al., 2010; Brennecka et al., 2011; Kendall et al., 2013; Dahl et al., 2014). However, to date, there have not been studies on paleosols, despite that paleosols are, arguably better suited to directly tracking the redox conditions of the atmosphere. Sedimentary δ238U variability requires the formation of the soluble, oxidized form of U, U(VI). The formation of U(VI) is generally thought to require oxygen levels orders of magnitude higher than prebiotic levels. Without significant U mobility, it would have been impossible to develop isotopically distinct pools of uranium in ancient Earth environments. Conversely, an active U redox cycle leads to significant variability in δ238U values. Here we present a temporally and geographically expansive uranium isotope record from paleosols and modern soils to better constrain atmospheric oxygen levels during the Precambrian. Preliminary U isotope measurements of paleosols are unfractionated (relative to igneous rocks), possibly because of limited fractionation during oxidation (e.g., {Wang, 2015 #478}) or insufficient atmospheric oxygen levels to oxidize U(IV)-bearing minerals in the bedrock. Further U isotope measurements of paleosols with comparison to modern soils will resolve this issue.

Effect of soil fortified by polyurethane foam on septic tank effluent treatment.

PubMed

Nie, J Y; Zhu, N W; Lin, K M; Song, F Y

2011-01-01

Fortified soil was made up of a mixture at a mass ratio 4/1000-6/1000 of sponge and natural soil according to the results of column experiment. The fortified soil had bigger porosity and higher hydraulic conductivity than the natural soil. The columns packed with 900 mm of the fortified soil endured a flow rate equivalent to 100 L/m(2)/d of septic tank effluent and the average chemical oxygen demand, nitrogen, and phosphorus removal rates were around 92%, 75% and 96%, respectively. After 100 weeks of operation, the saturated hydraulic conductivity of the fortified soil kept higher than 0.2 m/d. The bigger porosity of sponge improved the effective porosity, and the bigger specific surface area of sponge acted as an ideal support for biomat growth and ensured the sewage treatment performance of the fortified soil. The comparable performance was due to a similar and sufficient degree of soil clogging genesis coupled with bioprocesses that effectively purified the septic tank effluent given the adequate retention times.

Enhancing Nitrogen Availability, Ammonium Adsorption-Desorption, and Soil pH Buffering Capacity using Composted Paddy Husk

NASA Astrophysics Data System (ADS)

Latifah, O.; Ahmed, O. H.; Abdul Majid, N. M.

2017-12-01

Form of nitrogen present in soils is one of the factors that affect nitrogen loss. Nitrate is mobile in soils because it does not absorb on soil colloids, thus, causing it to be leached by rainfall to deeper soil layers or into the ground water. On the other hand, temporary retention and timely release of ammonium in soils regulate nitrogen availability for crops. In this study, composted paddy husk was used in studies of soil leaching, buffering capacity, and ammonium adsorption and desorption to determine the: (i) availability of exchangeable ammonium, available nitrate, and total nitrogen in an acid soil after leaching the soil for 30 days, (ii) soil buffering capacity, and (iii) ability of the composted paddy husk to adsorb and desorb ammonium from urea. Leaching of ammonium and nitrate were lower in all treatments with urea and composted paddy husk compared with urea alone. Higher retention of soil exchangeable ammonium, available nitrate, and total nitrogen of the soils with composted paddy husk were due to the high buffering capacity and cation exchange capacity of the amendment to adsorb ammonium thus, improving nitrogen availability through temporary retention on the exchange sites of the humic acids of the composted paddy husk. Nitrogen availability can be enhanced if urea is amended with composted paddy husk.

Design of a lunar oxygen production plant

NASA Technical Reports Server (NTRS)

Radhakrishnan, Ramalingam

1990-01-01

To achieve permanent human presence and activity on the moon, oxygen is required for both life support and propulsion. Lunar oxygen production using resources existing on the moon will reduce or eliminate the need to transport liquid oxygen from earth. In addition, the co-products of oxygen production will provide metals, structural ceramics, and other volatile compounds. This will enable development of even greater self-sufficiency as the lunar outpost evolves. Ilmenite is the most abundant metal-oxide mineral in the lunar regolith. A process involving the reaction of ilmenite with hydrogen at 1000 C to produce water, followed by the electrolysis of this water to provide oxygen and recycle the hydrogen has been explored. The objective of this 1990 Summer Faculty Project was to design a lunar oxygen-production plant to provide 5 metric tons of liquid oxygen per year from lunar soil. The results of this study describe the size and mass of the equipment, the power needs, feedstock quantity and the engineering details of the plant.

Dynamics of soil available phosphorus and its impact factors under simulated climate change in typical farmland of Taihu Lake region, China.

PubMed

Yu, Kaihao; Chen, Xiaomin; Pan, Genxing; Zhang, Xuhui; Chen, Can

2016-02-01

Global climate change affects the availability of soil nutrients, thereby influencing crop productivity. This research was conducted to investigate the effects of elevated CO2, elevated temperature, and the interaction of the elevated CO2 and temperature on the soil available phosphorus (P) of a paddy-wheat rotation in the Taihu Lake region, China. Winter wheat (Triticum aestivum L.) was cultivated during the study period from 2011 to 2014 at two CO2 levels (350 μL•L(-1) ambient and 500 μL•L(-1) elevated by 150 μL•L(-1)) and two temperatures (ambient and 2 °C above the ambient). Soil available P content increased at the first season and decreased at the last season during the three wheat growing seasons. Soil available P content showed seasonal variation, whereas dynamic changes were not significant within each growing season. Soil available P content had no obvious trends under different treatments. But for the elevated temperature, CO2, and their combination treatments, soil available P content decreased in a long time period. During the period of wheat ripening stage, significant positive correlations were found between soil available P content and saturated hydraulic conductivity (Ks) and organic matter, but significant negative correlations with soil clay content and pH value; the correlation coefficients were 0.9400 (p < 0.01), 0.9942 (p < 0.01), -0.9383 (p < 0.01), and -0.6403 (p < 0.05), respectively. Therefore, Ks, organic matter, soil clay, and pH were the major impact factors on soil available P content. These results can provide a basis for predicting the trend of soil available P variation, as well as guidance for managing the soil nutrients and best fertilization practices in the future climate change scenario.

Estimation of oxygen isotope in source water of tree-ring cellulose in Indonesia using tree-ring oxygen isotope model

NASA Astrophysics Data System (ADS)

Hisamochi, R.; Watanabe, Y.; Kurita, N.; Sano, M.; Nakatsuka, T.; Matsuo, M.; Yamamoto, H.; Sugiyama, J.; Tsuda, T.; Tagami, T.

2016-12-01

Oxygen isotope composition (δ18O) of tree-ring cellulose has been used as paleoclimate proxy because its origin is atmospheric precipitation. However, interpretation of tree-ring cellulose δ18O is not simple because source water of tree-ring cellulose (the water took up by tree) is not atmospheric precipitation but soil water or ground water in growing season, precisely. In this study, we investigate the relationship between source water of tree-ring cellulose and precipitation in order to improve interpretation of tree-ring cellulose δ18O as paleoclimate proxy. We collected ten teak (Tectona grandis) plantation samples in Java Island, Indonesia. Teak is deciduous tree and grows in rainy season. Samples were cut into annual rings after cellulose extraction. δ18O of individual rings were measured by TCEA-IRMS at the Research Institute of Humanity and Nature. We calculatedδ18O of source water by means of tree-ring oxygen isotope model and then comparedδ18O of source water and that of monthly atmospheric precipitation at Jakarta (GNIP; Global Network of isotopes in Precipitation). Source waterδ18O shows two types of significant correlation withδ18O in atmospheric precipitation. One is positive correlation withδ18O of atmospheric precipitation in previous rainy season. Another is negative correlation with δ18O of atmospheric precipitation in beginning of the growing season. The former indicates that soil water in growing season contains rainfall in previous rainy season and teak mainly takes it up. The latter is difficult to interpret. It may be related to soil moisutre in beginning of growing season.

Co-digestion of agricultural and municipal waste to produce energy and soil amendment.

PubMed

Macias-Corral, Maritza A; Samani, Zohrab A; Hanson, Adrian T; Funk, Paul A

2017-09-01

In agriculture, manure and cotton gin waste are major environmental liabilities. Likewise, grass is an important organic component of municipal waste. These wastes were combined and used as substrates in a two-phase, pilot-scale anaerobic digester to evaluate the potential for biogas (methane) production, waste minimisation, and the digestate value as soil amendment. The anaerobic digestion process did not show signs of inhibition. Biogas production increased during the first 2 weeks of operation, when chemical oxygen demand and volatile fatty acid concentrations and the organic loading rate to the system were high. Chemical oxygen demand from the anaerobic columns remained relatively steady after the first week of operation, even at high organic loading rates. The experiment lasted about 1 month and produced 96.5 m 3 of biogas (68 m 3 of CH 4 ) per tonne of waste. In terms of chemical oxygen demand to methane conversion efficiency, the system generated 62% of the theoretical methane production; the chemical oxygen demand/volatile solids degradation rate was 62%, compared with the theoretical 66%. The results showed that co-digestion and subsequent digestate composting resulted in about 60% and 75% mass and volume reductions, respectively. Digestate analysis showed that it can be used as a high nutrient content soil amendment. The digestate met Class A faecal coliform standards (highest quality) established in the United States for biosolids. Digestion and subsequent composting concentrated the digestate nitrogen, phosphorus, and potassium content by 37%, 24%, and 317%, respectively. Multi-substrate co-digestion is a practical alternative for agricultural waste management, minimisation of landfill disposal, and it also results in the production of valuable products.

Effects of Air Drying on Soil Available Phosphorus in Two Grassland Soils

NASA Astrophysics Data System (ADS)

Schaerer, M.; Frossard, E.; Sinaj, S.

2003-04-01

Mobilization of P from the soil to ground and surface water is principally determined by the amount of P in the soil and physico-chemical as well as biological processes determining the available P-pool that is in equilibrium with soil solution. Soil available P is commonly estimated on air dry soil using a variety of methods (extraction with water, dilute acids and bases, anion exchange resin, isotopic exchange or infinite sinks). Recently, attempts have been made to use these measurements to define the potential for transport of P from soil to water by overland flow or subsurface flow. The effect of air drying on soil properties in general, and plant nutrient status in particular, have been subject of a number of studies. The main objective of this paper was to evaluate the effect of air-drying on soil properties and available P. For this experiment, grassland soils were sampled on two study sites located on slopes in the watershed of Lake Greifensee, 25 km south-east of Zurich. Both soils (0-4 cm depth) are rich in P with 1.7 and 1.3 g kg-1 total P at site I and site II, respectively. The concentrations on isotopically exchangeable P within 1 minute (E1min, readily available P) for the same depth were also very high, 58 and 27 mg P kg soil-1 for the site I and II, respectively. In the present study both field moist and air dried soil samples were analyzed for microbial P (Pmic), resin extractable P (P_r), isotopically exchangeable P (E1min) and amorphous Al and Fe (Alox, Feox). Generally, the microbial P in field moist soils reached values up to 120 mg P/kg soil, whereas after drying they decreased by 73% in average for both soils. On the contrary to Pmic, available P estimated by different methods strongly increased after drying of the soil samples. The concentration of phosphate ions in the soil solution c_p, E1min and P_r were 4.2, 2.2 and 2 times higher in dry soils than in field moist soils. The increase in available P shows significant semilogarithmic correlations with the decrease in microbial P (r^2 = 0.66, r^2 = 0.53 and r^2 = 0.75 respectively for c_p, E(1 min) and resin P). The parameter R_0/r1min from the isotopic exchange approach, which is well correlated with the soil P fixing capacity, generally decreased after drying. Drying of the soil significantly modifies soil properties that control P availability, such as amorphous Fe- and Al-oxides. The amount of Feox and Alox was decreased by 3 and 6% respectively. It can be concluded that drying of the soils leads a strong increase in available P as estimated by different methods. The observed available P increase is mainly related to a modification of both soil chemistry and biology. Especially for grassland soils with a high organic matter content and microbial biomass, available P measurements on dry soil seem to overestimate the available P mainly due to a release of microbial P.

Persistent high temperature and low precipitation reduce peat carbon accumulation.

PubMed

Bragazza, Luca; Buttler, Alexandre; Robroek, Bjorn J M; Albrecht, Remy; Zaccone, Claudio; Jassey, Vincent E J; Signarbieux, Constant

2016-12-01

Extreme climate events are predicted to become more frequent and intense. Their ecological impacts, particularly on carbon cycling, can differ in relation to ecosystem sensitivity. Peatlands, being characterized by peat accumulation under waterlogged conditions, can be particularly sensitive to climate extremes if the climate event increases soil oxygenation. However, a mechanistic understanding of peatland responses to persistent climate extremes is still lacking, particularly in terms of aboveground-belowground feedback. Here, we present the results of a transplantation experiment of peat mesocosms from high to low altitude in order to simulate, during 3 years, a mean annual temperature c. 5 °C higher and a mean annual precipitation c. 60% lower. Specifically, we aim at understanding the intensity of changes for a set of biogeochemical processes and their feedback on carbon accumulation. In the transplanted mesocosms, plant productivity showed a species-specific response depending on plant growth forms, with a significant decrease (c. 60%) in peat moss productivity. Soil respiration almost doubled and Q 10 halved in the transplanted mesocosms in combination with an increase in activity of soil enzymes. Spectroscopic characterization of peat chemistry in the transplanted mesocosms confirmed the deepening of soil oxygenation which, in turn, stimulated microbial decomposition. After 3 years, soil carbon stock increased only in the control mesocosms whereas a reduction in mean annual carbon accumulation of c. 30% was observed in the transplanted mesocosms. Based on the above information, a structural equation model was built to provide a mechanistic understanding of the causal connections between peat moisture, vegetation response, soil respiration and carbon accumulation. This study identifies, in the feedback between plant and microbial responses, the primary pathways explaining the reduction in carbon accumulation in response to recurring climate extremes in peat soils. © 2016 John Wiley & Sons Ltd.

[Effects of combined application of biochar and inorganic fertilizers on the available phosphorus content of upland red soil].

PubMed

Jing, Yan; Chen, Xiao-min; Liu, Zu-xiang; Huang, Qian-ru; LiI, Qiu-xia; Chen, Chen; Lu, Shao-shan

2013-04-01

Aiming at the low content of available phosphorus in upland red soil of Southern China, this paper studied the effects of combined application of biochar and inorganic fertilizers on the available phosphorus and organic carbon contents and the pH of this soil. With the combined application of biochar and inorganic fertilizers, the soil physical and chemical properties improved to different degrees. As compared with the control, the soil pH and the soil organic carbon and available phosphorus contents at different growth stages of oil rape after the combined application of biochar and inorganic fertilizers all had an improvement, with the increments at bolting stage, flowering stage, and ripening stage being 16%, 24% and 26%, 23%, 34% and 38%, and 100%, 191% and 317% , respectively. The soil pH and the soil organic carbon and available phosphorus contents were increased with the increasing amount of applied biochar. Under-the application of biochar, the soil available phosphorus had a significant correlation with the soil pH and soil organic carbon content. This study could provide scientific basis to improve the phosphorus deficiency and the physical and chemical properties of upland red soil.

Oxygen and iron production by electrolytic smelting of lunar soil

NASA Technical Reports Server (NTRS)

Haskin, Larry A.

1989-01-01

Previous work has shown that Fe(sup 0) and O2 can be derived by electrolysis from silicate smelt of a composition typical of lunar soils (Lindstrom and Haskin 1979). In the present study, the goal is to refine further the conditions necessary to optimize production and to determine efficiencies of production (how much product is derived for a given current) and purity of products. These depend on several factors, including potential imposed between electrodes, configuration and surface area of the electrodes, composition of the electrolyzed silicate melt, and oxygen fugacity. Experiments were designed to measure the dependence on these variables of three parameters that must be known before production by electrolysis can be optimized. These parameters are: Limiting Current; Actual Current; and Efficiencies of Production.

Microbial community dynamics and methane, carbon dioxide, oxygen, and nitrous oxide concentrations in upland forest and riparian soils across a seasonal gradient of fully saturated soils to completely dried soils

NASA Astrophysics Data System (ADS)

Jones, R. T.; McGlynn, B. L.; McDermott, T.; Dore, J. E.

2015-12-01

Gas concentrations (CH4, CO2, N2O, and O2), soil properties (soil water content and pH), and microbial community composition were measured from soils at 32 sites across the Stringer Creek Watershed in the Tenderfoot Creek Experimental Forest 7 times between June 3, 2013 and September 20, 2013. Soils were fully saturated during the initial sampling period and dried down over the course of the summer. Soils and gas were sampled from 5cm and 20cm at each site and also at 50cm at eight riparian sites. In total, 496 individual soil samples were collected. Soil moisture ranged from 3.7% to fully saturated; soil pH ranged from 3.60 to 6.68. Methane concentrations in soils ranged from 0.426 ppm to 218 ppm; Carbon dioxide concentrations ranged from 550 ppm to 42,990 ppm; Nitrous oxide concentrations ranged from 0.220 ppm to 2.111 ppm; Oxygen concentrations ranged from 10.2% to 21.5%. Soil microbial communities were characterized by DNA sequences covering the V4 region of the 16S rRNA gene. DNA sequences were generated (~30,000,000 sequences) from the 496 soil samples using the Illumina MiSeq platform. Operational Taxonomic Units were generated using USEARCH, and representative sequences were taxonomically classified according the Ribosomal Database Project's taxonomy scheme. Analysis of similarity revealed that microbial communities found within a landscape type (high upland forest, low upland forest, riparian) were more similar than among landscape types (R = 0.600; p<0.001). Similarly, communities from unique site x depths were similar across the 7 collection periods (R = 0.646; p<0.001) despite changes in soil moisture. Euclidean distances of soil properties and gas concentrations were compared to Bray-Curtis community dissimilarity matrices using Mantel tests to determine how community structure co-varies with the soil environment and gas concentrations. All variables measured significantly co-varied with microbial community membership (pH: R = 0.712, p < 0.001; CO2: R = 0.578, p < 0.001; O2: R = 0.517, p < 0.001; Soil moisture: R = 0.408, p < 0.001; N2O: R = 0.218, p = 0.003; CH4: R = 0.195, p = 0.008). Despite the rather low co-variation between methane concentrations and microbial community composition, relative abundances of methanotrophic and methanogenic lineages did co-vary strongly with methane concentrations.

Modelling the effect of soil moisture and organic matter degradation on biogenic NO emissions from soils in Sahel rangeland (Mali)

NASA Astrophysics Data System (ADS)

Delon, C.; Mougin, E.; Serça, D.; Grippa, M.; Hiernaux, P.; Diawara, M.; Galy-Lacaux, C.; Kergoat, L.

2014-08-01

This work is an attempt to provide seasonal variation of biogenic NO emission fluxes in a sahelian rangeland in Mali (Agoufou, 15.34° N, 1.48° W) for years 2004, 2005, 2006, 2007 and 2008. Indeed, NO is one of the most important precursor for tropospheric ozone, and the contribution of the Sahel region in emitting NO is no more considered as negligible. The link between NO production in the soil and NO release to the atmosphere is investigated in this study, by taking into account vegetation litter production and degradation, microbial processes in the soil, emission fluxes, and environmental variables influencing these processes, using a coupled vegetation-litter decomposition-emission model. This model includes the Sahelian-Transpiration-Evaporation-Productivity (STEP) model for the simulation of herbaceous, tree leaf and fecal masses, the GENDEC model (GENeral DEComposition) for the simulation of the buried litter decomposition, and the NO emission model for the simulation of the NO flux to the atmosphere. Physical parameters (soil moisture and temperature, wind speed, sand percentage) which affect substrate diffusion and oxygen supply in the soil and influence the microbial activity, and biogeochemical parameters (pH and fertilization rate related to N content) are necessary to simulate the NO flux. The reliability of the simulated parameters is checked, in order to assess the robustness of the simulated NO flux. Simulated yearly average of NO flux ranges from 0.69 to 1.09 kg(N) ha-1 yr-1, and wet season average ranges from 1.16 to 2.08 kg(N) ha-1 yr-1. These results are in the same order as previous measurements made in several sites where the vegetation and the soil are comparable to the ones in Agoufou. This coupled vegetation-litter decomposition-emission model could be generalized at the scale of the Sahel region, and provide information where little data is available.

Modelling the effect of soil moisture and organic matter degradation on biogenic NO emissions from soils in Sahel rangeland (Mali)

NASA Astrophysics Data System (ADS)

Delon, C.; Mougin, E.; Serça, D.; Grippa, M.; Hiernaux, P.; Diawara, M.; Galy-Lacaux, C.; Kergoat, L.

2015-01-01

This work is an attempt to provide seasonal variation of biogenic NO emission fluxes in a sahelian rangeland in Mali (Agoufou, 15.34° N, 1.48° W) for years 2004-2008. Indeed, NO is one of the most important precursor for tropospheric ozone, and the contribution of the Sahel region in emitting NO is no more considered as negligible. The link between NO production in the soil and NO release to the atmosphere is investigated in this study, by taking into account vegetation litter production and degradation, microbial processes in the soil, emission fluxes, and environmental variables influencing these processes, using a coupled vegetation-litter decomposition-emission model. This model includes the Sahelian-Transpiration-Evaporation-Productivity (STEP) model for the simulation of herbaceous, tree leaf and fecal masses, the GENDEC model (GENeral DEComposition) for the simulation of the buried litter decomposition and microbial dynamics, and the NO emission model (NOFlux) for the simulation of the NO release to the atmosphere. Physical parameters (soil moisture and temperature, wind speed, sand percentage) which affect substrate diffusion and oxygen supply in the soil and influence the microbial activity, and biogeochemical parameters (pH and fertilization rate related to N content) are necessary to simulate the NO flux. The reliability of the simulated parameters is checked, in order to assess the robustness of the simulated NO flux. Simulated yearly average of NO flux ranges from 0.66 to 0.96 kg(N) ha-1 yr-1, and wet season average ranges from 1.06 to 1.73 kg(N) ha-1 yr-1. These results are in the same order as previous measurements made in several sites where the vegetation and the soil are comparable to the ones in Agoufou. This coupled vegetation-litter decomposition-emission model could be generalized at the scale of the Sahel region, and provide information where little data is available.

Drought and soil amendment effects on monoterpene emission in rosemary plants.

PubMed

Nogués, I; Muzzini, V; Loreto, F; Bustamante, M A

2015-12-15

The aim of this work was to study the changes during 15days in the monoterpene emission rates of the Mediterranean shrub rosemary (Rosmarinus officinalis L.), in response to increasing drought stress and fertilisation using two different composts derived from livestock anaerobic digestates (cattle and pig slurry). Drought stress considerably reduced photosynthetic rates, stomatal conductance and isoprenoid emissions and also induced a change in blend composition. In the drought stressed rosemary plants, a positive relationship of non-oxygenated monoterpene emissions and a negative relationship of oxygenated monoterpene with photosynthesis were observed, indicating a different control mechanism over the emissions of the two types of isoprenoids. The emission of non-oxygenated monoterpenes seemed to depend more on photosynthesis and "de novo" synthesis, whereas emission of oxygenate monoterpenes was more dependent on volatilisation from storage, mainly driven by cumulative temperatures. In the short term, the addition of composted organic materials to the soil did not induce a significant effect on isoprenoid emission rates in the rosemary plants. However, the effect of the interaction between fertilisation and seasonality on isoprenoid emission rates was influenced by the amendment origin. Also, we emphasized changes in potential isoprenoid emission factors throughout the experiment, probably indicating changes in the leaf developmental stage. Copyright © 2015. Published by Elsevier B.V.

[Relationships between soil nutrients and rhizospheric soil microbial communities and enzyme activities in a maize-capsicum intercropping system].

PubMed

Xu, Qiang; Cheng, Zhi-Hui; Meng, Huan-Wen; Zhang, Yu

2007-12-01

By using plastic sheet and nylon mesh to partition the root systems of maize and capsicum in a maize-capsicum intercropping system, this paper studied the relationships between soil biological factors and nutritive status in the intercropping system, with no partitioning and maize monoculture and capsicum monoculture as the control. The results showed that intercropping maize and capsicum had its high superiority. In the treatments of no partitioning and nylon mesh portioning in the intercropping system, soil enzyme activities, microbial individuals and nutrient contents were significantly higher, compared with those in the treatments of nylon mesh partitioning and monocultures. All kinds of soil available nutrients showed significant or very significant positive correlations with soil biological factors, except that soil available Mg was negatively correlated with soil fungi and catalase activity. Pathway analysis indicated that in the intercropping system, soil urease, catalase, protease, and bacteria were the main factors affecting the accumulation of soil organic matter, saccharase was the most important factor affecting soil alkali-hydrolyzable N, urease was the most important factor affecting soil available P, and bacteria largely determined soil available K. Soil alkaline phosphatase and fungi selectively affected the accumulation of soil organic matter and available N, P and K. There was a slight negative correlation between soil actinomycetes and soil nutrients, suggesting that actinomycetes had little effect on soil nutrient formation.

Effects of N-ammonoxidized lignins amendment on N availability and soil fertility: An incubation study

NASA Astrophysics Data System (ADS)

María De la Rosa, José; López-Martín, María; Liebner, Falk; Knicker, Heike

2013-04-01

The shift towards a biobased economy will probably generate the application of bioenergy by-products and charred residues to the soil as either amendments or fertilizers. The process of ammonoxidation (application of gaseous oxygen and aqueous ammonia under ambient pressure breaks down aromatic lignin moieties and introduces N in the form of urea, amides and amines), converts lignin, a major by-product of the pulp and paper industry, or other ligneous materials into artificial humic matter (N-lignin). The use of N-ammonoxidized lignin as soil improvers is in theory an economically viable solution, especially interesting for agricultural areas of Mediterranean countries, in which additional factors such as water shortage and fires contribute to declining N availability by lowering nutrient diffusion, litter input or sequestration of N in charred structures. However, limited research has been done to determine how this will influence C and N dynamics and soil fertility. Therefore we performed pot experiments in which a perennial ryegrass (Lolium perenne L.) was grown on a typical Andalusian soil (chromic Luvisol) after amendment of N-lignins highly enriched in 15N (Sarkanda and Indulin ammonoxidized lignins) for 75 days. For comparison, the incubation was also carried out on soils fertilized with 15NO3 and unfertilized (control). The application of ammonoxidized lignins altered the pH and electrical conductivity of the soil. At higher concentrations a retardation of seed germination was evidenced, an observation that needs further considerations before N-enriched technical lignins can be applied in agriculture. After 75 days, the plant shoots from the pots amended with15N-Indulin and 15N-Sarkanda accumulated 8% and 20%, respectively of the initial 15N (15N0). The N was efficiently sequestered from fast release or leaching and most of 15N0 remained in the soil (64%) in the 15N-Indulin pots. In contrast, the 15N-Sarkanda pots showed a lower efficiency in the N retention. The N-sequestration potential of ammonoxidized lignins seems to be mainly due to a quick N transfer into newly formed microbial biomass. However, the efficiency of this transfer depends on the kind of used N-lignin. The notable increase in the 15N of the grass production (> 20%) evidences a more efficient use of N derived from the soil amendment of the Indulin pots. Solid-state NMR spectroscopy revealed that the N of the added N-lignins was quickly transformed into peptide-type N, most tentatively of microbial origin, without major alteration of the lignin backbone. This indicates that in soils the competition for nutrients favors N immobilization into biomass and its subsequent sequestration within recalcitrant biopolymers rather than its stabilization by covalent binding to lignins.

Structure and function of Frankia vesicles in denitrogen fixation by actinorhizal plants: Annual technical progress report for period January 1, 1987-November 15, 1987

DOE Office of Scientific and Technical Information (OSTI.GOV)

Torrey, J.G.

1987-11-20

Frankia is a filamentous soil bacterium of the Actinomycetales that is capable of fixation of atmospheric dinitrogen both in the free-living state and within root modules of a number of woody dicotyledonous plants in a symbiotic process. The bacterium is of special interest because of its genetic capacity to differentiate terminal swellings of the hyphal filaments called vesicles. Vesicles form in the free-living organism when deprived of combined nitrogen substrates under aerobic conditions. A multilaminate envelope surrounds the vesicle providing a barrier to direct exposure of the oxygen-labile nitrogenase enzyme that forms within the vesicle. In root nodules, vesicles maymore » or may not form, depending upon the structural configuration of the host plant cells, the ambient oxygen concentration surrounding the root nodule and the expression of host-microbial interactions under the control of the two genomes. Under varying stresses of nutrient availability and the changing gaseous environment, remarkable adaptations may occur in either or both partners of the symbiosis to optimize dinitrogen fixation. 9 refs.« less

Impacts of Steel-Slag-Based Silicate Fertilizer on Soil Acidity and Silicon Availability and Metals-Immobilization in a Paddy Soil

PubMed Central

Ning, Dongfeng; Liang, Yongchao; Liu, Zhandong; Xiao, Junfu; Duan, Aiwang

2016-01-01

Slag-based silicate fertilizer has been widely used to improve soil silicon- availability and crop productivity. A consecutive early rice-late rice rotation experiment was conducted to test the impacts of steel slag on soil pH, silicon availability, rice growth and metals-immobilization in paddy soil. Our results show that application of slag at a rate above higher or equal to 1 600 mg plant-available SiO2 per kg soil increased soil pH, dry weight of rice straw and grain, plant-available Si concentration and Si concentration in rice shoots compared with the control treatment. No significant accumulation of total cadmium (Cd) and lead (Pb) was noted in soil; rather, the exchangeable fraction of Cd significantly decreased. The cadmium concentrations in rice grains decreased significantly compared with the control treatment. In conclusion, application of steel slag reduced soil acidity, increased plant–availability of silicon, promoted rice growth and inhibited Cd transport to rice grain in the soil-plant system. PMID:27973585

Linking water and carbon fluxes in a Mediterranean oak woodland using a combined flux and ?18O partitioning approach

NASA Astrophysics Data System (ADS)

Dubbert, M.; Piayda, A.; Costa e Silva, F.; Correia, A.; Pereira, J. S.; Cuntz, M.; Werner, C.

2013-12-01

Water is one of the key factors driving ecosystem productivity, especially in water-limited ecosystems, where global climate change is expected to intensify drought and alter precipitation patterns. One such ecosystem is the ';Montado', where two vegetation layers respond differently to drought: oak trees avoid drought due to their access to deeper soil layers and ground water while herbaceous plants, surviving the summer in the form of seeds. We aimed at 1) quantifying the impact of the understory herbaceous vegetation on ecosystem carbon and water fluxes throughout the year, 2) determining the driving environmental factors for evapotranspiration (ET) and net ecosystem exchange (NEE) and 3) disentangling how ET components of the ecosystem relate to carbon dioxide exchange. We present one year data set comparing modeled and measured stable oxygen isotope signatures (δ18O) of soil evaporation, confirming that the Craig and Gordon equation leads to good agreement with measured δ18O of evaporation (Dubbert et al. 2013). Partitioning ecosystem ET and NEE into its three sources revealed a strong contribution of soil evaporation (E) and herbaceous transpiration (T) to ecosystem ET during spring and fall. In contrast, soil respiration (R) and herbaceous net carbon gain contributed to a lesser amount to ecosystem NEE during spring and fall, leading to consistently smaller water use efficiencies (WUE) of the herbaceous understory compared to the cork-oaks. Here, we demonstrate that the ability to assess ET, NEE and WUE independent of soil evaporation dynamics enables the understanding of the mechanisms of the coupling between water and carbon fluxes and their responses to drought. Dubbert, M., Cuntz, M., Piayda, A., Maguas, C., Werner, C., 2013: Partitioning evapotranspiration - Testing the Craig and Gordon model with field measurements of oxygen isotope ratios of evaporative fluxes. J Hydrol. a) Oxygen isotope signatures of soil evaporation on bare soil plots calculated with the Craig and Gordon equation versus measured values for the open (white circles) and tree site (black circles) of every measurement point (mean values × SD; n=3; R2=0.8; p<0.001). b) Modeled δ18O of leaf water at the evaporating sites in the non steady state versus measured leaf water δ18Ofor the open and tree site (R2=0.9,p<0.001). Relative contribution (%) of soil, herbaceous vegetation and cork-oaks to ecosystem evapotranspiration and net ecosystem CO2 exchange

A review on slurry bioreactors for bioremediation of soils and sediments.

PubMed

Robles-González, Ireri V; Fava, Fabio; Poggi-Varaldo, Héctor M

2008-02-29

The aim of this work is to present a critical review on slurry bioreactors (SB) and their application to bioremediation of soils and sediments polluted with recalcitrant and toxic compounds. The scope of the review encompasses the following subjects: (i) process fundamentals of SB and analysis of advantages and disadvantages; (ii) the most recent applications of SB to laboratory scale and commercial scale soil bioremediation, with a focus on pesticides, explosives, polynuclear aromatic hydrocarbons, and chlorinated organic pollutants; (iii) trends on the use of surfactants to improve availability of contaminants and supplementation with degradable carbon sources to enhance cometabolism of pollutants; (iv) recent findings on the utilization of electron acceptors other than oxygen; (v) bioaugmentation and advances made on characterization of microbial communities of SB; (vi) developments on ecotoxicity assays aimed at evaluating bioremediation efficiency of the process.From this review it can be concluded that SB is an effective ad situ and ex situ technology that can be used for bioremediation of problematic sites, such as those characterized by soils with high contents of clay and organic matter, by pollutants that are recalcitrant, toxic, and display hysteretic behavior, or when bioremediation should be accomplished in short times under the pressure and monitoring of environmental agencies and regulators. SB technology allows for the convenient manipulation and control of several environmental parameters that could lead to enhanced and faster treatment of polluted soils: nutrient N, P and organic carbon source (biostimulation), inocula (bioaugmentation), increased availability of pollutants by use of surfactants or inducing biosurfactant production inside the SB, etc. An interesting emerging area is the use of SB with simultaneous electron acceptors, which has demonstrated its usefulness for the bioremediation of soils polluted with hydrocarbons and some organochlorinated compounds. Characterization studies of microbial communities of SB are still in the early stages, in spite of their significance for improving reactor operation and design optimization.We have identified the following niches of research needs for SB in the near and mid term future, inter alia: (i) application of SB with sequential and simultaneous electron acceptors to soils polluted with contaminants other than hydrocarbons (i.e., pesticides, explosives, etc.), (ii) evaluation of the technical feasibility of triphasic SB that use innocuous solvents to help desorbing pollutants strongly attached to soils, and in turn, to enhance their biodegradation, (iii) gaining deeper insight of microbial communities present in SB with the intensified application of molecular biology tools such as PCR-DGGE, PCR-TGGE, ARDRA, etc., (iv) development of more representative ecotoxicological assays to better assess the effectiveness of a given bioremediation process.

P losses in soil columns amended with compost and digestate from municipal solid wastes

NASA Astrophysics Data System (ADS)

García-Albacete, Marta; Cartagena, M. Carmen

2013-04-01

Sludge's, manures and compost applied to agricultural soils in high quantities and long-term application to increase crop productivity, result in accumulation of soil phosphorous (P). Soluble P is directly available to algae (Sonzogni et al., 1982) and thus particularly relevant to water quality degradation. Transport of P from agricultural soils to surface waters has been linked to eutrophication in fresh water and estuaries (Sharpley and Lemunyon, 1998). Almost 50% of stored water in Spain is degraded by eutrophication processes that cause the proliferation of algae and other organisms and a decrease in oxygen content (Environmental Profile of Spain 2005). Fertilizers and biodegradable wastes application rates in agriculture are based on nitrogen requirements. This results in a P supply that is in excess of crops needs since the ratio of P to N in waste use to be greater than required by plants (Smith, 1995). While surface runoff is an important pathway of phosphorus losses from agricultural lands, significant losses can also occur via leaching thought soils. Leaching tests are important for assessing the risk of release of potential pollutants from biodegradable wastes into groundwater or surface water. Percolation tests also get information about the interaction of organic waste with soils. The study was conducted according to the percolation leaching test CEN/TS 14405 "Characterization of waste-Leaching behavior test- Up-flow percolation test" with three different soils mixed with organic wastes from msw (compost and digestato) and an inorganic fertilizer (NaH2PO4). Each soil was amended with the P sources at rates of 100 kg P ha-1. Leachates were collected and analyzed for each column for dissolved reactive P by inductively coupled plasma atomic emission spectroscopy (ICP) following USEPA Method 3050A digestion (USEPA, 1995). The fact that P sorption capacity (Xmax, PSI) of the soils was determined using Langmuiŕs isotherms and the P forms from organic wastes were extensively characterized allows leaching data could be interpreted on the basis of P-sources chemical properties.

Use of Organic Substrates as a Best Management Practice for Active Ranges

DTIC Science & Technology

2011-11-30

is much more limited in high organic carbon soils due to a combination of enhanced sorption and degradation . Organic materials can enhance explosive... degradation by stimulating anaerobic biodegradation of the target contaminants and reducing naturally occurring Fe(III) to Fe(II), providing a reservoir...of reducing power to maintain anoxic conditions in the soil and enhance abiotic degradation . Humic materials slowly biodegrade, consuming oxygen

[Iron from soil to plant products].

PubMed

Briat, Jean-François

2005-11-01

As an essential mineral, iron plays an important role in fundamental biological processes such as photosynthesis, respiration, nitrogen fixation and assimilation, and DNA synthesis. Iron is also a co-factor of many enzymes involved in the synthesis of plant hormones. The latter are involved in many pathways controling plant development or adaptative responses to environmental conditions. Iron reactivity with oxygen leads to its insolubility (responsible for deficiency) and potential toxicity, and complicates iron use by aerobic organisms. If plants lacked an active root system with which to acquire iron from the soil, most would experience iron deficiency and show physiological changes. In contrast, an excess of soluble iron, which can occur in flooded acidic soils, can lead to ferrous iron toxicity due to iron reactivity with reduced forms of oxygen and subsequent free radical production. An optimal iron concentration is thus required for a plant to grow and develop normally. This concentration depends on multiple regulatory mechanisms controlling iron uptake from soil by the roots, as well as iron transport and distribution to the various plant organs. Optimized seed iron content is a major biotechnological challenge identified by the World Health Organization, and it is therefore crucial to understand the underlying mechanisms. Iron delivery to seeds is tightly controlled, and depends on the nature of iron speciation in specific chelates, and their transport.

Pesticides Curbing Soil Fertility: Effect of Complexation of Free Metal Ions.

PubMed

Kaur, Sukhmanpreet; Kumar, Vijay; Chawla, Mohit; Cavallo, Luigi; Poater, Albert; Upadhyay, Niraj

2017-01-01

Researchers have suggested that the reason behind infertility is pernicious effect of broad spectrum pesticides on non target, beneficial microorganism of soil. Here, studying the chelating effect of selective organophosphate and carbamate pesticides with essential metal ions, at all possible combinations of three different pH (4 ± 0.05, 7 ± 0.05 and 9 ± 0.05) and three different temperatures (15 ± 0.5°C, 30 ± 0.5°C and 45 ± 0.5°C), shows very fast rate of reaction which further increases with increase of pH and temperature. Carbonyl oxygen of carbamate and phosphate oxygen of organophosphate were found to be common ligating sites among all the complexes. Formed metal complexes were found to be highly stable and water insoluble on interaction with essential metal ions in solvent medium as well as over silica. Density functional theory (DFT) calculations not only reinforced the experimental observations, but, after a wide computational conformational analysis, unraveled the nature of the high stable undesired species that consist of pesticides complexed by metal ions from the soil. All in all, apart from the direct toxicity of pesticides, the indirect effect by means of complexation of free metal ions impoverishes the soil.

Pesticides Curbing Soil Fertility: Effect of Complexation of Free Metal Ions

NASA Astrophysics Data System (ADS)

Kaur, Sukhmanpreet; Kumar, Vijay; Chawla, Mohit; Cavallo, Luigi; Poater, Albert; Upadhyay, Niraj

2017-07-01

Researchers have suggested that the reason behind infertility is pernicious effect of broad spectrum pesticides on non target, beneficial microorganism of soil. Here, studying the chelating effect of selective organophosphate and carbamate pesticides with essential metal ions, at all possible combinations of three different pH (4±0.05, 7±0.05 and 9±0.05) and three different temperatures (15±0.5°C, 30±0.5°C and 45±0.5°C), shows very fast rate of reaction which further increases with increase of pH and temperature. Carbonyl oxygen of carbamate and phosphate oxygen of organophosphate were found to be common ligating sites among all the complexes. Formed metal complexes were found to be highly stable and water insoluble on interaction with essential metal ions in solvent medium as well as over silica. Density functional theory (DFT) calculations not only reinforced the experimental observations, but, after a wide computational conformational analysis, unraveled the nature of the high stable undesired species that consist of pesticides complexed by metal ions from the soil. All in all, apart from the direct toxicity of pesticides, the indirect effect by means of complexation of free metal ions impoverishes the soil.

[Distribution characteristics of copper in soil and rape around Tongling mining area].

PubMed

Shen, Chang-Gao; Gao, Chao; Wang, Deng-Feng; Wang, Lei; Chen, Fu-Rong

2007-10-01

Soil and rape samples around Tongling mining area were collected, and their copper (Cu) contents were investigated. The results showed that the upland soil developed on the slope deposit around the mining area as well as the paddy soil distributed in lower reaches was heavily polluted by Cu, while the fluvo-aquic soil further from the mining area was less contaminated. Though the Cu content in paddy soil and upland soil was nearly the same, its bioavailability was higher in paddy soil, due to the Cu pollution of irrigated water. There was a significant correlation between available and total Cu in these three types of soil. The activation rate of soil Cu (percentage of available Cu in total Cu) was 15.0% on average, which was positively correlated with soil total Cu and organic matter while negatively correlated with soil pH and Mn. The average Cu content in rape seed and stalk was 4.0 and 5.8 mg x kg(-1), respectively. The rape Cu content increased obviously with increasing soil available Cu content when the soil available Cu content was relatively low, but the Cu absorption and accumulation by rape decreased gradually when the soil available copper content was higher than 30 mg x kg(-1).

Repeated phytoextraction of four metal-contaminated soils using the cadmium/zinc hyperaccumulator Sedum plumbizincicola.

PubMed

Li, Zhu; Wu, Longhua; Hu, Pengjie; Luo, Yongming; Zhang, Hao; Christie, Peter

2014-06-01

A cadmium/zinc hyperaccumulator extracted metals from four contaminated soils over three years in a glasshouse experiment. Changes in plant metal uptake and soil total (aqua regia-extractable) and available metals were investigated. Plant Cd concentrations in a high-Cd acid soil and plant Zn concentrations in two acid soils decreased during repeated phytoextraction and were predicted by soil available metal concentrations. However, on repeated phytoextraction, plant Cd concentrations remained constant in lightly Cd-polluted acid soils, as did plant Cd and Zn in alkaline soils, although soil available metal concentrations decreased markedly. After phytoextraction acid soils showed much higher total metal removal efficiencies, indicating possible suitability of phytoextraction for acid soils. However, DGT-testing, which takes soil metal re-supply into consideration, showed substantial removal of available metal and distinct decreases in metal supply capacity in alkaline soils after phytoextraction, suggesting that a strategy based on lowering the bioavailable contaminant might be feasible. Copyright © 2014 Elsevier Ltd. All rights reserved.

Differential priming of soil carbon driven by soil depth and root impacts on carbon availability

DOE Office of Scientific and Technical Information (OSTI.GOV)

de Graaff, Marie-Anne; Jastrow, Julie D.; Gillette, Shay

2013-11-15

Enhanced root-exudate inputs can stimulate decomposition of soil carbon (C) by priming soil microbial activity, but the mechanisms controlling the magnitude and direction of the priming effect remain poorly understood. With this study we evaluated how differences in soil C availability affect the impact of simulated root exudate inputs on priming. We conducted a 60-day laboratory incubation with soils collected (60 cm depth) from under six switchgrass (Panicum virgatum) cultivars. Differences in specific root length (SRL) among cultivars were expected to result in small differences in soil C inputs and thereby create small differences in the availability of recent labilemore » soil C; whereas soil depth was expected to create large overall differences in soil C availability. Soil cores from under each cultivar (roots removed) were divided into depth increments of 0–10, 20–30, and 40–60 cm and incubated with addition of either: (1) water or (2) 13C-labeled synthetic root exudates (0.7 mg C/g soil). We measured CO2 respiration throughout the experiment. The natural difference in 13C signature between C3 soils and C4 plants was used to quantify cultivar-induced differences in soil C availability. Amendment with 13C-labeled synthetic root-exudate enabled evaluation of SOC priming. Our experiment produced three main results: (1) switchgrass cultivars differentially influenced soil C availability across the soil profile; (2) small differences in soil C availability derived from recent root C inputs did not affect the impact of exudate-C additions on priming; but (3) priming was greater in soils from shallow depths (relatively high total soil C and high ratio of labile-to-stable C) compared to soils from deep depths (relatively low total soil C and low ratio of labile-to-stable C). These findings suggest that the magnitude of the priming effect is affected, in part, by the ratio of root exudate C inputs to total soil C and that the impact of changes in exudate inputs on the priming of SOC is regulated differently in surface soil compared to subsoil.« less

Laboratory Measurements of Oxygen Gas Release from Basaltic Minerals Exposed to UV- Radiation: Implications for the Viking Gas Exchange Experiments

NASA Astrophysics Data System (ADS)

Hurowitz, J. A.; Yen, A. S.

2007-12-01

The biology experiments onboard the Viking Landers determined that the Martian soils at Chryse and Utopia Planitia contain an unknown chemical compound of a highly oxidizing nature. The Gas Exchange Experiments (GEx) demonstrated that the humidification of a 1-cc Martian soil sample resulted in the production of as much as 790 nanomoles of oxygen gas. Yen et al. (2000) have provided experimental evidence that superoxide radicals can be generated on plagioclase feldspar (labradorite) grain surfaces by exposure to ultraviolet (UV) light in the presence of oxygen gas. Adsorbed superoxide radicals are thought to react readily with water vapor, and produce oxygen gas in quantities sufficient to explain the Viking GEx results. Direct evidence for the formation of oxygen gas, however, was not provided in the experiments of Yen et al (2000). Accordingly, the motivation of this study is to determine whether superoxide radicals adsorbed on labradorite surfaces are capable of producing oxygen gas upon exposure to water vapor. We have constructed an experimental apparatus that is capable of monitoring oxygen gas release from basaltic mineral powders that have been exposed to UV-radiation under Martian atmospheric pressure conditions. The apparatus consists of a stainless-steel vacuum chamber with a UV- transparent window where sample radiation exposures are performed. The vacuum chamber has multiple valved ports for injection of gases and water vapor. The vacuum chamber is connected via a precision leak valve to a quadrupole mass spectrometer, which measures changes in the composition of the headspace gases over our mineral samples. We will report on the results of our experiments, which are aimed at detecting and quantifying oxygen gas release from UV-exposed basaltic mineral samples using this new experimental facility. These results will further constrain whether superoxide ions adsorbed on mineral surfaces provide a viable explanation for the Viking GEx results, which have been of considerable controversy in the roughly three decades since the measurements were first made.

[Biological treatments for contaminated soils: hydrocarbon contamination. Fungal applications in bioremediation treatment].

PubMed

Martín Moreno, Carmen; González Becerra, Aldo; Blanco Santos, María José

2004-09-01

Bioremediation is a spontaneous or controlled process in which biological, mainly microbiological, methods are used to degrade or transform contaminants to non or less toxic products, reducing the environmental pollution. The most important parameters to define a contaminated site are: biodegradability, contaminant distribution, lixiviation grade, chemical reactivity of the contaminants, soil type and properties, oxygen availability and occurrence of inhibitory substances. Biological treatments of organic contaminations are based on the degradative abilities of the microorganisms. Therefore the knowledge on the physiology and ecology of the biological species or consortia involved as well as the characteristics of the polluted sites are decisive factors to select an adequate biorremediation protocol. Basidiomycetes which cause white rot decay of wood are able to degrade lignin and a variety of environmentally persistent pollutants. Thus, white rot fungi and their enzymes are thought to be useful not only in some industrial process like biopulping and biobleaching but also in bioremediation. This paper provides a review of different aspects of bioremediation technologies and recent advances on ligninolytic metabolism research.

Cadmium accumulation in and tolerance of rice (Oryza sativa L.) varieties with different rates of radial oxygen loss.

PubMed

Wang, M Y; Chen, A K; Wong, M H; Qiu, R L; Cheng, H; Ye, Z H

2011-06-01

Cadmium (Cd) uptake and tolerance were investigated among 20 rice cultivars based on a field experiment (1.2 mg Cd kg⁻¹ in soil) and a soil pot trial (control, 100 mg Cd kg⁻¹), and rates of radial oxygen loss (ROL) were measured under a deoxygenated solution. Significant differences were found among the cultivars in: (1) brown rice Cd concentrations (0.11-0.29 mg kg⁻¹) in a field soil, (2) grain Cd tolerance (34-113%) and concentrations (2.1-6.5 mg kg⁻¹) in a pot trial, and (3) rates of ROL (15-31 mmol O₂ kg⁻¹ root d.w. h⁻¹). Target hazard quotients were calculated for the field experiment to assess potential Cd risk. Significant negative relationships were found between rates of ROL and concentrations of Cd in brown rice or straw under field and greenhouse conditions, indicating that rice cultivars with higher rates of ROL had higher capacities for limiting the transfer of Cd to rice and straw. Copyright © 2011 Elsevier Ltd. All rights reserved.

Breaking The Enzymatic Latch: Do Anaerobic Conditions Constrain Decomposition In Humid Tropical Forest Soil?

NASA Astrophysics Data System (ADS)

Hall, S. J.; Silver, W. L.

2011-12-01

Anaerobic conditions have been proposed to impose a "latch" on soil organic matter decomposition by inhibiting the activity of extracellular enzymes that catalyze the transformation of organic polymers into monomers for microbial assimilation. Here, we tested the hypothesis that anaerobiosis inhibits soil hydrolytic enzyme activity in a humid tropical forest ecosystem in Puerto Rico. We sampled surface and sub-surface soil from each of 59 plots (n = 118) stratified across distinct topographical zones (ridges, slopes, and valleys) known to vary in soil oxygen (O2) concentrations, and measured the potential activity of five hydrolytic enzymes that decompose carbon (C), nitrogen (N), and phosphorus (P) substrates. We measured reduced iron (Fe (II)) concentrations in soil extractions to provide a spatially and temporally integrated index of anaerobic microbial activity, since iron oxides constitute the dominant anaerobic terminal electron acceptor in this ecosystem. Surprisingly, we observed positive relationships between Fe (II) concentrations and the activity of all enzymes that we assayed. Linear mixed effects models that included Fe (II) concentration, topographic position, and their interaction explained between 30 to 70 % of the variance of enzyme activity of β-1,4-glucosidase, β-cellobiohydrolase, β-xylosidase, N-acetylglucosaminidase, and acid phosphatase. Soils from ridges and slopes contained between 10 and 800 μg Fe (II) g-1 soil, and exhibited consistently positive relationships (p < 0.0001) between Fe (II) and enzyme activity. Valley soils did not display significant relationships between enzyme activity and Fe (II), although they displayed variation in soil Fe (II) concentrations similar to ridges and slopes. Overall, valleys exhibited lower enzyme activity and lower Fe (II) concentrations than ridges or slopes, possibly related to decreased root biomass and soil C. Our data provide no indication that anaerobiosis suppresses soil enzyme activity, but rather that high rates of decomposition induce a higher proportion of anaerobiosis soil microsites. The spatial patterns of Fe (II) concentrations that we observed also support this hypothesis. Soil Fe (II) concentrations were significantly greater in ridges than in slopes or valleys, in spite of the fact that slopes and valleys tend to experience higher soil moisture and lower bulk soil O2 concentrations. In our samples, Fe (II) concentrations correlated only weakly with ambient soil moisture, suggesting the importance of biological demand in controlling O2 availability as opposed to physical limitations on O2 diffusion imposed by soil moisture. In sum, our data suggest that anaerobic conditions do not necessarily constrain enzyme activity in humid tropical forest soils, and may not provide a proximate control on soil C storage in these ecosystems as has been recently proposed.

Linking Carbonic Anhydrase Abundance and Diversity in Soils to Ecological Function

NASA Astrophysics Data System (ADS)

Pang, E.; Meredith, L. K.; Welander, P. V.

2015-12-01

Carbonic anhydrase (CA) is an ancient enzyme widespread among bacteria, archaea, and eukarya that catalyzes the following reaction: CO2 + H2O ⇌ HCO3- + H+. Its functions are critical for key cellular processes such as concentrating CO2 for autotrophic growth, pH regulation, and pathogen survival in hosts. Currently, there are six known CA classes (α, β, γ, δ, η, ζ) arising from several distinct evolutionary lineages. CA are widespread in sequenced genomes, with many organisms containing multiple classes of CA or multiple CA of the same class. Soils host rich microbial communities with diverse and important ecological functions, but the diversity and abundance of CA in soils has not been explored. CA appears to play an important, but poorly understood, role in some biogeochemical cycles such as those of CO2 and its oxygen isotope composition and also carbonyl sulfide (COS), which are potential tracers in predictive carbon cycle models. Recognizing the prevalence and functional significance of CA in soils, we used a combined bioinformatics and molecular biology approach to address fundamental questions regarding the abundance, diversity, and function of CA in soils. To characterize the abundance and diversity of the different CA classes in soils, we analyzed existing soil metagenomic and metatranscriptomic data from the DOE Joint Genome Institute databases. Out of the six classes of CA, we only found the α, β, and γ classes to be present in soils, with the β class being the most abundant. We also looked at genomes of sequenced soil microorganisms to learn what combination of CA classes they contain, from which we can begin to predict the physiological role of CA. To characterize the functional roles of the different CA classes in soils, we collected soil samples from a variety of biomes with diverse chemical and physical properties and quantified the rate of two CA-mediated processes: soil uptake of COS and acceleration of the oxygen isotope exchange between CO2 and H2O. We employed PCR-based methods to quantify the abundance and diversity of CA encoding genes and their expression in our samples to link CA classes to the gas flux data. These studies provide the first survey of CA in soils, a step towards understanding CA's potentially significant role in microbial survival and microbe-mediated biogeochemical cycles.

The influence of woody encroachment on the nitrogen cycle: fixation, storage and gas loss

NASA Astrophysics Data System (ADS)

Soper, F.; Sparks, J. P.

2015-12-01

Woody encroachment is a pervasive land cover change throughout the tropics and subtropics. Encroachment is frequently catalyzed by nitrogen (N)-fixing trees and the resulting N inputs potentially alter whole-ecosystem N cycling, accumulation and loss. In the southern US, widespread encroachment by legume Prosopis glandulosa is associated with increased soil total N storage, inorganic N concentrations, and net mineralization and nitrification rates. To better understand the effects of this process on ecosystem N cycling, we investigated patterns of symbiotic N fixation, N accrual and soil N trace gas and N2 emissions during Prosopis encroachment into the southern Rio Grande Plains. Analyses of d15N in foliage, xylem sap and plant-available soil N suggested that N fixation rates increase with tree age and are influenced by abiotic conditions. A model of soil N accrual around individual trees, accounting for atmospheric inputs and gas losses, generates lifetimes N fixation estimates of up to 9 kg for a 100-year-old tree and current rates of 7 kg N ha-1 yr-1. However, these N inputs and increased soil cycling rates do not translate into increased N gas losses. Two years of field measurements of a complete suite of N trace gases (ammonia, nitrous oxide, nitric oxide and other oxidized N compounds) found no difference in flux between upland Prosopis groves and adjacent unencroached grasslands. Total emissions for both land cover types average 0.56-0.65 kg N ha-1 yr-1, comparable to other southern US grasslands. Additional lab experiments suggested that N2 losses are low and that field oxygen conditions are not usually conducive to denitrification. Taken together, results suggest that this ecosystem is currently experiencing a period of net N accrual under ongoing encroachment.

Biogeochemical controls on microbial CH4 and CO2 production in Arctic polygon tundra

NASA Astrophysics Data System (ADS)

Zheng, J.

2016-12-01

Accurately simulating methane (CH4) and carbon dioxide (CO2) emissions from high latitude soils is critically important for reducing uncertainties in soil carbon-climate feedback predictions. The signature polygonal ground of Arctic tundra generates high level of heterogeneity in soil thermal regime, hydrology and oxygen availability, which limits the application of current land surface models with simple moisture response functions. We synthesized CH4 and CO2 production measurements from soil microcosm experiments across a wet-to dry permafrost degradation gradient from low-centered (LCP) to flat-centered (FCP), and high-centered polygons (HCP) to evaluate the relative importance of biogeochemical processes and their response to warming. More degraded polygon (HCP) showed much less carbon loss as CO2 or CH4, while the total CO2 production from FCP is comparable to that from LCP. Maximum CH4 production from the active layer of LCP was nearly 10 times that of permafrost and FCP. Multivariate analyses identifies gravimetric water content and organic carbon content as key predictors for CH4 production, and iron reduction as a key regulator of pH. The synthesized data are used to validate the geochemical model PHREEQC with extended anaerobic organic substrate turnover, fermentation, iron reduction, and methanogenesis reactions. Sensitivity analyses demonstrate that better representations of anaerobic processes and their pH dependency could significantly improve estimates of CH4 and CO2 production. The synthesized data suggest local decreases in CH4 production along the polygon degradation gradient, which is consistent with previous surface flux measurements. Methane oxidation occurring through the soil column of degraded polygons contributes to their low CH4 emissions as well.

Large fluxes and rapid turnover of mineral-associated carbon across topographic gradients in a humid tropical forest: insights from paired 14C analysis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hall, S. J.; McNicol, G.; Natake, T.

2015-04-29

It has been proposed that the large soil carbon (C) stocks of humid tropical forests result predominantly from C stabilization by reactive minerals, whereas oxygen (O 2) limitation of decomposition has received much less attention. We examined the importance of these factors in explaining patterns of C stocks and turnover in the Luquillo Experimental Forest, Puerto Rico, using radiocarbon ( 14C) measurements of contemporary and archived samples. Samples from ridge, slope, and valley positions spanned three soil orders (Ultisol, Oxisol, Inceptisol) representative of humid tropical forests, and differed in texture, reactive metal content, O 2 availability, and root biomass. Mineral-associatedmore » C comprised the large majority (87 ± 2%, n = 30) of total soil C. Turnover of most mineral-associated C (66 ± 2%) was rapid (11 to 26 years; mean and SE: 18 ± 3 years) in 25 of 30 soil samples across surface horizons (0–10 and 10–20 cm depths) and all topographic positions, independent of variation in reactive metal concentrations and clay content. Passive C with centennial–millennial turnover was typically much less abundant (34 ± 3%), even at 10–20 cm depths. Carbon turnover times and concentrations significantly increased with concentrations of reduced iron (Fe(II)) across all samples, suggesting that O 2 availability may have limited the decomposition of mineral-associated C over decadal scales. Steady-state inputs of mineral-associated C were statistically similar among the three topographic positions, and could represent 10–25% of annual litter production. Observed trends in mineral-associated Δ 14C over time could not be fit using the single-pool model used in many other studies, which generated contradictory relationships between turnover and Δ 14C as compared with a more realistic two-pool model. The large C fluxes in surface and near-surface soils documented here are supported by findings from paired 14C studies in other types of ecosystems, and suggest that most mineral-associated C cycles relatively rapidly (decadal scales) across ecosystems that span a broad range of state factors.« less

PVIScreen

EPA Pesticide Factsheets

PVIScreen extends the concepts of a prior model (BioVapor), which accounted for oxygen-driven biodegradation of multiple constituents of petroleum in the soil above the water table. Typically, the model is run 1000 times using various factors.

Assessment of sulfide production risk in soil during the infiltration of domestic wastewater treated by a sulfur-utilizing denitrification process.

PubMed

Ghorbel, L; Coudert, L; Gilbert, Y; Mercier, G; Blais, J F

2016-10-01

This study aimed to determine the potential of sulfide generation during infiltration through soil of domestic wastewater treated by a sulfur-utilizing denitrification process. Three types of soil with different permeability rates (K s = 0.028, 0.0013, and 0.00015 cm/s) were investigated to evaluate the potential risk of sulfur generation during the infiltration of domestic wastewater treated by a sulfur-utilizing denitrification system. These soils were thoroughly characterized and tested to assess their capacity to be used as drainages for wastewaters. Experiments were conducted under two operating modes (saturated and unsaturated). Sulfate, sulfide, and chemical oxygen demand (COD) levels were determined over a period of 100 days. Despite the high concentration of sulfates (200 mg/L) under anaerobic conditions (ORP = -297 mV), no significant amount of sulfide was generated in the aqueous (<0.2 mg/L) or gaseous (<0.15 ppm) phases. Furthermore, the soil permeability did not have a noticeable effect on the infiltration of domestic wastewater treated by a sulfur-utilizing denitrification system due to low contents of organic matter (i.e., dissolved organic carbon, DOC). The autotrophic denitrification process used to treat the domestic wastewater allowed the reduction of the concentration of biochemical oxygen demand (BOD5) below 5 mg/L, of DOC below 7 mg/L, and of COD below 100 mg/L.

Methane oxidation linked to chlorite dismutation

USGS Publications Warehouse

Miller, Laurence G.; Baesman, Shaun M.; Carlström, Charlotte I.; Coates, John D.; Oremland, Ronald S.

2014-01-01

We examined the potential for CH4 oxidation to be coupled with oxygen derived from the dissimilatory reduction of perchlorate, chlorate, or via chlorite (ClO−2) dismutation. Although dissimilatory reduction of ClO−4 and ClO−3 could be inferred from the accumulation of chloride ions either in spent media or in soil slurries prepared from exposed freshwater lake sediment, neither of these oxyanions evoked methane oxidation when added to either anaerobic mixed cultures or soil enriched in methanotrophs. In contrast, ClO−2 amendment elicited such activity. Methane (0.2 kPa) was completely removed within several days from the headspace of cell suspensions of Dechloromonas agitata CKB incubated with either Methylococcus capsulatus Bath or Methylomicrobium album BG8 in the presence of 5 mM ClO−2. We also observed complete removal of 0.2 kPa CH4 in bottles containing soil enriched in methanotrophs when co-incubated with D. agitata CKB and 10 mM ClO−2. However, to be effective these experiments required physical separation of soil from D. agitata CKB to allow for the partitioning of O2 liberated from chlorite dismutation into the shared headspace. Although a link between ClO−2 and CH4 consumption was established in soils and cultures, no upstream connection with either ClO−4 or ClO−3 was discerned. This result suggests that the release of O2 during enzymatic perchlorate reduction was negligible, and that the oxygen produced was unavailable to the aerobic methanotrophs.

JSC Mars-1 Martian Soil Simulant: Melting Experiments and Electron Microprobe Studies

NASA Technical Reports Server (NTRS)

Carpenter, P.; Sebille, L.; Boles, W.; Chadwell, M.; Schwarz, L.

2003-01-01

JSC Mars-1 has been developed as a Martian regolith simulant, and is the <1 mm size fraction of a palagonitic tephra (a glassy volcanic ash altered at low temperatures) from Pu'u Nene cinder cone on the Island of Hawaii. The Mars-1 simulant forms the basis for numerous terrestrial studies which aim to evaluate the suitability of Martian soil for materials processing. Martian soil may be sintered to form building materials for construction, and also melted or reacted to extract metals for various uses, as well as oxygen for life support.

Oxygen Isotope Compositions of Meteoric Water Across an Elevation Gradient in Southern Peru

NASA Astrophysics Data System (ADS)

Xu, D. R.; White, E.; Cassel, E. J.; Lynch, B.; Yanites, B.; Breecker, D.

2017-12-01

The Central Andes is a prime example of elevated topography generated by oceanic plate subduction. Whereas previous stable isotope studies have investigated the paleoelevation of the Andean Eastern Cordillera, little is known about the paleoelevation of the Western Cordillera, where arc volcanism now occurs. As a first step towards studying the paleoelevation of this region, we investigated the change in δ18O values of modern soil waters across an elevation gradient from sea level to about 4725 meters in southern Peru. We sampled soil profiles from 5 to 80 cm in 15-20cm increments, and we sampled water from flowing natural streams at various elevations. We used cryogenic vacuum extraction to quantitatively remove non-structural water from soil samples. The δ18O values of water extracted from soil samples varies with the depth in the soil due to the diminishing effect of seasonality and evaporation. Every high elevation (>3500m) soil profile we measured had nearly constant δ18O values below 5cm and a total range of δ18O values between -12.8‰ and -17.1‰, apart from the Cusco profile. In the Cusco profile, the δ18O values ranged from -7.2 ‰ at 5 cm to -21.8 ‰ at 60 cm, defining a strong monotonic decrease not seen in other soil profiles. The δ18O trend in the Cusco profile may be different due to the impact of evaporation, soil hydrology, and/or seasonality in the δ18O values of precipitation. Further spatial analysis must be conducted to pinpoint a specific cause. Considering only the samples collected below 40cm, which are likely the best estimate of mean annual precipitation, the δ18O values decrease with increasing elevation at a rate higher than the global mean, suggesting that oxygen isotope paleoaltimetry can work in this study region.

Method for fixating sludges and soils contaminated with mercury and other heavy metals

DOEpatents

Broderick, Thomas E.; Roth, Rachel L.; Carlson, Allan L.

2005-06-28

The invention relates to a method, composition and apparatus for stabilizing mercury and other heavy metals present in a particulate material such that the metals will not leach from the particulate material. The method generally involves the application of a metal reagent, a sulfur-containing compound, and the addition of oxygen to the particulate material, either through agitation, sparging or the addition of an oxygen-containing compound.

Oxygen isotope corrections for online δ34S analysis

USGS Publications Warehouse

Fry, B.; Silva, S.R.; Kendall, C.; Anderson, R.K.

2002-01-01

Elemental analyzers have been successfully coupled to stable-isotope-ratio mass spectrometers for online measurements of the δ34S isotopic composition of plants, animals and soils. We found that the online technology for automated δ34S isotopic determinations did not yield reproducible oxygen isotopic compositions in the SO2 produced, and as a result calculated δ34S values were often 1–3‰ too high versus their correct values, particularly for plant and animal samples with high C/S ratio. Here we provide empirical and analytical methods for correcting the S isotope values for oxygen isotope variations, and further detail a new SO2-SiO2 buffering method that minimizes detrimental oxygen isotope variations in SO2.

[Origin of the oxygen detected by the Viking stations in an analysis of Mars soil].

PubMed

Imshenetskiĭ, A A; Murzakov, B G; Dorofeeva, I K

1978-01-01

Reactions between the mineral limonite and hydrogen peroxide were studied and gases produced thereupon were analysed by gas chromatography. Oxygen did not evolve if limonite was added to hydrogen peroxide frozen at a temperature of dry ice. However, at room temperature, a vigorous chemical reaction occurred and a large amount of oxygen evolved. Apparently, the ground of Mars contains not only hydrated iron oxides but also frozen hydrogen peroxide whose thawing in the incubation chamber of Viking resulted in its catalytic degradation under the action of iron ions. The evidence thus obtained and its comparison with the data of American scientists account for considerable evolution of oxygen detected by Viking upon analysis of the Mars ground.

Martian Environment Electrostatic Precipitator

NASA Technical Reports Server (NTRS)

McDougall, Michael Owen

2016-01-01

As part of the planned manned mission to Mars, NASA has noticed that shipping oxygen as a part of life support to keep the astronauts alive continuously is overly expensive, and impractical. As such, noting that the Martian atmosphere is 95.37% CO2, NASA chemists noted that one could obtain oxygen from the Martian atmosphere. The plan, as part of a larger ISRU (in-situ resource utilization) initiative, would extract water from the regolith, or the Martian soil which can be electrolyzed by solar panel produced voltage into hydrogen and oxygen. The hydrogen can then be used in the Sabatier reaction with carbon dioxide to produce methane and water producing a net reaction that does not lose water and outputs methane and oxygen for use as rocket fuel and breathing.

Analysis of Atmospheric Nitrate Deposition in Lake Tahoe Using Multiple Oxygen Isotopes

NASA Astrophysics Data System (ADS)

McCabe, J. R.; Michalski, G. M.; Hernandez, L. P.; Thiemens, M. H.; Taylor, K.; Kendall, C.; Wankel, S. D.

2002-12-01

Lake Tahoe in the Sierra Nevada Mountain Range is world renown for its depth and water clarity bringing 2.2 million visitors per year resulting in annual revenue of \\1.6 billion from tourism. In past decades the lake has suffered from decreased water clarity (from 32 m plate depth to less than 20), which is believed to be largely the result of algae growth initiated by increased nutrient loading. Lake nutrients have also seen a shift from a nitrogen limited to a phosphorous limited system indicating a large increase in the flux of fixed nitrogen. Several sources of fixed nitrogen of have been suggested including surface runoff, septic tank seepage from ground water and deposition from the atmosphere. Bio-available nitrogen in the form of nitrate (NO_{3}$-) is a main component of this system. Recent studies have estimated that approximately 50% of the nitrogen input into the lake is of atmospheric origin (Allison et al. 2000). However, the impact and magnitude of atmospheric deposition is still one of the least understood aspects of the relationship between air and water quality in the Basin (TRPA Threshold Assessment 2002). The utility of stable isotopes as tracers of nitrate reservoirs has been shown in several studies (Bohlke et al. 1997, Kendall and McDonnell 1998, Durka et al. 1994). Stable nitrogen (δ15N) and oxygen (δ18O) isotopes have been implemented in a dual isotope approach to characterize the various nitrate sources to an ecosystem. While δ18O distinguishes between atmospheric and soil sources of nitrate, processes such as denitrification can enrich the residual nitrate in δ18O leaving a misleading atmospheric signature. The benefit of δ15N as a tracer for NO3- sources is the ability to differentiate natural soil, fertilizer, and animal or septic waste, which contain equivalent δ18O values. The recent implementation of multiple oxygen isotopes to measure Δ17O in nitrate has proven to be a more sensitive tracer of atmospheric deposition. The oxygen isotopes of atmospheric nitrate are mass-independently fractionated and contain Δ17O values of 20 to 30 \\permil, while all other sources are mass dependent (Δ17O = 0 \\permil). Any subsequent fractionation of the atmospheric nitrate will leave the mass-independent signature unchanged making Δ17O of nitrate a conservative tracer of atmospheric nitrate. Results from measurements of the oxygen isotope composition of nitrate in Lake Tahoe are used to resolve the atmospheric contribution.

Community Composition of Nitrous Oxide Consuming Bacteria in the Oxygen Minimum Zone of the Eastern Tropical South Pacific

PubMed Central

Sun, Xin; Jayakumar, Amal; Ward, Bess B.

2017-01-01

The ozone-depleting and greenhouse gas, nitrous oxide (N2O), is mainly consumed by the microbially mediated anaerobic process, denitrification. N2O consumption is the last step in canonical denitrification, and is also the least O2 tolerant step. Community composition of total and active N2O consuming bacteria was analyzed based on total (DNA) and transcriptionally active (RNA) nitrous oxide reductase (nosZ) genes using a functional gene microarray. The total and active nosZ communities were dominated by a limited number of nosZ archetypes, affiliated with bacteria from marine, soil and marsh environments. In addition to nosZ genes related to those of known marine denitrifiers, atypical nosZ genes, related to those of soil bacteria that do not possess a complete denitrification pathway, were also detected, especially in surface waters. The community composition of the total nosZ assemblage was significantly different from the active assemblage. The community composition of the total nosZ assemblage was significantly different between coastal and off-shore stations. The low oxygen assemblages from both stations were similar to each other, while the higher oxygen assemblages were more variable. Community composition of the active nosZ assemblage was also significantly different between stations, and varied with N2O concentration but not O2. Notably, nosZ assemblages were not only present but also active in oxygenated seawater: the abundance of total and active nosZ bacteria from oxygenated surface water (indicated by nosZ gene copy number) was similar to or even larger than in anoxic waters, implying the potential for N2O consumption even in the oxygenated surface water. PMID:28702012

Community Composition of Nitrous Oxide Consuming Bacteria in the Oxygen Minimum Zone of the Eastern Tropical South Pacific.

PubMed

Sun, Xin; Jayakumar, Amal; Ward, Bess B

2017-01-01

The ozone-depleting and greenhouse gas, nitrous oxide (N 2 O), is mainly consumed by the microbially mediated anaerobic process, denitrification. N 2 O consumption is the last step in canonical denitrification, and is also the least O 2 tolerant step. Community composition of total and active N 2 O consuming bacteria was analyzed based on total (DNA) and transcriptionally active (RNA) nitrous oxide reductase ( nosZ ) genes using a functional gene microarray. The total and active nosZ communities were dominated by a limited number of nosZ archetypes, affiliated with bacteria from marine, soil and marsh environments. In addition to nosZ genes related to those of known marine denitrifiers, atypical nosZ genes, related to those of soil bacteria that do not possess a complete denitrification pathway, were also detected, especially in surface waters. The community composition of the total nosZ assemblage was significantly different from the active assemblage. The community composition of the total nosZ assemblage was significantly different between coastal and off-shore stations. The low oxygen assemblages from both stations were similar to each other, while the higher oxygen assemblages were more variable. Community composition of the active nosZ assemblage was also significantly different between stations, and varied with N 2 O concentration but not O 2 . Notably, nosZ assemblages were not only present but also active in oxygenated seawater: the abundance of total and active nosZ bacteria from oxygenated surface water (indicated by nosZ gene copy number) was similar to or even larger than in anoxic waters, implying the potential for N 2 O consumption even in the oxygenated surface water.

Identifying biogeochemical processes beneath stormwater infiltration ponds in support of a new best management practice for groundwater protection

USGS Publications Warehouse

O'Reilly, Andrew M.; Chang, Ni-Bin; Wanielista, Martin P.; Xuan, Zhemin; Schirmer, Mario; Hoehn, Eduard; Vogt, Tobias

2011-01-01

 When applying a stormwater infiltration pond best management practice (BMP) for protecting the quality of underlying groundwater, a common constituent of concern is nitrate. Two stormwater infiltration ponds, the SO and HT ponds, in central Florida, USA, were monitored. A temporal succession of biogeochemical processes was identified beneath the SO pond, including oxygen reduction, denitrification, manganese and iron reduction, and methanogenesis. In contrast, aerobic conditions persisted beneath the HT pond, resulting in nitrate leaching into groundwater. Biogeochemical differences likely are related to soil textural and hydraulic properties that control surface/subsurface oxygen exchange. A new infiltration BMP was developed and a full-scale application was implemented for the HT pond. Preliminary results indicate reductions in nitrate concentration exceeding 50% in soil water and shallow groundwater beneath the HT pond.

Spatial variability assessment of soil nutrients in an intense agricultural area, a case study of Rugao County in Yangtze River Delta Region, China

NASA Astrophysics Data System (ADS)

Zhao, Yongcun; Xu, Xianghua; Darilek, Jeremy Landon; Huang, Biao; Sun, Weixia; Shi, Xuezheng

2009-05-01

Topsoil samples (0-20 cm) ( n = 237) were collected from Rugao County, China. Geostatistical variogram analysis, sequential Gaussian simulation (SGS), and principal component (PC) analysis were applied to assess spatial variability of soil nutrients, identify the possible areas of nutrient deficiency, and explore spatial scale of variability of soil nutrients in the county. High variability of soil nutrient such as soil organic matter (SOM), total nitrogen (TN), available P, K, Fe, Mn, Cu, Zn, and B concentrations were observed. Soil nutrient properties displayed significant differences in their spatial structures, with available Cu having strong spatial dependence, SOM and available P having weak spatial dependence, and other nutrient properties having moderate spatial dependence. The soil nutrient deficiency, defined here as measured nutrient concentrations which do not meet the advisory threshold values specific to the county for dominant crops, namely rice, wheat, and rape seeds, was observed in available K and Zn, and the deficient areas covered 38 and 11%, respectively. The first three PCs of the nine soil nutrient properties explained 62.40% of the total variance. TN and SOM with higher loadings on PC1 are closely related to soil texture derived from different parent materials. The PC2 combined intermediate response variables such as available Zn and P that are likely to be controlled by land use and soil pH. Available B has the highest loading on PC3 and its variability of concentrations may be primarily ascribed to localized anthropogenic influence. The amelioration of soil physical properties (i.e. soil texture) and soil pH may improve the availability of soil nutrients and the sustainability of the agricultural system of Rugao County.

Determination of chemical availability of cadmium and zinc in soils using inert soil moisture samplers.

PubMed

Knight, B P; Chaudri, A M; McGrath, S P; Giller, K E

1998-01-01

A rapid method for extracting soil solutions using porous plastic soil-moisture samplers was combined with a cation resin equilibration based speciation technique to look at the chemical availability of metals in soil. Industrially polluted, metal sulphate amended and sewage sludge treated soils were used in our study. Cadmium sulphate amended and industrially contaminated soils all had > 65% of the total soil solution Cd present as free Cd2+. However, increasing total soil Cd concentrations by adding CdSO4 resulted in smaller total soil solution Cd. Consequently, the free Cd2+ concentrations in soil solutions extracted from these soils were smaller than in the same soil contaminated by sewage sludge addition. Amendment with ZnSO4 gave much greater concentrations of free Zn2+ in soil solutions compared with the same soil after long-term Zn contamination via sewage sludge additions. Our results demonstrate the difficulty in comparing total soil solution and free metal ion concentrations for soils from different areas with different physiochemical properties and sources of contamination. However, when comparing the same Woburn soil, Cd was much less available as Cd2+ in soil solution from the CdSO4 amended soils compared with soil contaminated by about 36 years of sewage sludge additions. In contrast, much more Zn was available in soil solution as free Zn2+ in the ZnSO4 amended soils compared with the sewage sludge treated soils.

Dissipation of available benzo[a]pyrene in aging soil co-contaminated with cadmium and pyrene.

PubMed

Wang, Kai; Chen, Xin-xin; Zhu, Zhi-qiang; Huang, Hua-gang; Li, Ting-qiang; Yang, Xiao-e

2014-01-01

A microcosm experiment was conducted to investigate the dissipation of available benzo[a]pyrene (BaP) in soils co-contaminated with cadmium (Cd) and pyrene (PYR) during aging process. The available residue of BaP in soil was separated into desorbing and non-desorbing fractions. The desorbing fraction contributed more to the dissipation of available BaP than the non-desorbing fraction did. The concentration of bound-residue fraction of BaP was quite low across all treatments. Within the duration of this study (250 days), transformation of BaP from available fractions to bound-residue fraction was not observed. Microbial degradation was the dominant mechanism of the dissipation of available BaP in the soil. The dissipation of available BaP was significantly inhibited with the increment in Cd level in the soil. The addition of PYR (250 mg kg(-1)) remarkably promoted the dissipation of available BaP without reducing Cd availability in the soil. The calculated half-life of available BaP in the soil prolonged with the increment in Cd level; however, the addition of PYR shortened the half-life of available BaP by 13.1, 12.7, and 32.8% in 0.44, 2.56, and 22 mg Cd kg(-1) soils, respectively. These results demonstrated that the inhibiting effect of Cd and the promoting effect of PYR on the dissipation of available BaP were competitive. Therefore, this study shows that the bioremediation process of BaP can be more complicated in co-contaminated soils.

Environmental Assessment Addressing the Emerald Breeze Resort, Santa Rosa Island, Fort Walton Beach, Florida

DTIC Science & Technology

2009-09-11

conditions in their upper part. Anaerobic soil conditions are conducive to the establishment of vegetation that is adapted for growth under oxygen...sufficient to support, and that under normal circumstances do support, a prevalence of vegetation typically adapted to life in saturated soil...species adapted to dense commercial development and heavy vehicular traffic would be expected to move back into the area after development of the

Antibiotic Production by Anaerobic Bacteria1

PubMed Central

Sturgen, Nancy O.; Casida, L. E.

1962-01-01

Soils from aerobic and anaerobic sources were investigated for the possible presence of bacteria which produce antibiotics under anaerobic conditions of growth. The screening techniques devised for this study yielded 157 soil bacteria which, during anaerobic growth, produced antibiotic activity against aerobic test bacteria. Studies on choice of media, presence of oxygen, and changes in antibiotic activity during growth indicated that representative strains of these bacteria produced mixtures of antibiotics. The activity was heat labile. PMID:13918037

Carbon and nitrogen limitation explain the contrasting responses of rhizospheric N-cycling microbial communities to maize inoculation by Azospirillum lipoferum CRT1

NASA Astrophysics Data System (ADS)

Florio, Alessandro; Pommier, Thomas; Gervaix, Jonathan; Bréfort, Caroline; Bérard, Annette; Le Roux, Xavier

2017-04-01

Introduction Maize inoculation with the plant-growth promoting rhizobacterium Azospirillum stimulates root growth and carbon, C, exudation, thereby enabling a better exploitation of soil and enhancing plant uptake of nitrogen, N. This can modulate the availability of N in the rhizosphere, by enhancing plant-microbe competition for N and modifying rhizosphere environmental variables important for N-cycling microbial communities, i.e. the amount of soil mineral N and oxygen availability. We tested the hypothesis that inoculation-induced stimulation of root N uptake and C exudation would enhance plant competition over microorganisms for N while increasing C availability for heterotrophs, thus leading to (i) a decrease of nitrifier abundance and activity, and (ii) a decrease or increase of denitrifier abundance and activity depending on the level of denitrifier limitation by N and C. Methods The extent of inoculation-induced changes in microbial activities (potential nitrification and denitrification), abundances and diversity of (de)nitrifiers as well as in root functional traits was assessed at 4 dates over two consecutive years in a multi-site field trial. Measurements were performed for the 6- and 12-leaves maize stages. In a second experiment, we artificially altered the level of denitrifier limitation by N and C in a greenhouse pot experiment by applying synthetic root exudates to inoculated and non-inoculated maize plants. Inoculation-induced response to nutrient limitation on microbial N-related activities and abundances was assessed for the 6-leaves stage maizeplants. Results Inoculation resulted in an idiosyncratic response of nitrification and nitrifier (AOA, AOB) abundance, which varied from one sampling date to another at a given site, and between sites and treatments at a given date. Modifications of water balance and soil moisture rather than increased plant-nitrifiers competition for soil NH4+ were the main drivers of nitrification. Conversely, inoculation-induced changes in denitrifier activity and abundance (nirK, nirS) were consistent across sites and ranged from -23% to +84% depending on sites. Particularly, in soils with high C limitation levels, inoculation increased nirS-denitrifier abundance and denitrification, likely by stimulating root C exudation. Conversely, in soils with lower C limitation, the stimulating effect of inoculation on root C exudation was less critical for denitrifiers whereas the increased competition between roots and denitrifiers for NO3- became prominent, thus resulting in slightly decreased nirS-denitrifier abundance and denitrification. Pot experiment results revealed that the inoculation effect on denitrification decreased with increased amount of root exudates-like amended to soil. Discussion Maize seed inoculation with the beneficial Azospirillum lipoferum CRT1 can be a sustainable, though soil-specific, agricultural practice providing both beneficial agronomic and environmental effects. Our findings may indicate that the crop seed inoculation practice would increase potential N2O losses from agricultural soils where denitrifiers are highly C-limited. However, our results also demonstrate that the responses of nitrite reducers and N2O reducers to inoculation are tightly coupled, and that inoculation thus does not necessarily represent a risk for increased N2O losses from C-limited soils. Finally, the nirS-denitrifier abundance to microbial basal respiration ratio could be successfully used as a proxy of gaseous-N losses through denitrification from the soil-plant system following inoculation.

Sources of oxygen flux in groundwater during induced bank filtration at a site in Berlin, Germany

NASA Astrophysics Data System (ADS)

Kohfahl, Claus; Massmann, Gudrun; Pekdeger, Asaf

2009-05-01

The microbial degradation of pharmaceuticals found in surface water used for artificial recharge is strongly dependent on redox conditions of the subsurface. Furthermore the durability of production wells may decrease considerably with the presence of oxygen and ferrous iron due to the precipitation of trivalent iron oxides and subsequent clogging. Field measurements are presented for oxygen at a bank filtration site in Berlin, Germany, along with simplified calculations of different oxygen pathways into the groundwater. For a two-dimensional vertical cross-section, oxygen input has been calculated for six scenarios related to different water management strategies. Calculations were carried out in order to assess the amount of oxygen input due to (1) the infiltration of oxic lake water, (2) air entrapment as a result of water table oscillations, (3) diffusive oxygen flux from soil air and (4) infiltrating rainwater. The results show that air entrapment and infiltrating lake water during winter constitute by far the most important mechanism of oxygen input. Oxygen input by percolating rainwater and by diffusive delivery of oxygen in the gas phase is negligible. The results exemplify the importance of well management as a determining factor for water oscillations and redox conditions during artificial recharge.

Inoculating chlamydospores of Trichoderma asperellum SM-12F1 changes arsenic availability and enzyme activity in soils and improves water spinach growth.

PubMed

Su, Shiming; Zeng, Xibai; Bai, Lingyu; Williams, Paul N; Wang, Yanan; Zhang, Lili; Wu, Cuixia

2017-05-01

Arsenic (As)-contaminated agricultural soils threaten crop yields and pose a human health risk. Augmentation of exogenous microorganisms exhibiting plant-growth promoting and As speciation changing shows potential to improve crop growth and change soil As availability. Trichoderma asperellum SM-12F1 exhibiting both traits was developed into chlamydospores to improve its persistence in contaminated soils. After inoculation, As availability and enzyme activity in two types of soils and the growth as well as As uptake of water spinach (Ipomoea aquatic Forsk.) were investigated. The results indicated that inoculation significantly improved water spinach growth in both soils. Inoculating chlamydospores at 5% significantly increased As concentration (139%), bioconcentration factor (150%), and translocation factor (150%) in water spinach grown in Chenzhou (CZ) soils, while no significant change for these in Shimen (SM) soils. Inoculating chlamydospores at 5% caused a significant increase (16%) of available As content in CZ soils, while a significant decrease (13%) in SM soils. Inoculation significantly caused As methylation in both soils, while significant As reduction merely observed in CZ soils. The differential changes in available As contents in both soils were attributed to the soil pH, As fractionations and speciation characteristics. Furthermore, Inoculating chlamydospores at 5% significantly improved the activities of β-glucosidase (155%), chitinase (211%), and phosphatase (108%) in SM soils, while significant decreases in β-glucosidase (81%), phosphatase (54%), aminopeptidase (60%), and catalase (67%) in CZ soils. Bioaugmentation and As availability change were responsible for this result. These observations will be helpful for the application of fungal chlamydospores in the future bioremediation. Copyright © 2017. Published by Elsevier Ltd.

Spatial variation in microbial processes controlling carbon mineralization within soils and sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fendorf, Scott; Kleber, Markus; Nico, Peter

Soils have a defining role in global carbon cycling, having one of the largest dynamic stocks of C on earth—3300 Pg of C are stored in soils, which is three-times the amount stored in the atmosphere and more than the terrestrial land plants. An important control on soil organic matter (SOM) quantities is the mineralization rate. It is well recognized that the rate and extent of SOM mineralization is affected by climatic factors and mineral-organic matter associations. What remained elusive is to what extent constraints on microbial metabolism induced by the respiratory pathway, and specifically the electron acceptor in respiration,more » control overall rates of carbon mineralization in soils. Therefore, physical factors limiting oxygen diffusion such as soil texture and aggregate size (soil structure) may therefore be central controls on C mineralization rates. The goal of our research was therefore to determine if variations in microbial metabolic rates induced by anaerobic microsites in soils are a major control on SOM mineralization rates and thus storage. We performed a combination of laboratory experiments and field investigations will be performed to fulfill our research objectives. We used laboratory studies to examine fundamental factors of respiratory constraints (i.e., electron acceptor) on organic matter mineralization rates. We ground our laboratory studies with both manipulation of field samples and in-field measurements. Selection of the field sites is guided by variation in soil texture and structure while having (other environmental/soil factors constant. Our laboratory studies defined redox gradients and variations in microbial metabolism operating at the aggregate-scale (cm-scale) within soils using a novel constructed diffusion reactor. We further examined micro-scale variation in terminal electron accepting processes and resulting C mineralization rates within re-packed soils. A major outcome of our research is the ability to quantitatively place the importance of aggregate-based heterogeneity in microbial redox processes and the resulting lack of oxygen on the rate of carbon mineralization. Collectively, our research shows that anaerobic microsites are prevalent in soils and are important regulators of soil carbon persistence, shifting microbial metabolism to less efficient anaerobic respiration and selectively protecting otherwise bioavailable, reduced organic compounds such as lipids and waxes from decomposition. Further, shifting from anaerobic to aerobic conditions leads to a 10-fold increase in volume-specific mineralization rate, illustrating the sensitivity of anaerobically protected carbon to disturbance. Vulnerability of anaerobically protected carbon to future climate or land use change thus constitutes a yet unrecognized soil carbon-climate feedback that should be incorporated into terrestrial ecosystem models.« less

Analysis of the Development of Available Soil Water Storage in the Nitra River Catchment

NASA Astrophysics Data System (ADS)

Tárník, Andrej; Leitmanová, Mária

2017-10-01

World is changing dramatically. Every sphere of our life is influenced by global climate changes, including agriculture sector. Rising air temperature and temporal variability of rainfall are crucial outcomes of climate changes for agricultural activities. Main impact of these outcomes on agriculture is the change of soil water amount. Soil water is an exclusive resource of water for plants. Changes of soil water storage are sensed very sensitively by farmers. Development of soil water storage was analysed in this paper. The Nitra River catchment is covered by nets of hydrological and meteorological stations of Department of Biometeorology and Hydrology, Slovak University of Agriculture in Nitra. Quantity of available soil water storage for plants was calculated every month in the years from 2013 to 2016. Calculations were done based on real measurements for soil horizon 0-30 cm. Ratio between a real available soil water storage and a potential available soil water storage was specified. Amount of potential available soil water storage was derived by retention curves of soil samples. Map of risk areas was created in GIS in pursuance of these calculations. We can see the negative trends of available soil water storage in years 2015 and 2016. Main addition of this paper is a selection of areas where soil moisture is a limiting factor of agriculture. In these areas, it is necessary to do the mitigation measures for sustainable development of agricultural activities.

Sagebrush wildfire effects on surface soil nutrient availability: A temporal and spatial study

USDA-ARS?s Scientific Manuscript database

Wildfires occurring in Artemisia (sagebrush) ecosystems can temporarily increase soil nutrient availability in surface soil. Less is known, however, on how soil nutrient availability changes over time and microsite location post-wildfire. In Oct., 2013 a wildfire approximately 30 km north of Reno, N...

[Effects of thiourea on pH and availability of metal ions in acid red soil].

PubMed

Yang, Bo; Wang, Wen; Zeng, Qing-Ru; Zhou, Xi-Hong

2014-03-01

Through the simulation research, the effects of application of thiourea and urea on pH and availability of metal ions in acid red soil were studied, and the results showed that after applying urea, the soil pH increased in the first experimental stage and then reduced gradually to a low level, however, decreased trends of soil pH values were inhibited by the application of thiourea, especially when the concentration of thiourea reached to 5.0 mmol x kg(-1) dry soil, the soil pH was stable at high level, which exceeded to 6.0. It proved that the application of thiourea could inhibit the soil acidification due to urea application. After applying urea with different concentrations of thiourea, the available contents of Zn and Al decreased with the increasing concentration of thiourea, nevertheless, when the concentration of thiourea reached to 5.0 mmol x kg(-1), the available content of Mn was stable at high level which was over 110 mg x kg(-1). In addition, the results showed a highly significant negative correlation between the soil pH and the available content of Cu, Zn and Al, but for Mn, no discipline was found between the soil pH and the availability after applying thiourea. Moreover, the soil pH became higher after applying urea with thiourea compared to add urea only, which led to the decreasing of available content of Al, and it was benefited for the control of the phytotoxic effect of Al. The available content of Mn in the soil not only depended on soil pH but also the content of thiourea due to its redox and complexing reaction with Mn.

[Correlation Among Soil Organic Carbon, Soil Inorganic Carbon and the Environmental Factors in a Typical Oasis in the Southern Edge of the Tarim Basin].

PubMed

Gong, Lu; Zhu, Mei-ling; Liu, Zeng-yuan; Zhang, Xue-ni; Xie, Li-na

2016-04-15

We analyzed the differentiation among the environmental factors and soil organic/inorganic carbon contents of irrigated desert soil, brown desert soil, saline soil and aeolian sandy soil by classical statistics methods, and studied the correlation between soil carbon contents and the environmental factor by redundancy analysis (RDA) in a typical oasis of Yutian in the southern edge of the Tarim Basin. The results showed that the average contents of soil organic carbon and soil inorganic carbon were 2.51 g · kg⁻¹ and 25.63 g · kg⁻¹ respectively. The soil organic carbon content of the irrigated desert soil was significantly higher than those of brown desert soil, saline soil and aeolian sandy soil, while the inorganic carbon content of aeolian sandy soil was significantly higher than those of other soil types. The soil moisture and nutrient content were the highest in the irrigated desert soil and the lowest in the aeolian sandy sail. All soil types had high degree of salinization except the irrigated desert soil. The RDA results showed that the impacts of environmental factors on soil carbon contents ranked in order of importance were total nitrogen > available phosphorus > soil moisture > ground water depth > available potassium > pH > total salt. The soil carbon contents correlated extremely significantly with total nitrogen, available phosphorus, soil moisture and ground water depth (P < 0.01), and it correlated significantly with available potassium and pH (P < 0.05). There was no significant correlation between soil carbon contents and other environmental factors (P > 0.05).

The role of blood flow distribution in the regulation of cerebral oxygen availability in fetal growth restriction.

PubMed

Luria, Oded; Bar, Jacob; Kovo, Michal; Malinger, Gustavo; Golan, Abraham; Barnea, Ofer

2012-04-01

Fetal growth restriction (FGR) elicits hemodynamic compensatory mechanisms in the fetal circulation. These mechanisms are complex and their effect on the cerebral oxygen availability is not fully understood. To quantify the contribution of each compensatory mechanism to the fetal cerebral oxygen availability, a mathematical model of the fetal circulation was developed. The model was based on cardiac-output distribution in the fetal circulation. The compensatory mechanisms of FGR were simulated and their effects on cerebral oxygen availability were analyzed. The mathematical analysis included the effects of cerebral vasodilation, placental resistance to blood flow, degree of blood shunting by the ductus venosus and the effect of maternal-originated placental insufficiency. The model indicated a unimodal dependency between placental blood flow and cerebral oxygen availability. Optimal cerebral oxygen availability was achieved when the placental blood flow was mildly reduced compared to the normal flow. This optimal ratio was found to increase as the hypoxic state of FGR worsens. The model indicated that cerebral oxygen availability is increasingly dependent on the cardiac output distribution as the fetus gains weight. Copyright © 2011 IPEM. Published by Elsevier Ltd. All rights reserved.

Mars Soil-Based Resource Processing and Planetary Protection

NASA Technical Reports Server (NTRS)

Sanders, G. B.; Mueller, R. P.

2015-01-01

The ability to extract and process resources at the site of exploration into products and services, commonly referred to as In Situ Resource Utilization (ISRU), can have significant benefits for robotic and human exploration missions. In particular, the ability to use in situ resources to make propellants, fuel cell reactants, and life support consumables has been shown in studies to significantly reduce mission mass, cost, and risk, while enhancing or enabling missions not possible without the incorporation of ISRU. In December 2007, NASA completed the Mars Human Design Reference Architecture (DRA) 5.0 study. For the first time in a large scale Mars architecture study, water from Mars soil was considered as a potential resource. At the time of the study, knowledge of water resources (their form, concentration, and distribution) was extremely limited. Also, due to lack of understanding of how to apply planetary protection rules and requirements to ISRU soil-based excavation and processing, an extremely conservative approach was incorporated where only the top several centimeters of ultraviolet (UV) radiated soil could be processed (assumed to be 3% water by mass). While results of the Mars DRA 5.0 study showed that combining atmosphere processing to make oxygen and methane with soil processing to extract water provided the lowest mission mass, atmosphere processing to convert carbon dioxide (CO2) into oxygen was baselined for the mission since it was the lowest power and risk option. With increased knowledge and further clarification of Mars planetary protection rules, and the recent release of the Mars Exploration Program Analysis Group (MEPAG) report on "Special Regions and the Human Exploration of Mars", it is time to reexamine potential water resources on Mars, options for soil processing to extract water, and the implications with respect to planetary protection and Special Regions on Mars.

Improving soil nutrient availability increases carbon rhizodeposition under maize and soybean in Mollisols.

PubMed

Qiao, Yunfa; Miao, Shujie; Han, Xiaozeng; Yue, Shuping; Tang, Caixian

2017-12-15

Rhizodeposited carbon (C) is an important source of soil organic C, and plays an important role in the C cycle in the soil-plant-atmosphere continuum. However, interactive effects of plant species and soil nutrient availability on C rhizodeposition remain unclear. This experiment examined the effect of soil nutrient availability on C rhizodeposition of C4 maize and C3 soybean with contrasting photosynthetic capacity. The soils (Mollisols) were collected from three treatments of no fertilizer (Control), inorganic fertilizer only (NPK), and NPK plus organic manure (NPKM) in a 24-year fertilization field trial. The plants were labelled with 13 C at the vegetative and reproductive stages. The 13 C abundance of shoots, roots and soil were quantified at 0, 7days after 13 C labelling, and at maturity. Increasing soil nutrient availability enhanced the C rhizodeposition due to the greater C fixation in shoots and distribution to roots and soil. The higher amount of averaged below-ground C allocated to soil resulted in greater specific rhizodeposited C from soybean than maize. Additional organic amendment further enhanced them. As a result, higher soil nutrient availability increased total soil organic C under both maize and soybean systems though there was no significant difference between the two crop systems. All these suggested that higher soil nutrient availability favors C rhizodeposition. Mean 80, 260 and 300kgfixedCha -1 were estimated to transfer into soil in the Control, NPK and NPKM treatments, respectively, during one growing season. Copyright © 2017 Elsevier B.V. All rights reserved.

Water: from the source to the treatment plan

NASA Astrophysics Data System (ADS)

Marquet, V.; Baude, I.

2012-04-01

As a biology and geology teacher, I have worked on water, from the source to the treatment plant, with pupils between 14 and 15 years old. Lesson 1. Introduction, the water in Vienna Aim: The pupils have to consider why the water is so important in Vienna (history, economy etc.) Activities: Brainstorming about where and why we use water every day and why the water is different in Vienna. Lesson 2. Soil, rock and water Aim: Permeability/ impermeability of the different layers of earth Activities: The pupils have measure the permeability and porosity of different stones: granite, clay, sand, carbonate and basalt. Lesson 3. Relationship between water's ion composition and the stone's mineralogy Aim: Each water source has the same ion composition as the soil where the water comes from. Activities: Comparison between the stone's mineralogy and ions in water. They had a diagram with the ions of granite, clay, sand, carbonate and basalt and the label of different water. They had to make hypotheses about the type of soil where the water came from. They verified this with a geology map of France and Austria. They have to make a profile of the area where the water comes from. They had to confirm or reject their hypothesis. Lesson 4 .Water-catchment and reservoir rocks Aim: Construction of a confined aquifer and artesian well Activities: With sand, clay and a basin, they have to model a confined aquifer and make an artesian well, using what they have learned in lesson 2. Lesson 5. Organic material breakdown and it's affect on the oxygen levels in an aquatic ecosystem Aim: Evaluate the relationship between oxygen levels and the amount of organic matter in an aquatic ecosystem. Explain the relationship between oxygen levels, bacteria and the breakdown of organic matter using an indicator solution. Activities: Put 5 ml of a different water sample in each tube with 20 drops of methylene blue. Observe the tubes after 1 month. Lesson 6. Visit to the biggest water treatment plant in Europe in Vienna Lesson 7 Water Quality Monitoring: Biochemical Oxygen Demand Aim: Measure the quantity of oxygen used by microorganisms in the oxidation of organic matter for different water; downstream and upstream of polluting refuse, after addition of glucose, milk or humus in the water. Activities: After dissolution of the different samples of water they measure the dissolved oxygen with the Winkler Method.

Vadose Zone Nitrate Transport Dynamics Resulting from Agricultural Groundwater Banking

NASA Astrophysics Data System (ADS)

Murphy, N. P.; McLaughlin, S.; Dahlke, H. E.

2017-12-01

In recent years, California's increased reliance on groundwater resources to meet agricultural and municipal demands has resulted in significant overdraft and water quality issues. Agricultural groundwater banking (AGB) has emerged as a promising groundwater replenishment opportunity in California; AGB is a form of managed aquifer recharge where farmland is flooded during the winter using excess surface water in order to recharge the underlying groundwater. Suitable farmland that is connected to water delivery systems is available for AGB throughout the Central Valley. However, questions remain how AGB could be implemented on fertilized agricultural fields such that nitrate leaching from the root zone is minimized. Here, we present results from field and soil column studies that investigate the transport dynamics of nitrogen in the root and deeper vadose zone during flooding events. We are specifically interested in estimating how timing and duration of flooding events affect percolation rates, leaching and nitrification/denitrification processes in three soil types within the Central Valley. Laboratory and field measurements include nitrogen (NO3-, NH4+, NO2-, N2O), redox potentials, total organic carbon, dissolved oxygen, moisture content and EC. Soil cores are collected in the field before and after recharge events up to a depth of 4m, while other sensors monitor field conditions continuously. Preliminary results from the three field sites show that significant portions of the applied floodwater (12-62 cm) infiltrated below the root zone: 96.1% (Delhi), 88.6% (Modesto) and 76.8% (Orland). Analysis of the soil cores indicate that 70% of the residual nitrate was flushed from the sandy soil, while the fine sandy loam showed only a 5% loss and in some cores even an increase in soil nitrate (in the upper 20cm). Column experiments support these trends and indicate that increases in soil nitrate in the upper root zone might be due to organic nitrogen mineralization and nitrification, facilitated by the added water. The next step will be to use field and laboratory data for the parameterization of the HP1 (Coupled Hydrus-1D and PHREEQC) model to develop an understanding of nitrogen transport in differing soil textures, and develop best management practices for future AGB projects.

Ultra-trace determination of Strontium-90 in environmental soil samples from Qatar by collision/reaction cell-inductively coupled plasma mass spectrometry (CRC-ICP-MS/MS)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Al-Meer, S. H.; Amr, M. A.; Helal, A.I.

Because of the very low level of {sup 90}Sr in the environmental soil samples and its determination by beta counting may take several weeks, we developed a procedure for ultra-trace determination of {sup 90}Sr using collision reaction cell-inductively coupled plasma tandem mass spectrometry (CRC-ICP-MS/MS, Agilent 8800). Soil samples were dried at 105 deg. C and then heated in a furnace at 550 deg. C to remove any organics present. 500 g of each soil samples were aliquoted into 2000 ml glass beakers. Each Soils samples were soaked in 2 ppm Sr solution carrier to allow determination of chemical yield. Themore » solid to liquid ratio was 1:1. Finally the soil samples were dried at 105 deg. C. Five hundred milliliters concentrated nitric acid and 250 ml hydrochloric acid volumes were added on 500 g soil samples. The samples were digested on hot plate at 80 deg. C to prevent spraying with continuous manual mixing. The leachate solution was separated. The solids were rinsed with 500 ml deionized water, warmed on a hot plate and the leachate plus previous leachate were filtered and the total volume was reduced to 500 ml by evaporation. Final leachate volume was transferred to a centrifuge tubes. The centrifuge tubes were centrifuged at 3,500 rpm for 10 min. The leachate was transferred to a 1 L beaker and heated on a hot plate to evaporate the leachate to dryness. The reside was re-dissolved in 100 ml of 2% HNO{sub 3} and reduced by evaporation to 10 mL. The solution was measured directly by CRC-ICP-MS/MS by setting the first quadruple analyzer to m/z 90 and introducing oxygen gas into the reaction cell for elimination isobar interference from zirconium-90. The method was validated by measurements of standard reference materials and applied on environmental soil samples. The overall time requirement for the measurement of strontium-90 by CRC-ICP-MS/MS is 2 days, significantly shorter than any radioanalytical protocol currently available. (authors)« less

Communities of arbuscular mycorrhizal fungi in the roots of Pyrus pyrifolia var. culta (Japanese pear) in orchards with variable amounts of soil-available phosphorus.

PubMed

Yoshimura, Yuko; Ido, Akifumi; Iwase, Koji; Matsumoto, Teruyuki; Yamato, Masahide

2013-01-01

We examined the colonization rate and communities of arbuscular mycorrhizal fungi (AMF) in the roots of Pyrus pyrifolia var. culta (Japanese pear) in orchards to investigate the effect of phosphorus (P) fertilization on AMF. Soil cores containing the roots of Japanese pear were collected from 13 orchards in Tottori Prefecture, Japan. Soil-available P in the examined orchards was 75.7 to 1,200 mg kg(-1), showing the extreme accumulation of soil P in many orchards. The AMF colonization rate was negatively correlated with soil-available P (P <0.01). AMF communities were examined on the basis of the partial fungal DNA sequences of the nuclear small-subunit ribosomal RNA gene (SSU rDNA) amplified by AMF-specific primers AML1 and AML2. The obtained AMF sequences were divided into 14 phylotypes, and the number of phylotypes (species richness) was also negatively correlated with soil-available P (P <0.05). It was also suggested that some AM fungi may be adapted to high soil-available P conditions. Redundancy analysis showed the significant effects of soil pH, available P in soil, and P content in leaves of P. pyrifolia var. culta trees on AMF distribution. These results suggested that the accumulation of soil-available P affected AMF communities in the roots of Japanese pear in the orchard environment.

Predicting potentially plant-available lead in contaminated residential sites.

PubMed

Andra, Syam S; Sarkar, Dibyendu; Saminathan, Sumathi K M; Datta, Rupali

2011-04-01

Lead (Pb)-based paints pose a serious health problem to people living in residential settings constructed prior to 1978. Children are at a greater risk to Pb exposure resulting from hand-to-mouth activity in Pb-contaminated residential soils. For soil Pb, the most environmentally friendly, potentially cheap, and visually unobtrusive in situ technology is phytoremediation. However, the limiting factor in a successful phytoremediation strategy is the availability of Pb for plant uptake. The purpose of this study was to establish a relationship between soil properties and the plant-available/exchangeable Pb fraction in the selected Pb-based paint-contaminated residential sites. We selected 20 such sites from two different locations (San Antonio, Texas and Baltimore, Maryland) with varying soil properties and total soil Pb concentrations ranging between 256 and 4,182 mg kg(-1). Despite higher Pb levels in these soils that exceeds US EPA permissible limit of 400 mg kg(-1), it is known that the plant-available Pb pools are significantly lower because of their sorption to soil components such as organic matter, Fe-Mn oxides, and clays, and their precipitation in the form of carbonates, hydroxides, and phosphates. Principal component analysis and hierarchical clustering showed that the potentially plant-available Pb fraction is controlled by soil pH in the case of acidic Baltimore soils, while soil organic matter plays a major role in alkaline San Antonio soils. Statistical models developed suggest that Pb is likely to be more available for plant uptake in Baltimore soils and a chelant-assisted phytoextraction strategy will be potentially necessary for San Antonio soils in mobilizing Pb from complexed pool to the plant-available pool. A thorough knowledge of site-specific factors is therefore essential in developing a suitable and successful phytoremediation model.

Predicting and mapping soil available water capacity in Korea.

PubMed

Hong, Suk Young; Minasny, Budiman; Han, Kyung Hwa; Kim, Yihyun; Lee, Kyungdo

2013-01-01

The knowledge on the spatial distribution of soil available water capacity at a regional or national extent is essential, as soil water capacity is a component of the water and energy balances in the terrestrial ecosystem. It controls the evapotranspiration rate, and has a major impact on climate. This paper demonstrates a protocol for mapping soil available water capacity in South Korea at a fine scale using data available from surveys. The procedures combined digital soil mapping technology with the available soil map of 1:25,000. We used the modal profile data from the Taxonomical Classification of Korean Soils. The data consist of profile description along with physical and chemical analysis for the modal profiles of the 380 soil series. However not all soil samples have measured bulk density and water content at -10 and -1500 kPa. Thus they need to be predicted using pedotransfer functions. Furthermore, water content at -10 kPa was measured using ground samples. Thus a correction factor is derived to take into account the effect of bulk density. Results showed that Andisols has the highest mean water storage capacity, followed by Entisols and Inceptisols which have loamy texture. The lowest water retention is Entisols which are dominated by sandy materials. Profile available water capacity to a depth of 1 m was calculated and mapped for Korea. The western part of the country shows higher available water capacity than the eastern part which is mountainous and has shallower soils. The highest water storage capacity soils are the Ultisols and Alfisols (mean of 206 and 205 mm, respectively). Validation of the maps showed promising results. The map produced can be used as an indication of soil physical quality of Korean soils.

Estimating phosphorus availability for microbial growth in an emerging landscape

USGS Publications Warehouse

Schmidt, S.K.; Cleveland, C.C.; Nemergut, D.R.; Reed, S.C.; King, A.J.; Sowell, P.

2011-01-01

Estimating phosphorus (P) availability is difficult—particularly in infertile soils such as those exposed after glacial recession—because standard P extraction methods may not mimic biological acquisition pathways. We developed an approach, based on microbial CO2 production kinetics and conserved carbon:phosphorus (C:P) ratios, to estimate the amount of P available for microbial growth in soils and compared this method to traditional, operationally-defined indicators of P availability. Along a primary succession gradient in the High Andes of Perú, P additions stimulated the growth-related (logistic) kinetics of glutamate mineralization in soils that had been deglaciated from 0 to 5 years suggesting that microbial growth was limited by soil P availability. We then used a logistic model to estimate the amount of C incorporated into biomass in P-limited soils, allowing us to estimate total microbial P uptake based on a conservative C:P ratio of 28:1 (mass:mass). Using this approach, we estimated that there was < 1 μg/g of microbial-available P in recently de-glaciated soils in both years of this study. These estimates fell well below estimates of available soil P obtained using traditional extraction procedures. Our results give both theoretical and practical insights into the kinetics of C and P utilization in young soils, as well as show changes in microbial P availability during early stages of soil development.

[Spatial heterogeneity and influencing factors of soil phosphorus concentration in a mid-subtropical Choerospondias axillaris deciduous broad-leaved forest, China.

PubMed

Hu, Rui Bin; Fang, Xi; Xiang, Wen Hua; Jiang, Fang; Lei, Pi Feng; Zhao, Li Juan; Zhu, Wen Juan; Deng, Xiang Wen

2016-03-01

In order to investigate spatial variations in soil phosphorus (P) concentration and the influencing factors, one permanent plot of 1 hm 2 was established and stand structure was surveyed in Choerospondias axillaries deciduous broadleaved forest in Dashanchong Forest Park in Changsha County, Hunan Province, China. Soil samples were collected with equidistant grid point sampling method and soil P concentration and its spatial variation were analyzed by using geo-statistics and geographical information system (GIS) techniques. The results showed that the variations of total P and available P concentrations in humus layer and in the soil profile at depth of 0-10, 10-20 and 20-30 cm were moderate and the available P showed higher variability in a specific soil layer compared with total P. Concentrations of total P and available P in soil decreased, while the variations increased with the increase in soil depth. The total P and available P showed high spatial autocorrelation, primarily resulted from the structural factors. The spatial heterogeneity of available P was stronger than that of total P, and the spatial autocorrelation ranges of total P and available P varied from 92.80 to 168.90 m and from 79.43 to 106.20 m in different soil layers, respectively. At the same soil depth, fractal dimensions of total P were higher than that of available P, with more complex spatial pattern, while available P showed stronger spatial correlation with stronger spatial structure. In humus layer and soil depths of 0-10, 10-20 and 20-30 cm, the spatial variation pattern of total P and available P concentrations showed an apparent belt-shaped and spot massive gradient change. The high value appeared at low elevation and valley position, and the low value appeared in the high elevation and ridge area. The total P and available P concentrations showed significantly negative correlation with elevation and litter, but the relationship with convexity, species, numbers and soil pH was not significant. The total P and available P exhibited significant positive correlations with soil organic carbon (SOC), total nitrogen concentration, indicating the leaching characteristics of soil P. Its spatial variability was affected by many interactive factors.

Precipitation v. River Discharge Controls on Water Availability to Riparian Trees in the Rhône River Delta

NASA Astrophysics Data System (ADS)

Singer, M. B.; Sargeant, C. I.; Vallet-Coulomb, C.; Evans, C.; Bates, C. R.

2014-12-01

Water availability to riparian trees in lowlands is controlled through precipitation and its infiltration into floodplain soils, and through river discharge additions to the hyporheic water table. The relative contributions of both water sources to the root zone within river floodplains vary through time, depending on climatic fluctuations. There is currently limited understanding of how climatic fluctuations are expressed at local scales, especially in 'critical zone' hydrology, which is fundamental to the health and sustainability of riparian forest ecosystems. This knowledge is particularly important in water-stressed Mediterranean climate systems, considering climatic trends and projections toward hotter and drier growing seasons, which have the potential to dramatically reduce water availability to riparian forests. Our aim is to identify and quantify the relative contributions of hyporheic (discharge) water v. infiltrated precipitation to water uptake by riparian Mediterranean trees for several distinct hydrologic years, selected to isolate contrasts in water availability from these sources. Our approach includes isotopic analyses of water and tree-ring cellulose, mechanistic modeling of water uptake and wood production, and physically based modeling of subsurface hydrology. We utilize an extensive database of oxygen isotope (δ18O) measurements in surface water and precipitation alongside recent measurements of δ18O in groundwater and soil water and in tree-ring cellulose. We use a mechanistic model to back-calculate source water δ18O based on δ18O in cellulose and climate data. Finally, we test our results via 1-D hydrologic modeling of precipitation infiltration and water table rise and fall. These steps enable us to interpret hydrologic cycle variability within the 'critical zone' and their potential impact on riparian trees.

Resource Legacies of Organic and Conventional Management Differentiate Soil Microbial Carbon Use

PubMed Central

Arcand, Melissa M.; Levy-Booth, David J.; Helgason, Bobbi L.

2017-01-01

Long-term contrasts in agricultural management can shift soil resource availability with potential consequences to microbial carbon (C) use efficiency (CUE) and the fate of C in soils. Isothermal calorimetry was combined with 13C-labeled glucose stable isotope probing (SIP) of 16S rRNA genes to test the hypothesis that organically managed soils would support microbial communities with greater thermodynamic efficiency compared to conventional soils due to a legacy of lower resource availability and a resultant shift toward communities supportive of more oligotrophic taxa. Resource availability was greater in conventionally managed soils, with 3.5 times higher available phosphorus, 5% more nitrate, and 36% more dissolved organic C. The two management systems harbored distinct glucose-utilizing populations of Proteobacteria and Actinobacteria, with a higher Proteobacteria:Actinobacteria ratio (2.4 vs. 0.7) in conventional soils. Organically managed soils also harbored notable activity of Firmicutes. Thermodynamic efficiency indices were similar between soils, indicating that glucose was metabolized at similar energetic cost. However, differentially abundant glucose utilizers in organically managed soils were positively correlated with soil organic matter (SOM) priming and negatively correlated to soil nutrient and carbon availability, respiration, and heat production. These correlation patterns were strongly reversed in the conventionally managed soils indicating clear differentiation of microbial functioning related to soil resource availability. Fresh C addition caused proportionally more priming of SOM decomposition (57 vs. 51%) in organically managed soils likely due to mineralization of organic nutrients to satisfy microbial demands during glucose utilization in these more resource deprived soils. The additional heat released from SOM oxidation may explain the similar community level thermodynamic efficiencies between management systems. Restoring fertility to soils with a legacy of nutrient limitation requires a balanced supply of both nutrients and energy to protect stable SOM from microbial degradation. These results highlight the need to consider managing C for the energy it provides to ıcritical biological processes that underpin soil health. PMID:29230199

Oxygen and iron production by electrolytic smelting of lunar soil

NASA Technical Reports Server (NTRS)

Colson, R. O.; Haskin, L. A.

1991-01-01

Oxygen, present in abundance in nearly all lunar materials, can theoretically be extracted by molten silicate electrolysis from any known lunar rock. Derivation of oxygen by this method has been amply demonstrated experimentally in silicate melts of a variety of compositions. This work can be divided into three categories: (1) measurement of solubilities of metals (atomic) in silicate melts; (2) electrolysis experiments under various conditions of temperature, container material, electrode configuration, current density, melt composition, and sample mass (100 to 2000 mg) measuring energy required and character of resulting products; and (3) theoretical assessment of compositional requirements for steady state operations of an electrolysis cell.

Non-destructive estimates of soil carbonic anhydrase activity and associated soil water oxygen isotope composition

NASA Astrophysics Data System (ADS)

Jones, Sam P.; Ogée, Jérôme; Sauze, Joana; Wohl, Steven; Saavedra, Noelia; Fernández-Prado, Noelia; Maire, Juliette; Launois, Thomas; Bosc, Alexandre; Wingate, Lisa

2017-12-01

The contribution of photosynthesis and soil respiration to net land-atmosphere carbon dioxide (CO2) exchange can be estimated based on the differential influence of leaves and soils on budgets of the oxygen isotope composition (δ18O) of atmospheric CO2. To do so, the activity of carbonic anhydrases (CAs), a group of enzymes that catalyse the hydration of CO2 in soils and plants, needs to be understood. Measurements of soil CA activity typically involve the inversion of models describing the δ18O of CO2 fluxes to solve for the apparent, potentially catalysed, rate of CO2 hydration. This requires information about the δ18O of CO2 in isotopic equilibrium with soil water, typically obtained from destructive, depth-resolved sampling and extraction of soil water. In doing so, an assumption is made about the soil water pool that CO2 interacts with, which may bias estimates of CA activity if incorrect. Furthermore, this can represent a significant challenge in data collection given the potential for spatial and temporal variability in the δ18O of soil water and limited a priori information with respect to the appropriate sampling resolution and depth. We investigated whether we could circumvent this requirement by inferring the rate of CO2 hydration and the δ18O of soil water from the relationship between the δ18O of CO2 fluxes and the δ18O of CO2 at the soil surface measured at different ambient CO2 conditions. This approach was tested through laboratory incubations of air-dried soils that were re-wetted with three waters of different δ18O. Gas exchange measurements were made on these soils to estimate the rate of hydration and the δ18O of soil water, followed by soil water extraction to allow for comparison. Estimated rates of CO2 hydration were 6.8-14.6 times greater than the theoretical uncatalysed rate of hydration, indicating that CA were active in these soils. Importantly, these estimates were not significantly different among water treatments, suggesting that this represents a robust approach to assay the activity of CA in soil. As expected, estimates of the δ18O of the soil water that equilibrates with CO2 varied in response to alteration to the δ18O of soil water. However, these estimates were consistently more negative than the composition of the soil water extracted by cryogenic vacuum distillation at the end of the gas measurements with differences of up to -3.94 ‰ VSMOW-SLAP. These offsets suggest that, at least at lower water contents, CO2-H2O isotope equilibration primarily occurs with water pools that are bound to particle surfaces and are depleted in 18O compared to bulk soil water.

Nature based solutions to mitigate soil sealing in urban areas: Results from a 4-year study comparing permeable, porous, and impermeable pavements.

PubMed

Fini, A; Frangi, P; Mori, J; Donzelli, D; Ferrini, F

2017-07-01

Soil sealing is one of the most pervasive forms of soil degradation that follows urbanization and, despite innovative pavements (i.e. pervious) are being installed in urban areas to mitigate it, there is little research on the effects of pervious pavements on soil water and carbon cycle and on the physiology of urban trees. The aim of this 4-year experiment was to assess the effects of three pavements, differing in permeability to water and gases, on some soil physical parameters, and on growth and physiology of newly planted Celtis australis and Fraxinus ornus. Treatments were: 1) impermeable pavement (asphalt on concrete sub-base); 2) permeable pavement (pavers on crushed rock sub-base); 3) porous design (porous pavement on crushed rock sub-base); 4) control (unpaved soil, kept free of weed by chemical control). Soil (temperature, moisture, oxygen content and CO 2 efflux) and plant (above- and below-ground growth, leaf gas exchange, chlorophyll fluorescence, water relations) parameters were measured. All types of pavements altered the water cycle compared to unpaved soil plots, but this disturbance was less intense in porous pavements than in other soil cover types. Porous pavements allowed both higher infiltration and evaporation of water than both pavers and asphalt. Reduction of evaporative cooling from soil paved with permeable and impermeable pavements contributed to significant soil warming: at 20cm depth, soils under concrete pavers and asphalt were 4 and 5°C warmer than soil covered by porous pavements and unpaved soils, respectively. Thus, enhancing evaporation from paved soil by the use of porous pavements may contribute to mitigating urban heat islands. CO 2 greatly accumulated under impermeable and permeable pavements, but not under porous pavements, which showed CO 2 efflux rates similar to control. Soil oxygen slightly decreased only beneath asphalt. Growth of newly planted C. australis and F. ornus was little affected by pavement type. Tree transpiration rapidly depleted soil moisture compared to the not-planted scenario, but soil moisture did not fall below wilting point (particularly in the deeper soil layers, i.e. 40-50cm) in any treatment. While C. australis showed similar leaf gas exchange and water relations in all treatments, F. ornus showed a depression in CO 2 assimilation and slight signs of stress of the photosynthetic apparatus when planted in soil covered with impermeable pavement. The effects of soil cover with different materials on tree growth and physiology were little, because newly planted trees have most of their roots still confined in the unpaved planting pit. Still, the reduction of soil sealing around the planting pit triggered the establishment of sensitive species such as ash. Further research is needed to assess the effects of different pavement types on established, larger trees. Copyright © 2017 Elsevier Inc. All rights reserved.

Effects of atmospheric ageing under different temperatures on surface properties of sludge-derived biochar and metal/metalloid stabilization.

PubMed

Wang, Hong; Feng, Mingyu; Zhou, Fengsa; Huang, Xinchen; Tsang, Daniel C W; Zhang, Weihua

2017-10-01

Ageing is a common phenomenon during biochar storage and its soil application. In this study, we exposed sludge-derived biochar (SDBC) in the air under 4 °C, 22 °C, and 45 °C for 30-120 d to imitate the ageing process after SDBC production. The aged SDBC was characterized and its sorption capacities for Pb(II), Cr(V) and As(III) were compared with the fresh ones in batch sorption experiments. The results showed an increase in acidity, cation exchange capacity, and carboxyl groups of SDBC surface, but a decrease in alkalinity and Fe(III) species during ageing, indicating the oxidation. In addition, ageing for more than 30 d was found to favor the Pb(II) and As(III) sorption, because of higher density of available oxygen-containing groups. The Cr(VI) sorption was found to be compromised by the ageing, because some reducing agents for Cr(VI) reduction was consumed there. Higher temperatures accelerated the above-mentioned ageing effect. Yet, when the SDBC was applied in the heavy-metal contaminated soil, its performance would be affected by both ageing of SDBC itself as well as long-term interactions among soil components, such as colloids and solution, heavy metals, and SDBC, which require further investigation. Copyright © 2017 Elsevier Ltd. All rights reserved.

Dynamic and inertial controls on forest carbon-water relations

NASA Astrophysics Data System (ADS)

Maxwell, T.; Silva, L.; Horwath, W. R.

2017-12-01

This study fuses theory, empirical measurements, and statistical models to evaluate multiple processes controlling coupled carbon-water cycles in forest ecosystems. A series of latitudinal and altitudinal transects across the California Sierra Nevada was used to study the effects of climatic and edaphic gradients on intrinsic water-use efficiency (iWUE) - CO2 fixed per unit of water lost via transpiration - of nine dominant trees species. Transfer functions were determined between leaf, litter, and soil organic matter stable isotope ratios of carbon, oxygen, and nitrogen, revealing causal links between the physiological performance of tree species and stand-level estimations of productivity and water balance. Our results show that species iWUE is governed both by leaf traits (24% of the variation) and edaphic properties, such as parent material and soil development (3% and 12% of the variation, respectively). We show that soil properties combined with isotopic indicators can be used to explain constraints over iWUE by regulating water and nutrient availability across elevation gradients. Based on observed compositional shifts likely driven by changing climates in the region, encroachment of broad leaf trees could lead to an 80% increase in water loss via transpiration for each unit of CO2 fixed in Sierra mixed conifer zones. A combination of field-based, laboratory, and remote sensed data provide a useful framework for differentiating the effect of multiple controls of carbon and water cycles in temperate forest ecosystems.

Accumulation, availability, and uptake of heavy metals in a red soil after 22-year fertilization and cropping.

PubMed

Zhou, Shiwei; Liu, Jing; Xu, Minggang; Lv, Jialong; Sun, Nan

2015-10-01

Fertilization is important to increase crop yields, but long-term application of fertilizers probably aggravated the risk of heavy metals in acidic soils. In this study, the effect of 22-year fertilization and cropping on accumulation, availability, and uptake of heavy metals in red soil was investigated. The results showed that pig manure promoted significantly cadmium (Cd) accumulation (average 1.1 mg kg(-1)), nearly three times higher than national soil standards and, thus, increased metal availability. But the enrichment of heavy metals decreased remarkably by 50.5 % under manure fertilization, compared with CK (control without fertilization). On the contrary, chemical fertilizers increased greatly lead (Pb) availability and Cd activity; in particular, exceeding 85 % of soil Cd became available to plant under N (nitrogen) treatment during 9-16 years of fertilization, which correspondingly increased their enrichment by 29.5 %. Long-term application of chemical fertilizers caused soil acidification and manure fertilization led to the increase in soil pH, soil organic matter (SOM), and available phosphorus (Olsen P), which influenced strongly metal behavior in red soil, and their effect had extended to deeper soil layer (20∼40 cm). It is advisable to increase application of manure alone with low content of heavy metals or in combination with chemical fertilizers to acidic soils in order to reduce toxic metal risk.

Loss of oxygen, silicon, sulfur, and potassium from the lunar regolith

NASA Technical Reports Server (NTRS)

Clayton, R. N.; Mayeda, T. K.; Hurd, J. M.

1974-01-01

The processes of formation and maturation of lunar soils lead to enrichments in the heavy stable isotopes of oxygen, silicon, sulfur, and potassium. The isotopic enrichment implies substantial losses of these elements from the moon. Vaporization by micrometeorite impact and by ion sputtering have removed at least 1% of the mass of the regolith. The losses of sulfur and potassium amount to at least 20-30% of their original abundance in the regolith.

β-Aminobutyric acid increases abscisic acid accumulation and desiccation tolerance and decreases water use but fails to improve grain yield in two spring wheat cultivars under soil drying.

PubMed

Du, Yan-Lei; Wang, Zhen-Yu; Fan, Jing-Wei; Turner, Neil C; Wang, Tao; Li, Feng-Min

2012-08-01

A pot experiment was conducted to investigate the effect of the non-protein amino acid, β-aminobutyric acid (BABA), on the homeostasis between reactive oxygen species (ROS) and antioxidant defence during progressive soil drying, and its relationship with the accumulation of abscisic acid (ABA), water use, grain yield, and desiccation tolerance in two spring wheat (Triticum aestivum L.) cultivars released in different decades and with different yields under drought. Drenching the soil with 100 µM BABA increased drought-induced ABA production, leading to a decrease in the lethal leaf water potential (Ψ) used to measure desiccation tolerance, decreased water use, and increased water use efficiency for grain (WUEG) under moderate water stress. In addition, at severe water stress levels, drenching the soil with BABA reduced ROS production, increased antioxidant enzyme activity, and reduced the oxidative damage to lipid membranes. The data suggest that the addition of BABA triggers ABA accumulation that acts as a non-hydraulic root signal, thereby closing stomata, and reducing water use at moderate stress levels, and also reduces the production of ROS and increases the antioxidant defence enzymes at severe stress levels, thus increasing the desiccation tolerance. However, BABA treatment had no effect on grain yield of wheat when water availability was limited. The results suggest that there are ways of effectively priming the pre-existing defence pathways, in addition to genetic means, to improve the desiccation tolerance and WUEG of wheat.

[Study on nutrient and salinity in soil covered with different vegetations in Shuangtaizi estuarine wetlands].

PubMed

Song, Xiao-Lin; Lü, Xian-Guo; Zhang, Zhong-Sheng; Chen, Zhi-Ke; Liu, Zheng-Mao

2011-09-01

Nutrient elements and salinity in soil covered by different vegetations including Phragmites australis (Clay.) Trin., Typha orientalis Presl., Puccinellia distans Parl, and Suaeda salsa in Shuangtaizi estuarine wetlands were investigated to study their distribution characteristics and to reveal the nutrient element variation during the vegetation succession processes. Results indicated that total potassium, total phosphorus and salinity were different significantly in soil between different plant communities while available phosphorus, total nitrogen, available nitrogen, available potassium, total sulfur, iron and soil organic carbon were different insignificantly. Correlation analysis suggested that soil organic carbon were related significantly to total nitrogen, available phosphorus, available potassium, which implied that decomposition of plant litter might be the mail source of soil nitrogen and available nutrient. Salinity was significantly related to total phosphorus and iron in soil. In Shuangtaizi estuarine wetland soil, ratios of carbon to nitrogen (R(C/N)) was in the range of 12.21-26.33 and the average value was 18.21, which was higher than 12.0. It indicated that soil organic carbon in Shuangtaizi estuarine mainly came from land but not ocean and plants contributed the most of soil organic matters. There was no significant difference in R(C/N) between soil from the four plant communities (F = 1.890, p = 0.151). R(C/N) was related significantly to sol salinity (r = 0.346 3, p = 0.035 8) and was increasing with soil salinity.

Do biochars influence the availability and human oral bioaccessibility of Cd, Pb, and Zn in a contaminated slightly alkaline soil?

PubMed

Janus, Adeline; Waterlot, Christophe; Heymans, Sophie; Deboffe, Christophe; Douay, Francis; Pelfrêne, Aurélie

2018-03-14

Different remediation techniques have been used to restore metal-contaminated sites, including stabilizing metals by adding amendments to the soils. This study experimented three biochars, made from wood and miscanthus, cultivated on contaminated and uncontaminated soils, used as amendments at a 2% application rate on a metal-contaminated soil for 9 months in laboratory-controlled conditions. The objective was to evaluate whether biochars were able to decrease the availability and human oral bioaccessibility of metals in an alkaline soil. To meet this goal, the modifications of the soil's physicochemical parameters, metal distribution in soil, and human bioaccessibility were evaluated at different sampling times. The results showed that biochar application to the alkaline soil did not always decrease the soil metal availability, which challenges the value of using biochars in already slightly alkaline soils at a low application rate. However, differences in efficiency between the three biochars tested were highlighted. The biochar produced with miscanthus cultivated on uncontaminated soil led to higher soil metal bioaccessibility. Moreover, because of the absence of any increase in soil metal availability with the biochar produced from biomass cultivated on contaminated soil, the use of such biochars can be recommended for the remediation of contaminated soil.

[Soil Olsen-P content changing trend and its relationship with phosphorus surplus and crop yield under long-term fertilization in loessial soil region on the Loess Plateau, China].

PubMed

E, Sheng Zhe; Yang, Zhi Qi; Zeng, Xi Bai; Wang, Ya Nan; Luo, Zhao Xia; Yuan, Jin Hua; Che, Zong Xian

2017-11-01

The changing trend of soil available phosphorus (Olsen-P) content in soil and its relationship with soil phosphorus surplus and crop yield are fundamental when making appropriate phosphate fertilizer recommendations. In this paper, the influences of long-term fertilization on crops phosphorus uptake, soil phosphorus surplus, changing trend of soil available phosphorus content and relationships of soil available phosphorus content with soil phosphorus surplus and crop yield were investigated through 34 years (1981-2015) long-term trial in loessial soil region on the Loess Plateau. The experiment had a completely-randomized-block split-plot design in triplicate. Two main-plot treatments were no farmyard manure and farmyard manure (M), and four subplot treatments were CK (no fertilizer), N (application of chemical fertilizer N), NP (application of chemical fertilizer NP) and NPK (balanced application of chemical fertilizer NPK), respectively. The results showed that fertilization treatments and crop types significantly influenced uptake amount of phosphorus and soil phosphorus surplus. Averaged over time from 1981 to 2015, wheat mean phosphorus uptake amounts of CK, N, NP, NPK, M, MN, MNP and MNPK were 8.63, 10.64, 16.22, 16.21, 16.25, 17.83, 20.39 and 20.27 kg·hm -2 , while rape phosphorus uptakeamounts of eight treatments were 4.40, 8.38, 15.08, 15.71, 10.52, 11.23, 17.96 and 17.66 kg·hm -2 , respectively. The surplus amount of soil phosphorus significantly correlated with the amount of phosphorus applied to soil. When soil phosphorus surplus amount equal zero, wheat and rape phosphorus input amounts were 10.47 kg·hm -2 and 6.97 kg·hm -2 , respectively. Soil phosphorus surplus amount significantly influenced the changing trend of available phosphorus content in soil. CK and N treatments had no phosphorus input, and soil available phosphorus content exhibited a declining trend, annually decreased by 0.16 mg·kg -1 and 0.15 mg·kg -1 , respectively. In contrast, NP, NPK, M, MN, MNP and MNPK six treatments were applied with phosphate fertilizer every years, and available phosphorus content gradually increased along with the duration of trial, with annual increase by 0.02-0.33 mg·kg -1 . Soil available phosphorus content significantly correlated with phosphorus accumulative surplus amount, and the linear models were y=0.012x+9.33 and y=0.009x+11.72 in manure and no manure treatments, respectively. In no manure treatments, wheat yields significantly positively correlated with soil available phosphorus content, however, in manure treatments, their relationships did not reach a significant level. The relationship of wheat grain yield with available phosphorus content could be significantly fitted by piecewise linear model, and available phosphorus agronomy threshold of wheat was 14.99 mg·kg -1 . Rape grain yield also increased with increasing soil available phosphorus content, but the relationship was not significant. This indicated when soil available P content is higher than 14.99 mg·kg -1 , application of phosphate fertili-zer should be reduced or even avoided for planting wheat in loessial soil region on the Loess Plateau.

Fate of the antibiotic sulfadiazine in natural soils: Experimental and numerical investigations.

PubMed

Engelhardt, Irina; Sittig, Stephan; Šimůnek, Jirka; Groeneweg, Joost; Pütz, Thomas; Vereecken, Harry

2015-01-01

Based on small-scale laboratory and field-scale lysimeter experiments, the sorption and biodegradation of sulfonamide sulfadiazine (SDZ) were investigated in unsaturated sandy and silty-clay soils. Sorption and biodegradation were low in the laboratory, while the highest leaching rates were observed when SDZ was mixed with manure. The leaching rate decreased when SDZ was mixed with pure water, and was smallest with the highest SDZ concentrations. In the laboratory, three transformation products (TPs) developed after an initial lag phase. However, the amount of TPs was different for different mixing-scenarios. The TP 2-aminopyrimidine was not observed in the laboratory, but was the most prevalent TP at the field scale. Sorption was within the same range at the laboratory and field scales. However, distinctive differences occurred with respect to biodegradation, which was higher in the field lysimeters than at the laboratory scale. While the silty-clay soil favored sorption of SDZ, the sandy, and thus highly permeable, soil was characterized by short half-lives and thus a quick biodegradation of SDZ. For 2-aminopyrimidine, half-lives of only a few days were observed. Increased field-scale biodegradation in the sandy soil resulted from a higher water and air permeability that enhanced oxygen transport and limited oxygen depletion. Furthermore, low pH was more important than the organic matter and clay content for increasing the biodegradation of SDZ. A numerical analysis of breakthrough curves of bromide, SDZ, and its TPs showed that preferential flow pathways strongly affected the solute transport within shallow parts of the soil profile at the field scale. However, this effect was reduced in deeper parts of the soil profile. Due to high field-scale biodegradation in several layers of both soils, neither SDZ nor 2-aminopyrimidine was detected in the discharge of the lysimeter at a depth of 1m. Synthetic 50 year long simulations, which considered the application of manure with SDZ for general agricultural practices in Germany and humid climate conditions, showed that the concentration of SDZ decreased below 0.1 μg/L in both soils below the depth of 50 cm. Copyright © 2015 Elsevier B.V. All rights reserved.

Fate of the antibiotic sulfadiazine in natural soils: Experimental and numerical investigations

NASA Astrophysics Data System (ADS)

Engelhardt, Irina; Sittig, Stephan; Šimůnek, Jirka; Groeneweg, Joost; Pütz, Thomas; Vereecken, Harry

2015-06-01

Based on small-scale laboratory and field-scale lysimeter experiments, the sorption and biodegradation of sulfonamide sulfadiazine (SDZ) were investigated in unsaturated sandy and silty-clay soils. Sorption and biodegradation were low in the laboratory, while the highest leaching rates were observed when SDZ was mixed with manure. The leaching rate decreased when SDZ was mixed with pure water, and was smallest with the highest SDZ concentrations. In the laboratory, three transformation products (TPs) developed after an initial lag phase. However, the amount of TPs was different for different mixing-scenarios. The TP 2-aminopyrimidine was not observed in the laboratory, but was the most prevalent TP at the field scale. Sorption was within the same range at the laboratory and field scales. However, distinctive differences occurred with respect to biodegradation, which was higher in the field lysimeters than at the laboratory scale. While the silty-clay soil favored sorption of SDZ, the sandy, and thus highly permeable, soil was characterized by short half-lives and thus a quick biodegradation of SDZ. For 2-aminopyrimidine, half-lives of only a few days were observed. Increased field-scale biodegradation in the sandy soil resulted from a higher water and air permeability that enhanced oxygen transport and limited oxygen depletion. Furthermore, low pH was more important than the organic matter and clay content for increasing the biodegradation of SDZ. A numerical analysis of breakthrough curves of bromide, SDZ, and its TPs showed that preferential flow pathways strongly affected the solute transport within shallow parts of the soil profile at the field scale. However, this effect was reduced in deeper parts of the soil profile. Due to high field-scale biodegradation in several layers of both soils, neither SDZ nor 2-aminopyrimidine was detected in the discharge of the lysimeter at a depth of 1 m. Synthetic 50 year long simulations, which considered the application of manure with SDZ for general agricultural practices in Germany and humid climate conditions, showed that the concentration of SDZ decreased below 0.1 μg/L in both soils below the depth of 50 cm.

Space agriculture in micro- and hypo-gravity: A comparative study of soil hydraulics and biogeochemistry in a cropping unit on Earth, Mars, the Moon and the space station

NASA Astrophysics Data System (ADS)

Maggi, Federico; Pallud, Céline

2010-12-01

Increasing interest is developing towards soil-based agriculture as a long-term bioregenerative life support during space and planetary explorations. Contrary to hydroponics and aeroponics, soil-based cropping would offer an effective approach to sustain food and oxygen production, decompose organic wastes, sequester carbon dioxide, and filter water. However, the hydraulics and biogeochemical functioning of soil systems exposed to gravities lower than the Earth's are still unknown. Since gravity is crucial in driving water flow, hypogravity will affect nutrient and oxygen transport in the liquid and gaseous phases, and could lead to suffocation of microorganisms and roots, and emissions of toxic gases. A highly mechanistic model coupling soil hydraulics and nutrient biogeochemistry previously tested on soils on Earth ( g=9.806 m s -2) is used to highlight the effects of gravity on the functioning of cropping units on Mars (0.38 g), the Moon (0.16 g), and in the international space station (ISS, nearly 0 g). For each scenario, we have compared the net leaching of water, the leaching of NH 3, NH 4+, NO 2- and NO 3- solutes, the emissions of NH 3, CO 2, N 2O, NO and N 2 gases, the concentrations profiles of O 2, CO 2 and dissolved organic carbon (DOC) in soil, the pH, and the dynamics of various microbial functional groups within the root zone against the same control variables in the soil under terrestrial gravity. The response of the soil ecodynamics was relatively linear; gravitational accelerations lower than the Earth's resulted in 90-100% lower water leaching rates, 95-100% lower nutrient leaching rates, and lower emissions of NH 3 and NO gases (80-95% and 30-40%, respectively). Lower N loss through leaching resulted in 60-100% higher concentration of the microbial biomass, but did not alter the vertical stratification of the microbial functional groups with respect to the stratification on Earth. However, the higher biomass concentration produced higher emissions of N 2O, N 2, and CO 2 gases (80%, 200% and 40%, respectively).

Mapping of available heavy metals in Catamarca (Argentina)

NASA Astrophysics Data System (ADS)

Roca, N.; Pazos, M. S.; Bech, J.

2009-04-01

Copper, iron, manganese and zinc are four essential elements for plant growth. Mapping heavy metal migration and distribution in soils is a preliminary step in assessing heavy metal availability in soils. However, data of qualitative and quantitative trace elements composition of soils of Argentina are scarce. Despite the small amounts required by plants, agricultural soils are usually deficient in one or more micronutrients, therefore, their concentration in plant tissues falls below the levels that allow optimal growth. Soil nature plays a fundamental role in the availability of micronutrients and their behaviour at a soil-plant level. The aim of this study is to determine the plant availability and areas of deficiency in agricultural soils with risk of salinization. The presented maps have been elaborated on the basis of the information provided by the monochromatic aerial photographs, scale 1:7000 and projected using the topographic information of the National Topographic Maps. Soils were sampled according to the spatial variation of soil types and land use. Sampling points were geo-referenced. Soil samples were analyzed at the laboratory for complete physicochemical and mineralogical characteristics. The percentage of organic matter is the determining factor in the presence and distribution of the available metals in the soils of the studied area, being the top horizon the one of greatest accumulation. CuDTPA, FeDPTA and MnDPTA are mobile within the profile, whereas ZnDPTA remains adsorbed without vertical displacement. ZnDTPA is the only available metal which also shows differences due to soil salinity and textural classes. However, soil geochemical conditions imply low extractability and a certain difficulty for micronutrient absorption by plants.

Effect of polluted water on soil and plant contamination by heavy metals in El-Mahla El-Kobra, Egypt

NASA Astrophysics Data System (ADS)

Kasem Mahmoud, Esawy; Ghoneim, Adel Mohamed

2016-04-01

The discharge of untreated waste water in Zefta drain and drain no. 5 is becoming a problem for many farmers in the El-Mahla El-Kobra area, Egypt. The discharged water contains high levels of contaminants considered hazardous to the ecosystem. Some plants, soil, water, and sediment samples were collected from the El-Mahla El-Kobra area to evaluate the contamination by heavy metals. The results showed that the heavy metals, pH, sodium adsorption ratio (SAR), biochemical oxygen demand (BOD), and chemical oxygen demand (COD) in the water of Zefta drain and drain no. 5 exceeded permissible limits for irrigation. In rice and maize shoots grown in soils irrigated by contaminated water from Zefta drain and drain no. 5, the bioaccumulation factors for Cd, Pb, Zn, Cu, and Mn were higher than 1.0. The heavy metals content of irrigated soils from Zefta drain and drain no. 5 exceeded the upper limit of background heavy metals. In this study, the mean contaminant factor values of the drain no. 5 sediments revealed that Zn, Mn, Cu, Cd, Pb, and Ni > 6, indicating very high contamination. The bioaccumulation coefficient values of Cynodon dactylon, Phragmites australis, and Typha domingensis aquatic plants growing in Zefta drain are high. These species can be considered as hyperaccumulators for the decontamination of contaminated water.

Oxygen and nitrogen isotope effects duing nitrification and denitrification occuring in Midwesern soils

NASA Astrophysics Data System (ADS)

Michalski, G. M.; Wilkens, B.; Sanchez, A. V.; Yount, J.

2017-12-01

The processes of nitrification and denitrification are key steps in the biogeochemical cycling of N and are a main control on ecosystem productivity. These processes are ephemeral and often difficult to assess across wide spatial and temporal scales. Natural abundance stable isotopes are a way of potentially assessing these two processes across multiple scales. We have conducted incubation experiments to assess the N and O isotope effects occurring during denitrification in soils typical of the Midwestern United States. Nitrification was examined by incubating soils amended with ammonium (with a known δ15N) mixed with H2O and O2 that had different δ18O values and then measured the δ15N and δ18O of the product nitrate. The fraction of nitrate oxygen arising from H2O and O2 was determined along with the N and O kinetic isotope effect (KIE). For denitrification, nitrate with a known δ15N, δ17O, and δ18O, was incubated in anaerobic soils from 12-48 hours. The residual nitrate was analyzed for isotope change and the KIE for O and N as well as exchange with H2O was determined. These data can be useful for interpreting nitrate isotopes in agricultural fields as a way off assessing nitrification and denitrification is agricultural ecosystems such as the IML-CZO.

[Long-term effects of tillage methods on heavy metal accumulation and availability in purple paddy soil].

PubMed

Chang, Tong-Ju; Cui, Xiao-Qiang; Ruan, Zhen; Zhao, Xiu-Lan

2014-06-01

A long-term experiment, conducted at Southwest University since 1990, was used to evaluate the effect of tillage methods on the total and available contents of heavy metals (Fe, Mn, Cu, Zn, Pb, Cd) in the profile of purple paddy soil and the contents of those metals in root, stem leaf and brown rice. The experiment included five tillage methods: conventional tillage, paddy-upland rotation, no-tillage and fallow in winter, ridge-no-tillage and compartments-no-tillage. The results showed that the total concentrations of Fe, Cu, Zn, Pb and Cd in the soil profile had no significant differences among five treatments, but it was found that total Mn has a significant decline in 0-20 cm under conventional tillage, paddy-upland rotation and no-tillage and fallow in winter compared with ridge-no-tillage and compartments-no-tillage. The availability of Fe, Cu, Zn, Pb and Cd decreased with the increase of soil depth in all treatments, but the availability of Mn was found to be the highest in the 20-40 cm layers except those in the paddy-upland rotation. In the ploughed layer, the contents of available Fe, Mn was the highest in paddy-upland rotation, while the contents of available Zn and Pb was the highest in conventional tillage, but tillage treatments had not significant influence to the contents of available Cu. Correlation analysis showed that available Fe was significantly negatively related to the pH values and significantly negatively related to the organic matter of soils, available Mn was significantly negatively related to the pH values and organic matter of soils, whereas the available Zn was significantly positively related to total Zn. The contents of Fe, Mn in rice root, the contents of Fe, Mn, Cu and Cd in rice straw and Cu in brown rice were higher under paddy-upland rotation, ridge-no-tillage and compartments-no-tillage than those in conventional tillage and no-tillage and fellow in winter. Paddy-upland rotation can significantly lower the migration coefficient value of Cd in brown rice, and the Pb, Cd concentration in brown rice in the treatment of paddy-upland rotation was lower than the upper limit (< 0.2 mg x kg(-1)) of the National Standard for Food Hygiene for Cd concentration. The content of Fe in root was significantly and negatively related with soil pH and significantly and positively related with soil available Fe, the content of Mn in root was significantly negatively related with soil pH and significantly positively related with soil available Mn, the content of Mn in straw was significantly negatively related with soil pH, significantly positively related with soil total Mn and significantly positively related with soil available Mn, the content of Cu in straw and brown rice was significantly negatively related with soil pH, the content of Zn was significant related with soil pH and significant related with soil CEC. The content of Fe in root, Mn in root and straw and Cd in straw was positively related with soil available Fe, Mn and Cd, respectively, but was negatively related with pH in plough layer soil, Zn in straw was also negatively related with plough layer soil pH. From the results as above, it is concluded that different tillage methods can change the values of soil pH, alter the availability of heavy metal in soils, consequently affect uptake of heavy metal by rice. Of the tillage methods, paddy-upland rotation could increase the availability of Fe and Mn, but decrease the availability of Zn, Pb and Cd in purple paddy soils. Paddy-upland rotation can also increase the contents of Fe, Mn in rice root and straw, but decrease Cd content in brown rice, and could reduce the Pb, Cd contents in brown rice in a certain extent, however, attention should be given to long-term paddy-upland rotation cause of leaching of soil surface Mn.

Heavy metals concentration and availability of different soils in Sabzevar area, NE of Iran

NASA Astrophysics Data System (ADS)

Mazhari, Seyed Ali; Sharifiyan Attar, Reza; Haghighi, Faezeh

2017-10-01

Soils developed in the Sabzevar ophiolitic area originate from different bedrocks. All samples display similar physico-chemical properties, but heavy metal concentrations vary extremely in different soil samples. Serpentine soils have the highest total concentration of Cr, Ni and Co; while soils derived from mafic rocks (olivine basalts and hornblende gabbros) show the highest Cu (85.29-109.11 ppm) and Zn (46.88-86.60 ppm). The DTPA-extraction of soil samples indicates that the order of metal bioavailability was Cr3% of total Cr; >12% of total Co and >17% of total Zn). Oxide minerals (such as chromite and magnetite) in Sabzevar soils play as resistant minerals and impede the heavy metal availability; while forsterite, pyroxene, serpentine and talc are more labile and show higher DTPA-extractable of heavy metals.

Topographic, edaphic, and vegetative controls on plant-available water

USGS Publications Warehouse

Dymond, Salli F.; Bradford, John B.; Bolstad, Paul V.; Kolka, Randall K.; Sebestyen, Stephen D.; DeSutter, Thomas S.

2017-01-01

Soil moisture varies within landscapes in response to vegetative, physiographic, and climatic drivers, which makes quantifying soil moisture over time and space difficult. Nevertheless, understanding soil moisture dynamics for different ecosystems is critical, as the amount of water in a soil determines a myriad ecosystem services and processes such as net primary productivity, runoff, microbial decomposition, and soil fertility. We investigated the patterns and variability in in situ soil moisture measurements converted to plant-available water across time and space under different vegetative cover types and topographic positions at the Marcell Experimental Forest (Minnesota, USA). From 0 – 228.6 cm soil depth, plant-available water was significantly higher under the hardwoods (12%), followed by the aspen (8%) and red pine (5%) cover types. Across the same soil depth, toeslopes were wetter (mean plant-available water = 10%) than ridges and backslopes (mean plant-available water was 8%), although these differences were not statistically significant (p < 0.05). Using a mixed model of fixed and random effects, we found that cover type, soil texture, and time were related to plant-available water and that topography was not significantly related to plant-available water within this low-relief landscape. Additionally, during the three-year monitoring period, red pine and quaking aspen sites experienced plant-available water levels that may be considered limiting to plant growth and function. Given that increasing temperatures and more erratic precipitation patterns associated with climate change may result in decreased soil moisture in this region, these species may be sensitive and vulnerable to future shifts in climate.

[Differential Effect and Mechanism of in situ Immobilization of Cadmium Contamination in Soil Using Diatomite Produced from Different Areas].

PubMed

Zhu, Jian; Wang, Ping; Lin, Yan; Lei, Ming-jing; Chen, Yang

2016-02-15

In order to understand the difference of in situ immobilization effect and mechanism of Cd contamination in soil using diatomite produced from different areas, the test was conducted using diatomite produced from Yunnan Tengchong, Jilin Linjiang, Zhejiang Shengzhou and Henan Xinyang of China as modifiers to immobilize cadmium contamination in simulated soil. The results indicated that the diatomite from all the four producing areas could effectively immobilize available Cd in soil, decreasing the available Cd content in soil by 27.7%, 28.5%, 30.1% and 57.2%, respectively when the adding concentration was 30 g x kg(-1). Their ability for immobilizing available Cd in soil followed the sequence of Henan Xinyang > Zhejiang Shengzhou > Jilin Linjiang > Yunnan Tengchong. It was also found that the physical and chemical properties of diatomite played a main role in soil cadmium immobilization, lower bulk density, larger specific surface area, more micro pores and wider distribution range of aperture were more favorable for available Cd immobilization. The results also showed that, the diatomite could control Cd contamination by changing soil physical and chemical properties, among these properties, pH and organic matter content were the key factors, increasing soil pH value and organic matter content was favorable for available cadmium immobilization, while the soil water content had little effect on available cadmium immobilization. The control of soil cadmium contamination by using diatomite to change cation exchange capacity was limited by time in some degree. The diatomite produced from Henan Xinyang, Zhejiang Shengzhou and Yunnan Tengchong increased the soil pH value and organic matter content, and was favorable for available Cd immobilization, while the diatomite from Jilin Linjiang showed converse effect.

Bioventing remediation and ecotoxicity evaluation of phenanthrene-contaminated soil.

PubMed

García Frutos, F Javier; Escolano, Olga; García, Susana; Babín, Mar; Fernández, M Dolores

2010-11-15

The objectives of soil remediation processes are usually based on threshold levels of soil contaminants. However, during remediation processes, changes in bioavailability and metabolite production can occur, making it necessary to incorporate an ecotoxicity assessment to estimate the risk to ecological receptors. The evolution of contaminants and soil ecotoxicity of artificially phenanthrene-contaminated soil (1000 mg/kg soil) during soil treatment through bioventing was studied in this work. Bioventing was performed in glass columns containing 5.5 kg of phenanthrene-contaminated soil and uncontaminated natural soil over a period of 7 months. Optimum conditions of mineralisation (humidity=60% WHC; C/N/P=100:20:1) were determined in a previous work. The evolution of oxygen consumption, carbon dioxide production, phenanthrene concentration and soil toxicity were studied on sacrificed columns at periods of 0, 3 and 7 months. Toxicity to soil and aquatic organisms was determined using a multispecies system in the soil columns (MS-3). In the optimal bioventing treatability test, we obtained a reduction rate in phenanthrene concentration higher that 93% after 7 months of treatment. The residual toxicity obtained at the end of the treatment was not attributed to the low phenanthrene concentration, but to the ammonia used to restore the optimal C/N ratio. Copyright © 2010 Elsevier B.V. All rights reserved.

The Future Lunar Flora Colony

NASA Astrophysics Data System (ADS)

Goel, E. G.; Guven, U. G.

2017-10-01

A constructional design for the primary establishment for a lunar colony using the micrometeorite rich soil is proposed. It highlights the potential of lunar regolith combined with Earth technology for water and oxygen for human outposts on the Moon.

Evaluation of soil amendments as a remediation alternative for cadmium contaminated soils under cacao plantations

USDA-ARS?s Scientific Manuscript database

Elevated plant-available cadmium (Cd) in soils results in contamination to cacao (Theobroma cacao L) beans. Effectiveness of vermicompost and zeolite in reducing available Cd in three cacao-growing soils was studied under laboratory conditions. Sorption-desorption experiments were conducted in soils...

Medusahead: Available soil N and microbial communities in native and invasive soils

Treesearch

Robert R. Blank; Rene Sforza; Tye Morgan

2008-01-01

To better understand why medusahead (Taeniatherum caput-medusae) is invasive, we quantified soil N availability and characterized soil microbial communities between native and invasive populations. No consistent differences in soil N mineralization potentials were noted between native medusahead sites in Spain, Turkey, France, and Greece and two...

**1**5N-NMR INVESTIGATION OF HYDROXYLAMINE DERIVATIZED HUMIC SUBSTANCES.

USGS Publications Warehouse

Thorn, Kevin A.; Arterburn, Jeffrey B.; Mikita, Michael A.

1986-01-01

Humic substances are the most abundant naturally occurring refactory organic compounds in soils and water. They have a broad range of physical, chemical and physiological properties. In soils, humic substances contribute to the cation exchange capacity, help maintain the physical structure, and play a role in plant growth and nutrition. In aquatic systems, humic substances serve to regulate the levels of inorganic constituents, yield trihalomethanes upon chlorination, and transport or concentrate organic and inorganic pollutants. The oxygen containing functional groups of humic and fulvic acids are believed to play a key role in the chemical properties of humic substances. This study was undertaken to gain additional information on the specific types of oxygen functionalities in humic substances. Since the analysis of hydroxyl moieties had been earlier established, we focused our attention on the analysis of ketone and aldehyde functional groups in humic substances.

Plant absorption of trace elements in sludge amended soils and correlation with soil chemical speciation.

PubMed

Torri, Silvana; Lavado, Raúl

2009-07-30

The aim of the present study was to investigate the relationship between Lolium perenne L. uptake of Cd, Cu, Pb, and Zn in sludge amended soils and soil availability of these elements assessed by soil sequential extraction. A greenhouse experiment was set with three representative soils of the Pampas Region, Argentina, amended with sewage sludge and sewage sludge enriched with its own incinerated ash. After the stabilization period of 60 days, half of the pots were sampled for soil analysis; the rest of the pots were sown with L. perenne and harvested 8, 12, 16 and 20 weeks after sowing, by cutting just above the soil surface. Cadmium and Pb concentrations in aerial tissues of L. perenne were below detection limits, in good agreement with the soil fractionation study. Copper and Zn concentration in the first harvest were significantly higher in the coarse textured soil compared to the fine textured soil, in contrast with soil chemical speciation. In the third harvest, there was a positive correlation between Cu and Zn concentration in aerial biomass and soil fractions usually considered of low availability. We conclude that the most available fractions obtained by soil sequential extraction did not provide the best indicator of Cu and Zn availability to L. perenne.

The oxygen isotope composition of phosphate released from phytic acid by the activity of wheat and Aspergillus niger phytase

NASA Astrophysics Data System (ADS)

von Sperber, C.; Tamburini, F.; Brunner, B.; Bernasconi, S. M.; Frossard, E.

2015-07-01

Phosphorus (P) is an essential nutrient for living organisms. Under P-limiting conditions plants and microorganisms can exude extracellular phosphatases that release inorganic phosphate (Pi) from organic phosphorus compounds (Porg). Phytic acid (myo-inositol hexakisphosphate, IP6) is an important form of Porg in many soils. The enzymatic hydrolysis of IP6 by phytase yields available Pi and less phosphorylated inositol derivates as products. The hydrolysis of organic P compounds by phosphatases leaves an isotopic imprint on the oxygen isotope composition (δ18O) of released Pi, which might be used to trace P in the environment. This study aims at determining the effect of phytase on the oxygen isotope composition of released Pi. For this purpose, enzymatic assays with histidine acid phytases from wheat and Aspergillus niger were prepared using IP6, adenosine 5'-monophosphate (AMP) and glycerophosphate (GPO4) as substrates. For a comparison to the δ18O of Pi released by other extracellular enzymes, enzymatic assays with acid phosphatases from potato and wheat germ with IP6 as a substrate were prepared. During the hydrolysis of IP6 by phytase, four of the six Pi were released, and one oxygen atom from water was incorporated into each Pi. This incorporation of oxygen from water into Pi was subject to an apparent inverse isotopic fractionation (ϵ ~ 6 to 10 ‰), which was similar to that imparted by acid phosphatase from potato during the hydrolysis of IP6 (ϵ ~ 7 ‰), where less than three Pi were released. The incorporation of oxygen from water into Pi during the hydrolysis of AMP and GPO4 by phytase yielded a normal isotopic fractionation (ϵ ~ -12 ‰), similar to values reported for acid phosphatases from potato and wheat germ. We attribute this similarity in ϵ to the same amino acid sequence motif (RHGXRXP) at the active site of these enzymes, which leads to similar reaction mechanisms. We suggest that the striking substrate dependency of the isotopic fractionation could be attributed to a difference in the δ18O values of the C-O-P bridging and non-bridging oxygen atoms in organic phosphate compounds.

The oxygen isotope composition of phosphate released from phytic acid by the activity of wheat and Aspergillus niger phytase

NASA Astrophysics Data System (ADS)

Sperber, C. v.; Tamburini, F.; Brunner, B.; Bernasconi, S. M.; Frossard, E.

2015-03-01

Phosphorus (P) is an essential nutrient for living organisms. Under P-limiting conditions plants and microorganisms can exude extracellular phosphatases that release inorganic phosphate (Pi) from organic phosphorus compounds (Porg). Phytic acid (IP6) is an important form of Porg in many soils. The enzymatic hydrolysis of IP6 by phytase yields plant available inorganic phosphate (Pi) and less phosphorylated inositol derivates as products. The hydrolysis of organic P-compounds by phosphatases leaves an isotopic imprint on the oxygen isotope composition (δ18O) of released Pi, which might be used to trace P in the environment. This study aims at determining the effect of phytase on the oxygen isotope composition of released Pi. For this purpose, enzymatic assays with histidine acid phytases from wheat and Aspergillus niger were prepared using IP6, adenosine 5'monophosphate (AMP) and glycerophosphate (GPO4) as substrates. For a comparison to the δ18O of Pi released by other extracellular enzymes, enzymatic assays with acid phosphatases from potato and wheat germ with IP6 as substrate were prepared. During the hydrolysis of IP6 by phytase, four Pi are released, and one oxygen atom from water is incorporated into each Pi. This incorporation of oxygen from water into Pi is subject to an apparent inverse isotopic fractionation (ϵ ∼ 6 to 10‰), which is similar to that imparted by acid phosphatase from potato during the hydrolysis of IP6 (ϵ ∼ 7‰) where less than three Pi are released. The incorporation of oxygen from water into Pi during the hydrolysis of AMP and GPO4 by phytase yielded a normal isotopic fractionation (ϵ ∼ -12‰), again similar to values reported for acid phosphatases from potato and wheat germ. We attribute this similarity in ɛ to the same amino acid sequence motif (RHGXRXP) at the active site of these enzymes, which leads to similar reaction mechanisms. We suggest that the striking substrate-dependency of the isotopic fractionation could be attributed to a difference in the δ18O-values of the C-O-P bridging and non-bridging oxygen atoms in organic phosphate compounds.

Assessing the Impact of Organic Carbon on Nitrous Oxide Fluxes in Soils

NASA Astrophysics Data System (ADS)

Akrami, N.; Horwath, W. R.

2016-12-01

Fertilized agriculture is a significant source of the most potent green house gas (GHG), Nitrous Oxide (N2O), emissions. N2O's contribution to climate change through radioactive forcing is 265 times higher than that of Carbon dioxide (CO2). While literature has been mainly focused on N2O production, it is critical to point out that N2O emissions are the result of both production and consumption processes. There is not sufficient research in the literature focusing on the N2O consumption pathways and mechanisms as well as quantification of the rate of N2O consumption in soils. This work is an effort to address one of the most important environmental controlling factors for the soil to be assumed as a possible N2O sink and presumably account for N2O budget imbalances. In this study we introduce soil organic carbon (SOC) as a key criterion controlling N2O consumption processes mainly through affecting soil redox potential. We also quantify N2O consumption rates in both aerobic and anaerobic conditions under different carbon content scenarios. A batch incubation study is conducted on soils (0-15) cm collected from rice agricultural lands in Sacramento-San Joaquin delta consisting of 1%, 5%, 11% and 23% carbon. N2O consumption and production rates for all incubations (including 4 replicates) are measured under different treatments and the impact of Oxygen and Carbon content on N2O fluxes is evaluated. Results show higher N2O production and consumption rates in the soils with higher SOC content and lower Oxygen content. This study reveals that peat lands with high organic carbon content can be managed to be hotspots for Nitrous Oxide (N2O) consumption and might have the capacity to act as N2O sinks.

Waterlogging-induced changes in root architecture of germplasm accessions of the tropical forage grass Brachiaria humidicola.

PubMed

Cardoso, Juan Andrés; Jiménez, Juan de la Cruz; Rao, Idupulapati M

2014-04-08

Waterlogging is one of the major factors limiting the productivity of pastures in the humid tropics. Brachiaria humidicola is a forage grass commonly used in zones prone to temporary waterlogging. Brachiaria humidicola accessions adapt to waterlogging by increasing aerenchyma in nodal roots above constitutive levels to improve oxygenation of root tissues. In some accessions, waterlogging reduces the number of lateral roots developed from main root axes. Waterlogging-induced reduction of lateral roots could be of adaptive value as lateral roots consume oxygen supplied from above ground via their parent root. However, a reduction in lateral root development could also be detrimental by decreasing the surface area for nutrient and water absorption. To examine the impact of waterlogging on lateral root development, an outdoor study was conducted to test differences in vertical root distribution (in terms of dry mass and length) and the proportion of lateral roots to the total root system (sum of nodal and lateral roots) down the soil profile under drained or waterlogged soil conditions. Plant material consisted of 12 B. humidicola accessions from the gene bank of the International Center for Tropical Agriculture, Colombia. Rooting depth was restricted by 21 days of waterlogging and confined to the first 30 cm below the soil surface. Although waterlogging reduced the overall proportion of lateral roots, its proportion significantly increased in the top 10 cm of the soil. This suggests that soil flooding increases lateral root proliferation of B. humidicola in the upper soil layers. This may compensate for the reduction of root surface area brought about by the restriction of root growth at depths below 30 cm. Further work is needed to test the relative efficiency of nodal and lateral roots for nutrient and water uptake under waterlogged soil conditions. Published by Oxford University Press on behalf of the Annals of Botany Company.

Carbon input increases microbial nitrogen demand, but not microbial nitrogen mining in boreal forest soils

NASA Astrophysics Data System (ADS)

Wild, Birgit; Alaei, Saeed; Bengtson, Per; Bodé, Samuel; Boeckx, Pascal; Schnecker, Jörg; Mayerhofer, Werner; Rütting, Tobias

2016-04-01

Plant primary production at mid and high latitudes is often limited by low soil N availability. It has been hypothesized that plants can indirectly increase soil N availability via root exudation, i.e., via the release of easily degradable organic compounds such as sugars into the soil. These compounds can stimulate microbial activity and extracellular enzyme synthesis, and thus promote soil organic matter (SOM) decomposition ("priming effect"). Even more, increased C availability in the rhizosphere might specifically stimulate the synthesis of enzymes targeting N-rich polymers such as proteins that store most of the soil N, but are too large for immediate uptake ("N mining"). This effect might be particularly important in boreal forests, where plants often maintain high primary production in spite of low soil N availability. We here tested the hypothesis that increased C availability promotes protein depolymerization, and thus soil N availability. In a laboratory incubation experiment, we added 13C-labeled glucose to a range of soil samples derived from boreal forests across Sweden, and monitored the release of CO2 by C mineralization, distinguishing between CO2 from the added glucose and from the native, unlabeled soil organic C (SOC). Using a set of 15N pool dilution assays, we further measured gross rates of protein depolymerization (the breakdown of proteins into amino acids) and N mineralization (the microbial release of excess N as ammonium). Comparing unamended control samples, we found a high variability in C and N mineralization rates, even when normalized by SOC content. Both C and N mineralization were significantly correlated to SOM C/N ratios, with high C mineralization at high C/N and high N mineralization at low C/N, suggesting that microorganisms adjusted C and N mineralization rates to the C/N ratio of their substrate and released C or N that was in excess. The addition of glucose significantly stimulated the mineralization of native SOC in soils where C availability was initially low, but this priming effect was not linked to increased gross protein depolymerization rates. Similarly, we found no connection to increased activities of enzymes targeting N-containing polymers such as proteins or chitin. Instead, glucose addition increased the microbial efficiency to use the N already available, as indicated by lower gross N mineralization rates and lower concentrations of inorganic N in the soil. We emphasize that these findings do not generally preclude that higher C availability can induce microbial N mining and thus enhance soil N availability in some soils, but that such an effect cannot be universally assumed. In contrast, the changes in microbial N dynamics observed across our range of boreal forest soils suggest that higher C availability can at least in some soils increase N storage within microbial bio- and necromass, thus reducing N availability for plants, but also constraining soil N losses, e.g., by nitrate leaching and denitrification.

Effect of soil type and moisture availability on the foraging behavior of the Formosan subterranean termite (Isoptera: Rhinotermitidae).

PubMed

Cornelius, Mary L; Osbrink, Weste L A

2010-06-01

This study examined the influence of soil type and moisture availability on termite foraging behavior. Physical properties of the soil affected both tunneling behavior and shelter tube construction. Termites tunneled through sand faster than top soil and clay. In containers with top soil and clay, termites built shelter tubes on the sides of the containers. In containers with sand, termites built shelter tubes directly into the air and covered the sides of the container with a layer of sand. The interaction of soil type and moisture availability affected termite movement, feeding, and survival. In assays with moist soils, termites were more likely to aggregate in top soil over potting soil and peat moss. However, termites were more likely to move into containers with dry peat moss and potting soil than containers with dry sand and clay. Termites were also significantly more likely to move into containers with dry potting soil than dry top soil. In the assay with dry soils, termite mortality was high even though termites were able to travel freely between moist sand and dry soil, possibly due to desiccation caused by contact with dry soil. Evaporation from potting soil and peat moss resulted in significant mortality, whereas termites were able to retain enough moisture in top soil, sand, and clay to survive for 25 d. The interaction of soil type and moisture availability influences the distribution of foraging termites in microhabitats.

[Spatial variability of surface soil nutrients in the landslide area of Beichuan County, South- west China, after 5 · 12 Wenchuan Earthquake].

PubMed

Mai, Ji-shan; Zhao, Ting-ning; Zheng, Jiang-kun; Shi, Chang-qing

2015-12-01

Based on grid sampling and laboratory analysis, spatial variability of surface soil nutrients was analyzed with GS⁺ and other statistics methods on the landslide area of Fenghuang Mountain, Leigu Town, Beichuan County. The results showed that except for high variability of available phosphorus, other soil nutrients exhibited moderate variability. The ratios of nugget to sill of the soil available phosphorus and soil organic carbon were 27.9% and 28.8%, respectively, showing moderate spatial correlation, while the ratios of nugget to sill of the total nitrogen (20.0%), total phosphorus (24.3%), total potassium (11.1%), available nitrogen (11.2%), and available potassium (22.7%) suggested strong spatial correlation. The total phosphorus had the maximum range (1232.7 m), followed by available nitrogen (541.27 m), total nitrogen (468.35 m), total potassium (136.0 m), available potassium (128.7 m), available phosphorus (116.6 m), and soil organic carbon (93.5 m). Soil nutrients had no significant variation with the increase of altitude, but gradually increased from the landslide area, the transition area, to the little-impacted area. The total and available phosphorus contents of the landslide area decreased by 10.3% and 79.7% compared to that of the little-impacted area, respectively. The soil nutrient contents in the transition area accounted for 31.1%-87.2% of that of the little-impacted area, with the nant reason for the spatial variability of surface soil nutrients.

A hybrid process of biofiltration of secondary effluent followed by ozonation and short soil aquifer treatment for water reuse.

PubMed

Zucker, I; Mamane, H; Cikurel, H; Jekel, M; Hübner, U; Avisar, D

2015-11-01

The Shafdan reclamation project facility (Tel Aviv, Israel) practices soil aquifer treatment (SAT) of secondary effluent with hydraulic retention times (HRTs) of a few months to a year for unrestricted agricultural irrigation. During the SAT, the high oxygen demand (>40 mg L(-1)) of the infiltrated effluent causes anoxic conditions and mobilization of dissolved manganese from the soil. An additional emerging problem is the occurrence of persistent trace organic compounds (TrOCs) in reclaimed water that should be removed prior to reuse. An innovative hybrid process based on biofiltration, ozonation and short SAT with ∼22 d HRT is proposed for treatment of the Shafdan secondary effluent to overcome limitations of the existing system and to reduce the SAT's physical footprint. Besides efficient removal of particulate matter to minimize clogging, coagulation/flocculation and filtration (5-6 m h(-1)) operated with the addition of hydrogen peroxide as an oxygen source efficiently removed dissolved organic carbon (DOC, to 17-22%), ammonium and nitrite. This resulted in reduced effluent oxygen demand during infiltration and oxidant (ozone) demand during ozonation by 23 mg L(-1) and 1.5 mg L(-1), respectively. Ozonation (1.0-1.2 mg O3 mg DOC(-1)) efficiently reduced concentrations of persistent TrOCs and supplied sufficient dissolved oxygen (>30 mg L(-1)) for fully oxic operation of the short SAT with negligible Mn(2+) mobilization (<50 μg L(-1)). Overall, the examined hybrid process provided DOC reduction of 88% to a value of 1.2 mg L(-1), similar to conventional SAT, while improving the removal of TrOCs and efficiently preventing manganese dissolution. Copyright © 2015 Elsevier Ltd. All rights reserved.

The Surface Chemical Composition of Lunar Samples and Its Significance for Optical Properties

NASA Technical Reports Server (NTRS)

Gold, T.; Bilson, E.; Baron, R. L.

1976-01-01

The surface iron, titanium, calcium, and silicon concentration in numerous lunar soil and rock samples was determined by Auger electron spectroscopy. All soil samples show a large increase in the iron to oxygen ratio compared with samples of pulverized rock or with results of the bulk chemical analysis. A solar wind simulation experiment using 2 keV energy alpha -particles showed that an ion dose corresponding to approximately 30,000 years of solar wind increased the iron concentration on the surface of the pulverized Apollo 14 rock sample 14310 to the concentration measured in the Apollo 14 soil sample 14163, and the albedo of the pulverized rock decreased from 0.36 to 0.07. The low albedo of the lunar soil is related to the iron + titanium concentration on its surface. A solar wind sputter reduction mechanism is discussed as a possible cause for both the surface chemical and optical properties of the soil.

Multiple evaluations of the removal of pollutants in road runoff by soil infiltration.

PubMed

Murakami, Michio; Sato, Nobuyuki; Anegawa, Aya; Nakada, Norihide; Harada, Arata; Komatsu, Toshiya; Takada, Hideshige; Tanaka, Hiroaki; Ono, Yoshiro; Furumai, Hiroaki

2008-05-01

Groundwater replenishment by infiltration of road runoff is expected to be a promising option for ensuring a sustainable urban water cycle. In this study, we performed a soil infiltration column test using artificial road runoff equivalent to approximately 11-12 years of rainfall to evaluate the removal of pollutants by using various chemical analyses and bioassay tests. These results indicated that soil infiltration treatment works effectively to remove most of the pollutants such as organic matter (chemical oxygen demand (CODMn) and dissolved organic carbon (DOC)), P species, polycyclic aromatic hydrocarbons (PAHs), numerous heavy metals and oestrogenic activities. Bioassay tests, including algal growth inhibition test, Microtox and mutagen formation potential (MFP) test, also revealed effective removal of toxicities by the soils. However, limited amounts of NO3, Mn, Ni, alkaline earth metals, perfluorooctane sulphonate (PFOS) and perfluorooctane sulphonamide (FOSA) were removed by the soils and they possibly reach the groundwater and cause contamination.

Interactions of aniline with soil and groundwater at an industrial spill site.

PubMed Central

Kosson, D S; Byrne, S V

1995-01-01

The interactions of aniline with soil at an industrial spill site were investigated. Sorption of aniline to the soil was observed to occur through a two-step mechanism. The first step was an ion exchange process with the protonated amine serving as an organic cation. This step was influenced by solution pH and ionic composition. The second step was covalent bonding most likely with quinone moieties and oxidation with polymerization of aniline. The extent of covalent bonding was influenced by the presence of oxygen and redox potential. The majority of aniline that was bound to the soil did not readily desorb under a variety of abiotic conditions. However, aniline was released to a significant extent in the presence of denitrifying and methanogenic microbial activity. Aniline in aqueous solution was readily biodegradable under aerobic and denitrifying conditions. Soil-bound aniline was observed not to be biodegradable. This paper provides an overview of results. PMID:8565915

Iron-mediated soil carbon response to water-table decline in an alpine wetland

NASA Astrophysics Data System (ADS)

Wang, Yiyun; Wang, Hao; He, Jin-Sheng; Feng, Xiaojuan

2017-06-01

The tremendous reservoir of soil organic carbon (SOC) in wetlands is being threatened by water-table decline (WTD) globally. However, the SOC response to WTD remains highly uncertain. Here we examine the under-investigated role of iron (Fe) in mediating soil enzyme activity and lignin stabilization in a mesocosm WTD experiment in an alpine wetland. In contrast to the classic `enzyme latch' theory, phenol oxidative activity is mainly controlled by ferrous iron [Fe(II)] and declines with WTD, leading to an accumulation of dissolvable aromatics and a reduced activity of hydrolytic enzyme. Furthermore, using dithionite to remove Fe oxides, we observe a significant increase of Fe-protected lignin phenols in the air-exposed soils. Fe oxidation hence acts as an `iron gate' against the `enzyme latch' in regulating wetland SOC dynamics under oxygen exposure. This newly recognized mechanism may be key to predicting wetland soil carbon storage with intensified WTD in a changing climate.

Seasonal changes in depth of water uptake for encroaching trees Juniperus virginiana and Pinus ponderosa and two dominant C4 grasses in a semiarid grassland.

PubMed

Eggemeyer, Kathleen D; Awada, Tala; Harvey, F Edwin; Wedin, David A; Zhou, Xinhua; Zanner, C William

2009-02-01

We used the natural abundance of stable isotopic ratios of hydrogen and oxygen in soil (0.05-3 m depth), plant xylem and precipitation to determine the seasonal changes in sources of soil water uptake by two native encroaching woody species (Pinus ponderosa P. & C. Lawson, Juniperus virginiana L.), and two C(4) grasses (Schizachyrium scoparium (Michx.) Nash, Panicum virgatum L.), in the semiarid Sandhills grasslands of Nebraska. Grass species extracted most of their water from the upper soil profile (0.05-0.5 m). Soil water uptake from below 0.5 m depth increased under drought, but appeared to be minimal in relation to the total water use of these species. The grasses senesced in late August in response to drought conditions. In contrast to grasses, P. ponderosa and J. virginiana trees exhibited significant plasticity in sources of water uptake. In winter, tree species extracted a large fraction of their soil water from below 0.9 m depth. In spring when shallow soil water was available, tree species used water from the upper soil profile (0.05-0.5 m) and relied little on water from below 0.5 m depth. During the growing season (May-August) significant differences between the patterns of tree species water uptake emerged. Pinus ponderosa acquired a large fraction of its water from the 0.05-0.5 and 0.5-0.9 m soil profiles. Compared with P. ponderosa, J. virginiana acquired water from the 0.05-0.5 m profile during the early growing season but the amount extracted from this profile progressively declined between May and August and was mirrored by a progressive increase in the fraction taken up from 0.5-0.9 m depth, showing plasticity in tracking the general increase in soil water content within the 0.5-0.9 m profile, and being less responsive to growing season precipitation events. In September, soil water content declined to its minimum, and both tree species shifted soil water uptake to below 0.9 m. Tree transpiration rates (E) and water potentials (Psi) indicated that deep water sources did not maintain E which sharply declined in September, but played an important role in the recovery of tree Psi. Differences in sources of water uptake among these species and their ecological implications on tree-grass dynamics and soil water in semiarid environments are discussed.

Contrasting effects of untreated textile wastewater onto the soil available nitrogen-phosphorus and enzymatic activities in aridisol.

PubMed

Arif, Muhammad Saleem; Riaz, Muhammad; Shahzad, Sher Muhammad; Yasmeen, Tahira; Buttler, Alexandre; Garcıa-Gil, Juan Carlos; Roohi, Mahnaz; Rasool, Akhtar

2016-02-01

Water shortage and soil qualitative degradation are significant environmental problems in arid and semi-arid regions of the world. The increasing demand for water in agriculture and industry has resulted in the emergence of wastewater use as an alternative in these areas. Textile wastewater is produced in surplus amounts which poses threat to the environment as well as associated flora and fauna. A 60-day incubation study was performed to assess the effects of untreated textile wastewater at 0, 25, 50, 75, and 100% dilution levels on the physico-chemical and some microbial and enzymatic properties of an aridisol soil. The addition of textile wastewater provoked a significant change in soil pH and electrical conductivity and soil dehydrogenase and urease activities compared to the distilled-water treated control soil. Moreover, compared to the control treatment, soil phosphomonoesterase activity was significantly increased from 25 to 75% application rates, but decreased at 100% textile wastewater application rate. Total and available soil N contents increased significantly in response to application of textile wastewater. Despite significant increases in the soil total P contents after the addition of textile wastewater, soil available P content decreased with increasing concentration of wastewater. Changes in soil nutrient contents and related enzymatic activities suggested a dynamic match between substrate availability and soil N and P contents. Aridisols have high fixation and low P availability, application of textile wastewater to such soils should be considered only after careful assessment.

A modified sulfate process to lunar oxygen

NASA Technical Reports Server (NTRS)

Sullivan, Thomas A.

1992-01-01

A modified sulfate process which produces oxygen from iron oxide-bearing minerals in lunar soil is under development. Reaction rates of ilmenite in varying strength sulfuric acid have been determined. Quantitative conversion of ilmenite to ferrous sulfate was observed over a range of temperatures and concentrations. Data has also been developed on the calcination of by-product sulfates. System engineering for overall operability and simplicity has begun, suggesting that a process separating the digestion and sulfate dissolution steps may offer an optimum process.

Alleviation of the effects of saline-alkaline stress on maize seedlings by regulation of active oxygen metabolism by Trichoderma asperellum.

PubMed

Fu, Jian; Liu, Zhihua; Li, Zuotong; Wang, Yufeng; Yang, Kejun

2017-01-01

This study investigated the influence of Trichoderma asperellum on active oxygen production in maize seedlings under saline-alkaline stress conditions. Two maize cultivars were tested: 'Jiangyu 417' ('JY417'), which can tolerate saline-alkaline stress; and, 'Xianyu 335' ('XY335'), which is sensitive to saline-alkaline stress. The seedlings were grown on natural saline-alkaline soil (pH 9.30) in plastic pots. To each liter of saline-alkaline soil, 200 mL of T. asperellum spore suspension was applied; three fungal suspensions were used, namely, 1 × 103, 1 × 106, and 1 × 109 spores/L. A control with only the vehicle applied was also established, along with a second control in which untreated meadow soil (pH 8.23) was used. Root and leaf samples were collected when the seedlings had three heart-shaped leaves and the fourth was in the developmental phase. Physical and biochemical parameters related to oxidation resistance were assessed. The results indicated that the 'JY417' and 'XY335' seedlings showed different degrees of oxidative damage and differences in their antioxidant defense systems under saline-alkaline stress. As the spore density of the fungal suspension increased, the K+ and Ca2+ contents in the seedlings increased, but Na+ content decreased. Moreover, fungal treatment promoted the synthesis or accumulation of osmolytes, which enhanced the water absorbing capacity of the cells, increased antioxidant enzyme activities, enhanced the content of non-enzyme antioxidants, and reduced the accumulation of reactive oxygen species. Fungal treatment alleviated oxidative damage caused by the saline-alkaline stress in roots and leaves of the seedlings. The application of T. asperellum overcame the inhibitory effect of saline-alkaline soil stress on the growth of maize seedlings. In the present experiment, application with 1 × 109 spores/L gave the optimal results.

A review on slurry bioreactors for bioremediation of soils and sediments

PubMed Central

Robles-González, Ireri V; Fava, Fabio; Poggi-Varaldo, Héctor M

2008-01-01

The aim of this work is to present a critical review on slurry bioreactors (SB) and their application to bioremediation of soils and sediments polluted with recalcitrant and toxic compounds. The scope of the review encompasses the following subjects: (i) process fundamentals of SB and analysis of advantages and disadvantages; (ii) the most recent applications of SB to laboratory scale and commercial scale soil bioremediation, with a focus on pesticides, explosives, polynuclear aromatic hydrocarbons, and chlorinated organic pollutants; (iii) trends on the use of surfactants to improve availability of contaminants and supplementation with degradable carbon sources to enhance cometabolism of pollutants; (iv) recent findings on the utilization of electron acceptors other than oxygen; (v) bioaugmentation and advances made on characterization of microbial communities of SB; (vi) developments on ecotoxicity assays aimed at evaluating bioremediation efficiency of the process. From this review it can be concluded that SB is an effective ad situ and ex situ technology that can be used for bioremediation of problematic sites, such as those characterized by soils with high contents of clay and organic matter, by pollutants that are recalcitrant, toxic, and display hysteretic behavior, or when bioremediation should be accomplished in short times under the pressure and monitoring of environmental agencies and regulators. SB technology allows for the convenient manipulation and control of several environmental parameters that could lead to enhanced and faster treatment of polluted soils: nutrient N, P and organic carbon source (biostimulation), inocula (bioaugmentation), increased availability of pollutants by use of surfactants or inducing biosurfactant production inside the SB, etc. An interesting emerging area is the use of SB with simultaneous electron acceptors, which has demonstrated its usefulness for the bioremediation of soils polluted with hydrocarbons and some organochlorinated compounds. Characterization studies of microbial communities of SB are still in the early stages, in spite of their significance for improving reactor operation and design optimization. We have identified the following niches of research needs for SB in the near and mid term future, inter alia: (i) application of SB with sequential and simultaneous electron acceptors to soils polluted with contaminants other than hydrocarbons (i.e., pesticides, explosives, etc.), (ii) evaluation of the technical feasibility of triphasic SB that use innocuous solvents to help desorbing pollutants strongly attached to soils, and in turn, to enhance their biodegradation, (iii) gaining deeper insight of microbial communities present in SB with the intensified application of molecular biology tools such as PCR-DGGE, PCR-TGGE, ARDRA, etc., (iv) development of more representative ecotoxicological assays to better assess the effectiveness of a given bioremediation process. PMID:18312630

Determination of Trace Available Heavy Metals in Soil Using Laser-Induced Breakdown Spectroscopy Assisted with Phase Transformation Method.

PubMed

Yi, Rongxing; Yang, Xinyan; Zhou, Ran; Li, Jiaming; Yu, Huiwu; Hao, Zhongqi; Guo, Lianbo; Li, Xiangyou; Lu, Yongfeng; Zeng, Xiaoyan

2018-05-18

To detect available heavy metals in soil using laser-induced breakdown spectroscopy (LIBS) and improve its poor detection sensitivity, a simple and low cost sample pretreatment method named solid-liquid-solid transformation was proposed. By this method, available heavy metals were extracted from soil through ultrasonic vibration and centrifuging and then deposited on a glass slide. Utilization of this solid-liquid-solid transformation method, available Cd and Pb elements in soil were detected successfully. The results show that the regression coefficients of calibration curves for soil analyses reach to more than 0.98. The limits of detection could reach to 0.067 and 0.94 ppm for available Cd and Pb elements in soil under optimized conditions, respectively, which are much better than those obtained by conventional LIBS.

Controls on N2 production via iron reduction coupled to anaerobic ammonium oxidation

NASA Astrophysics Data System (ADS)

Yang, W. H.; Weber, K.; Silver, W. L.

2011-12-01

Iron (Fe) reduction coupled to anaerobic ammonium (NH4+) oxidation is a novel nitrogen (N) cycling pathway that can lead to ecosystem N loss via production of dinitrogen (N2), nitrate (NO3-), or nitrite (NO2-). This pathway, termed Feammox, can short circuit the N cycle via direct N2 production or lead to N2O and N2 production via denitrification of Feammox-generated NO2- and NO3-. Theoretically, Feammox becomes less thermodynamically favorable as pH increases, with pH 6.5 as the threshold for favorability of Feammox to NO2- or NO3-. Availability of iron oxides may also limit Feammox rates because high labile C availability drives high Fe reduction rates under anaerobic soil conditions. In contrast, NH4+ availability may not be a strong control on Feammox rates if gross mineralization and/or dissimilatory NO3- reduction to NH4+ continue to produce NH4+ under anaerobic conditions. We performed laboratory experiments using surface soils (0-10 cm depth) from the Luquillo Experimental Forest, Puerto Rico to investigate the controls on Feammox rates. Soil slurries were pre-incubated in an oxygen (O2)-free glove box for 6 days to deplete background O2, NO2-, and NO3-. We measured the 30N2 mole fraction of produced N2 at 24 hours after the addition of either 15NH4+ alone or 15NH4+ in stoichiometric equivalency with an amorphous Fe(III) gel (HFO) to the soil slurries (n = 8). Feammox rates were conservatively estimated from 30N2 alone because 30N2 production could result only from Feammox of 15NH4+ whereas 29N2 production could result from a variety of pathways. In soils at pH 4.27 ± 0.02, we measured rates of Feammox ranging from 0.32 ± 0.13 μg N g-1 d-1 (± SE), following 15NH4+ addition alone, to 1.20 ± 0.28 μg N g-1 d-1 with the addition of both 15NH4+ and Fe(III). In soils at pH 6.12 ± 0.03, Feammox rates ranged from 0.03 ± 0.01 μg N g-1 d-1, following 15NH4+ addition alone, to 0.02 ± 0.01 μg N g-1 d-1 with the addition of both 15NH4+ and Fe(III). Our data suggest that the threshold for thermodynamic favorability of Feammox may be lower than calculated (~6.2) and that the Fe oxide limitation of Feammox rates is less important at high pH. Feammox is most likely to occur in highly weathered soils rich in poorly crystalline Fe that experience fluctuating redox conditions so that Fe oxides are replenished and relatively low pH conditions are restored during oxic periods.

Effectiveness of lime and peat applications on cadmium availability in a paddy soil under various moisture regimes.

PubMed

Chen, Yanhui; Xie, Tuanhui; Liang, Qiaofeng; Liu, Mengjiao; Zhao, Mingliu; Wang, Mingkuang; Wang, Guo

2016-04-01

In paddy soils, amendments and moisture play important role in the immobilization of cadmium (Cd). The effects of applying lime, peat, and a combination of both on soil Eh, pH, and Cd availability in contaminated soils were investigated under wetted (80 ± 5 % of water holding capacity) and flooded (completely submerged) conditions. In wetted soils, there was little change in Eh, compared to flooded soils where Eh reduced rapidly. Amendments of lime only or in a mixture with peat increased soil pH to different degrees, depending on the lime application rate. However, peat addition only slightly affected soil pH. The decreased Cd availability in flooded soils was related to submergence duration and was significantly lower than that in wetted soils after 14 days. Liming wetted and flooded soils decreased exchangeable Cd and increased carbonates or Fe-Mn oxides bound fractions, while peat addition transformed Cd from carbonates to organic matter bound fractions. The combined application of peat and lime generally showed better inhibitory effects on the availability of Cd than separately application of lime or peat. Higher application rates of lime, peat, or their mixture were more effective at reducing Cd contamination in flooded soil. This indicates that application of peat and lime mixture under flooded conditions was most effective for in situ remediation of Cd-contaminated soils. Further studies are required to assess the long-term effectiveness of the peat and lime mixture on Cd availability in paddy soils.

Resources for a lunar base: Rocks, minerals, and soil of the Moon

NASA Technical Reports Server (NTRS)

Taylor, Lawrence A.

1992-01-01

The rocks and minerals of the Moon will be included among the raw materials used to construct a lunar base. The lunar regolith, the fragmental material present on the surface of the Moon, is composed mostly of disaggregated rocks and minerals, but also includes glassy fragments fused together by meteorite impacts. The finer fraction of the regolith (i.e., less than 1 cm) is informally referred to as soil. The soil is probably the most important portion of the regolith for use at a lunar base. For example, soil can be used as insulation against cosmic rays, for lunar ceramics and abodes, or for growing plants. The soil contains abundant solar-wind-implanted elements as well as various minerals, particularly oxide phases, that are of potential economic importance. For example, these components of the soil are sources of oxygen and hydrogen for rocket fuel, helium for nuclear energy, and metals such as Fe, Al, Si, and Ti.

Petrographic characterization of lunar soils: Application of x ray digital-imaging to quantitative and automated analysis

NASA Technical Reports Server (NTRS)

Higgins, Stefan J.; Patchen, Allan; Chambers, John G.; Taylor, Lawrence A.; Mckay, David S.

1994-01-01

The rocks and soils of the moon will be the raw materials for various engineering needs at a lunar base, such as sources of hydrogen, oxygen, metals, etc. The material of choice for most of the bulk needs is the regolith and its less than 1 cm fraction, the soil. For specific mineral resources it may be necessary to concentrate minerals from either rocks or soils. Therefore, quantitative characterizations of these rocks and soils are necessary in order to better define their mineral resource potential. However, using standard point-counting microscopic procedures, it is difficult to quantitatively determine mineral abundances and virtually impossible to obtain data on mineral distributions within grains. As a start to fulfilling these needs, Taylor et al. and Chambers et al. have developed a procedure for characterization of crushed lunar rocks using x ray digital imaging. The development of a similar digital imaging procedure for lunar soils as obtained from a spectrometer is described.

Sensitivity and uncertainty analysis for Abreu & Johnson numerical vapor intrusion model.

PubMed

Ma, Jie; Yan, Guangxu; Li, Haiyan; Guo, Shaohui

2016-03-05

This study conducted one-at-a-time (OAT) sensitivity and uncertainty analysis for a numerical vapor intrusion model for nine input parameters, including soil porosity, soil moisture, soil air permeability, aerobic biodegradation rate, building depressurization, crack width, floor thickness, building volume, and indoor air exchange rate. Simulations were performed for three soil types (clay, silt, and sand), two source depths (3 and 8m), and two source concentrations (1 and 400 g/m(3)). Model sensitivity and uncertainty for shallow and high-concentration vapor sources (3m and 400 g/m(3)) are much smaller than for deep and low-concentration sources (8m and 1g/m(3)). For high-concentration sources, soil air permeability, indoor air exchange rate, and building depressurization (for high permeable soil like sand) are key contributors to model output uncertainty. For low-concentration sources, soil porosity, soil moisture, aerobic biodegradation rate and soil gas permeability are key contributors to model output uncertainty. Another important finding is that impacts of aerobic biodegradation on vapor intrusion potential of petroleum hydrocarbons are negligible when vapor source concentration is high, because of insufficient oxygen supply that limits aerobic biodegradation activities. Copyright © 2015 Elsevier B.V. All rights reserved.

Characterization of soils containing adipocere.

PubMed

Fiedler, S; Schneckenberger, K; Graw, M

2004-11-01

The formation of adipocere (commonly known as grave wax), a spontaneous inhibition of postmortem changes, has been extensively analyzed in forensic science. However, soils in which adipocere formation occurs have never been described in detail. Therefore, this study is intended as a first step in the characterization of soils containing adipocere. Two grave soils (Gleyic Anthrosols) that prevent the timely reuse of graves due to the occurrence of adipocere and a control soil (Gleyic Luvisol) were selected from a cemetery in the Central Black Forest (Southwest Germany). Descriptions of soil morphology and a wide assay of physical, chemical, and microbiologic soil characteristics were accomplished. In contrast to the control soil, the grave soils were characterized by lower bulk density and pH. The degradation of the soil structure caused by digging led to a higher water table and the expansion of the reducing conditions in the graves where the prevalent absence of oxygen in range of the coffins inhibited decomposition processes. Although the formation of adipocere led to the conservation of the buried corpses, phosphorus, dissolved organic carbon, and cadavarine leaching from the graves was observed. Microbial biomass and microbial activity were higher in the control soil and hence reflected the inert character of adipocere. The study results clearly show the need for additional approaches in forensic, pedologic, and microbiologic research.

Impact of Soil Composition and Electrochemistry on Corrosion of Rock-cut Slope Nets along Railway Lines in China.

PubMed

Chen, Jiao; Chen, Zhaoqiong; Ai, Yingwei; Xiao, Jingyao; Pan, Dandan; Li, Wei; Huang, Zhiyu; Wang, Yumei

2015-10-09

Taking the slope of Suiyu Railway to study, the research separately studied soil resistivity, soil electrochemistry (corrosion potential, oxidization reduction potential, electric potential gradient and pH), soil anions (total soluble salt, Cl(-), SO4(2-) and ), and soil nutrition (moisture content, organic matter, total nitrogen, alkali-hydrolysable nitrogen, available phosphorus, and available potassium) at different slope levels, and conducted corrosion grade evaluation on artificial soil according to its single index and comprehensive indexes. Compared with other factors, water has the biggest impact on the corrosion of slope protection net, followed by anion content. Total soluble salt has the moderate impact on the corrosion of slope protection net, and stray current has the moderate impact on the corrosion of mid-slope protection net. Comprehensive evaluation on the corrosive degree of soil samples indicates that the corrosion of upper slope is moderate, and the corrosion of mid-slope and lower slope is strong. Organic matter in soil is remarkably relevant to electric potential gradient. Available nitrogen, available potassium and available phosphorus are remarkably relevant to anions. The distribution of soil nutrient is indirectly relevant to slope type.

Impact of Soil Composition and Electrochemistry on Corrosion of Rock-cut Slope Nets along Railway Lines in China

PubMed Central

Chen, Jiao; Chen, Zhaoqiong; Ai, Yingwei; Xiao, Jingyao; Pan, Dandan; Li, Wei; Huang, Zhiyu; Wang, Yumei

2015-01-01

Taking the slope of Suiyu Railway to study, the research separately studied soil resistivity, soil electrochemistry (corrosion potential, oxidization reduction potential, electric potential gradient and pH), soil anions (total soluble salt, Cl−, SO42− and ), and soil nutrition (moisture content, organic matter, total nitrogen, alkali-hydrolysable nitrogen, available phosphorus, and available potassium) at different slope levels, and conducted corrosion grade evaluation on artificial soil according to its single index and comprehensive indexes. Compared with other factors, water has the biggest impact on the corrosion of slope protection net, followed by anion content. Total soluble salt has the moderate impact on the corrosion of slope protection net, and stray current has the moderate impact on the corrosion of mid-slope protection net. Comprehensive evaluation on the corrosive degree of soil samples indicates that the corrosion of upper slope is moderate, and the corrosion of mid-slope and lower slope is strong. Organic matter in soil is remarkably relevant to electric potential gradient. Available nitrogen, available potassium and available phosphorus are remarkably relevant to anions. The distribution of soil nutrient is indirectly relevant to slope type. PMID:26450811

Toxic Chemicals in the Soil Environment. Volume 1. Chemical Properties and Characterization of Soils

DTIC Science & Technology

1985-06-01

ORGANIZATION NAME 4,ND ADJR$55 10. PROGRAM ELEMENT, PROJECT, TASK AREA I WORK UNIT NUMBERS I’t iso.:m - w.XI okla’ýoria t~t { iti i’.water, &’ k 1...and relative sizes of ions commonly occurring in phyllosilicates ... ....... .... 12 The tet:ahedron formed by coordination of Si by four oxvgens...12 3 The octahedron formed by coordination of a cation by six oxygens ................. ...... . . 13 4 Linked Si 60 rings

Effects of biochar and elevated soil temperature on soil microbial activity and abundance in an agricultural system

NASA Astrophysics Data System (ADS)

Bamminger, Chris; Poll, Christian; Marhan, Sven

2014-05-01

As a consequence of Global Warming, rising surface temperatures will likely cause increased soil temperatures. Soil warming has already been shown to, at least temporarily, increase microbial activity and, therefore, the emissions of greenhouse gases like CO2 and N2O. This underlines the need for methods to stabilize soil organic matter and to prevent further boost of the greenhouse gas effect. Plant-derived biochar as a soil amendment could be a valuable tool to capture CO2 from the atmosphere and sequestrate it in soil on the long-term. During the process of pyrolysis, plant biomass is heated in an oxygen-low atmosphere producing the highly stable solid matter biochar. Biochar is generally stable against microbial degradation due to its chemical structure and it, therefore, persists in soil for long periods. Previous experiments indicated that biochar improves or changes several physical or chemical soil traits such as water holding capacity, cation exchange capacity or soil structure, but also biotic properties like microbial activity/abundance, greenhouse gas emissions and plant growth. Changes in the soil microbial abundance and community composition alter their metabolism, but likely also affect plant productivity. The interaction of biochar addition and soil temperature increase on soil microbial properties and plant growth was yet not investigated on the field scale. To investigate whether warming could change biochar effects in soil, we conducted a field experiment attached to a soil warming experiment on an agricultural experimental site near the University of Hohenheim, already running since July 2008. The biochar field experiment was set up as two-factorial randomized block design (n=4) with the factors biochar amendment (0, 30 t ha-1) and soil temperature (ambient, elevated=ambient +2.5° C) starting from August 2013. Each plot has a dimension of 1x1m and is equipped with combined soil temperature and moisture sensors. Slow pyrolysis biochar from the C4 plant Miscanthus was first put on top and then manually incorporated into 20-30 cm soil depth. Differences in the isotopic signature of the biochar and the soil organic matter make it possible to trace the flow of biochar-derived carbon into different labile C pools such as CO2 or microbial biomass. Spring barley litter of the previous growing season was mixed into soil together with the biochar. Rapeseed oil plants were sown one week after biochar application. Weekly gas sampling between the crop rows allows the determination of CO2, N2O and CH4 fluxes. In addition, 13CO2 will be measured at specific dates in order to calculate the proportion of biochar-C in emitted CO2. First soil sampling after biochar application was in November 2013 and soil was taken in three depths (0-5, 5-15 and 15-30 cm). After the first three months we could not observe any effect of biochar on CO2 and N2O emissions, but elevated soil temperature increased emissions of both gases. Data on soil microbial abundance and community composition will be available soon.

Soil bacterial and fungal diversity differently correlated with soil biochemistry in alpine grassland ecosystems in response to environmental changes.

PubMed

Zhang, Yong; Dong, Shikui; Gao, Qingzhu; Liu, Shiliang; Ganjurjav, Hasbagan; Wang, Xuexia; Su, Xukun; Wu, Xiaoyu

2017-03-06

To understand effects of soil microbes on soil biochemistry in alpine grassland ecosystems under environmental changes, we explored relationships between soil microbial diversity and soil total nitrogen, organic carbon, available nitrogen and phosphorus, soil microbial biomass and soil enzyme activities in alpine meadow, alpine steppe and cultivated grassland on the Qinghai-Tibetan plateau under three-year warming, enhanced precipitation and yak overgrazing. Soil total nitrogen, organic carbon and NH 4 -N were little affected by overgrazing, warming or enhanced precipitation in three types of alpine grasslands. Soil microbial biomass carbon and phosphorus along with the sucrase and phosphatase activities were generally stable under different treatments. Soil NO 3 -N, available phosphorus, urease activity and microbial biomass nitrogen were increased by overgrazing in the cultivated grassland. Soil bacterial diversity was positively correlated with, while soil fungal diversity negatively with soil microbial biomass and enzyme activities. Soil bacterial diversity was negatively correlated with, while soil fungal diversity positively with soil available nutrients. Our findings indicated soil bacteria and fungi played different roles in affecting soil nutrients and microbiological activities that might provide an important implication to understand why soil biochemistry was generally stable under environmental changes in alpine grassland ecosystems.

Soil bacterial and fungal diversity differently correlated with soil biochemistry in alpine grassland ecosystems in response to environmental changes

NASA Astrophysics Data System (ADS)

Zhang, Yong; Dong, Shikui; Gao, Qingzhu; Liu, Shiliang; Ganjurjav, Hasbagan; Wang, Xuexia; Su, Xukun; Wu, Xiaoyu

2017-03-01

To understand effects of soil microbes on soil biochemistry in alpine grassland ecosystems under environmental changes, we explored relationships between soil microbial diversity and soil total nitrogen, organic carbon, available nitrogen and phosphorus, soil microbial biomass and soil enzyme activities in alpine meadow, alpine steppe and cultivated grassland on the Qinghai-Tibetan plateau under three-year warming, enhanced precipitation and yak overgrazing. Soil total nitrogen, organic carbon and NH4-N were little affected by overgrazing, warming or enhanced precipitation in three types of alpine grasslands. Soil microbial biomass carbon and phosphorus along with the sucrase and phosphatase activities were generally stable under different treatments. Soil NO3-N, available phosphorus, urease activity and microbial biomass nitrogen were increased by overgrazing in the cultivated grassland. Soil bacterial diversity was positively correlated with, while soil fungal diversity negatively with soil microbial biomass and enzyme activities. Soil bacterial diversity was negatively correlated with, while soil fungal diversity positively with soil available nutrients. Our findings indicated soil bacteria and fungi played different roles in affecting soil nutrients and microbiological activities that might provide an important implication to understand why soil biochemistry was generally stable under environmental changes in alpine grassland ecosystems.

Soil bacterial and fungal diversity differently correlated with soil biochemistry in alpine grassland ecosystems in response to environmental changes

PubMed Central

Zhang, Yong; Dong, Shikui; Gao, Qingzhu; Liu, Shiliang; Ganjurjav, Hasbagan; Wang, Xuexia; Su, Xukun; Wu, Xiaoyu

2017-01-01

To understand effects of soil microbes on soil biochemistry in alpine grassland ecosystems under environmental changes, we explored relationships between soil microbial diversity and soil total nitrogen, organic carbon, available nitrogen and phosphorus, soil microbial biomass and soil enzyme activities in alpine meadow, alpine steppe and cultivated grassland on the Qinghai-Tibetan plateau under three-year warming, enhanced precipitation and yak overgrazing. Soil total nitrogen, organic carbon and NH4-N were little affected by overgrazing, warming or enhanced precipitation in three types of alpine grasslands. Soil microbial biomass carbon and phosphorus along with the sucrase and phosphatase activities were generally stable under different treatments. Soil NO3-N, available phosphorus, urease activity and microbial biomass nitrogen were increased by overgrazing in the cultivated grassland. Soil bacterial diversity was positively correlated with, while soil fungal diversity negatively with soil microbial biomass and enzyme activities. Soil bacterial diversity was negatively correlated with, while soil fungal diversity positively with soil available nutrients. Our findings indicated soil bacteria and fungi played different roles in affecting soil nutrients and microbiological activities that might provide an important implication to understand why soil biochemistry was generally stable under environmental changes in alpine grassland ecosystems. PMID:28262753

Plant Survival in a Changing Environment: The Role of Nitric Oxide in Plant Responses to Abiotic Stress

PubMed Central

Simontacchi, Marcela; Galatro, Andrea; Ramos-Artuso, Facundo; Santa-María, Guillermo E.

2015-01-01

Nitric oxide in plants may originate endogenously or come from surrounding atmosphere and soil. Interestingly, this gaseous free radical is far from having a constant level and varies greatly among tissues depending on a given plant’s ontogeny and environmental fluctuations. Proper plant growth, vegetative development, and reproduction require the integration of plant hormonal activity with the antioxidant network, as well as the maintenance of concentration of reactive oxygen and nitrogen species within a narrow range. Plants are frequently faced with abiotic stress conditions such as low nutrient availability, salinity, drought, high ultraviolet (UV) radiation and extreme temperatures, which can influence developmental processes and lead to growth restriction making adaptive responses the plant’s priority. The ability of plants to respond and survive under environmental-stress conditions involves sensing and signaling events where nitric oxide becomes a critical component mediating hormonal actions, interacting with reactive oxygen species, and modulating gene expression and protein activity. This review focuses on the current knowledge of the role of nitric oxide in adaptive plant responses to some specific abiotic stress conditions, particularly low mineral nutrient supply, drought, salinity and high UV-B radiation. PMID:26617619

Methane oxidation and formation of EPS in compost: effect of oxygen concentration.

PubMed

Wilshusen, J H; Hettiaratchi, J P A; De Visscher, A; Saint-Fort, R

2004-05-01

Oxygen concentration plays an important role in the regulation of methane oxidation and the microbial ecology of methanotrophs. However, this effect is still poorly quantified in soil and compost ecosystems. The effect of oxygen on the formation of exopolymeric substances (EPS) is as yet unknown. We studied the effect of oxygen on the evolution of methanotrophic activity. At both high and low oxygen concentrations, peak activity was observed twice within a period of 6 months. Phospholipid fatty acid analysis showed that there was a shift from type I to type II methanotrophs during this period. At high oxygen concentration, EPS production was about 250% of the amount at low oxygen concentration. It is hypothesized that EPS serves as a carbon cycling mechanism for type I methanotrophs when inorganic nitrogen is limiting. Simultaneously, EPS stimulates nitrogenase activity in type II methanotrophs by creating oxygen-depleted zones. The kinetic results were incorporated in a simulation model for gas transport and methane oxidation in a passively aerated biofilter. Comparison between the model and experimental data showed that, besides acting as a micro-scale diffusion barrier, EPS can act as a barrier to macro-scale diffusion, reducing the performance of such biofilters.

Analysis of the coexisting pathways for NO and N2O formation in Chernozem using the (15)N-tracer SimKIM-Advanced model.

PubMed

Stange, Claus Florian; Spott, Oliver; Russow, Rolf

2013-01-01

The nitrogen (N) cycle consists of a variety of microbial processes. These processes often occur simultaneously in soils, but respond differently to local environmental conditions due to process-specific biochemical restrictions (e.g. oxygen levels). Hence, soil nitrogen cycling (e.g. soil N gas production through nitrification and denitrification) is individually affected through these processes, resulting in the complex and highly dynamic behaviour of total soil N turnover. The development and application of methods that facilitate the quantification of individual contributions of coexisting processes is a fundamental prerequisite for (i) understanding the dynamics of soil N turnover and (ii) implementing these processes in ecosystem models. To explain the unexpected results of the triplet tracer experiment (TTE) of Russow et al. (Role of nitrite and nitric oxide in the processes of nitrification and denitrification in soil: results from (15)N tracer experiments. Soil Biol Biochem. 2009;41:785-795) the existing SimKIM model was extended to the SimKIM-Advanced model through the addition of three separate nitrite subpools associated with ammonia oxidation, oxidation of organic nitrogen (Norg), and denitrification, respectively. For the TTE, individual treatments with (15)N ammonium, (15)N nitrate, and (15)N nitrite were conducted under oxic, hypoxic, and anoxic conditions, respectively, to clarify the role of nitric oxide as a denitrification intermediate during N2O formation. Using a split nitrite pool, this analysis model explains the observed differences in the (15)N enrichments in nitric oxide (NO) and nitrous oxide (N2O) which occurred in dependence on different oxygen concentrations. The change from oxic over hypoxic to anoxic conditions only marginally increased the NO and N2O release rates (1.3-fold). The analysis using the model revealed that, under oxic and hypoxic conditions, Norg-based N2O production was the dominant pathway, contributing to 90 and 50 % of the total soil N2O release. Under anoxic conditions, denitrification was the dominant process for soil N2O release. The relative contribution of Norg to the total soil NO release was small. Ammonia oxidation served as the major pathway of soil NO release under oxic and hypoxic conditions, while denitrification was dominant under anoxic conditions. The model parameters for soil with moderate soil organic matter (SOM) content were not scalable to an additional data set for soil with higher SOM content, indicating a strong influence of SOM content on microbial N turnover. Thus, parameter estimation had to be re-calculated for these conditions, highlighting the necessity of individual soil-dependent parameter estimations.

Regolith Evolved Gas Analyzer

NASA Technical Reports Server (NTRS)

Hoffman, John H.; Hedgecock, Jud; Nienaber, Terry; Cooper, Bonnie; Allen, Carlton; Ming, Doug

2000-01-01

The Regolith Evolved Gas Analyzer (REGA) is a high-temperature furnace and mass spectrometer instrument for determining the mineralogical composition and reactivity of soil samples. REGA provides key mineralogical and reactivity data that is needed to understand the soil chemistry of an asteroid, which then aids in determining in-situ which materials should be selected for return to earth. REGA is capable of conducting a number of direct soil measurements that are unique to this instrument. These experimental measurements include: (1) Mass spectrum analysis of evolved gases from soil samples as they are heated from ambient temperature to 900 C; and (2) Identification of liberated chemicals, e.g., water, oxygen, sulfur, chlorine, and fluorine. REGA would be placed on the surface of a near earth asteroid. It is an autonomous instrument that is controlled from earth but does the analysis of regolith materials automatically. The REGA instrument consists of four primary components: (1) a flight-proven mass spectrometer, (2) a high-temperature furnace, (3) a soil handling system, and (4) a microcontroller. An external arm containing a scoop or drill gathers regolith samples. A sample is placed in the inlet orifice where the finest-grained particles are sifted into a metering volume and subsequently moved into a crucible. A movable arm then places the crucible in the furnace. The furnace is closed, thereby sealing the inner volume to collect the evolved gases for analysis. Owing to the very low g forces on an asteroid compared to Mars or the moon, the sample must be moved from inlet to crucible by mechanical means rather than by gravity. As the soil sample is heated through a programmed pattern, the gases evolved at each temperature are passed through a transfer tube to the mass spectrometer for analysis and identification. Return data from the instrument will lead to new insights and discoveries including: (1) Identification of the molecular masses of all of the gases liberated from heated soil samples; (2) Identification of the asteroid soil mineralogy to aid in the selection process for returned samples; (3) Existence of oxygen in the asteroid soil and the potential for in-situ resource utilization (ISRU); and (4) Existence of water and other volatiles in the asteroid soil. Additional information is contained in the original extended abstract.

[Changes of soil nutrient contents after prescribed burning of forestland in Heshan City, Guangdong Province].

PubMed

Sun, Yu-xin; Wu, Jian-ping; Zhou, Li-xia; Lin, Yong-biao; Fu, Sheng-lei

2009-03-01

A comparative study was conducted to analyze the changes of soil nutrient contents in Eucalyptus forestland and in shrubland after three years of prescribed burning. In Eucalyptus forestland, soil organic carbon, total nitrogen, available potassium contents and soil pH decreased significantly; soil available phosphorus and exchangeable magnesium contents, net nitrogen mineralization rate and ammonification rate also decreased but showed no significant difference. In shrubland, soil exchangeable calcium content increased significantly, but the contents of other nutrients had no significant change. The main reason of the lower soil net nitrogen mineralization rate in Eucalyptus forest could be the decrease of available substrates and the uptake of larger amount of soil nutrients by the fast growth of Eucalyptus. The soil nutrients in shrubland had a quick restoration rate after burning.

Amelioration of an acidic ultisol by straw-derived biochars combined with dicyandiamide under application of urea.

PubMed

Mehmood, Khalid; Li, Jiu-Yu; Jiang, Jun; Shi, Ren-Yong; Liu, Zhao-Dong; Xu, Ren-Kou

2017-03-01

The rapid increase in agricultural pollution demands judicious use of inputs and outputs for sustainable crop production. Crop straws were pyrolyzed under oxygen-limited conditions at 400 °C for 2 h to prepare peanut straw biochar (PB), canola straw biochar (CB), and wheat straw biochar (WB). Then, 300-g soils were incubated each with urea nitrogen (UN) and UN + biochars with or without dicyandiamide (DCD) for 60 days. During the incubations, soil acidification induced by urea was somewhat inhibited by biochars, but nitrification of hydrolyzed NH 4 + produced much more acidity than the neutralization potential of the biochars. In single UN (200 mg/kg) treatment, soil pH decreased drastically and the final pH after incubation was lower than the control. Antagonistic to UN, all three biochars neutralized the soil acidity, which was consistent to their inherent alkalinity. DCD inhibited nitrification which was obvious throughout the incubations, as 30 mg/kg DCD + 200 mg/kg UN combined with 1  % PB, CB, and WB retained 0.94, 0.79, and 1.19 units higher pH, respectively, and significantly reduced exchangeable acidity over the treatments without DCD (P < 0.05). The treatments of UN + biochars with and without DCD had highly significant effects on soil pH, exchangeable Al 3+ , NH 4 + -N, (NO 3 - +NO 2 - )-N, and available P (P < 0.05). Amplified NH 4 + -N retentions at higher rates of PB referred increased negatively charged sites for nutrient adsorptions. Applied UN transformations varied among different treatments, and the maximum amounts of total mineral N recovered were 218.3, 218.5, and 223.8 mg/kg in the presence of DCD by PB, CB, and WB, compared to 198.2, 201.6, and 205.2 mg/kg, respectively, in no DCD treatments. Urea induced severe soil acidification and even lowered the ameliorative effects of applied biochars. Thus, ammonium-based fertilizers must include nitrification inhibitor (DCD) and, if used in combination with biochars will offer a suitable choice to reduce the acidity, improve base saturation and fertility of soil for sustainable agriculture.

A model of late quaternary landscape development in the Delaware Valley, New Jersey and Pennsylvania

USGS Publications Warehouse

Ridge, J.C.; Evenson, E.B.; Sevon, W.D.

1992-01-01

In the Delaware Valley of New Jersey and eastern Pennsylvania the late Quaternary history of colluviation, fluvial adjustment, and soil formation is based on the ages of pre-Wisconsinan soils and glacial deposits which are indicated by feld relationships and inferred from mid-latitude climate changes indicated by marine oxygen-isotope records. The area is divided into four terranes characterized by sandstone, gneiss, slate and carbonate rocks. Since the last pre-Wisconsinan glaciation (> 130 ka, inferred to be late Illinoian), each terrane responded differently to chemical and mechanical weathering. During the Sangamon interglacial stage (??? 130-75 ka) in situ weathering is inferred to have occurred at rates greater than transportation of material which resulted in the formation of deep, highly weathered soil and saprolite, and dissolution of carbonate rocks. Cold climatic conditions during the Wisconsinan, on the other hand, induced erosion of the landscape at rates faster than soil development. Upland erosion during the Wisconsinan removed pre-Wisconsinan soil and glacial sediment and bedrock to produce muddy to blocky colluvium, gre??zes lite??es, and alluvial fans on footslopes. Fluvial gravel and overlying colluvium in the Delaware Valley, both buried by late Wisconsinan outwash, are inferred to represent episodes of early and middle Wisconsinan (??? 75-25 ka) upland erosion and river aggradiation followed by river degradation and colluvium deposition. Early-middle Wisconsinan colluvium is more voluminous than later colluvium despite colder, possibly permafrost conditions during the late Wisconsinan ??? 25-10 ka). Extensive colluviation during the early and middle Wisconsinan resulted from a longer (50 kyr), generally cold interval of erosion with a greater availability of easily eroded pre-Wisconsinan surficial materials on uplands than during the late Wisconsinan. After recession of late Wisconsinan ice from its terminal position, soil formation and landscape stability were delayed until the Holocene by a lingering cold climate, slope erosion, colluvium and alluvial fan deposition, and eolian sedimentation. Late Quaternary erosion in the Delaware Valley was dominated by glacial and periglacial processes during glacial stages. During the warm interglacial stages, soils developed on a more stable landscape. These souls were easily colluviated by periglacial erosion during periods of intermittent cold climate. ?? 1992.

Cascading effects of predator-detritivore interactions depend on environmental context in a Tibetan alpine meadow.

PubMed

Wu, Xinwei; Griffin, John N; Sun, Shucun

2014-05-01

Studies of grazing food webs show that species traits can interact with environmental factors to determine the strength of trophic cascades, but analogous context dependencies in detrital food webs remain poorly understood. In predator-detritivore-plant interaction chains, predators are expected to indirectly suppress plant biomass by reducing the density of plant-facilitating detritivores. However, this outcome can be reversed where above-ground predators drive burrowing detritivores to lower soil levels, strengthening their plant-facilitating effects. Here, we show that these trait-mediated indirect interactions further depend on environmental context in a Tibetan alpine meadow. In our study system, undulating topography generates higher (dry soil) patches interspersed with lower (wet soil) patches. Because the ability of detritivores to form deep burrows is likely to be limited by oxygen availability in low patches (wet soil), we hypothesized that (i) burrowing detritivores would undergo a vertical habitat shift, allowing them to more effectively avoid predation, in high - but not low - patches, and (ii) this shift would transmit positive effects of predators to plants in high patches by improving conditions in the lower soil layer. We tested these hypotheses using complementary field and glasshouse experiments examining whether the cascading effects of above-ground predatory beetles (presence/absence) on the density and behaviour of tunnel-forming detritivorous beetles, soil properties, and plant growth varied with patch type (low/high). Results revealed that predatory beetles did not reduce the density of detritivores in either patch type but had context-dependent trait-mediated effects, increasing the tunnelling depth of detritivores, improving soil conditions and ultimately increasing plant biomass in the high but not low patches. This study adds to an emerging predictive framework linking predators to plants in detritus food webs, demonstrating that these indirect interactions depend not just on the relative habitat domains of predators and prey, but also on environmental conditions that can predictably constrain the behavioural response of detritivores to predation risk. © 2013 The Authors. Journal of Animal Ecology © 2013 British Ecological Society.

[Convertibility of the data determined by ICP-AES and FAAS for soil available K and Na].

PubMed

Zhang, Jian-min; Wang, Meng; Ge, Xiao-ping; Wu, Jian-zhi; Ge, Ying; Li, Shi-peng; Chang, Jie

2009-05-01

In recent years, inductively coupled plasma atomic emission spectrometry (ICP-AES) have been commonly used to determine the soil available K and Na with the extraction solution of HCl-H2SO4, while previous data of soil available K and Na were measured by flame atomic absorption spectrometry (FAAS) with the extraction solution of NH4OAc. In order to utilize previous data, quest for the convertibility of the data determined by ICP-AES and FAAS, and compare the data determined by both methods, the authors chose four types of soil to determine soil available K and Na by ICP-AES and FAAS, respectively. Four types of soil represent grit soil, clay, silt from river and silt from sea, respectively. Soil samples included four types of soil and these samples represent different soil nutrition. The authors analyzed the correlations of two kinds of measured data. The paired samples t-test proves that there was significantly positively correlation between these two methods. The correlation coefficient of the data between these two methods for measuring soil available K is 0.98. The results of soil available K determined by the two methods can be conversed through the formula, y = l.14x + 6.53 (R2 = 0.91, n=24, p < 0.001). As for Na, although there is a significantly positively correlation between these two methods, the slopes of single model of clay and grit soil were different from that of general model. And so the results determined by the two methods can be conversed through different formula according to the types of soil, that is, for clay: y = l.23x + 10.03; for grit soil: y = 3.12x - 23.03; for silt: y = 0.60x. In conclusion, the authors' results showed that previous data of available K and Na measured by FAAS with the extraction solution of NH4OAc were available. And these data were comparable to the data measured by ICP-AES through definite formula The authors' results also suggested that ICP-AES was preferable when many elements were measured at the same time. Under this condition, ICP-AES was economical, efficient and reliable.

Effect of Soil Type and Moisture Availability on the Foraging Behavior of the Formosan Subterranean Termite (Isoptera: Rhinotermitidae)

USDA-ARS?s Scientific Manuscript database

This study examined the influence of soil type and moisture availability on termite foraging behavior. Physical properties of the soil affected both tunneling behavior and mud tube construction. Termites tunneled through sand faster than top soil and clay. In containers with top soil and clay, termi...

Moisture and substrate availability constrain soil trace gas fluxes in an eastern Amazonian regrowth forest

NASA Astrophysics Data System (ADS)

Vasconcelos, Steel S.; Zarin, Daniel J.; Capanu, Marinela; Littell, Ramon; Davidson, Eric A.; Ishida, Francoise Y.; Santos, Elisana B.; Araújo, Maristela M.; AragãO, DéBora V.; Rangel-Vasconcelos, LíVia G. T.; de Assis Oliveira, Francisco; McDowell, William H.; de Carvalho, Claudio José R.

2004-06-01

Changes in land-use and climate are likely to alter moisture and substrate availability in tropical forest soils, but quantitative assessment of the role of resource constraints as regulators of soil trace gas fluxes is rather limited. The primary objective of this study was to quantify the effects of moisture and substrate availability on soil trace gas fluxes in an Amazonian regrowth forest. We measured the efflux of carbon dioxide (CO2), nitric oxide (NO), nitrous oxide (N2O), and methane (CH4) from soil in response to two experimental manipulations. In the first, we increased soil moisture availability during the dry season by irrigation; in the second, we decreased substrate availability by continuous removal of aboveground litter. In the absence of irrigation, soil CO2 efflux decreased during the dry season while irrigation maintained soil CO2 efflux levels similar to the wet season. Large variations in soil CO2 efflux consistent with a significant moisture constraint on respiration were observed in response to soil wet-up and dry-down events. Annual soil C efflux for irrigated plots was 27 and 13% higher than for control plots in 2001 and 2002, respectively. Litter removal significantly reduced soil CO2 efflux; annual soil C efflux in 2002 was 28% lower for litter removal plots compared to control plots. The annual soil C efflux:litterfall C ratio for the control treatment (4.0-5.2) was consistent with previously reported values for regrowth forests that indicate a relatively large belowground C allocation. In general, fluxes of N2O and CH4 were higher during the wet season and both fluxes increased during dry-season irrigation. There was no seasonal effect on NO fluxes. Litter removal had no significant impact on N oxide or CH4 emissions. Net soil nitrification did not respond to dry-season irrigation, but was somewhat reduced by litter removal. Overall, these results demonstrate significant soil moisture and substrate constraints on soil trace gas emissions, particularly for CO2, and suggest that climate and land-use changes that alter moisture and substrate availability are therefore likely to have an impact on atmosphere chemistry.

Electrical Resistivity Tomography Monitoring of Soil Remediation for a Garbage Dump

NASA Astrophysics Data System (ADS)

shi, X.; Luo, Z.; Zhang, Y.; Fu, Q.; Xu, Z.

2011-12-01

Electrical resistivity tomography (ERT) survey was firstly used to investigate the distribution of contaminated soil in a garbage dump area, Wuhan city, China. The result shows that sulfated soil resistivity is about 4 to 7 ohm-m, which is relatively lower than normal soil resistivity of about 15 to 25 ohm-m. The distribution of contaminated soil was delineated using ERT images. Then, ERT survey was carried out in this area for monitoring of remediation of contaminated soil and groundwater. Werner measurements with 60 electrodes of 1 m spacing were taken during the 9-well oxygen injection and nutrition liquid injection period. The difference of apparent resistivity between before gas injection and after gas injection was used to delineate the channel of gas and the trace of gas migration in the porous garbage dump. The electrical resitivity changes between before and after nutrition liquid injection were used to analyze the liquid migration and distribution. The dynamic procedures of gas and water migration are outlined. The results suggest that ERT is a powerful technique for monitoring of soil remediation.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brownlow, D.T.; Escude, S.; Johanneson, O.H.

The 1500 Area at Kelly Air Force Base (AFB) was the site of a subsurface release of approximately 1,000 gallons of JP-4 jet fuel. Preliminary studies found evidence of hydrocarbon contamination extending from 10 feet below ground surface (bgs) down to the shallow water table, at 20 to 25 feet bgs. In June of 1993, Kelly AFB authorized the installation and evaluation of a bioventing system at this site to aid in the cleanup of the hydrocarbon contaminated soils. The purpose of the bioventing system is to aerate subsurface soils within and immediately surrounding the release area, in order tomore » stimulate in-situ biological activity and enhance the natural bioremediation capacity of the soil. Augmenting oxygen to the indigenous soil microorganisms promotes the aerobic metabolism of fuel hydrocarbons in the soil. In vadose zone soils exhibiting relatively good permeability, bioventing has proven to be a highly cost effective remediation technology for treating fuel contaminated soils. In November, 1993, a Start-Up Test program consisting of an In-Situ Respiration Test (ISRT) and an Air Permeability Test was performed at the 1500 Area Spill Site.« less

Sand amendment enhances bioelectrochemical remediation of petroleum hydrocarbon contaminated soil.

PubMed

Li, Xiaojing; Wang, Xin; Ren, Zhiyong Jason; Zhang, Yueyong; Li, Nan; Zhou, Qixing

2015-12-01

Bioelectrochemical system is an emerging technology for the remediation of soils contaminated by petroleum hydrocarbons. However, performance of such systems can be limited by the inefficient mass transport in soil. Here we report a new method of sand amendment, which significantly increases both oxygen and proton transports, resulting to increased soil porosity (from 44.5% to 51.3%), decreased Ohmic resistance (by 46%), and increased charge output (from 2.5 to 3.5Cg(-1)soil). The degradation rates of petroleum hydrocarbons increased by up to 268% in 135d. The degradation of n-alkanes and polycyclic aromatic hydrocarbons with high molecular weight was accelerated, and denaturing gradient gel electrophoresis showed that the microbial community close to the air-cathode was substantially stimulated by the induced current, especially the hydrocarbon degrading bacteria Alcanivorax. The bioelectrochemical stimulation imposed a selective pressure on the microbial community of anodes, including that far from the cathode. These results suggested that sand amendment can be an effective approach for soil conditioning that will enhances the bioelectrochemical removal of hydrocarbons in contaminated soils. Copyright © 2015 Elsevier Ltd. All rights reserved.

Spatial Variation in Anaerobic Microbial Communities in Wetland Margin Soils

NASA Astrophysics Data System (ADS)

Rich, H.; Kannenberg, S.; Ludwig, S.; Nelson, L. C.; Spawn, S.; Porterfield, J.; Schade, J. D.

2012-12-01

Climate change is predicted to increase the severity and frequency of precipitation and drought events, which may result in substantial temporal variation in the size of wetlands. Wetlands are the world's largest natural emitter of methane, a greenhouse gas that is 20 times more effective at trapping heat than carbon dioxide. Changes in the dynamics of wetland size may lead to changes in the extent and timing of inundation of soils in ephemeral margins, which is likely to influence microbes that rely on anoxic conditions. The impact on process rates may depend on the structure of the community of microbes present in the soil, however, the link between microbial structure and patterns in process rates in soils is not well understood. Our goal was to use molecular techniques to compare microorganism communities in two wetlands that differ in the extent and duration of inundation of marginal soils to assess how these communities may change with changes in climate, and the potential consequences for methane production. This will allow us to examine how community composition changes with soil conditions such as moisture content, frequency of drought and abundance of available carbon. The main focus of this project was to determine the presence or absence of acetoclastic (AC) and hydrogenotrophic (HT) methanogens. AC methanogens use acetate as their main substrate, while HT methanogens use Hydrogen and Carbon dioxide. The relative proportion of these pathways depends on soil conditions, such as competition with other anaerobic microbes and the amount of labile carbon, and spatial patterns in the presence of each can give insight into the soil conditions of a wetland site. We sampled soil from three different wetland ponds of varying permanence in the St Olaf Natural Lands in Northfield, Minnesota, and extracted DNA from these soil samples with a MoBio PowerSoil DNA Isolation Kit. With PCR and seven different primer sets, we tested the extracted DNA for the presence of four different methanogen taxa as well as denitrifying, iron reducing and sulfate reducing bacteria. We used the percentage of soil replicates that tested positive for a primer as an indicator of the population size of each microorganism at each site. The results of the presence/absence test suggested a relationship between soil moisture and abundance of methanogens. The sites with over 25% moisture content showed a higher percent presence than the soil sites with under 25% moisture content for all taxa except for sulfate reducing bacteria. The impact of soil moisture is likely due to negative effects of oxygen on methanogens. However, the presence of methanogens in drier soils shows that methanogens can still exist in a dormant state in aerobic environments. Methanogens may be ubiquitous but vary in population size and activity depending on soil conditions. With changes in wetland soil moisture in response to changes in precipitation patterns, the populations of methanogens may change, affecting the amount of methane production and ultimately the amount of heat trapped by the atmosphere.

Nitrogen enrichment regulates calcium sources in forests

USGS Publications Warehouse

Hynicka, Justin D.; Pett-Ridge, Julie C.; Perakis, Steven

2016-01-01

Nitrogen (N) is a key nutrient that shapes cycles of other essential elements in forests, including calcium (Ca). When N availability exceeds ecosystem demands, excess N can stimulate Ca leaching and deplete Ca from soils. Over the long term, these processes may alter the proportion of available Ca that is derived from atmospheric deposition vs. bedrock weathering, which has fundamental consequences for ecosystem properties and nutrient supply. We evaluated how landscape variation in soil N, reflecting long-term legacies of biological N fixation, influenced plant and soil Ca availability and ecosystem Ca sources across 22 temperate forests in Oregon. We also examined interactions between soil N and bedrock Ca using soil N gradients on contrasting basaltic vs. sedimentary bedrock that differed 17-fold in underlying Ca content. We found that low-N forests on Ca-rich basaltic bedrock relied strongly on Ca from weathering, but that soil N enrichment depleted readily weatherable mineral Ca and shifted forest reliance toward atmospheric Ca. Forests on Ca-poor sedimentary bedrock relied more consistently on atmospheric Ca across all levels of soil N enrichment. The broad importance of atmospheric Ca was unexpected given active regional uplift and erosion that are thought to rejuvenate weathering supply of soil minerals. Despite different Ca sources to forests on basaltic vs. sedimentary bedrock, we observed consistent declines in plant and soil Ca availability with increasing N, regardless of the Ca content of underlying bedrock. Thus, traditional measures of Ca availability in foliage and soil exchangeable pools may poorly reflect long-term Ca sources that sustain soil fertility. We conclude that long-term soil N enrichment can deplete available Ca and cause forests to rely increasingly on Ca from atmospheric deposition, which may limit ecosystem Ca supply in an increasingly N-rich world.

A comparison of methods for determining soil water availability in two sites in Panama with similar rainfall but distinct tree communities

Treesearch

Thomas A. Kursar; Bettina M. J. Engelbrecht; Melvin T. Tyree

2005-01-01

Plant productivity, distribution and diversity in tropical rain forests correlate with water availability. Water availability is determined by rainfall and also by the available water capacity of the soil. However, while rainfall is recognized as important, linkages between plant distribution and differences among soils in available water capacity have not been...

Sulfate-reducing bacteria in rice field soil and on rice roots.

PubMed

Wind, T; Stubner, S; Conrad, R

1999-05-01

Rice plants that were grown in flooded rice soil microcosms were examined for their ability to exhibit sulfate reducing activity. Washed excised rice roots showed sulfate reduction potential when incubated in anaerobic medium indicating the presence of sulfate-reducing bacteria. Rice plants, that were incubated in a double-chamber (phylloshpere and rhizosphere separated), showed potential sulfate reduction rates in the anoxic rhizosphere compartment. These rates decreased when oxygen was allowed to penetrate through the aerenchyma system of the plants into the anoxic root compartment, indicating that sulfate reducers on the roots were partially inhibited by oxygen or that sulfate was regenerated by oxidation of reduced S-compounds. The potential activity of sulfate reducers on rice roots was consistent with MPN enumerations showing that H2-utilizing sulfate-reducing bacteria were present in high numbers on the rhizoplane (4.1 x 10(7) g-1 root fresh weight) and in the adjacent rhizosperic soil (2.5 x 10(7) g-1 soil dry weight). Acetate-oxidizing sulfate reducers, on the other hand, showed highest numbers in the unplanted bulk soil (1.9 x 10(6) g-1 soil dry weight). Two sulfate reducing bacteria were isolated from the highest dilutions of the MPN series and were characterized physiologically and phylogenetically. Strain F1-7b which was isolated from the rhizoplane with H2 as electron donor was related to subgroup II of the family Desulfovibrionaceae. Strain EZ-2C2, isolated from the rhizoplane on acetate, grouped together with Desulforhabdus sp. and Syntrophobacter wolinii. Other strains of sulfate-reducing bacteria originated from bulk soil of rice soil microcosms and were isolated using different electron donors. From these isolates, strains R-AcA1, R-IbutA1, R-PimA1 and R-AcetonA170 were Gram-positive bacteria which were affiliated with the genus Desulfotomaculum. The other isolates were members of subgroup II of the Desulfovibrionaceae (R-SucA1 and R-LacA1), were related to Desulforhabdus sp. (strain BKA11), Desulfobulbus (R-PropA1), or culstered between Desulfobotulus sapovorans and Desulfosarcina variabilis (R-ButA1 and R-CaprA1).

Short-term changes of metal availability in soil. Part I: comparing sludge-amended with metal-spiked soils.

PubMed

Natal-da-Luz, T; Ojeda, G; Costa, M; Pratas, J; Lanno, R P; Van Gestel, C A M; Sousa, J P

2012-08-01

Sewage sludge application to soils is regulated by its total metal content. However, the real risk of metals is determined by the fraction that is biologically available. The available fraction is highly related to the strength of metal binding by the matrix, which is a dynamic process. The evaluation of the fate of metals in time can contribute increased accuracy of ecological risk assessment. Aiming to evaluate short-term changes in metal availability when metals were applied to soil directly (metal-spiked) or by way of an organic matrix (sludge-amended), a laboratory experiment was performed using open microcosms filled with agricultural soil. A concentration gradient of industrial sludge (11, 15, 55, and 75 t/ha) that was contaminated predominantly with chromium, copper, nickel, and zinc, or soil freshly spiked with the same concentrations of these metals, were applied on top of the agricultural soil. After 0, 3, 6, and 12 weeks, total (HNO(3) 69 %) and 0.01 M CaCl(2)-extractable metal concentrations in soil and metal content in the percolates were measured. Results demonstrated that comparison between sludge-amended and metal-spiked soils may give important information about the role of sludge matrix on metal mobility and availability in soil. In sludge-amended soils, extractable-metal concentrations were independent of the sludge concentration and did not change over time. In metal-spiked soils, metal extractability decreased with time due to ageing and transport of metals to deeper layers. In general, the sludge matrix increased the adsorption of metals, thus decreasing their mobility in soils.

Microbial denitrification dominates nitrate losses from forest ecosystems

PubMed Central

Fang, Yunting; Koba, Keisuke; Makabe, Akiko; Takahashi, Chieko; Zhu, Weixing; Hayashi, Takahiro; Hokari, Azusa A.; Urakawa, Rieko; Bai, Edith; Houlton, Benjamin Z.; Xi, Dan; Zhang, Shasha; Matsushita, Kayo; Tu, Ying; Liu, Dongwei; Zhu, Feifei; Wang, Zhenyu; Zhou, Guoyi; Chen, Dexiang; Makita, Tomoko; Toda, Hiroto; Liu, Xueyan; Chen, Quansheng; Zhang, Deqiang; Li, Yide; Yoh, Muneoki

2015-01-01

Denitrification removes fixed nitrogen (N) from the biosphere, thereby restricting the availability of this key limiting nutrient for terrestrial plant productivity. This microbially driven process has been exceedingly difficult to measure, however, given the large background of nitrogen gas (N2) in the atmosphere and vexing scaling issues associated with heterogeneous soil systems. Here, we use natural abundance of N and oxygen isotopes in nitrate (NO3−) to examine dentrification rates across six forest sites in southern China and central Japan, which span temperate to tropical climates, as well as various stand ages and N deposition regimes. Our multiple stable isotope approach across soil to watershed scales shows that traditional techniques underestimate terrestrial denitrification fluxes by up to 98%, with annual losses of 5.6–30.1 kg of N per hectare via this gaseous pathway. These N export fluxes are up to sixfold higher than NO3− leaching, pointing to widespread dominance of denitrification in removing NO3− from forest ecosystems across a range of conditions. Further, we report that the loss of NO3− to denitrification decreased in comparison to leaching pathways in sites with the highest rates of anthropogenic N deposition. PMID:25605898

Coupled biotic-abiotic oxidation of organic matter by biogenic MnO_{2}

NASA Astrophysics Data System (ADS)

Gonzalez, Julia; Peña, Jasquelin

2016-04-01

Some reactive soil minerals are strongly implicated in stabilising organic matter. However, others can play an active role in the oxidation of organic molecules. In natural systems, layer-type manganese oxide minerals (MnO2) typically occur as biomineral assemblages consisting of mineral particles and microbial biomass. Both the mineral and biological fractions of the assemblage can be powerful oxidants of organic C. The biological compartment relies on a set of enzymes to drive oxidative transformations of reduced C-substrates, whereas MnO2 minerals are strong, less specific abiotic oxidants that are assumed to rely on interfacial interactions between C-substrates and the mineral surface. This project aims to understand the coupling between microbial C mineralization and abiotic C oxidation mediated by MnO2 in bacterial-MnO2 assemblages. Specifically, under conditions of high C turnover, microbial respiration can significantly alter local pH, dissolved oxygen and pool of available reductants, which may modify rates and mechanism of C oxidation by biotic and abiotic components. We first investigated changes in the solution chemistry of Pseudomonas putida suspensions exposed to varying concentrations of glucose, chosen to represent readily bioavailable substrates in soils. Glucose concentrations tested ranged between 0 and 5.5mM and changes in pH, dissolved oxygen and dissolved organic and inorganic carbon were tracked over 48h. We then combined literature review and wet-chemical experiments to compile the pH dependence of rates of organic substrate oxidation by MnO2, including glucose. Our results demonstrate a strong pH dependence for these abiotic reactions. In assemblages of P. putida - MnO2, kinetic limitations for abiotic C oxidation by MnO2 are overcome by changes in biogeochemical conditions that result from bacterial C metabolism. When extrapolated to a soil solution confronted to an input of fresh dissolved organic matter, bacterial C metabolism of the labile fraction may lower solution pH into a regime that favours abiotic oxidation of recalcitrant C by MnO2. This project demonstrates that the co-occurrence of mineral particles with metabolically active cells provides a direct link between the C and Mn cycles.

Where microorganisms meet rocks in the Earth's Critical Zone

NASA Astrophysics Data System (ADS)

Akob, D. M.; Küsel, K.

2011-03-01

The Earth's Critical Zone (CZ) is the critical, outer shell of the Earth that provides an arena for the interplay of diverse physical, chemical, and biological processes that are fundamental for sustaining life. As microbes are the principle drivers of biogeochemical cycles, it is necessary to understand the biodiversity of the CZ unseen majority and their impact on life-sustaining processes. This review aims to summarize the factors controlling where microbes (prokaryotes and micro-eukaryotes) live within the CZ and what is known to date about their diversity and function. Microbes live in all regions of the CZ down to 5 km depth, but due to changing habitat complexity, e.g., variability in pore spaces, water, oxygen, and nutrients, their functional role changes with depth. The abundance of prokaryotes and micro-eukaryotes decreases from a maximum of 1010 or 107 cells g soil-1 up to eight orders of magnitude with depth. Symbiotic mycorrhizal fungi and free-living decomposers are best understood in soil habitats, where they are up to 103 cells g soil-1. However, little is known about their identity and impact on weathering in the deep subsurface. The relatively low abundance of micro-eukaryotes in the deep subsurface suggests that these organisms are either limited in space or nutrients or unable to cope with oxygen limitations. Since deep regions of the CZ are limited in the recent input of photosynthesis-derived carbon, microbes are dependent on deposited organic material or on chemolithoautotrophic metabolism that allows for the establishment of a complete food chain independent from the surface. However, the energy flux available might only allow cell growth over tens to thousands of years. The recent development of "omics" technologies has provided microbial ecologists with methods to link the composition and function of in situ microbial communities. We should expect new metabolic discoveries as we have a closer look utilizing a polyphasic approach into the microbial communities of the CZ. Thus, future work is still needed to link microbial biodiversity to the exact role of microbes in weathering and geochemical cycling in the CZ, especially in subsurface habitats.

Selection of the Methods of Soil Analysis for Phyto-available Arsenic

NASA Astrophysics Data System (ADS)

Yoon, Junghwan; Lee, Dan-Bi; Kim, Kwon-Rae; Kim, Won-Il; Kim, Kye-Hoon

2016-04-01

Arsenic (As) is a trace element of major public health concern. Many of As contaminated agricultural lands in the Republic of Korea (ROK) are located at the areas nearby abandoned mines. Therefore, management of contaminated agricultural lands is important for safe crop cultivation. In ROK, soils contaminated with As have managed according to the As concentration determined after aqua regia digestion (total As). Many soil scientists reported that management of As in soils by phyto-available As is more effective than that by total As for safety of the crop cultivation point-of-view since As concentration in crops has a significant correlation with phyto-available As. Therefore, this study was carried out to select method of soil analysis for phyto-available As. For that purpose, five extracting solutions (0.1M Ca(NO?), 0.1M (NH?)?HPO?), 0.5M EDTA, Mehlich 3, 0.5M NaHCO?) were examined with 35 soil samples used for cultivation of three crops (bean, red pepper, rice). Correlation analysis was conducted between phyto-available As concentrations in soils and As concentration in edible part of the crops. Results of the correlation analysis showed that phyto-available As concentrations in soils using Mehlich 3 solution and As concentrations in edible part of red pepper and rice were significantly correlated. For soils used for bean cultivation, Mehlich 3 (R

Enhancing Potentially Plant-Available Lead Concentrations in Contaminated Residential Soils Using a Biodegradable Chelating Agent

NASA Astrophysics Data System (ADS)

Andra, S.; Datta, R.; Sarkar, D.; Saminathan, S.

2007-12-01

Chelation of heavy metals is an important factor in enhancing metal solubility and, hence, metal availability to plants to promote phytoremediation. In the present study, we compared the effects of application of a biodegradable chelating agent, namely, ethylenediaminedisuccinic acid (EDDS) on enhancing plant available form of lead (Pb) in Pb-based paint contaminated residential soils compared to that of a more commonly used, but non-biodegradable chelate, i.e., ethylenediaminetetraacetic acid (EDTA). Development of a successful phytoremediation model for metals such as Pb depends on a thorough understanding of the physical and chemical properties of the soil, along with the optimization of a chelate treatment to mobilize Pb from `unavailable' pools to potentially plant available fraction. In this context, we set out to perform batch incubation experiments to investigate the effectiveness of the two aforementioned chelates in enhancing plant available Pb at four different concentrations (0, 5, 10 and 15 mM/kg soil) and three treatment durations (0, 10 and 30 days). We selected 12 contaminated residential soils from two major metropolitan areas (San Antonio, TX and Baltimore, MD) with varying soil physico-chemical properties - the soils from San Antonio were primarily alkaline and those from Baltimore were typically acidic. Total soil Pb concentrations ranged between 256 mg/kg and 4,182 mg/kg. Our results show that both chelates increased the solubility of Pb, otherwise occluded in the complex soil matrix. For both EDTA and EDDS, the exchangeable concentrations of soil Pb also increased with increase in chelate concentration and incubation time. The most effective treatment was 15 mM chelate kg-1 soil incubated for 30 days, which caused many fold increase in potentially plant available Pb (a combination of the soluble and exchangeable fractions) relative to the unamended controls. Step wise multiple linear regression analysis using chelate-extractable Pb and soil properties showed that plant available Pb fraction could be assessed from the two inter-related soil parameters: soil organic matter and soil pH. Although EDTA was more effective in Pb solubilization than EDDS, the rapid kinetics of the Pb-EDTA complexation process and the prolonged persistence of EDTA in soils pose a potential groundwater contamination problem via metal leaching. In contrast to EDTA, EDDS addition caused relatively slow release of Pb from the soil matrix. The biodegradable nature (and short half life) of EDDS in soils makes it a promising chelating agent for use as soil amendment to enhance Pb solubilization and hence, potential plant uptake.

[Changes in bio-availability of immobilized Cu and Zn bound to phosphate in contaminated soils with different nutrient addition].

PubMed

Xu, Ming-Gang; Zhang, Qian; Sun, Nan; Shen, Hua-Ping; Zhang, Wen-Ju

2009-07-15

Bio-availability of Cu and Zn fixed by phosphate in contaminated soils with application of nutrients were measured by pot experiment. It was simulated for the third national standardization of copper and zinc polluted soils by adding copper and zinc nitrate into red and paddy soils, respectively and together. Phosphate amendment was added to the soils to fix Cu and Zn, then added KCl and NH4Cl or K2SO4 and (NH4)2SO4 fertilizers following to plant Ryegrass, which was harvested after 40 d. Available Cu/Zn content in soils and biomass, Cu/Zn content in the shoot of Ryegrass were determined. Results showed that, compared with no nutrient application, adding KCl and NH4 Cl/K2SO4 and (NH4)2SO4 to polluted red and paddy soils increased the available Cu and Zn content in red soil significantly. The increasing order was KCl and NH4 Cl > K2SO4 and (NH4)2SO4. Especially in single Zn polluted red soil, the available Zn content increased by 133.4% in maximum. Although adding K2SO4 and (NH4)2SO4 could promote the growth of Ryegrass on red soil, and the largest increasing was up to 22.2%, it increased Cu and Zn content in the shoot of Ryegrass for 21.5%-112.6% remarkably. These nutrient effects on available Cu and Zn were not significantly in paddy soil. It was suggested that application of nitrogen and potassium fertilizers to soils could change the bioavailability of Cu/Zn. So it is necessary to take full account of the nutrient influence to the heavy metal stability which fixed by phosphate in contaminated soils when consider contaminated soils remediation by fertilization.

Interaction Effect between Phosphorus and Zinc on their Availability in Soil in Relation to their Contents in Stevia (Stevia rebaudiana)

PubMed Central

Das, Kuntal; Dang, Raman; Shivananda, T. N.; Sur, Pintu

2005-01-01

A greenhouse experiment was conducted at the Indian Institute of Horticultural Research (IIHR), Bangalore to study the interaction effect between phosphorus and zinc on their availability in soil in relation to their contents in stevia (Stevia rebaudiana). The results show that the amount of available P and Zn content in soil has been found to increase initially and, thereafter, the amount of the same decreased with the progress of plant growth up to 60 days irrespective of treatments. The amount of P and Zn in soils showed an increase with their separate applications either as soil or foliar spray while that of the same value significantly decreased both in soils and plants due to their combined applications, suggesting a mutual antagonistic effect between Zn and P affecting each other's availability in soil and content in the stevia plant. PMID:15980919

Changes in soil physicochemical properties and soil bacterial community in mulberry (Morus alba L.)/alfalfa (Medicago sativa L.) intercropping system.

PubMed

Zhang, Meng-Meng; Wang, Ning; Hu, Yan-Bo; Sun, Guang-Yu

2018-04-01

A better understanding of tree-based intercropping effects on soil physicochemical properties and bacterial community has a potential contribution to improvement of agroforestry productivity and sustainability. In this study, we investigated the effects of mulberry/alfalfa intercropping on soil physicochemical properties and soil bacterial community by MiSeq sequencing of bacterial 16S rRNA gene. The results showed a significant increase in the contents of available nitrogen, available phosphate, available potassium, and total carbon in the rhizosphere soil of the intercropped alfalfa. Sequencing results showed that intercropping improved bacterial richness and diversity of mulberry and alfalfa based on richness estimates and diversity indices. The relative abundances of Proteobacteria, Actinobacteria, and Firmicutes were significantly higher in intercropping mulberry than in monoculture mulberry; and the abundances of Proteobacteria, Bacteroidetes, and Gemmatimonadetes in the intercropping alfalfa were markedly higher than that in monoculture alfalfa. Bacterial taxa with soil nutrients cycling were enriched in the intercropping system. There were higher relative abundances of Bacillus (0.32%), Pseudomonas (0.14%), and Microbacterium (0.07%) in intercropping mulberry soil, and Bradyrhizobium (1.0%), Sphingomonas (0.56%), Pseudomonas (0.18%), Microbacterium (0.15%), Rhizobium (0.09%), Neorhizobium (0.08%), Rhodococcus (0.06%), and Burkholderia (0.04%) in intercropping alfalfa soil. Variance partition analysis showed that planting pattern contributed 26.7% of the total variation of bacterial community, and soil environmental factors explained approximately 56.5% of the total variation. This result indicated that the soil environmental factors were more important than the planting pattern in shaping the bacterial community in the field soil. Overall, mulberry/alfalfa intercropping changed soil bacterial community, which was related to changes in soil total carbon, available phosphate, and available potassium. © 2018 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd.

Benthic perspective on Earth's oldest evidence for oxygenic photosynthesis.

PubMed

Lalonde, Stefan V; Konhauser, Kurt O

2015-01-27

The Great Oxidation Event (GOE) is currently viewed as a protracted process during which atmospheric oxygen increased above ∼10(-5) times the present atmospheric level (PAL). This threshold represents an estimated upper limit for sulfur isotope mass-independent fractionation (S-MIF), an Archean signature of atmospheric anoxia that begins to disappear from the rock record at 2.45 Ga. However, an increasing number of papers have suggested that the timing for oxidative continental weathering, and by conventional thinking the onset of atmospheric oxygenation, was hundreds of million years earlier than previously thought despite the presence of S-MIF. We suggest that this apparent discrepancy can be resolved by the earliest oxidative-weathering reactions occurring in benthic and soil environments at profound redox disequilibrium with the atmosphere, such as biological soil crusts and freshwater microbial mats covering riverbed, lacustrine, and estuarine sediments. We calculate that oxygenic photosynthesis in these millimeter-thick ecosystems provides sufficient oxidizing equivalents to mobilize sulfate and redox-sensitive trace metals from land to the oceans while the atmosphere itself remained anoxic with its attendant S-MIF signature. As continental freeboard increased significantly between 3.0 and 2.5 Ga, the chemical and isotopic signatures of benthic oxidative weathering would have become more globally significant from a mass-balance perspective. These observations help reconcile evidence for pre-GOE oxidative weathering with the history of atmospheric chemistry, and support the plausible antiquity of a terrestrial biosphere populated by cyanobacteria well before the GOE.

Benthic perspective on Earth’s oldest evidence for oxygenic photosynthesis

PubMed Central

Konhauser, Kurt O.

2015-01-01

The Great Oxidation Event (GOE) is currently viewed as a protracted process during which atmospheric oxygen increased above ∼10−5 times the present atmospheric level (PAL). This threshold represents an estimated upper limit for sulfur isotope mass-independent fractionation (S-MIF), an Archean signature of atmospheric anoxia that begins to disappear from the rock record at 2.45 Ga. However, an increasing number of papers have suggested that the timing for oxidative continental weathering, and by conventional thinking the onset of atmospheric oxygenation, was hundreds of million years earlier than previously thought despite the presence of S-MIF. We suggest that this apparent discrepancy can be resolved by the earliest oxidative-weathering reactions occurring in benthic and soil environments at profound redox disequilibrium with the atmosphere, such as biological soil crusts and freshwater microbial mats covering riverbed, lacustrine, and estuarine sediments. We calculate that oxygenic photosynthesis in these millimeter-thick ecosystems provides sufficient oxidizing equivalents to mobilize sulfate and redox-sensitive trace metals from land to the oceans while the atmosphere itself remained anoxic with its attendant S-MIF signature. As continental freeboard increased significantly between 3.0 and 2.5 Ga, the chemical and isotopic signatures of benthic oxidative weathering would have become more globally significant from a mass-balance perspective. These observations help reconcile evidence for pre-GOE oxidative weathering with the history of atmospheric chemistry, and support the plausible antiquity of a terrestrial biosphere populated by cyanobacteria well before the GOE. PMID:25583484

Maintenance and design of steel abutment piles in Iowa bridges.

DOT National Transportation Integrated Search

2014-09-01

Soil consolidation and erosion caused by roadway runoff have exposed the upper portions of steel piles at the abutments of : numerous bridges, leaving them susceptible to accelerated corrosion rates due to the abundance of moisture, oxygen, and : chl...

Microhabitat Effects on N2O Emissions from Floodplain Soils under Controlled Conditions

NASA Astrophysics Data System (ADS)

Ley, Martin; Lehmann, Moritz F.; Niklaus, Pascal A.; Kuhn, Thomas; Luster, Jörg

2016-04-01

Semi-terrestrial soils such as floodplain soils are considered to be potential hotspots of nitrous oxide (N2O) emissions. The quantitative assessment of N2O release from these hotspots under field conditions, and of the microbial pathways that underlie net N2O production (ammonium oxidation, nitrifier-denitrification, and denitrification) is challenging because of their high spatial and temporal variability. The production and consumption of N2O appears to be linked to the presence or absence of micro-niches, providing specific conditions that may be favorable to either of the relevant microbial pathways. Flood events have been shown to trigger moments of enhanced N2O emission through a close coupling of niches with high and low oxygen availabilities. This coupling might be modulated by microhabitat effects related to soil aggregate formation, root soil interactions and the degradation of organic matter accumulations. In order to assess how these factors can modulate N2O production and consumption under simulated flooding/drying conditions, we have set up a mesocosm experiment with N-rich floodplain soils comprising different combinations of soil aggregate size classes and inert matrix material. These model soils were either planted with basket willow (Salix viminalis L.), mixed with leaf litter, or left untreated. Throughout a simulated flood event, we repeatedly measured the net N2O production rate. In addition, soil water content, redox potential, as well as C and N substrate availability were monitored. In order to gain insight into the sources of, and biogeochemical controls on N2O production, we also measured the bulk δ15N signature of the produced N2O, as well as its intramolecular 15N site preference (SP). In this presentation we focus on a period of enhanced N2O emission during the drying phase after 48 hrs of flooding. We will discuss the observed emission patterns in the context of possible treatment effects. Soils with large aggregates showed a tendency to emit more N2O than small-aggregate soils. Salix viminalis strongly suppressed the N2O emissions, fully compensating for any aggregate effects. Litter accumulation on the other hand enhanced N2O emission from well-aggregated soils, but showed only a small effect in combination with small aggregates. In moments of highest emission rates, the measured δ15Nbulk of headspace N2O was considerably lower relative to atmospheric N2O (δ15N between -20 ‰ and -25 ‰) in the amended treatments, suggesting N2O production by denitrification or by nitrifier-denitrification. Untreated mesocosms produced an even lower δ15Nbulk (-40‰). Similarly, aggregate formation/size seemed to affect the N2O δ15Nbulk values, suggesting different net N2O production dynamics under different microhabitat conditions, which will be elucidated further, using 15N site preference SP data. Combining stable isotope techniques with quantitative flux data from a mesoscale laboratory experiment, our data highlight the importance of microhabitat effects in modulating N2O emission from floodplain soils. It also underscores their influence on the N2O production pathways involved in the occurrence of N2O emission hot spots and moments.

A new grading system for plant-available potassium using exhaustive cropping techniques combined with chemical analyses of soils

PubMed Central

Li, Ting; Wang, Huoyan; Zhou, Zijun; Chen, Xiaoqin; Zhou, Jianmin

2016-01-01

A new grading system for plant-available potassium (K) in soils based on K release rate from soils and plant growth indices was established. In the study, fourteen different agricultural soils from the southern subtropical to the northern temperate zones in China were analyzed by both chemical extraction methods and exhaustive cropping techniques. Based on the change trends in plant growth indices, relative biomass yields of 70% and 50%, K-deficient coefficients of 35 and 22 under conventional exhaustive experiments, and tissue K concentrations of 40 g kg−1 and 15 g kg−1 under intensive exhaustive experiments were obtained as critical values that represent different change trends. In addition, the extraction method using 0.2 mol L−1 sodium tetraphenylboron (NaTPB) suggested soil K release rates of 12 mg kg−1 min−1 and 0.4 mg kg−1 min−1 as turning points that illustrated three different release trends. Thus, plant-available K in soils was classified into three categories: high available K, medium available K and low available K, and grading criteria and measurement methods were also proposed. This work has increased our understanding of soil K bioavailability and has direct application in terms of routine assessment of agriculture soils. PMID:27876838

Electrokinetic remediation of fluorine-contaminated soil and its impact on soil fertility.

PubMed

Zhou, Ming; Wang, Hui; Zhu, Shufa; Liu, Yana; Xu, Jingming

2015-11-01

Compared to soil pollution by heavy metals and organic pollutants, soil pollution by fluorides is usually ignored in China. Actually, fluorine-contaminated soil has an unfavorable influence on human, animals, plants, and surrounding environment. This study reports on electrokinetic remediation of fluorine-contaminated soil and the effects of this remediation technology on soil fertility. Experimental results showed that electrokinetic remediation using NaOH as the anolyte was a considerable choice to eliminate fluorine in contaminated soils. Under the experimental conditions, the removal efficiency of fluorine by the electrokinetic remediation method was 70.35%. However, the electrokinetic remediation had a significant impact on the distribution and concentrations of soil native compounds. After the electrokinetic experiment, in the treated soil, the average value of available nitrogen was raised from 69.53 to 74.23 mg/kg, the average value of available phosphorus and potassium were reduced from 20.05 to 10.39 mg/kg and from 61.31 to 51.58 mg/kg, respectively. Meanwhile, the contents of soil available nitrogen and phosphorus in the anode regions were higher than those in the cathode regions, but the distribution of soil available potassium was just the opposite. In soil organic matter, there was no significant change. These experiment results suggested that some steps should be taken to offset the impacts, after electrokinetic treatment.

Heat Pipe Solar Receiver for Oxygen Production of Lunar Regolith

NASA Astrophysics Data System (ADS)

Hartenstine, John R.; Anderson, William G.; Walker, Kara L.; Ellis, Michael C.

2009-03-01

A heat pipe solar receiver operating in the 1050° C range is proposed for use in the hydrogen reduction process for the extraction of oxygen from the lunar soil. The heat pipe solar receiver is designed to accept, isothermalize and transfer solar thermal energy to reactors for oxygen production. This increases the available area for heat transfer, and increases throughput and efficiency. The heat pipe uses sodium as the working fluid, and Haynes 230 as the heat pipe envelope material. Initial design requirements have been established for the heat pipe solar receiver design based on information from the NASA In-Situ Resource Utilization (ISRU) program. Multiple heat pipe solar receiver designs were evaluated based on thermal performance, temperature uniformity, and integration with the solar concentrator and the regolith reactor(s). Two designs were selected based on these criteria: an annular heat pipe contained within the regolith reactor and an annular heat pipe with a remote location for the reactor. Additional design concepts have been developed that would use a single concentrator with a single solar receiver to supply and regulate power to multiple reactors. These designs use variable conductance or pressure controlled heat pipes for passive power distribution management between reactors. Following the design study, a demonstration heat pipe solar receiver was fabricated and tested. Test results demonstrated near uniform temperature on the outer surface of the pipe, which will ultimately be in contact with the regolith reactor.

EVALUATION OF LEAD AVAILABILITY IN AMENDED SOILS MONITORED OVER A LONG-TERM TIME PERIOD

EPA Science Inventory

Two different soil amendment processes were evaluated for reducing lead availability from a contaminated soil at a demonstration study site, to reduce potential public health and environmental concerns. A limited variety of in vitro laboratory availability tests (relativ...

An Evaluation of the Environmental Fate and behavior of Munitions Materiel (TNT, RDX) in Soil and Plant Systems. Environmental Fate and behavior of TNT

DTIC Science & Technology

1989-08-01

to which roots are exposed. Thus, soil sorption will control the concentration of soil - solution TNT and/or TNT-derived residues available for root... soil - solution TNT and/or TNT-derived residues available for root uptake. Hydroponic systems were used to calibrate subsequent soil studies and to

Metolachlor sorption and degradation in soil amended with fresh and aged biochar

USDA-ARS?s Scientific Manuscript database

Addition of organic amendments such as biochar to soils can influence pesticide sorption-desorption processes, and in turn, pesticide availability and biodegradation. Availability is affected by both the physical and chemical properties of soils and pesticides, as well as soil-pesticide contact time...

Soil ionomic and enzymatic responses and correlations to fertilizations amended with and without organic fertilizer in long-term experiments.

PubMed

Feng, Xumeng; Ling, Ning; Chen, Huan; Zhu, Chen; Duan, Yinghua; Peng, Chang; Yu, Guanghui; Ran, Wei; Shen, Qirong; Guo, Shiwei

2016-04-15

To investigate potential interactions between the soil ionome and enzyme activities affected by fertilization with or without organic fertilizer, soil samples were collected from four long-term experiments over China. Irrespective of variable interactions, fertilization type was the major factor impacting soil ionomic behavior and accounted for 15.14% of the overall impact. Sampling site was the major factor affecting soil enzymatic profile and accounted for 34.25% of the overall impact. The availabilities of Pb, La, Ni, Co, Fe and Al were significantly higher in soil with only chemical fertilizer than the soil with organic amendment. Most of the soil enzyme activities, including α-glucosidase activity, were significantly activated by organic amendment. Network analysis between the soil ionome and the soil enzyme activities was more complex in the organic-amended soils than in the chemical fertilized soils, whereas the network analysis among the soil ions was less complex with organic amendment. Moreover, α-glucosidase was revealed to generally harbor more corrections with the soil ionic availabilities in network. We concluded that some of the soil enzymes activated by organic input can make the soil more vigorous and stable and that the α-glucosidase revealed by this analysis might help stabilize the soil ion availability.

Soil ionomic and enzymatic responses and correlations to fertilizations amended with and without organic fertilizer in long-term experiments

PubMed Central

Feng, Xumeng; Ling, Ning; Chen, Huan; Zhu, Chen; Duan, Yinghua; Peng, Chang; Yu, Guanghui; Ran, Wei; Shen, Qirong; Guo, Shiwei

2016-01-01

To investigate potential interactions between the soil ionome and enzyme activities affected by fertilization with or without organic fertilizer, soil samples were collected from four long-term experiments over China. Irrespective of variable interactions, fertilization type was the major factor impacting soil ionomic behavior and accounted for 15.14% of the overall impact. Sampling site was the major factor affecting soil enzymatic profile and accounted for 34.25% of the overall impact. The availabilities of Pb, La, Ni, Co, Fe and Al were significantly higher in soil with only chemical fertilizer than the soil with organic amendment. Most of the soil enzyme activities, including α-glucosidase activity, were significantly activated by organic amendment. Network analysis between the soil ionome and the soil enzyme activities was more complex in the organic-amended soils than in the chemical fertilized soils, whereas the network analysis among the soil ions was less complex with organic amendment. Moreover, α-glucosidase was revealed to generally harbor more corrections with the soil ionic availabilities in network. We concluded that some of the soil enzymes activated by organic input can make the soil more vigorous and stable and that the α-glucosidase revealed by this analysis might help stabilize the soil ion availability. PMID:27079657

Wastewater renovation using constructed soil filter (CSF): a novel approach.

PubMed

Nemade, P D; Kadam, A M; Shankar, H S

2009-10-30

Constructed soil filter (CSF) also known as Soil Biotechnology (SBT) is a process for water renovation which makes use of formulated media with culture of soil macro- and microorganisms. CSF combines sedimentation, infiltration and biodegradation processes to remove oxidizable organics and inorganics of wastewater in a single facility. Operating experience shows hydraulic loading in the range of 0.05-0.25 m(3)/m(2) h and organic loading up to 200-680 g/m(2) d. The results show increase in dissolved oxygen levels, COD removal (from 352 mg/l to 20 mg/l); BOD removal (from 211 mg/l to 7.0 mg/l); suspended solids removal (from 293 mg/l to 16 mg/l); turbidity reduction (from 145 NTU to 5.3 NTU); iron (from 5 mg/l to 0.3 mg/l); arsenic (from 500 microg/l to 10 microg/l); total coliform and fecal coliform removal (from 145 x 10(5) to 55 CFU/100 mL and 150 x 10(8) to 110 CFU/100 mL respectively), with desired pathogen levels as per WHO standards, i.e. < or =10(3) CFU/100 mL. CSF reveals advantages such as low HRT (0.5-2.0 h), low energy requirement (0.04 kWh/m(3)), no pre-treatment, high dissolved oxygen levels in the effluent, no biosludge production, no mechanical aeration and no odor, fish compatible water quality and evergreen ambience.

Oxygation enhances growth, gas exchange and salt tolerance of vegetable soybean and cotton in a saline vertisol.

PubMed

Bhattarai, Surya P; Midmore, David J

2009-07-01

Impacts of salinity become severe when the soil is deficient in oxygen. Oxygation (using aerated water for subsurface drip irrigation of crop) could minimize the impact of salinity on plants under oxygen-limiting soil environments. Pot experiments were conducted to evaluate the effects of oxygation (12% air volume/volume of water) on vegetable soybean (moderately salt tolerant) and cotton (salt tolerant) in a salinized vertisol at 2, 8, 14, 20 dS/m EC(e). In vegetable soybean, oxygation increased above ground biomass yield and water use efficiency (WUE) by 13% and 22%, respectively, compared with the control. Higher yield with oxygation was accompanied by greater plant height and stem diameter and reduced specific leaf area and leaf Na+ and Cl- concentrations. In cotton, oxygation increased lint yield and WUE by 18% and 16%, respectively, compared with the control, and was accompanied by greater canopy light interception, plant height and stem diameter. Oxygation also led to a greater rate of photosynthesis, higher relative water content in the leaf, reduced crop water stress index and lower leaf water potential. It did not, however, affect leaf Na+ or Cl- concentration. Oxygation invariably increased, whereas salinity reduced the K+ : Na+ ratio in the leaves of both species. Oxygation improved yield and WUE performance of salt tolerant and moderately tolerant crops under saline soil environments, and this may have a significant impact for irrigated agriculture where saline soils pose constraints to crop production.

Size-fractionation and characterization of landfill leachate and the improvement of Cu{sup 2+} adsorption capacity in soil and aged refuse

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lou Ziyang; State Key Laboratory of Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Tongji University, Shanghai 200092; Chai Xiaoli

2009-01-15

Leachate was collected from an anaerobic lagoon at Shanghai Laogang refuse landfill, the largest landfill in China, and the sample was separated into six fractions using micro-filtration membranes, followed by ultra-filtration membranes. Several parameters of the samples were measured, including chemical oxygen demand (COD), total organic carbon (TOC), total solids (TS), pH, total phosphate (TP), total nitrogen (TN), fixed solids (FS), NH{sub 4}{sup +}, orthophosphate, color, turbidity, and conductivity. These parameters were then quantitatively correlated with the molecular weight cutoff of the membrane used. Organic matter in the dissolved fraction (MW < 1 kDa) predominated in the leachate, accounting formore » 65% of TOC. Thermal infrared spectroscopy was used to characterize the filter residues. Asymmetric and symmetric stretching of methyl and methylene groups, and of functional groups containing nitrogen and oxygen atoms, were observed. In addition, the ability of two different samples to adsorb heavy metals was tested. Cu{sup 2+} was chosen as the representative heavy metal in this study, and the samples were soil; aged refuse, which had spent 8 years in a conventional sanitary landfill; and samples of soil and aged refuse treated for 48 h with leachate in the ratio of 5 g of sample per 50 ml of leachate. Cu{sup 2+} uptake by the raw soil was {approx}4.60 {mu}g/g, while uptake by the leachate-contacted soil and leachate-contacted aged refuse were 5.66 and 5.11 {mu}g/g, respectively. These results show that the organic matter in the leachate enhanced the capacity of aqueous solutions to adsorb Cu{sup 2+}.« less

Tree-mediated methane emissions from tropical and temperate peatlands.

NASA Astrophysics Data System (ADS)

Pangala, S. R.; Gauci, V.; Hornibrook, E. R. C.; Gowing, D. J.

2012-04-01

Methane production and transport processes in peatlands are fairly well understood, but growing evidence for emission of methane through trees has highlighted the need to revisit methane transport processes. In wetland trees, morphological adaptations such as development of hypertrophied lenticels, aerenchyma and adventitious roots in response to soil anoxia mediates gas transport, transporting both oxygen from the atmosphere to oxygen-deprived roots and soil-produced methane from the root-zone to the atmosphere. Although, tree-mediated methane emissions from temperate tree species have been confirmed, methane emissions from tropical tree species and processes that control tree-mediated methane emissions remain unclear. This study explains the role of trees in transporting soil-produced methane to the atmosphere and uncovers the principal mechanisms of tree-mediated methane emissions. Methane emissions from eight tropical tree species and two temperate tree species were studied in situ. The mechanisms and controls on tree-mediated methane emissions were investigated using three year old common alder (Alnus glutinosa; 50 trees) grown under two artificially controlled water-table positions. Methane fluxes from whole mesocosms, the soil surface and tree stems were measured using static closed chambers. Both temperate and tropical tree species released significant quantities of methane, with tropical trees dominating ecosystem level methane fluxes. In temperate peatlands, both the methane gas transport mechanism and quantity of methane emitted from stems is tree-species dependent. In Alnus glutinosa, no correlations were observed between stomatal behaviour and tree-mediated methane emissions, however, stem methane emissions were positively correlated with both stem lenticel density and dissolved soil methane concentration. In Alnus glutinosa, no emissions were observed from leaf surfaces. The results demonstrate that exclusion of tree-mediated methane emissions from flux measurement campaigns in forested peatlands will lead to an underestimation of ecosystem-wide methane emissions.

A multi-imaging approach to study the root–soil interface

PubMed Central

Rudolph-Mohr, Nicole; Vontobel, Peter; Oswald, Sascha E.

2014-01-01

Background and Aims Dynamic processes occurring at the soil–root interface crucially influence soil physical, chemical and biological properties at a local scale around the roots, and are technically challenging to capture in situ. This study presents a novel multi-imaging approach combining fluorescence and neutron radiography that is able to simultaneously monitor root growth, water content distribution, root respiration and root exudation. Methods Germinated seeds of white lupins (Lupinus albus) were planted in boron-free glass rhizotrons. After 11 d, the rhizotrons were wetted from the bottom and time series of fluorescence and neutron images were taken during the subsequent day and night cycles for 13 d. The following day (i.e. 25 d after planting) the rhizotrons were again wetted from the bottom and the measurements were repeated. Fluorescence sensor foils were attached to the inner sides of the glass and measurements of oxygen and pH were made on the basis of fluorescence intensity. The experimental set-up allowed for simultaneous fluorescence imaging and neutron radiography. Key Results The interrelated patterns of root growth and distribution in the soil, root respiration, exudation and water uptake could all be studied non-destructively and at high temporal and spatial resolution. The older parts of the root system with greater root-length density were associated with fast decreases of water content and rapid changes in oxygen concentration. pH values around the roots located in areas with low soil water content were significantly lower than the rest of the root system. Conclusions The results suggest that the combined imaging set-up developed here, incorporating fluorescence intensity measurements, is able to map important biogeochemical parameters in the soil around living plants with a spatial resolution that is sufficiently high enough to relate the patterns observed to the root system. PMID:25344936

Sintering of Lunar and Simulant Glass

NASA Technical Reports Server (NTRS)

Cooper, Bonnie L.

2007-01-01

Most oxygen-extraction techniques are temperature-dependent, with higher temperatures resulting in higher oxygen yield. An example is hydrogen reduction, in which the optimum process temperature is 1050 C. However, glass-rich lunar soil begins to show the effects of sintering at temperatures of 900 C or lower. Sintering welds particles together due to viscous relaxation of the glass in the sample. One approach to avoid problems related to sintering, such as difficulty in removing waste material from the reactor, is to keep the soil in motion. One of several methods being studied to accomplish this is fluidized-bed processing techniques, in which the grains are kept in motion by the action of flowing reductant gas. The spent material can be removed from the chamber while still fluidized, or the fluidizing motion can continue until the material has cooled below approx. 500 C. Until end-to-end prototypes are built that can remove the heated soil, the most practical option is to keep the bed fluidized while cooling the waste material. As ISRU technology advances, another option will become valuable, which is to intentionally sinter the material to a great enough extent that it becomes a brick. The free iron in lunar soil is magnetic, and ferromagnetic bricks can be manipulated by robotic systems using electromagnetic end effectors. Finally, if an electromagnetic field is applied to the soil while the brick is being formed, the brick itself will become a magnet. This property can be used to create self-aligning bricks or other building materials that do not require fasteners. Although sintering creates a challenge for early lunar surface systems, knowledge gained during prototype development will be valuable for the advanced lunar outpost.

Plant adaptations to severely phosphorus-impoverished soils.

PubMed

Lambers, Hans; Martinoia, Enrico; Renton, Michael

2015-06-01

Mycorrhizas play a pivotal role in phosphorus (P) acquisition of plant roots, by enhancing the soil volume that can be explored. Non-mycorrhizal plant species typically occur either in relatively fertile soil or on soil with a very low P availability, where there is insufficient P in the soil solution for mycorrhizal hyphae to be effective. Soils with a very low P availability are either old and severely weathered or relatively young with high concentrations of oxides and hydroxides of aluminium and iron that sorb P. In such soils, cluster roots and other specialised roots that release P-mobilising carboxylates are more effective than mycorrhizas. Cluster roots are ephemeral structures that release carboxylates in an exudative burst. The carboxylates mobilise sparingly-available sources of soil P. The relative investment of biomass in cluster roots and the amount of carboxylates that are released during the exudative burst differ between species on severely weathered soils with a low total P concentration and species on young soils with high total P concentrations but low P availability. Taking a modelling approach, we explore how the optimal cluster-root strategy depends on soil characteristics, thus offering insights for plant breeders interested in developing crop plants with optimal cluster-root strategies. Copyright © 2015 Elsevier Ltd. All rights reserved.

A review of factors influencing the availability of dissolved oxygen to incubating salmonid embryos

NASA Astrophysics Data System (ADS)

Greig, S. M.; Sear, D. A.; Carling, P. A.

2007-01-01

Previous investigations into factors influencing incubation success of salmonid progeny have largely been limited to the development of empirical relationships between characteristics of the incubation environment and survival to emergence. It is suggested that adopting a process-based approach to assessing incubation success aids identification of the precise causes of embryonic mortalities, and provides a robust framework for developing and implementing managerial responses.Identifying oxygen availability within the incubation environment as a limiting factor, a comprehensive review of trends in embryonic respiration, and processes influencing the flux of oxygenated water through gravel riverbeds is provided. The availability of oxygen to incubating salmonid embryos is dependent on the exchange of oxygenated water with the riverbed, and the ability of the riverbed gravel medium to transport this water at a rate and concentration appropriate to support embryonic respiratory requirements. Embryonic respiratory trends indicate that oxygen consumption varies with stage of development, ambient water temperature and oxygen availability. The flux of oxygenated water through the incubation environment is controlled by a complex interaction of intragravel and extragravel processes and factors. The processes driving the exchange of channel water with gravel riverbeds include bed topography, bed permeability, and surface roughness effects. The flux of oxygenated water through riverbed gravels is controlled by gravel permeability, coupling of surface-subsurface flow and oxygen demands imposed by materials infiltrating riverbed gravels. Temporally and spatially variable inputs of groundwater can also influence the oxygen concentration of interstitial water. Copyright