Genotype and plant trait effects on soil CO2 efflux responses to altered precipitation in switchgrass

USDA-ARS?s Scientific Manuscript database

Background/Question/Methods Global climate change models predict increasing drought during the growing season, which will alter many ecosystem processes including soil CO2 efflux (JCO2), with potential consequences for carbon retention in soils. Soil moisture, soil temperature and plant traits such...

Soil food web properties explain ecosystem services across European land use systems.

PubMed

de Vries, Franciska T; Thébault, Elisa; Liiri, Mira; Birkhofer, Klaus; Tsiafouli, Maria A; Bjørnlund, Lisa; Bracht Jørgensen, Helene; Brady, Mark Vincent; Christensen, Søren; de Ruiter, Peter C; d'Hertefeldt, Tina; Frouz, Jan; Hedlund, Katarina; Hemerik, Lia; Hol, W H Gera; Hotes, Stefan; Mortimer, Simon R; Setälä, Heikki; Sgardelis, Stefanos P; Uteseny, Karoline; van der Putten, Wim H; Wolters, Volkmar; Bardgett, Richard D

2013-08-27

Intensive land use reduces the diversity and abundance of many soil biota, with consequences for the processes that they govern and the ecosystem services that these processes underpin. Relationships between soil biota and ecosystem processes have mostly been found in laboratory experiments and rarely are found in the field. Here, we quantified, across four countries of contrasting climatic and soil conditions in Europe, how differences in soil food web composition resulting from land use systems (intensive wheat rotation, extensive rotation, and permanent grassland) influence the functioning of soils and the ecosystem services that they deliver. Intensive wheat rotation consistently reduced the biomass of all components of the soil food web across all countries. Soil food web properties strongly and consistently predicted processes of C and N cycling across land use systems and geographic locations, and they were a better predictor of these processes than land use. Processes of carbon loss increased with soil food web properties that correlated with soil C content, such as earthworm biomass and fungal/bacterial energy channel ratio, and were greatest in permanent grassland. In contrast, processes of N cycling were explained by soil food web properties independent of land use, such as arbuscular mycorrhizal fungi and bacterial channel biomass. Our quantification of the contribution of soil organisms to processes of C and N cycling across land use systems and geographic locations shows that soil biota need to be included in C and N cycling models and highlights the need to map and conserve soil biodiversity across the world.

Soil food web properties explain ecosystem services across European land use systems

PubMed Central

de Vries, Franciska T.; Thébault, Elisa; Liiri, Mira; Birkhofer, Klaus; Tsiafouli, Maria A.; Bjørnlund, Lisa; Bracht Jørgensen, Helene; Brady, Mark Vincent; Christensen, Søren; de Ruiter, Peter C.; d’Hertefeldt, Tina; Frouz, Jan; Hedlund, Katarina; Hemerik, Lia; Hol, W. H. Gera; Hotes, Stefan; Mortimer, Simon R.; Setälä, Heikki; Sgardelis, Stefanos P.; Uteseny, Karoline; van der Putten, Wim H.; Wolters, Volkmar; Bardgett, Richard D.

2013-01-01

Intensive land use reduces the diversity and abundance of many soil biota, with consequences for the processes that they govern and the ecosystem services that these processes underpin. Relationships between soil biota and ecosystem processes have mostly been found in laboratory experiments and rarely are found in the field. Here, we quantified, across four countries of contrasting climatic and soil conditions in Europe, how differences in soil food web composition resulting from land use systems (intensive wheat rotation, extensive rotation, and permanent grassland) influence the functioning of soils and the ecosystem services that they deliver. Intensive wheat rotation consistently reduced the biomass of all components of the soil food web across all countries. Soil food web properties strongly and consistently predicted processes of C and N cycling across land use systems and geographic locations, and they were a better predictor of these processes than land use. Processes of carbon loss increased with soil food web properties that correlated with soil C content, such as earthworm biomass and fungal/bacterial energy channel ratio, and were greatest in permanent grassland. In contrast, processes of N cycling were explained by soil food web properties independent of land use, such as arbuscular mycorrhizal fungi and bacterial channel biomass. Our quantification of the contribution of soil organisms to processes of C and N cycling across land use systems and geographic locations shows that soil biota need to be included in C and N cycling models and highlights the need to map and conserve soil biodiversity across the world. PMID:23940339

Soil Genesis and Development, Lesson 2 - Processes of Weathering

USDA-ARS?s Scientific Manuscript database

Weathering processes — which include physical, chemical, and biological — contribute to the development of soil. The learning objectives of the lesson are: 1) Define and distinguish physical, chemical, and biological weathering processes; and 2) Describe how rock and mineral properties and environm...

SITE EVALUATION OF SOIL AMENDMENT TECHNOLOGIES AT THE CROOKSVILLE/ROSEVILLE POTTERY AREA OF CONCERN - STAR ORGANICS SOIL RESCUE CAPSULE

EPA Science Inventory

This report briefly summarizes Star Organics treatment technology demonstration of a soil amendment process for lead contaminated soil at Roseville, OH. The evaluation included leaching, bioavailability, geotechnical, and geochemical testing methods.

Modeling the Dynamics of Soil Structure and Water in Agricultural Soil

NASA Astrophysics Data System (ADS)

Weller, U.; Lang, B.; Rabot, E.; Stössel, B.; Urbanski, L.; Vogel, H. J.; Wiesmeier, M.; Wollschlaeger, U.

2017-12-01

The impact of agricultural management on soil functions is manifold and severe. It has both positive and adverse influence. Our goal is to develop model tools quantifying the agricultural impact on soil functions based on a mechanistic understanding of soil processes to support farmers and decision makers. The modeling approach is based on defining relevant soil components, i.e. soil matrix, macropores, organisms, roots and organic matter. They interact and form the soil's macroscopic properties and functions including water and gas dynamics, and biochemical cycles. Based on existing literature information we derive functional interaction processes and combine them in a network of dynamic soil components. In agricultural soils, a major issue is linked to changes in soil structure and their influence on water dynamics. Compaction processes are well studied in literature, but for the resilience due to root growth and activity of soil organisms the information is scarcer. We implement structural dynamics into soil water and gas simulations using a lumped model that is both coarse enough to allow extensive model runs while still preserving some important, yet rarely modeled phenomenons like preferential flow, hysteretic and dynamic behavior. For simulating water dynamics, at each depth, the model assumes water at different binding energies depending on soil structure, i.e. the pore size distribution. Non-equilibrium is postulated, meaning that free water may occur even if the soil is not fully saturated. All energy levels are interconnected allowing water to move, both within a spatial node, and between neighboring nodes (adding gravity). Structure dynamics alters the capacity of this water compartments, and the conductance of its connections. Connections are switched on and off depending on whether their sources contain water or their targets have free capacity. This leads to piecewise linear system behavior that allows fast calculation for extended time steps. Based on this concept, the dynamics of soil structure can be directly linked to soil water dynamics as a main driver for other soil processes. Further steps will include integration of temperature and solute leaching as well as defining the feedback of the water regime on the structure forming processes.

Invasive soil organisms and their effects on belowground processes

Treesearch

Erik Lilleskov; Jr. Mac A. Callaham; Richard Pouyat; Jane E. Smith; Michael Castellano; Grizelle Gonzalez; D. Jean Lodge; Rachel Arango; Frederick Green

2010-01-01

Invasive species have a wide range of effects on soils and their inhabitants. By altering soils, through their direct effects on native soil organisms (including plants), and by their interaction with the aboveground environment, invasive soil organisms can have dramatic effects on the environment, the economy and human health. The most widely recognized effects...

Coupled Modeling of Rhizosphere and Reactive Transport Processes

NASA Astrophysics Data System (ADS)

Roque-Malo, S.; Kumar, P.

2017-12-01

The rhizosphere, as a bio-diverse plant root-soil interface, hosts many hydrologic and biochemical processes, including nutrient cycling, hydraulic redistribution, and soil carbon dynamics among others. The biogeochemical function of root networks, including the facilitation of nutrient cycling through absorption and rhizodeposition, interaction with micro-organisms and fungi, contribution to biomass, etc., plays an important role in myriad Critical Zone processes. Despite this knowledge, the role of the rhizosphere on watershed-scale ecohydrologic functions in the Critical Zone has not been fully characterized, and specifically, the extensive capabilities of reactive transport models (RTMs) have not been applied to these hydrobiogeochemical dynamics. This study uniquely links rhizospheric processes with reactive transport modeling to couple soil biogeochemistry, biological processes, hydrologic flow, hydraulic redistribution, and vegetation dynamics. Key factors in the novel modeling approach are: (i) bi-directional effects of root-soil interaction, such as simultaneous root exudation and nutrient absorption; (ii) multi-state biomass fractions in soil (i.e. living, dormant, and dead biological and root materials); (iii) expression of three-dimensional fluxes to represent both vertical and lateral interconnected flows and processes; and (iv) the potential to include the influence of non-stationary external forcing and climatic factors. We anticipate that the resulting model will demonstrate the extensive effects of plant root dynamics on ecohydrologic functions at the watershed scale and will ultimately contribute to a better characterization of efflux from both agricultural and natural systems.

Transfer of fallout radionuclides derived from Fukushima NPP accident: 1 year study on transfer of radionuclides through hydrological processes

NASA Astrophysics Data System (ADS)

Onda, Yuichi; Kato, Hiroaki; Patin, Jeremy; Yoshimura, Kazuya; Tsujimura, Maki; Wakahara, Taeko; Fukushima, Takehiko

2013-04-01

Previous experiences such as Chernobyl Nuclear Power Plant accident have confirmed that fallout radionuclides on the ground surface migrate through natural environment including soils and rivers. Therefore, in order to estimate future changes in radionuclide deposition, migration process of radionuclides in forests, soils, ground water, rivers should be monitored. However, such comprehensive studies on migration through forests, soils, ground water and rivers have not been conducted so far. Here, we present the following comprehensive investigation was conducted to confirm migration of radionuclides through natural environment including soils and rivers. 1)Study on depth distribution of radiocaesium in soils within forests, fields, and grassland 2)Confirmation of radionuclide distribution and investigation on migration in forests 3)Study on radionuclide migration due to soil erosion under different land use 4)Measurement of radionuclides entrained from natural environment including forests and soils 5)Investigation on radionuclide migration through soil water, ground water, stream water, spring water under different land use 6)Study on paddy-to-river transfer of radionuclides through suspended sediments 7)Study on river-to-ocean transfer of radionuclides via suspended sediments 8)Confirmation of radionuclide deposition in ponds and reservoirs

Multivariate analysis of the geochemistry and mineralogy of soils along two continental-scale transects in North America

USGS Publications Warehouse

Drew, L.J.; Grunsky, E.C.; Sutphin, D.M.; Woodruff, L.G.

2010-01-01

Soils collected in 2004 along two North American continental-scale transects were subjected to geochemical and mineralogical analyses. In previous interpretations of these analyses, data were expressed in weight percent and parts per million, and thus were subject to the effect of the constant-sum phenomenon. In a new approach to the data, this effect was removed by using centered log-ratio transformations to 'open' the mineralogical and geochemical arrays. Multivariate analyses, including principal component and linear discriminant analyses, of the centered log-ratio data reveal the effects of soil-forming processes, including soil parent material, weathering, and soil age, at the continental-scale of the data arrays that were not readily apparent in the more conventionally presented data. Linear discriminant analysis of the data arrays indicates that the majority of the soil samples collected along the transects can be more successfully classified with Level 1 ecological regional-scale classification by the soil geochemistry than soil mineralogy. A primary objective of this study is to discover and describe, in a parsimonious way, geochemical processes that are both independent and inter-dependent and manifested through compositional data including estimates of the elements and corresponding mineralogy. ?? 2010.

Transfer of fallout radionuclides derived from Fukushima NPP accident: 1 year study on transfer of radionuclides through geomorphic processes

NASA Astrophysics Data System (ADS)

Onda, Y.; Kato, H.; Fukushima, T.; Wakahara, T.; Kita, K.; Takahashi, Y.; Sakaguchi, A.; Tanaka, K.; Yamashiki, Y.; Yoshida, N.

2012-12-01

After the Fukushima Daiichi Nuclear Power Plant acciden, fallout radionuclides on the ground surface will transfer through geomorphic processes. Therefore, in order to estimate future changes in radionuclide deposition, migration process of radionuclides in forests, soils, ground water, rivers, and entrainment from trees and soils should be confirmed. We (FMWSE group) was funded by MEXT, Japanese government, and 1 year following monitoring has been conducted about 1 year. 1 Migration study of radionuclides in natural environment including forests and rivers 1) Study on depth distribution of radiocaesium in soils within forests, fields, and grassland. 2) Confirmation of radionuclide distribution and investigation on migration in forests. 3) Study on radionuclide migration due to soil erosion under different land use. 4) Measurement of radionuclides entrained from natural environment including forests and soils. 2 Migration study of radionuclides through hydrological cycle such as soil water, rivers, lakes and ponds, ground water. 1) Investigation on radionuclide migration through soil water, ground water, stream water, spring water under different land use. 2) Study on paddy-to-river transfer of radionuclides through suspended sediment. 3) Study on river-to-ocean transfer of radionuclides via suspended sediment. 4) Confirmation of radionuclide deposition in ponds and reservoirs. We will present how and where the fallout radionulides transfter through geomorphic processes.

ASSESSING DETOXIFICATION AND DEGRADATION OF WOOD PRESERVING AND PETROLEUM WASTES IN CONTAMINATED SOIL

EPA Science Inventory

This study was undertaken to evaluate in-situ soil bioremediation processes, including degradation and detoxification, for two types of wood preserving wastes and two types of petroleum refining wastes at high concentrations in an unacclimated soil. The soil solid phase, water so...

Altered basaltic glass - A terrestrial analog to the soil of Mars

NASA Technical Reports Server (NTRS)

Allen, C. C.; Jercinovic, M.; Keil, K.; Gooding, J. L.

1981-01-01

In order to understand the nature of weathering processes and the formation of clay-like substances on Mars, analogous terrestrial processes and materials have been examined including sideromelane and palagonite. It is shown that palagonite is a good analog to the soil of Mars to the level of precision available from Viking and ground-based telescopic spectral measurements. Points of resemblance between the two materials include bulk chemical composition, particle size, reflectance spectra, and magnetic properties. A mechanism for the formation of Martian soil, based on a palagonite model, is proposed.

Relevant magnetic and soil parameters as potential indicators of soil conservation status of Mediterranean agroecosystems

NASA Astrophysics Data System (ADS)

Quijano, Laura; Chaparro, Marcos A. E.; Marié, Débora C.; Gaspar, Leticia; Navas, Ana

2014-09-01

The main sources of magnetic minerals in soils unaffected by anthropogenic pollution are iron oxides and hydroxides derived from parent materials through soil formation processes. Soil magnetic minerals can be used as indicators of environmental factors including soil forming processes, degree of pedogenesis, weathering processes and biological activities. In this study measurements of magnetic susceptibility are used to detect the presence and the concentration of soil magnetic minerals in topsoil and bulk samples in a small cultivated field, which forms a hydrological unit that can be considered to be representative of the rainfed agroecosystems of Mediterranean mountain environments. Additional magnetic studies such as isothermal remanent magnetization (IRM), anhysteretic remanent magnetization (ARM) and thermomagnetic measurements are used to identify and characterize the magnetic mineralogy of soil minerals. The objectives were to analyse the spatial variability of the magnetic parameters to assess whether topographic factors, soil redistribution processes, and soil properties such as soil texture, organic matter and carbonate contents analysed in this study, are related to the spatial distribution pattern of magnetic properties. The medians of mass specific magnetic susceptibility at low frequency (χlf) were 36.0 and 31.1 × 10-8 m3 kg-1 in bulk and topsoil samples respectively. High correlation coefficients were found between the χlf in topsoil and bulk core samples (r = 0.951, p < 0.01). In addition, volumetric magnetic susceptibility was measured in situ in the field (κis) and values varied from 13.3 to 64.0 × 10-5 SI. High correlation coefficients were found between χlf in topsoil measured in the laboratory and volumetric magnetic susceptibility field measurements (r = 0.894, p < 0.01). The results obtained from magnetic studies such as IRM, ARM and thermomagnetic measurements show the presence of magnetite, which is the predominant magnetic carrier, and hematite. The predominance of superparamagnetic minerals in upper soil layers suggests enrichment in pedogenic minerals. The finer soil particles, the organic matter content and the magnetic susceptibility values are statistically correlated and their spatial variability is related to similar physical processes. Runoff redistributes soil components including magnetic minerals and exports fine particles out the field. This research contributed to further knowledge on the application of soil magnetic properties to derive useful information on soil processes in Mediterranean cultivated soils.

Future Carbon Dynamics of the Northern Rockies Ecoregion due to Climate Impacts and Fire Effects

NASA Astrophysics Data System (ADS)

Weller, U.; Lang, B.; Rabot, E.; Stössel, B.; Urbanski, L.; Vogel, H. J.; Wiesmeier, M.; Wollschlaeger, U.

2016-12-01

The impact of agricultural management on soil functions is manifold and severe. It has both positive and adverse influence. Our goal is to develop model tools quantifying the agricultural impact on soil functions based on a mechanistic understanding of soil processes to support farmers and decision makers. The modeling approach is based on defining relevant soil components, i.e. soil matrix, macropores, organisms, roots and organic matter. They interact and form the soil's macroscopic properties and functions including water and gas dynamics, and biochemical cycles. Based on existing literature information we derive functional interaction processes and combine them in a network of dynamic soil components. In agricultural soils, a major issue is linked to changes in soil structure and their influence on water dynamics. Compaction processes are well studied in literature, but for the resilience due to root growth and activity of soil organisms the information is scarcer. We implement structural dynamics into soil water and gas simulations using a lumped model that is both coarse enough to allow extensive model runs while still preserving some important, yet rarely modeled phenomenons like preferential flow, hysteretic and dynamic behavior. For simulating water dynamics, at each depth, the model assumes water at different binding energies depending on soil structure, i.e. the pore size distribution. Non-equilibrium is postulated, meaning that free water may occur even if the soil is not fully saturated. All energy levels are interconnected allowing water to move, both within a spatial node, and between neighboring nodes (adding gravity). Structure dynamics alters the capacity of this water compartments, and the conductance of its connections. Connections are switched on and off depending on whether their sources contain water or their targets have free capacity. This leads to piecewise linear system behavior that allows fast calculation for extended time steps. Based on this concept, the dynamics of soil structure can be directly linked to soil water dynamics as a main driver for other soil processes. Further steps will include integration of temperature and solute leaching as well as defining the feedback of the water regime on the structure forming processes.

Life cycle of soil sggregates: from root residue to microbial and physical hotspots

NASA Astrophysics Data System (ADS)

Ghezzehei, T. A.; Or, D.

2017-12-01

Soil aggregation is a physical state of soil in which clumps of primary soil particles are held together by biological and/or chemical cementing agents. Aggregations plays important role in storage and movement of water and essential gases, nutrient cycling, and ultimately supporting microbial and plant life. It is also one of the most dynamic and sensitive soil qualities, which readily responds to disturbances such as cultivation, fire, drought, flooding, and changes in vegetation. Soil aggregation that is primarily controlled by organic matter generally exhibits hierarchical organization of soil constituents into stable units that range in size from a few microns to centimeters. However, this conceptual model of soil aggregation as the key unifying mechanism remains poorly quantified and is rarely included in predictive soil models. Here we provide a biophysical framework for quantitative and predictive modeling of soil aggregation and its attendant soil characteristics. The framework treats aggregates as hotspots of biological, chemical and physical processes centered around roots and root residue. We keep track of the life cycle of an individual aggregate from it genesis in the rhizosphere, fueled by rhizodeposition and mediated by vigorous microbial activity, until its disappearance when the root-derived resources are depleted. The framework synthesizes current understanding of microbial life in porous media; water holding and soil binding capacity of biopolymers; and environmental controls on soil organic matter dynamics. The framework paves a way for integration of processes that are presently modeled as disparate or poorly coupled processes, including storage and protection of carbon, microbial activity, greenhouse gas fluxes, movement and storage of water, resistance of soils against erosion.

The Cannona Data Base: long-term field data for studies on soil management impact on runoff and erosion processes.

NASA Astrophysics Data System (ADS)

Biddoccu, Marcella; Ferraris, Stefano; Opsi, Francesca; Cavallo, Eugenio

2014-05-01

Long-term data have been collected by IMAMOTER-CNR from field-scale vineyard plots within the Tenuta Cannona Vine and Wine Experimental Centre of Regione Piemonte, which is located in a valuable vine production area in north-western Italy. Since 2000, runoff and soil erosion monitoring has been carried out under natural rainfall conditions on three parallel field plots (75 m long and 16,5 m wide, slope gradient about 15%) that are conducted with different inter-rows soil management techniques (conventional tillage, reduced tillage, controlled grass cover). Experimental plots are part of a 16-hectars experimental vineyard, managed in according to conventional farming for wine production. Recurrent surveys have been carried out in the runoff plots to investigate spatial and temporal variability of the soil bulk density, soil moisture and penetration resistance. The primary intent of the program was to evaluate the effects of agricultural management practices and tractor traffic on the hydrologic, soil erosion and soil compaction processes in vineyard. The Cannona Data Base (CDB) represents a data collection which is unique in Italy, showing the response of soil to rainfall in terms of runoff and soil erosion over more than a decade. It includes data for more than 200 runoff events and over 70 soil loss events; moreover, periodic measurements for soil physical characteristics are included for the three plots. The CDB can now be accessed via a website supported by the CNR, that is addressed to water and land management researchers and professionals. The CDB is currently used to calibrate a model for runoff and soil erosion prediction in vineyard environment. The CDB website includes a descriptive and informative section, which contains results of over than 10 years of experimental activity, reports and presentations, addressed to enhance the awareness of citizens and stakeholders about land degradation processes and about impacts of different soil management practices on water and soil conservation. The monitoring activities at the Cannona Experimental Site are currently carried out and implemented in order to improve the understanding of the soil management effects on soil hydrology, erosion and compaction in sloping vineyards. Land use and soil management strongly influence the hydrologic processes in the soil. In Italy vines are widely cultivated on hills and mountain slopes, within areas which are frequently affected by landslides. Such natural events are strictly related to hydrologic behavior of the soil, that drives the runoff formation on slopes and the consequent sediment delivery to water courses. Data from the CDB could be used in a multidisciplinary approach to investigate interactions among land use/ soil management and natural processes at different scales.

Human relations with soil are changing rapidly: SSSA's new Work Group on Soil Change

USDA-ARS?s Scientific Manuscript database

Humanity has rapidly become Earth’s chief agent of soil change, and geologists have named the epoch in which we live the Anthropocene, due to the global scale of human impact on the environment, including soil. In response to the increasing influence of humans on soil processes, the disciplines of ...

Process for removing polychlorinated biphenyls from soil

DOEpatents

Hancher, C.W.; Saunders, M.B.; Googin, J.M.

1984-11-16

The present invention relates to a method of removing polychlorinated biphenyls from soil. The polychlorinated biphenyls are extracted from the soil by employing a liquid organic solvent dispersed in water in the ratio of about 1:3 to 3:1. The organic solvent includes such materials as short-chain hydrocarbons including kerosene or gasoline which are immiscible with water and are nonpolar. The organic solvent has a greater affinity for the PCB's than the soil so as to extract the PCB's from the soil upon contact. The organic solvent phase is separated from the suspended soil and water phase and distilled for permitting the recycle of the organic solvent phase and the concentration of the PCB's in the remaining organic phase. The present process can be satisfactorily practiced with soil containing 10 to 20% petroleum-based oils and organic fluids such as used in transformers and cutting fluids, coolants and the like which contain PCB's. The subject method provides for the removal of a sufficient concentration of PCB's from the soil to provide the soil with a level of PCB's within the guidelines of the Environmental Protection Agency.

SITE Technology Capsule. Demonstration of Rocky Mountain Remediation Services Soil Amendment

EPA Science Inventory

This report briefly summarizes the Rocky Mountain Remediation Services treatment technology demonstration of a soil amendment process for lead contaminated soil at Roseville, OH. The evaluation included leaching, bioavailability, geotechnical, and geochemical methods.

Soil Moisture: The Hydrologic Interface Between Surface and Ground Waters

NASA Technical Reports Server (NTRS)

Engman, Edwin T.

1997-01-01

A hypothesis is presented that many hydrologic processes display a unique signature that is detectable with microwave remote sensing. These signatures are in the form of the spatial and temporal distributions of surface soil moisture. The specific hydrologic processes that may be detected include groundwater recharge and discharge zones, storm runoff contributing areas, regions of potential and less than potential evapotranspiration (ET), and information about the hydrologic properties of soils. In basin and hillslope hydrology, soil moisture is the interface between surface and ground waters.

Microbial ecology and biogeochemistry of continental Antarctic soils.

PubMed

Cowan, Don A; Makhalanyane, Thulani P; Dennis, Paul G; Hopkins, David W

2014-01-01

The Antarctica Dry Valleys are regarded as the coldest hyperarid desert system on Earth. While a wide variety of environmental stressors including very low minimum temperatures, frequent freeze-thaw cycles and low water availability impose severe limitations to life, suitable niches for abundant microbial colonization exist. Antarctic desert soils contain much higher levels of microbial diversity than previously thought. Edaphic niches, including cryptic and refuge habitats, microbial mats and permafrost soils all harbor microbial communities which drive key biogeochemical cycling processes. For example, lithobionts (hypoliths and endoliths) possess a genetic capacity for nitrogen and carbon cycling, polymer degradation, and other system processes. Nitrogen fixation rates of hypoliths, as assessed through acetylene reduction assays, suggest that these communities are a significant input source for nitrogen into these oligotrophic soils. Here we review aspects of microbial diversity in Antarctic soils with an emphasis on functionality and capacity. We assess current knowledge regarding adaptations to Antarctic soil environments and highlight the current threats to Antarctic desert soil communities.

The nature and classification of Australian soils affected by sodium

NASA Astrophysics Data System (ADS)

Murphy, Brian; Greene, Richard; Harms, Ben

2017-04-01

Large areas of Australia are affected by the processes of salinity and sodicity and they are important processes to understand as they can result in the degradation of agricultural lands used for both intensive cropping and extensive grazing practices. Sodic soils are defined as those having ESP of at least 6% in Australia. Northcote and Skene (1972) estimated that of Australia's total area of 770 M ha, 39 M ha was affected by salinity and 193-257 M ha by sodicity. However, in a more recent publication, Rengasamy (2006), quoted the areas of saline and sodic soils as 66 M ha and 340 M ha respectively. The soils affected by sodium in Australia include a large group of contrasting soils (Northcote and Skene 1972). Based on the Australian soil classification, included are: • Alkaline strongly sodic to sodic clay soils with uniform texture profiles - largely Vertosols 666 400 km2 • Alkaline strongly sodic to sodic coarse and medium textured soils with uniform and gradational texture profiles - largely Calcarosols 600 700 km2 • Alkaline strongly sodic to sodic texture contrast soils - largely Sodosols 454 400 km2 • Non-alkaline sodic and strongly sodic neutral texture contrast soils - largely Sodosols 134 700 km2 • Non-alkaline sodic acid texture contrast soils - Sodosols and Kurosols 140 700 km2 Many Australian sodic soils have not developed by the traditional solonetz process of leaching of a solonchak, but rather have developed by the accumulation of sodium on the cation exchange complex in preference to the other exchangeable cations without any recognisable intermediate saline phase occurring. This is especially the case for the sodic, non-alkaline texture contrast soils or Sodosols. The major sodic soil group in WRB is the Solonetz soils. These require the presence of a Natric horizon which has to contain illuviated clay and at least 15% ESP. However, there is provision for Sodic qualifiers with at least 6% ESP for many other reference Soil Groups including the Vertisols, Luvisols, Calcisols and Planosols which would have some relationship to Australia's sodic soils.

Mechanisms of Soil Aggregation: a biophysical modeling framework

NASA Astrophysics Data System (ADS)

Ghezzehei, T. A.; Or, D.

2016-12-01

Soil aggregation is one of the main crosscutting concepts in all sub-disciplines and applications of soil science from agriculture to climate regulation. The concept generally refers to adhesion of primary soil particles into distinct units that remain stable when subjected to disruptive forces. It is one of the most sensitive soil qualities that readily respond to disturbances such as cultivation, fire, drought, flooding, and changes in vegetation. These changes are commonly quantified and incorporated in soil models indirectly as alterations in carbon content and type, bulk density, aeration, permeability, as well as water retention characteristics. Soil aggregation that is primarily controlled by organic matter generally exhibits hierarchical organization of soil constituents into stable units that range in size from a few microns to centimeters. However, this conceptual model of soil aggregation as the key unifying mechanism remains poorly quantified and is rarely included in predictive soil models. Here we provide a biophysical framework for quantitative and predictive modeling of soil aggregation and its attendant soil characteristics. The framework treats aggregates as hotspots of biological, chemical and physical processes centered around roots and root residue. We keep track of the life cycle of an individual aggregate from it genesis in the rhizosphere, fueled by rhizodeposition and mediated by vigorous microbial activity, until its disappearance when the root-derived resources are depleted. The framework synthesizes current understanding of microbial life in porous media; water holding and soil binding capacity of biopolymers; and environmental controls on soil organic matter dynamics. The framework paves a way for integration of processes that are presently modeled as disparate or poorly coupled processes, including storage and protection of carbon, microbial activity, greenhouse gas fluxes, movement and storage of water, resistance of soils against erosion.

Soil erodibility for water erosion: A perspective and Chinese experiences

NASA Astrophysics Data System (ADS)

Wang, Bin; Zheng, Fenli; Römkens, Mathias J. M.; Darboux, Frédéric

2013-04-01

Knowledge of soil erodibility is an essential requirement for erosion prediction, conservation planning, and the assessment of sediment related environmental effects of watershed agricultural practices. This paper reviews the status of soil erodibility evaluations and determinations based on 80 years of upland area erosion research mainly in China and the USA. The review synthesizes the general research progress made by discussing the basic concepts of erodibility and its evaluation, determination, and prediction as well as knowledge of its spatio-temporal variations. The authors found that soil erodibility is often inappropriately or inaccurately applied in describing soil loss caused by different soil erosion component processes and mechanisms. Soil erodibility indicators were related to intrinsic soil properties and exogenic erosional forces, measurements, and calculations. The present review describes major needs including: (1) improved definition of erodibility, (2) modified erodibility determinations in erosion models, especially for specific geographical locations and in the context of different erosion sub-processes, (3) advanced methodologies for quantifying erodibilities of different soil erosion sub-processes, and (4) a better understanding of the mechanism that causes temporal variations in soil erodibility. The review also provides a more rational basis for future research on soil erodibility and supports predictive modeling of soil erosion processes and the development of improved conservation practices.

Optimization of a Sample Processing Protocol for Recovery of ...

EPA Pesticide Factsheets

Journal Article Following a release of Bacillus anthracis spores into the environment, there is a potential for lasting environmental contamination in soils. There is a need for detection protocols for B. anthracis in environmental matrices. However, identification of B. anthracis within a soil is a difficult task. Processing soil samples helps to remove debris, chemical components, and biological impurities that can interfere with microbiological detection. This study aimed to optimize a previously used indirect processing protocol, which included a series of washing and centrifugation steps.

Using Rare Earth Elements (REE) to determine wind-driven soil dispersal from a point source

USDA-ARS?s Scientific Manuscript database

Although erosion of soil by water is a predictably directional process, the erosion of soil by wind is determined by wind direction on an event-wise basis. The wind-driven dispersal patterns of chemical constituents including natural soil components and anthropogenic contaminants are not well under...

A soil-landscape framework for understanding spatial and temporal variability in biogeochemical processes in catchments

NASA Astrophysics Data System (ADS)

McGuire, K. J.; Bailey, S. W.; Ross, D. S.

2017-12-01

Heterogeneity in biophysical properties within catchments challenges how we quantify and characterize biogeochemical processes and interpret catchment outputs. Interactions between the spatiotemporal variability of hydrological states and fluxes and soil development can spatially structure catchments, leading to a framework for understanding patterns in biogeochemical processes. In an upland, glaciated landscape at the Hubbard Brook Experimental Forest (HBEF) in New Hampshire, USA, we are embracing the structure and organization of soils to understand the spatial relations between runoff production zones, distinct soil-biogeochemical environments, and solute retention and release. This presentation will use observations from the HBEF to demonstrate that a soil-landscape framework is essential in understanding the spatial and temporal variability of biogeochemical processes in this catchment. Specific examples will include how laterally developed soils reveal the location of active runoff production zones and lead to gradients in primary mineral dissolution and the distribution of weathering products along hillslopes. Soil development patterns also highlight potential carbon and nitrogen cycling hotspots, differentiate acidic conditions, and affect the regulation of surface water quality. Overall, this work demonstrates the importance of understanding the landscape-level structural organization of soils in characterizing the variation and extent of biogeochemical processes that occur in catchments.

Misrepresentation of hydro-erosional processes in rainfall simulations using disturbed soil samples

NASA Astrophysics Data System (ADS)

Thomaz, Edivaldo L.; Pereira, Adalberto A.

2017-06-01

Interrill erosion is a primary soil erosion process which consists of soil detachment by raindrop impact and particle transport by shallow flow. Interill erosion affects other soil erosion sub-processes, e.g., water infiltration, sealing, crusting, and rill initiation. Interrill erosion has been widely studied in laboratories, and the use of a sieved soil, i.e., disturbed soil, has become a standard method in laboratory experiments. The aims of our study are to evaluate the hydro-erosional response of undisturbed and disturbed soils in a laboratory experiment, and to quantify the extent to which hydraulic variables change during a rainstorm. We used a splash pan of 0.3 m width, 0.45 m length, and 0.1 m depth. A rainfall simulation of 58 mm h- 1 lasting for 30 min was conducted on seven replicates of undisturbed and disturbed soils. During the experiment, several hydro-physical parameters were measured, including splashed sediment, mean particle size, runoff, water infiltration, and soil moisture. We conclude that use of disturbed soil samples results in overestimation of interrill processes. Of the nine assessed parameters, four displayed greater responses in the undisturbed soil: infiltration, topsoil shear strength, mean particle size of eroded particles, and soil moisture. In the disturbed soil, five assessed parameters displayed greater responses: wash sediment, final runoff coefficient, runoff, splash, and sediment yield. Therefore, contextual soil properties are most suitable for understanding soil erosion, as well as for defining soil erodibility.

SLAPex Freeze/Thaw 2015: The First Dedicated Soil Freeze/Thaw Airborne Campaign

NASA Technical Reports Server (NTRS)

Kim, Edward; Wu, Albert; DeMarco, Eugenia; Powers, Jarrett; Berg, Aaron; Rowlandson, Tracy; Freeman, Jacqueline; Gottfried, Kurt; Toose, Peter; Roy, Alexandre;

Analysis of large soil samples for actinides

DOEpatents

Maxwell, III; Sherrod, L [Aiken, SC

2009-03-24

A method of analyzing relatively large soil samples for actinides by employing a separation process that includes cerium fluoride precipitation for removing the soil matrix and precipitates plutonium, americium, and curium with cerium and hydrofluoric acid followed by separating these actinides using chromatography cartridges.

ENGINEERING BULLETIN: SEPARATION/CONCENTRATION TECHNOLOGY ALTERNATIVES FOR THE REMEDIATION OF PESTICIDE-CONTAMINATED SOIL

EPA Science Inventory

Pesticide contamination includes a wide variety of compounds and may result from manufacturing improper storage, handling, disposal; or agricultural processes. It can occur in soil and can lead to secondary contamination of groundwater. Remediation of pesticide-contaminated soils...

Low carbon amendment rates during anaerobic soil disinfestation (ASD) at moderate soil temperatures do not decrease viability of Sclerotinia sclerotiorum sclerotia or Fusarium root rot of common bean

USDA-ARS?s Scientific Manuscript database

Anaerobic soil disinfestation (ASD; also termed biological soil disinfestation) is a non-chemical process which includes 1) soil incorporation of a labile carbon (C) source, 2) mulching with polyethylene film to limit gas exchange, and 3) drip irrigation to saturation of the topsoil or bedded area. ...

Generic reactive transport codes as flexible tools to integrate soil organic matter degradation models with water, transport and geochemistry in soils

NASA Astrophysics Data System (ADS)

Jacques, Diederik; Gérard, Fréderic; Mayer, Uli; Simunek, Jirka; Leterme, Bertrand

2016-04-01

A large number of organic matter degradation, CO2 transport and dissolved organic matter models have been developed during the last decades. However, organic matter degradation models are in many cases strictly hard-coded in terms of organic pools, degradation kinetics and dependency on environmental variables. The scientific input of the model user is typically limited to the adjustment of input parameters. In addition, the coupling with geochemical soil processes including aqueous speciation, pH-dependent sorption and colloid-facilitated transport are not incorporated in many of these models, strongly limiting the scope of their application. Furthermore, the most comprehensive organic matter degradation models are combined with simplified representations of flow and transport processes in the soil system. We illustrate the capability of generic reactive transport codes to overcome these shortcomings. The formulations of reactive transport codes include a physics-based continuum representation of flow and transport processes, while biogeochemical reactions can be described as equilibrium processes constrained by thermodynamic principles and/or kinetic reaction networks. The flexibility of these type of codes allows for straight-forward extension of reaction networks, permits the inclusion of new model components (e.g.: organic matter pools, rate equations, parameter dependency on environmental conditions) and in such a way facilitates an application-tailored implementation of organic matter degradation models and related processes. A numerical benchmark involving two reactive transport codes (HPx and MIN3P) demonstrates how the process-based simulation of transient variably saturated water flow (Richards equation), solute transport (advection-dispersion equation), heat transfer and diffusion in the gas phase can be combined with a flexible implementation of a soil organic matter degradation model. The benchmark includes the production of leachable organic matter and inorganic carbon in the aqueous and gaseous phases, as well as different decomposition functions with first-order, linear dependence or nonlinear dependence on a biomass pool. In addition, we show how processes such as local bioturbation (bio-diffusion) can be included implicitly through a Fickian formulation of transport of soil organic matter. Coupling soil organic matter models with generic and flexible reactive transport codes offers a valuable tool to enhance insights into coupled physico-chemical processes at different scales within the scope of C-biogeochemical cycles, possibly linked with other chemical elements such as plant nutrients and pollutants.

Radioisotope tracer approach for understanding the impacts of global change-induced pedoturbation on soil C dynamics

NASA Astrophysics Data System (ADS)

Gonzalez-Meler, M. A.; Sturchio, N. C.; Sanchez-de Leon, Y.; Blanc-Betes, E.; Taneva, L.; Poghosyan, A.; Norby, R. J.; Filley, T. R.; Guilderson, T. P.; Welker, J. M.

2010-12-01

Biogeochemical carbon-cycle feedbacks to climate are apparent but uncertain, primarily because of gaps in mechanistic understanding on the ecosystem processes that drive carbon cycling and storage in terrestrial ecosystems, particularly in soils. Recent findings are increasingly recognizing the interaction between soil biota and the soil physical environment. Soil carbon turnover is partly determined by burial of organic matter and its physical and chemical protection. These factors are potentially affected by changes in climate (freezing-thawing or wet-drying cycles) or ecosystem structure including biological invasions. A major impediment to understanding dynamics of soil C in terrestrial systems is our inability to measure soil physical processes such as soil mixing rates or turnover of soil structures, including aggregates. Here we present a multiple radioisotope tracer approach (naturally occurring and man-made) to measure soil mixing rates in response to global change. We will present evidence of soil mixing rate changes in a temperate forest exposed to increased levels of atmospheric CO2 and in a tundra ecosystem exposed to increased thermal insulation. In both cases, radioisotope tracers proved to be an effective way to measure effects of global change on pedoturbation. Results also provided insights into the specific mechanisms involved in the responses. Elevated CO2 resulted in deeper soil mixing cells (increased by about 5cm on average) when compared to control soils as a consequence of changes in biota (increased root growth, higher earthworm density). In the tundra, soil warming induced higher rates of cryoturbation, resulting in what appears to be a net uplift of organic matter to the surface thereby exposing deeper C to decomposers. In both cases, global change factors affected the vertical distribution of C and changed the amount of bulk soil actively involved in soil processes. As a consequence, comparisons of C budgets to a given soil depth in response to global change factors may be misleading if they do not account for the depth change in the soil mixing cells.

Chemical and Physical Interactions of Martian Surface Material

NASA Astrophysics Data System (ADS)

Bishop, J. L.

1999-09-01

A model of alteration and maturation of the Martian surface material is described involving both chemical and physical interactions. Physical processes involve distribution and mixing of the fine-grained soil particles across the surface and into the atmosphere. Chemical processes include reaction of sulfate, salt and oxidizing components of the soil particles; these agents in the soils deposited on rocks will chew through the rock minerals forming coatings and will bind surface soils together to form duricrust deposits. Formation of crystalline iron oxide/oxyhydroxide minerals through hydrothermal processes and of poorly crystalline and amorphous phases through palagonitic processes both contribute to formation of the soil particles. Chemical and physical alteration of these soil minerals and phases contribute to producing the chemical, magnetic and spectroscopic character of the Martian soil as observed by Mars Pathfinder and Mars Global Surveyor. Minerals such as maghemite/magnetite and jarosite/alunite have been observed in terrestrial volcanic soils near steam vents and may be important components of the Martian surface material. The spectroscopic properties of several terrestrial volcanic soils containing these minerals have been analyzed and evaluated in terms of the spectroscopic character of the surface material on Mars.

Site-level model intercomparison of high latitude and high altitude soil thermal dynamics in tundra and barren landscapes

NASA Astrophysics Data System (ADS)

Ekici, A.; Chadburn, S.; Chaudhary, N.; Hajdu, L. H.; Marmy, A.; Peng, S.; Boike, J.; Burke, E.; Friend, A. D.; Hauck, C.; Krinner, G.; Langer, M.; Miller, P. A.; Beer, C.

2015-07-01

Modeling soil thermal dynamics at high latitudes and altitudes requires representations of physical processes such as snow insulation, soil freezing and thawing and subsurface conditions like soil water/ice content and soil texture. We have compared six different land models: JSBACH, ORCHIDEE, JULES, COUP, HYBRID8 and LPJ-GUESS, at four different sites with distinct cold region landscape types, to identify the importance of physical processes in capturing observed temperature dynamics in soils. The sites include alpine, high Arctic, wet polygonal tundra and non-permafrost Arctic, thus showing how a range of models can represent distinct soil temperature regimes. For all sites, snow insulation is of major importance for estimating topsoil conditions. However, soil physics is essential for the subsoil temperature dynamics and thus the active layer thicknesses. This analysis shows that land models need more realistic surface processes, such as detailed snow dynamics and moss cover with changing thickness and wetness, along with better representations of subsoil thermal dynamics.

Soil and Water Indicators of the Sustainable Rangelands Roundtable

Treesearch

M.G. Sherm Karl; D.A. Pyke; P.T. Tueller; G.E. Schuman; R.W. Shafer; S.J. Borchard; D.T. Booth; W.G. Ypsilantis; R.H. Jr. Barrett

2006-01-01

The Sustainable Rangelands Roundtable (SRR) has explicitly included conservation and maintenance of soil and water resources as a criterion, a category of conditions or processes that can be assessed nationally to determine if the current level of rangeland management will ensure sustainability. Within the soil/water criterion, 10 indicators, 5 soil-based and 5 water-...

Soil as a Sustainable Resource for the Bioeconomy - BonaRes

NASA Astrophysics Data System (ADS)

Wollschläger, Ute; Amelung, Wulf; Brüggemann, Nicolas; Brunotte, Joachim; Gebbers, Robin; Grosch, Rita; Heinrich, Uwe; Helming, Katharina; Kiese, Ralf; Leinweber, Peter; Reinhold-Hurek, Barbara; Veldkamp, Edzo; Vogel, Hans-Jörg; Winkelmann, Traud

2017-04-01

Fertile soils are a fundamental resource for the production of biomass and provision of food and energy. A growing world population and latest climate targets lead to an increasing demand for bio-based products which require preserving and - ideally - improving the long-term productivity of soils as a bio-economic resource. At the same time, other soil functions and ecosystem services need to be maintained: filter for clean water, carbon sequestration, provision and recycling of nutrients, and habitat for biological activity. All these soil functions result from the interaction of a multitude of physical, chemical and biological processes which are insufficiently understood. In addition, we lack understanding about the interplay between the socio-economic system and the soil system and how soil functions benefit human wellbeing, including SDGs. However, a solid and integrated assessment of soil quality requires the consideration of the ensemble of soil functions and its relation to soil management. To make soil management sustainable, we need to establish a scientific knowledge base of complex soil system processes that allows for developing models and tools to quantitatively predict the impact of a multitude of management measures on soil functions. This will finally allow for the provision of options for a site-specific, sustainable soil management. To face this challenge, the German Federal Ministry of Education and Research (BMBF) recently launched the funding program "Soil as a Sustainable Resource for the Bioeconomy - BonaRes". In a joint effort, ten collaborative projects and the coordinating BonaRes Centre are engaged to close existing knowledge gaps for a profound and systemic assessment and understanding of soil functions and their sensitivity to soil management. In BonaRes, the complete process chain of sustainable soil use in the context of a sustainable bio-economy is being addressed: from understanding of soil processes using state-of the art and novel measurement and modelling techniques towards soil functions and ecosystem services driving the development of assessment and decision support tools for a sustainable soil management. To this end, soil scientists and researchers from several other disciplines including social sciences are collaborating closely. Besides a better understanding of fundamental soil processes from each of the collaborative projects and the development of novel measurement techniques and models, the outcome of the joint BonaRes programme will be a web-based portal (www.bonares.de) providing information, knowledge, models, a data repository with doi-referenced, internationally available, open soil data from the BonaRes funding initiative and beyond, as well as decision support options for a sustainable soil management. This presentation will provide an overview about the BonaRes funding initiative and the research conducted therein.

GPR monitoring for non-uniform infiltration through a high permeable gravel layer in the test sand box

NASA Astrophysics Data System (ADS)

Kuroda, Seiichiro; Ishii, Nobuyuki; Morii, Toshihiro

2017-04-01

Recently capillary barriers have been known as a method to protect subsurface regions against infiltration from soil surface. It has essentially non-uniform structure of permeability or soil physical property. To identify the function of the capillary barrier, the site-characterization technique for non-uniform soil moisture distribution and infiltration process is needed. We built a sand box in which a thin high-permeable gravel layer was embedded and conducted a infiltration test, including non-uniform flow of soil water induced by capillary barrier effects. We monitored this process by various types of GPR measurements, including time-lapsed soundings with multi-frequency antenna and transmission measurements like one using cross-borehole radar. Finally we will discuss the applicability of GPR for monitoring the phenomena around the capillary barrier of soil. This work has partially supported by JSPS Grant-in-aid Scientific Research program, No.16H02580.

The underlying processes of a soil mite metacommunity on a small scale.

PubMed

Dong, Chengxu; Gao, Meixiang; Guo, Chuanwei; Lin, Lin; Wu, Donghui; Zhang, Limin

2017-01-01

Metacommunity theory provides an understanding of how ecological processes regulate local community assemblies. However, few field studies have evaluated the underlying mechanisms of a metacommunity on a small scale through revealing the relative roles of spatial and environmental filtering in structuring local community composition. Based on a spatially explicit sampling design in 2012 and 2013, this study aims to evaluate the underlying processes of a soil mite metacommunity on a small spatial scale (50 m) in a temperate deciduous forest located at the Maoershan Ecosystem Research Station, Northeast China. Moran's eigenvector maps (MEMs) were used to model independent spatial variables. The relative importance of spatial (including trend variables, i.e., geographical coordinates, and broad- and fine-scale spatial variables) and environmental factors in driving the soil mite metacommunity was determined by variation partitioning. Mantel and partial Mantel tests and a redundancy analysis (RDA) were also used to identify the relative contributions of spatial and environmental variables. The results of variation partitioning suggested that the relatively large and significant variance was a result of spatial variables (including broad- and fine-scale spatial variables and trend), indicating the importance of dispersal limitation and autocorrelation processes. The significant contribution of environmental variables was detected in 2012 based on a partial Mantel test, and soil moisture and soil organic matter were especially important for the soil mite metacommunity composition in both years. The study suggested that the soil mite metacommunity was primarily regulated by dispersal limitation due to broad-scale and neutral biotic processes at a fine-scale and that environmental filtering might be of subordinate importance. In conclusion, a combination of metacommunity perspectives between neutral and species sorting theories was suggested to be important in the observed structure of the soil mite metacommunity at the studied small scale.

The underlying processes of a soil mite metacommunity on a small scale

PubMed Central

Guo, Chuanwei; Lin, Lin; Wu, Donghui; Zhang, Limin

2017-01-01

Metacommunity theory provides an understanding of how ecological processes regulate local community assemblies. However, few field studies have evaluated the underlying mechanisms of a metacommunity on a small scale through revealing the relative roles of spatial and environmental filtering in structuring local community composition. Based on a spatially explicit sampling design in 2012 and 2013, this study aims to evaluate the underlying processes of a soil mite metacommunity on a small spatial scale (50 m) in a temperate deciduous forest located at the Maoershan Ecosystem Research Station, Northeast China. Moran’s eigenvector maps (MEMs) were used to model independent spatial variables. The relative importance of spatial (including trend variables, i.e., geographical coordinates, and broad- and fine-scale spatial variables) and environmental factors in driving the soil mite metacommunity was determined by variation partitioning. Mantel and partial Mantel tests and a redundancy analysis (RDA) were also used to identify the relative contributions of spatial and environmental variables. The results of variation partitioning suggested that the relatively large and significant variance was a result of spatial variables (including broad- and fine-scale spatial variables and trend), indicating the importance of dispersal limitation and autocorrelation processes. The significant contribution of environmental variables was detected in 2012 based on a partial Mantel test, and soil moisture and soil organic matter were especially important for the soil mite metacommunity composition in both years. The study suggested that the soil mite metacommunity was primarily regulated by dispersal limitation due to broad-scale and neutral biotic processes at a fine-scale and that environmental filtering might be of subordinate importance. In conclusion, a combination of metacommunity perspectives between neutral and species sorting theories was suggested to be important in the observed structure of the soil mite metacommunity at the studied small scale. PMID:28481906

Climate Change, Soils, and Human Health

NASA Astrophysics Data System (ADS)

Brevik, Eric C.

2013-04-01

According to the Intergovernmental Panel on Climate Change, global temperatures are expected to increase 1.1 to 6.4 degrees C during the 21st century and precipitation patterns will be altered by climate change (IPCC, 2007). Soils are intricately linked to the atmospheric/climate system through the carbon, nitrogen, and hydrologic cycles. Altered climate will, therefore, have an effect on soil processes and properties. Studies into the effects of climate change on soil processes and properties are still incomplete, but have revealed that climate change will impact soil organic matter dynamics including soil organisms and the multiple soil properties that are tied to organic matter, soil water, and soil erosion. The exact direction and magnitude of those impacts will be dependent on the amount of change in atmospheric gases, temperature, and precipitation amounts and patterns. Recent studies give reason to believe at least some soils may become net sources of atmospheric carbon as temperatures rise; this is particularly true of high latitude regions with permanently frozen soils. Soil erosion by both wind and water is also likely to increase. These soil changes will lead to both direct and indirect impacts on human health. Possible indirect impacts include temperature extremes, food safety and air quality issues, increased and/or expanded disease incidences, and occupational health issues. Potential direct impacts include decreased food security and increased atmospheric dust levels. However, there are still many things we need to know more about. How climate change will affect the nitrogen cycle and, in turn, how the nitrogen cycle will affect carbon sequestration in soils is a major research need, as is a better understanding of soil water-CO2 level-temperature relationships. Knowledge of the response of plants to elevated atmospheric CO2 given limitations in nutrients like nitrogen and phosphorus and how that affects soil organic matter dynamics is a critical need. There is also a great need for a better understanding of how soil organisms will respond to climate change because those organisms are incredibly important in a number of soil processes, including the carbon and nitrogen cycles. All of these questions are important in trying to understand human health impacts. More information on climate change, soils, and human health issues can be found in Brevik (2012). References Brevik, E.C. 2012. Climate change, soils, and human health. In: E.C. Brevik and L. Burgess (Eds). Soils and human health. CRC Press, Boca Raton, FL. in press. IPCC. 2007. Summary for policymakers. pp. 1-18. In S. Solomon, D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M.Tignor and H.L. Miller (eds). Climate change 2007: the physical science basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change. Cambridge University Press, Cambridge, UK.

Microbial respiration and DOC composition in leachates from Holocene and Pleistocene soils from the Kolyma River basin in Eastern Siberia

NASA Astrophysics Data System (ADS)

Lewis, K.; Schade, J. D.; Sobczak, W. V.; Holmes, R. M.; Zimov, N.; Bulygina, E. B.; Chandra, S.; Bunn, A. G.; Russell-Roy, L.; Seybold, E. C.

2010-12-01

Permafrost is generally considered a long-term sink for carbon that remains locked away from the global carbon cycle. Anthropogenic climate change is likely to lead to thawing of permafrost and deepening of the soil active layer. Consequently, this carbon sink may become unlocked and available for bacterial decomposition, returning stored carbon to the active carbon cycle, with potentially severe consequences for atmospheric CO2 concentrations. The Kolyma watershed, in the Eastern Siberian Arctic, is underlain by continuous permafrost, often referred to as Yedoma, which provides a unique environment to study potential consequences of permafrost thaw for carbon dynamics in aquatic and terrestrial ecosystems. In order to predict the potential consequences of a major carbon input from thawing permafrost, we assessed the relative bioavailabilty of soil carbon by measuring rates of microbial consumption and changes in DOM composition in soil leachates. At two spatially distinct sample sites, soil was collected throughout the profile from the active layer and from permafrost, including soils from both Holocene and Pleistocene-era permafrost. To evaluate the rates of carbon processing and potential linkages to N and P cycles, we conducted a series of bottle experiments in which we measured biological oxygen demand as a proxy for carbon processing and assessed changes in the composition of dissolved organic carbon using spectral analyses. Experiments were conducted on leachate collected from each soil type. Each experiment included treatments in which leachates were enriched with nitrogen and phosphorus to determine whether carbon processing in soils was nutrient limited. We found substantial variation in oxygen consumption, with Yedoma soils generally exhibiting higher rates than Holocene soils, suggesting higher concentrations of labile carbon. We found no evidence of nutrient limitation of carbon processing in any soil leachates. Spectral slope analysis suggests that carbon processing increased the proportion of heavy aromatic carbon compounds in all but one soil type, suggesting that small molecular weight compounds are consumed first. The exception was the most active Yedoma soil, which showed the opposite effect, indicating an increase in the proportion of small molecules due to the presence of a different, and perhaps more digestible, form of carbon. These results suggest strong spatial variation in the amount and form of available carbon, as well as qualitative differences in the dynamics of carbon processing.

DEMONSTRATION BULLETIN: LOW TEMPERATURE THERMAL AERATION (LTTA®) SYSTEM - CANONIE ENVIRONMENTAL SERVICES, INC.

EPA Science Inventory

The Low Temperature Thermal Aeration (LTTA®) process was developed by Canonie Environmental Services, Inc. (Canonie), as a treatment system that desorbs organic contaminants from soils by heating the soils up to 800 °F. The main components of the LTTA process include the follow...

Climate response of the soil nitrogen cycle in three forest types of a headwater Mediterranean catchment

NASA Astrophysics Data System (ADS)

Lupon, Anna; Gerber, Stefan; Sabater, Francesc; Bernal, Susana

2015-05-01

Future changes in climate may affect soil nitrogen (N) transformations, and consequently, plant nutrition and N losses from terrestrial to stream ecosystems. We investigated the response of soil N cycling to changes in soil moisture, soil temperature, and precipitation across three Mediterranean forest types (evergreen oak, beech, and riparian) by fusing a simple process-based model (which included climate modifiers for key soil N processes) with measurements of soil organic N content, mineralization, nitrification, and concentration of ammonium and nitrate. The model describes sources (atmospheric deposition and net N mineralization) and sinks (plant uptake and hydrological losses) of inorganic N from and to the 0-10 cm soil pool as well as net nitrification. For the three forest types, the model successfully recreated the magnitude and temporal pattern of soil N processes and N concentrations (Nash-Sutcliffe coefficient = 0.49-0.96). Changes in soil water availability drove net N mineralization and net nitrification at the oak and beech forests, while temperature and precipitation were the strongest climatic factors for riparian soil N processes. In most cases, net N mineralization and net nitrification showed a different sensitivity to climatic drivers (temperature, soil moisture, and precipitation). Our model suggests that future climate change may have a minimal effect on the soil N cycle of these forests (<10% change in mean annual rates) because positive warming and negative drying effects on the soil N cycle may counterbalance each other.

Modeling aerosol suspension from soils and oceans as sources of micropollutants to air.

PubMed

Qureshi, Asif; MacLeod, Matthew; Hungerbühler, Konrad

2009-10-01

Soil and marine aerosol suspension are two physical mass transfer processes that are not usually included in models describing fate and transport of environmental pollutants. Here, we review the literature on soil and marine aerosol suspension and estimate aerosol suspension mass transfer velocities for inclusion in multimedia models, as a global average and on a 1 x 1 scale. The yearly, global average mass transfer velocity for soil aerosol suspension is estimated to be 6 x 10(-10)mh(-1), approximately an order of magnitude smaller than marine aerosol suspension, which is estimated to be 8 x 10(-9)mh(-1). Monthly averages of these velocities can be as high as 10(-7)mh(-1) and 10(-5)mh(-1) for soil and marine aerosol suspension, respectively, depending on location. We use a unit-world multimedia model to analyze the relevance of these two suspension processes as a mechanism that enhances long-range atmospheric transport of pollutants. This is done by monitoring a metric of long-range transport potential, phi-one thousand (phi1000), that denotes the fraction of modeled emissions to air, water or soil in a source region that reaches a distance of 1000 km in air. We find that when the yearly, globally averaged mass transfer velocity is used, marine aerosol suspension increases phi1000 only fractionally for both emissions to air and water. However, enrichment of substances in marine aerosols, or speciation between ionic and neutral forms in ocean water may increase the influence of this surface-to-air transfer process. Soil aerosol suspension can be the dominant process for soil-to-air transfer in an emission-to-soil scenario for certain substances that have a high affinity to soil. When a suspension mass transfer velocity near the maximum limit is used, soil suspension remains important if the emissions are made to soil, and marine aerosol suspension becomes important regardless of if emissions are made to air or water compartments. We recommend that multimedia models designed to assess the environmental fate and long-range transport behavior of substances with a range of chemical properties include both aerosol suspension processes, using the mass transfer velocities estimated here.

Deriving site-specific soil clean-up values for metals and metalloids: Rationale for including protection of soil microbial processes

PubMed Central

Kuperman, Roman G; Siciliano, Steven D; Römbke, Jörg; Oorts, Koen

2014-01-01

Although it is widely recognized that microorganisms are essential for sustaining soil fertility, structure, nutrient cycling, groundwater purification, and other soil functions, soil microbial toxicity data were excluded from the derivation of Ecological Soil Screening Levels (Eco-SSL) in the United States. Among the reasons for such exclusion were claims that microbial toxicity tests were too difficult to interpret because of the high variability of microbial responses, uncertainty regarding the relevance of the various endpoints, and functional redundancy. Since the release of the first draft of the Eco-SSL Guidance document by the US Environmental Protection Agency in 2003, soil microbial toxicity testing and its use in ecological risk assessments have substantially improved. A wide range of standardized and nonstandardized methods became available for testing chemical toxicity to microbial functions in soil. Regulatory frameworks in the European Union and Australia have successfully incorporated microbial toxicity data into the derivation of soil threshold concentrations for ecological risk assessments. This article provides the 3-part rationale for including soil microbial processes in the development of soil clean-up values (SCVs): 1) presenting a brief overview of relevant test methods for assessing microbial functions in soil, 2) examining data sets for Cu, Ni, Zn, and Mo that incorporated soil microbial toxicity data into regulatory frameworks, and 3) offering recommendations on how to integrate the best available science into the method development for deriving site-specific SCVs that account for bioavailability of metals and metalloids in soil. Although the primary focus of this article is on the development of the approach for deriving SCVs for metals and metalloids in the United States, the recommendations provided in this article may also be applicable in other jurisdictions that aim at developing ecological soil threshold values for protection of microbial processes in contaminated soils. PMID:24376192

Modeling soil processes - are we lost in diversity?

NASA Astrophysics Data System (ADS)

Vogel, Hans-Joerg; Schlüter, Steffen

2015-04-01

Soils are among the most complex environmental systems. Soil functions - e.g. production of biomass, habitat for organisms, reactor for and storage of organic matter, filter for ground water - emerge from a multitude of processes interacting at different scales. It still remains a challenge to model and predict these functions including their stability and resilience towards external perturbations. As an inherent property of complex systems it is prohibitive to unravel all the relevant process in all detail to derive soil functions and their dynamics from first principles. Hence, when modeling soil processes and their interactions one is close to be lost in the overwhelming diversity and spatial heterogeneity of soil properties. In this contribution we suggest to look for characteristic similarities within the hyperdimensional state space of soil properties. The underlying hypothesis is that this state space is not evenly and/or randomly populated but that processes of self organization produce attractors of physical, chemical and biological properties which can be identified. (The formation of characteristic soil horizons is an obvious example). To render such a concept operational a suitable and limited set of indicators is required. Ideally, such indicators are i) related to soil functions, ii) are measurable and iii) are integral measures of the relevant physical, chemical and biological soil properties. This would allow for identifying suitable attractors. We will discuss possible indicators and will focus on soil structure as an especially promising candidate. It governs the availability of water and gas, it effects the spatial distribution of organic matter and, moreover, it forms the habitat of soil organisms and it is formed by soil biota. Quantification of soil structural properties became possible only recently with the development of more powerful tools for non-invasive imaging. Future research need to demonstrate in how far these tools can be used to identify functional soil types (i.e. attractors) allowing for modeling soil processes at an integral level. We provide an example from the 100-years fertilization experiment in Bad-Lauchstädt.

Characterization of soil nematode communities in three cropping systems through morphological and DNA metabarcoding approaches

USDA-ARS?s Scientific Manuscript database

Communities of soil nematodes impact ecosystem functions, including plant growth, decomposition, and nutrient cycling, all of which are vital processes in agriculture. We used complementary morphological and DNA metabarcoding analyses to characterize soil nematode communities in three cropping syste...

Alkanes as Components of Soil Hydrocarbon Status: Behavior and Indication Significance

NASA Astrophysics Data System (ADS)

Gennadiev, A. N.; Zavgorodnyaya, Yu. A.; Pikovskii, Yu. I.; Smirnova, M. A.

2018-01-01

Studies of soils on three key plots with different climatic conditions and technogenic impacts in Volgograd, Moscow, and Arkhangelsk oblasts have showed that alkanes in the soil exchange complex have some indication potential for the identification of soil processes. The following combinations of soil-forming factors and processes have been studied: (a) self-purification of soil after oil pollution; (b) accumulation of hydrocarbons coming from the atmosphere to soils of different land use patterns; and (c) changes in the soil hydrocarbon complex beyond the zone of technogenic impact due to the input of free hydrocarbon-containing gases. At the injection input of hydrocarbon pollutants, changes in the composition and proportions of alkanes allow tracing the degradation trend of pollutants in the soil from their initial content to the final stage of soil self-purification, when the background concentrations of hydrocarbons are reached. Upon atmospheric deposition of hydrocarbons onto the soil, from the composition and mass distribution of alkanes, conclusions can be drawn about the effect of toxicants on biogeochemical processes in the soil, including their manifestation under different land uses. Composition analysis of soil alkanes in natural landscapes can reveal signs of hydrocarbon emanation fluxes in soils. The indication potentials of alkanes in combination with polycyclic aromatic hydrocarbons and other components of soil hydrocarbon complex can also be used for the solution of other soil-geochemical problems.

The hydrological cycle at European Fluxnet sites: modeling seasonal water and energy budgets at local scale.

NASA Astrophysics Data System (ADS)

Stockli, R.; Vidale, P. L.

2003-04-01

The importance of correctly including land surface processes in climate models has been increasingly recognized in the past years. Even on seasonal to interannual time scales land surface - atmosphere feedbacks can play a substantial role in determining the state of the near-surface climate. The availability of soil moisture for both runoff and evapotranspiration is dependent on biophysical processes occuring in plants and in the soil acting on a wide time-scale from minutes to years. Fluxnet site measurements in various climatic zones are used to drive three generations of LSM's (land surface models) in order to assess the level of complexity needed to represent vegetation processes at the local scale. The three models were the Bucket model (Manabe 1969), BATS 1E (Dickinson 1984) and SiB 2 (Sellers et al. 1996). Evapotranspiration and runoff processes simulated by these models range from simple one-layer soils and no-vegetation parameterizations to complex multilayer soils, including realistic photosynthesis-stomatal conductance models. The latter is driven by satellite remote sensing land surface parameters inheriting the spatiotemporal evolution of vegetation phenology. In addition a simulation with SiB 2 not only including vertical water fluxes but also lateral soil moisture transfers by downslope flow is conducted for a pre-alpine catchment in Switzerland. Preliminary results are presented and show that - depending on the climatic environment and on the season - a realistic representation of evapotranspiration processes including seasonally and interannually-varying state of vegetation is significantly improving the representation of observed latent and sensible heat fluxes on the local scale. Moreover, the interannual evolution of soil moisture availability and runoff is strongly dependent on the chosen model complexity. Biophysical land surface parameters from satellite allow to represent the seasonal changes in vegetation activity, which has great impact on the yearly budget of transpiration fluxes. For some sites, however, the hydrological cycle is simulated reasonably well even with simple land surface representations.

Photodegradation processes in arid ecosystems: controlling factors and potential application in land restoration

NASA Astrophysics Data System (ADS)

Muñoz-Rojas, Miriam; Luna-Ramos, Lourdes; Oyonarte, Cecilio; Sole Benet, Albert

2017-04-01

Water availability plays a fundamental part in controlling biotic processes in arid ecosystems. However, recent evidence suggests that other decisive drivers take part in these processes. Despite low annual rainfall and microbial activity, unexplained high rates of litter decomposition, net nitrogen mineralization, soil enzymatic activity and carbon turnover have been observed in arid ecosystems. These observations have been partly explained by photodegradation, a process that consists of the breakdown of organic matter via solar radiation (UV) and that can increase decomposition rates and lead to changes in the balance of carbon and nutrients between plants, soil and atmosphere. A complete understanding of these mechanisms and its drivers in arid ecosystems remains a critical challenge for the scientific community at the global level. In this research, we conducted a multi-site field experiment to test the effects of photodegradation on decomposition of organic amendments used in ecosystem restoration. The study was carried out during 12 months in two study areas: the Pilbara region in Western Australia (Southern Hemisphere) and the Cabo de Gata Nijar Natural Park, South Spain (Northern Hemisphere). In both sites, four treatments were applied in replicated plots (1x1 m, n=4) that included a control (C) with no soil amendment; organic amendment covering the soil surface (AS); organic amendment incorporated into the soil (AI); and a combination of both techniques, both covering the surface and incorporated into the soil (AS-AI). Different organic amendments (native mulch versus compost) and soil substrates were used at each site according to local practices, but in both sites these were applied to increase soil organic matter up to 2%. At the two locations, a radiometer and a logger with a soil temperature and soil moisture probe were installed to monitor UV radiation and soil conditions for the duration of the trial. Soil microbial activity, soil CO2 efflux, and the organic matter fractions (including total OC and hydro-soluble C) were measured repeatedly during the experiment. At the end of the experiment, levels of the soluble fraction of C, soil CO2 efflux and soil microbial activity were significantly (p< 0.05) higher in those plots amended in the surface in both sites. These increases in the surface reflect a fast C decomposing process that can be directly related to UV radiation, evidencing the critical role of photodegradation on the decomposition of the organic matter. These processes can be critical at global scales as they can contribute to forcing biogechemical cycles; however, responses will vary depending on the type of the substrate and organic amendment.

Burrowing herbivores alter soil carbon and nitrogen dynamics in a semi-arid ecosystem, Argentina

Treesearch

Kenneth L. Clark; Lyn C. Branch; Jose L. Hierro; Diego Villarreal

2016-01-01

Activities of burrowing herbivores, including movement of soil and litter and deposition of waste material, can alter the distribution of labile carbon (C) and nitrogen (N) in soil, affecting spatial patterning of nutrient dynamics in ecosystems where they are abundant. Their role in ecosystem processes in surface soil has been studied extensively, but effects of...

Assessment of tomato and wine processing solid wastes as soil amendments for biosolarization.

PubMed

Achmon, Yigal; Harrold, Duff R; Claypool, Joshua T; Stapleton, James J; VanderGheynst, Jean S; Simmons, Christopher W

2016-02-01

Pomaces from tomato paste and wine production are the most abundant fruit processing residues in California. These residues were examined as soil amendments for solarization to promote conditions conducive to soil disinfestation (biosolarization). Simulated biosolarization studies were performed in both aerobic and anaerobic soil environments and soil temperature elevation, pH, and evolution of CO2, H2 and CH4 gases were measured as metrics of soil microbial activity. Tomato pomace amendment induced conditions associated with soil pest inactivation, including elevation of soil temperature by up to 2°C for a duration of 4days under aerobic conditions and a reduction of soil pH from 6.5 to 4.68 under anaerobic conditions. White wine grape pomace amendment showed similar trends but to a lesser extent. Red wine grape pomace was generally less suitable for biosolarization due to significantly lower soil temperature elevations, reduced acidification relative to the other pomaces and induction of methanogenesis in the soil. Copyright © 2015 Elsevier Ltd. All rights reserved.

Carbon stocks and fluxes in the high latitudes: using site-level data to evaluate Earth system models

NASA Astrophysics Data System (ADS)

Chadburn, Sarah E.; Krinner, Gerhard; Porada, Philipp; Bartsch, Annett; Beer, Christian; Belelli Marchesini, Luca; Boike, Julia; Ekici, Altug; Elberling, Bo; Friborg, Thomas; Hugelius, Gustaf; Johansson, Margareta; Kuhry, Peter; Kutzbach, Lars; Langer, Moritz; Lund, Magnus; Parmentier, Frans-Jan W.; Peng, Shushi; Van Huissteden, Ko; Wang, Tao; Westermann, Sebastian; Zhu, Dan; Burke, Eleanor J.

2017-11-01

It is important that climate models can accurately simulate the terrestrial carbon cycle in the Arctic due to the large and potentially labile carbon stocks found in permafrost-affected environments, which can lead to a positive climate feedback, along with the possibility of future carbon sinks from northward expansion of vegetation under climate warming. Here we evaluate the simulation of tundra carbon stocks and fluxes in three land surface schemes that each form part of major Earth system models (JSBACH, Germany; JULES, UK; ORCHIDEE, France). We use a site-level approach in which comprehensive, high-frequency datasets allow us to disentangle the importance of different processes. The models have improved physical permafrost processes and there is a reasonable correspondence between the simulated and measured physical variables, including soil temperature, soil moisture and snow. We show that if the models simulate the correct leaf area index (LAI), the standard C3 photosynthesis schemes produce the correct order of magnitude of carbon fluxes. Therefore, simulating the correct LAI is one of the first priorities. LAI depends quite strongly on climatic variables alone, as we see by the fact that the dynamic vegetation model can simulate most of the differences in LAI between sites, based almost entirely on climate inputs. However, we also identify an influence from nutrient limitation as the LAI becomes too large at some of the more nutrient-limited sites. We conclude that including moss as well as vascular plants is of primary importance to the carbon budget, as moss contributes a large fraction to the seasonal CO2 flux in nutrient-limited conditions. Moss photosynthetic activity can be strongly influenced by the moisture content of moss, and the carbon uptake can be significantly different from vascular plants with a similar LAI. The soil carbon stocks depend strongly on the rate of input of carbon from the vegetation to the soil, and our analysis suggests that an improved simulation of photosynthesis would also lead to an improved simulation of soil carbon stocks. However, the stocks are also influenced by soil carbon burial (e.g. through cryoturbation) and the rate of heterotrophic respiration, which depends on the soil physical state. More detailed below-ground measurements are needed to fully evaluate biological and physical soil processes. Furthermore, even if these processes are well modelled, the soil carbon profiles cannot resemble peat layers as peat accumulation processes are not represented in the models. Thus, we identify three priority areas for model development: (1) dynamic vegetation including (a) climate and (b) nutrient limitation effects; (2) adding moss as a plant functional type; and an (3) improved vertical profile of soil carbon including peat processes.

[Soil hydrolase characteristics in late soil-thawing period in subalpine/alpine forests of west Sichuan].

PubMed

Tan, Bo; Wu, Fu-Zhong; Yang, Wan-Qin; Yu, Sheng; Yang, Yu-Lian; Wang, Ao

2011-05-01

Late soil-thawing period is a critical stage connecting winter and growth season. The significant temperature fluctuation at this stage might have strong effects on soil ecological processes. In order to understand the soil biochemical processes at this stage in the subalpine/alpine forests of west Sichuan, soil samples were collected from the representative forests including primary fir forest, fir and birch mixed forest, and secondary fir forest in March 5-April 25, 2009, with the activities of soil invertase, urease, and phosphatase (neutral, acid and alkaline phosphatases) measured. In soil frozen period, the activities of the three enzymes in test forests still kept relatively higher. With the increase of soil temperature, the activities of hydrolases at the early stage of soil-thawing decreased rapidly after a sharp increase, except for neutral phosphatease. Thereafter, there was an increase in the activities of urease and phosphatase. Relative to soil mineral layer, soil organic layer had higher hydrolase activity in late soil-thawing period, and showed more obvious responses to the variation of soil temperature.

An advanced process-based distributed model for the investigation of rainfall-induced landslides: The effect of process representation and boundary conditions

NASA Astrophysics Data System (ADS)

Anagnostopoulos, Grigorios G.; Fatichi, Simone; Burlando, Paolo

2015-09-01

Extreme rainfall events are the major driver of shallow landslide occurrences in mountainous and steep terrain regions around the world. Subsurface hydrology has a dominant role on the initiation of rainfall-induced shallow landslides, since changes in the soil water content affect significantly the soil shear strength. Rainfall infiltration produces an increase of soil water potential, which is followed by a rapid drop in apparent cohesion. Especially on steep slopes of shallow soils, this loss of shear strength can lead to failure even in unsaturated conditions before positive water pressures are developed. We present HYDROlisthisis, a process-based model, fully distributed in space with fine time resolution, in order to investigate the interactions between surface and subsurface hydrology and shallow landslides initiation. Fundamental elements of the approach are the dependence of shear strength on the three-dimensional (3-D) field of soil water potential, as well as the temporal evolution of soil water potential during the wetting and drying phases. Specifically, 3-D variably saturated flow conditions, including soil hydraulic hysteresis and preferential flow phenomena, are simulated for the subsurface flow, coupled with a surface runoff routine based on the kinematic wave approximation. The geotechnical component of the model is based on a multidimensional limit equilibrium analysis, which takes into account the basic principles of unsaturated soil mechanics. A series of numerical simulations were carried out with various boundary conditions and using different hydrological and geotechnical components. Boundary conditions in terms of distributed soil depth were generated using both empirical and process-based models. The effect of including preferential flow and soil hydraulic hysteresis was tested together with the replacement of the infinite slope assumption with the multidimensional limit equilibrium analysis. The results show that boundary conditions play a crucial role in the model performance and that the introduced hydrological (preferential flow and soil hydraulic hysteresis) and geotechnical components (multidimensional limit equilibrium analysis) significantly improve predictive capabilities in the presented case study.

Mind the gap: non-biological processes contributing to soil CO2 efflux.

PubMed

Rey, Ana

2015-05-01

Widespread recognition of the importance of soil CO2 efflux as a major source of CO2 to the atmosphere has led to active research. A large soil respiration database and recent reviews have compiled data, methods, and current challenges. This study highlights some deficiencies for a proper understanding of soil CO2 efflux focusing on processes of soil CO2 production and transport that have not received enough attention in the current soil respiration literature. It has mostly been assumed that soil CO2 efflux is the result of biological processes (i.e. soil respiration), but recent studies demonstrate that pedochemical and geological processes, such as geothermal and volcanic CO2 degassing, are potentially important in some areas. Besides the microbial decomposition of litter, solar radiation is responsible for photodegradation or photochemical degradation of litter. Diffusion is considered to be the main mechanism of CO2 transport in the soil, but changes in atmospheric pressure and thermal convection may also be important mechanisms driving soil CO2 efflux greater than diffusion under certain conditions. Lateral fluxes of carbon as dissolved organic and inorganic carbon occur and may cause an underestimation of soil CO2 efflux. Traditionally soil CO2 efflux has been measured with accumulation chambers assuming that the main transport mechanism is diffusion. New techniques are available such as improved automated chambers, CO2 concentration profiles and isotopic techniques that may help to elucidate the sources of carbon from soils. We need to develop specific and standardized methods for different CO2 sources to quantify this flux on a global scale. Biogeochemical models should include biological and non-biological CO2 production processes before we can predict the response of soil CO2 efflux to climate change. Improving our understanding of the processes involved in soil CO2 efflux should be a research priority given the importance of this flux in the global carbon budget. © 2014 John Wiley & Sons Ltd.

Chapter 3: Soil Chemistry

Treesearch

Jennifer D. Knoepp; Leonard F. DeBano; Daniel G. Neary

2005-01-01

The chemical properties of the soil that are affected by fire include individual chemical characteristics, chemical reactions, and chemical processes (DeBano and others 1998). The soil chemical characteristics most commonly affected by fire are organic matter, carbon (C), nitrogen (N), phosphorus (P), sulfur (S), cations, cation exchange capacity, pH, and buffer power...

Soil process-oriented modelling of within-field variability based on high-resolution 3D soil type distribution maps.

NASA Astrophysics Data System (ADS)

Bönecke, Eric; Lück, Erika; Gründling, Ralf; Rühlmann, Jörg; Franko, Uwe

2016-04-01

Today, the knowledge of within-field variability is essential for numerous purposes, including practical issues, such as precision and sustainable soil management. Therefore, process-oriented soil models have been applied for a considerable time to answer question of spatial soil nutrient and water dynamics, although, they can only be as consistent as their variation and resolution of soil input data. Traditional approaches, describe distribution of soil types, soil texture or other soil properties for greater soil units through generalised point information, e.g. from classical soil survey maps. Those simplifications are known to be afflicted with large uncertainties. Varying soil, crop or yield conditions are detected even within such homogenised soil units. However, recent advances of non-invasive soil survey and on-the-go monitoring techniques, made it possible to obtain vertical and horizontal dense information (3D) about various soil properties, particularly soil texture distribution which serves as an essential soil key variable affecting various other soil properties. Thus, in this study we based our simulations on detailed 3D soil type distribution (STD) maps (4x4 m) to adjacently built-up sufficient informative soil profiles including various soil physical and chemical properties. Our estimates of spatial STD are based on high-resolution lateral and vertical changes of electrical resistivity (ER), detected by a relatively new multi-sensor on-the-go ER monitoring device. We performed an algorithm including fuzzy-c-mean (FCM) logic and traditional soil classification to estimate STD from those inverted and layer-wise available ER data. STD is then used as key input parameter for our carbon, nitrogen and water transport model. We identified Pedological horizon depths and inferred hydrological soil variables (field capacity, permanent wilting point) from pedotransferfunctions (PTF) for each horizon. Furthermore, the spatial distribution of soil organic carbon (SOC), as essential input variable, was predicted by measured soil samples and associated to STD of the upper 30 cm. The comprehensive and high-resolution (4x4 m) soil profile information (up to 2 m soil depth) were then used to initialise a soil process model (Carbon and Nitrogen Dynamics - CANDY) for soil functional modelling (daily steps of matter fluxes, soil temperature and water balances). Our study was conducted on a practical field (~32,000 m²) of an agricultural farm in Central Germany with Chernozem soils under arid conditions (average rainfall < 550 mm). This soil region is known to have differences in soil structure mainly occurring within the subsoil, since topsoil conditions are described as homogenous. The modelled soil functions considered local climate information and practical farming activities. Results show, as expected, distinguished functional variability, both on spatial and temporal resolution for subsoil evident structures, e.g. visible differences for available water capacity within 0-100 cm but homogenous conditions for the topsoil.

Johnston Atoll Plutonium Contaminated Soil Cleanup Project. 5th quarterly report, 1 August 94 to 31 October 1994. Technical report, 1 August-31 October 1994

DOE Office of Scientific and Technical Information (OSTI.GOV)

Doane, R.W.; Grant, R.H.

1996-09-01

Thermo NUtech is the prime contractor for the Defense Nuclear Agency (DNA), responsible for the operation and maintenance of the Johnston Atoll plutonium Contaminated Soil Cleanup Project. During this production period, the Scope of Work included movement of soil to and from the plant, processing contaminated soil through the Segmented Gate System (SGS) and Soil Washing System, packaging of waste soil for shipment, identification and implementation of process improvements, data collection and validation, and compliance with all applicable regulations governing environmental safety and health. The SGS utilizes arrays of sensitive radiation detectors coupled with sophisticated computer software to segregate contaminatedmore » soil from a moving feed supply on conveyor belts. Contaminated soil is diverted to a `hot path` for plutonium particles greater than 5000 Becquerels or to a supplemental soil washing process designed to remove dispersed low leve%l contamination from a soil faction consisting of very small particles. Low to intermediate levels of contamination are removed from the soil to meet DNA`s criteria for unrestricted use of less than 500 Becquerels per kilogram of soil, with no hot particles. The low level concentrate is expected to be packaged for shipment to an approved defense waste disposal site.« less

Biochar effects on gaseous losses of N2O and CH4

USDA-ARS?s Scientific Manuscript database

The flux of N2O from soil is controlled by both biological and abiotic processes resulting in production and consumption. In a recent review by Butterbach-Bahl et al., (2013), key processes that contribute to N2O formation in soils included: 1) chemical decomposition of hydroxylamine during autotrop...

A first attempt to reproduce basaltic soil chronosequences using a process-based soil profile model: implications for our understanding of soil evolution

NASA Astrophysics Data System (ADS)

Johnson, M.; Gloor, M.; Lloyd, J.

2012-04-01

Soils are complex systems which hold a wealth of information on both current and past conditions and many biogeochemical processes. The ability to model soil forming processes and predict soil properties will enable us to quantify such conditions and contribute to our understanding of long-term biogeochemical cycles, particularly the carbon cycle and plant nutrient cycles. However, attempts to confront such soil model predictions with data are rare, although increasingly more data from chronosquence studies is becoming available for such a purpose. Here we present initial results of an attempt to reproduce soil properties with a process-based soil evolution model similar to the model of Kirkby (1985, J. Soil Science). We specifically focus on the basaltic soils in both Hawaii and north Queensland, Australia. These soils are formed on a series of volcanic lava flows which provide sequences of different aged soils all with a relatively uniform parent material. These soil chronosequences provide a snapshot of a soil profile during different stages of development. Steep rainfall gradients in these regions also provide a system which allows us to test the model's ability to reproduce soil properties under differing climates. The mechanistic, soil evolution model presented here includes the major processes of soil formation such as i) mineral weathering, ii) percolation of rainfall through the soil, iii) leaching of solutes out of the soil profile iv) surface erosion and v) vegetation and biotic interactions. The model consists of a vertical profile and assumes simple geometry with a constantly sloping surface. The timescales of interest are on the order of tens to hundreds of thousand years. The specific properties the model predicts are, soil depth, the proportion of original elemental oxides remaining in each soil layer, pH of the soil solution, organic carbon distribution and CO2 production and concentration. The presentation will focus on a brief introduction of the model, followed by a description of novel methods using tracers such as optically stimulated luminescence (OSL) dates and meteoric 10Be to evaluate the modelled processes of bioturbation and surface erosion. We will also discuss comparisons of modelled properties with observations and conclude with implications on our understanding of soil evolution.

Bioremediation of petroleum-contaminated soil: A Review

NASA Astrophysics Data System (ADS)

Yuniati, M. D.

2018-02-01

Petroleum is the major source of energy for various industries and daily life. Releasing petroleum into the environment whether accidentally or due to human activities is a main cause of soil pollution. Soil contaminated with petroleum has a serious hazard to human health and causes environmental problems as well. Petroleum pollutants, mainly hydrocarbon, are classified as priority pollutants. The application of microorganisms or microbial processes to remove or degrade contaminants from soil is called bioremediation. This microbiological decontamination is claimed to be an efficient, economic and versatile alternative to physicochemical treatment. This article presents an overview about bioremediation of petroleum-contaminated soil. It also includes an explanation about the types of bioremediation technologies as well as the processes.

The sequential use of washing and an electrochemical reduction process for the remediation of lead-contaminated soils.

PubMed

Demir, Aydeniz; Köleli, Nurcan

2013-01-01

A two-step method for the remediation of three different types of lead (Pb)-contaminated soil was evaluated. The first step included soil washing with ethylenediaminetetraacetic acid (EDTA) to remove Pb from soils. The washing experiments were performed with 0.05 M Na2EDTA at 1:10 soil to liquid ratio. Following the washing, Pb removal efficiency from soils ranged within 50-70%. After the soil washing process, Pb2+ ions in the washing solution were reduced electrochemically in a fixed-bed reactor. Lead removal efficiency with the electrochemical reduction at -2.0 V potential ranged within 57-76%. The overall results indicate that this two-step method is an environmentally-friendly and effective technology to remediate Pb-contaminated soils, as well as Pb-contaminated wastewater treatment due to the transformation of toxic Pb2+ ions into a non-hazardous metallic form (Pb(0)).

Combining phytoextraction and biochar addition improves soil biochemical properties in a soil contaminated with Cd.

PubMed

Lu, Huanping; Li, Zhian; Fu, Shenglei; Méndez, Ana; Gascó, Gabriel; Paz-Ferreiro, Jorge

2015-01-01

The main goal of phytoremediation is to improve ecosystem functioning. Soil biochemical properties are considered as effective indicators of soil quality and are sensitive to various environmental stresses, including heavy metal contamination. The biochemical response in a soil contaminated with cadmium was tested after several treatments aimed to reduce heavy metal availability including liming, biochar addition and phytoextraction using Amaranthus tricolor L. Two biochars were added to the soil: eucalyptus pyrolysed at 600 °C (EB) and poultry litter at 400 °C (PLB). Two liming treatments were chosen with the aim of bringing soil pH to the same values as in the treatments EB and PLB. The properties studied included soil microbial biomass C, soil respiration and the activities of invertase, β-glucosidase, β-glucosaminidase, urease and phosphomonoesterase. Both phytoremediation and biochar addition improved soil biochemical properties, although results were enzyme specific. For biochar addition these changes were partly, but not exclusively, mediated by alterations in soil pH. A careful choice of biochar must be undertaken to optimize the remediation process from the point of view of metal phytoextraction and soil biological activity. Copyright © 2014 Elsevier Ltd. All rights reserved.

A new method to measure effective soil solution concentration predicts copper availability to plants.

PubMed

Zhang, H; Zhao, F J; Sun, B; Davison, W; McGrath, S P

2001-06-15

Risk assessments of metal contaminated soils need to address metal bioavailability. To predict the bioavailability of metals to plants, it is necessary to understand both solution and solid phase supply processes in soils. In striving to find surrogate chemical measurements, scientists have focused either on soil solution chemistry, including free ion activities, or operationally defined fractions of metals. Here we introduce the new concept of effective concentration, CE, which includes both the soil solution concentration and an additional term, expressed as a concentration, that represents metal supplied from the solid phase. CE was measured using the technique of diffusive gradients in thin films (DGT) which, like a plant, locally lowers soil solution concentrations, inducing metal supply from the solid phase, as shown by a dynamic model of the DGT-soil system. Measurements of Cu as CE, soil solution concentration, by EDTA extraction and as free Cu2+ activity in soil solution were made on 29 different soils covering a large range of copper concentrations. Theywere compared to Cu concentrations in the plant material of Lepidium heterophyllum grown on the same soils. Plant concentrations were linearly related and highly correlated with CE but were more scattered and nonlinear with respect to free Cu2+ activity, EDTA extraction, or soil solution concentrations. These results demonstrate that the dominant supply processes in these soils are diffusion and labile metal release, which the DGT-soil system mimics. The quantity CE is shown to have promise as a quantitative measure of the bioavailable metal in soils.

Aldehyde dehydrogenase expression in Metaphire posthuma as a bioindicator to monitor heavy metal pollution in soil.

PubMed

Panday, Raju; Bhatt, Padam Shekhar; Bhattarai, Tribikram; Shakya, Kumudini; Sreerama, Lakshmaiah

2016-11-21

Soil contamination and associated pollution plays a detrimental role in soil flora and fauna. Soil is processed and remodeled by subterranean earthworms, accordingly are referred to as soil chemical engineers. These worms, besides processing carbon and nitrogen, serve as minors for processing metals. In heavy metal contaminated soils, they accumulate heavy metals, which in turn cause altered gene expression, including aldehyde dehydrogenase (ALDH) enzymes. This study explores the possibility of ALDH expression in earthworms as a novel biomarker for the heavy metal contamination of soil. Earthworms cultured in contaminated soils accumulated significantly higher levels of Pb and Cd. Similarly, significantly higher levels of ALDH enzyme activities were observed in earthworms cultured in soils contaminated with Pb and Cd. The ALDH activity was found to be highest in worms cultured in 5 ppm heavy metal contaminated soils. Although, ALDH activities decreased as the heavy metal concentration in soil increased, they were significantly higher when compared to control worms cultured in uncontaminated soils. The accumulation of heavy metal in earthworms measured after 28 days decreased as the heavy metal concentration in soil increased. Levels of ALDH expression correlated with total Pb and Cd concentration in the earthworm tissue. This study showed that the ALDH activity in earthworms could potentially be used as a biomarker to show heavy metal pollution in soil.

Quantifying the Global Nitrous Oxide Emissions Using a Trait-based Biogeochemistry Model

NASA Astrophysics Data System (ADS)

Zhuang, Q.; Yu, T.

2017-12-01

Nitrogen is an essential element for the global biogeochemical cycle. It is a key nutrient for organisms and N compounds including nitrous oxide significantly influence the global climate. The activities of bacteria and archaea are responsible for the nitrification and denitrification in a wide variety of environments, so microbes play an important role in the nitrogen cycle in soils. To date, most existing process-based models treated nitrification and denitrification as chemical reactions driven by soil physical variables including soil temperature and moisture. In general, the effect of microbes on N cycling has not been modeled in sufficient details. Soil organic carbon also affects the N cycle because it supplies energy to microbes. In my study, a trait-based biogeochemistry model quantifying N2O emissions from the terrestrial ecosystems is developed based on an extant process-based model TEM (Terrestrial Ecosystem Model). Specifically, the improvement to TEM includes: 1) Incorporating the N fixation process to account for the inflow of N from the atmosphere to biosphere; 2) Implementing the effects of microbial dynamics on nitrification process; 3) fully considering the effects of carbon cycling on N nitrogen cycling following the principles of stoichiometry of carbon and nitrogen in soils, plants, and microbes. The difference between simulations with and without the consideration of bacterial activity lies between 5% 25% based on climate conditions and vegetation types. The trait based module allows a more detailed estimation of global N2O emissions.

Soil nitrate reducing processes – drivers, mechanisms for spatial variation, and significance for nitrous oxide production

PubMed Central

Giles, Madeline; Morley, Nicholas; Baggs, Elizabeth M.; Daniell, Tim J.

2012-01-01

The microbial processes of denitrification and dissimilatory nitrate reduction to ammonium (DNRA) are two important nitrate reducing mechanisms in soil, which are responsible for the loss of nitrate (NO3−) and production of the potent greenhouse gas, nitrous oxide (N2O). A number of factors are known to control these processes, including O2 concentrations and moisture content, N, C, pH, and the size and community structure of nitrate reducing organisms responsible for the processes. There is an increasing understanding associated with many of these controls on flux through the nitrogen cycle in soil systems. However, there remains uncertainty about how the nitrate reducing communities are linked to environmental variables and the flux of products from these processes. The high spatial variability of environmental controls and microbial communities across small sub centimeter areas of soil may prove to be critical in determining why an understanding of the links between biotic and abiotic controls has proved elusive. This spatial effect is often overlooked as a driver of nitrate reducing processes. An increased knowledge of the effects of spatial heterogeneity in soil on nitrate reduction processes will be fundamental in understanding the drivers, location, and potential for N2O production from soils. PMID:23264770

Soil nitrate reducing processes - drivers, mechanisms for spatial variation, and significance for nitrous oxide production.

PubMed

Giles, Madeline; Morley, Nicholas; Baggs, Elizabeth M; Daniell, Tim J

2012-01-01

The microbial processes of denitrification and dissimilatory nitrate reduction to ammonium (DNRA) are two important nitrate reducing mechanisms in soil, which are responsible for the loss of nitrate ([Formula: see text]) and production of the potent greenhouse gas, nitrous oxide (N(2)O). A number of factors are known to control these processes, including O(2) concentrations and moisture content, N, C, pH, and the size and community structure of nitrate reducing organisms responsible for the processes. There is an increasing understanding associated with many of these controls on flux through the nitrogen cycle in soil systems. However, there remains uncertainty about how the nitrate reducing communities are linked to environmental variables and the flux of products from these processes. The high spatial variability of environmental controls and microbial communities across small sub centimeter areas of soil may prove to be critical in determining why an understanding of the links between biotic and abiotic controls has proved elusive. This spatial effect is often overlooked as a driver of nitrate reducing processes. An increased knowledge of the effects of spatial heterogeneity in soil on nitrate reduction processes will be fundamental in understanding the drivers, location, and potential for N(2)O production from soils.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Meier, J.R.; Chang, L.W.; Meckes, M.C.

Soil from a site heavily contaminated with polychlorinated biphenyls (PCBs) was treated with a pilot-scale, solvent extraction technology. Bioassays in earthworms and plants were used to examine the efficacy of the remediation process for reducing the toxicity of the soil. The earthworm toxicity bioassays were the 14-d survival test and 21-d reproduction test, using Lumbricus terrestris and Eisenia fetida andrei. The plant bioassays included phytotoxicity tests for seed germination and root elongation in lettuce and oats, and a genotoxicity test (anaphase aberrations) in Allium cepa (common onion). Although the PCB content of the soil was reduced by 99% (below themore » remediation goal), toxicity to earthworm reproduction remained essentially unchanged following remediation. Furthermore, phytotoxicity and genotoxicity were higher for the remediated soil compared to the untreated soil. The toxicity remaining after treatment appeared to be due to residual solvent introduced during the remediation process, and/or to heavy metals or other inorganic contaminants not removed by the treatment. Mixture studies involving isopropanol and known toxicants indicated possible synergistic effects of the extraction solvent and soil contaminants. The toxicity in plants was essentially eliminated by a postremediation, water-rinsing step. These results demonstrate a need for including toxicity measurements in the evaluation of technologies used in hazardous waste site remediations, and illustrate the potential value of such measurements for making modifications to remediation processes.« less

Forest Soil Bacteria: Diversity, Involvement in Ecosystem Processes, and Response to Global Change

PubMed Central

Lladó, Salvador; López-Mondéjar, Rubén

2017-01-01

SUMMARY The ecology of forest soils is an important field of research due to the role of forests as carbon sinks. Consequently, a significant amount of information has been accumulated concerning their ecology, especially for temperate and boreal forests. Although most studies have focused on fungi, forest soil bacteria also play important roles in this environment. In forest soils, bacteria inhabit multiple habitats with specific properties, including bulk soil, rhizosphere, litter, and deadwood habitats, where their communities are shaped by nutrient availability and biotic interactions. Bacteria contribute to a range of essential soil processes involved in the cycling of carbon, nitrogen, and phosphorus. They take part in the decomposition of dead plant biomass and are highly important for the decomposition of dead fungal mycelia. In rhizospheres of forest trees, bacteria interact with plant roots and mycorrhizal fungi as commensalists or mycorrhiza helpers. Bacteria also mediate multiple critical steps in the nitrogen cycle, including N fixation. Bacterial communities in forest soils respond to the effects of global change, such as climate warming, increased levels of carbon dioxide, or anthropogenic nitrogen deposition. This response, however, often reflects the specificities of each studied forest ecosystem, and it is still impossible to fully incorporate bacteria into predictive models. The understanding of bacterial ecology in forest soils has advanced dramatically in recent years, but it is still incomplete. The exact extent of the contribution of bacteria to forest ecosystem processes will be recognized only in the future, when the activities of all soil community members are studied simultaneously. PMID:28404790

Forest Soil Bacteria: Diversity, Involvement in Ecosystem Processes, and Response to Global Change.

PubMed

Lladó, Salvador; López-Mondéjar, Rubén; Baldrian, Petr

2017-06-01

The ecology of forest soils is an important field of research due to the role of forests as carbon sinks. Consequently, a significant amount of information has been accumulated concerning their ecology, especially for temperate and boreal forests. Although most studies have focused on fungi, forest soil bacteria also play important roles in this environment. In forest soils, bacteria inhabit multiple habitats with specific properties, including bulk soil, rhizosphere, litter, and deadwood habitats, where their communities are shaped by nutrient availability and biotic interactions. Bacteria contribute to a range of essential soil processes involved in the cycling of carbon, nitrogen, and phosphorus. They take part in the decomposition of dead plant biomass and are highly important for the decomposition of dead fungal mycelia. In rhizospheres of forest trees, bacteria interact with plant roots and mycorrhizal fungi as commensalists or mycorrhiza helpers. Bacteria also mediate multiple critical steps in the nitrogen cycle, including N fixation. Bacterial communities in forest soils respond to the effects of global change, such as climate warming, increased levels of carbon dioxide, or anthropogenic nitrogen deposition. This response, however, often reflects the specificities of each studied forest ecosystem, and it is still impossible to fully incorporate bacteria into predictive models. The understanding of bacterial ecology in forest soils has advanced dramatically in recent years, but it is still incomplete. The exact extent of the contribution of bacteria to forest ecosystem processes will be recognized only in the future, when the activities of all soil community members are studied simultaneously. Copyright © 2017 American Society for Microbiology.

Fire-induced water repellency: An erosional factor in wildland environments

Treesearch

Leonard F. DeBano

2000-01-01

Watershed managers and scientists throughout the world have been aware of fire-induced water-repellent soils for over three decades. Water repellency affects many hydrologic processes, including infiltration, overland flow, and surface erosion (rill and sheet erosion). This paper describes; the formation of fire-induced water-repellent soils, the effect of soil water...

Responses of redwood soil microbial community structure and N transformations to climate change

Treesearch

Damon C. Bradbury; Mary K. Firestone

2012-01-01

Soil microorganisms perform critical ecosystem functions, including decomposition, nitrogen (N) mineralization and nitrification. Soil temperature and water availability can be critical determinants of the rates of these processes as well as microbial community composition and structure. This research examined how changes in climate affect bacterial and fungal...

Three phase heat and mass transfer model for unsaturated soil freezing process: Part 1 - model development

NASA Astrophysics Data System (ADS)

Xu, Fei; Zhang, Yaning; Jin, Guangri; Li, Bingxi; Kim, Yong-Song; Xie, Gongnan; Fu, Zhongbin

2018-04-01

A three-phase model capable of predicting the heat transfer and moisture migration for soil freezing process was developed based on the Shen-Chen model and the mechanisms of heat and mass transfer in unsaturated soil freezing. The pre-melted film was taken into consideration, and the relationship between film thickness and soil temperature was used to calculate the liquid water fraction in both frozen zone and freezing fringe. The force that causes the moisture migration was calculated by the sum of several interactive forces and the suction in the pre-melted film was regarded as an interactive force between ice and water. Two kinds of resistance were regarded as a kind of body force related to the water films between the ice grains and soil grains, and a block force instead of gravity was introduced to keep balance with gravity before soil freezing. Lattice Boltzmann method was used in the simulation, and the input variables for the simulation included the size of computational domain, obstacle fraction, liquid water fraction, air fraction and soil porosity. The model is capable of predicting the water content distribution along soil depth and variations in water content and temperature during soil freezing process.

When and where does preferential flow matter - from observation to large scale modelling

NASA Astrophysics Data System (ADS)

Weiler, Markus; Leistert, Hannes; Steinbrich, Andreas

2017-04-01

Preferential flow can be of relevance in a wide range of soils and the interaction of different processes and factors are still difficult to assess. As most studies (including our own studies) focusing on the effect of preferential flow are based on relatively high precipitation rates, there is always the question how relevant preferential flow is under natural conditions, considering the site specific precipitation characteristics, the effect of the drying and wetting cycle on the initial soil water condition and shrinkage cracks, the site specific soil properties, soil structure and rock fragments, and the effect of plant roots and soil fauna (e.g. earthworm channels). In order to assess this question, we developed the distributed, process-based model RoGeR (Runoff Generation Research) to include a large number relevant features and processes of preferential flow in soils. The model was developed from a large number of process based research and experiments and includes preferential flow in roots, earthworm channels, along rock fragments and shrinkage cracks. We parameterized the uncalibrated model at a high spatial resolution of 5x5m for the whole state of Baden-Württemberg in Germany using LiDAR data, degree of sealing, landuse, soil properties and geology. As the model is an event based model, we derived typical event based precipitation characteristics based on rainfall duration, mean intensity and amount. Using the site-specific variability of initial soil moisture derived from a water balance model based on the same dataset, we simulated the infiltration and recharge amounts of all event classes derived from the event precipitation characteristics and initial soil moisture conditions. The analysis of the simulation results allowed us to extracts the relevance of preferential flow for infiltration and recharge considering all factors above. We could clearly see a strong effect of the soil properties and land-use, but also, particular for clay rich soils a strong effect of the initial conditions due to the development of soil cracks. Not too surprisingly, the relevance of preferential flow was much lower when considering the whole range of precipitation events as only considering events with a high rainfall intensity. Also, the influence on infiltration and recharge were different. Despite the model can still be improved in particular considering more realistic information about the spatial and temporal variability of preferential flow by soil fauna and plants, the model already shows under what situation we need to be very careful when predicting infiltration and recharge with models considering only longer time steps (daily) or only matrix flow.

The interaction of phytosiderophores with soil as a function of time

NASA Astrophysics Data System (ADS)

Schenkeveld, W. D. C.; Oburger, E.; Schindlegger, Y.; Regelsberger, A.; Hann, S.; Puschenreiter, M.; Kraemer, S. M.

2012-04-01

Graminaceous plant species (grasses) exude natural chelating agents, called phytosiderophores (PS) for the purpose of iron acquisition, in particular under conditions of iron deficiency stress. The biogeochemistry of phytosiderophores in the rhizosphere is still poorly understood. Processes like mobilization of iron or other metals by PS, and the degradation of the chelating agent were previously studied under conditions quite remote from those observed in the rhizosphere, e.g. in hydroponics systems or in soil suspensions with low soils to solution ratios. Such experimental conditions may lead to artifacts like for instance the depletion of available metal fractions. The aim of the present study is to contribute to a more accurate quantification of the source and sink terms determining PS concentrations in the rhizosphere. The mobilization of iron and other metals from two clay soils and two sandy soils by the PS deoxymugineic acid (DMA) was studied as a function of time in a batch experiment with a soil-solution ratio of 1. Both soils causing iron deficiency stress in plants and a reference soil not doing so were included. To examine the effect of ligand biodegradation on metal mobilization, treatments with and without sterilant (azide) were included. The fraction of added DMA mobilizing Fe ranged from 10 to 60% and correlates positively with Fe availability (DTPA-extractable Fe) and negatively with the clay content of the soils. In particular in soils of low Fe availability, Fe mobilization by DMA was severely compromised by mobilization of other metals including Cu, Zn, Ni and Co. The relative importance of Zn as competing cation decreases over time, while the importance of Cu increases. In the treatment without sterilant addition, metal-DMA complexes were removed from solution after 4 days in all soils; in the clay soils, Fe-DMA complexes were already removed before. The highest concentration of mobilized Fe did not depend on whether sterilant was added or not, except in one soil; this concentration was reached after 0.25 up to 8 hours. Also in treatments with sterilant addition, the FeDMA concentration eventually declined, but removal from solution was not complete when the experiment ended after one week. This indicates that besides biodegradation there are other processes significantly compromising the FeDMA concentration in the soil. In summary, these results emphasize the importance of the kinetics and thermodynamics of coupled rhizosphere processes for plant iron acquisition.

Woody vegetation and soil characteristics of residential forest patches and open spaces along an urban-to-rural gradient

Treesearch

Benjamin L. Reichert; Sharon R. Jean-Philippe; Christopher Oswalt; Jennifer Franklin; Mark Radosevich

2015-01-01

As the process of urbanization advances across the country, so does the importance of urban forests, which include both trees and the soils in which they grow. Soil microbial biomass, which plays a critical role in nutrient transformation in urban ecosystems, is affected by factors such as soil type and the availability of water, carbon, and nitrogen. The aim of this...

Potential for Remotely Sensed Soil Moisture Data in Hydrologic Modeling

NASA Technical Reports Server (NTRS)

Engman, Edwin T.

1997-01-01

Many hydrologic processes display a unique signature that is detectable with microwave remote sensing. These signatures are in the form of the spatial and temporal distributions of surface soil moisture and portray the spatial heterogeneity of hydrologic processes and properties that one encounters in drainage basins. The hydrologic processes that may be detected include ground water recharge and discharge zones, storm runoff contributing areas, regions of potential and less than potential ET, and information about the hydrologic properties of soils and heterogeneity of hydrologic parameters. Microwave remote sensing has the potential to detect these signatures within a basin in the form of volumetric soil moisture measurements in the top few cm. These signatures should provide information on how and where to apply soil physical parameters in distributed and lumped parameter models and how to subdivide drainage basins into hydrologically similar sub-basins.

Soil Health Assessment Approaches and the Cornell Framework

NASA Astrophysics Data System (ADS)

van Es, Harold

2016-04-01

Soil health constraints beyond nutrient limitations and excesses currently limit agroecosystem productivity and sustainability, resilience to drought and extreme rainfall, and progress in soil and water conservation. With mounting pressure to produce food, feed, fiber, and even fuel for an increasing population, the concept of soil health is gaining national and international attention. Multiple regional, national, and global efforts are now leveraging that work to reach new stakeholder audiences, so that soil health management is expanding into mainstream agriculture. Each grower is generally faced with a unique situation in the choice of management options to address soil health constraints and each system affords its own set of opportunities or limitations to soil management. A more comprehensive understanding of soil health status can better guide farmers' management decisions. Until recently, there has not been a formalized decision making process for implementing a soil health management system that alleviates field-specific constrains identified through standard measurements and then maintains improved soil health. This presentation will discuss current US-based efforts related to soil health assessment, including efforts to build national consensus on appropriate methods for simple (inexpensive) and comprehensive tests. This includes the Cornell Soil Health Management Planning and Implementation Framework. The most relevant components of the framework are 1) measurement of indicators that represent critical soil processes, 2) scoring of measured values that allows for interpretation, and 3) linkage of identified constraints with management practices. Land managers can monitor changes over time through further assessment, and adapt management practices to achieve chosen goals. We will discuss the full tests and approaches for simplification.

Biogenic nitric oxide emission from a spruce forest soil in mountainous terrain

NASA Astrophysics Data System (ADS)

Falge, Eva; Bargsten, Anika; Behrendt, Thomas; Meixner, Franz X.

2010-05-01

The process-based spatial simulation model SVAT-CN was used to estimate biogenic nitric oxide (NO) emission by soils of a Norway spruce forest (Weidenbrunnen) in the Fichtelgebirge, Germany. SVAT-CN core is a combination of a multiple-layer soil water balance model and a multi-layered canopy gas exchange model. The soil modules comprise a flexible hybrid between a layered bucket model and classical basic liquid flow theory. Further soil processes include: heat transport, distribution of transpiration demand proportionally to soil resistance, reduction of leaf physiological parameters with limiting soil moisture. Spruce forest soils usually are characterized by a thick organic layer (raw humus), with the topmost centimetres being the location where most of the biogenic NO is produced. Within individual spruce forest stands the understory might be composed of patches characterized by different species (e.g. Vaccinium myrtillus, Picea abies, Deschampsia caespitosa), and NO production potentials. The effect of soil physical and chemical parameters and understory types on NO emission from the organic layer was investigated in laboratory incubation and fumigation experiments on soils sampled below the various understory covers found at the Weidenbrunnen site. Results from the laboratory experiments were used to parameterize multi-factorial regression models of soil NO emission with respect to its response to soil temperature and moisture. Parameterization of the spatial model SVAT-CN includes horizontal heterogeneity of over- and understory PAI, understory species distribution, soil texture, bulk density, thickness of organic layer. Simulations are run for intensive observations periods of 2007 and 2008 of the EGER (ExchanGE processes in mountainous Regions) project, a late summer/fall and an early summer period, providing estimates for different understory types (young spruce, blueberry, grass, and moss/litter patches). Validation of the model is being carried out at point scale, by comparison with measured soil moisture and temperature data at 12 locations at the Weidenbrunnen site. In addition model output is compared to soil NO emission data from dynamic chambers. Understory type was found to have a strong influence on the magnitude of soil NO emissions, with emissions from blueberry and young spruce one order of magnitude larger than those from grass or moss/litter patches.

Bioremediation of oil-contaminated soils by composting

NASA Astrophysics Data System (ADS)

Golodyaev, G. P.; Kostenkov, N. M.; Oznobikhin, V. I.

2009-08-01

Composting oil-contaminated soils under field conditions with the simultaneous optimization of their physicochemical and agrochemical parameters revealed the high efficiency of the soil purification, including that from benz[a]pyrene. The application of fertilizers and lime favored the intense development of indigenous microcenoses and the effective destruction of the oil. During the 95-day experimental period, the average daily rate of the oil decomposition was 157 mg/kg of soil. After the completion of the process, the soil became ecologically pure.

Establishing an International Soil Modelling Consortium

NASA Astrophysics Data System (ADS)

Vereecken, Harry; Schnepf, Andrea; Vanderborght, Jan

2015-04-01

Soil is one of the most critical life-supporting compartments of the Biosphere. Soil provides numerous ecosystem services such as a habitat for biodiversity, water and nutrients, as well as producing food, feed, fiber and energy. To feed the rapidly growing world population in 2050, agricultural food production must be doubled using the same land resources footprint. At the same time, soil resources are threatened due to improper management and climate change. Soil is not only essential for establishing a sustainable bio-economy, but also plays a key role also in a broad range of societal challenges including 1) climate change mitigation and adaptation, 2) land use change 3) water resource protection, 4) biotechnology for human health, 5) biodiversity and ecological sustainability, and 6) combating desertification. Soils regulate and support water, mass and energy fluxes between the land surface, the vegetation, the atmosphere and the deep subsurface and control storage and release of organic matter affecting climate regulation and biogeochemical cycles. Despite the many important functions of soil, many fundamental knowledge gaps remain, regarding the role of soil biota and biodiversity on ecosystem services, the structure and dynamics of soil communities, the interplay between hydrologic and biotic processes, the quantification of soil biogeochemical processes and soil structural processes, the resilience and recovery of soils from stress, as well as the prediction of soil development and the evolution of soils in the landscape, to name a few. Soil models have long played an important role in quantifying and predicting soil processes and related ecosystem services. However, a new generation of soil models based on a whole systems approach comprising all physical, mechanical, chemical and biological processes is now required to address these critical knowledge gaps and thus contribute to the preservation of ecosystem services, improve our understanding of climate-change-feedback processes, bridge basic soil science research and management, and facilitate the communication between science and society . To meet these challenges an international community effort is required, similar to initiatives in systems biology, hydrology, and climate and crop research. We therefore propose to establish an international soil modelling consortium with the aims of 1) bringing together leading experts in modelling soil processes within all major soil disciplines, 2) addressing major scientific gaps in describing key processes and their long term impacts with respect to the different functions and ecosystem services provided by soil, 3) intercomparing soil model performance based on standardized and harmonized data sets, 4) identifying interactions with other relevant platforms related to common data formats, protocols and ontologies, 5) developing new approaches to inverse modelling, calibration, and validation of soil models, 6) integrating soil modelling expertise and state of the art knowledge on soil processes in climate, land surface, ecological, crop and contaminant models, and 7) linking process models with new observation, measurement and data evaluation technologies for mapping and characterizing soil properties across scales. Our consortium will bring together modelers and experimental soil scientists at the forefront of new technologies and approaches to characterize soils. By addressing these aims, the consortium will contribute to improve the role of soil modeling as a knowledge dissemination instrument in addressing key global issues and stimulate the development of translational research activities. This presentation will provide a compelling case for this much-needed effort, with a focus on tangible benefits to the scientific and food security communities.

Toxicological benchmarks for screening potential contaminants of concern for effects on soil and litter invertebrates and heterotrophic process

DOE Office of Scientific and Technical Information (OSTI.GOV)

Will, M.E.; Suter, G.W. II

1994-09-01

One of the initial stages in ecological risk assessments for hazardous waste sites is the screening of contaminants to determine which of them are worthy of further consideration as {open_quotes}contaminants of potential concern.{close_quotes} This process is termed {open_quotes}contaminant screening.{close_quotes} It is performed by comparing measured ambient concentrations of chemicals to benchmark concentrations. Currently, no standard benchmark concentrations exist for assessing contaminants in soil with respect to their toxicity to soil- and litter-dwelling invertebrates, including earthworms, other micro- and macroinvertebrates, or heterotrophic bacteria and fungi. This report presents a standard method for deriving benchmarks for this purpose, sets of data concerningmore » effects of chemicals in soil on invertebrates and soil microbial processes, and benchmarks for chemicals potentially associated with United States Department of Energy sites. In addition, literature describing the experiments from which data were drawn for benchmark derivation. Chemicals that are found in soil at concentrations exceeding both the benchmarks and the background concentration for the soil type should be considered contaminants of potential concern.« less

FLUORESCENT IN SITU HYBRIDIZATION AND MICROAUTORADIOGRAPHY APPLIED TO ECOPHYSIOLOGY IN SOIL

EPA Science Inventory

Soil microbial communities perform many important processes, including nutrient cycling, plant-microorganism interactions, and degradation of xenobiotics. The study of microbial communities, however, has been limited by cultural methods, which may greatly underestimate diversity....

Characterizing soil moisture and snow cover effects on boreal-arctic soil freeze/thaw dynamics and cold-season carbon emissions

NASA Astrophysics Data System (ADS)

Yi, Y.; Kimball, J. S.; Moghaddam, M.; Chen, R. H.; Reichle, R. H.; Oechel, W. C.; Zona, D.

2017-12-01

The contribution of cold season respiration to boreal-arctic carbon cycle and its potential feedbacks to climate change remain poorly quantified. Here, we developed an integrated modeling framework combining airborne low frequency (L+P-band) airborne radar retrievals and landscape level (≥1km) environmental observations from satellite optical and microwave sensors with a detailed permafrost carbon model to investigate underlying processes controlling soil freeze/thaw (FT) dynamics and cold season carbon emissions. The permafrost carbon model simulates the snow and soil thermal dynamics with soil water phase change included and accounts for soil carbon decomposition up to 3m below surface. Local-scale ( 50m) radar retrievals of active layer thickness (ALT), soil moisture and freeze/thaw (FT) status from NASA airborne UAVSAR and AirMOSS sensors are used to inform the model parameterizations of soil moisture effects on soil FT dynamics, and scaling properties of active layer processes. Both tower observed land-atmosphere fluxes and atmospheric CO2 measurements are used to evaluate the model processes controlling cold season carbon respiration, particularly the effects of snow cover and soil moisture on deep soil carbon emissions during the early cold season. Initial comparisons showed that the model can well capture the seasonality of cold season respiration in both tundra and boreal forest areas, with large emissions in late fall and early winter and gradually diminishing throughout the winter. Model sensitivity analyses are used to clarify how changes in soil thermodynamics at depth control the magnitude and seasonality of cold season respiration, and how a deeper unfrozen active layer with warming may contribute to changes in cold season respiration. Model outputs include ALT and regional carbon fluxes at 1-km resolution spanning recent satellite era (2001-present) across Alaska. These results will be used to quantify cold season respiration contributions to the annual carbon cycle and help close the boreal-arctic annual carbon budget.

CQESTR simulated response of soil organic carbon to management, yield, and climate change in northern Great Plains region

USDA-ARS?s Scientific Manuscript database

Traditional dryland crop management includes fallow and intensive tillage, which have reduced soil organic carbon (SOC) over the past century raising concerns regarding soil health and sustainability. The objectives of this study were to: 1) use CQESTR, a process-based C model, to simulate SOC dynam...

Direct monitoring of wind-induced pressure-pumping on gas transport in soil

NASA Astrophysics Data System (ADS)

Laemmel, Thomas; Mohr, Manuel; Schindler, Dirk; Schack-Kirchner, Helmer; Maier, Martin

2017-04-01

Gas exchange between soil and atmosphere is important for the biogeochemistry of soils and is commonly assumed to be governed by molecular diffusion. Yet a few previous field studies identified other gas transport processes such as wind-induced pressure-pumping to enhance soil-atmosphere fluxes significantly. However, since these wind-induced non-diffusive gas transport processes in soil often occur intermittently, the quantification of their contribution to soil gas emissions is challenging. To quantify the effects of wind-induced pressure-pumping on soil gas transport, we developed a method for in situ monitoring of soil gas transport. The method includes the use of Helium (He) as a tracer gas which was continuously injected into the soil. The resulting He steady-state concentration profile was monitored. Gas transport parameters of the soil were inversely modelled. We used our method during a field campaign in a well-aerated forest soil over three months. During periods of low wind speed, soil gas transport was modelled assuming diffusion as transport process. During periods of high wind speed, the previously steady diffusive He concentration profile showed temporary concentration decreases in the topsoil, indicating an increase of the effective gas transport rate in the topsoil up to 30%. The enhancement of effective topsoil soil gas diffusivity resulted from wind-induced air pressure fluctuations which are referred to as pressure-pumping. These air pressure fluctuations had frequencies between 0.1 and 0.01 Hz and amplitudes up to 10 Pa and occurred at above-canopy wind speeds greater than 5 m s-1. We could show the importance of the enhancement of the gas transport rate in relation with the wind intensity and corresponding air pressure fluctuations characteristics. We directly detected and quantified the pressure-pumping effect on gas transport in soil in a field study for the first time, and could thus validate and underpin the importance of this non-diffusive gas transport process. Our method can also be used to study other non-diffusive gas transport processes occurring in soil and snow, and their possible feedbacks or interactions with biogeochemical processes.

Spectral Characteristics of Salinized Soils during Microbial Remediation Processes.

PubMed

Ma, Chuang; Shen, Guang-rong; Zhi, Yue-e; Wang, Zi-jun; Zhu, Yun; Li, Xian-hua

2015-09-01

In this study, the spectral reflectance of saline soils, the associated soil salt content (SSC) and the concentrations of salt ions were measured and analysed by tracing the container microbial remediation experiments for saline soil (main salt is sodium chloride) of Dongying City, Shandong Province. The sensitive spectral reflectance bands of saline soils to SSC, Cl- and Na+ in the process of microbial remediation were analysed. The average-dimension reduction of these bands was conducted by using a combination of correlation coefficient and decision coefficient, and by gradually narrowing the sampling interval method. Results showed that the tendency and magnitude of the average spectral reflectance in all bands of saline soils during the total remediation processes were nearly consistent with SSC and with Cl- coocentration, respectively. The degree of salinity of the soil, including SSC and salt ion concentrations, had a significant positive correlation with the spectral reflectance of all bands, particularly in the near-infrared band. The optimal spectral bands of SSC were 1370 to 1445 nm and 1447 to 1608 nm, whereas the optimal spectral bands of Cl- and Na+ were 1336 to 1461 nm and 1471 to 1561 nm, respectively. The relationship model among SSC, soil salt ion concentrations (Cl- and Na+) and soil spectral reflectance of the corresponding optimal spectral band was established. The largest R2 of relationship model between SSC and the average reflectance of associated optimal band reached to 0.95, and RMSEC and RMSEP were 1.076 and 0.591, respectively. Significant statistical analysis of salt factors and soil reflectance for different microbial remediation processes indicated that the spectral response characteristics and sensitivity of SSC to soil reflectance, which implied the feasibility of high spectrum test on soil microbial remediation monitoring, also provided the basis for quick nondestructive monitoring soil bioremediation process by soil spectral reflectance.

Ecological Drivers of Biogeographic Patterns of Soil Archaeal Community

PubMed Central

Zheng, Yuan-Ming; Cao, Peng; Fu, Bojie; Hughes, Jane M.; He, Ji-Zheng

2013-01-01

Knowledge about the biogeography of organisms has long been a focus in ecological research, including the mechanisms that generate and maintain diversity. In this study, we targeted a microbial group relatively underrepresented in the microbial biogeographic literature, the soil Archaea. We surveyed the archaeal abundance and community composition using real-time quantitative PCR and T-RFLP approaches for 105 soil samples from 2 habitat types to identify the archaeal distribution patterns and factors driving these patterns. Results showed that the soil archaeal community was affected by spatial and environmental variables, and 79% and 51% of the community variation was explained in the non-flooded soil (NS) and flooded soil (FS) habitat, respectively, showing its possible biogeographic distribution. The diversity patterns of soil Archaea across the landscape were influenced by a combination of stochastic and deterministic processes. The contribution from neutral processes was higher than that from deterministic processes associated with environmental variables. The variables pH, sample depth and longitude played key roles in determining the archaeal distribution in the NS habitat, while sampling depth, longitude and NH4 +-N were most important in the FS habitat. Overall, there might be similar ecological drivers in the soil archaeal community as in macroorganism communities. PMID:23717418

A Comparison of One-Dimensional Hydrologic Models Using Soil Moisture Observations under Urban Irrigation in a Desert Climate

NASA Astrophysics Data System (ADS)

Volo, T. J.; Vivoni, E. R.; Martin, C. A.; Wang, Z.; Ruddell, B.

2012-12-01

Through the past several decades, rapid population growth in the arid American Southwest has dramatically changed patterns of plant-available water through municipal and residential irrigation systems that provide supplemental water to designed and managed urban landscape vegetation. Urban irrigation, including diversion of rainwater and addition of imported water, has thereby enabled the transformation of areas once covered by bare soil and low water-use, native desert plant species to large tracts of exotic, high water-use turf grass and shade trees. Despite the large percentage of residential water appropriated to irrigation purposes, models of urban hydrology often fail to include the impact that this anthropogenic input has on water, energy, and biomass conditions. This study utilizes two one-dimensional soil moisture models to examine the importance of representing different processes in a quantitative urban ecohydrology model under irrigation scenarios. Such processes include sub-daily energy fluxes, vertical redistribution of soil moisture, saturation- and infiltration-excess runoff mechanisms, seasonally variable irrigation scheduling, and soil moisture control on evapotranspiration rates. The analysis is informed by soil moisture observations from an experimental sensor network in the Phoenix, Arizona metropolitan area. The network includes data from several different landscape and irrigation treatments representative of pre- and post-development conditions in the region. By interpreting soil moisture levels in terms of plant water stress, this study analyzes the effectiveness of urban irrigation practices in arid climates. Furthermore, by identifying the necessary hydrologic processes to represent in an urban ecohydrology model, our results inform future work in adapting a distributed hydrologic model to desert urban settings where irrigation plays a significant role in minimizing plant water stress. An appropriate model of water and energy balances, calibrated using local meteorological forcing, can facilitate discussions with water managers and homeowners regarding optimal irrigation frequency, volume, duration, and seasonality for individual landscapes, while also aiding in water-efficient landscape design for growing cities in desert regions.

NASA Cold Land Processes Experiment (CLPX 2002/03): Field measurements of snowpack properties and soil moisture

Treesearch

Kelly Elder; Don Cline; Glen E. Liston; Richard Armstrong

2009-01-01

A field measurement program was undertaken as part NASA's Cold Land Processes Experiment (CLPX). Extensive snowpack and soil measurements were taken at field sites in Colorado over four study periods during the two study years (2002 and 2003). Measurements included snow depth, density, temperature, grain type and size, surface wetness, surface roughness, and...

Nitrogen deposition and cycling across an elevation and vegetation gradient in southern Appalachian forests

Treesearch

Jennifer D. Knoepp; James M. Vose; Wayne T. Swank

2008-01-01

We studied nitrogen (N) cycling pools and processes across vegetation and elevation gradients in. the southern Appalachian Mountains in SE USA. Measurements included bulk deposition input, watershed export, throughfall fluxes, litterfall, soil N pools and processes, and soil solution N. N deposition increased with elevation and ranged from 9.5 to 12.4 kg ha-...

Nature and Properties of Lateritic Soils Derived from Different Parent Materials in Taiwan

PubMed Central

2014-01-01

The objective of this study was to investigate the physical, chemical, and mineralogical composition of lateritic soils in order to use these soils as potential commercial products for industrial application in the future. Five lateritic soils derived from various parent materials in Taiwan, including andesite, diluvium, shale stone, basalt, and Pleistocene deposit, were collected from the Bt1 level of soil samples. Based on the analyses, the Tungwei soil is an alfisol, whereas other lateritic soils are ultisol. Higher pH value of Tungwei is attributed to the large amounts of Ca2+ and Mg2+. Loupi and Pingchen soils would be the older lateritic soils because of the lower active iron ratio. For the iron minerals, the magnetic iron oxides such as major amounts of magnetite and maghemite were found for Tamshui and Tungwei lateritic soils, respectively. Lepidocrocite was only found in Soka soil and intermediate amounts of goethite were detected for Loupi and Pingchen soils. After Mg-saturated and K-saturated processes, major amounts of mixed layer were observed in Loupi and Soka soils, whereas the montmorillonite was only detected in Tungwei soil. The investigation results revealed that the parent materials would play an important role during soil weathering process and physical, chemical, and mineralogy compositions strongly affect the formation of lateritic soils. PMID:24883366

Nature and properties of lateritic soils derived from different parent materials in Taiwan.

PubMed

Ko, Tzu-Hsing

2014-01-01

The objective of this study was to investigate the physical, chemical, and mineralogical composition of lateritic soils in order to use these soils as potential commercial products for industrial application in the future. Five lateritic soils derived from various parent materials in Taiwan, including andesite, diluvium, shale stone, basalt, and Pleistocene deposit, were collected from the Bt1 level of soil samples. Based on the analyses, the Tungwei soil is an alfisol, whereas other lateritic soils are ultisol. Higher pH value of Tungwei is attributed to the large amounts of Ca(2+) and Mg(2+). Loupi and Pingchen soils would be the older lateritic soils because of the lower active iron ratio. For the iron minerals, the magnetic iron oxides such as major amounts of magnetite and maghemite were found for Tamshui and Tungwei lateritic soils, respectively. Lepidocrocite was only found in Soka soil and intermediate amounts of goethite were detected for Loupi and Pingchen soils. After Mg-saturated and K-saturated processes, major amounts of mixed layer were observed in Loupi and Soka soils, whereas the montmorillonite was only detected in Tungwei soil. The investigation results revealed that the parent materials would play an important role during soil weathering process and physical, chemical, and mineralogy compositions strongly affect the formation of lateritic soils.

Complexity in Soil Systems: What Does It Mean and How Should We Proceed?

NASA Astrophysics Data System (ADS)

Faybishenko, B.; Molz, F. J.; Brodie, E.; Hubbard, S. S.

2015-12-01

The complex soil systems approach is needed fundamentally for the development of integrated, interdisciplinary methods to measure and quantify the physical, chemical and biological processes taking place in soil, and to determine the role of fine-scale heterogeneities. This presentation is aimed at a review of the concepts and observations concerning complexity and complex systems theory, including terminology, emergent complexity and simplicity, self-organization and a general approach to the study of complex systems using the Weaver (1948) concept of "organized complexity." These concepts are used to provide understanding of complex soil systems, and to develop experimental and mathematical approaches to soil microbiological processes. The results of numerical simulations, observations and experiments are presented that indicate the presence of deterministic chaotic dynamics in soil microbial systems. So what are the implications for the scientists who wish to develop mathematical models in the area of organized complexity or to perform experiments to help clarify an aspect of an organized complex system? The modelers have to deal with coupled systems having at least three dependent variables, and they have to forgo making linear approximations to nonlinear phenomena. The analogous rule for experimentalists is that they need to perform experiments that involve measurement of at least three interacting entities (variables depending on time, space, and each other). These entities could be microbes in soil penetrated by roots. If a process being studied in a soil affects the soil properties, like biofilm formation, then this effect has to be measured and included. The mathematical implications of this viewpoint are examined, and results of numerical solutions to a system of equations demonstrating deterministic chaotic behavior are also discussed using time series and the 3D strange attractors.

Sources of nitric oxide and nitrous oxide following wetting of dry soil

NASA Technical Reports Server (NTRS)

Davidson, Eric A.

1992-01-01

A study is presented which is aimed at distinguishing among autotrophic nitrification, denitrification, and abiological processes as sources of NO and N2O production following wetting of dry soil. To distinguish among these processes, combinations of treatments in laboratory incubations of soil were used which included varying soil water content, autoclaving, C2H2 inhibition, and NO2(-) addition. Biological sources of NO and N2O commenced within minutes of wetting dry soil. Acetylene inhibition revealed that emissions of NO were dependent on nitrification, although a combination of NO2(-) production by nitrifiers and abiological reduction of NO2(-) to NO is also possible. NO emissions exceeded N2O emissions, and nitrification was the dominant source of both gases when soil water was below field capacity. It is concluded that NO emissions appear to be more important when good soil aeration favors nitrification, whereas N2O emissions appear more important when elevated soil water favors denitrification.

Automated image processing of Landsat II digital data for watershed runoff prediction

NASA Technical Reports Server (NTRS)

Sasso, R. R.; Jensen, J. R.; Estes, J. E.

1977-01-01

Digital image processing of Landsat data from a 230 sq km area was examined as a possible means of generating soil cover information for use in the watershed runoff prediction of Kern County, California. The soil cover information included data on brush, grass, pasture lands and forests. A classification accuracy of 94% for the Landsat-based soil cover survey suggested that the technique could be applied to the watershed runoff estimate. However, problems involving the survey of complex mountainous environments may require further attention

Determining Consistency of Tillage Direction with Soil Erosion Protection Requirements as The Element of Decision-Making Process in Planning and Applying Land Consolidation

NASA Astrophysics Data System (ADS)

Bozek, Piotr; Janus, Jaroslaw; Taszakowski, Jaroslaw; Glowacka, Agnieszka

2016-10-01

Water erosion is one of the factors which have negative effect on soil productivity. It often leads to irreversible soil degradation, making soil worthless for agricultural activities. One way of preventing water erosion is making the direction of cultivation perpendicular to the direction of rainwater run-off. Matching the direction with the shape of parcels boundaries in small and extended ones is often possible only through changes in the configuration of property boundaries, which is possible only in the process of land consolidation. The article presents methodology of qualifying the areas for changes in boundaries configuration and cultivation direction in view of existing erosion risk. A computation process was suggested that uses, among others, LIDAR data to model the terrain shape precisely as well as cadastral data that defines the geometry of parcels and, resulting from it, the direction of cultivation and form of use. The suggested process includes also the information on the texture of soil upper horizons from soil agricultural maps. The RUSLE erosion model was applied and the computation process took place in ArcGIS environment with the use of dedicated algorithms suggested and implemented to solve the formulated problem. Computations were conducted for test area of several hundred hectares which was characterized by vast diversity of soil types and landforms. The results prove the usefulness of the suggested method as an element of systems that support decision-making processes used in the stage of determining objects chosen for the realization of consolidating processes (including local consolidation, which covers only chosen fragment of a village). They can also be used in the stage of completing detailed plans of parcels distribution in land consolidation process. The importance of the method is particularly seen in the analysis of areas where land fragmentation indices are unfavourable. Especially in these cases, without the reorganization of boundaries, it is impossible to adapt the direction of cultivation to the requirements of protection against erosion.

SoilJ - An ImageJ plugin for semi-automatized image-processing of 3-D X-ray images of soil columns

NASA Astrophysics Data System (ADS)

Koestel, John

2016-04-01

3-D X-ray imaging is a formidable tool for quantifying soil structural properties which are known to be extremely diverse. This diversity necessitates the collection of large sample sizes for adequately representing the spatial variability of soil structure at a specific sampling site. One important bottleneck of using X-ray imaging is however the large amount of time required by a trained specialist to process the image data which makes it difficult to process larger amounts of samples. The software SoilJ aims at removing this bottleneck by automatizing most of the required image processing steps needed to analyze image data of cylindrical soil columns. SoilJ is a plugin of the free Java-based image-processing software ImageJ. The plugin is designed to automatically process all images located with a designated folder. In a first step, SoilJ recognizes the outlines of the soil column upon which the column is rotated to an upright position and placed in the center of the canvas. Excess canvas is removed from the images. Then, SoilJ samples the grey values of the column material as well as the surrounding air in Z-direction. Assuming that the column material (mostly PVC of aluminium) exhibits a spatially constant density, these grey values serve as a proxy for the image illumination at a specific Z-coordinate. Together with the grey values of the air they are used to correct image illumination fluctuations which often occur along the axis of rotation during image acquisition. SoilJ includes also an algorithm for beam-hardening artefact removal and extended image segmentation options. Finally, SoilJ integrates the morphology analyses plugins of BoneJ (Doube et al., 2006, BoneJ Free and extensible bone image analysis in ImageJ. Bone 47: 1076-1079) and provides an ASCII file summarizing these measures for each investigated soil column, respectively. In the future it is planned to integrate SoilJ into FIJI, the maintained and updated edition of ImageJ with selected plugins.

A soil catena on schist in northwestern California

USGS Publications Warehouse

Marron, D.C.; Popenoe, J.H.

1986-01-01

Soil characteristics in a small steepland watershed underlain by schist in a rainy, tectonically active area in northwestern California show close associations with drainage-basin position and slope characteristics. Five soil-topography units based on these associations are defined in the study watershed. Spatial relationships of soil series, and patterns of soil development as indicated by B-horizon clay content and redness, reflect interactions between pedogenesis and erosion. General soil-topography patterns include: (1) decreases in soil-development moving from low-order to higher-order stream vallyes; and (2) more developed soils on north-facing as opposed to south-facing slopes. Decreases in soil-profile development moving from slopes near low-order streams to slopes near higher-order streams approximately correlate with increases in gradient, vertical relief, and drainage density, and reflect a more vigorous stripping of regolith by erosion on the slopes near the higher-order streams. The larger percentage of area covered by the more developed soils on north-facing as opposed to south-facing slopes appears to reflect a contrast in the way dominant erosional processes interact with pedogenic processes. Roadcuts on middle and upper slopes show soil discontinuities indicative of disturbance by block slides or slumps or both. Roadcuts on lower slopes show disrupted soils in small bedrock hollows that could have been created by rapid, shallow landslides or by the pulled-up root wads of toppled trees. Soil-profile characteristics and soil-topography patterns in the study area demonstrate that both erosional and pedogenic processes need to be considered when interpreting characteristics of hillslope soils. ?? 1986.

The soil microbiome — from metagenomics to metaphenomics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jansson, Janet K.; Hofmockel, Kirsten S.

Soil microorganisms carry out important processes, including support of plant growth and cycling of carbon and other nutrients. However, the majority of soil microbes have not yet been isolated and their functions are largely unknown. Although metagenomic sequencing reveals microbial identities and functional gene information, it includes DNA from microbes with vastly varying physiological states. Therefore, metagenomics is only predictive of community functional potential. We posit that the next frontier lies in understanding the metaphenome, the product of the combined genetic potential of the microbiome and available resources. Here in this paper we describe examples of opportunities towards gaining understandingmore » of the soil metaphenome.« less

The soil microbiome — from metagenomics to metaphenomics

DOE PAGES

Jansson, Janet K.; Hofmockel, Kirsten S.

2018-02-15

Soil microorganisms carry out important processes, including support of plant growth and cycling of carbon and other nutrients. However, the majority of soil microbes have not yet been isolated and their functions are largely unknown. Although metagenomic sequencing reveals microbial identities and functional gene information, it includes DNA from microbes with vastly varying physiological states. Therefore, metagenomics is only predictive of community functional potential. We posit that the next frontier lies in understanding the metaphenome, the product of the combined genetic potential of the microbiome and available resources. Here in this paper we describe examples of opportunities towards gaining understandingmore » of the soil metaphenome.« less

Increasing Efficiency of Water Use in Agriculture through Management of Soil Water Repellency to Optimize Soil and Water Productivity

NASA Astrophysics Data System (ADS)

Moore, Demie; Kostka, Stan; McMillan, Mica; Gadd, Nick

2010-05-01

Water's ability to infiltrate and disperse in soils, and soil's ability to receive, transport, retain, filter and release water are important factors in the efficient use of water in agriculture. Deteriorating soil conditions, including development of soil water repellency, negatively impact hydrological processes and, consequently, the efficiency of rainfall and irrigation. Soil water repellency is increasingly being identified in diverse soils and cropping systems. Recently research has been conducted on the use of novel soil surfactants (co-formulations of alkyl polyglycoside and block copolymer surfactants) to avoid or overcome soil water repellency and enhance water distribution in soils. Results indicate that this is an effective and affordable approach to maintaining or restoring soil and water productivity in irrigated cropping systems. Results from studies conducted in Australia and the United States to determine how this technology modifies soil hydrological behavior and crop yields will be presented. A range of soils and various crops, including potatoes, corn, apples and grapes, were included. Several rates were compared to controls for effect on soil moisture levels, soil water distribution, and crop yield. An economic analysis was also conducted in some trials. Treatments improved rootzone water status, significantly increased crop yield and quality, and in some cases allowed significant reductions in water requirements. Where assessed, a positive economic return was generated. This technology holds promise as a strategy for increasing efficiency of water use in agriculture.

Simulation of Soil Frost and Thaw Fronts Dynamics with Community Land Model 4.5

NASA Astrophysics Data System (ADS)

Gao, J.; Xie, Z.

2016-12-01

Freeze-thaw processes in soils, including changes in frost and thaw fronts (FTFs) , are important physical processes. The movement of FTFs affects soil water and thermal characteristics, as well as energy and water exchanges between land surface and the atmosphere, and then the land surface hydrothermal process. In this study, a two-directional freeze and thaw algorithm for simulating FTFs is incorporated into the community land surface model CLM4.5, which is called CLM4.5-FTF. The simulated FTFs depth and soil temperature of CLM4.5-FTF compared well with the observed data both in D66 station (permafrost) and Hulugou station (seasonally frozen soil). Because the soil temperature profile within a soil layer can be estimated according to the position of FTFs, CLM4.5 performed better in soil temperature simulation. Permafrost and seasonally frozen ground conditions in China from 1980 to 2010 were simulated using the CLM4.5-FTF. Numerical experiments show that the spatial distribution of simulated maximum frost depth by CLM4.5-FTF has seasonal variation obviously. Significant positive active-layer depth trends for permafrost regions and negative maximum freezing depth trends for seasonal frozen soil regions are simulated in response to positive air temperature trends except west of Black Sea.

[Effects of soil properties on the stabilization process of cadmium in Cd alone and Cd-Pb contaminated soils].

PubMed

Wu, Man; Xu, Ming-Gang; Zhang, Wen-Ju; Wu, Hai-Wen

2012-07-01

In order to clarify the effects of soil properties on the stabilization process of the cadmium (Cd) added, 11 different soils were collected and incubated under a moisture content of 65%-70% at 25 degrees C. The changes of available Cd contents with incubation time (in 360 days) in Cd and Cd-Pb contaminated treatments were determined. The stabilization process was simulated using dynamic equations. The results showed that after 1.0 mg x kg(-1) Cd or 500 mg x kg(-1) Pb + 1.0 mg x kg(-1) Cd were added into the soil, the available Cd content decreased rapidly during the first 15 days, and then the decreasing rate slowed down, with an equilibrium content reached after 60 days' incubation. In Cd-Pb contaminated soils, the presence of Pb increased the content of available Cd. The stabilization process of Cd could be well described by the second-order equation and the first order exponential decay; meanwhile, dynamic parameters including equilibrium content and stabilization velocity were used to characterize the stabilization process of Cd. These two key dynamic parameters were significantly affected by soil properties. Correlation analysis and stepwise regression suggested that high pH and high cation exchange capacity (CEC) significantly retarded the availability of Cd. High pH had the paramount effect on the equilibrium content. The stabilization velocity of Cd was influenced by the soil texture. It took shorter time for Cd to get stabilized in sandy soil than in the clay.

Working with soils: soil science continuing professional development

NASA Astrophysics Data System (ADS)

Hannam, Jacqueline; Thompson, Dick

2017-04-01

The British Society of Soil Science launched the Working with Soils professional competency programme in 2011. This was in response to concerns from practitioners and professionals of a significant skills gap in various sectors that require soil science skills. The programme includes one and two day courses that cover the qualifications, knowledge and skills required of a professional scientist or engineer conducting a range of contract work. All courses qualify for continuing professional development points with various professional practice schemes. Three courses cover the foundations of soil science namely; describing a soil profile, soil classification and understanding soil variability in the field and landscape. Other tailored courses relate to specific skills required from consultants particularly in the planning process where land is assessed for agricultural quality (agricultural land classification). New courses this year include soil handling and restoration that provides practitioners with knowledge of the appropriate management of large volumes of soil that are disturbed during development projects. The courses have so far successfully trained over 100 delegates ranging from PhD students, environmental consultants and government policy advisors.

Illuminating hydrological processes at the soil-vegetation-atmosphere interface with water stable isotopes

NASA Astrophysics Data System (ADS)

Sprenger, Matthias; Leistert, Hannes; Gimbel, Katharina; Weiler, Markus

2016-09-01

Water stable isotopes (18O and 2H) are widely used as ideal tracers to track water through the soil and to separate evaporation from transpiration. Due to the technical developments in the last two decades, soil water stable isotope data have become easier to collect. Thus, the application of isotope methods in soils is growing rapidly. Studies that make use of soil water stable isotopes often have a multidisciplinary character since an interplay of processes that take place in the vadose zone has to be considered. In this review, we provide an overview of the hydrological processes that alter the soil water stable isotopic composition and present studies utilizing pore water stable isotopes. The processes that are discussed include the water input as precipitation or throughfall, the output as evaporation, transpiration, or recharge, and specific flow and transport processes. Based on the review and supported by additional data and modeling results, we pose a different view on the recently proposed two water world hypothesis. As an alternative to two distinct pools of soil water, where one pool is enriched in heavy isotopes and used by the vegetation and the other pool does not undergo isotopic fractionation and becomes recharge, the water gets successively mixed with newly introduced rainwater during the percolation process. This way, water initially isotopically enriched in the topsoil loses the fractionation signal with increasing infiltration depth, leading to unfractionated isotopic signals in the groundwater.

The Impact of Rainfall on Soil Moisture Dynamics in a Foggy Desert.

PubMed

Li, Bonan; Wang, Lixin; Kaseke, Kudzai F; Li, Lin; Seely, Mary K

2016-01-01

Soil moisture is a key variable in dryland ecosystems since it determines the occurrence and duration of vegetation water stress and affects the development of weather patterns including rainfall. However, the lack of ground observations of soil moisture and rainfall dynamics in many drylands has long been a major obstacle in understanding ecohydrological processes in these ecosystems. It is also uncertain to what extent rainfall controls soil moisture dynamics in fog dominated dryland systems. To this end, in this study, twelve to nineteen months' continuous daily records of rainfall and soil moisture (from January 2014 to August 2015) obtained from three sites (one sand dune site and two gravel plain sites) in the Namib Desert are reported. A process-based model simulating the stochastic soil moisture dynamics in water-limited systems was used to study the relationships between soil moisture and rainfall dynamics. Model sensitivity in response to different soil and vegetation parameters under diverse soil textures was also investigated. Our field observations showed that surface soil moisture dynamics generally follow rainfall patterns at the two gravel plain sites, whereas soil moisture dynamics in the sand dune site did not show a significant relationship with rainfall pattern. The modeling results suggested that most of the soil moisture dynamics can be simulated except the daily fluctuations, which may require a modification of the model structure to include non-rainfall components. Sensitivity analyses suggested that soil hygroscopic point (sh) and field capacity (sfc) were two main parameters controlling soil moisture output, though permanent wilting point (sw) was also very sensitive under the parameter setting of sand dune (Gobabeb) and gravel plain (Kleinberg). Overall, the modeling results were not sensitive to the parameters in non-bounded group (e.g., soil hydraulic conductivity (Ks) and soil porosity (n)). Field observations, stochastic modeling results as well as sensitivity analyses provide soil moisture baseline information for future monitoring and the prediction of soil moisture patterns in the Namib Desert.

The Impact of Rainfall on Soil Moisture Dynamics in a Foggy Desert

PubMed Central

Li, Bonan; Wang, Lixin; Kaseke, Kudzai F.; Li, Lin; Seely, Mary K.

2016-01-01

Soil moisture is a key variable in dryland ecosystems since it determines the occurrence and duration of vegetation water stress and affects the development of weather patterns including rainfall. However, the lack of ground observations of soil moisture and rainfall dynamics in many drylands has long been a major obstacle in understanding ecohydrological processes in these ecosystems. It is also uncertain to what extent rainfall controls soil moisture dynamics in fog dominated dryland systems. To this end, in this study, twelve to nineteen months’ continuous daily records of rainfall and soil moisture (from January 2014 to August 2015) obtained from three sites (one sand dune site and two gravel plain sites) in the Namib Desert are reported. A process-based model simulating the stochastic soil moisture dynamics in water-limited systems was used to study the relationships between soil moisture and rainfall dynamics. Model sensitivity in response to different soil and vegetation parameters under diverse soil textures was also investigated. Our field observations showed that surface soil moisture dynamics generally follow rainfall patterns at the two gravel plain sites, whereas soil moisture dynamics in the sand dune site did not show a significant relationship with rainfall pattern. The modeling results suggested that most of the soil moisture dynamics can be simulated except the daily fluctuations, which may require a modification of the model structure to include non-rainfall components. Sensitivity analyses suggested that soil hygroscopic point (sh) and field capacity (sfc) were two main parameters controlling soil moisture output, though permanent wilting point (sw) was also very sensitive under the parameter setting of sand dune (Gobabeb) and gravel plain (Kleinberg). Overall, the modeling results were not sensitive to the parameters in non-bounded group (e.g., soil hydraulic conductivity (Ks) and soil porosity (n)). Field observations, stochastic modeling results as well as sensitivity analyses provide soil moisture baseline information for future monitoring and the prediction of soil moisture patterns in the Namib Desert. PMID:27764203

Soil Methane Sink Capacity Response to a Long-Term Wildfire Chronosequence in Northern Sweden.

PubMed

McNamara, Niall P; Gregg, Ruth; Oakley, Simon; Stott, Andy; Rahman, Md Tanvir; Murrell, J Colin; Wardle, David A; Bardgett, Richard D; Ostle, Nick J

2015-01-01

Boreal forests occupy nearly one fifth of the terrestrial land surface and are recognised as globally important regulators of carbon (C) cycling and greenhouse gas emissions. Carbon sequestration processes in these forests include assimilation of CO2 into biomass and subsequently into soil organic matter, and soil microbial oxidation of methane (CH4). In this study we explored how ecosystem retrogression, which drives vegetation change, regulates the important process of soil CH4 oxidation in boreal forests. We measured soil CH4 oxidation processes on a group of 30 forested islands in northern Sweden differing greatly in fire history, and collectively representing a retrogressive chronosequence, spanning 5000 years. Across these islands the build-up of soil organic matter was observed to increase with time since fire disturbance, with a significant correlation between greater humus depth and increased net soil CH4 oxidation rates. We suggest that this increase in net CH4 oxidation rates, in the absence of disturbance, results as deeper humus stores accumulate and provide niches for methanotrophs to thrive. By using this gradient we have discovered important regulatory controls on the stability of soil CH4 oxidation processes that could not have not been explored through shorter-term experiments. Our findings indicate that in the absence of human interventions such as fire suppression, and with increased wildfire frequency, the globally important boreal CH4 sink could be diminished.

Soil Methane Sink Capacity Response to a Long-Term Wildfire Chronosequence in Northern Sweden

PubMed Central

McNamara, Niall P.; Gregg, Ruth; Oakley, Simon; Stott, Andy; Rahman, Md. Tanvir; Murrell, J. Colin; Wardle, David A.; Bardgett, Richard D.; Ostle, Nick J.

2015-01-01

Boreal forests occupy nearly one fifth of the terrestrial land surface and are recognised as globally important regulators of carbon (C) cycling and greenhouse gas emissions. Carbon sequestration processes in these forests include assimilation of CO2 into biomass and subsequently into soil organic matter, and soil microbial oxidation of methane (CH4). In this study we explored how ecosystem retrogression, which drives vegetation change, regulates the important process of soil CH4 oxidation in boreal forests. We measured soil CH4 oxidation processes on a group of 30 forested islands in northern Sweden differing greatly in fire history, and collectively representing a retrogressive chronosequence, spanning 5000 years. Across these islands the build-up of soil organic matter was observed to increase with time since fire disturbance, with a significant correlation between greater humus depth and increased net soil CH4 oxidation rates. We suggest that this increase in net CH4 oxidation rates, in the absence of disturbance, results as deeper humus stores accumulate and provide niches for methanotrophs to thrive. By using this gradient we have discovered important regulatory controls on the stability of soil CH4 oxidation processes that could not have not been explored through shorter-term experiments. Our findings indicate that in the absence of human interventions such as fire suppression, and with increased wildfire frequency, the globally important boreal CH4 sink could be diminished. PMID:26372346

Changes in Fire-Derived Soil Black Carbon Storage in a Sub-humid Woodland

NASA Astrophysics Data System (ADS)

White, J. D.; Yao, J.; Murray, D. B.; Hockaday, W. C.

2014-12-01

Fire-derived black carbon (BC) in soil, including charcoal, represents a potentially important fraction of terrestrial carbon cycling due to its presumed long persistence in soil. Interpretation of site BC retention is important for assessing feedbacks to ecosystem processes including nutrient and water cycling. However, interaction between vegetation disturbance, BC formation, and off site transport may exist that complicate interpretation of BC addition to soils from wildfire or prescribed burns directly. To investigate the relationship between disturbance and site retention on soil BC, we determined BC concentrations for a woodland in central Texas, USA, from study plots in hilly terrain with a fire scar dendrochronology spanning 100 years. BC values were determined from 13C nuclear magnetic resonance (NMR) spectroscopy. Estimated values showed mean BC concentration of 2.73 ± 3.06 g BC kg-1 (0.91 ± 0.51 kg BC m-2) for sites with fire occurrence within the last 40 years compared with BC values of1.21 ± 1.70 g BC kg-1 soil (0.18 ± 0.14 kg BC m-2) for sites with fire 40 - 100 years ago. Sites with no tree ring evidence of fire during the last 100 years had the lowest mean soil BC concentration of 0.05 ± 0.11 g BC kg-1 (0.02 ± 0.03 kg BC m-2). Molecular proxies of stability (lignin/N) and decomposition (Alkyl C/O-Alky C) showed no differences across the sites, indicating that low potential for BC mineralization. Modeled soil erosion and time since fire from fire scar data showed that soil BC concentrations were inversely correlated. A modified the ecosystem process model, Biome-BGC, was also used simulate the effects of fire disturbance with different severities and seasonality on C cycling related to the BC production, effect on soil water availability, and off-site transport. Results showed that BC impacts on ecosystem processes, including net ecosystem exchange and leaf area development, were predominantly related to fire frequency. Site BC loss rates were affected by initial slope-affected erosion, fire severity, vegetation type, and rate of vegetation recovery. The simulation results showed that fire types, such as high severity, was generally associated with low site BC retention related to low vertical transfer of BC into soils, buoyancy of BC particles, and surface runoff from unvegetated soils.

Soil Functional Mapping: A Geospatial Framework for Scaling Soil Carbon Cycling

NASA Astrophysics Data System (ADS)

Lawrence, C. R.

2017-12-01

Climate change is dramatically altering biogeochemical cycles in most terrestrial ecosystems, particularly the cycles of water and carbon (C). These changes will affect myriad ecosystem processes of importance, including plant productivity, C exports to aquatic systems, and terrestrial C storage. Soil C storage represents a critical feedback to climate change as soils store more C than the atmosphere and aboveground plant biomass combined. While we know plant and soil C cycling are strongly coupled with soil moisture, substantial unknowns remain regarding how these relationships can be scaled up from soil profiles to ecosystems. This greatly limits our ability to build a process-based understanding of the controls on and consequences of climate change at regional scales. In an effort to address this limitation we: (1) describe an approach to classifying soils that is based on underlying differences in soil functional characteristics and (2) examine the utility of this approach as a scaling tool that honors the underlying soil processes. First, geospatial datasets are analyzed in the context of our current understanding of soil C and water cycling in order to predict soil functional units that can be mapped at the scale of ecosystems or watersheds. Next, the integrity of each soil functional unit is evaluated using available soil C data and mapping units are refined as needed. Finally, targeted sampling is conducted to further differentiate functional units or fill in any data gaps that are identified. Completion of this workflow provides new geospatial datasets that are based on specific soil functions, in this case the coupling of soil C and water cycling, and are well suited for integration with regional-scale soil models. Preliminary results from this effort highlight the advantages of a scaling approach that balances theory, measurement, and modeling.

Adsorption-desorption behavior of atrazine on agricultural soils in China.

PubMed

Yue, Lin; Ge, ChengJun; Feng, Dan; Yu, Huamei; Deng, Hui; Fu, Bomin

2017-07-01

Adsorption and desorption are important processes that affect atrazine transport, transformation, and bioavailability in soils. In this study, the adsorption-desorption characteristics of atrazine in three soils (laterite, paddy soil and alluvial soil) were evaluated using the batch equilibrium method. The results showed that the kinetics of atrazine in soils was completed in two steps: a "fast" adsorption and a "slow" adsorption and could be well described by pseudo-second-order model. In addition, the adsorption equilibrium isotherms were nonlinear and were well fitted by Freundlich and Langmuir models. It was found that the adsorption data on laterite, and paddy soil were better fitted by the Freundlich model; as for alluvial soil, the Langmuir model described it better. The maximum atrazine sorption capacities ranked as follows: paddy soil>alluvial soil>laterite. Results of thermodynamic calculations indicated that atrazine adsorption on three tested soils was spontaneous and endothermic. The desorption data showed that negative hysteresis occurred. Furthermore, lower solution pH value was conducive to the adsorption of atrazine in soils. The atrazine adsorption in these three tested soils was controlled by physical adsorption, including partition and surface adsorption. At lower equilibrium concentration, the atrazine adsorption process in soils was dominated by surface adsorption; while with the increase of equilibrium concentration, partition was predominant. Copyright © 2016. Published by Elsevier B.V.

Geochemical and Isotopic (Sr, U) Tracing of Weathering Processes Controlling the Recent Geochemical Evolution of Soil Solutions in the Strengbach Catchment (Vosges, France)

NASA Astrophysics Data System (ADS)

Chabaux, F. J.; Prunier, J.; Pierret, M.; Stille, P.

2012-12-01

The characterization of the present-day weathering processes controlling the chemical composition of waters and soils in natural ecosystems is an important issue to predict and to model the response of ecosystems to recent environmental changes. It is proposed here to highlight the interest of a multi-tracer geochemical approach combining measurement of major and trace element concentrations along with U and Sr isotopic ratios to progress in this topic. This approach has been applied to the small granitic Strengbah Catchment, located in the Vosges Mountain (France), used and equipped as a hydro-geochemical observatory since 1986 (Observatoire Hydro-Géochimique de l'Environnement; http://ohge.u-strasbg.fr). This study includes the analysis of major and trace element concentrations and (U-Sr) isotope ratios in soil solutions collected within two soil profiles located on two experimental plots of this watershed, as well as the analysis of soil samples and vegetation samples from these two plots The depth variation of elemental concentration of soil solutions confirms the important influence of the vegetation cycling on the budget of Ca, K, Rb and Sr, whereas Mg and Si budget in soil solutions are quasi exclusively controlled by weathering processes. Variation of Sr, and U isotopic ratios with depth also demonstrates that the sources and biogeochemical processes controlling the Sr budget of soil solutions is different in the uppermost soil horizons and in the deeper ones, and clearly influence by the vegetation cycling.

Unsaturated flow processes in structurally-variable pathways in wildfire-affected soils and ash

NASA Astrophysics Data System (ADS)

Ebel, B. A.

2016-12-01

Prediction of flash flood and debris flow generation in wildfire-affected soils and ash hinges on understanding unsaturated flow processes. Water resources issues, such as groundwater recharge, also rely on our ability to quantify subsurface flow. Soil-hydraulic property data provide insight into unsaturated flow processes and timescales. A literature review and synthesis of existing data from the literature for wildfire-affected soils, including ash and unburned soils, facilitated calculating metrics and timescales of hydrologic response related to infiltration and surface runoff generation. Sorptivity (S) and the Green-Ampt wetting front parameter (Ψf) were significantly lower in burned soils compared to unburned soils, while field-saturated hydraulic conductivity (Kfs) was not significantly different. The magnitude and duration of the influence of capillarity was substantially reduced in burned soils, leading to faster ponding times in response to rainfall. Ash had large values of S and Kfs compared to unburned and burned soils but intermediate values of Ψf, suggesting that ash has long ponding times in response to rainfall. The ratio of S2/Kfs was nearly constant ( 100 mm) for unburned soils, but was more variable in burned soils. Post-wildfire changes in this ratio suggested that unburned soils had a balance between gravity and capillarity contributions to infiltration, which may depend on soil organic matter, while burning shifted infiltration more towards gravity contributions by reducing S. Taken together, the changes in post-wildfire soil-hydraulic properties increased the propensity for surface runoff generation and may have enhanced subsurface preferential flow through pathways altered by wildfire.

Aliphatic, Cyclic, and Aromatic Organic Acids, Vitamins, and Carbohydrates in Soil: A Review

PubMed Central

Vranova, Valerie; Rejsek, Klement; Formanek, Pavel

2013-01-01

Organic acids, vitamins, and carbohydrates represent important organic compounds in soil. Aliphatic, cyclic, and aromatic organic acids play important roles in rhizosphere ecology, pedogenesis, food-web interactions, and decontamination of sites polluted by heavy metals and organic pollutants. Carbohydrates in soils can be used to estimate changes of soil organic matter due to management practices, whereas vitamins may play an important role in soil biological and biochemical processes. The aim of this work is to review current knowledge on aliphatic, cyclic, and aromatic organic acids, vitamins, and carbohydrates in soil and to identify directions for future research. Assessments of organic acids (aliphatic, cyclic, and aromatic) and carbohydrates, including their behaviour, have been reported in many works. However, knowledge on the occurrence and behaviour of D-enantiomers of organic acids, which may be abundant in soil, is currently lacking. Also, identification of the impact and mechanisms of environmental factors, such as soil water content, on carbohydrate status within soil organic matter remains to be determined. Finally, the occurrence of vitamins in soil and their role in biological and biochemical soil processes represent an important direction for future research. PMID:24319374

Aliphatic, cyclic, and aromatic organic acids, vitamins, and carbohydrates in soil: a review.

PubMed

Vranova, Valerie; Rejsek, Klement; Formanek, Pavel

2013-11-10

Organic acids, vitamins, and carbohydrates represent important organic compounds in soil. Aliphatic, cyclic, and aromatic organic acids play important roles in rhizosphere ecology, pedogenesis, food-web interactions, and decontamination of sites polluted by heavy metals and organic pollutants. Carbohydrates in soils can be used to estimate changes of soil organic matter due to management practices, whereas vitamins may play an important role in soil biological and biochemical processes. The aim of this work is to review current knowledge on aliphatic, cyclic, and aromatic organic acids, vitamins, and carbohydrates in soil and to identify directions for future research. Assessments of organic acids (aliphatic, cyclic, and aromatic) and carbohydrates, including their behaviour, have been reported in many works. However, knowledge on the occurrence and behaviour of D-enantiomers of organic acids, which may be abundant in soil, is currently lacking. Also, identification of the impact and mechanisms of environmental factors, such as soil water content, on carbohydrate status within soil organic matter remains to be determined. Finally, the occurrence of vitamins in soil and their role in biological and biochemical soil processes represent an important direction for future research.

On Russian concepts of Soil Memory - expansion of Dokuchaev's pedological paradigm

NASA Astrophysics Data System (ADS)

Tsatskin, A.

2012-04-01

Having developed from Dokuchaev's research on chernosem soils on loess, the Russian school of pedology traditionally focused on soils as essential component of landscape. Dokuchaev's soil-landscape paradigm (SLP) was later considerably advanced and expanded to include surface soils on other continents by Hans Jenny. In the 1970s Sokolov and Targulian in Russia introduced the new term of soil memory as an inherent ability of soils to memorize in its morphology and properties the processes of earlier stages of development. This understanding was built upon ideas of soil organizational hierarchy and different rates of specific soil processes as proposed by Yaalon. Soil memory terminology became particularly popular in Russia which is expressed in the 2008 multi-author monograph on soil memory. The Soil Memory book edited by Targulian and Goryachkin and written by 34 authors touches upon the following themes: General approaches (Section 1), Mineral carriers of soil memory (Section 2), Biological carriers of soil memory (section 3) and Anthropogenic soil memory (section 4). The book presents an original account on different new interdisciplinary projects on Russian soils and represents an important contribution into the classical Dokuchaev-Jenny SL paradigm. There is still a controversy as to in what way the Russian term soil memory is related to western terms of soil as a record or archive of earlier events and processes during the time of soil formation. Targulian and Goryachkin agree that all of the terms are close, albeit not entirely interchangeable. They insist that soil memory may have a more comprehensive meaning, e.g. applicable to such complex cases when certain soil properties whose origin is currently ambiguous cannot provide valid environmental reconstructions or dated by available dating techniques. Anyway, not terminology is the main issue. The Russian soil memory concept advances the frontiers of pedology by deepening the time-related soil functions and encouraging closer cooperation with isotope dating experts. This approach will hopefully help us all in better understanding, management and protection of the Earth's critical zone.

Phytoremediation-biorefinery tandem for effective clean-up of metal contaminated soil and biomass valorisation.

PubMed

Sotenko, Maria; Coles, Stuart; Barker, Guy; Song, Lijiang; Jiang, Ying; Longhurst, Philip; Romanova, Tamara; Shuvaeva, Olga; Kirwan, Kerry

2017-11-02

During the last few decades, phytoremediation process has attracted much attention because of the growing concerns about the deteriorating quality of soil caused by anthropogenic activities. Here, a tandem phytoremediation/biorefinery process was proposed as a way to turn phytoremediation into a viable commercial method by producing valuable chemicals in addition to cleaned soil. Two agricultural plants (Sinapis alba and Helianthus annuus) were grown in moderately contaminated soil with ca. 100 ppm of Ni and further degraded by a fungal lignin degrader-Phanerochaete chrysosporium. Several parameters have been studied, including the viability of plants, biomass yield, and their accumulating and remediating potentials. Further, downstream processing showed that up to 80% of Ni can be easily extracted from contaminated biomass by aqueous extraction at mild conditions. Finally, it was demonstrated that the growth of plants on the contaminated soil could be degraded by P. chrysosporium, and the effect of nickel and biomass pretreatment on the solid-state fermentation was studied. The proposed and studied methodology in this work could pave the way for successful commercialization of the phytoremediation process in the near future.

Underestimation of boreal soil carbon stocks by mathematical soil carbon models linked to soil nutrient status

NASA Astrophysics Data System (ADS)

Ťupek, Boris; Ortiz, Carina A.; Hashimoto, Shoji; Stendahl, Johan; Dahlgren, Jonas; Karltun, Erik; Lehtonen, Aleksi

2016-08-01

Inaccurate estimate of the largest terrestrial carbon pool, soil organic carbon (SOC) stock, is the major source of uncertainty in simulating feedback of climate warming on ecosystem-atmosphere carbon dioxide exchange by process-based ecosystem and soil carbon models. Although the models need to simplify complex environmental processes of soil carbon sequestration, in a large mosaic of environments a missing key driver could lead to a modeling bias in predictions of SOC stock change.We aimed to evaluate SOC stock estimates of process-based models (Yasso07, Q, and CENTURY soil sub-model v4) against a massive Swedish forest soil inventory data set (3230 samples) organized by a recursive partitioning method into distinct soil groups with underlying SOC stock development linked to physicochemical conditions.For two-thirds of measurements all models predicted accurate SOC stock levels regardless of the detail of input data, e.g., whether they ignored or included soil properties. However, in fertile sites with high N deposition, high cation exchange capacity, or moderately increased soil water content, Yasso07 and Q models underestimated SOC stocks. In comparison to Yasso07 and Q, accounting for the site-specific soil characteristics (e. g. clay content and topsoil mineral N) by CENTURY improved SOC stock estimates for sites with high clay content, but not for sites with high N deposition.Our analysis suggested that the soils with poorly predicted SOC stocks, as characterized by the high nutrient status and well-sorted parent material, indeed have had other predominant drivers of SOC stabilization lacking in the models, presumably the mycorrhizal organic uptake and organo-mineral stabilization processes. Our results imply that the role of soil nutrient status as regulator of organic matter mineralization has to be re-evaluated, since correct SOC stocks are decisive for predicting future SOC change and soil CO2 efflux.

Adaptive management for soil ecosystem services

USGS Publications Warehouse

Birge, Hannah E.; Bevans, Rebecca A.; Allen, Craig R.; Angeler, David G.; Baer, Sara G.; Wall, Diana H.

2016-01-01

Ecosystem services provided by soil include regulation of the atmosphere and climate, primary (including agricultural) production, waste processing, decomposition, nutrient conservation, water purification, erosion control, medical resources, pest control, and disease mitigation. The simultaneous production of these multiple services arises from complex interactions among diverse aboveground and belowground communities across multiple scales. When a system is mismanaged, non-linear and persistent losses in ecosystem services can arise. Adaptive management is an approach to management designed to reduce uncertainty as management proceeds. By developing alternative hypotheses, testing these hypotheses and adjusting management in response to outcomes, managers can probe dynamic mechanistic relationships among aboveground and belowground soil system components. In doing so, soil ecosystem services can be preserved and critical ecological thresholds avoided. Here, we present an adaptive management framework designed to reduce uncertainty surrounding the soil system, even when soil ecosystem services production is not the explicit management objective, so that managers can reach their management goals without undermining soil multifunctionality or contributing to an irreversible loss of soil ecosystem services.

Water movement and isoproturon behaviour in a drained heavy clay soil: 1. Preferential flow processes

NASA Astrophysics Data System (ADS)

Haria, A. H.; Johnson, A. C.; Bell, J. P.; Batchelor, C. H.

1994-12-01

The processes and mechanisms that control pesticide transport from drained heavy clay catchments are being studied at Wytham Farm (Oxford University) in southern England. In the first field season field-drain water contained high concentrations of pesticide. Soil studies demonstrated that the main mechanism for pesticide translocation was by preferential flow processes, both over the soil surface and through the soil profile via a macropore system that effectively by-passed the soil matrix. This macropore system included worm holes, shrinkage cracks and cracks resulting from ploughing. Rainfall events in early winter rapidly created a layer of saturation in the A horizon perched above a B horizon of very low hydraulic conductivity. Drain flow was initiated when the saturated layer in the A horizon extended into the upper 0.06m of the soil profile; thereafter water moved down slope via horizontal macropores possibly through a band of incorporated straw residues. These horizontal pathways for water movement connected with the fracture system of the mole drains, thus feeding the drains. Overland flow occurred infrequently during the season.

Full scale remediation of an explosives-contaminated site at Yorktown Naval Weapons Station using the SABRE{trademark} process

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kaake, R.H.; Bono, J.; Yergovich, T.

Characterization of a former weapons loading and assembly facility identified soil contaminated with the explosives TNT (2,4,6-trinitrotoluene) and RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine). The site contains of a variety of discrete soil types that include clay, sand, and humus. A portion of the site is also periodically submerged due to tidal action. Treatability studies were performed in conjunction with the Army Corps of Engineers Waterways Experiment Station. Studies indicated the SABRE Process could successfully treat the soil to the specified treatment goals. A full scale demonstration of the Simplot Anaerobic Biological Remediation (SABRE{trademark}) Process was carried out at the Yorktown, Virginia Naval Weaponsmore » Station. Over 650 yd{sup 3} of soil was treated to less than 2.5 mg/kg TNT in approximately 30 days. Initial concentrations were estimated to be 450 mg/kg. The soil was screened and placed into an in-ground, double-lined biocell using a soil fluidizing system.« less

Context dependency and saturating effects of loss of rare soil microbes on plant productivity.

PubMed

Hol, W H Gera; de Boer, Wietse; de Hollander, Mattias; Kuramae, Eiko E; Meisner, Annelein; van der Putten, Wim H

2015-01-01

Land use intensification is associated with loss of biodiversity and altered ecosystem functioning. Until now most studies on the relationship between biodiversity and ecosystem functioning focused on random loss of species, while loss of rare species that usually are the first to disappear received less attention. Here we test if the effect of rare microbial species loss on plant productivity depends on the origin of the microbial soil community. Soils were sampled from three land use types at two farms. Microbial communities with increasing loss of rare species were created by inoculating sterilized soils with serially diluted soil suspensions. After 8 months of incubation, the effects of the different soil communities on abiotic soil properties, soil processes, microbial community composition, and plant productivity was measured. Dilution treatments resulted in increasing species loss, which was in relation to abundance of bacteria in the original field soil, without affecting most of the other soil parameters and processes. Microbial species loss affected plant biomass positively, negatively or not at all, depending on soil origin, but not on land use history. Even within fields the effects of dilution on plant biomass varied between replicates, suggesting heterogeneity in microbial community composition. The effects of medium and severe species loss on plant biomass were similar, pointing toward a saturating effect of species loss. We conclude that changes in the composition of the soil microbial community, including rare species loss, can affect plant productivity, depending on the composition of the initial microbial community. Future work on the relation between function and species loss effects should address this variation by including multiple sampling origins.

Sustainable intensification by managing microbial communities and processes in agroecosystems

USDA-ARS?s Scientific Manuscript database

By focusing on soil biology and biochemistry, agroecosystem management strategies are implemented which include reduced soil disturbance, diverse and adaptable crop rotations, retention of residue, and incorporation of livestock, cover crops, or both This systems approach is required to sustainably ...

A meta-analysis of soil biodiversity impacts on the carbon cycle

NASA Astrophysics Data System (ADS)

de Graaff, M.-A.; Adkins, J.; Kardol, P.; Throop, H. L.

2015-03-01

Loss of biodiversity impacts ecosystem functions, such as carbon (C) cycling. Soils are the largest terrestrial C reservoir, containing more C globally than the biotic and atmospheric pools together. As such, soil C cycling, and the processes controlling it, has the potential to affect atmospheric CO2 concentrations and subsequent climate change. Despite the growing evidence of links between plant diversity and soil C cycling, there is a dearth of information on whether similar relationships exist between soil biodiversity and C cycling. This knowledge gap occurs even though there has been increased recognition that soil communities display high levels of both taxonomic and functional diversity and are key drivers of fluxes of C between the atmosphere and terrestrial ecosystems. Here, we used meta-analysis and regression analysis to quantitatively assess how soil biodiversity affects soil C cycling pools and processes (i.e., soil C respiration, litter decomposition, and plant biomass). We compared the response of process variables to changes in diversity both within and across groups of soil organisms that differed in body size, a grouping that typically correlates with ecological function. When studies that manipulated both within- and across-body size group diversity were included in the meta-analysis, loss of diversity significantly reduced soil C respiration (-27.5%) and plant tissue decomposition (-18%) but did not affect above- or belowground plant biomass. The loss of within-group diversity significantly reduced soil C respiration, while loss of across-group diversity did not. Decomposition was negatively affected both by loss of within-group and across-group diversity. Furthermore, loss of microbial diversity strongly reduced soil C respiration (-41%). In contrast, plant tissue decomposition was negatively affected by loss of soil faunal diversity but was unaffected by loss of microbial diversity. Taken together, our findings show that loss of soil biodiversity strongly impacts on soil C cycling processes, and highlight the importance of diversity across groups of organisms (e.g., primary consumers and secondary decomposers) for maintaining full functionality of C cycle processes. However, our understanding of the complex relationships between soil biodiversity and C cycling processes is currently limited by the sheer number of methodological concerns associated with these studies, which can greatly overestimate or underestimate the impact of soil biodiversity on soil C cycling, challenging extrapolation to natural field settings. Future studies should attempt to further elucidate the relative importance of taxonomic diversity (species numbers) versus functional diversity.

Chemical transport during formation and alteration of Martian impact and volcanic deposits

NASA Technical Reports Server (NTRS)

Newsom, H. E.

1992-01-01

Much of the surface of Mars, including volcanic and cratered terrains, probably experienced alteration and degassing processes. These processes may have depleted or enriched many important elements in surface materials, including bedrock, dust, and soils. The composition of the martian soil may represent the best estimate, for some elements, of the average composition of the martian crust, similar to the composition of loess created by glacial action on the Earth. The martian soil may represent the only convenient, globally or regionally averaged sample of the martian crust. In order to understand the composition of the source material for the soil, however, we need to understand the contributions of volcanic vs. impact sources for this material and the chemical fractionations involved in its production. The processes to be addressed include degassing of volcanic deposits, as observed in the Valley of Ten Thousand Smokes at Katmai, Alaska, and degassing of meltbearing impact ejecta as inferred for suevite ejecta sheets at the Ries Crater, and alteration or palagonitization of volcanic deposits, as documented for volcanos in British Columbia and many other volcanic terrains, and impact crater deposits. The process of palagonitization has been the subject of several studies with reference to Mars, and palagonite is a good analogue for the spectroscopic properties of the martian dust. The role of impact in cratering has not been as well studied, although other researchers have established that both degassing and alteration are common features of impact crater deposits. Other relevant sources of experimental data include the extensive literature on the corrosion of nuclear waste glass and leaching of shocked materials.

Interactions between soil thermal and hydrological dynamics in the response of Alaska ecosystems to fire disturbance

USGS Publications Warehouse

Yi, Shuhua; McGuire, A. David; Harden, Jennifer; Kasischke, Eric; Manies, Kristen L.; Hinzman, Larry; Liljedahl, Anna K.; Randerson, J.; Liu, Heping; Romanovsky, Vladimir E.; Marchenko, Sergey S.; Kim, Yongwon

2009-01-01

Soil temperature and moisture are important factors that control many ecosystem processes. However, interactions between soil thermal and hydrological processes are not adequately understood in cold regions, where the frozen soil, fire disturbance, and soil drainage play important roles in controlling interactions among these processes. These interactions were investigated with a new ecosystem model framework, the dynamic organic soil version of the Terrestrial Ecosystem Model, that incorporates an efficient and stable numerical scheme for simulating soil thermal and hydrological dynamics within soil profiles that contain a live moss horizon, fibrous and amorphous organic horizons, and mineral soil horizons. The performance of the model was evaluated for a tundra burn site that had both preburn and postburn measurements, two black spruce fire chronosequences (representing space-for-time substitutions in well and intermediately drained conditions), and a poorly drained black spruce site. Although space-for-time substitutions present challenges in model-data comparison, the model demonstrates substantial ability in simulating the dynamics of evapotranspiration, soil temperature, active layer depth, soil moisture, and water table depth in response to both climate variability and fire disturbance. Several differences between model simulations and field measurements identified key challenges for evaluating/improving model performance that include (1) proper representation of discrepancies between air temperature and ground surface temperature; (2) minimization of precipitation biases in the driving data sets; (3) improvement of the measurement accuracy of soil moisture in surface organic horizons; and (4) proper specification of organic horizon depth/properties, and soil thermal conductivity.

Natural abiotic formation of oxalic acid in soils: results from aromatic model compounds and soil samples.

PubMed

Studenroth, Sabine; Huber, Stefan G; Kotte, Karsten; Schöler, Heinz F

2013-02-05

Oxalic acid is the smallest dicarboxylic acid and plays an important role in soil processes (e.g., mineral weathering and metal detoxification in plants). We have first proven its abiotic formation in soils and investigated natural abiotic degradation processes based on the oxidation of soil organic matter, enhanced by Fe(3+) and H(2)O(2) as hydroxyl radical suppliers. Experiments with the model compound catechol and further hydroxylated benzenes were performed to examine a common degradation pathway and to presume a general formation mechanism of oxalic acid. Two soil samples were tested for the release of oxalic acid and the potential effects of various soil parameters on oxalic acid formation. Additionally, the soil samples were treated with different soil sterilization methods to prove the oxalic acid formation under abiotic soil conditions. Different series of model experiments were conducted to determine a range of factors including Fe(3+), H(2)O(2), reaction time, pH, and chloride concentration on oxalic acid formation. Under certain conditions, catechol is degraded up to 65.6% to oxalic acid referring to carbon. In serial experiments with two soil samples, oxalic acid was produced, and the obtained results are suggestive of an abiotic degradation process. In conclusion, Fenton-like conditions with low Fe(3+) concentrations and an excess of H(2)O(2) as well as acidic conditions were required for an optimal oxalic acid formation. The presence of chloride reduced oxalic acid formation.

Dust emission and soil loss due to anthropogenic activities by wind erosion simulations

NASA Astrophysics Data System (ADS)

Katra, Itzhak; Swet, Nitzan; Tanner, Smadar

2017-04-01

Wind erosion is major process of soil loss and air pollution by dust emission of clays, nutrients, and microorganisms. Many soils throughout the world are currently or potentially associated with dust emissions, especially in dryland zones. The research focuses on wind erosion in semi-arid soils (Northern Negev, Israel) that are subjected to increased human activities of urban development and agriculture. A boundary-layer wind tunnel has been used to study dust emission and soil loss by simulation and quantification of high-resolution wind processes. Field experiments were conducted in various surface types of dry loess soils. The experimental plots represent soils with long-term and short term influences of land uses such as agriculture (conventional and organic practices), grazing, and natural preserves. The wind tunnel was operated under various wind velocities that are above the threshold velocity of aeolian erosion. Total soil sediment and particulate matter (PM) fluxes were calculated. Topsoil samples from the experimental plots were analysed in the laboratory for physical and chemical characteristics including aggregation, organic matter, and high-resolution particle size distribution. The results showed variations in dust emission in response to surface types and winds to provide quantitative estimates of soil loss over time. Substantial loss of particulate matter that is < 10 micrometer in diameter, including clays and nutrients, was recorded in most experimental conditions. Integrative analyses of the topsoil properties and dust experiment highlight the significant implications for soil nutrient resources and management strategies as well as for PM loading to the atmosphere and air pollution.

Influence of redox fluctuations and rainfall on pedogenic iron alteration and soil magnetic properties (Invited)

NASA Astrophysics Data System (ADS)

Thompson, A.; Rancourt, D.; Chadwick, O.; Chorover, J. D.

2009-12-01

Soil iron mineral composition emerges from a dynamic interplay between processes causing selective mineral addition/removal (both physically and chemically-driven) and processes affecting in situ mineral transformation. Discerning the influence of these pedogenic processes in a temporally integrated manner is fundamentally relevant to many biogeochemical questions. Among them is to what extent the Fe-mineral system can be used to constrain paleo-interpretations of oceanic sediments and geological deposits. Here we describe results from field and laboratory experiments designed to explore the effects of variable redox conditions on soil iron mineral transformation. Our experimental systems include: (1) a climate gradient of basaltic soils from the island of Maui, HI (MCG) with a documented decrease in Eh. and (2) laboratory incubations where we subjected soil slurries to a series of bacterially-driven reduction-oxidation cycles. Our prior work in these systems examining the iron isotopic and mineral composition will be combined with in-progress analysis of magnetic susceptibility. Current results indicate that across the field gradient (MCG) we find average increases of 0.56‰±0.09‰ δ56Fe for the surface and subsurface soils that correlate very well (R2=0.88) with 57Fe Mössbauer-determined Fe-oxyhydroxide fraction. Such a correlation is difficult to explain on the basis of strict parameter co-variation with rainfall, and suggests isotopic and mineral composition may be coupled through in situ mineral transformation processes in these soils. In our soil slurry incubation experiments we reported previously that repeated redox oscillations generate a cumulative increase in Fe mineral crystallinity. Integration of these results with magnetic susceptibility measurements will provide the context for discussing how dynamic redox processes alter soil magnetic properties most often drawn on for paleoclimate interpretations.

The contribution of the European Society for Soil Conservation (ESSC) to scientific knowledge, education and sustainability

NASA Astrophysics Data System (ADS)

Dazzi, Carmelo; Fullen, Michael A.; Costantini, Edoardo A. C.; Theocharopoulos, Sid; Rickson, Jane; Kasparinskis, Raimonds; Lo Papa, Giuseppe; Peres, Guenola; Sholten, Thomas; Kertész, Adam; Vasenev, Ivan; Dumitru, Mihail; Cornelis, Wim; Rubio, José L.

2017-04-01

Soil is an integral component of the global environmental system that supports the quality and diversity of terrestrial life on Earth. Therefore, it is vital to consider the processes and impacts of soil degradation on society, especially on the provision of environmental goods and services, including food security and climate change mitigation and adaptation. Scientific societies devoted to Soil Science play significant roles in promoting soil security by advancing scientific knowledge, education and environmental sustainability. The European Society for Soil Conservation (ESSC) was founded in Ghent (Belgium) on 4 November 1988 by a group of 23 researchers from several European countries. It is an interdisciplinary, non-political association with over 500 members in 56 countries. The ESSC produces and distributes a hardcopy Newsletter twice a year and maintains both a website and Facebook page: http://www.soilconservation.eu/ https://www.facebook.com/European-Society-for-Soil-Conservation-ESSC-100528363448094/ The ESSC aims to: • Support research on soil degradation, soil protection and soil and water conservation. • Provide a network for the exchange of knowledge about soil degradation processes and soil conservation research and practises. • Produce publications on major issues relating to soil degradation and soil and water conservation. • Advise regulators and policy-makers on soil issues, especially soil degradation, protection and conservation. The ESSC held its First International Congress in Silsoe (UK) in 1992. Further International Congresses were held in Munich (1996), Valencia (2000), Budapest (2004), Palermo (2007), Thessaloniki (2011) and Moscow (2015). The Eighth International Congress will be held in Lleida (Spain) in June 2017: http://www.consowalleida2017.com/ Interspersed between these international congresses, the ESSC organizes annual international conferences on specific topics. These include Imola, Italy (Biogeochemical Processes at Air-Soil-Water Interfaces and Environmental Protection) in 2015 and Cluj-Napoca, Romania (Soil: Our Common Future) in 2016. Since its inception, the Society has made significant advances, including developing a strong and growing global network of soil scholars. The ESSC honours major individual contributions to soil conservation through two awards made every four years at its Congresses, namely: • The 'Gerold Richter Award,' awarded to a person who has, over their career, made significant and internationally recognized contributions to the investigation and/or promotion of soil conservation in Europe. • The 'Young Person's Award' is presented to a member of the Society, aged 40 years or less, who over the previous four years has made important contributions to soil conservation in Europe through research, practise, policy-making or another relevant activity. The ESSC provides grants to young members to attend its conferences and promotes the organization of scientific meetings, soil conservation research, and co-operation between numerous institutions and individuals on soil conservation initiatives. The societal challenges that can be addressed through better soil protection, as well as developing new knowledge and scientific approaches to soil protection and sustainable management, mean the ESSC embraces the on-going development, application, review and criticism of highly innovative scientific methods for soil conservation. It is in this context that the ESSC analyses and publicizes the roles and functions of soil in natural and human-modified systems and the functional optimization of soils to ensure sustainable environmental protection.

Soil Carbon Distribution along a Hill Slope in the Siberian Arctic

NASA Astrophysics Data System (ADS)

Ludwig, S.; Bunn, A. G.; Schade, J. D.

2011-12-01

Arctic ecosystems are warming at an accelerated rate relative to lower latitudes, and this warming has significant global significance. In particular, the thawing of permafrost soils has the potential to strongly influence global carbon cycling and the functioning of terrestrial and aquatic ecosystems. Our overarching scientific goal is to study the impact of thawing permafrost on the transport and processing of carbon and other nutrients as they move with water from terrestrial ecosystems to the Arctic Ocean. Transport of materials from soil to headwater aquatic ecosystems is the first step in this movement. Processes occurring along hill slopes strongly influence the form and concentration of material available for transport. These processes include downhill accumulation of materials due to groundwater movement, or alternatively, local effects of changes in soil and vegetation characteristics. In this project, we studied a hill slope adjacent to a small first order stream in the Kolyma River in Eastern Siberia. We sampled soil at several points along three transects from the top of the hill to the riparian zone by coring and homogenizing the entire active layer at each point. We measured soil organic matter content, soil moisture, water extractable dissolved organic carbon (DOC), total dissolved nitrogen (TDN), NH4, NO3, soluble reactive phosphorus (SRP), and CDOM absorbance. We also measured soil respiration using a laboratory-based biological oxygen demand protocol conducted on soil-water slurries. Active layer depth decreased down the hillslope, while soil moisture, organic matter, and DOC all increased down the hillslope. CDOM absorbance increased downhill, which indicates a decrease in molecular weight of organic compounds at the bottom of the hill. This suggests either an input of newer carbon or processing of high molecular weight DOM down the slope. Soil respiration also increased downhill and was likely driven in part by increased OM in the shallower active layer. Finally, several soil variables were tightly correlated with active layer depth, suggesting that these patterns are driven by changes in the rate of thaw of the active layer driving local soil processes. Clearly, our results suggest significant changes in the form and amount of carbon available for processing and transport along hillslope transects, which may strongly influence the role of terrestrial-aquatic linkage in transport and processing of carbon and other nutrients.

Community structure and succession regulation of fungal consortia in the lignocellulose-degrading process on natural biomass.

PubMed

Tian, Baoyu; Wang, Chunxiang; Lv, Ruirui; Zhou, Junxiong; Li, Xin; Zheng, Yi; Jin, Xiangyu; Wang, Mengli; Ye, Yongxia; Huang, Xinyi; Liu, Ping

2014-01-01

The study aims to investigate fungal community structures and dynamic changes in forest soil lignocellulose-degrading process. rRNA gene clone libraries for the samples collected in different stages of lignocellulose degradation process were constructed and analyzed. A total of 26 representative RFLP types were obtained from original soil clone library, including Mucoromycotina (29.5%), unclassified Zygomycetes (33.5%), Ascomycota (32.4%), and Basidiomycota (4.6%). When soil accumulated with natural lignocellulose, 16 RFLP types were identified from 8-day clone library, including Basidiomycota (62.5%), Ascomycota (36.1%), and Fungi incertae sedis (1.4%). After enrichment for 15 days, identified 11 RFLP types were placed in 3 fungal groups: Basidiomycota (86.9%), Ascomycota (11.5%), and Fungi incertae sedis (1.6%). The results showed richer, more diversity and abundance fungal groups in original forest soil. With the degradation of lignocellulose, fungal groups Mucoromycotina and Ascomycota decreased gradually, and wood-rotting fungi Basidiomycota increased and replaced the opportunist fungi to become predominant group. Most of the fungal clones identified in sample were related to the reported lignocellulose-decomposing strains. Understanding of the microbial community structure and dynamic change during natural lignocellulose-degrading process will provide us with an idea and a basis to construct available commercial lignocellulosic enzymes or microbial complex.

Meteorological measurements. Chapter 3

Treesearch

David Y. Hollinger

2008-01-01

Environmental measurements are useful for detecting climatic trends, understanding how the environment influences biological processes, and as input to ecosystem models. Landscape-scale monitoring requires a suite of environmental measures for all of these purposes, including air and soil temperature, humidity, wind speed, precipitation and soil moisture, and different...

A fluidized bed technique for estimating soil critical shear stress

USDA-ARS?s Scientific Manuscript database

Soil erosion models, depending on how they are formulated, always have erodibilitiy parameters in the erosion equations. For a process-based model like the Water Erosion Prediction Project (WEPP) model, the erodibility parameters include rill and interrill erodibility and critical shear stress. Thes...

Rock Content Influence on Soil Hydraulic Properties

NASA Astrophysics Data System (ADS)

Parajuli, K.; Sadeghi, M.; Jones, S. B.

2015-12-01

Soil hydraulic properties including the soil water retention curve (SWRC) and hydraulic conductivity function are important characteristics of soil affecting a variety of soil properties and processes. The hydraulic properties are commonly measured for seived soils (i.e. particles < 2 mm), but many natural soils include rock fragments of varying size that alter bulk hydraulic properties. Relatively few studies have addressed this important problem using physically-based concepts. Motivated by this knowledge gap, we set out to describe soil hydraulic properties using binary mixtures (i.e. rock fragment inclusions in a soil matrix) based on individual properties of the rock and soil. As a first step of this study, special attention was devoted to the SWRC, where the impact of rock content on the SWRC was quantified using laboratory experiments for six different mixing ratios of soil matrix and rock. The SWRC for each mixture was obtained from water mass and water potential measurements. The resulting data for the studied mixtures yielded a family of SWRC indicating how the SWRC of the mixture is related to that of the individual media, i.e., soil and rock. A consistent model was also developed to describe the hydraulic properties of the mixture as a function of the individual properties of the rock and soil matrix. Key words: Soil hydraulic properties, rock content, binary mixture, experimental data.

Specific features of the development of soils of hydromorphic ecosystems in the northern taiga of Western Siberia under conditions of cryogenesis

NASA Astrophysics Data System (ADS)

Matyshak, G. V.; Bogatyrev, L. G.; Goncharova, O. Yu.; Bobrik, A. A.

2017-10-01

Differently directed and heterochronous cryogenic processes have contributed to the contrasting soil cover patterns and spatial heterogeneity of the properties of soils in hydromorphic ecosystems of the discontinuous permafrost zone of the northern taiga in Western Siberia. Frost heave and permafrost thawing within ecosystems of highmoor bogs have led to the development of specific cryogenic landforms, such as flat-topped and large peat mounds. A set of cryogenic soils is developed in these ecosystems; it includes different variants of cryozems, gleyzems (Cryosols), and peat soils (Histosols). The distribution of these soil types is controlled by the local topography and thawing depth, other factors being insignificant. Alternation of peat horizons of different types and ages, whirl-like patterns of horizon boundaries, considerable variations in the thickness of soil horizons, and inversions of soil horizons under the impact of frost cracking, frost heave, and cryoturbation are typical of the considered soils. Thawing depth is the most significant factor affecting the thickness of organic horizons, the soil pH, and the degree of decomposition of peat. As a result of the upward movement of bog ecosystems under the impact of frost heave, peat soils are subjected to considerable transformation: peat horizons undergo mineralization, and the thickness of organic horizons decreases; in some cases, eluvial-illuvial differentiation of the mineral horizons takes place, and peat podzols are developed. However, the opposite process of the return of the soils to the bog stage of pedogenesis with peat accumulation may take place in any time in the case of activation of thermokarst processes.

Soil cover patterns and SOC dynamics impacts on the soil processes, land management and ecosystem services in Central Region of Russia

NASA Astrophysics Data System (ADS)

Vasenev, Ivan; Chernikov, Vladimir; Yashin, Ivan; Geraskin, Mikhail; Morev, Dmitriy

2014-05-01

In the Central Region of Russia (CRR) the soil cover patterns usually play the very important role in the soil forming and degradation processes (SFP & SDP) potential and current rates, soil organic carbon (SOC) dynamics and pools, greenhouse gases (GHG) emissions and soluble SOC fluxes that we need take into attention for better assessment of the natural and especially man-changed ecosystems' services and for best land-use practices development. Central Region of Russia is the biggest one in RF according to its population and role in the economy. CRR is characterized by high spatial variability of soil cover due to as original landscape heterogeneity as complicated history of land-use practices during last 700 years. Our long-term researches include the wide zonal-provincial set of representative ecosystems and soil cover patterns with different types and history of land-use (forest, meadow-steppe and agricultural ones) from middle-taiga to steppe zones with different level of continentality. The carried out more than 30-years region- and local-scale researches of representative natural and rural landscapes in Tver', Yaroslavl', Kaluga, Moscow, Vladimir, Saransk (Mordovia), Kursk, Orel, Tambov, Voronezh and Saratov oblasts give us the interregional multi-factorial matrix of elementary soil cover patterns (ESCP) with different soil forming and degradation processes rates and soil organic carbon dynamics due to regionally specific soil-geomorphologic features, environmental and dominated microclimate conditions, land-use current practices and history. The validation and ranging of the limiting factors of SFP and SDP develop¬ment, soil carbon dynamics and sequestration potential, ecosystem (agroecosystem) principal services, land functional qualities and agroecological state have been done for dominating and most dynamical components of ESCP regional-typological forms - with application of SOC structure analysis, regional and local GIS, soil spatial patterns detail mapping, traditional regression kriging, correlation tree models and DSS adapted to concrete region and agrolandscape conditions. The outcomes of statistical process modeling show the essential amplification of erosion, dehumification, CO2, CH4 and N2O emission, soluble SOC fluxes, acidification or alkalization, disaggregation and overcompaction processes due to violation of environmentally sound land-use systems and traditional balances of organic matter, nutrients, Ca and Na in agrolandscapes. Due to long-term intensive and out-of-balance land-use practices the most zonal soils and soil cover pattern essentially lost not only their unique natural features (humus horizons depth till 1 m and more in case of Chernozems, 2-6 % of SOC and favorable agrophysical features), but ecosystem services and ecological functions including terrestrial ecosystem carbon balance and the GHG fluxes control. Key-site monitoring results and regional generalized data showed 1-1.5% SOC lost during last 50 years period and active processes of CO2 emission and humus profile eluvial-illuvial redistribution too. A drop of Corg content below threshold "humus limiting content" values (for different soils they vary from 1 to 3-4% of SOC) considerably reduces effectiveness of used fertilizers and possibility of sustai¬nable agronomy here. Forest-steppe Chernozems are usually characterized by higher stability than steppe ones. The ratio between erosive and biological losses in humus supplies can be ten-tatively estimated as fifty-fifty with strong spatial variability due to slope and land-use parameters. These processes have essentially different sets of environmental consequences and ecosystem services that we need to understand in frame of environmental and agroecological problems development prediction.

A multimedia fate and chemical transport modeling system for pesticides: I. Model development and implementation

NASA Astrophysics Data System (ADS)

Li, Rong; Scholtz, M. Trevor; Yang, Fuquan; Sloan, James J.

2011-07-01

We have combined the US EPA MM5/MCIP/SMOKE/CMAQ modeling system with a dynamic soil model, the pesticide emission model (PEM), to create a multimedia chemical transport model capable of describing the important physical and chemical processes involving pesticides in the soil, in the atmosphere, and on the surface of vegetation. These processes include: agricultural practices (e.g. soil tilling and pesticide application mode); advection and diffusion of pesticides, moisture, and heat in the soil; partitioning of pesticides between soil organic carbon and interstitial water and air; emissions from the soil to the atmosphere; gas-particle partitioning and transport in the atmosphere; and atmospheric chemistry and dry and wet deposition of pesticides to terrestrial and water surfaces. The modeling system was tested by simulating toxaphene in a domain that covers most of North America for the period from 1 January 2000 to 31 December 2000. The results show obvious transport of the pesticide from the heavily contaminated soils in the southern United States and Mexico to water bodies including the Atlantic Ocean, the Gulf of Mexico and the Great Lakes, leading to significant dry and wet deposition into these ecosystems. The spatial distributions of dry and wet depositions differ because of their different physical mechanisms; the former follows the distribution of air concentrations whereas the latter is more biased to the North East due to the effect of precipitation.

Rapid fusion method for the determination of Pu, Np, and Am in large soil samples

DOE PAGES

Maxwell, Sherrod L.; Culligan, Brian; Hutchison, Jay B.; ...

2015-02-14

A new rapid sodium hydroxide fusion method for the preparation of 10-20 g soil samples has been developed by the Savannah River National Laboratory (SRNL). The method enables lower detection limits for plutonium, neptunium, and americium in environmental soil samples. The method also significantly reduces sample processing time and acid fume generation compared to traditional soil digestion techniques using hydrofluoric acid. Ten gram soil aliquots can be ashed and fused using the new method in 1-2 hours, completely dissolving samples, including refractory particles. Pu, Np and Am are separated using stacked 2mL cartridges of TEVA and DGA Resin and measuredmore » using alpha spectrometry. The method can be adapted for measurement by inductively-coupled plasma mass spectrometry (ICP-MS). Two 10 g soil aliquots of fused soil may be combined prior to chromatographic separations to further improve detection limits. Total sample preparation time, including chromatographic separations and alpha spectrometry source preparation, is less than 8 hours.« less

Toxic Compounds in Our Food: Arsenic Uptake By Rice and Potential Mitigation By Silicon

NASA Astrophysics Data System (ADS)

Seyfferth, A.; Gill, R.; Penido, E.

2014-12-01

Arsenic is a ubiquitous element in soils worldwide and has the potential to negatively impact human and ecosystem health under certain biogeochemical conditions. While arsenic is relatively immobile in most oxidized soils due to a high affinity for soil solids, arsenic becomes mobilized under reduced soil conditions due to the reductive dissolution of iron(III) oxides thereby releasing soil-bound arsenic. Since arsenic is a well-known carcinogen, this plant-soil process has the potential to negatively impact the lives of billions of rice consumers worldwide upon plant uptake and grain storage of released arsenic. Moreover, arsenic uptake by rice is excacerbated by the use of As-laden groundwater for rice irrigation. One proposed strategy to decrease arsenic uptake by rice plants is via an increase in dissolved silicon in paddy soil solution (pore-water), since silicic acid and arsenous acid share an uptake pathway. However, several soil processes that influence arsenic cycling may be affected by silicon including desorption from bulk soil, formation and mineralogy of iron(III) oxide plaque, and adsorption/desorption onto/from iron plaque; the effect of silicon on these soil processes will ultimately dictate the effectiveness of altered dissolved silicon in decreasing arsenic uptake at the root, which in turn dictates the concentration of arsenic found in grains. Furthermore, the source of silicon may impact carbon cycling and, in particular, methane emissions. Here, impacts of altered dissolved silicon on processes that affect rhizospheric biogeochemical cycling of arsenic and subsequent plant-uptake, and how it influences other biogeochemical cycles such as carbon and iron are investigated. We show that silicon can decrease arsenic uptake and grain storage under certain conditions, and that altered silicon affects the type of iron (III) oxide that comprises iron plaque.

Exploring the Influence of Topography on Belowground C Processes Using a Coupled Hydrologic-Biogeochemical Model

NASA Astrophysics Data System (ADS)

Shi, Y.; Davis, K. J.; Eissenstat, D. M.; Kaye, J. P.; Duffy, C.; Yu, X.; He, Y.

2014-12-01

Belowground carbon processes are affected by soil moisture and soil temperature, but current biogeochemical models are 1-D and cannot resolve topographically driven hill-slope soil moisture patterns, and cannot simulate the nonlinear effects of soil moisture on carbon processes. Coupling spatially-distributed physically-based hydrologic models with biogeochemical models may yield significant improvements in the representation of topographic influence on belowground C processes. We will couple the Flux-PIHM model to the Biome-BGC (BBGC) model. Flux-PIHM is a coupled physically-based land surface hydrologic model, which incorporates a land-surface scheme into the Penn State Integrated Hydrologic Model (PIHM). The land surface scheme is adapted from the Noah land surface model. Because PIHM is capable of simulating lateral water flow and deep groundwater, Flux-PIHM is able to represent the link between groundwater and the surface energy balance, as well as the land surface heterogeneities caused by topography. The coupled Flux-PIHM-BBGC model will be tested at the Susquehanna/Shale Hills critical zone observatory (SSHCZO). The abundant observations, including eddy covariance fluxes, soil moisture, groundwater level, sap flux, stream discharge, litterfall, leaf area index, above ground carbon stock, and soil carbon efflux, make SSHCZO an ideal test bed for the coupled model. In the coupled model, each Flux-PIHM model grid will couple a BBGC cell. Flux-PIHM will provide BBGC with soil moisture and soil temperature information, while BBGC provides Flux-PIHM with leaf area index. Preliminary results show that when Biome- BGC is driven by PIHM simulated soil moisture pattern, the simulated soil carbon is clearly impacted by topography.

DEMONSTRATION BULLETIN: COGNIS TERRAMET LEAD EXTRACTION PROCESS - TWIN CITIES ARMY AMMUNITION PLANT - COGNIS, INC.

EPA Science Inventory

The TERRAMET® soil remediation system leaches and recovers lead (including metallic lead, and lead salts and oxides), and other metals from contaminated soil, sludge, or sediment. The system uses a proprietary aqueous leachant that is optimized through treatability tests for the ...

AUTOMATED RESPIROMETER METHOD FOR MICROBIAL TOXICITY ASSESSMENT OF LOW-LEVEL ZINC CONTAMINATION IN SOIL

EPA Science Inventory

Zinc is an essential trace element for all living organisms including humans. ecause microbial-based toxicity approaches to assess the changes in ecosystem processes are not well defined for soil application, this laboratory has developed an automated respirometer capable of meas...

Microbial, Physical and Chemical Drivers of COS and 18O-CO2 Exchange in Soils

NASA Astrophysics Data System (ADS)

Meredith, L. K.; Boye, K.; Whelan, M.; Pang, E.; von Sperber, C.; Brueggemann, N.; Berry, J. A.; Welander, P. V.

2015-12-01

Carbonyl sulfide (COS) and the oxygen isotope composition (δ18O) of CO2 are potential tools for differentiating the contributions of photosynthesis and respiration to the balance of global carbon cycling. These processes are coupled at the leaf level via the enzyme carbonic anhydrase (CA), which hydrolyzes CO2 in the first biochemical step of the photosynthetic pathway (CO2 + H2O ⇌ HCO3- + H+) and correspondingly structural analogue COS (COS + H2O → CO2 + H2S). CA also accelerates the exchange of oxygen isotopes between CO2 and H2O leading to a distinct isotopic imprint [1]. The biogeochemical cycles of these tracers include significant, yet poorly characterized soil processes that challenge their utility for probing the carbon cycle. In soils, microbial CA also hydrolyze COS and accelerate O isotope exchange between CO2 and soil water. Soils have been observed to emit COS by undetermined processes. To account for these soil processes, measurements are needed to identify the key microbial, chemical, and physical factors. In this study, we survey COS and δ18O exchange in twenty different soils spanning a variety of biomes and soil properties. By comparing COS fluxes and δ18O-CO2 values emitted from moist soils we investigate whether the same types of CA catalyze these two processes. Additionally, we seek to identify the potential chemical drivers of COS emissions by measuring COS fluxes in dry soils. These data are compared with soil physical (bulk density, volumetric water content, texture), chemical (pH, elemental analysis, sulfate, sulfur K-edge XANES), and microbial measurements (biomass and phylogeny). Furthermore, we determine the abundance and diversity of CA-encoding genes to directly link CA with measured soil function. This work will define the best predictors for COS fluxes and δ18O-CO2 values from our suite of biogeochemical measurements. The suitability of identified predictor variables can be tested in follow-up studies and applied for modeling purposes. References: [1] Von Sperber, C., Weiler, M. and Brüggemann, N.: The effect of soil moisture, soil particle size, litter layer and carbonic anhydrase on the oxygen isotopic composition of soil-released CO2, Eur. J. Soil Sci., 66(3), doi:10.1111/ejss.12241, 2015.

Monitoring, analysis and classification of vegetation and soil data collected by a small and lightweight hyperspectral imaging system

NASA Astrophysics Data System (ADS)

Mönnig, Carsten

2014-05-01

The increasing precision of modern farming systems requires a near-real-time monitoring of agricultural crops in order to estimate soil condition, plant health and potential crop yield. For large sized agricultural plots, satellite imagery or aerial surveys can be used at considerable costs and possible time delays of days or even weeks. However, for small to medium sized plots, these monitoring approaches are cost-prohibitive and difficult to assess. Therefore, we propose within the INTERREG IV A-Project SMART INSPECTORS (Smart Aerial Test Rigs with Infrared Spectrometers and Radar), a cost effective, comparably simple approach to support farmers with a small and lightweight hyperspectral imaging system to collect remotely sensed data in spectral bands in between 400 to 1700nm. SMART INSPECTORS includes the whole remote sensing processing chain of small scale remote sensing from sensor construction, data processing and ground truthing for analysis of the results. The sensors are mounted on a remotely controlled (RC) Octocopter, a fixed wing RC airplane as well as on a two-seated Autogyro for larger plots. The high resolution images up to 5cm on the ground include spectra of visible light, near and thermal infrared as well as hyperspectral imagery. The data will be analyzed using remote sensing software and a Geographic Information System (GIS). The soil condition analysis includes soil humidity, temperature and roughness. Furthermore, a radar sensor is envisaged for the detection of geomorphologic, drainage and soil-plant roughness investigation. Plant health control includes drought stress, vegetation health, pest control, growth condition and canopy temperature. Different vegetation and soil indices will help to determine and understand soil conditions and plant traits. Additional investigation might include crop yield estimation of certain crops like apples, strawberries, pasture land, etc. The quality of remotely sensed vegetation data will be tested with ground truthing tools like a spectrometer, visual inspection and ground control panel. The soil condition will also be monitored with a wireless sensor network installed on the examined plots of interest. Provided with this data, a farmer can respond immediately to potential threats with high local precision. In this presentation, preliminary results of hyperspectral images of distinctive vegetation cover and soil on different pasture test plots are shown. After an evaluation period, the whole processing chain will offer farmers a unique, near real- time, low cost solution for small to mid-sized agricultural plots in order to easily assess crop and soil quality and the estimation of harvest. SMART INSPECTORS remotely sensed data will form the basis for an input in a decision support system which aims to detect crop related issues in order to react quickly and efficiently, saving fertilizer, water or pesticides.

DSM for soil erosion risk in Scotland

NASA Astrophysics Data System (ADS)

Poggio, Laura; Gimona, Alessandro; McLeaod, Jim; Castellazzi, Marie; Baggio Compagnucci, Andrea; Irvine, Justin

2017-04-01

Soils play a crucial role in ecosystem functioning, and modelling its risk of degradation is fundamental, especially in the context of climate change. In this work we used continuous 3D soil information derived from digital soil mapping (DSM) approaches to map sediment erosion and deposition patterns due to rainfall. The test area covers the whole of mainland Scotland, excluding the Northern Islands. Soil profiles data were interpolated using a geo-statistical hybrid Generalised Additive Models method for a range of soil properties such as organic matter, texture, soil depth and peat presence. The same method was used to interpolate climatic data and management information. Remote sensing data were integrated in the process and land use data included. Information on grazing (sheep and deer) pressure was taken into account in the modelling. The uncertainty was accounted and propagated across the whole process. The Scottish test case highlights the differences in roles between mineral and organic soils with an assessment adapted to each of them. The results and intermediate steps were compared with available continental scale results. The results show the importance of the use of DSM approaches for modeling soils and ecosystem functions and assessing uncertainty propagation.

Digital soil mapping in assessment of land suitability for organic farming

NASA Astrophysics Data System (ADS)

Ghambashidze, Giorgi; Kentchiashvili, Naira; Tarkhnishvili, Maia; Jolokhava, Tamar; Meskhi, Tea

2017-04-01

Digital soil mapping (DSM) is a fast-developing sub discipline of soil science which gets more importance along with increased availability of spatial data. DSM is based on three main components: the input in the form of field and laboratory observational methods, the process used in terms of spatial and non-spatial soil inference systems, and the output in the form of spatial soil information systems, which includes outputs in the form of rasters of prediction along with the uncertainty of prediction. Georgia is one of the countries who are under the way of spatial data infrastructure development, which includes soil related spatial data also. Therefore, it is important to demonstrate the capacity of DSM technics for planning and decision making process, in which assessment of land suitability is a major interest for those willing to grow agricultural crops. In that term land suitability assessment for establishing organic farms is in high demand as market for organically produced commodities is still increasing. It is the first attempt in Georgia to use DSM to predict areas with potential for organic farming development. Current approach is based on risk assessment of soil pollution with toxic elements (As, Hg, Pb, Cd, Cr) and prediction of bio-availability of those elements to plants on example of the region of Western Georgia, where detailed soil survey was conducted and spatial database of soil was created. The results of the study show the advantages of DSM at early stage assessment and depending on availability and quality of the input data, it can achieve acceptable accuracy.

Soil degradation effect on biological activity in Mediterranean calcareous soils

NASA Astrophysics Data System (ADS)

Roca-Pérez, L.; Alcover-Sáez, S.; Mormeneo, S.; Boluda, R.

2009-04-01

Soil degradation processes include erosion, organic matter decline, compaction, salinization, landslides, contamination, sealing and biodiversity decline. In the Mediterranean region the climatological and lithological conditions, together with relief on the landscape and anthropological activity are responsible for increasing desertification process. It is therefore considered to be extreme importance to be able to measure soil degradation quantitatively. We studied soil characteristics, microbiological and biochemical parameters in different calcareous soil sequences from Valencia Community (Easter Spain), in an attempt to assess the suitability of the parameters measured to reflect the state of soil degradation and the possibility of using the parameters to assess microbiological decline and soil quality. For this purpose, forest, scrubland and agricultural soil in three soil sequences were sampled in different areas. Several sensors of the soil biochemistry and microbiology related with total organic carbon, microbial biomass carbon, soil respiration, microorganism number and enzyme activities were determined. The results show that, except microorganism number, these parameters are good indicators of a soil biological activity and soil quality. The best enzymatic activities to use like indicators were phosphatases, esterases, amino-peptidases. Thus, the enzymes test can be used as indicators of soil degradation when this degradation is related with organic matter losses. There was a statistically significant difference in cumulative O2 uptake and extracellular enzymes among the soils with different degree of degradation. We would like to thank Spanish government-MICINN for funding and support (MICINN, project CGL2006-09776).

Processing plutonium-contaminated soil on Johnston Atoll

DOE Office of Scientific and Technical Information (OSTI.GOV)

Moroney, K.; Moroney, J. III; Turney, J.

1994-07-01

This article describes a cleanup project to process plutonium- and americium-contaminated soil on Johnston Atoll for volume reduction. Thermo Analytical`s (TMA`s) segmented gate system (SGS) for this remedial operation has been in successful on-site operation since 1992. Topics covered include the basis for development, a description of the Johnston Atoll; the significance of results; the benefits of the technology; applicability to other radiologically contaminated sites. 7 figs., 1 tab.

Anaerobic digestion of municipal solid waste: Utility of process residues as a soil amendment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rivard, C.J.; Nagle, N.J.; Kay, B.D.

1995-12-31

Tuna processing wastes (sludges high in fat, oil, and grease [FOG]) and municipal solid waste (MSW) generated on Tutuila Island, American Samoa, represent an ongoing disposal challenge. The biological conversion of the organic fraction of these wastes to useful products, including methane and fertilizer-grade residue, through anaerobic high-solids digestion is currently in scale-up development. The suitability of the anaerobic digestion residues as a soil amendment was evaluated through extensive chemical analysis and greenhouse studies using corn as an indicator crop. Additionally, native Samoan soil was used to evaluate the specific application rates for the compost. Experiments established that anaerobic residuesmore » increase crop yields in direct proportion to increases in the application rate. Additionally, nutrient saturation was not demonstrated within the range of application rates evaluated for the Samoan soil. Beyond nutrient supplementation, organic residue amendment to Samoan soil imparts enhanced water and nutrient-binding capacities.« less

Application of Modular Modeling System to Predict Evaporation, Infiltration, Air Temperature, and Soil Moisture

NASA Technical Reports Server (NTRS)

Boggs, Johnny; Birgan, Latricia J.; Tsegaye, Teferi; Coleman, Tommy; Soman, Vishwas

1997-01-01

Models are used for numerous application including hydrology. The Modular Modeling System (MMS) is one of the few that can simulate a hydrology process. MMS was tested and used to compare infiltration, soil moisture, daily temperature, and potential and actual evaporation for the Elinsboro sandy loam soil and the Mattapex silty loam soil in the Microwave Radiometer Experiment of Soil Moisture Sensing at Beltsville Agriculture Research Test Site in Maryland. An input file for each location was created to nut the model. Graphs were plotted, and it was observed that the model gave a good representation for evaporation for both plots. In comparing the two plots, it was noted that infiltration and soil moisture tend to peak around the same time, temperature peaks in July and August and the peak evaporation was observed on September 15 and July 4 for the Elinsboro Mattapex plot respectively. MMS can be used successfully to predict hydrological processes as long as the proper input parameters are available.

[Recent advance in solidification/stabilization technology for the remediation of heavy metals-contaminated soil].

PubMed

Hao, Han-zhou; Chen, Tong-bin; Jin, Meng-gui; Lei, Mei; Liu, Cheng-wu; Zu, Wen-pu; Huang, Li-mi

2011-03-01

Remediation of heavy metals-contaminated soil is still a difficulty and a hotspot of international research projects. At present, the technologies commonly adopted for the remediation of contaminated sites mainly include excavation, solidification/stabilization (S/S), soil washing, soil vapor extraction (SVE), thermal treatment, and bioremediation. Based on the S/S technical guidelines of Unite State Environmental Protection Agency (EPA) and United Kingdom Environment Agency (EA) and the domestic and foreign patents, this paper introduced the concepts of S/S and its development status at home and abroad, and discussed its future development directions. Solidification refers to a process that binds contaminated media with a reagent, changing the media's physical properties via increasing its compressive strength, decreasing its permeability, and encapsulating the contaminants to form a solid material. Stabilization refers to the process that involves a chemical reaction which reduces the leachability of a waste, chemically immobilizes the waste and reduces its solubility, making the waste become less harmful or less mobile. S/S technology includes cement solidification, lime pozzolanic solidification, plastic materials stabilization, vitrification, and regent-based stabilization. Stabilization (or immobilization) treatment processes convert contaminants to less mobile forms through chemical or thermal interactions. In stabilization technology, the aim of adding agents is to change the soil physical and chemical properties through pH control technology, redox potential technology, precipitation techniques, adsorption technology, and ion-exchange technology that change the existing forms of heavy metals in soil, and thus, reduce the heavy metals bioavailability and mobility. This review also discussed the S/S evaluation methods, highlighted the need to enhance S/S technology in the molecular bonding, soil polymers, and formulation of China's S/S technical guidelines.

Analysis of Rainfall Infiltration Law in Unsaturated Soil Slope

PubMed Central

Zhang, Gui-rong; Qian, Ya-jun; Wang, Zhang-chun; Zhao, Bo

2014-01-01

In the study of unsaturated soil slope stability under rainfall infiltration, it is worth continuing to explore how much rainfall infiltrates into the slope in a rain process, and the amount of rainfall infiltrating into slope is the important factor influencing the stability. Therefore, rainfall infiltration capacity is an important issue of unsaturated seepage analysis for slope. On the basis of previous studies, rainfall infiltration law of unsaturated soil slope is analyzed. Considering the characteristics of slope and rainfall, the key factors affecting rainfall infiltration of slope, including hydraulic properties, water storage capacity (θ s - θ r), soil types, rainfall intensities, and antecedent and subsequent infiltration rates on unsaturated soil slope, are discussed by using theory analysis and numerical simulation technology. Based on critical factors changing, this paper presents three calculation models of rainfall infiltrability for unsaturated slope, including (1) infiltration model considering rainfall intensity; (2) effective rainfall model considering antecedent rainfall; (3) infiltration model considering comprehensive factors. Based on the technology of system response, the relationship of rainfall and infiltration is described, and the prototype of regression model of rainfall infiltration is given, in order to determine the amount of rain penetration during a rain process. PMID:24672332

Analysis of rainfall infiltration law in unsaturated soil slope.

PubMed

Zhang, Gui-rong; Qian, Ya-jun; Wang, Zhang-chun; Zhao, Bo

2014-01-01

In the study of unsaturated soil slope stability under rainfall infiltration, it is worth continuing to explore how much rainfall infiltrates into the slope in a rain process, and the amount of rainfall infiltrating into slope is the important factor influencing the stability. Therefore, rainfall infiltration capacity is an important issue of unsaturated seepage analysis for slope. On the basis of previous studies, rainfall infiltration law of unsaturated soil slope is analyzed. Considering the characteristics of slope and rainfall, the key factors affecting rainfall infiltration of slope, including hydraulic properties, water storage capacity (θs - θr), soil types, rainfall intensities, and antecedent and subsequent infiltration rates on unsaturated soil slope, are discussed by using theory analysis and numerical simulation technology. Based on critical factors changing, this paper presents three calculation models of rainfall infiltrability for unsaturated slope, including (1) infiltration model considering rainfall intensity; (2) effective rainfall model considering antecedent rainfall; (3) infiltration model considering comprehensive factors. Based on the technology of system response, the relationship of rainfall and infiltration is described, and the prototype of regression model of rainfall infiltration is given, in order to determine the amount of rain penetration during a rain process.

Young calcareous soil chronosequences as a model for ecological restoration on alkaline mine tailings.

PubMed

Cross, Adam T; Lambers, Hans

2017-12-31

Tailings are artificial soil-forming substrates that have not been created by the natural processes of soil formation and weathering. The extreme pH environment and corresponding low availability of some macro- and micronutrients in alkaline tailings, coupled with hostile physical and geochemical conditions, present a challenging environment to native biota. Some significant nutritional constraints to ecosystem reconstruction on alkaline tailings include i) predominant or complete absence of combined nitrogen (N) and poor soil N retention; ii) the limited bioavailability of some micronutrients at high soil pH (e.g., Mn, Fe, Zn and Cu); and iii) potentially toxic levels of biologically available soil phosphorus (P) for P-sensitive plants. The short regulatory time frames (years) for mine closure on tailings landforms are at odds with the long time required for natural pedogenic processes to ameliorate these factors (thousands of years). However, there are similarities between the chemical composition and nutrient status of alkaline tailings and the poorly-developed, very young calcareous soils of biodiverse regions such as south-western Australia. We propose that basic knowledge of chronosequences that start with calcareous soils may provide an informative model for understanding the pedogenic processes required to accelerate soil formation on tailings. Development of a functional, stable root zone is crucial to successful ecological restoration on tailings, and three major processes should be facilitated as early as possible during processing or in the early stages of restoration to accelerate soil development on alkaline tailings: i) acidification of the upper tailings profile; ii) establishment of appropriate and resilient microbial communities; and iii) the early development of appropriate pioneer vegetation. Achieving successful ecological restoration outcomes on tailings landforms is likely one of the greatest challenges faced by restoration ecologists and the mining industry, and successful restoration on alkaline tailings likely depends upon careful management of substrate chemical conditions by targeted amendments. Copyright © 2017 Elsevier B.V. All rights reserved.

Spectral mixture modeling: Further analysis of rock and soil types at the Viking Lander sites

NASA Technical Reports Server (NTRS)

Adams, John B.; Smith, Milton O.

1987-01-01

A new image processing technique was applied to Viking Lander multispectral images. Spectral endmembers were defined that included soil, rock and shade. Mixtures of these endmembers were found to account for nearly all the spectral variance in a Viking Lander image.

Development of cropland management dataset to support U.S. SWAT assessments

USDA-ARS?s Scientific Manuscript database

The Soil and Water Assessment Tool (SWAT) is a widely used hydrologic/water quality simulation model in the U.S. Process-based models like SWAT require a great deal of data to accurately represent the natural world, including topography, landuse, soils, weather, and management. With the exception ...

Plant-soil feedbacks and the reversal of desertification with climate change

USDA-ARS?s Scientific Manuscript database

Our objective was to provide a conceptual framework for perennial grass recovery in a series of wet years, which includes both plant-soil feedbacks that increase available water to grasses and effects of precipitation on a sequence of recovery-related processes. We tested hypotheses based on this fr...

Development of a composite soil degradation assessment index for cocoa agroecosystems in southwestern Nigeria

NASA Astrophysics Data System (ADS)

Adenrele Adeniyi, Sunday; de Clercq, Willem Petrus; van Niekerk, Adriaan

2017-08-01

Cocoa agroecosystems are a major land-use type in the tropical rainforest belt of West Africa, reportedly associated with several ecological changes, including soil degradation. This study aims to develop a composite soil degradation assessment index (CSDI) for determining the degradation level of cocoa soils under smallholder agroecosystems of southwestern Nigeria. Plots where natural forests have been converted to cocoa agroecosystems of ages 1-10, 11-40, and 41-80 years, respectively representing young cocoa plantations (YCPs), mature cocoa plantations (MCPs), and senescent cocoa plantations (SCPs), were identified to represent the biological cycle of the cocoa tree. Soil samples were collected at a depth of 0 to 20 cm in each plot and analysed in terms of their physical, chemical, and biological properties. Factor analysis of soil data revealed four major interacting soil degradation processes: decline in soil nutrients, loss of soil organic matter, increase in soil acidity, and the breakdown of soil textural characteristics over time. These processes were represented by eight soil properties (extractable zinc, silt, soil organic matter (SOM), cation exchange capacity (CEC), available phosphorus, total porosity, pH, and clay content). These soil properties were subjected to forward stepwise discriminant analysis (STEPDA), and the result showed that four soil properties (extractable zinc, cation exchange capacity, SOM, and clay content) are the most useful in separating the studied soils into YCP, MCP, and SCP. In this way, we have sufficiently eliminated redundancy in the final selection of soil degradation indicators. Based on these four soil parameters, a CSDI was developed and used to classify selected cocoa soils into three different classes of degradation. The results revealed that 65 % of the selected cocoa farms are moderately degraded, while 18 % have a high degradation status. The numerical value of the CSDI as an objective index of soil degradation under cocoa agroecosystems was statistically validated. The results of this study reveal that soil management should promote activities that help to increase organic matter and reduce Zn deficiency over the cocoa growth cycle. Finally, the newly developed CSDI can provide an early warning of soil degradation processes and help farmers and extension officers to implement rehabilitation practices on degraded cocoa soils.

Combining supercritical fluid extraction of soil herbicides with enzyme immunoassay analysis.

PubMed

Stearman, G K

2001-10-01

Supercritical fluid extraction (SFE) of soil herbicides followed by enzyme immunoassay analysis (EIA) is explained in a step-by-step process. Extracted herbicides, include 2,4-D, simazine, atrazine, and alachlor. The herbicide, trifluralin was not successfully analyzed by EIA because of crossreacting metabolites. Problems with SFE, including uneven packing of cells, leaks, uneven flow and clogging, can largely be eliminated as the method parameters are optimized. It was necessary to add modifiers including methanol or acetone to the SF CO2 to increase the solubility of the analytes. Detection limits of 2.5 ng/g soil for atrazine and alachlor and 15 ng/g soil for simazine and 2,4-D without concentration of the sample were achieved. Recoveries above 80% and relative standard deviations (RSDs) less than 15% for 2,4-D simazine, atrazine and alachlor were achieved. Atrazine and alachlor recoveries were above 90% with RSDs below 10%. Forty soil samples could be extracted and analyzed in an 8-h day.

Soil Metabolome and Metabolic Fate: Microbial Insights into Freshwater Tidal Wetland Redox Biogeochemistry

NASA Astrophysics Data System (ADS)

Roy Chowdhury, T.; Bramer, L.; Hoyt, D. W.; Kim, Y. M.; Metz, T. O.; McCue, L. A.; Jansson, J.; Bailey, V. L.

2017-12-01

Earth System Models predict climate extremes that will impact regional and global hydrology. Aquatic-terrestrial transition zones like wetlands will experience the immediate consequence of climate change as shifts in the magnitude and dynamics of hydrologic flow. Such fluctuating hydrology can alter the structure and function of the soil microbial populations that in turn will alter the nature and rate of biogeochemical transformations and significantly impact the carbon balance of the ecosystem. We tested the impacts of shifting hydrology on the soil microbiome and the role of antecedent moisture condition on redox active microbial processes in soils sampled from a tidal freshwater wetland system in the lower Columbia River, WA, USA. Our objectives were to characterize changes in the soil microbial community composition in response to soil moisture legacy effects, and to elucidate relationships between community response, geochemical signatures and metabolite profiles in this soil. The 16S rRNA gene sequencing showed significant decreases in bacterial abundance capable of anaerobic metabolism in response to drying, but quickly recovered to the antecedent moisture condition, as observed by redox processes. Metabolomics and biogeochemical process rates generated evidence for moisture-driven redox conditions as principal controls on the community and metabolic function. Fluctuating redox conditions altered terminal electron acceptor and donor availability and recovery strengths of these pools in soil such that a disproportionate release of carbon dioxide stemmed from alternative anaerobic degradation processes like sulfate and iron reduction in compared to methanogenesis. Our results show that anoxic conditions impact microbial communities in both permanently and temporarily saturated conditions and that rapid change in hydrology can increase substrate availability for both aerobic and anaerobic decomposition processes, including methanogenesis.

Characterization of spectral responses of dissolved organic matter (DOM) for atrazine binding during the sorption process onto black soil.

PubMed

Wang, Yifan; Zhang, Xinyuan; Zhang, Xing; Meng, Qingjuan; Gao, Fengjie; Zhang, Ying

2017-08-01

This study was aim to investigate the interaction between soil-derived dissolved organic matter (DOM) and atrazine as a kind of pesticides during the sorption process onto black soil. According to the experimental data, the adsorption capacity of Soil + DOM, Soil and DOM were 41.80, 31.45 and 9.35 mg kg -1 , separately, which indicated that DOM significantly enhanced the adsorption efficiency of atrazine by soil. Data implied that the pseudo-second-order kinetic equation could well explain the adsorption process. The adsorption isotherms (R 2  > 0.99) had a satisfactory fit in both Langmuir and Freundlich models. Three-dimensional excitation-emission matrix (3D-EEM), synchronous fluorescence, two-dimensional correlation spectroscopy (2D-COS) and Fourier transform infrared spectroscopy (FT-IR) were selected to analyze the interaction between DOM and atrazine. 3D-EEM showed that humic acid-like substances were the main component of DOM. The fluorescence of DOM samples were gradually quenched with the increased of atrazine concentrations. Synchronous fluorescence spectra showed that static fluorescence quenching was the main quenching process. 2D-COS indicated that the order of the spectral changes were as following: 336 nm > 282 nm. Furthermore, the fluorescence quenching of humic-like fraction occurred earlier than that of protein-like fraction under atrazine surroundings. FT-IR spectra indicated that main compositions of soil DOM include proteins, polysaccharides and humic substances. The findings of this study are significant to reveal DOM played an important role in the environmental fate of pesticides during sorption process onto black soil and also provide more useful information for understanding the interaction between DOM and pesticides by using spectral responses. Copyright © 2017. Published by Elsevier Ltd.

Using NEON Data to Test and Refine Conceptual and Numerical Models of Soil Biogeochemical and Microbial Dynamics

NASA Astrophysics Data System (ADS)

Weintraub, S. R.; Stanish, L.; Ayers, E.

2017-12-01

Recent conceptual and numerical models have proposed new mechanisms that underpin key biogeochemical phenomena, including soil organic matter storage and ecosystem response to nitrogen deposition. These models seek to explicitly capture the ecological links among biota, especially microbes, and their physical and chemical environment to represent belowground pools and fluxes and how they respond to perturbation. While these models put forth exciting new concepts, their broad predictive abilities are unclear as some have been developed and tested against only small or regional datasets. The National Ecological Observatory Network (NEON) presents new opportunities to test and validate these models with multi-site data that span wide climatic, edaphic, and ecological gradients. NEON is measuring surface soil biogeochemical pools and fluxes along with diversity, abundance, and functional potential of soil microbiota at 47 sites distributed across the United States. This includes co-located measurements of soil carbon and nitrogen concentrations and stable isotopes, net nitrogen mineralization and nitrification rates, soil moisture, pH, microbial biomass, and community composition via 16S and ITS rRNA sequencing and shotgun metagenomic analyses. Early NEON data demonstrates that these wide edaphic and climatic gradients are related to changes in microbial community structure and functional potential, as well as element pools and process rates. Going forward, NEON's suite of standardized soil data has the potential to advance our understanding of soil communities and processes by allowing us to test the predictions of new soil biogeochemical frameworks and models. Here, we highlight several recently developed models that are ripe for this kind of data validation, and discuss key insights that may result. Further, we explore synergies with other networks, such as (i)LTER and (i)CZO, which may increase our ability to advance the frontiers of soil biogeochemical modeling.

Adaptive management for soil ecosystem services.

PubMed

Birgé, Hannah E; Bevans, Rebecca A; Allen, Craig R; Angeler, David G; Baer, Sara G; Wall, Diana H

2016-12-01

Ecosystem services provided by soil include regulation of the atmosphere and climate, primary (including agricultural) production, waste processing, decomposition, nutrient conservation, water purification, erosion control, medical resources, pest control, and disease mitigation. The simultaneous production of these multiple services arises from complex interactions among diverse aboveground and belowground communities across multiple scales. When a system is mismanaged, non-linear and persistent losses in ecosystem services can arise. Adaptive management is an approach to management designed to reduce uncertainty as management proceeds. By developing alternative hypotheses, testing these hypotheses and adjusting management in response to outcomes, managers can probe dynamic mechanistic relationships among aboveground and belowground soil system components. In doing so, soil ecosystem services can be preserved and critical ecological thresholds avoided. Here, we present an adaptive management framework designed to reduce uncertainty surrounding the soil system, even when soil ecosystem services production is not the explicit management objective, so that managers can reach their management goals without undermining soil multifunctionality or contributing to an irreversible loss of soil ecosystem services. Copyright © 2016. Published by Elsevier Ltd.

Descriptive and sensitivity analyses of WATBALI: A dynamic soil water model

NASA Technical Reports Server (NTRS)

Hildreth, W. W. (Principal Investigator)

1981-01-01

A soil water computer model that uses the IBM Continuous System Modeling Program III to solve the dynamic equations representing the soil, plant, and atmospheric physical or physiological processes considered is presented and discussed. Using values describing the soil-plant-atmosphere characteristics, the model predicts evaporation, transpiration, drainage, and soil water profile changes from an initial soil water profile and daily meteorological data. The model characteristics and simulations that were performed to determine the nature of the response to controlled variations in the input are described the results of the simulations are included and a change that makes the response of the model more closely represent the observed characteristics of evapotranspiration and profile changes for dry soil conditions is examined.

Aqueous processes at Gusev crater inferred from physical properties of rocks and soils along the Spirit traverse

USGS Publications Warehouse

Cabrol, N.A.; Farmer, J.D.; Grin, E.A.; Ritcher, L.; Soderblom, L.; Li, R.; Herkenhoff, K.; Landis, G.A.; Arvidson, R. E.

2006-01-01

Gusev crater was selected as the landing site for Spirit on the basis of morphological evidence of long-lasting water activity, including possibly fluvial and lacustrine episodes. From the Columbia Memorial Station to the Columbia Hills, Spirit's traverse provides a journey back in time, from relatively recent volcanic plains showing little evidence for aqueous processes up to the older hills, where rock and soil composition are drastically different. For the first 156 sols, the only evidence of water action was weathering rinds, vein fillings, and soil crust cementation by salts. The trenches of Sols 112-145 marked the first significant findings of increased concentrations of sulfur and magnesium varying in parallel, suggesting that they be paired as magnesium-sulfate. Spirit's arrival at West Spur coincided with a shift in rock and soil composition with observations hinting at substantial amounts of water in Gusev's past. We used the Microscopic Imager data up to Sol 431 to analyze rock and soil properties and infer plausible types and magnitude of aqueous processes through time. We show the role played early by topography and structure. The morphology, texture, and deep alteration shown by the rocks in West Spur and the Columbia Hills Formation (CHF) suggest conditions that are not met in present-day Mars and required a wetter environment, which could have included transport of sulfur, chlorine, and bromine in water, vapor in volcanic gases, hydrothermal circulation, or saturation in a briny fluid containing the same elements. Changing conditions that might have affected flow circulation are suggested by different textural and morphological characteristics between the rocks in the CHF and those of the plains, with higher porosity proxy, higher void ratio, and higher water storage potential in the CHF. Soils were used to assess aqueous processes and water pathways in the top layers of modern soils. We conclude that infiltration might have become more difficult with time. Copyright 2006 by the American Geophysical Union.

Quantification of spatial distribution and spread of bacteria in soil at microscale

NASA Astrophysics Data System (ADS)

Juyal, Archana; Eickhorst, Thilo; Falconer, Ruth; Baveye, Philippe; Otten, Wilfred

2015-04-01

Soil bacteria play an essential role in functioning of ecosystems and maintaining of biogeochemical cycles. Soil is a complex heterogeneous environment comprising of highly variable and dynamic micro-habitats that have significant impacts on the growth and activity of resident microbiota including bacteria and fungi. Bacteria occupy a very small portion of available pore space in soil which demonstrates that their spatial arrangement in soil has a huge impact on the contact to their target and on the way they interact to carry out their functions. Due to limitation of techniques, there is scant information on spatial distribution of indigenous or introduced bacteria at microhabitat scale. There is a need to understand the interaction between soil structure and microorganisms including fungi for ecosystem-level processes such as carbon sequestration and improving the predictive models for soil management. In this work, a combination of techniques was used including X-ray CT to characterize the soil structure and in-situ detection via fluorescence microscopy to visualize and quantify bacteria in soil thin sections. Pseudomonas fluorescens bacteria were introduced in sterilized soil of aggregate size 1-2 mm and packed at bulk-densities 1.3 g cm-3 and 1.5 g cm-3. A subset of samples was fixed with paraformaldehyde and subsequently impregnated with resin. DAPI and fluorescence in situ hybridization (FISH) were used to visualize bacteria in thin sections of soil cores by epifluorescence microscopy to enumerate spatial distribution of bacteria in soil. The pore geometry of soil was quantified after X-ray microtomography scanning. The distribution of bacteria introduced locally reduced significantly (P

A review of the impacts of degradation threats on soil properties in the UK.

PubMed

Gregory, A S; Ritz, K; McGrath, S P; Quinton, J N; Goulding, K W T; Jones, R J A; Harris, J A; Bol, R; Wallace, P; Pilgrim, E S; Whitmore, A P

2015-10-01

National governments are becoming increasingly aware of the importance of their soil resources and are shaping strategies accordingly. Implicit in any such strategy is that degradation threats and their potential effect on important soil properties and functions are defined and understood. In this paper, we aimed to review the principal degradation threats on important soil properties in the UK, seeking quantitative data where possible. Soil erosion results in the removal of important topsoil and, with it, nutrients, C and porosity. A decline in soil organic matter principally affects soil biological and microbiological properties, but also impacts on soil physical properties because of the link with soil structure. Soil contamination affects soil chemical properties, affecting nutrient availability and degrading microbial properties, whilst soil compaction degrades the soil pore network. Soil sealing removes the link between the soil and most of the 'spheres', significantly affecting hydrological and microbial functions, and soils on re-developed brownfield sites are typically degraded in most soil properties. Having synthesized the literature on the impact on soil properties, we discuss potential subsequent impacts on the important soil functions, including food and fibre production, storage of water and C, support for biodiversity, and protection of cultural and archaeological heritage. Looking forward, we suggest a twin approach of field-based monitoring supported by controlled laboratory experimentation to improve our mechanistic understanding of soils. This would enable us to better predict future impacts of degradation processes, including climate change, on soil properties and functions so that we may manage soil resources sustainably.

Hydrocyclone/Filter for Concentrating Biomarkers from Soil

NASA Technical Reports Server (NTRS)

Ponce, Adrian; Obenhuber, Donald

2008-01-01

The hydrocyclone-filtration extractor (HFE), now undergoing development, is a simple, robust apparatus for processing large amounts of soil to extract trace amounts of microorganisms, soluble organic compounds, and other biomarkers from soil and to concentrate the extracts in amounts sufficient to enable such traditional assays as cell culturing, deoxyribonucleic acid (DNA) analysis, and isotope analysis. Originally intended for incorporation into a suite of instruments for detecting signs of life on Mars, the HFE could also be used on Earth for similar purposes, including detecting trace amounts of biomarkers or chemical wastes in soils.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Perona, Ralph; Whicker, Jeffrey Jay; Mirenda, Richard J.

This report documents the calculation of Authorized Limits for radionuclides in soil to be used in the transfer of property by the Los Alamos National Laboratory (LANL). The Authorized Limits support the evaluation process to clear land for release under different uses even though the soil contains small residual amounts of radioactivity. The Authorized Limits are developed for four exposure scenarios: residential, commercial/industrial, construction worker, and recreational. Exposure to radionuclides in soil under these scenarios is assessed for exposure routes that include incidental ingestion of soil; inhalation of soil particulates; ingestion of homegrown produce (residential only); and external irradiation frommore » soil. Inhalation and dermal absorption of tritiated water vapor in air are also assessed.« less

Utilization of ERTS data to detect plant diseases and nutrient deficiencies, soil types and moisture levels

NASA Technical Reports Server (NTRS)

Parks, W. L.; Sewell, J. I. (Principal Investigator); Hilty, J. W.; Rennie, J. C.

1972-01-01

The author has identified the following significant results. A significant finding is the identification and delineation of a large soil association in Obion County, West Tennessee. These data are now being processed through the scanner and computer and will be included in the next report along with pictures of printout and imagery. Channel 7 appears to provide the most useful imagery related to soil differences. Soil types have been identified through the use of aircraft imagery. However, a soil association map appears to be the best that space imagery will provide. The exception to this will be large areas of a uniform soil type as occurs in the great plains.

Soil Penetration by Earthworms and Plant Roots—Mechanical Energetics of Bioturbation of Compacted Soils

PubMed Central

2015-01-01

We quantify mechanical processes common to soil penetration by earthworms and growing plant roots, including the energetic requirements for soil plastic displacement. The basic mechanical model considers cavity expansion into a plastic wet soil involving wedging by root tips or earthworms via cone-like penetration followed by cavity expansion due to pressurized earthworm hydroskeleton or root radial growth. The mechanical stresses and resulting soil strains determine the mechanical energy required for bioturbation under different soil hydro-mechanical conditions for a realistic range of root/earthworm geometries. Modeling results suggest that higher soil water content and reduced clay content reduce the strain energy required for soil penetration. The critical earthworm or root pressure increases with increased diameter of root or earthworm, however, results are insensitive to the cone apex (shape of the tip). The invested mechanical energy per unit length increase with increasing earthworm and plant root diameters, whereas mechanical energy per unit of displaced soil volume decreases with larger diameters. The study provides a quantitative framework for estimating energy requirements for soil penetration work done by earthworms and plant roots, and delineates intrinsic and external mechanical limits for bioturbation processes. Estimated energy requirements for earthworm biopore networks are linked to consumption of soil organic matter and suggest that earthworm populations are likely to consume a significant fraction of ecosystem net primary production to sustain their subterranean activities. PMID:26087130

Differential effect of biochar upon reduction-induced mobility and bioavailability of arsenate and chromate.

PubMed

Choppala, Girish; Bolan, Nanthi; Kunhikrishnan, Anitha; Bush, Richard

2016-02-01

Heavy metals such as chromium (Cr) and arsenic (As) occur in ionic form in soil, with chromate [Cr(VI)] and arsenate As(V) being the most pre-dominant forms. The application of biochar to Cr(VI) and As(V) spiked and field contaminated soils was evaluated on the reduction processes [(Cr(VI) to Cr(III)] and [As(V) to As(III))], and subsequent mobility and bioavailability of both As(V) and Cr(VI). The assays used in this study included leaching, soil microbial activity and XPS techniques. The reduction rate of As(V) was lower than that of Cr(VI) with and without biochar addition, however, supplementation with biochar enhanced the reduction process of As(V). Leaching experiments indicated Cr(VI) was more mobile than As(V). Addition of biochar reversed the effect by reducing the mobility of Cr and increasing that of As. The presence of Cr and As in both spiked and contaminated soils reduced microbial activity, but with the addition of biochar to these soils, the microbial activity increased in the Cr(VI) contaminated soils, while it was further decreased with As(V) contaminated soils. The addition of biochar was effective in mitigating Cr toxicity by reducing Cr(VI) to Cr(III). In contrast, the conversion process of As(V) to As(III) hastened by biochar was not favourable, as As(III) is more toxic in soils. Overall, the presence of functional groups on biochar promotes reduction by providing the electrons required for reduction processes to occur as determined by XPS data. Copyright © 2015 Elsevier Ltd. All rights reserved.

Effects of lead mineralogy on soil washing enhanced by ferric salts as extracting and oxidizing agents.

PubMed

Yoo, Jong-Chan; Park, Sang-Min; Yoon, Geun-Seok; Tsang, Daniel C W; Baek, Kitae

2017-10-01

In this study, we evaluated the feasibility of using ferric salts including FeCl 3 and Fe(NO 3 ) 3 as extracting and oxidizing agents for a soil washing process to remediate Pb-contaminated soils. We treated various Pb minerals including PbO, PbCO 3 , Pb 3 (CO 3 ) 2 (OH) 2 , PbSO 4 , PbS, and Pb 5 (PO 4 ) 3 (OH) using ferric salts, and compared our results with those obtained using common washing agents of HCl, HNO 3 , disodium-ethylenediaminetetra-acetic acid (Na 2 -EDTA), and citric acid. The use of 50 mM Fe(NO 3 ) 3 extracted significantly more Pb (above 96% extraction) from Pb minerals except PbSO 4 (below 55% extraction) compared to the other washing agents. In contrast, washing processes using FeCl 3 and HCl were not effective for extraction from Pb minerals because of PbCl 2 precipitation. Yet, the newly formed PbCl 2 could be dissolved by subsequent wash with distilled water under acidic conditions. When applying our washing method to remediate field-contaminated soil from a shooting range that had high concentrations of Pb 3 (CO 3 ) 2 (OH) 2 and PbCO 3 , we extracted more Pb (approximately 99% extraction) from the soil using 100 mM Fe(NO 3 ) 3 than other washing agents at the same process conditions. Our results show that ferric salts can be alternative washing agents for Pb-contaminated soils in view of their extracting and oxidizing abilities. Copyright © 2017 Elsevier Ltd. All rights reserved.

Using a spatially-distributed hydrologic biogeochemistry model to study the spatial variation of carbon processes in a Critical Zone Observatory

NASA Astrophysics Data System (ADS)

Shi, Y.; Eissenstat, D. M.; Davis, K. J.; He, Y.

2015-12-01

Forest carbon processes are affected by soil moisture, soil temperature and solar radiation. Most of the current biogeochemical models are 1-D and represent one point in space. Therefore they can neither resolve topographically driven hill-slope soil moisture patterns, nor simulate the nonlinear effects of soil moisture on carbon processes. A spatially-distributed biogeochemistry model, Flux-PIHM-BGC, has been developed by coupling the Biome-BGC (BBGC) model with a coupled physically-based land surface hydrologic model, Flux-PIHM. Flux-PIHM incorporates a land-surface scheme (adapted from the Noah land surface model) into the Penn State Integrated Hydrologic Model (PIHM). Because PIHM is capable of simulating lateral water flow and deep groundwater, Flux-PIHM is able to represent the link between groundwater and the surface energy balance, as well as the land surface heterogeneities caused by topography. Flux-PIHM-BGC model was tested at the Susquehanna/Shale Hills critical zone observatory (SSHCZO). The abundant observations at the SSHCZO, including eddy covariance fluxes, soil moisture, groundwater level, sap flux, stream discharge, litterfall, leaf area index, aboveground carbon stock, and soil carbon efflux, provided an ideal test bed for the coupled model. Model results show that when uniform solar radiation is used, vegetation carbon and soil carbon are positively correlated with soil moisture in space, which agrees with the observations within the watershed. When topographically-driven solar radiation is used, however, the wetter valley floor becomes radiation limited, and produces less vegetation and soil carbon than the drier hillslope due to the assumption that canopy height is uniform in the watershed. This contradicts with the observations, and suggests that a tree height model with dynamic allocation model are needed to reproduce the spatial variation of carbon processes within a watershed.

Black soiling of an architectural limestone during two-year term exposure to urban air in the city of Granada (S Spain).

PubMed

Urosevic, Maja; Yebra-Rodríguez, Africa; Sebastián-Pardo, Eduardo; Cardell, Carolina

2012-01-01

A two-year term aging test was carried out on a building limestone under different urban conditions in the city of Granada (Southern Spain) to assess its Cultural Heritage sustainability. For this purpose stone tablets were placed vertically at four sites with contrasting local pollution micro-environments and exposure conditions (rain-sheltered and unsheltered). The back (rain-sheltered) and the front (rain-unsheltered) faces of the stone tablets were studied for each site. The soiling process (surface blackening) was monitored through lightness (ΔL*) and chroma changes (ΔC*). Additionally atmospheric particles deposited on the stone surfaces and on PM10 filters during the exposure time were studied through a multianalytical approach including scanning electron microscopy (SEM-EDX), transmission electron microscopy (TEM) and micro-Raman spectroscopy. The identified atmospheric particles (responsible for stone soiling) were mainly soot and soil dust particles; also fly ash and aged salt particles were found. The soiling process was related to surface texture, exposure conditions and proximity to dense traffic streets. On the front faces of all stones, black soiling and surface roughness promoted by differential erosion between micritic and sparitic calcite were noticed. Moreover, it was found that surface roughness enhanced a feedback process that triggers further black soiling. The calculated effective area coverage (EAC) by light absorbing dust ranged from 10.2 to 20.4%, exceeding by far the established value of 2% EAC (limit perceptible to the human eye). Soiling coefficients (SC) were estimated based on square-root and bounded exponential fittings. Estimated black carbon (BC) concentration resulted in relatively similar SC for all studied sites and thus predicts the soiling process better than using particulate matter (PM10) concentration. Copyright © 2011 Elsevier B.V. All rights reserved.

Mechanisms control the soil organic carbon loss with grassland degradation in the Qinghai-Tibet Plateau

NASA Astrophysics Data System (ADS)

Peng, Fei; Xian, Xue; You, Quangang; Huang, Cuihua; Dong, Siyang; Liao, Jie; Duan, Hanchen; Wang, Tao

2017-04-01

Grassland in the Qinghai-Tibet Plateau (QTP) provides tremendous carbon (C) sinks and is the important ground for grazing. Grassland degradation, the loss of plant coverage and the emergence of sand activities, results in substantial reduction in soil organic carbon (SOC). To demonstrate the specific degradation pattern of SOC and elucidate underlying mechanisms, a sequence of five degradation stages over the whole grassland in the QTP were investigated. The survey and laboratory data were analyzed by three structural equation modeling (SEM) analysis. One of the analysis focused on the biological processes while the other two included both the biological and physical processes. Soil temperature had no significant change but soil moisture decreased in all layers. The above and the below-ground plant production decreased and the dominant plant functional group shifted from sedge and grass to forbs. The SOC concentration declined about 40-50% in the very severely degraded comparing with intact alpine grassland.All the three models were successfully fitted with R2 about 0.50. Three biological processes can explain the SOC change. The decrease in soil moisture suppressed C output through soil respiration (Rs) thus lower the SOC loss with land degradation. Decline in the plant production due to a decrease in coverage or to the change in relative abundance of sedge, forbs and grass directly or indirectly reduce the C input and finally lead to the 40-50% loss in SOC. The significant pathways from soil microclimate and soil properties to SOC in the black box model, only one significant pathway from soil properties to SOC indicate that physical processes like the wind and water erosion might control the SOC loss with land degradation in the alpine grassland in the QTP.

Modelling the effect of low soil temperatures on transpiration by Scots pine

NASA Astrophysics Data System (ADS)

Mellander, Per-Erik; Stähli, Manfred; Gustafsson, David; Bishop, Kevin

2006-06-01

For ecosystem modelling of the Boreal forest it is important to include processes associated with low soil temperature during spring-early summer, as these affect the tree water uptake. The COUP model, a physically based SVAT model, was tested with 2 years of soil and snow physical measurements and sap flow measurements in a 70-year-old Scots pine stand in the boreal zone of northern Sweden. During the first year the extent and duration of soil frost was manipulated in the field. The model was successful in reproducing the timing of the soil warming after the snowmelt and frost thaw. A delayed soil warming, into the growing season, severely reduced the transpiration. We demonstrated the potential for considerable overestimation of transpiration by the model if the reduction of the trees' capacity to transpire due to low soil temperatures is not taken into account. We also demonstrated that the accumulated effect of aboveground conditions could be included when simulating the relationship between soil temperature and tree water uptake. This improved the estimated transpiration for the control plot and when soil warming was delayed into the growing season. The study illustrates the need of including antecedent conditions on root growth in the model in order to catch these effects on transpiration. The COUP model is a promising tool for predicting transpiration in high-latitude stands.

Current advancements and challenges in soil-root interactions modelling

NASA Astrophysics Data System (ADS)

Schnepf, Andrea; Huber, Katrin; Abesha, Betiglu; Meunier, Felicien; Leitner, Daniel; Roose, Tiina; Javaux, Mathieu; Vanderborght, Jan; Vereecken, Harry

2015-04-01

Roots change their surrounding soil chemically, physically and biologically. This includes changes in soil moisture and solute concentration, the exudation of organic substances into the rhizosphere, increased growth of soil microorganisms, or changes in soil structure. The fate of water and solutes in the root zone is highly determined by these root-soil interactions. Mathematical models of soil-root systems in combination with non-invasive techniques able to characterize root systems are a promising tool to understand and predict the behaviour of water and solutes in the root zone. With respect to different fields of applications, predictive mathematical models can contribute to the solution of optimal control problems in plant recourse efficiency. This may result in significant gains in productivity, efficiency and environmental sustainability in various land use activities. Major challenges include the coupling of model parameters of the relevant processes with the surrounding environment such as temperature, nutrient concentration or soil water content. A further challenge is the mathematical description of the different spatial and temporal scales involved. This includes in particular the branched structures formed by root systems or the external mycelium of mycorrhizal fungi. Here, reducing complexity as well as bridging between spatial scales is required. Furthermore, the combination of experimental and mathematical techniques may advance the field enormously. Here, the use of root system, soil and rhizosphere models is presented through a number of modelling case studies, including image based modelling of phosphate uptake by a root with hairs, model-based optimization of root architecture for phosphate uptake from soil, upscaling of rhizosphere models, modelling root growth in structured soil, and the effect of root hydraulic architecture on plant water uptake efficiency and drought resistance.

Current Advancements and Challenges in Soil-Root Interactions Modelling

NASA Astrophysics Data System (ADS)

Schnepf, A.; Huber, K.; Abesha, B.; Meunier, F.; Leitner, D.; Roose, T.; Javaux, M.; Vanderborght, J.; Vereecken, H.

2014-12-01

Roots change their surrounding soil chemically, physically and biologically. This includes changes in soil moisture and solute concentration, the exudation of organic substances into the rhizosphere, increased growth of soil microorganisms, or changes in soil structure. The fate of water and solutes in the root zone is highly determined by these root-soil interactions. Mathematical models of soil-root systems in combination with non-invasive techniques able to characterize root systems are a promising tool to understand and predict the behaviour of water and solutes in the root zone. With respect to different fields of applications, predictive mathematical models can contribute to the solution of optimal control problems in plant recourse efficiency. This may result in significant gains in productivity, efficiency and environmental sustainability in various land use activities. Major challenges include the coupling of model parameters of the relevant processes with the surrounding environment such as temperature, nutrient concentration or soil water content. A further challenge is the mathematical description of the different spatial and temporal scales involved. This includes in particular the branched structures formed by root systems or the external mycelium of mycorrhizal fungi. Here, reducing complexity as well as bridging between spatial scales is required. Furthermore, the combination of experimental and mathematical techniques may advance the field enormously. Here, the use of root system, soil and rhizosphere models is presented through a number of modelling case studies, including image based modelling of phosphate uptake by a root with hairs, model-based optimization of root architecture for phosphate uptake from soil, upscaling of rhizosphere models, modelling root growth in structured soil, and the effect of root hydraulic architecture on plant water uptake efficiency and drought resistance.

Designing sustainable soils in Earth's critical zone

NASA Astrophysics Data System (ADS)

Banwart, Steven Allan; de Souza, Danielle Maia; Menon, Manoj; Nikolaidis, Nikolaos; Panagos, Panos; Vala Ragnardsdottir, Kristin; Rousseva, Svelta; van Gaans, Pauline

2014-05-01

The demographic drivers of increasing human population and wealth are creating tremendous environmental pressures from growing intensity of land use, resulting in soil and land degradation worldwide. Environmental services are provided through multiple soil functions that include biomass production, water storage and transmission, nutrient transformations, contaminant attenuation, carbon and nitrogen storage, providing habitat and maintaining the genetic diversity of the land environment. One of the greatest challenges of the 21st century is to identify key risks to soil, and to design mitigation strategies to manage these risks and to enhance soil functions that can last into the future. The scientific study of Earth's Critical Zone (CZ), the thin surface layer that extends vertically from the top of the tree canopy to the bottom of aquifers, provides an essential integrating scientific framework to study, protect and enhance soil functions. The research hypothesis is that soil structure, the geometric architecture of solids, pores and biomass, is a critical indicator and essential factor of productive soil functions. The experimental design selects a network of Critical Zone Observatories (CZOs) as advanced field research sites along a gradient of land use intensity in order to quantify soil structure and soil processes that dictate the flows and transformations of material and energy as soil functions. The CZOs focus multidisciplinary expertise on soil processes, field observation and data interpretation, management science and ecological economics. Computational simulation of biophysical processes provides a quantitative method of integration for the range of theory and observations that are required to quantify the linkages between changes in soil structure and soil functions. Key results demonstrate that changes in soil structure can be quantified through the inputs of organic carbon and nitrogen from plant productivity and microbial activity, coupled with particle aggregation dynamics and organic matter mineralization. Simulation results show that soil structure is highly dynamic and is sensitive to organic matter production and minearlisation rates as influenced by vegetation, tillage and organic carbon amendments. These results point to a step-change in the capability to design soil management and land use through computational simulation. This approach of "sustainability by design" describes the mechanistic process linkages that exist between the above-ground inputs to the CZ and the internal processes that produce soil functions. This approach provides a rational, scientific approach to selecting points of intervention with the CZ in order to design methods to mitigate soil threats and to enhance and sustain vital soil functions. Furthermore, this approach provides a successful pilot study to the use of international networks of CZOs as a planetary-scale laboratory to test the response of CZ process rates along gradients of global environmental change - and to test adaptation strategies to manage the risks arising from the CZ impacts. Acknowledgements. The authors acknowledge the substantial contributions of the entire team of investigators and funding of the SoilTrEC project (EC FP7, agreement no. 244118; www.soiltrec.eu).

Spatial Distribution of Fungal Communities in an Arable Soil

PubMed Central

Moll, Julia; Hoppe, Björn; König, Stephan; Wubet, Tesfaye; Buscot, François; Krüger, Dirk

2016-01-01

Fungi are prominent drivers of ecological processes in soils, so that fungal communities across different soil ecosystems have been well investigated. However, for arable soils taxonomically resolved fine-scale studies including vertical itemization of fungal communities are still missing. Here, we combined a cloning/Sanger sequencing approach of the ITS/LSU region as marker for general fungi and of the partial SSU region for arbuscular mycorrhizal fungi (AMF) to characterize the microbiome in different maize soil habitats. Four compartments were analyzed over two annual cycles 2009 and 2010: a) ploughed soil in 0–10 cm, b) rooted soil in 40–50 cm, c) root-free soil in 60–70 cm soil depth and d) maize roots. Ascomycota was the most dominant phylum across all compartments. Fungal communities including yeasts and AMF differed strongly between compartments. Inter alia, Tetracladium, the overall largest MOTU (molecular operational taxonomic unit), occurred in all compartments, whereas Trichosporon dominated all soil compartments. Sequences belonging to unclassified Helotiales were forming the most abundant MOTUs exclusively present in roots. This study gives new insights on spatial distribution of fungi and helps to link fungal communities to specific ecological properties such as varying resources, which characterize particular niches of the heterogeneous soil environment. PMID:26840453

Can Microbial Ecology and Mycorrhizal Functioning Inform Climate Change Models?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hofmockel, Kirsten; Hobbie, Erik

Our funded research focused on soil organic matter dynamics and plant-microbe interactions by examining the role of belowground processes and mechanisms across scales, including decomposition of organic molecules, microbial interactions, and plant-microbe interactions associated with a changing climate. Research foci included mycorrhizal mediated priming of soil carbon turnover, organic N use and depolymerization by free-living microbes and mycorrhizal fungi, and the use of isotopes as additional constraints for improved modeling of belowground processes. This work complemented the DOE’s mandate to understand both the consequences of atmospheric and climatic change for key ecosystems and the feedbacks on C cycling.

The Metaproteome of "Park Grass" soil - a reference for EU soil science

NASA Astrophysics Data System (ADS)

Quinn, Gerry; Dudley, Ed; Doerr, Stefan; Matthews, Peter; Halen, Ingrid; Walley, Richard; Ashton, Rhys; Delmont, Tom; Francis, Lewis; Gazze, Salvatore Andrea; Van Keulen, Geertje

2016-04-01

Soil metaproteomics, the systemic extraction and identification of proteins from a soil, is key to understanding the biological and physical processes that occur within the soil at a molecular level. Until recently, direct extraction of proteins from complex soils have yielded only dozens of protein identifications due to interfering substances, such as humic acids and clay, which co-extract and/or strongly adsorb protein, often causing problems in downstream processing, e.g. mass spectrometry. Furthermore, the current most successful, direct, proteomic extraction protocol favours larger molecular weight and/or heat-stable proteins due to its extraction protocol. We have now developed a novel, faster, direct soil protein extraction protocol which also addressed the problem of interfering substances, while only requiring less than 1 gram of material per extraction. We extracted protein from the 'Genomic Observatory' Park Grass at Rothamsted Research (UK), an ideally suited geographic site as it is the longest (>150 years) continually studied experiment on ungrazed permanent grassland in the world, for which a rich history of environmental/ecological data has been collected, including high quality publically available metagenome DNA sequences. Using this improved methodology, in conjunction with the creation of high quality, curated metagenomic sequence databases, we have been able to significantly improve protein identifications from one soil due to extracting a similar number of proteins that were >90% different when compared to the best current direct protocol. This optimised metaproteomics protocol has now enabled identification of thousands of proteins from one soil, leading therefore to a deeper insight of soil system processes at the molecular scale.

Arctic mosses govern below-ground environment and ecosystem processes.

PubMed

Gornall, J L; Jónsdóttir, I S; Woodin, S J; Van der Wal, R

2007-10-01

Mosses dominate many northern ecosystems and their presence is integral to soil thermal and hydrological regimes which, in turn, dictate important ecological processes. Drivers, such as climate change and increasing herbivore pressure, affect the moss layer thus, assessment of the functional role of mosses in determining soil characteristics is essential. Field manipulations conducted in high arctic Spitsbergen (78 degrees N), creating shallow (3 cm), intermediate (6 cm) and deep (12 cm) moss layers over the soil surface, had an immediate impact on soil temperature in terms of both average temperatures and amplitude of fluctuations. In soil under deep moss, temperature was substantially lower and organic layer thaw occurred 4 weeks later than in other treatment plots; the growing season for vascular plants was thereby reduced by 40%. Soil moisture was also reduced under deep moss, reflecting the influence of local heterogeneity in moss depth, over and above the landscape-scale topographic control of soil moisture. Data from field and laboratory experiments show that moss-mediated effects on the soil environment influenced microbial biomass and activity, resulting in warmer and wetter soil under thinner moss layers containing more plant-available nitrogen. In arctic ecosystems, which are limited by soil temperature, growing season length and nutrient availability, spatial and temporal variation in the depth of the moss layer has significant repercussions for ecosystem function. Evidence from our mesic tundra site shows that any disturbance causing reduction in the depth of the moss layer will alleviate temperature and moisture constraints and therefore profoundly influence a wide range of ecosystem processes, including nutrient cycling and energy transfer.

Calcic soils and calcretes in the southwestern United States

USGS Publications Warehouse

Bachman, George Odell; Machette, Michael N.

1977-01-01

Secondary calcium carbonate of diverse origins, 'caliche' of many authors, is widespread in the southwestern United States. 'Caliche' includes various carbonates such as calcic soils and products of groundwater cementation. The term 'caliche' is generally avoided in this report in favor of such terms as calcrete, calcic soils, and pervasively cemented deposits. Criteria for the recognition of various types of calcrete of diverse origins include field relations and laboratory data. Calcic soils provide a comprehensive set of characteristics that aid in their recognition in the field. These characteristics include a distinctive morphology that is zoned horizontally and can frequently be traced over tens to hundreds of square kilometers. The major process in the formation of pedogenic calcrete and calic soils is the leaching of calcium carbonate from upper soil horizons by downward percolating soil solutions and reprecipitation of the carbonate in alluvial horizons near the base of the soil profile. The formation of pedogenic calcrete involves many factors including climate, source of carbonate, and tectonic stability of the geomorphic surface on which the calcrete is deposited. Most of the carbonate in pedogenic calcrete is probably derived from windblown sand, dust, and rain. Calcic soils and pedogenic calcretes follow a six-stage sequence morphologic development and is based on a classification devised by Gile, Peterson and Grossman in 1966. The .six morphologic stages of carbonate deposition in soils are related to the relative age of the soil and are as follows: I. The first or youngest stage includes filamentous or faint coatings of carbonate on detrital grains. II. The second stage includes pebble coatings which are continuous; firm carbonate nodules are few to common. III. The third stage includes coalesced nodules which occur in a friable or disseminated carbonate matrix. IV. The fourth stage includes platy, firmly cemented matrix which engulfs nodules; horizon is plugged to downward moving solutions. V. The fifth stage includes soils which are platy to tabular, dense, strongly cemented. A well-developed laminar layer occurs on the upper surface. VI. The sixth and most advanced stage is massive, multilaminar, and strongly cemented calcrete with abundant pisoliths, the upper surface of which may be brecciated. Pisoliths may indicate many generations of brecciation and reformation. In general calcic soils include stages I through III and are friable to moderately indurated; whereas pedogenic calcretes include stages IV through VI and are dense and strongly indurated. In a single pedon the morphologic stage of carbonate deposition decreases downward in the profile. The stage of development may be used in local regions for correlation and determination of relative ages of soils and geomorphic surfaces. Some structures observed in pedogenic calcretes may be present in other types of calcrete but the horizontal zonation typical of deposits of soil processes is absent. Laminar structure in particular is not restricted to pedogenic deposits and is common in many varieties of calcrete. Very little chemical change occurs in the noncalcareous nonclayey fractions of calcretes with age; but clay minerals within calcretes undergo a complex history of authigenesis. There is a depletion of magnesium in the calcareous portion and an enrichment of magnesium in the clayey portion of a calcrete with age. In keeping with this relationship, montmorillonite, or mixed layer montmorillonite-illite, is common in younger calcretes; whereas the high magnesium-silicate clays, sepiolite and palygorskite, are common in older calcretes. This indicates that the magnesium depleted from the carbonate is redistributed authigenically in clay minerals. The mobility of carbonate introduces many problems in attempts to date calcretes directly. Although the relative ages of soils within a province may be determined by quant

Soil organic carbon dynamics jointly controlled by climate, carbon inputs, soil properties and soil carbon fractions.

PubMed

Luo, Zhongkui; Feng, Wenting; Luo, Yiqi; Baldock, Jeff; Wang, Enli

2017-10-01

Soil organic carbon (SOC) dynamics are regulated by the complex interplay of climatic, edaphic and biotic conditions. However, the interrelation of SOC and these drivers and their potential connection networks are rarely assessed quantitatively. Using observations of SOC dynamics with detailed soil properties from 90 field trials at 28 sites under different agroecosystems across the Australian cropping regions, we investigated the direct and indirect effects of climate, soil properties, carbon (C) inputs and soil C pools (a total of 17 variables) on SOC change rate (r C , Mg C ha -1  yr -1 ). Among these variables, we found that the most influential variables on r C were the average C input amount and annual precipitation, and the total SOC stock at the beginning of the trials. Overall, C inputs (including C input amount and pasture frequency in the crop rotation system) accounted for 27% of the relative influence on r C , followed by climate 25% (including precipitation and temperature), soil C pools 24% (including pool size and composition) and soil properties (such as cation exchange capacity, clay content, bulk density) 24%. Path analysis identified a network of intercorrelations of climate, soil properties, C inputs and soil C pools in determining r C . The direct correlation of r C with climate was significantly weakened if removing the effects of soil properties and C pools, and vice versa. These results reveal the relative importance of climate, soil properties, C inputs and C pools and their complex interconnections in regulating SOC dynamics. Ignorance of the impact of changes in soil properties, C pool composition and C input (quantity and quality) on SOC dynamics is likely one of the main sources of uncertainty in SOC predictions from the process-based SOC models. © 2017 John Wiley & Sons Ltd.

Chemical equilibria model of strontium-90 adsorption and transport in soil in response to dynamic alkaline conditions.

PubMed

Spalding, B P; Spalding, I R

2001-01-15

Strontium-90 is a major hazardous contaminant of radioactive wastewater and its processing sludges at many Department of Energy (DOE) facilities. In the past, such contaminated wastewater and sludge have been disposed in soil seepage pits, lagoons, or cribs often under highly perturbed alkaline conditions (pH > 12) where 90Sr solubility is low and its adsorption to surrounding soil is high. As natural weathering returns these soils to near-neutral or slightly acidic conditions, the adsorbed and precipitated calcium and magnesium phases, in which 90Sr is carried, change significantly in both nature and amounts. No comprehensive computational method has been formulated previously to quantitatively simulate the dynamics of 90Sr in the soil-groundwater environment under such dynamic and wide-ranging conditions. A computational code, the Hydrologic Utility Model for Demonstrating Integrated Nuclear Geochemical Environmental Responses (HUMDINGER), was composed to describe the changing equilibria of 90Sr in soil based on its causative chemical reactions including soil buffering, pH-dependent cation-exchange capacity, cation selectivity, and the precipitation/dissolution of calcium carbonate, calcium hydroxide, and magnesium hydroxide in response to leaching groundwater characteristics including pH, acid-neutralizing capacity, dissolved cations, and inorganic carbonate species. The code includes a simulation of one-dimensional transport of 90Sr through a soil column as a series of soil mixing cells where the equilibrium soluble output from one cell is applied to the next cell. Unamended soil leaching and highly alkaline soil treatments, including potassium hydroxide, sodium silicate, and sodium aluminate, were simulated and compared with experimental findings using large (10 kg) soil columns that were leached with 90Sr-contaminated groundwater after treatment. HUMDINGER's simulations were in good agreement with dynamic experimental observations of soil exchange capacity, exchangeable cations, total 90Sr, and pH values of layers within the soil columns and of column effluents.

Protecting global soil resources for future generations

NASA Astrophysics Data System (ADS)

Montanarella, Luca

2017-04-01

The latest Status of World's Soil Resources report has highlighted that soils are increasingly under pressure by numerous human induced degradation processes in most parts of the world. The limits of our planetary boundaries concerning vital soil resources have been reached and without reversing this negative trend there will be a serious lack of necessary soil resources for future generations. It has been therefore of the highest importance to include soils within some of the Sustainable Development Goals (SDG) recently approved by the United Nations. Sustainable development can not be achieved without protecting the limited, non-renewable, soil resources of our planet. There is the need to limit on-going soil degradation processes and to implement extensive soil restoration activities in order to strive towards a land degradation neutral (LDN) world, as called upon by SDG 15. Sustainable soil management needs to be placed at the core of any LDN strategy and therefore it is of highest importance that the recently approved Voluntary Guidelines for Sustainable Soil Management (VGSSM) of FAO get fully implemented at National and local scale.Sustainable soil management is not only relevant for the protection of fertile soils for food production, but also to mitigate and adopt to climate change at to preserve the large soil biodiversity pool. Therefore the VGSSM are not only relevant to FAO, but also the the climate change convention (UNFCCC) and the biodiversity convention (CBD). An integrated assessment of the current land degradation processes and the available land restoration practices is needed in order to fully evaluate the potential for effectively achieving LDN by 2030. The on-going Land Degradation and Restoration Assessment (LDRA) of the Intergovernmental Platform for Biodiversity and Ecosystem Services (IPBES) will provide the necessary scientific basis for the full implementation of the necessary measures for achieving the planned SGS's relevant to land and soils by 2030.

Detecting surface runoff location in a small catchment using distributed and simple observation method

NASA Astrophysics Data System (ADS)

Dehotin, Judicaël; Breil, Pascal; Braud, Isabelle; de Lavenne, Alban; Lagouy, Mickaël; Sarrazin, Benoît

2015-06-01

Surface runoff is one of the hydrological processes involved in floods, pollution transfer, soil erosion and mudslide. Many models allow the simulation and the mapping of surface runoff and erosion hazards. Field observations of this hydrological process are not common although they are crucial to evaluate surface runoff models and to investigate or assess different kinds of hazards linked to this process. In this study, a simple field monitoring network is implemented to assess the relevance of a surface runoff susceptibility mapping method. The network is based on spatially distributed observations (nine different locations in the catchment) of soil water content and rainfall events. These data are analyzed to determine if surface runoff occurs. Two surface runoff mechanisms are considered: surface runoff by saturation of the soil surface horizon and surface runoff by infiltration excess (also called hortonian runoff). The monitoring strategy includes continuous records of soil surface water content and rainfall with a 5 min time step. Soil infiltration capacity time series are calculated using field soil water content and in situ measurements of soil hydraulic conductivity. Comparison of soil infiltration capacity and rainfall intensity time series allows detecting the occurrence of surface runoff by infiltration-excess. Comparison of surface soil water content with saturated water content values allows detecting the occurrence of surface runoff by saturation of the soil surface horizon. Automatic records were complemented with direct field observations of surface runoff in the experimental catchment after each significant rainfall event. The presented observation method allows the identification of fast and short-lived surface runoff processes at a small spatial and temporal resolution in natural conditions. The results also highlight the relationship between surface runoff and factors usually integrated in surface runoff mapping such as topography, rainfall parameters, soil or land cover. This study opens interesting prospects for the use of spatially distributed measurement for surface runoff detection, spatially distributed hydrological models implementation and validation at a reasonable cost.

Improved ground hydrology calculations for global climate models (GCMs) - Soil water movement and evapotranspiration

NASA Technical Reports Server (NTRS)

Abramopoulos, F.; Rosenzweig, C.; Choudhury, B.

1988-01-01

A physically based ground hydrology model is presented that includes the processes of transpiration, evaporation from intercepted precipitation and dew, evaporation from bare soil, infiltration, soil water flow, and runoff. Data from the Goddard Institute for Space Studies GCM were used as inputs for off-line tests of the model in four 8 x 10 deg regions, including Brazil, Sahel, Sahara, and India. Soil and vegetation input parameters were caculated as area-weighted means over the 8 x 10 deg gridbox; the resulting hydrological quantities were compared to ground hydrology model calculations performed on the 1 x 1 deg cells which comprise the 8 x 10 deg gridbox. Results show that the compositing procedure worked well except in the Sahel, where low soil water levels and a heterogeneous land surface produce high variability in hydrological quantities; for that region, a resolution better than 8 x 10 deg is needed.

[Effects of mulching management of Phyllostachys heterocycla forests on the characteristics of soil infiltration and biometrics in southwest Zhejiang Province, China].

PubMed

Wang, Yi Kun; Jin, Ai Wu; Fang, Sheng Zuo

2017-05-18

Soil infiltration, soil physical and chemical properties, root length density and soil fauna diversity were studied in Phyllostachys heterocycla forests with different mulching times in southwest Zhejiang Province, China. Significant differences of soil infiltration capability were found among the forests with different mulching times and among soil layers. Soil infiltration capability generally declined in the deeper soil layers. With mulching management, soil infiltration capability increased under the first mulching, and then declined with the increase of mulching times. The Kostiakov model was suitable for simulating soil infiltration process. With the extending of mulching times (4 to 6 years), soil pH and total/non-capillary porosity decreased, while soil bulk density, soil orga-nic matter and total nitrogen contents increased significantly. Soil initial, steady, and average infiltration rates as well as the cumulative infiltration amount correlated closely with the length density of roots with diameter from 0.5 mm to 5.0 mm, showing a decreasing tendency with the decrease in root length density. Soil fauna density was highest in the forest under the first mulching, and was lowest after third mulching. The decreased numbers of large and meso-arthropods, including Symphyla, Chilopoda, Diplopoda, Hymenoptera and pseudoscorpions, and the micro-arthropods, including Oribatida, Mesostigmata, Onychiuridae, Neanuridae, Cyphoderidae, and Entomobryidae, showed negative effects on soil infiltration. In conclusion, long-term mulching changed soil physical and chemical properties, decreased soil infiltration capability, and suppressed the development of soil fauna, which might cause the decline ofP. heterocycla forests.

Hydropodelogy From the Pedon to the Landscape: Challenges and Accomplishments in the National Cooperative Soil Survey

NASA Astrophysics Data System (ADS)

Hammer, D.; Richardson, J.; Hempel, J.; Market, P.

2005-12-01

American pedology has focused on the National Cooperative Soil Survey. Primary responsibility rests with the U.S. Department of Agriculture. The primary goals, are legislatively mandated, are to map the country's soils, make interpretations, provide information to clients, maintain and market the soil survey. The first goal is near completion and focus is shifting to the other three. Concomitantly, American pedological science is being impacted by several conditions: technological advances; land use changes at unprecedented scales and magnitudes; a burgeoning population increasingly "separated" from the land; and a major emphasis in universities upon biological ("life") sciences at the DNA scale - as if soil, nutrients and water are not life essentials. Effects of the Flood of 1993 and Hurricane Katrina suggest that humans do not understand earth/climate interactions, particularly climatic extremes. Pedologists know the focus on soil classification and mapping was at the expense of understanding processes. Hydropedology is a holistic approach to understanding soil and geomorphic process in order to predict the impacts of perturbations. Water movement on and in the soil is the primary mechanism of distributing and altering sediments and chemicals (pedogenesis), and depends for its success upon understanding that the soil profile is the record of developmental history at that landscape site. Hydropedologists believe soil scientists can use pedons (point data) from appropriate locations from flownets in complex landscapes to extrapolate processes. This is the "pedotransfer function" concept. Technological advances are coupled with the existing soil survey information to create important soil-landscape interpretations at a variety of scales. Early results have been very successful. Quantification of soil systems can be classified broadly into three categories; hard data, soft data and tacit knowledge. "Hard data" are measured numbers, and include such attributes as pH, texture, cation exchange capacity and event-specific rainfall. "Soft data" include soil maps, SSURGO data and climate maps. Soft data are combinations of observations, measurements and inferences that produce maps and models at various scales. "Tacit knowledge" is human understanding that results from focused experience within a system. A skilled soil scientist with tacit knowledge specific to a particular region can combination hard and soft data to develop important and useful interpretations and predictions. Illustrations from natural and urban settings will be provided. Soils and climate are temporally and spatially variable at all scales. Soil systems respond differently to different climates and perturbations. For example, the recent pluvial period in the Prairie Pothole region is changing surface soil sodium concentrations and locations and sizes of discharge wetlands. This is a relatively short-term response to a regional climate shift. Climatic shift in Oxisol landscapes will have little effect on soil cations. To optimize soil interpretations, focus must be on quantifying region-specific "dynamic" soil, geomorphic and climatic attributes. Recognizing these needs, the National Cooperative Soil Survey will develop regional watershed projects that focus on quantifying soil-water relationships that can be used at a variety of scales.

30 CFR 773.6 - Public participation in permit processing.

Code of Federal Regulations, 2010 CFR

2010-07-01

...) Information that pertains only to the analysis of the chemical and physical properties of the coal to be mined... operation, including the U.S. Department of Agriculture Soil Conservation Service district office, the local... pertaining to coal seams, test borings, core samplings, or soil samples in an application shall be made...

30 CFR 773.6 - Public participation in permit processing.

Code of Federal Regulations, 2011 CFR

2011-07-01

...) Information that pertains only to the analysis of the chemical and physical properties of the coal to be mined... operation, including the U.S. Department of Agriculture Soil Conservation Service district office, the local... pertaining to coal seams, test borings, core samplings, or soil samples in an application shall be made...

Impacts of single and recurrent wildfires on topsoil moisture regime

NASA Astrophysics Data System (ADS)

González-Pelayo, Oscar; Malvar, Maruxa; van den Elsen, Erik; Hosseini, Mohammadreza; Coelho, Celeste; Ritsema, Coen; Bautista, Susana; Keizer, Jacob

2017-04-01

The increasing fire recurrence on forest in the Mediterranean basin is well-established by future climate scenarios due to land use changes and climate predictions. By this, shifts on mature pine woodlands to shrub rangelands are of major importance on forest ecosystems buffer functions, since historical patterns of established vegetation help to recover from fire disturbances. This fact, together with the predicted expansion of the drought periods, will affect feedback processes of vegetation patterns since water availability on these seasons are driven by post-fire local soil properties. Although fire impacts of soil properties and water availability has been widely studied using the fire severity as the main factor, little research is developed on post-fire soil moisture patterns, including the fire recurrence as a key explanatory variable. The following research investigated, in pine woodlands of north central Portugal, the short-term consequences (one year after a fire) of wildfire recurrence on the surface soil moisture content (SMC) and on effective soil water (SWEFF, parameter that includes actual daily soil moisture, soil field capacity-FC and permanent wilting point-PWP). The study set-up includes analyses at two fire recurrence scenarios (1x- and 4x-burnt since 1975), at a patch level (shrub patch/interpatch) and at two soil depths (2.5 and 7.5 cm) in a nested approach. Understanding how fire recurrence affects water in soil over space and time is the main goal of this research. The use of soil moisture sensors in a nested approach, the rainfall features and analyses on basic soil properties as soil organic matter, texture, bulk density, pF curves, soil water repellency and soil surface components will establish which factors has the largest role in controlling soil moisture behavior. Main results displayed, in a seasonal and yearly basis, no differences on SMC as increasing fire recurrence (1x- vs 4x-burnt) neither between patch/interpatch microsites at both two soil depths. Otherwise, in a yearly basis and during soil drying cycles, it was found less effective water on soil at the surface layers of the 4x-burnt and between shrub interpatches, based on the worst soil hydrological conditions (PWP) and the increasing percentage of abiotic soil surface components as increasing fire recurrence. Our results suggest that the inclusion of soil hydrological properties, as pF-curves, on the soil water effectiveness calculation seems to be a better indicator of water availability that volumetric SM per se. Otherwise, the use of a nested approach methodology, stresses how fire recurrence, expected increases in the summer drought spells and, the increasing dominance of abiotic soil surface components, are the factors that much influence soil eco-hydrological functioning in fire prone ecosystems. Furthermore, this research point out how post-fire soil structural quality into plant interpatches could provoke looping feedback processes triggering desertification situations also in humid Mediterranean forestlands.

Superfund Record of Decision (EPA Region 4): Aberdeen Pesticide Dumps, Moore County, Aberdeen, NC. (First remedial action), (Amendment), September 1991

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1991-09-30

The Aberdeen Pesticide Dumps site consists of a plant area and four disposal areas in Aberdeen, Moore County, North Carolina. The five areas are Farm Chemicals, Twin Sites, Fairway Six, McIver Dump, and Route 211. Ground water is the main source of drinking water for local residents. After investigations by EPA's Emergency Response Section in 1985 and 1986, several removal actions were conducted, including removing surface contaminants, drums, and soil in several areas. The ROD concurrently addresses surface and subsurface soil contamination. The amended remedial action for this site includes conducting a treatability study using thermal desorption; excavating and treatingmore » a total of 123,933 cubic yards of soil from all five areas including previously excavated soil from the Fairway Six and McIver Dump areas using an onsite thermal desorption process that includes an activated carbon adsorption to treat off-gases, followed by offsite incineration of residual organics.« less

Soil Monitor: an advanced and freely accesible platform to challenge soil sealing in Italy

NASA Astrophysics Data System (ADS)

Langella, Giuliano; Basile, Angelo; Giannecchini, Simone; Domenico Moccia, Francesco; Munafò, Michele; Terribile, Fabio

2017-04-01

Soil sealing is known to be one of the most serious soil degradation processes since it greatly disturbs or removes essential ecosystem services. Although important policy documents (Roadmap to a Resource Efficient in Europe, SDG'S) promise to mitigate this problem, there are still no signs of change and today soil sealing continues to increase globally. We believe an immediate action is required to reduce the distance between the grand policy declarations and the poor availability of operational - and scientifically robust - tools to challenge soil sealing. These tools must be able to support the decisions made by people who manage and control the soil sealing, namely urban and landscape planning professionals and authorities. In this contribution, we demonstrate that soil sealing can be effectively challenged by the implementation of a dedicated Geospatial Cyberinfrastructure. The platform we are developing - named Soil Monitor - is at now a well-functioning prototype freely available at http://www.soilmonitor.it/. It has been developed by research scientists coming from different disciplines. The national authority for environmental protection (ISPRA) provided the dataset while INU (Italian association of urban planners) tested the soil sealing and the urban planning indicators. More generally, Soil Monitor has been designed to support the Italian policy documents connected to soil sealing: AS 1181, AS 2383, L. 22 May 2015, n. 68; L. 28 December, n. 221). Thus, it connects many different soil sealing aspects including science, community, policy and economy. Soil Monitor performs geospatial computation in real-time to support the decision making in the landscape planning. This aims at measuring soil sealing in order to mitigate it and in particular at recognizing actions to achieve the land degradation neutrality. The web platform covers the entire Italy, even though it is "Country-agnostic". Data are processed at a very high spatial resolution (10-20 m), which is a "must" for effective landscape planning. Computation is designed to be highly scalable enabling real time responses over a customised range of spatial extents and high-demand calculations are embedded by means of advanced parallel codes running fast on GPUs (Graphical Processing Units). For any Italian area of interest drawn or selected by the user the analysis includes real time quantification of (i) land use changes at different times (ii) rural landscape fragmentation, (iii) loss of ecosystem services after new urbanisation, (iv) potential impact of new green corridors. A library of parallel routines based on the CUDA (Computing Unified Device Architecture) framework is going to be built which enables the easy implementation of new indicators for measuring land state and degradation.

Modeling N Cycling during Succession after Forest Disturbance: an Analysis of N Mining and Retention Hypothesis

NASA Astrophysics Data System (ADS)

Zhou, Z.; Ollinger, S. V.; Ouimette, A.; Lovett, G. M.; Fuss, C. B.; Goodale, C. L.

2017-12-01

Dissolved inorganic nitrogen losses at the Hubbard Brook Experimental Forest (HBEF), New Hampshire, USA, have declined in recent decades, a pattern that counters expectations based on prevailing theory. An unbalanced ecosystem nitrogen (N) budget implies there is a missing component for N sink. Hypotheses to explain this discrepancy include increasing rates of denitrification and accumulation of N in mineral soil pools following N mining by plants. Here, we conducted a modeling analysis fused with field measurements of N cycling, specifically examining the hypothesis relevant to N mining and retention in mineral soils. We included simplified representations of both mechanisms, N mining and retention, in a revised ecosystem process model, PnET-SOM, to evaluate the dynamics of N cycling during succession after forest disturbance at the HBEF. The predicted N mining during the early succession was regulated by a metric representing a potential demand of extra soil N for large wood growth. The accumulation of nitrate in mineral soil pools was a function of the net aboveground biomass accumulation and soil N availability and parameterized based on field 15N tracer incubation data. The predicted patterns of forest N dynamics were consistent with observations. The addition of the new algorithms also improved the predicted DIN export in stream water with an R squared of 0.35 (P<0.01) aganist observations. Predicted mining processes had an average rate of 7.4 kgNha-1yr-1 and Predicted rates of N retention processes were 5.2 kgNha-1yr-1, both of which were in line with estimates only based on field data. The predicted trend of low DIN export could continue for another 70 years to pay back the mined N in mineral soils. Predicted ecosystem N balance showed that N gas loss could account for 14-46% of the total N deposition, the soil mining about 103% during the early succession, and soil retention about 35% at the current forest stage at the HBEF.

Soil moisture sensitivity of autotrophic and heterotrophic forest floor respiration in boreal xeric pine and mesic spruce forests

NASA Astrophysics Data System (ADS)

Ťupek, Boris; Launiainen, Samuli; Peltoniemi, Mikko; Heikkinen, Jukka; Lehtonen, Aleksi

2016-04-01

Litter decomposition rates of the most process based soil carbon models affected by environmental conditions are linked with soil heterotrophic CO2 emissions and serve for estimating soil carbon sequestration; thus due to the mass balance equation the variation in measured litter inputs and measured heterotrophic soil CO2 effluxes should indicate soil carbon stock changes, needed by soil carbon management for mitigation of anthropogenic CO2 emissions, if sensitivity functions of the applied model suit to the environmental conditions e.g. soil temperature and moisture. We evaluated the response forms of autotrophic and heterotrophic forest floor respiration to soil temperature and moisture in four boreal forest sites of the International Cooperative Programme on Assessment and Monitoring of Air Pollution Effects on Forests (ICP Forests) by a soil trenching experiment during year 2015 in southern Finland. As expected both autotrophic and heterotrophic forest floor respiration components were primarily controlled by soil temperature and exponential regression models generally explained more than 90% of the variance. Soil moisture regression models on average explained less than 10% of the variance and the response forms varied between Gaussian for the autotrophic forest floor respiration component and linear for the heterotrophic forest floor respiration component. Although the percentage of explained variance of soil heterotrophic respiration by the soil moisture was small, the observed reduction of CO2 emissions with higher moisture levels suggested that soil moisture response of soil carbon models not accounting for the reduction due to excessive moisture should be re-evaluated in order to estimate right levels of soil carbon stock changes. Our further study will include evaluation of process based soil carbon models by the annual heterotrophic respiration and soil carbon stocks.

Biotic and abiotic controls on biogenic volatile organic compound fluxes from a subalpine forest floor

NASA Astrophysics Data System (ADS)

Gray, Christopher M.; Monson, Russell K.; Fierer, Noah

2014-04-01

Nonmethane biogenic volatile organic compounds (BVOCs) play key roles in the atmosphere, where they can influence a wide range of chemical processes, and in soils, where they can alter the rates of biogeochemical cycles and impact the growth of plants and soil organisms. However, the diversity and quantities of BVOCs released from or taken up by soils remain poorly characterized as do the biotic and abiotic controls on these fluxes. Here we used proton transfer reaction mass spectrometry to quantify BVOC flux rates from soils with and without active root systems in a subalpine coniferous forest. The total measured BVOC flux averaged 102 nmol m-2 h-1 (an estimated 2.0 µg-C m-2 h-1). The individual BVOCs with the highest net emissions from soil included monoterpenes and methanol (averaging 646 and 641 ng-C m-2 h-1, respectively) while soil represented a net sink of isoprene (-98 ng-C m-2 h-1) and formaldehyde (-37 ng-C m-2 h-1). Tree roots, directly or indirectly, contributed an average of 53% of the total carbon emitted from the soil as BVOCs, with methanol and acetaldehyde among those BVOCs most strongly associated with active root presence. The fluxes of most of the dominant BVOCs emitted from soil, including methanol, increased linearly with increasing temperature. Together the fluxes of certain BVOCs into or out of the forest floor (particularly methanol, isoprene, and monoterpenes) are likely relevant to ecosystem-level processes and belowground ecology, but these fluxes are highly variable and are strongly controlled by both root presence and soil abiotic conditions.

Ground-based Remote Sensing for Quantifying Subsurface and Surface Co-variability to Scale Arctic Ecosystem Functioning

NASA Astrophysics Data System (ADS)

Oktem, R.; Wainwright, H. M.; Curtis, J. B.; Dafflon, B.; Peterson, J.; Ulrich, C.; Hubbard, S. S.; Torn, M. S.

2016-12-01

Predicting carbon cycling in Arctic requires quantifying tightly coupled surface and subsurface processes including permafrost, hydrology, vegetation and soil biogeochemistry. The challenge has been a lack of means to remotely sense key ecosystem properties in high resolution and over large areas. A particular challenge has been characterizing soil properties that are known to be highly heterogeneous. In this study, we exploit tightly-coupled above/belowground ecosystem functioning (e.g., the correlations among soil moisture, vegetation and carbon fluxes) to estimate subsurface and other key properties over large areas. To test this concept, we have installed a ground-based remote sensing platform - a track-mounted tram system - along a 70 m transect in the ice-wedge polygonal tundra near Barrow, Alaska. The tram carries a suite of near-surface remote sensing sensors, including sonic depth, thermal IR, NDVI and multispectral sensors. Joint analysis with multiple ground-based measurements (soil temperature, active layer soil moisture, and carbon fluxes) was performed to quantify correlations and the dynamics of above/belowground processes at unprecedented resolution, both temporally and spatially. We analyzed the datasets with particular focus on correlating key subsurface and ecosystem properties with surface properties that can be measured by satellite/airborne remote sensing over a large area. Our results provided several new insights about system behavior and also opens the door for new characterization approaches. We documented that: (1) soil temperature (at >5 cm depth; critical for permafrost thaw) was decoupled from soil surface temperature and was influenced strongly by soil moisture, (2) NDVI and greenness index were highly correlated with both soil moisture and gross primary productivity (based on chamber flux data), and (3) surface deformation (which can be measured by InSAR) was a good proxy for thaw depth dynamics at non-inundated locations.

Ecotoxicological evaluation of diesel-contaminated soil before and after a bioremediation process.

PubMed

Molina-Barahona, L; Vega-Loyo, L; Guerrero, M; Ramírez, S; Romero, I; Vega-Jarquín, C; Albores, A

2005-02-01

Evaluation of contaminated sites is usually performed by chemical analysis of pollutants in soil. This is not enough either to evaluate the environmental risk of contaminated soil nor to evaluate the efficiency of soil cleanup techniques. Information on the bioavailability of complex mixtures of xenobiotics and degradation products cannot be totally provided by chemical analytical data, but results from bioassays can integrate the effects of pollutants in complex mixtures. In the preservation of human health and environment quality, it is important to assess the ecotoxicological effects of contaminated soils to obtain a better evaluation of the healthiness of this system. The monitoring of a diesel-contaminated soil and the evaluation of a bioremediation technique conducted on a microcosm scale were performed by a battery of ecotoxicological tests including phytotoxicity, Daphnia magna, and nematode assays. In this study we biostimulated the native microflora of soil contaminated with diesel by adding nutrients and crop residue (corn straw) as a bulking agent and as a source of microorganisms and nutrients; in addition, moisture was adjusted to enhance diesel removal. The bioremediation process efficiency was evaluated directly by an innovative, simple phytotoxicity test system and the diesel extracts by Daphnia magna and nematode assays. Contaminated soil samples were revealed to have toxic effects on seed germination, seedling growth, and Daphnia survival. After biostimulation, the diesel concentration was reduced by 50.6%, and the soil samples showed a significant reduction in phytotoxicity (9%-15%) and Daphnia assays (3-fold), confirming the effectiveness of the bioremediation process. Results from our microcosm study suggest that in addition to the evaluation of the bioremediation processes efficiency, toxicity testing is different with organisms representative of diverse phylogenic levels. The integration of analytical, toxicological and bioremediation data is necessary to properly assess the ecological risk of bioremediation processes. (c) 2005 Wiley Periodicals, Inc.

Evaluation of soil water stable isotope analysis by H2O(liquid)-H2O(vapor) equilibration method

NASA Astrophysics Data System (ADS)

Gralher, Benjamin; Stumpp, Christine

2014-05-01

Environmental tracers like stable isotopes of water (δ18O, δ2H) have proven to be valuable tools to study water flow and transport processes in soils. Recently, a new technique for soil water isotope analysis has been developed that employs a vapor phase being in isothermal equilibrium with the liquid phase of interest. This has increased the potential application of water stable isotopes in unsaturated zone studies as it supersedes laborious extraction of soil water. However, uncertainties of analysis and influencing factors need to be considered. Therefore, the objective of this study was to evaluate different methodologies of analysing stable isotopes in soil water in order to reduce measurement uncertainty. The methodologies included different preparation procedures of soil cores for equilibration of vapor and soil water as well as raw data correction. Two different inflatable sample containers (freezer bags, bags containing a metal layer) and equilibration atmospheres (N2, dry air) were tested. The results showed that uncertainties for δ18O were higher compared to δ2H that cannot be attributed to any specific detail of the processing routine. Particularly, soil samples with high contents of organic matter showed an apparent isotope enrichment which is indicative for fractionation due to evaporation. However, comparison of water samples obtained from suction cups with the local meteoric water line indicated negligible fractionation processes in the investigated soils. Therefore, a method was developed to correct the raw data reducing the uncertainties of the analysis.. We conclude that the evaluated method is advantageous over traditional methods regarding simplicity, resource requirements and sample throughput but careful consideration needs to be made regarding sample handling and data processing. Thus, stable isotopes of water are still a good tool to determine water flow and transport processes in the unsaturated zone.

Ecohydrologic processes and soil thickness feedbacks control limestone-weathering rates in a karst landscape

DOE PAGES

Dong, Xiaoli; Cohen, Matthew J.; Martin, Jonathan B.; ...

2018-05-18

Here, chemical weathering of bedrock plays an essential role in the formation and evolution of Earth's critical zone. Over geologic time, the negative feedback between temperature and chemical weathering rates contributes to the regulation of Earth climate. The challenge of understanding weathering rates and the resulting evolution of critical zone structures lies in complicated interactions and feedbacks among environmental variables, local ecohydrologic processes, and soil thickness, the relative importance of which remains unresolved. We investigate these interactions using a reactive-transport kinetics model, focusing on a low-relief, wetland-dominated karst landscape (Big Cypress National Preserve, South Florida, USA) as a case study.more » Across a broad range of environmental variables, model simulations highlight primary controls of climate and soil biological respiration, where soil thickness both supplies and limits transport of biologically derived acidity. Consequently, the weathering rate maximum occurs at intermediate soil thickness. The value of the maximum weathering rate and the precise soil thickness at which it occurs depend on several environmental variables, including precipitation regime, soil inundation, vegetation characteristics, and rate of groundwater drainage. Simulations for environmental conditions specific to Big Cypress suggest that wetland depressions in this landscape began to form around beginning of the Holocene with gradual dissolution of limestone bedrock and attendant soil development, highlighting large influence of age-varying soil thickness on weathering rates and consequent landscape development. While climatic variables are often considered most important for chemical weathering, our results indicate that soil thickness and biotic activity are equally important. Weathering rates reflect complex interactions among soil thickness, climate, and local hydrologic and biotic processes, which jointly shape the supply and delivery of chemical reactants, and the resulting trajectories of critical zone and karst landscape development.« less

Ecohydrologic processes and soil thickness feedbacks control limestone-weathering rates in a karst landscape

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dong, Xiaoli; Cohen, Matthew J.; Martin, Jonathan B.

Here, chemical weathering of bedrock plays an essential role in the formation and evolution of Earth's critical zone. Over geologic time, the negative feedback between temperature and chemical weathering rates contributes to the regulation of Earth climate. The challenge of understanding weathering rates and the resulting evolution of critical zone structures lies in complicated interactions and feedbacks among environmental variables, local ecohydrologic processes, and soil thickness, the relative importance of which remains unresolved. We investigate these interactions using a reactive-transport kinetics model, focusing on a low-relief, wetland-dominated karst landscape (Big Cypress National Preserve, South Florida, USA) as a case study.more » Across a broad range of environmental variables, model simulations highlight primary controls of climate and soil biological respiration, where soil thickness both supplies and limits transport of biologically derived acidity. Consequently, the weathering rate maximum occurs at intermediate soil thickness. The value of the maximum weathering rate and the precise soil thickness at which it occurs depend on several environmental variables, including precipitation regime, soil inundation, vegetation characteristics, and rate of groundwater drainage. Simulations for environmental conditions specific to Big Cypress suggest that wetland depressions in this landscape began to form around beginning of the Holocene with gradual dissolution of limestone bedrock and attendant soil development, highlighting large influence of age-varying soil thickness on weathering rates and consequent landscape development. While climatic variables are often considered most important for chemical weathering, our results indicate that soil thickness and biotic activity are equally important. Weathering rates reflect complex interactions among soil thickness, climate, and local hydrologic and biotic processes, which jointly shape the supply and delivery of chemical reactants, and the resulting trajectories of critical zone and karst landscape development.« less

Modelling of Space-Time Soil Moisture in Savannas and its Relation to Vegetation Patterns

NASA Astrophysics Data System (ADS)

Rodriguez-Iturbe, I.; Mohanty, B.; Chen, Z.

2017-12-01

A physically derived space-time representation of the soil moisture field is presented. It includes the incorporation of a "jitter" process acting over the space-time soil moisture field and accounting for the short distance heterogeneities in topography, soil, and vegetation characteristics. The modelling scheme allows for the representation of spatial random fluctuations of soil moisture at small spatial scales and reproduces quite well the space-time correlation structure of soil moisture from a field study in Oklahoma. It is shown that the islands of soil moisture above different thresholds have sizes which follow power distributions over an extended range of scales. A discussion is provided about the possible links of this feature with the observed power law distributions of the clusters of trees in savannas.

Individual-Based Model of Microbial Life on Hydrated Rough Soil Surfaces

PubMed Central

Kim, Minsu; Or, Dani

2016-01-01

Microbial life in soil is perceived as one of the most interesting ecological systems, with microbial communities exhibiting remarkable adaptability to vast dynamic environmental conditions. At the same time, it is a notoriously challenging system to understand due to its complexity including physical, chemical, and biological factors in synchrony. This study presents a spatially-resolved model of microbial dynamics on idealised rough soil surfaces represented as patches with different (roughness) properties that preserve the salient hydration physics of real surfaces. Cell level microbial interactions are considered within an individual-based formulation including dispersion and various forms of trophic dependencies (competition, mutualism). The model provides new insights into mechanisms affecting microbial community dynamics and gives rise to spontaneous formation of microbial community spatial patterns. The framework is capable of representing many interacting species and provides diversity metrics reflecting surface conditions and their evolution over time. A key feature of the model is its spatial scalability that permits representation of microbial processes from cell-level (micro-metric scales) to soil representative volumes at sub-metre scales. Several illustrative examples of microbial trophic interactions and population dynamics highlight the potential of the proposed modelling framework to quantitatively study soil microbial processes. The model is highly applicable in a wide range spanning from quantifying spatial organisation of multiple species under various hydration conditions to predicting microbial diversity residing in different soils. PMID:26807803

Effect of soil property uncertainties on permafrost thaw projections: a calibration-constrained analysis: Modeling Archive

DOE Data Explorer

J.C. Rowland; D.R. Harp; C.J. Wilson; A.L. Atchley; V.E. Romanovsky; E.T. Coon; S.L. Painter

2016-02-02

This Modeling Archive is in support of an NGEE Arctic publication available at doi:10.5194/tc-10-341-2016. This dataset contains an ensemble of thermal-hydro soil parameters including porosity, thermal conductivity, thermal conductivity shape parameters, and residual saturation of peat and mineral soil. The ensemble was generated using a Null-Space Monte Carlo analysis of parameter uncertainty based on a calibration to soil temperatures collected at the Barrow Environmental Observatory site by the NGEE team. The micro-topography of ice wedge polygons present at the site is included in the analysis using three 1D column models to represent polygon center, rim and trough features. The Arctic Terrestrial Simulator (ATS) was used in the calibration to model multiphase thermal and hydrological processes in the subsurface.

Assessment of soil health and fertility indicators with mobile phone imagery

NASA Astrophysics Data System (ADS)

Aitkenhead, Matt; Gwatkin, Richard; Coull, Malcolm; Donnelly, David

2015-04-01

Work on rapid soil assessment in the field has led to many hand-held sensors for soil monitoring (e.g. NIR, FTIR, XRF). Recent work by a research team at the James Hutton Institute has led to an integrated framework of mobile phones, apps and server-side processing. One example of this is the SOCIT app for estimating soil organic matter and carbon using geolocated mobile phone camera imagery. The SOCIT app is only applicable for agricultural soils in Scotland, and our intention is to expand this work both geographically and in functional ability. Ongoing work for the development of a prototype app for estimating soil characteristics across Europe using mobile phone imagery and the JRC LUCAS dataset will be described. Additionally, we will demonstrate recent work in estimating a number of soil health indicators from more detailed analysis of soil photographs. Accuracy levels achieved for estimating soil organic matter and organic carbon content, pH, structure, cation exchange capacity and texture vary and are not as good as those achieved with laboratory analysis, but are suitable for rapid field-based assessment. Issues relating to this work include colour stabilisation and calibration, integration with data on site characteristics, data processing, model development and the ethical use of data captured by others, and each of these topics will also be discussed.

Chemistry and Mineralogy of Antarctica Dry Valley Soils: Implications for Mars

NASA Technical Reports Server (NTRS)

Quinn, J. E.; Golden, D. C.; Graff, T. G.; Ming, D. W.; Morris, R. V.; Douglas, S.; Kounaves, S. P.; McKay, C. P.; Tamppari, L, K.; Smith, P. H.;

Exfiltrometer apparatus and method for measuring unsaturated hydrologic properties in soil

DOEpatents

Hubbell, Joel M.; Sisson, James B.; Schafer, Annette L.

2006-01-17

Exfiltrometer apparatus includes a container for holding soil. A sample container for holding sample soil is positionable with respect to the container so that the sample soil contained in the sample container is in communication with soil contained in the container. A first tensiometer operatively associated with the sample container senses a surface water potential at about a surface of the sample soil contained in the sample container. A second tensiometer operatively associated with the sample container senses a first subsurface water potential below the surface of the sample soil. A water content sensor operatively associated with the sample container senses a water content in the sample soil. A water supply supplies water to the sample soil. A data logger operatively connected to the first and second tensiometers, and to the water content sensor receives and processes data provided by the first and second tensiometers and by the water content sensor.

Soil moisture datasets at five sites in the central Sierra Nevada and northern Coast Ranges, California

USGS Publications Warehouse

Stern, Michelle A.; Anderson, Frank A.; Flint, Lorraine E.; Flint, Alan L.

2018-05-03

In situ soil moisture datasets are important inputs used to calibrate and validate watershed, regional, or statewide modeled and satellite-based soil moisture estimates. The soil moisture dataset presented in this report includes hourly time series of the following: soil temperature, volumetric water content, water potential, and total soil water content. Data were collected by the U.S. Geological Survey at five locations in California: three sites in the central Sierra Nevada and two sites in the northern Coast Ranges. This report provides a description of each of the study areas, procedures and equipment used, processing steps, and time series data from each site in the form of comma-separated values (.csv) tables.

Mercury in the Soil of the Tunka Depression

NASA Astrophysics Data System (ADS)

Lyapina, E. E.; Cherkashina, A. A.

2018-01-01

The work evaluates the general distribution of mercury in the soil cover of the Tunkinskaya depression (the Republic of Buryatia, the national park "Tunkinsky"). For this purpose, its gross contents in natural and agrogenically transformed soils were studied: plow lands, fallow lands, hayfields and pastures. The physico-technical characteristics of soils, the content of organic carbon, group composition of humus are determined. The method of processing the results included the calculation of the ecological and geochemical parameters: the concentration coefficient relative to the background, MAC, Clark concentration relative to the Earth’s crust, the Earth’s soils, the identification of the relationship with the physical and technical characteristics of the soil, and the content of C02, CO2 carbonates, fulvic and humic acids.

Predicting soil formation on the basis of transport-limited chemical weathering

NASA Astrophysics Data System (ADS)

Yu, Fang; Hunt, Allen Gerhard

2018-01-01

Soil production is closely related to chemical weathering. It has been shown that, under the assumption that chemical weathering is limited by solute transport, the process of soil production is predictable. However, solute transport in soil cannot be described by Gaussian transport. In this paper, we propose an approach based on percolation theory describing non-Gaussian transport of solute to predict soil formation (the net production of soil) by considering both soil production from chemical weathering and removal of soil from erosion. Our prediction shows agreement with observed soil depths in the field. Theoretical soil formation rates are also compared with published rates predicted using soil age-profile thickness (SAST) method. Our formulation can be incorporated directly into landscape evolution models on a point-to-point basis as long as such models account for surface water routing associated with overland flow. Further, our treatment can be scaled-up to address complications associated with continental-scale applications, including those from climate change, such as changes in vegetation, or surface flow organization. The ability to predict soil formation rates has implications for understanding Earth's climate system on account of the relationship to chemical weathering of silicate minerals with the associated drawdown of atmospheric carbon, but it is also important in geomorphology for understanding landscape evolution, including for example, the shapes of hillslopes, and the net transport of sediments to sedimentary basins.

The earthworm gastrointestinal effect on the release of organic bound residues in soils

NASA Astrophysics Data System (ADS)

Du, J. H.

2018-03-01

Earthworm activities promote the release of bound residues and the digestive activities of earthworms contribute to the process. Earthworm digestive effects on bound residues can be divided into physical and chemical effects. Physical effects include gastrointestinal abrasion and mixing. The abrasion of soil and litter residues in earthworm gizzards and intestine can grind the food into fine particles, which increase the contact surface with microbial and promote the desorption of bound residues. Chemical effects are attributed to the secreted surfactant substances and digestive enzymes. The surfactants, especially at levels that lead to micellization, can enhance the desorption process of the organic contaminants that sored in the soil. The enzymes in earthworm digestive tracts can decompose the humus in soil, which may promote the release of organic residues that bind with humus.

EMERGING TECHNOLOGY BULLETIN: NEW JERSEY INSTITUTE OF TECHNOLOGY - GHEA ASSOCIATES PROCESS

EPA Science Inventory

The GHEA Associates process applies surfactants and additives to soil washing and wastewater treatment to make organic and metal contaminants soluble (figure 1). The process components include a 25-gal extractor, solid liquid separation, rinse, mixer-settler, and ultrafiltration ...

Anthropic changes to the biotic factor of soil formation from forests to managed grasslands along summits of the western Pyrenees Mountains, France

NASA Astrophysics Data System (ADS)

Leigh, David; Gragson, Theodore

2017-04-01

Mounting evidence indicates that highland pastures of the humid-temperate western Pyrenees were converted from mixed forests to managed grasslands thousands of years ago, as early as during the late Neolithic and Bronze age by human actions including use of fire. We observe pronounced differences between soil profiles of ancient pastures and old-growth forests in otherwise similar landscape positions. In order to test physical and chemical differences, we collected paired samples of forest versus grassland soils at four separate hillslope sites where there was a clear boundary between the two vegetation types. Animal trails were excluded from sampling. Factors of climate, topography, parent material, and time of soil formation were essentially identical in the forests and pastures of each site, but the time of soil under grassland vegetation may have varied. Each paired hillslope site included five core samples (7.6 cm diameter) from the upper 7.6 cm of the mineral soil within each vegetation type, and the A horizon thickness was recorded at each core hole site. In addition, one complete soil profile was sampled in each vegetation type at each site, making a total of 20 core samples and 4 complete profiles from each respective vegetation type. In addition, we measured the magnetic susceptibility of the mineral soil surface on two transects crossing the vegetation boundary. Core samples have been measured for bulk density, pH, plant-available nutrients, and organic matter; and tests for total carbon and nitrogen, amorphous silica, charcoal, and other forms of black carbon are ongoing. Preliminary results indicate pastured A horizons are about three times as thick as forested soils, contain more organic matter, have lower soil bulk densities, have much finer and stronger structural development of soil aggregates. These traits favor much greater infiltration and water holding capacities of the pastured soils, which we have validated with saturated hydraulic conductivity tests. Pedogenically, the pastured soils indicate that melanization processes have been much more pronounced than in the forested soils. Distinct changes in soil materials result from conversion to pasture. Significantly more black carbon (including macro-charcoal) appears to be present in the pastured soils, indicating that it plays an important role in melanization, in addition to long-term sequestration of carbon. Pastured soils contain greater contents of amorphous silica due to more rapid phytolith production from grasses as opposed to trees. Pastures register significantly higher soil magnetic susceptibility than forests, presumably from past use of fire. In essence, anthropic manipulation of the biotic factor of pedogenesis has created new soil materials, processes, and functions. Our current research involves radiocarbon and chronostratigraphy to establish rates of this anthropisation of the biotic factor.

Representation of dissolved organic carbon in the JULES land surface model (vn4.4_JULES-DOCM)

NASA Astrophysics Data System (ADS)

Nakhavali, Mahdi; Friedlingstein, Pierre; Lauerwald, Ronny; Tang, Jing; Chadburn, Sarah; Camino-Serrano, Marta; Guenet, Bertrand; Harper, Anna; Walmsley, David; Peichl, Matthias; Gielen, Bert

2018-02-01

Current global models of the carbon (C) cycle consider only vertical gas exchanges between terrestrial or oceanic reservoirs and the atmosphere, thus not considering the lateral transport of carbon from the continents to the oceans. Therefore, those models implicitly consider all of the C which is not respired to the atmosphere to be stored on land and hence overestimate the land C sink capability. A model that represents the whole continuum from atmosphere to land and into the ocean would provide a better understanding of the Earth's C cycle and hence more reliable historical or future projections. A first and critical step in that direction is to include processes representing the production and export of dissolved organic carbon in soils. Here we present an original representation of dissolved organic C (DOC) processes in the Joint UK Land Environment Simulator (JULES-DOCM) that integrates a representation of DOC production in terrestrial ecosystems based on the incomplete decomposition of organic matter, DOC decomposition within the soil column, and DOC export to the river network via leaching. The model performance is evaluated in five specific sites for which observations of soil DOC concentration are available. Results show that the model is able to reproduce the DOC concentration and controlling processes, including leaching to the riverine system, which is fundamental for integrating terrestrial and aquatic ecosystems. Future work should include the fate of exported DOC in the river system as well as DIC and POC export from soil.

Identification of sensitive parameters in the modeling of SVOC reemission processes from soil to atmosphere.

PubMed

Loizeau, Vincent; Ciffroy, Philippe; Roustan, Yelva; Musson-Genon, Luc

2014-09-15

Semi-volatile organic compounds (SVOCs) are subject to Long-Range Atmospheric Transport because of transport-deposition-reemission successive processes. Several experimental data available in the literature suggest that soil is a non-negligible contributor of SVOCs to atmosphere. Then coupling soil and atmosphere in integrated coupled models and simulating reemission processes can be essential for estimating atmospheric concentration of several pollutants. However, the sources of uncertainty and variability are multiple (soil properties, meteorological conditions, chemical-specific parameters) and can significantly influence the determination of reemissions. In order to identify the key parameters in reemission modeling and their effect on global modeling uncertainty, we conducted a sensitivity analysis targeted on the 'reemission' output variable. Different parameters were tested, including soil properties, partition coefficients and meteorological conditions. We performed EFAST sensitivity analysis for four chemicals (benzo-a-pyrene, hexachlorobenzene, PCB-28 and lindane) and different spatial scenari (regional and continental scales). Partition coefficients between air, solid and water phases are influent, depending on the precision of data and global behavior of the chemical. Reemissions showed a lower variability to soil parameters (soil organic matter and water contents at field capacity and wilting point). A mapping of these parameters at a regional scale is sufficient to correctly estimate reemissions when compared to other sources of uncertainty. Copyright © 2014 Elsevier B.V. All rights reserved.

Water and vapor transfer in vadose zone of Gobi desert and riparian in the hyper arid environment of Ejina, China

NASA Astrophysics Data System (ADS)

Du, C.; Yu, J.; Sun, F.; Liu, X.

2015-12-01

To reveal how water and vapor transfer in vadose zone affect evapotranspiration in Gobi desert and riparian in hyper arid region is important for understanding eco-hydrological process. Field studies and numerical simulations were imported to evaluate the water and vapor movement processes under non isothermal and lower water content conditions. The soil profiles (12 layers) in Gobi desert and riparian sites of Ejina were installed with sensors to monitor soil moisture and temperature for 1 year. The meteorological conditions and water table were measured by micro weather stations and mini-Divers respectively in the two sites. Soil properties, including particles composition, moisture, bulk density, water retention curve, and saturated hydraulic conductivity of two site soil profiles, was measured. The observations showed that soil temperatures for the two sites displayed large diurnal and seasonal fluctuations. Temperature gradients with depth resulted in a downward in summer and upward in winter and became driving force for thermal vapor movement. Soil moistures in Gobi desert site were very low and varied slowly with time. While the soil moistures in riparian site were complicated due to root distribution but water potentials remained uniform with time. The hydrus-1D was employed to simulate evapotranspiration processes. The simulation results showed the significant difference of evaporation rate in the Gobi desert and riparian sites.

Effect of management and soil moisture regimes on wetland soils total carbon and nitrogen in Tanzania

NASA Astrophysics Data System (ADS)

Kamiri, Hellen; Kreye, Christine; Becker, Mathias

2013-04-01

Wetland soils play an important role as storage compartments for water, carbon and nutrients. These soils implies various conditions, depending on the water regimes that affect several important microbial and physical-chemical processes which in turn influence the transformation of organic and inorganic components of nitrogen, carbon, soil acidity and other nutrients. Particularly, soil carbon and nitrogen play an important role in determining the productivity of a soil whereas management practices could determine the rate and magnitude of nutrient turnover. A study was carried out in a floodplain wetland planted with rice in North-west Tanzania- East Africa to determine the effects of different management practices and soil water regimes on paddy soil organic carbon and nitrogen. Four management treatments were compared: (i) control (non weeded plots); (ii) weeded plots; (iii) N fertilized plots, and (iv) non-cropped (non weeded plots). Two soil moisture regimes included soil under field capacity (rainfed conditions) and continuous water logging compared side-by-side. Soil were sampled at the start and end of the rice cropping seasons from the two fields differentiated by moisture regimes during the wet season 2012. The soils differed in the total organic carbon and nitrogen between the treatments. Soil management including weeding and fertilization is seen to affect soil carbon and nitrogen regardless of the soil moisture conditions. Particularly, the padddy soils were higher in the total organic carbon under continuous water logged field. These findings are preliminary and a more complete understanding of the relationships between management and soil moisture on the temporal changes of soil properties is required before making informed decisions on future wetland soil carbon and nitrogen dynamics. Keywords: Management, nitrogen, paddy soil, total carbon, Tanzania,

Processing of polarimetric SAR data for soil moisture estimation over Mahantango watershed area

NASA Technical Reports Server (NTRS)

Rao, K. S.; Teng, W. L.; Wang, J. R.

1992-01-01

Microwave remote sensing technique has a high potential for measuring soil moisture due to the large contrast in dielectric constant of dry and wet soils. Recent work by Pults et al. demonstrated the use of X/C-band data for quantitative surface soil moisture extraction from Airborne Synthetic Aperture Radar (SAR) system. Similar technique was adopted using polarimetric SAR data acquired with the JPL-AIRSAR system over the Mahantango watershed area in central Pennsylvania during July 1990. The data sets reported include C-, L-, and P-bands of 10, 13, 15, and 17 July 1990.

Phylogenetic and Functional Diversity of Total (DNA) and Expressed (RNA) Bacterial Communities in Urban Green Infrastructure Bioswale Soils.

PubMed

Gill, Aman S; Lee, Angela; McGuire, Krista L

2017-08-15

New York City (NYC) is pioneering green infrastructure with the use of bioswales and other engineered soil-based habitats to provide stormwater infiltration and other ecosystem functions. In addition to avoiding the environmental and financial costs of expanding traditional built infrastructure, green infrastructure is thought to generate cobenefits in the form of diverse ecological processes performed by its plant and microbial communities. Yet, although plant communities in these habitats are closely managed, we lack basic knowledge about how engineered ecosystems impact the distribution and functioning of soil bacteria. We sequenced amplicons of the 16S ribosomal subunit, as well as seven genes associated with functional pathways, generated from both total (DNA-based) and expressed (RNA) soil communities in the Bronx, NYC, NY, in order to test whether bioswale soils host characteristic bacterial communities with evidence for enriched microbial functioning, compared to nonengineered soils in park lawns and tree pits. Bioswales had distinct, phylogenetically diverse bacterial communities, including taxa associated with nutrient cycling and metabolism of hydrocarbons and other pollutants. Bioswale soils also had a significantly greater diversity of genes involved in several functional pathways, including carbon fixation ( cbbL-R [ cbbL gene, red-like subunit] and apsA ), nitrogen cycling ( noxZ and amoA ), and contaminant degradation ( bphA ); conversely, no functional genes were significantly more abundant in nonengineered soils. These results provide preliminary evidence that urban land management can shape the diversity and activity of soil communities, with positive consequences for genetic resources underlying valuable ecological functions, including biogeochemical cycling and degradation of common urban pollutants. IMPORTANCE Management of urban soil biodiversity by favoring taxa associated with decontamination or other microbial metabolic processes is a powerful prospect, but it first requires an understanding of how engineered soil habitats shape patterns of microbial diversity. This research adds to our understanding of urban microbial biogeography by providing data on soil bacteria in bioswales, which had relatively diverse and compositionally distinct communities compared to park and tree pit soils. Bioswales also contained comparatively diverse pools of genes related to carbon sequestration, nitrogen cycling, and contaminant degradation, suggesting that engineered soils may serve as effective reservoirs of functional microbial biodiversity. We also examined both total (DNA-based) and expressed (RNA) communities, revealing that total bacterial communities (the exclusive targets in the vast majority of soil studies) were poor predictors of expressed community diversity, pointing to the value of quantifying RNA, especially when ecological functioning is considered. Copyright © 2017 American Society for Microbiology.

Phylogenetic and Functional Diversity of Total (DNA) and Expressed (RNA) Bacterial Communities in Urban Green Infrastructure Bioswale Soils

PubMed Central

Lee, Angela; McGuire, Krista L.

2017-01-01

ABSTRACT New York City (NYC) is pioneering green infrastructure with the use of bioswales and other engineered soil-based habitats to provide stormwater infiltration and other ecosystem functions. In addition to avoiding the environmental and financial costs of expanding traditional built infrastructure, green infrastructure is thought to generate cobenefits in the form of diverse ecological processes performed by its plant and microbial communities. Yet, although plant communities in these habitats are closely managed, we lack basic knowledge about how engineered ecosystems impact the distribution and functioning of soil bacteria. We sequenced amplicons of the 16S ribosomal subunit, as well as seven genes associated with functional pathways, generated from both total (DNA-based) and expressed (RNA) soil communities in the Bronx, NYC, NY, in order to test whether bioswale soils host characteristic bacterial communities with evidence for enriched microbial functioning, compared to nonengineered soils in park lawns and tree pits. Bioswales had distinct, phylogenetically diverse bacterial communities, including taxa associated with nutrient cycling and metabolism of hydrocarbons and other pollutants. Bioswale soils also had a significantly greater diversity of genes involved in several functional pathways, including carbon fixation (cbbL-R [cbbL gene, red-like subunit] and apsA), nitrogen cycling (noxZ and amoA), and contaminant degradation (bphA); conversely, no functional genes were significantly more abundant in nonengineered soils. These results provide preliminary evidence that urban land management can shape the diversity and activity of soil communities, with positive consequences for genetic resources underlying valuable ecological functions, including biogeochemical cycling and degradation of common urban pollutants. IMPORTANCE Management of urban soil biodiversity by favoring taxa associated with decontamination or other microbial metabolic processes is a powerful prospect, but it first requires an understanding of how engineered soil habitats shape patterns of microbial diversity. This research adds to our understanding of urban microbial biogeography by providing data on soil bacteria in bioswales, which had relatively diverse and compositionally distinct communities compared to park and tree pit soils. Bioswales also contained comparatively diverse pools of genes related to carbon sequestration, nitrogen cycling, and contaminant degradation, suggesting that engineered soils may serve as effective reservoirs of functional microbial biodiversity. We also examined both total (DNA-based) and expressed (RNA) communities, revealing that total bacterial communities (the exclusive targets in the vast majority of soil studies) were poor predictors of expressed community diversity, pointing to the value of quantifying RNA, especially when ecological functioning is considered. PMID:28576763

Representing biophysical landscape interactions in soil models by bridging disciplines and scales.

NASA Astrophysics Data System (ADS)

van der Ploeg, M. J.; Carranza, C.; Teixeira da Silva, R.; te Brake, B.; Baartman, J.; Robinson, D.

2017-12-01

The combination of climate change, population growth and soil threats including carbon loss, biodiversity decline and erosion, increasingly confront the global community (Schwilch et al., 2016). One major challenge in studying processes involved in soil threats, landscape resilience, ecosystem stability, sustainable land management and resulting economic consequences, is that it is an interdisciplinary field (Pelletier et al., 2012). Less stringent scientific disciplinary boundaries are therefore important (Liu et al., 2007), because as a result of disciplinary focus, ambiguity may arise on the understanding of landscape interactions. This is especially true in the interaction between a landscape's physical and biological processes (van der Ploeg et al. 2012). Biophysical landscape interactions are those biotic and abiotic processes in a landscape that have an influence on the developments within and evolution of a landscape. An important aspect in biophysical landscape interactions is the differences in scale related to the various processes that play a role in these systems. Moreover, the interplay between the physical landscape and the occurring vegetation, which often co-evolve, and the resulting heterogeneity and emerging patterns are the reason why it is so challenging to establish a theoretical basis to describe biophysical processes in landscapes (e.g. te Brake et al. 2013, Robinson et al. 2016). Another complicating factor is the response of vegetation to changing environmental conditions, including a possible, and often unknown, time-lag (e.g. Metzger et al., 2009). An integrative description for modelling biophysical interactions has been a long standing goal in soil science (Vereecken et al., 2016). We need the development of soil models that are more focused on networks, connectivity and feedbacks incorporating the most important aspects of our detailed mechanistic modelling (Paola & Leeder, 2011). Additionally, remote sensing measurement techniques facilitate non-interfering observation of biophysical interactions on a landscape scale. A joint effort to connect Earth's (sub)surface processes by a combination of innovative big data-assimilation, measurement and modelling techniques will enable the scientific community to accurately address vital issues.

Liming impacts on soils, crops and biodiversity in the UK: A review.

PubMed

Holland, J E; Bennett, A E; Newton, A C; White, P J; McKenzie, B M; George, T S; Pakeman, R J; Bailey, J S; Fornara, D A; Hayes, R C

2018-01-01

Fertile soil is fundamental to our ability to achieve food security, but problems with soil degradation (such as acidification) are exacerbated by poor management. Consequently, there is a need to better understand management approaches that deliver multiple ecosystem services from agricultural land. There is global interest in sustainable soil management including the re-evaluation of existing management practices. Liming is a long established practice to ameliorate acidic soils and many liming-induced changes are well understood. For instance, short-term liming impacts are detected on soil biota and in soil biological processes (such as in N cycling where liming can increase N availability for plant uptake). The impacts of liming on soil carbon storage are variable and strongly relate to soil type, land use, climate and multiple management factors. Liming influences all elements in soils and as such there are numerous simultaneous changes to soil processes which in turn affect the plant nutrient uptake; two examples of positive impact for crops are increased P availability and decreased uptake of toxic heavy metals. Soil physical conditions are at least maintained or improved by liming, but the time taken to detect change varies significantly. Arable crops differ in their sensitivity to soil pH and for most crops there is a positive yield response. Liming also introduces implications for the development of different crop diseases and liming management is adjusted according to crop type within a given rotation. Repeated lime applications tend to improve grassland biomass production, although grassland response is variable and indirect as it relates to changes in nutrient availability. Other indicators of liming response in grassland are detected in mineral content and herbage quality which have implications for livestock-based production systems. Ecological studies have shown positive impacts of liming on biodiversity; such as increased earthworm abundance that provides habitat for wading birds in upland grasslands. Finally, understanding of liming impacts on soil and crop processes are explored together with functional aspects (in terms of ecosystems services) in a new qualitative framework that includes consideration of how liming impacts change with time. This holistic approach provides insights into the far-reaching impacts that liming has on ecosystems and the potential for liming to enhance the multiple benefits from agriculturally managed land. Recommendations are given for future research on the impact of liming and the implications for ecosystem services. Crown Copyright © 2017. Published by Elsevier B.V. All rights reserved.

Pyrogenic Carbon as a Nonlinear Driver in the Carbon and Nitrogen Cycles

NASA Astrophysics Data System (ADS)

Masiello, C. A.; Silberg, J. J.; Cheng, H. Y.; Gao, X.; Del Valle, I.

2016-12-01

Our first conceptual models of pyrogenic carbon's effects on the carbon cycle treated this material as a form of organic matter whose environmental residence time was long enough to render it inert, and PyC was modeled as an unreactive mass that moved through C cycle reservoirs essentially unmodified. This concept saw modifications with the recognition that some fractions of PyC were labile. For example, the reactive sugars and lignin monomers cleaved off the lignocellulose matrix by heating have lifetimes on the order of hours to weeks. However, the now-common multiple component model of PyC does not satisfactorily explain many nonlinearities that have been observed when it is added to soils. These nonlinearities include the positive and negative "priming" effects sometimes triggered, where the presence of PyC in some matrices can trigger shifts in the overall microbial community metabolism, as well as alteration of microbial community structure, shifts in the behavior of belowground and aboveground plant parasites, and shifted rates of greenhouse gas emissions that are not well-correlated to shifts in soil hydrologic processes. To understand the effects of PyC on the global C and N cycles, we will need a better understanding of the mechanisms behind PyC-driven C and N cycle nonlinearities. This talk will examine potential mechanisms driving the nonlinearities observed in soil systems following the introduction of PyC. Potential mechanisms discussed will include PyC effects on soil microbial communication and PyC effects on microbial electron transfer. Cell-cell communication through the secretion and detection of small molecules is used by soil microbes to manage many biogeochemically relevant processes including production of biofilms, production of extracellular enzymes, and management of methanogenesis and denitrification. PyC disrupts microbial cell-cell communication differentially, altering some species' ability to communicate more than others. Electron transfer between microbes is a central part of many environmental syntrophies, including those responsible for methanogenesis, and has been shown to be altered by the presence of PyC. Both these processes may underlie observed ecosystem-scale shifts following PyC amendment to soils.

Impact of biostimulated redox processes on metal dynamics in an iron-rich creek soil of a former uranium mining area.

PubMed

Burkhardt, Eva-Maria; Akob, Denise M; Bischoff, Sebastian; Sitte, Jana; Kostka, Joel E; Banerjee, Dipanjan; Scheinost, Andreas C; Küsel, Kirsten

2010-01-01

Understanding the dynamics of metals and radionuclides in soil environments is necessary for evaluating risks to pristine sites. An iron-rich creek soil of a former uranium-mining district (Ronneburg, Germany) showed high porewater concentrations of heavy metals and radionuclides. Thus, this study aims to (i) evaluate metal dynamics during terminal electron accepting processes (TEAPs) and (ii) characterize active microbial populations in biostimulated soil microcosms using a stable isotope probing (SIP) approach. In biostimulated soil slurries, concentrations of soluble Co, Ni, Zn, As, and unexpectedly U increased during Fe(III)-reduction. This suggests that there was a release of sorbed metals and As during reductive dissolution of Fe(III)-oxides. Subsequent sulfate-reduction was concurrent with a decrease of U, Co, Ni, and Zn concentrations. The relative contribution of U(IV) in the solid phase changed from 18.5 to 88.7% after incubation. The active Fe(III)-reducing population was dominated by delta-Proteobacteria (Geobacter) in (13)C-ethanol amended microcosms. A more diverse community was present in (13)C-lactate amended microcosms including taxa related to Acidobacteria, Firmicutes, delta-Proteobacteria, and beta-Proteobacteria. Our results suggested that biostimulated Fe(III)-reducing communities facilitated the release of metals including U to groundwater which is in contrast to other studies.

Aluminium Toxicity to Plants as Influenced by the Properties of the Root Growth Environment Affected by Other Co-Stressors: A Review.

PubMed

Siecińska, Joanna; Nosalewicz, Artur

Aluminium toxicity to crops depends on the acidity of the soil and specific plant resistance. However, it is also strongly affected by other environmental factors that have to be considered to properly evaluate the resultant effects on plants. Observed weather perturbations and predicted climate changes will increase the probability of co-occurrence of aluminium toxicity and other abiotic stresses.In this review the mechanisms of plant-aluminium interactions are shown to be influenced by soil mineral nutrients, heavy metals, organic matter, oxidative stress and drought. Described effects of aluminium toxicity include: root growth inhibition, reduction in the uptake of mineral nutrients resulting from the inhibition of transport processes through ion channels; epigenetic changes to DNA resulting in gene silencing. Complex processes occurring in the rhizosphere are highlighted, including the role of soil organic matter and aluminium detoxification by mucilage.There is a considerable research gap in the understanding of root growth in the soil environment in the presence of toxic aluminium concentrations as affected by interactions with abiotic stressors. This knowledge is important for the selection of feasible methods aimed at the reduction of negative consequences of crop production in acidic soils affected by adverse growth environment.

Playing with LISEM: Experiences from Norway

NASA Astrophysics Data System (ADS)

Greipsland, Inga; Krzeminska, Dominika

2017-04-01

Reducing soil loss from agricultural land is an important environmental challenge that is of relevance for both the European Soil Thematic Strategy (EC 2002) and the Water Framework Directive (EC 2000). Agricultural land in Norway is scarce, covering only around 3% of the total land area (The World Bank, 2015), which puts stress on preserving soil quality for food production. Additionally, reducing sediment loss is a national priority because of associated transport of pollutants such as phosphorous, which can cause eutrophication in nearby waterbodies. It is necessary to find tools that can estimate the effect of different scenarios on erosion processes on agricultural areas. We would like to present the challenges experienced and the results obtained by using LISEM (Limburg Soil Erosion Model) on the plot- subcatchment- and catchment scale in southeastern Norway. The agricultural catchment has been the subject of long-term monitoring of water quality. Challenges included spatial upscaling of local calibration, calibration on areas with very low soil loss rates and equifinality. In this poster, we want to facilitate a discussion about the possibilities of and limitations to the model for predicting hydrological and soil erosion processes at different scales.

Listeria monocytogenes, a down-to-earth pathogen

PubMed Central

Vivant, Anne-Laure; Garmyn, Dominique; Piveteau, Pascal

2013-01-01

Listeria monocytogenes is the causative agent of the food-borne life threatening disease listeriosis. This pathogenic bacterium received much attention in the endeavor of deciphering the cellular mechanisms that underlie the onset of infection and its ability to adapt to the food processing environment. Although information is available on the presence of L. monocytogenes in many environmental niches including soil, water, plants, foodstuff and animals, understanding the ecology of L. monocytogenes in outdoor environments has received less attention. Soil is an environmental niche of pivotal importance in the transmission of this bacterium to plants and animals. Soil composition, microbial communities and macrofauna are extrinsic edaphic factors that direct the fate of L. monocytogenes in the soil environment. Moreover, farming practices may further affect its incidence. The genome of L. monocytogenes presents an extensive repertoire of genes encoding transport proteins and regulators, a characteristic of the genome of ubiquitous bacteria. Postgenomic analyses bring new insights in the process of soil adaptation. In the present paper focussing on soil, we review these extrinsic and intrinsic factors that drive environmental adaptation of L. monocytogenes. PMID:24350062

Listeria monocytogenes, a down-to-earth pathogen.

PubMed

Vivant, Anne-Laure; Garmyn, Dominique; Piveteau, Pascal

2013-01-01

Listeria monocytogenes is the causative agent of the food-borne life threatening disease listeriosis. This pathogenic bacterium received much attention in the endeavor of deciphering the cellular mechanisms that underlie the onset of infection and its ability to adapt to the food processing environment. Although information is available on the presence of L. monocytogenes in many environmental niches including soil, water, plants, foodstuff and animals, understanding the ecology of L. monocytogenes in outdoor environments has received less attention. Soil is an environmental niche of pivotal importance in the transmission of this bacterium to plants and animals. Soil composition, microbial communities and macrofauna are extrinsic edaphic factors that direct the fate of L. monocytogenes in the soil environment. Moreover, farming practices may further affect its incidence. The genome of L. monocytogenes presents an extensive repertoire of genes encoding transport proteins and regulators, a characteristic of the genome of ubiquitous bacteria. Postgenomic analyses bring new insights in the process of soil adaptation. In the present paper focussing on soil, we review these extrinsic and intrinsic factors that drive environmental adaptation of L. monocytogenes.

Derivation of thermokarst distribution based on climate and surface characteristics

NASA Astrophysics Data System (ADS)

Schöngaßner, Thomas; Hagemann, Stefan

2013-04-01

About one quarter of the northern hemisphere is covered by permafrost. Permafrost areas inherit a high amount of deposited soil organic carbon, which represents approximately 50% of the estimated global below-ground organic carbon pool and is more than twice the size of the current atmospheric carbon pool. A destabilization due to the expected amplitude of future Arctic climate warming would lead to a global-scale feedback mechanism. This feedback comprise interactions between snow, permafrost, hydrology, and ecosystems, which include altered energy and water fluxes between atmosphere and land surface. The representation of permafrost related processes in GCMs and ESMs is still rudimentary and needs to be extended to improve the climate model performance in high latitudes. In this sense thermokarst processes should be included into JSBACH, the land-surface component of MPI-ESM. Initially, a 1-D scheme of thermal dynamics will be implemented into JSBACH, which fits into very recent developments with regards to permafrost melting and freezing (T. Blome; Ekici et al., in prep.) and a dynamical wetland scheme (Stacke and Hagemann, 2012). Structural improvements and new parametrization of the model are required with regard to heat and water flow (physical processes) and carbon and nitrogen dynamics (bio-geochemical processes). The implementation of a thermokarst module is one task within the EU project PAGE21 and is a joint activity between MPI-M Hamburg and MPI-BGC Jena. Thermokarst changes are coupled thermal-hydrological processes, which lead to an enhanced thawing of ice-rich permafrost on local-to-regional scales, where the soil structure is characterized by segregated ice and ice-wedges. They result in severe consequences for soil structure, hydrology, and depletion of soil organic carbon. Thermokarst affected areas appear as a very uneven surface of hummocks and marshy hollows. The initial heat balance of the surface is disturbed by different trigger mechanisms, which cause the ground ice to melt and the soil to subside into depressions due to developing cavities in the interior. The depressions fill up with melting and precipitating water. Since deeper water bodies do not freeze up entirely, the annual mean surface temperature increases in the soil beneath. Therefore permafrost thawing is continued and depressions grow further due to soil subsidence and slope wash at the margins until a new soil surface heat balance is reached. Here I'd like to give a short overview and an introduction into the ongoing thermokarst process in the Arctic tundra. The main focus will be on investigating the actual distribution of thermokarst lakes in the high northern latitudes. The development of thermokarst lakes depends on soil parameters like ice content, surface temperature, soil texture as well as on climate states like monthly mean temperature, precipitation, winter snow depth. They contribute to the surface heat balance and may serve as a measure for thermokarst potential. Since thermokarst mechanism is a small-scale process of 10-1000m in spatial extent, it needs to be parametrized for GCM applications on ESM grid scale. Thus, we want to derive the thermokarst distribution as a function of climate and soil parameters.

Development and validation of a solid phase extraction sample cleanup procedure for the recovery of trace levels of nitro-organic explosives in soil.

PubMed

Thomas, Jennifer L; Donnelly, Christopher C; Lloyd, Erin W; Mothershead, Robert F; Miller, Mark L

2018-03-01

An improved cleanup method has been developed for the recovery of trace levels of 12 nitro-organic explosives in soil, which is important not only for the forensic community, but also has environmental implications. A wide variety of explosives or explosive-related compounds were evaluated, including nitramines, nitrate esters, nitroaromatics, and a nitroalkane. Fortified soil samples were extracted with acetone, processed via solid phase extraction (SPE), and then analyzed by gas chromatography with electron capture detection. The following three SPE sorbents in cartridge format were compared: Empore™ SDB-XC, Oasis ® HLB, and Bond Elut NEXUS cartridges. The NEXUS cartridges provided the best overall recoveries for the 12 explosives in potting soil (average 48%) and the fastest processing times (<30min). It also rejected matrix components from spent motor oil on potting soil. The SPE method was validated by assessing limit of detection (LOD), processed sample stability, and interferences. All 12 compounds were detectable at 0.02μg explosive/gram of soil or lower in the three matrices tested (potting soil, sand, and loam) over three days. Seven explosives were stable up to seven days at 2μg/g and three were stable at 0.2μg/g, both in processed loam, which was the most challenging matrix. In the interference study, five interferences above the determined LOD for soil were detected in matrices collected across the United States and in purchased all-purpose sand, potting soil, and loam. This represented a 3.2% false positive rate for the 13 matrices processed by the screening method for interferences. The reported SPE cleanup method provides a fast and simple extraction process for separating organic explosives from matrix components, facilitating sample throughput and reducing instrument maintenance. In addition, a comparison study of the validated SPE method versus conventional syringe filtration was completed and highlighted the benefits of sample cleanup for removing matrix interferences, while also providing lower supply cost, order of magnitude lower LODs for most explosives, higher percent recoveries for complex matrices, and fewer instrument maintenance issues. Published by Elsevier B.V.

Spectral mapping of soil organic matter

NASA Technical Reports Server (NTRS)

Kristof, S. J.; Baumgardner, M. F.; Johannsen, C. J.

1974-01-01

Multispectral remote sensing data were examined for use in the mapping of soil organic matter content. Computer-implemented pattern recognition techniques were used to analyze data collected in May 1969 and May 1970 by an airborne multispectral scanner over a 40-km flightline. Two fields within the flightline were selected for intensive study. Approximately 400 surface soil samples from these fields were obtained for organic matter analysis. The analytical data were used as training sets for computer-implemented analysis of the spectral data. It was found that within the geographical limitations included in this study, multispectral data and automatic data processing techniques could be used very effectively to delineate and map surface soils areas containing different levels of soil organic matter.

Communities of microorganisms and invertebrates in soil-like bodies of soccer fields in Moscow oblast

NASA Astrophysics Data System (ADS)

Kutovaya, O. V.; Zamotaev, I. V.; Belobrov, V. P.

2014-11-01

Artificially created soil-like technogenic formations (STFs) of soccer fields are developed under combined action of intense technogenic and natural factors and processes, which cannot but affect the structure and biological activity of their microbial communities and mesofauna. The microflora of the STFs is very similar to the microflora of the background soddy-podzolic soils of Moscow oblast with respect to the composition of the physiological groups of microorganisms. However, they are drastically different in their quantitative characteristics. The numbers of all the trophic groups of microorganisms, except for the microscopic fungi, in the STFs are much higher than those in the zonal soils. An increased biological activity of the STFs is due to regular watering, heating, application of sand and mineral fertilizers, and technogenic turbation processes. The mesofauna of the STFs is represented by several ecological groups of earthworms, including soildwelling (endogeic) earthworms ( Aporrectodea caliginosa), epigeic earthworms dwelling at the soil-litter interface ( Lumbricus rubellus), and litter-dwelling earthworms ( Eisenia foetida).

Soil mapping and process modeling for sustainable land use management: a brief historical review

NASA Astrophysics Data System (ADS)

Brevik, Eric C.; Pereira, Paulo; Muñoz-Rojas, Miriam; Miller, Bradley A.; Cerdà, Artemi; Parras-Alcántara, Luis; Lozano-García, Beatriz

2017-04-01

Basic soil management goes back to the earliest days of agricultural practices, approximately 9,000 BCE. Through time humans developed soil management techniques of ever increasing complexity, including plows, contour tillage, terracing, and irrigation. Spatial soil patterns were being recognized as early as 3,000 BCE, but the first soil maps didn't appear until the 1700s and the first soil models finally arrived in the 1880s (Brevik et al., in press). The beginning of the 20th century saw an increase in standardization in many soil science methods and wide-spread soil mapping in many parts of the world, particularly in developed countries. However, the classification systems used, mapping scale, and national coverage varied considerably from country to country. Major advances were made in pedologic modeling starting in the 1940s, and in erosion modeling starting in the 1950s. In the 1970s and 1980s advances in computing power, remote and proximal sensing, geographic information systems (GIS), global positioning systems (GPS), and statistics and spatial statistics among other numerical techniques significantly enhanced our ability to map and model soils (Brevik et al., 2016). These types of advances positioned soil science to make meaningful contributions to sustainable land use management as we moved into the 21st century. References Brevik, E., Pereira, P., Muñoz-Rojas, M., Miller, B., Cerda, A., Parras-Alcantara, L., Lozano-Garcia, B. Historical perspectives on soil mapping and process modelling for sustainable land use management. In: Pereira, P., Brevik, E., Muñoz-Rojas, M., Miller, B. (eds) Soil mapping and process modelling for sustainable land use management (In press). Brevik, E., Calzolari, C., Miller, B., Pereira, P., Kabala, C., Baumgarten, A., Jordán, A. 2016. Historical perspectives and future needs in soil mapping, classification and pedological modelling, Geoderma, 264, Part B, 256-274.

Modelling hydrological conditions in the maritime forest region of south-western Nova Scotia

NASA Astrophysics Data System (ADS)

Yanni, Shelagh; Keys, Kevin; Meng, Fan-Rui; Yin, Xiwei; Clair, Tom; Arp, Paul A.

2000-02-01

Hydrological processes and conditions were quantified for the Mersey River Basin (two basins: one exiting below Mill Falls, and one exiting below George Lake), the Roger's Brook Basin, Moosepit Brook, and for other selected locations at and near Kejimkujik National Park in Nova Scotia, Canada, from 1967 to 1990. Addressed variables included precipitation (rain, snow, fog), air temperature, stream discharge, snowpack accumulations, throughfall, soil and subsoil moisture, soil temperature and soil frost, at a monthly resolution. It was found that monthly per hectare stream discharge was essentially independent of catchment area from <20 km2 to more than 1000 km2. The forest hydrology model ForHyM2 was used to simulate monthly rates of stream discharge, throughfall and snowpack water equivalents for mature forest conditions. These simulations were in good agreement with the historical records once the contributions of fog and mist to the area-wide water budget were taken into account, each on a monthly basis. The resulting simulations establish a hydrologically consistent, continuous, comprehensive and partially verified record for basin-wide outcomes for all major hydrological processes and conditions, be these related to stream discharge, soil moisture, soil temperature, snowpack accumulations, soil frost, throughfall, interception and soil percolation.

Analyzing water soluble soil organics as Trifluoroacetyl derivatives by liquid state proton nuclear magnetic resonance

Treesearch

Felipe Garza Sanchez; Zakiya Holmes Leggett; Sabapathy Sankar

2005-01-01

In forested ecosystems, water soluble organics play an important role in soil processes including carbon and nutrient turnover, microbial activity and pedogenesis. The quantity and quality (i.e., chemistry) of these materials is sensitive to land management practices. Monitoring alterations in the chemistry of water soluble organics resulting from land management...

The Effect of Elevated CO2 and O3 on Soil Nitrogen Inputs and Losses in a Soybean Agroecosystem in Illinois

USDA-ARS?s Scientific Manuscript database

It has been found that elevated atmospheric carbon dioxide (eCO2) and tropospheric ozone (eO3) affect belowground microbial processes, including N transformations, through plant-mediated changes. Conversely, changes in soil organic carbon sequestration and plant biomass production are constrained by...

Fire effects on water quality: a synthesis of response regulating factors among contrasting ecosystems

Treesearch

Katherine J. Elliott; James M. Vose

2006-01-01

The key components of watershed processes are inputs in precipitation, interactions of vegetation, soil and water including evapotranspiration (water yield), overland flow (erosion), and storage and filtering (nutrients), and outputs in streamflow. Fire effects occur at the vegetation-soil interface and can result in altering overland flow and infiltration rate of...

Stomatal conductance, canopy temperature, and leaf area index estimation using remote sensing and OBIA techniques

Treesearch

S. Panda; D.M. Amatya; G. Hoogenboom

2014-01-01

Remotely sensed images including LANDSAT, SPOT, NAIP orthoimagery, and LiDAR and relevant processing tools can be used to predict plant stomatal conductance (gs), leaf area index (LAI), and canopy temperature, vegetation density, albedo, and soil moisture using vegetation indices like normalized difference vegetation index (NDVI) or soil adjusted...

One plant, two plants, three plants, four: does soil carbon respond to diversifying by one plant more? (Invited)

NASA Astrophysics Data System (ADS)

Grandy, S.

2013-12-01

Plant diversity is known to strongly influence aboveground ecosystem functions, but our understanding of its effects on belowground carbon (C) cycling has not kept pace. We know in broad terms that the belowground implications of reducing plant diversity include changes in soil nutrient cycling and biological communities, but remain uncertain about the specific links between plant diversity, soil microbial communities, and soil C cycling. Our knowledge gap is especially wide in agricultural systems, which comprise ~50% of the contiguous U.S. and differ from non-managed systems because diversity: (1) occurs primarily over time (i.e. crop rotations) rather than in space (i.e. inter-cropping); (2) exists as one of multiple management factors that potentially regulates soil C dynamics; and (3) is almost always low, with the addition or subtraction of a single plant species often representing a substantial change in diversity. I have been addressing the uncertain relationships between agricultural plant diversity and soil C cycling with a multi-tiered approach that includes a global meta-analysis, site-specific field manipulations, and intensive laboratory analyses. The meta-analysis using 122 studies shows that compared to single-crop monocultures, rotations increased soil microbial biomass C by 20.7% and microbial biomass N by 26.1% as well as total soil C and N. In a complimentary field study at the W.K. Kellogg Biological Station LTER Cropping Biodiversity Gradient Experiment we examined microbial communities, C cycling processes, and trace gas emissions in five rotation sequences varying in complexity from continuous corn monoculture to a five crop three-year rotation. Finding striking differences between monocultures and systems with more complex plant communities, these results confirm our meta-analysis, and highlight the strong effects of diversifying plant communities in agricultural systems. A complimentary lab study examining decomposition processes in monocultures and more diverse rotations shows that rotation soils process chemically complex C more rapidly. My studies point to complex relationships between the chemistry of substrate inputs and their fate in soils, while also emphasizing an important management consideration: maintaining soil biological functions and ecosystem services in managed agricultural systems requires the rotation of different crops, rather than the production of single crop monocultures.

Selected micrometeorological, soil-moisture, and evapotranspiration data at Amargosa Desert Research Site in Nye County near Beatty, Nevada, 2001-05

USGS Publications Warehouse

Johnson, Michael J.; Mayers, C. Justin; Garcia, C. Amanda; Andraski, Brian J.

2007-01-01

Selected micrometeorological and soil-moisture data were collected at the Amargosa Desert Research Site adjacent to a low-level radio-active waste and hazardous chemical waste facility near Beatty, Nevada, 2001-05. Evapotranspiration data were collected from February 2002 through the end of December 2005. Data were col-lected in support of ongoing research to improve the understanding of hydrologic and contaminant-transport processes in arid environments. Micrometeorological data include solar radiation, net radiation, air temperature, relative humidity, saturated and ambient vapor pressure, wind speed and direction, barometric pressure, precipitation, near-surface soil temperature, soil-heat flux and soil-water content. All micrometeorological data were collected using a 10-second sampling interval by data loggers that output daily and hourly mean values. Daily maximum and minimum values are based on hourly mean values. Precipitation data output includes daily and hourly totals. Selected soil-moisture profiles at depth include periodic measurements of soil volumetric water-content measurements at nine neutron-probe access tubes to depths ranging from 5.25 to 29.25 meters. Evapotranspiration data include measurement of daily evapotranspiration and 15-minute fluxes of the four principal energy budget components of latent-heat flux, sensible-heat flux, soil-heat flux, and net radiation. Other data collected and used in equations to determine evapotranspiration include temperature and water content of soil, temperature and vapor pressure of air, and covariance values. Evapotranspiration and flux estimates during 15-minute intervals were calculated at a 0.1-second execution interval using the eddy covariance method. Data files included in this report contain the complete micrometeorological, soil-moisture, and evapotranspiration field data sets. These data files are presented in tabular Excel spreadsheet format. This report highlights selected data contained in the computer generated data files using figures, tables, and brief discussions. Instrumentation used for data collection also is described. Water-content profiles are shown to demonstrate variability of water content with depth. Time-series data are plotted to illustrate temporal variations in micrometeorological, soil-water content, and evapotranspiration data.

The formation and fate of chlorinated organic substances in temperate and boreal forest soils.

PubMed

Clarke, Nicholas; Fuksová, Kvetoslava; Gryndler, Milan; Lachmanová, Zora; Liste, Hans-Holger; Rohlenová, Jana; Schroll, Reiner; Schröder, Peter; Matucha, Miroslav

2009-03-01

Chlorine is an abundant element, commonly occurring in nature either as chloride ions or as chlorinated organic compounds (OCls). Chlorinated organic substances were long considered purely anthropogenic products; however, they are, in addition, a commonly occurring and important part of natural ecosystems. Formation of OCls may affect the degradation of soil organic matter (SOM) and thus the carbon cycle with implications for the ability of forest soils to sequester carbon, whilst the occurrence of potentially toxic OCls in groundwater aquifers is of concern with regard to water quality. It is thus important to understand the biogeochemical cycle of chlorine, both inorganic and organic, to get information about the relevant processes in the forest ecosystem and the effects on these from human activities, including forestry practices. A survey is given of processes in the soil of temperate and boreal forests, predominantly in Europe, including the participation of chlorine, and gaps in knowledge and the need for further work are discussed. Chlorine is present as chloride ion and/or OCls in all compartments of temperate and boreal forest ecosystems. It contributes to the degradation of SOM, thus also affecting carbon sequestration in the forest soil. The most important source of chloride to coastal forest ecosystems is sea salt deposition, and volcanoes and coal burning can also be important sources. Locally, de-icing salt can be an important chloride input near major roads. In addition, anthropogenic sources of OCls are manifold. However, results also indicate the formation of chlorinated organics by microorganisms as an important source, together with natural abiotic formation. In fact, the soil pool of OCls seems to be a result of the balance between chlorination and degradation processes. Ecologically, organochlorines may function as antibiotics, signal substances and energy equivalents, in descending order of significance. Forest management practices can affect the chlorine cycle, although little is at present known about how. The present data on the apparently considerable size of the pool of OCls indicate its importance for the functioning of the forest soil system and its stability, but factors controlling their formation, degradation and transport are not clearly understood. It would be useful to estimate the significance and rates of key processes to be able to judge the importance of OCls in SOM and litter degradation. Effects of forest management processes affecting SOM and chloride deposition are likely to affect OCls as well. Further standardisation and harmonisation of sampling and analytical procedures is necessary. More work is necessary in order to understand and, if necessary, develop strategies for mitigating the environmental impact of OCls in temperate and boreal forest soils. This includes both intensified research, especially to understand the key processes of formation and degradation of chlorinated compounds, and monitoring of the substances in question in forest ecosystems. It is also important to understand the effect of various forest management techniques on OCls, as management can be used to produce desired effects.

Evaluation of different field methods for measuring soil water infiltration

NASA Astrophysics Data System (ADS)

Pla-Sentís, Ildefonso; Fonseca, Francisco

2010-05-01

Soil infiltrability, together with rainfall characteristics, is the most important hydrological parameter for the evaluation and diagnosis of the soil water balance and soil moisture regime. Those balances and regimes are the main regulating factors of the on site water supply to plants and other soil organisms and of other important processes like runoff, surface and mass erosion, drainage, etc, affecting sedimentation, flooding, soil and water pollution, water supply for different purposes (population, agriculture, industries, hydroelectricity), etc. Therefore the direct measurement of water infiltration rates or its indirect deduction from other soil characteristics or properties has become indispensable for the evaluation and modelling of the previously mentioned processes. Indirect deductions from other soil characteristics measured under laboratory conditions in the same soils, or in other soils, through the so called "pedo-transfer" functions, have demonstrated to be of limited value in most of the cases. Direct "in situ" field evaluations have to be preferred in any case. In this contribution we present the results of past experiences in the measurement of soil water infiltration rates in many different soils and land conditions, and their use for deducing soil water balances under variable climates. There are also presented and discussed recent results obtained in comparing different methods, using double and single ring infiltrometers, rainfall simulators, and disc permeameters, of different sizes, in soils with very contrasting surface and profile characteristics and conditions, including stony soils and very sloping lands. It is concluded that there are not methods universally applicable to any soil and land condition, and that in many cases the results are significantly influenced by the way we use a particular method or instrument, and by the alterations in the soil conditions by the land management, but also due to the manipulation of the surface soil before and during the measurement. Due to the commonly found high variability, natural or induced by land management, of the soil surface and subsurface hydrological properties, and to the limitations imposed by the requirements of water for the measurements, there is proposed a simple and handy method, which do not use high volumes of water, adaptable to very different soil and land conditions, and that allow many repeated measurements with acceptable accuracy for most of the purposes. References Pla, I., 1997. A soil water balance model for monitoring soil erosion processes and effects on steep lands in the tropics. Soil Technology. 11(1):17-30. Elsevier Pla, I., 2006. Hydrological approach for assessing desertification processes in the Mediterranean region. In W.G. Kepner et al. (Editors), Desertification in the Mediterranean Region. A Security Issue. 579-600 Springer. Heidelberg (Germany) Reynolds W.D., B.T. Bowman, R.R. Brunke, C.F. Drury and C.S. Tan. 2000. Comparison of Tension Infiltrometer, Pressure Infiltrometer, and Soil Core Estimates of Saturated Hydraulic Conductivity . Soil Science Society of America Journal 64:478-484 Segal, E., S.A.Bradford, P. Shouse; N. Lazarovich, and D. Corwin. 2008. Integration of Hard and Soft Data to Characterize Field-Scale Hydraulic Properties for Flow and Transport Studies. Vadose Zone J 7:878-889 Young, E. 1991. Infiltration measurements, a review. Hydrological processes 5: 309-320.

The CO2 emission in urbanic soils in the conditions of intensive technogenic pollution

NASA Astrophysics Data System (ADS)

Deviatova, Tatiana; Alaeva, Liliia; Negrobova, Elena; Kramareva, Tatiana

2017-04-01

Massive industrial pollution of the environment including soils leads to drastic changes in the vital activity of microorganisms, plants and animals. As objects of research was selected soils of the industrial and residential zones, farmland soils, forest soils. Comparative analysis showed that the emission of CO2 urbanizable increase compared to the suburban soils in recreational areas is 1.5 times, in the residential and industrial zones - in 3-5 times. In addition, identified a local point located in the vicinity of chemical plants, where soil CO2 emission increased up to 40 times compared to the suburban soils. Air technogenic pollution of soils by industrial emissions and transport enhances the mineralization of soil organic matter, increases its lability. These trends are associated with nonspecific adaptive reactions of the soil microbial complex in terms of pollution. Strengthening of the processes of mineralization may be due to the increase in the proportion of fungi in the microbial community. According to numerous reports they are more resistant to pollution compared to bacteria and actinomycetes. Admission to the soil organic matter of anthropogenic origin also increases the process of mineralization. According to the findings, low concentrations of petroleum products lead to increased "breathing" of the soil. Strengthening of the processes of mineralization and, consequently, of CO2 emissions, in the conditions of technogenic pollution of the soils identified in our studies, confirmed by numerous studies by other authors. According to reports in Russia the emission of CO2 from soils is 4.5 times higher than the industrial receipt of its atmosphere. The contribution of local anthropogenic CO2 emissions is not so significant compared to the indirect influence of soil pollution on increased CO2 emissions. Consequently, the expansion of technogenic contaminated soil is becoming a more significant factor adversely affecting the state of the atmosphere. Thus, the technogenic impact on the soil cover of the city greatly affects the emission of CO2 from the soil. Increasing in industrially polluted soils is associated with increased mineralization of organic matter and degradation of humus. You can put that in terms of pollution, increased carbon loss depends on changes in the metabolism of soil organisms.

Modelling carbon and nitrogen turnover in variably saturated soils

NASA Astrophysics Data System (ADS)

Batlle-Aguilar, J.; Brovelli, A.; Porporato, A.; Barry, D. A.

2009-04-01

Natural ecosystems provide services such as ameliorating the impacts of deleterious human activities on both surface and groundwater. For example, several studies have shown that a healthy riparian ecosystem can reduce the nutrient loading of agricultural wastewater, thus protecting the receiving surface water body. As a result, in order to develop better protection strategies and/or restore natural conditions, there is a growing interest in understanding ecosystem functioning, including feedbacks and nonlinearities. Biogeochemical transformations in soils are heavily influenced by microbial decomposition of soil organic matter. Carbon and nutrient cycles are in turn strongly sensitive to environmental conditions, and primarily to soil moisture and temperature. These two physical variables affect the reaction rates of almost all soil biogeochemical transformations, including microbial and fungal activity, nutrient uptake and release from plants, etc. Soil water saturation and temperature are not constants, but vary both in space and time, thus further complicating the picture. In order to interpret field experiments and elucidate the different mechanisms taking place, numerical tools are beneficial. In this work we developed a 3D numerical reactive-transport model as an aid in the investigation the complex physical, chemical and biological interactions occurring in soils. The new code couples the USGS models (MODFLOW 2000-VSF, MT3DMS and PHREEQC) using an operator-splitting algorithm, and is a further development an existing reactive/density-dependent flow model PHWAT. The model was tested using simplified test cases. Following verification, a process-based biogeochemical reaction network describing the turnover of carbon and nitrogen in soils was implemented. Using this tool, we investigated the coupled effect of moisture content and temperature fluctuations on nitrogen and organic matter cycling in the riparian zone, in order to help understand the relative sensitivity of biological transformations to these processes.

[Effects of soil trituration size on adsorption of oxytetracycline on soils].

PubMed

Qi, Rui-Huan; Li, Zhao-Jun; Long, Jian; Fan, Fei-Fei; Liang, Yong-Chao

2011-02-01

In order to understand the effects of soil trituration size on adsorption of oxytetracycline (OTC) on soils, two contrasting soils including moisture soil and purplish soil were selected to investigate adsorption of OTC on these soils, at the scales of no more than 0.20 mm, 0.84 mm, 0.25 mm and 0.15 mm, using the method of batch equilibrium experiments respectively. The results presented as the following: (1) Adsorption amount of OTC on moisture soil and purplish soil increased with the sampling time, and reached to equilibration at 24 h. First-order kinetic model, second-order kinetic model, parabolic-diffusion kinetic model, Elovich kinetic model, and two-constant kinetic model could be used to fit the changes in adsorption on soils with sampling time. Adsorption of OTC on two soils consisted of two processes such as quick adsorption and slow adsorption. Quick adsorption process happened during the period of 0-0.5 h. The adsorption rates of OTC on soils were higher at the small trituration size than those at the large trituration size, and at the same trituration size, the k(f) of purplish soil was about two times higher than those of moisture soil. (2) Adsorption isotherms of OTC on two soils with different trituration sizes were deviated from the linear model. The data were fitted well to Freundlich and Langmuir models, with the correlation coefficients between 0.956 and 0.999. The values of k(f) and q(m) for purplish soil were higher than those for moisture soil. At the same soil, adsorption amount of OTC increased with the decreases of soil trituration size. The results suggested that it is important to select the appropriate trituration size, based on the physical and chemical properties such as soil particle composition and so on, when the fate of antibiotics on soils was investigated.

Earthworms and priming of soil organic matter - The impact of food sources, food preferences and fauna - microbiota interactions

NASA Astrophysics Data System (ADS)

Potthoff, Martin; Wichern, Florian; Dyckmans, Jens; Joergensen, Rainer Georg

2016-04-01

Earthworms deeply interact with the processes of soil organic matter turnover in soil. Stabilization of carbon by soil aggregation and in the humus fraction of SOM are well known processes related to earthworm activity and burrowing. However, recent research on priming effects showed inconsistent effects for the impact of earthworm activity. Endogeic earthworms can induce apparent as well as true positive priming effects. The main finding is almost always that earthworm increase the CO2 production from soil. The sources of this carbon release can vary and seem to depend on a complex interaction of quantity and quality of available carbon sources including added substrates like straw or other compounds, food preferences and feeding behavior of earthworms, and soil properties. Referring to recent studies on earthworm effects on soil carbon storage and release (mainly Eck et al. 2015 Priming effects of Aporrectodea caliginosa on young rhizodeposits and old soil organic matter following wheat straw addition, European Journal of Soil Biology 70:38-45; Zareitalabad et al. 2010 Decomposition of 15N-labelled maize leaves in soil affected by endogeic geophagous Aporrectodea caliginosa, Soil Biology and Biochemistry 42(2):276-282; and Potthoff et al. 2001 Short-term effects of earthworm activity and straw amendment on the microbial C and N turnover in a remoistened arable soil after summer drought, Soil Biology and Biochemistry 33(4):583-591) we summaries the knowledge on earthworms and priming and come up with a conceptual approach and further research needs.

Transport mechanisms of soil-bound mercury in the erosion process during rainfall-runoff events.

PubMed

Zheng, Yi; Luo, Xiaolin; Zhang, Wei; Wu, Xin; Zhang, Juan; Han, Feng

2016-08-01

Soil contamination by mercury (Hg) is a global environmental issue. In watersheds with a significant soil Hg storage, soil erosion during rainfall-runoff events can result in nonpoint source (NPS) Hg pollution and therefore, can extend its environmental risk from soils to aquatic ecosystems. Nonetheless, transport mechanisms of soil-bound Hg in the erosion process have not been explored directly, and how different fractions of soil organic matter (SOM) impact transport is not fully understood. This study investigated transport mechanisms based on rainfall-runoff simulation experiments. The experiments simulated high-intensity and long-duration rainfall conditions, which can produce significant soil erosion and NPS pollution. The enrichment ratio (ER) of total mercury (THg) was the key variable in exploring the mechanisms. The main study findings include the following: First, the ER-sediment flux relationship for Hg depends on soil composition, and no uniform ER-sediment flux function exists for different soils. Second, depending on soil composition, significantly more Hg could be released from a less polluted soil in the early stage of large rainfall events. Third, the heavy fraction of SOM (i.e., the remnant organic matter coating on mineral particles) has a dominant influence on the enrichment behavior and transport mechanisms of Hg, while clay mineral content exhibits a significant, but indirect, influence. The study results imply that it is critical to quantify the SOM composition in addition to total organic carbon (TOC) for different soils in the watershed to adequately model the NPS pollution of Hg and spatially prioritize management actions in a heterogeneous watershed. Copyright © 2016 Elsevier Ltd. All rights reserved.

Informing soil models using pedotransfer functions: challenges and perspectives

NASA Astrophysics Data System (ADS)

Pachepsky, Yakov; Romano, Nunzio

2015-04-01

Pedotransfer functions (PTFs) are empirical relationships between parameters of soil models and more easily obtainable data on soil properties. PTFs have become an indispensable tool in modeling soil processes. As alternative methods to direct measurements, they bridge the data we have and data we need by using soil survey and monitoring data to enable modeling for real-world applications. Pedotransfer is extensively used in soil models addressing the most pressing environmental issues. The following is an attempt to provoke a discussion by listing current issues that are faced by PTF development. 1. As more intricate biogeochemical processes are being modeled, development of PTFs for parameters of those processes becomes essential. 2. Since the equations to express PTF relationships are essentially unknown, there has been a trend to employ highly nonlinear equations, e.g. neural networks, which in theory are flexible enough to simulate any dependence. This, however, comes with the penalty of large number of coefficients that are difficult to estimate reliably. A preliminary classification applied to PTF inputs and PTF development for each of the resulting groups may provide simple, transparent, and more reliable pedotransfer equations. 3. The multiplicity of models, i.e. presence of several models producing the same output variables, is commonly found in soil modeling, and is a typical feature in the PTF research field. However, PTF intercomparisons are lagging behind PTF development. This is aggravated by the fact that coefficients of PTF based on machine-learning methods are usually not reported. 4. The existence of PTFs is the result of some soil processes. Using models of those processes to generate PTFs, and more general, developing physics-based PTFs remains to be explored. 5. Estimating the variability of soil model parameters becomes increasingly important, as the newer modeling technologies such as data assimilation, ensemble modeling, and model abstraction, become progressively more popular. The variability PTFs rely on the spatio-temporal dynamics of soil variables, and that opens new sources of PTF inputs stemming from technology advances such as monitoring networks, remote and proximal sensing, and omics. 6. Burgeoning PTF development has not so far affected several persisting regional knowledge gaps. Remarkably little effort was put so far into PTF development for saline soils, calcareous and gypsiferous soils, peat soils, paddy soils, soils with well expressed shrink-swell behavior, and soils affected by freeze-thaw cycles. 7. Soils from tropical regions are quite often considered as a pseudo-entity for which a single PTF can be applied. This assumption will not be needed as more regional data will be accumulated and analyzed. 8. Other advances in regional PTFs will be possible due to presence of large databases on region-specific useful PTF inputs such as moisture equivalent, laser diffractometry data, or soil specific surface. 9. Most of flux models in soils, be it water, solutes, gas, or heat, involve parameters that are scale-dependent. Including scale dependencies in PTFs will be critical to improve PTF usability. 10. Another scale-related matter is pedotransfer for coarse-scale soil modeling, for example, in weather or climate models. Soil hydraulic parameters in these models cannot be measured and the efficiency of the pedotransfer can be evaluated only in terms of its utility. There is a pressing need to determine combinations of pedotransfer and upscaling procedures that can lead to the derivation of suitable coarse-scale soil model parameters. 11. The spatial coarse scale often assumes a coarse temporal support, and that may lead to including in PTFs other environmental variables such as topographic, weather, and management attributes. 12. Some PTF inputs are time- or space-dependent, and yet little is known whether the spatial or temporal structure of PTF outputs is properly predicted from such inputs 13. Further exploration is needed to use PTF as a source of hypotheses on and insights into relationships between soil processes and soil composition as well as between soil structure and soil functioning. PTFs are empirical relationships and their accuracy outside the database used for the PTF development is essentially unknown. Therefore they should never be considered as an ultimate source of parameters in soil modeling. Rather they strive to provide a balance between accuracy and availability. The primary role of PTF is to assist in modeling for screening and comparative purposes, establishing ranges and/or probability distributions of model parameters, and creating realistic synthetic soil datasets and scenarios. Developing and improving PTFs will remain the mainstream way of packaging data and knowledge for applications of soil modeling.

Biological soil crusts as an organizing principle in drylands: Chapter 1

USGS Publications Warehouse

Belnap, Jayne; Weber, Bettina; Büdel, Burkhard; Weber, Bettina; Buedel, Burkhard; Belnap, Jayne

2016-01-01

Biological soil crusts (biocrusts) have been present on Earth’s terrestrial surfaces for billions of years. They are a critical part of ecosystem processes in dryland regions, as they cover most of the soil surface and thus mediate almost all inputs and outputs from soils in these areas. There are many intriguing, but understudied, roles these communities may play in drylands. These include their function in nutrient capture and transformation, influence on the movement and distribution of nutrients and water within dryland soils, ability to structure vascular plant communities, role in creating biodiversity hotspots, and the possibility that they can be used as indicators of soil health. There are still many fascinating aspects of these communities that need study, and we hope that this chapter will facilitate such efforts.

Effects of an invasive plant species, celastrus orbiculatus, on soil composition and processes

USGS Publications Warehouse

Leicht-Young, S. A.; O'Donnell, H.; Latimer, A.M.; Silander, J.A.

2009-01-01

Celastrus orbiculatus is a non-native, invasive liana that was introduced to the United States in the 1860s and has spread rapidly throughout the Northeast Several attributes contribute to the invasiveness of C. orbiculatus, including tolerance to a wide range of light levels and habitat types. We compared soil characteristics in seven sets of adjacent, paired plots, spanning a range of habitats and soil types, with and without C. orbiculatus. The paired plots were similar other than the presence or absence of Celastrus. Plots with C. orbiculatus had significantly higher soil pH, potassium, calcium and magnesium levels. Furthermore, nitrogen mineralization and litter decomposition rates were higher in plots with C. orbiculatus. Phosphorus levels were not significantly different between the paired plots. The results of this study contribute to the growing body of research of the effects of invasive species on ecosystem processes.

Identifying the microbial taxa that consistently respond to soil warming across time and space.

PubMed

Oliverio, Angela M; Bradford, Mark A; Fierer, Noah

2017-05-01

Soil microbial communities are the key drivers of many terrestrial biogeochemical processes. However, we currently lack a generalizable understanding of how these soil communities will change in response to predicted increases in global temperatures and which microbial lineages will be most impacted. Here, using high-throughput marker gene sequencing of soils collected from 18 sites throughout North America included in a 100-day laboratory incubation experiment, we identified a core group of abundant and nearly ubiquitous soil microbes that shift in relative abundance with elevated soil temperatures. We then validated and narrowed our list of temperature-sensitive microbes by comparing the results from this laboratory experiment with data compiled from 210 soils representing multiple, independent global field studies sampled across spatial gradients with a wide range in mean annual temperatures. Our results reveal predictable and consistent responses to temperature for a core group of 189 ubiquitous soil bacterial and archaeal taxa, with these taxa exhibiting similar temperature responses across a broad range of soil types. These microbial 'bioindicators' are useful for understanding how soil microbial communities respond to warming and to discriminate between the direct and indirect effects of soil warming on microbial communities. Those taxa that were found to be sensitive to temperature represented a wide range of lineages and the direction of the temperature responses were not predictable from phylogeny alone, indicating that temperature responses are difficult to predict from simply describing soil microbial communities at broad taxonomic or phylogenetic levels of resolution. Together, these results lay the foundation for a more predictive understanding of how soil microbial communities respond to soil warming and how warming may ultimately lead to changes in soil biogeochemical processes. © 2016 John Wiley & Sons Ltd.

Dynamics of Soil Organic Carbon and Microbial Biomass Carbon in Relation to Water Erosion and Tillage Erosion

PubMed Central

Xiaojun, Nie; Jianhui, Zhang; Zhengan, Su

2013-01-01

Dynamics of soil organic carbon (SOC) are associated with soil erosion, yet there is a shortage of research concerning the relationship between soil erosion, SOC, and especially microbial biomass carbon (MBC). In this paper, we selected two typical slope landscapes including gentle and steep slopes from the Sichuan Basin, China, and used the 137Cs technique to determine the effects of water erosion and tillage erosion on the dynamics of SOC and MBC. Soil samples for the determination of 137Cs, SOC, MBC and soil particle-size fractions were collected on two types of contrasting hillslopes. 137Cs data revealed that soil loss occurred at upper slope positions of the two landscapes and soil accumulation at the lower slope positions. Soil erosion rates as well as distribution patterns of the <0.002-mm clay shows that water erosion is the major process of soil redistribution in the gentle slope landscape, while tillage erosion acts as the dominant process of soil redistribution in the steep slope landscape. In gentle slope landscapes, both SOC and MBC contents increased downslope and these distribution patterns were closely linked to soil redistribution rates. In steep slope landscapes, only SOC contents increased downslope, dependent on soil redistribution. It is noticeable that MBC/SOC ratios were significantly lower in gentle slope landscapes than in steep slope landscapes, implying that water erosion has a negative effect on the microbial biomass compared with tillage erosion. It is suggested that MBC dynamics are closely associated with soil redistribution by water erosion but independent of that by tillage erosion, while SOC dynamics are influenced by soil redistribution by both water erosion and tillage erosion. PMID:23717530

Biological Chlorine Cycling in Arctic Peat Soils

NASA Astrophysics Data System (ADS)

Zlamal, J. E.; Raab, T. K.; Lipson, D.

2014-12-01

Soils of the Arctic tundra near Barrow, Alaska are waterlogged and anoxic throughout most of the profile due to underlying permafrost. Microbial communities in these soils are adapted for the dominant anaerobic conditions and are capable of a surprising diversity of metabolic pathways. Anaerobic respiration in this environment warrants further study, particularly in the realm of electron cycling involving chlorine, which preliminary data suggest may play an important role in arctic anaerobic soil respiration. For decades, Cl was rarely studied outside of the context of solvent-contaminated sites due to the widely held belief that it is an inert element. However, Cl has increasingly become recognized as a metabolic player in microbial communities and soil cycling processes. Organic chlorinated compounds (Clorg) can be made by various organisms and used metabolically by others, such as serving as electron acceptors for microbes performing organohalide respiration. Sequencing our arctic soil samples has uncovered multiple genera of microorganisms capable of participating in many Cl-cycling processes including organohalide respiration, chlorinated hydrocarbon degradation, and perchlorate reduction. Metagenomic analysis of these soils has revealed genes for key enzymes of Cl-related metabolic processes such as dehalogenases and haloperoxidases, and close matches to genomes of known organohalide respiring microorganisms from the Dehalococcoides, Dechloromonas, Carboxydothermus, and Anaeromyxobacter genera. A TOX-100 Chlorine Analyzer was used to quantify total Cl in arctic soils, and these data were examined further to separate levels of inorganic Cl compounds and Clorg. Levels of Clorg increased with soil organic matter content, although total Cl levels lack this trend. X-ray Absorption Near Edge Structure (XANES) was used to provide information on the structure of Clorg in arctic soils, showing great diversity with Cl bound to both aromatic and alkyl groups. Incubations were conducted in the laboratory providing arctic soils with Clorg, and measurements taken to assess rates of organohalide respiration show an increase in chloride production due to microbial activity. Investigating these soils with diverse techniques affirms the importance of Cl-cycling in a pristine arctic tundra ecosystem.

Nitrogen amendments have predictable effects on soil microbial communities and processes

NASA Astrophysics Data System (ADS)

Ramirez, K. S.; Craine, J. M.; Fierer, N.

2011-12-01

Ecosystems worldwide are receiving increasing amounts of reactive nitrogen (N) through anthropogenic activities. While there has been much effort devoted to quantifying aboveground impacts of anthropogenic N effects, less work has focused on identifying belowground impacts. Bacteria play critical roles in ecosystem processes and identifying how anthropogenic N impacts bacterial communities may elucidate how critical microbially-mediated ecosystem functions are altered by N additions. In order to connect changes in soil processes to changes in the microbial community, we need to first determine if the changes are consistent across different soil types and ecosystems. We assessed the patterns of N effects across a variety of ecosystems in two ways. First, utilizing long-term experimental N gradients at Cedar Creek LTER, MN and Kellogg Biological Station LTER, MI, we examined the response of microbial communities to anthropogenic N additions. Using high-throughput pyrosequencing techniques we quantified changes in soil microbial communities across the nitrogen gradients. We observed strong directional shifts in community composition at both sites; N fertilization consistently impacted both the phylogenetic and taxonomic structure of soil bacterial community structure in a predictable manner regardless of ecosystem type. For example, at both sites Acidobacteria experienced significant declines as nitrogen increased, while other groups such as Actinobacteria and Bacteroidetes increased in relative abundance. Our results suggest that bacterial communities across these N fertility gradients are structured by either nitrogen and/or soil carbon availability, rather than by shifts in the plant community or soil pH indirectly associated with the elevated nitrogen inputs. Still, this field-work does not incorporate changes in soil processes (e.g. soil respiration) or microbial activity (e.g. microbial biomass and extracellular enzyme activity), or separate N from C effects. To address these factors, we performed a lab experiment, amending 30 soils collected from across North America with inorganic N. From this year-long incubation we obtained soil respiration, microbial biomass, bacterial community and extracellular enzyme activity measurements. Across all soil types we consistently observed a significant decrease in both soil respiration, approximately 10%, and microbial biomass, approximately 35%. Using high-throughput pyrosequencing we identified seven bacterial groups that responded significantly to the N additions, including those observed in our field survey. Together, this work suggests that increases in soil N shifts the functional capabilities of the microbial community and highlights possibly mechanisms behind the observed changes.

Holistic information evaluation of divergence of soil's properties by using of legacy data of large scale monitoring surveys

NASA Astrophysics Data System (ADS)

Mikheeva, Irina

2017-04-01

Identification of tendencies of soil's transformations is very important for adequate ecological and economical assessment of degradation of soils. But monitoring of conditions of soils, and other natural objects, bring up a number of important methodological questions, including the probabilistic and statistical analysis of the accumulated legacy data and their use for verification of quantitative estimates of natural processes. Owing to considerable natural variability there is a problem of a reliable assessment of contemporary soil evolution under the influence of environmental management and climate changes. When studying dynamics of soil quality it is necessary to consider soil as open complex system with parameters which significantly vary in space. The analysis of probabilistic distributions of attributes of studied system is informative for the characteristic of holistic state and behavior of the system. Therefore earlier we had offered the method of evaluation of alterations of soils by analysis of changes of pdf of their properties and their statistical entropy. The executed analysis of dynamics of pdf showed that often opposite tendencies to decrease and to increase of property can be shown at the same time. However to give an adequate quantitative evaluation of changes of soil properties it is necessary to characterize them in general. We proposed that it is reasonable to name processes of modern changes in soil properties concerning their start meaning by the term "divergence" and investigate it quantitatively. For this purpose we suggested to use value of information divergence which is defined as a measure of distinctions of pdf in compared objects or in various time. As the measure of dissimilarity, divergence should satisfy come conditions, the most important is scale-invariance property. Information divergence was used by us for evaluation of distinctions of soils according heterogeneity of factors of soil formation and with course of natural and anthropogenous processes. This characteristic allowed to allocate the most changed and vulnerable kinds and layers of soils, and also to range natural changes and anthropogenous impacts in size of their influence on properties of the soil. Case study was conducted on considerable part of the Priirtyshskaya plain in South of Western Siberia. Climate here is sharply continental and droughty. Soils were formed from ancient lake and alluvial deposits. It determined their mainly easy particle size distribution and spatial diversity of the texture. It is possible to judge rates and extent of manifestation of processes of degradation on alteration of properties of the main types of soils here: chestnut soils and Haplic Chernozems.

Modeling winter hydrological processes under differing climatic conditions: Modifying WEPP

NASA Astrophysics Data System (ADS)

Dun, Shuhui

Water erosion is a serious and continuous environmental problem worldwide. In cold regions, soil freeze and thaw has great impacts on infiltration and erosion. Rain or snowmelt on a thawing soil can cause severe water erosion. Of equal importance is snow accumulation and snowmelt, which can be the predominant hydrological process in areas of mid- to high latitudes and forested watersheds. Modelers must properly simulate winter processes to adequately represent the overall hydrological outcome and sediment and chemical transport in these areas. Modeling winter hydrology is presently lacking in water erosion models. Most of these models are based on the functional Universal Soil Loss Equation (USLE) or its revised forms, e.g., Revised USLE (RUSLE). In RUSLE a seasonally variable soil erodibility factor (K) was used to account for the effects of frozen and thawing soil. Yet the use of this factor requires observation data for calibration, and such a simplified approach cannot represent the complicated transient freeze-thaw processes and their impacts on surface runoff and erosion. The Water Erosion Prediction Project (WEPP) watershed model, a physically-based erosion prediction software developed by the USDA-ARS, has seen numerous applications within and outside the US. WEPP simulates winter processes, including snow accumulation, snowmelt, and soil freeze-thaw, using an approach based on mass and energy conservation. However, previous studies showed the inadequacy of the winter routines in the WEPP model. Therefore, the objectives of this study were: (1) To adapt a modeling approach for winter hydrology based on mass and energy conservation, and to implement this approach into a physically-oriented hydrological model, such as WEPP; and (2) To assess this modeling approach through case applications to different geographic conditions. A new winter routine was developed and its performance was evaluated by incorporating it into WEPP (v2008.9) and then applying WEPP to four study sites at different spatial scales under different climatic conditions, including experimental plots in Pullman, WA and Morris, MN, two agricultural drainages in Pendleton, OR, and a forest watershed in Mica Creek, ID. The model applications showed promising results, indicating adequacy of the mass- and energy-balance-based approach for winter hydrology simulation.

Biogeochemistry of Decomposition and Detrital Processing

NASA Astrophysics Data System (ADS)

Sanderman, J.; Amundson, R.

2003-12-01

Decomposition is a key ecological process that roughly balances net primary production in terrestrial ecosystems and is an essential process in resupplying nutrients to the plant community. Decomposition consists of three concurrent processes: communition or fragmentation, leaching of water-soluble compounds, and microbial catabolism. Decomposition can also be viewed as a sequential process, what Eijsackers and Zehnder (1990) compare to a Russian matriochka doll. Soil macrofauna fragment and partially solubilize plant residues, facilitating establishment of a community of decomposer microorganisms. This decomposer community will gradually shift as the most easily degraded plant compounds are utilized and the more recalcitrant materials begin to accumulate. Given enough time and the proper environmental conditions, most naturally occurring compounds can completely be mineralized to inorganic forms. Simultaneously with mineralization, the process of humification acts to transform a fraction of the plant residues into stable soil organic matter (SOM) or humus. For reference, Schlesinger (1990) estimated that only ˜0.7% of detritus eventually becomes stabilized into humus.Decomposition plays a key role in the cycling of most plant macro- and micronutrients and in the formation of humus. Figure 1 places the roles of detrital processing and mineralization within the context of the biogeochemical cycling of essential plant nutrients. Chapin (1991) found that while the atmosphere supplied 4% and mineral weathering supplied no nitrogen and <1% of phosphorus, internal nutrient recycling is the source for >95% of all the nitrogen and phosphorus uptake by tundra species in Barrow, Alaska. In a cool temperate forest, nutrient recycling accounted for 93%, 89%, 88%, and 65% of total sources for nitrogen, phosphorus, potassium, and calcium, respectively ( Chapin, 1991). (13K)Figure 1. A decomposition-centric biogeochemical model of nutrient cycling. Although there is significant external input (1) and output (2) from neighboring ecosystems (such as erosion), weathering of primary minerals (3), loss of secondary minerals (4), atmospheric deposition and N-fixation (5) and volatilization (6), the majority of plant-available nutrients are supplied by internal recycling through decomposition. Nutrients that are taken up by plants (7) are either consumed by fauna (8) and returned to the soil through defecation and mortality (10) or returned to the soil through litterfall and mortality (9). Detritus and humus can be immobilized into microbial biomass (11 and 13). Humus is formed by the transformation and stabilization of detrital (12) and microbial (14) compounds. During these transformations, SOM is being continually mineralized by the microorganisms (15) replenishing the inorganic nutrient pool (after Swift et al., 1979). The second major ecosystem role of decomposition is in the formation and stabilization of humus. The cycling and stabilization of SOM in the litter-soil system is presented in a conceptual model in Figure 2. Parallel with litterfall and most root turnover, detrital processing is concentrated at or near the soil surface. As labile SOM is preferentially degraded, there is a progressive shift from labile to passive SOM with increasing depth. There are three basic mechanisms for SOM accumulation in the mineral soil: bioturbation or physical mixing of the soil by burrowing animals (e.g., earthworms, gophers, etc.), in situ decomposition of roots and root exudates, and the leaching of soluble organic compounds. In the absence of bioturbation, distinct litter layers often accumulate above the mineral soil. In grasslands where the majority of net primary productivity (NPP) is allocated belowground, root inputs will dominate. In sandy soils with ample rainfall, leaching may be the major process incorporating carbon into the soil. (11K)Figure 2. Conceptual model of carbon cycling in the litter-soil system. In each horizon or depth increment, SOM is represented by three pools: labile SOM, slow SOM, and passive SOM. Inputs include aboveground litterfall and belowground root turnover and exudates, which will be distributed among the pools based on the biochemical nature of the material. Outputs from each pool include mineralization to CO2 (dashed lines), humification (labile→slow→passive), and downward transport due to leaching and physical mixing. Communition by soil fauna will accelerate the decomposition process and reveal previously inaccessible materials. Soil mixing and other disturbances can also make physically protected passive SOM available to microbial attack (passive→slow). There exists an amazing body of literature on the subject of decomposition that draws from many disciplines - including ecology, soil science, microbiology, plant physiology, biochemistry, and zoology. In this chapter, we have attempted to draw information from all of these fields to present an integrated analysis of decomposition in a biogeochemical context. We begin by reviewing the composition of detrital resources and SOM (Section 8.07.2), the organisms responsible for decomposition ( Section 8.07.3), and some methods for quantifying decomposition rates ( Section 8.07.4). This is followed by a discussion of the mechanisms behind decomposition ( Section 8.07.5), humification ( Section 8.07.6), and the controls on these processes ( Section 8.07.7). We conclude the chapter with a brief discussion on how current biogeochemical models incorporate this information ( Section 8.07.8).

Soils as records of past and present environments

NASA Astrophysics Data System (ADS)

Sauer, Daniela

2015-04-01

This contribution reflects selected pedological concepts that are helpful for interpreting soil properties related to past and present environments. These concepts are illustrated by examples from various landscapes, and their combination finally leads to some further conclusions. The concept of Targulian and Gerasimova (2009) distinguishes soil system and soil body. Soil system is defined as "open multiphase system functioning in any solid-phase substrate at its interface with the atmosphere, hydrosphere and biota", and soil body as "solid-phase part of a soil system produced by its long-term functioning and composed of a vertical sequence of genetic horizons". Soil system functioning corresponds to the recent environmental factors and includes heat and moisture dynamics, biomass production, biogeochemical cycles, and other processes. In contrast, a soil body is a record of the long-term functioning of a soil system. It thus provides a record not only of the functioning of the soil system under the present environmental conditions but also under past, possibly different, conditions. Hence, Targulian and Goryachkin (2004) called it the "memory" of the landscape. Richter and Yaalon (2012) argued that most soils comprise both, features that developed under the present environmental conditions and features that reflect different conditions that the soils experienced in the past; they concluded that most soils are polygenetic. Although the current functioning of the soil system in the concept of Targulian and Gerasimova (2009) is mainly controlled by the present-day combination of environmental factors, it should be added that past processes also influence the soil system, because past processes changed the soil properties in a way that also the present-day functioning of the soil system is affected by these changes. Earlier, Yaalon (1971) had categorised soil properties according to the time-span required for their adjustment to the actual environment, distinguishing (i) rapidly adjusting soil properties (adjusting within some hundreds of years), (ii) slowly adjusting soil properties (adjusting within some thousands of years), and (iii) persistent soil properties (showing no changes over ten thousands to millions of years). In a polygenetic soil, rapidly adjusting soil properties may already be in equilibrium with the present conditions, whereas slowly adjusting soil properties may still reflect past conditions. Thus, the lower the rate at which a certain soil property in a polygenetic soil adjusts, the larger is the extent to which this property is still determined by earlier environmental conditions. Knowledge on the rates at which soil properties adjust may hence be used to estimate the time at which a significant environmental change took place, based on the degree of overprinting of the different kinds of soil properties adjusting at different rates in a polygenetic soil. References: Richter, D. de B., Yaalon, D.H., 2012. "The changing model of soil" revisited. Soil Sci. Soc. Am. J. 76, 766-778. Targulian, V. O., Goryachkin, S. V., 2004. Soil memory: Types of records, carriers, hierarchy and diversity. Revista Mexicana Ciencias Geol. 21, 1-8. Targulian, V.O., Gerasimova, M., 2009. Soil geography: geography of soil systems and soil bodies. Soil Geography: New Horizons. International Conference, 16-20 November 2009 in Huatulco, Mexico. Book of abstracts, 39. Yaalon, D.H., 1971. Soil forming processes in time and space. In: Yaalon, D.H. (Ed.), Paleopedology-origin, nature and dating of paleosols. Int. Soc. Soil Sci. and Israel Univ. Press, Jerusalem, pp. 29-39.

Soil communities and plant litter decomposition as influenced by forest debris: Variation across tropical riparian and upland sites.

Treesearch

Honghua Ruana; Yiqing Lib; Xiaoming Zouc

2005-01-01

Forest debris on ground surface can interact with soil biota and consequently change ecosystem processes across heterogeneous landscape. We examined the interactions between forest debris and litter decomposition in riparian and upland sites within a tropical wet forest. Our experiment included control and debris-removal treatments. Debris-removal reduced leaf litter...

Enhancing Readiness Through Environmental Quality Technology

DTIC Science & Technology

1996-05-01

mercury . Up coming technologies for heavy metal soil contamination include phytoremediation and electrokinetics. Plants have also been shown to uptake... phytoremediation could be that process. Many plants have been found that have a nitroreductase enzyme. These plants can degrade explosive contaminants. This... phytoremediation in a wetland environment for explosive contaminated groundwater. But, this could be transferred directly to soils if proven successful

Spatiotemporal Variability of Hillslope Soil Moisture Across Steep, Highly Dissected Topography

NASA Astrophysics Data System (ADS)

Jarecke, K. M.; Wondzell, S. M.; Bladon, K. D.

2016-12-01

Hillslope ecohydrological processes, including subsurface water flow and plant water uptake, are strongly influenced by soil moisture. However, the factors controlling spatial and temporal variability of soil moisture in steep, mountainous terrain are poorly understood. We asked: How do topography and soils interact to control the spatial and temporal variability of soil moisture in steep, Douglas-fir dominated hillslopes in the western Cascades? We will present a preliminary analysis of bimonthly soil moisture variability from July-November 2016 at 0-30 and 0-60 cm depth across spatially extensive convergent and divergent topographic positions in Watershed 1 of the H.J. Andrews Experimental Forest in central Oregon. Soil moisture monitoring locations were selected following a 5 m LIDAR analysis of topographic position, aspect, and slope. Topographic position index (TPI) was calculated as the difference in elevation to the mean elevation within a 30 m radius. Convergent (negative TPI values) and divergent (positive TPI values) monitoring locations were established along northwest to northeast-facing aspects and within 25-55 degree slopes. We hypothesized that topographic position (convergent vs. divergent), as well as soil physical properties (e.g., texture, bulk density), control variation in hillslope soil moisture at the sub-watershed scale. In addition, we expected the relative importance of hillslope topography to the spatial variability in soil moisture to differ seasonally. By comparing the spatiotemporal variability of hillslope soil moisture across topographic positions, our research provides a foundation for additional understanding of subsurface flow processes and plant-available soil-water in forests with steep, highly dissected terrain.

Sub-soil microbial activity under rotational cotton crops in Australia

NASA Astrophysics Data System (ADS)

Polain, Katherine; Knox, Oliver; Wilson, Brian; Pereg, Lily

2016-04-01

Soil microbial communities contribute significantly to soil organic matter formation, stabilisation and destabilisation, through nutrient cycling and biodegradation. The majority of soil microbial research examines the processes occurring in the top 0 cm to 30 cm of the soil, where organic nutrients are easily accessible. In soils such as Vertosols, the high clay content causes swelling and cracking. When soil cracking is coupled with rain or an irrigation event, a flush of organic nutrients can move down the soil profile, becoming available for subsoil microbial community use and potentially making a significant contribution to nutrient cycling and biodegradation in soils. At present, the mechanisms and rates of soil nutrient turnover (such as carbon and nitrogen) at depth under cotton rotations are mostly speculative and the process-response relationships remain unclear, although they are undoubtedly underpinned by microbial activity. Our research aims to determine the contribution and role of soil microbiota to the accumulation, cycling and mineralisation of carbon and nitrogen through the whole root profile under continuous cotton (Gossypium hirsutum) and cotton-maize rotations in regional New South Wales, Australia. Through seasonal work, we have established both baseline and potential microbial activity rates from 0 cm to 100 cm down the Vertosol profile, using respiration and colourimetric methods. Further whole soil profile analyses will include determination of microbial biomass and isotopic carbon signatures using phospholipid fatty acid (PLFA) methodology, identification of microbial communities (sequencing) and novel experiments to investigate potential rates of nitrogen mineralisation and quantification of associated genes. Our preliminary observations and the hypotheses tested in this three-year study will be presented.

An application to model traffic intensity of agricultural machinery at field scale

NASA Astrophysics Data System (ADS)

Augustin, Katja; Kuhwald, Michael; Duttmann, Rainer

2017-04-01

Several soil-pressure-models deal with the impact of agricultural machines on soils. In many cases, these models were used for single spots and consider a static machine configuration. Therefore, a statement about the spatial distribution of soil compaction risk for entire working processes is limited. The aim of the study is the development of an application for the spatial modelling of traffic lanes from agricultural vehicles including wheel load, ground pressure and wheel passages at the field scale. The application is based on Open Source software, application and data formats, using python programming language. Minimum input parameters are GPS-positions, vehicles and tires (producer and model) and the tire inflation pressure. Five working processes were distinguished: soil tillage, manuring, plant protection, sowing and harvest. Currently, two different models (Diserens 2009, Rücknagel et al. 2015) were implemented to calculate the soil pressure. The application was tested at a study site in Lower Saxony, Germany. Since 2015, field traffic were recorded by RTK-GPS and used machine set ups were noted. Using these input information the traffic lanes, wheel load and soil pressure were calculated for all working processes. For instance, the maize harvest in 2016 with a crop chopper and one transport vehicle crossed about 55 % of the total field area. At some places the machines rolled over up to 46 times. Approximately 35 % of the total area was affected by wheel loads over 7 tons and soil pressures between 163 and 193 kPa. With the information about the spatial distribution of wheel passages, wheel load and soil pressure it is possible to identify hot spots of intensive field traffic. Additionally, the use of the application enables the analysis of soil compaction risk induced by agricultural machines for long- and short-term periods.

Molecular C dynamics downstream: the biochemical decomposition sequence and its impact on soil organic matter structure and function.

PubMed

Grandy, A Stuart; Neff, Jason C

2008-10-15

Advances in spectroscopic and other chemical methods have greatly enhanced our ability to characterize soil organic matter chemistry. As a result, the molecular characteristics of soil C are now known for a range of ecosystems, soil types, and management intensities. Placing this knowledge into a broader ecological and management context is difficult, however, and remains one of the fundamental challenges of soil organic matter research. Here we present a conceptual model of molecular soil C dynamics to stimulate inter-disciplinary research into the ecological implications of molecular C turnover and its management- and process-level controls. Our model describes three properties of soil C dynamics: 1) soil size fractions have unique molecular patterns that reflect varying degrees of biological and physical control over decomposition; 2) there is a common decomposition sequence independent of plant inputs or other ecosystem properties; and 3) molecular decomposition sequences, although consistent, are not uniform and can be altered by processes that accelerate or slow the microbial transformation of specific molecules. The consequences of this model include several key points. First, lignin presents a constraint to decomposition of plant litter and particulate C (>53 microm) but exerts little influence on more stable mineral-associated soil fractions <53 microm. Second, carbon stabilized onto mineral fractions has a distinct composition related more to microbially processed organic matter than to plant-related compounds. Third, disturbances, such as N fertilization and tillage, which alter decomposition rates, can have "downstream effects"; that is, a disturbance that directly alters the molecular dynamics of particulate C may have a series of indirect effects on C stabilization in silt and clay fractions.

Soil Functional Zone Management: A Vehicle for Enhancing Production and Soil Ecosystem Services in Row-Crop Agroecosystems.

PubMed

Williams, Alwyn; Kane, Daniel A; Ewing, Patrick M; Atwood, Lesley W; Jilling, Andrea; Li, Meng; Lou, Yi; Davis, Adam S; Grandy, A Stuart; Huerd, Sheri C; Hunter, Mitchell C; Koide, Roger T; Mortensen, David A; Smith, Richard G; Snapp, Sieglinde S; Spokas, Kurt A; Yannarell, Anthony C; Jordan, Nicholas R

2016-01-01

There is increasing global demand for food, bioenergy feedstocks and a wide variety of bio-based products. In response, agriculture has advanced production, but is increasingly depleting soil regulating and supporting ecosystem services. New production systems have emerged, such as no-tillage, that can enhance soil services but may limit yields. Moving forward, agricultural systems must reduce trade-offs between production and soil services. Soil functional zone management (SFZM) is a novel strategy for developing sustainable production systems that attempts to integrate the benefits of conventional, intensive agriculture, and no-tillage. SFZM creates distinct functional zones within crop row and inter-row spaces. By incorporating decimeter-scale spatial and temporal heterogeneity, SFZM attempts to foster greater soil biodiversity and integrate complementary soil processes at the sub-field level. Such integration maximizes soil services by creating zones of 'active turnover', optimized for crop growth and yield (provisioning services); and adjacent zones of 'soil building', that promote soil structure development, carbon storage, and moisture regulation (regulating and supporting services). These zones allow SFZM to secure existing agricultural productivity while avoiding or minimizing trade-offs with soil ecosystem services. Moreover, the specific properties of SFZM may enable sustainable increases in provisioning services via temporal intensification (expanding the portion of the year during which harvestable crops are grown). We present a conceptual model of 'virtuous cycles', illustrating how increases in crop yields within SFZM systems could create self-reinforcing feedback processes with desirable effects, including mitigation of trade-offs between yield maximization and soil ecosystem services. Through the creation of functionally distinct but interacting zones, SFZM may provide a vehicle for optimizing the delivery of multiple goods and services in agricultural systems, allowing sustainable temporal intensification while protecting and enhancing soil functioning.

Soil Functional Zone Management: A Vehicle for Enhancing Production and Soil Ecosystem Services in Row-Crop Agroecosystems

PubMed Central

Williams, Alwyn; Kane, Daniel A.; Ewing, Patrick M.; Atwood, Lesley W.; Jilling, Andrea; Li, Meng; Lou, Yi; Davis, Adam S.; Grandy, A. Stuart; Huerd, Sheri C.; Hunter, Mitchell C.; Koide, Roger T.; Mortensen, David A.; Smith, Richard G.; Snapp, Sieglinde S.; Spokas, Kurt A.; Yannarell, Anthony C.; Jordan, Nicholas R.

2016-01-01

There is increasing global demand for food, bioenergy feedstocks and a wide variety of bio-based products. In response, agriculture has advanced production, but is increasingly depleting soil regulating and supporting ecosystem services. New production systems have emerged, such as no-tillage, that can enhance soil services but may limit yields. Moving forward, agricultural systems must reduce trade-offs between production and soil services. Soil functional zone management (SFZM) is a novel strategy for developing sustainable production systems that attempts to integrate the benefits of conventional, intensive agriculture, and no-tillage. SFZM creates distinct functional zones within crop row and inter-row spaces. By incorporating decimeter-scale spatial and temporal heterogeneity, SFZM attempts to foster greater soil biodiversity and integrate complementary soil processes at the sub-field level. Such integration maximizes soil services by creating zones of ‘active turnover’, optimized for crop growth and yield (provisioning services); and adjacent zones of ‘soil building’, that promote soil structure development, carbon storage, and moisture regulation (regulating and supporting services). These zones allow SFZM to secure existing agricultural productivity while avoiding or minimizing trade-offs with soil ecosystem services. Moreover, the specific properties of SFZM may enable sustainable increases in provisioning services via temporal intensification (expanding the portion of the year during which harvestable crops are grown). We present a conceptual model of ‘virtuous cycles’, illustrating how increases in crop yields within SFZM systems could create self-reinforcing feedback processes with desirable effects, including mitigation of trade-offs between yield maximization and soil ecosystem services. Through the creation of functionally distinct but interacting zones, SFZM may provide a vehicle for optimizing the delivery of multiple goods and services in agricultural systems, allowing sustainable temporal intensification while protecting and enhancing soil functioning. PMID:26904043

An experimental investigation to characterise soil macroporosity under different land use and land covers of northeast India

NASA Astrophysics Data System (ADS)

Shougrakpam, Sangeeta; Sarkar, Rupak; Dutta, Subashisa

2010-10-01

Saturated macropore flow is the dominant hydrological process in tropical and subtropical hilly watersheds of northeast India. The process of infiltration into saturated macroporous soils is primarily controlled by size, network, density, connectivity, saturation of surrounding soil matrix, and depthwise distribution of macropores. To understand the effects of local land use, land cover and management practices on soil macroporosity, colour dye infiltration experiments were conducted with ten soil columns (25 × 25 × 50 cm) collected from different watersheds of the region under similar soil and agro-climatic zones. The sampling sites included two undisturbed forested hillslopes, two conventionally cultivated paddy fields, two forest lands abandoned after Jhum cultivation, and two paddy fields, one pineapple plot and one banana plot presently under active cultivation stage of the Jhum cycle. Digital image analyses of the obtained dye patterns showed that the infiltration patterns differed significantly for different sites with varying land use, land cover, and cultivation practices. Undisturbed forest soils showed high degree of soil macroporosity throughout the soil profile, paddy fields revealed sealing of macropores at the topsoil due to hard pan formation, and Jhum cultivated plots showed disconnected subsoil macropores. The important parameters related to soil macropores such as maximum and average size of macropores, number of active macropores, and depthwise distribution of macropores were estimated to characterise the soil macroporosity for the sites. These experimentally derived quantitative data of soil macroporosity can have wide range of applications in the region such as water quality monitoring and groundwater pollution assessment due to preferential leaching of solutes and pesticides, study of soil structural properties and infiltration behaviour of soils, investigation of flash floods in rivers, and hydrological modelling of the watersheds.

The Changing Model of Soil

NASA Astrophysics Data System (ADS)

Richter, D. D.; Yaalon, D.

2012-12-01

The contemporary genetic model of soil is changing rapidly in response to advances in soil science and to human and environmental forcings in the 21st century (Richter and Yaalon, 2012). Three ongoing changes in the model of soil include that: (1) lower soil boundaries are much deeper than the solum, historically the O to B horizons, (2) most soils are polygenetic paleosols, products of soil-forming processes that have ranged widely over soils' lifetimes, and (3) soils are globally human-natural bodies, no longer natural bodies. Together, these changes in the model of soil mean that human forcings are a global wave of soil polygenesis altering fluxes of matter and energy and transforming soil thermodynamics as potentially very deep systems. Because soils are non-linear systems resulting from high-order interactions of physics, chemistry, and biology, trajectories of how human forcings alter soils over decades are not readily predictable and require long-term soil observations. There is much to learn about how soils are changing internally as central components of management systems and externally in relation to wider environments. To be critical, research has been remarkably superficial in studies of soil, reductionist in approach, and lacking in time-series observations of responses to soil management. While this criticism may sound negative, it creates significant opportunities for contemporary soil scientists.

Processing of Lunar Soil Simulant for Space Exploration Applications

NASA Technical Reports Server (NTRS)

Sen, Subhayu; Ray, Chandra S.; Reddy, Ramana

2005-01-01

NASA's long-term vision for space exploration includes developing human habitats and conducting scientific investigations on planetary bodies, especially on Moon and Mars. To reduce the level of up-mass processing and utilization of planetary in-situ resources is recognized as an important element of this vision. Within this scope and context, we have undertaken a general effort aimed primarily at extracting and refining metals, developing glass, glass-ceramic, or traditional ceramic type materials using lunar soil simulants. In this paper we will present preliminary results on our effort on carbothermal reduction of oxides for elemental extraction and zone refining for obtaining high purity metals. In additions we will demonstrate the possibility of developing glasses from lunar soil simulant for fixing nuclear waste from potential nuclear power generators on planetary bodies. Compositional analysis, x-ray diffraction patterns and differential thermal analysis of processed samples will be presented.

Estimation of the water retention curve from the soil hydraulic conductivity and sorptivity in an upward infiltration process

NASA Astrophysics Data System (ADS)

Moret-Fernández, David; Angulo, Marta; Latorre, Borja; González-Cebollada, César; López, María Victoria

2017-04-01

Determination of the saturated hydraulic conductivity, Ks, and the α and n parameters of the van Genuchten (1980) water retention curve, θ(h), are fundamental to fully understand and predict soil water distribution. This work presents a new procedure to estimate the soil hydraulic properties from the inverse analysis of a single cumulative upward infiltration curve followed by an overpressure step at the end of the wetting process. Firstly, Ks is calculated by the Darcy's law from the overpressure step. The soil sorptivity (S) is then estimated using the Haverkamp et al., (1994) equation. Next, a relationship between α and n, f(α,n), is calculated from the estimated Sand Ks. The α and n values are finally obtained by the inverse analysis of the experimental data after applying the f(α,n) relationship to the HYDRUS-1D model. The method was validated on theoretical synthetic curves for three different soils (sand, loam and clay), and subsequently tested on experimental sieved soils (sand, loam, clay loam and clay) of known hydraulic properties. A robust relationship was observed between the theoretical α and nvalues (R2 > 0.99) of the different synthetic soils and those estimated from inverse analysis of the upward infiltration curve. Consistent results were also obtained for the experimental soils (R2 > 0.85). These results demonstrated that this technique allowed accurate estimates of the soil hydraulic properties for a wide range of textures, including clay soils.

MARINE AEROSOLS ALTER SOIL PROCESSES IN COASTAL FORESTS

EPA Science Inventory

Most models of watershed biogeochemistry include the movement of materials from land to rivers and eventually the ocean. Few conceptual views, however, acknowledge the influence of materials derived from the ocean on terrestrial ecosystems processes. Based on spatial patterns o...

A fully integrated SWAT-MODFLOW hydrologic model

USDA-ARS?s Scientific Manuscript database

The Soil and Water Assessment Tool (SWAT) and MODFLOW models are being used worldwide for managing surface and groundwater water resources. The SWAT models hydrological processes occurring at the surface including shallow aquifers, while MODFLOW simulate groundwater processes. However, neither SWAT ...

Erosion of soil organic carbon: implications for carbon sequestration

USGS Publications Warehouse

Van Oost, Kristof; Van Hemelryck, Hendrik; Harden, Jennifer W.; McPherson, B.J.; Sundquist, E.T.

2009-01-01

Agricultural activities have substantially increased rates of soil erosion and deposition, and these processes have a significant impact on carbon (C) mineralization and burial. Here, we present a synthesis of erosion effects on carbon dynamics and discuss the implications of soil erosion for carbon sequestration strategies. We demonstrate that for a range of data-based parameters from the literature, soil erosion results in increased C storage onto land, an effect that is heterogeneous on the landscape and is variable on various timescales. We argue that the magnitude of the erosion term and soil carbon residence time, both strongly influenced by soil management, largely control the strength of the erosion-induced sink. In order to evaluate fully the effects of soil management strategies that promote carbon sequestration, a full carbon account must be made that considers the impact of erosion-enhanced disequilibrium between carbon inputs and decomposition, including effects on net primary productivity and decomposition rates.

Granular Mechanics and Surface Systems Lab

NASA Technical Reports Server (NTRS)

Randle, Leah

2007-01-01

The cratering of sand under gas jets is observed to further understanding of soil in hopes to further understand lunar soil. Lunar soil is important to understand because it is causing problems with the materials taken into space including the shuttle. Lunar soil is not rounded like beach sand. Lunar soil is sharp like little particles of glass, and some times when blown they can hook on to one another and become bigger particles. The experiments are designed to help to understand some of the basic physics in how the shuttle jets will interact with lunar soil and how to control the lunar soil. These experiments investigate the diameter of the gas jet and the size of the sand grains to determine how these parameters affect the erosion rate and the cratering processes. Therefore, the experiments preformed will point out what is dependent and what is independent.

Site and soil characterization of hazardous waste sites using an expert system guide

NASA Astrophysics Data System (ADS)

Cameron, Roy E.

1993-03-01

An expert system guide (knowledge book) has been devised to assist field personnel who must identify, describe, sample, and interpret size and soil characteristics of hazardous waste sites. The guide takes an approach that will be unfamiliar to most soil and environmental scientists and is directed to on-scene coordinators and project managers and others who may have little soil science training. It meets the need of the U.S. Environmental Protection Agency for standard procedures, guidelines, or protocols that address soil and site contamination, particularly heavy metals. The guide is organized to include: (1) general considerations and processes for collecting and using site and soils data, (2) detailed knowledge frames (descriptive profiles) of likely site and soil conditions, (3) a citation of references, (4) an appendix listing common sources of characterization data, and (5) a glossary of more than 900 general definitions.

Terrestrial ecosystem process model Biome-BGCMuSo v4.0: summary of improvements and new modeling possibilities

NASA Astrophysics Data System (ADS)

Hidy, Dóra; Barcza, Zoltán; Marjanović, Hrvoje; Zorana Ostrogović Sever, Maša; Dobor, Laura; Gelybó, Györgyi; Fodor, Nándor; Pintér, Krisztina; Churkina, Galina; Running, Steven; Thornton, Peter; Bellocchi, Gianni; Haszpra, László; Horváth, Ferenc; Suyker, Andrew; Nagy, Zoltán

2016-12-01

The process-based biogeochemical model Biome-BGC was enhanced to improve its ability to simulate carbon, nitrogen, and water cycles of various terrestrial ecosystems under contrasting management activities. Biome-BGC version 4.1.1 was used as a base model. Improvements included addition of new modules such as the multilayer soil module, implementation of processes related to soil moisture and nitrogen balance, soil-moisture-related plant senescence, and phenological development. Vegetation management modules with annually varying options were also implemented to simulate management practices of grasslands (mowing, grazing), croplands (ploughing, fertilizer application, planting, harvesting), and forests (thinning). New carbon and nitrogen pools have been defined to simulate yield and soft stem development of herbaceous ecosystems. The model version containing all developments is referred to as Biome-BGCMuSo (Biome-BGC with multilayer soil module; in this paper, Biome-BGCMuSo v4.0 is documented). Case studies on a managed forest, cropland, and grassland are presented to demonstrate the effect of model developments on the simulation of plant growth as well as on carbon and water balance.

Development of synthetic media mimicking food soils to study the behaviour of Listeria monocytogenes on stainless steel surfaces.

PubMed

Overney, Anaïs; Chassaing, Danielle; Carpentier, Brigitte; Guillier, Laurent; Firmesse, Olivier

2016-12-05

Listeria monocytogenes is one of the main targets of hygiene procedures in the ready-to-eat food industry due to its ability to persist for months or even years in processing plants, where it can contaminate food during processing. The factors associated with persistence are often those that foster growth, which itself depends on food contamination of surfaces. It is therefore essential to experiment by using food soils or media modelling these soils to understand the behaviour of L. monocytogenes on surfaces of food processing plants. Thus, we set up an experimental plan including three physiological parameters characteristic of the behaviour of cells on surfaces, namely spatial distribution, adhesion forces and the physiological state of sessile L. monocytogenes. These were recorded in two food soils: smoked salmon juice and meat exudate. According to our results, the behaviour of L. monocytogenes on stainless steel surfaces is highly dependent on the food soil used. The presence of viable but non-culturable (VBNC) cells was demonstrated using meat exudate, while all viable cells were recovered using smoked salmon juice. Moreover, on the basis of our criteria and after validation with three strains of L. monocytogenes, we showed that smoked salmon juice can be substituted by a modified culture medium, demonstrating that drawbacks associated with the use of food soils can be overcome. Copyright © 2016 Elsevier B.V. All rights reserved.

Chemical Sensing for Buried Landmines - Fundamental Processes Influencing Trace Chemical Detection

DOE Office of Scientific and Technical Information (OSTI.GOV)

PHELAN, JAMES M.

2002-05-01

Mine detection dogs have a demonstrated capability to locate hidden objects by trace chemical detection. Because of this capability, demining activities frequently employ mine detection dogs to locate individual buried landmines or for area reduction. The conditions appropriate for use of mine detection dogs are only beginning to emerge through diligent research that combines dog selection/training, the environmental conditions that impact landmine signature chemical vapors, and vapor sensing performance capability and reliability. This report seeks to address the fundamental soil-chemical interactions, driven by local weather history, that influence the availability of chemical for trace chemical detection. The processes evaluated include:more » landmine chemical emissions to the soil, chemical distribution in soils, chemical degradation in soils, and weather and chemical transport in soils. Simulation modeling is presented as a method to evaluate the complex interdependencies among these various processes and to establish conditions appropriate for trace chemical detection. Results from chemical analyses on soil samples obtained adjacent to landmines are presented and demonstrate the ultra-trace nature of these residues. Lastly, initial measurements of the vapor sensing performance of mine detection dogs demonstrates the extreme sensitivity of dogs in sensing landmine signature chemicals; however, reliability at these ultra-trace vapor concentrations still needs to be determined. Through this compilation, additional work is suggested that will fill in data gaps to improve the utility of trace chemical detection.« less

Denitrification in Agricultural Soils: Integrated control and Modelling at various scales (DASIM)

NASA Astrophysics Data System (ADS)

Müller, Christoph; Well, Reinhard; Böttcher, Jürgen; Butterbach-Bahl, Klaus; Dannenmann, Michael; Deppe, Marianna; Dittert, Klaus; Dörsch, Peter; Horn, Marcus; Ippisch, Olaf; Mikutta, Robert; Senbayram, Mehmet; Vogel, Hans-Jörg; Wrage-Mönnig, Nicole; Müller, Carsten

2016-04-01

The new research unit DASIM brings together the expertise of 11 working groups to study the process of denitrification at unprecedented spatial and temporal resolution. Based on state-of-the art analytical techniques our aim is to develop improved denitrification models ranging from the microscale to the field/plot scale. Denitrification, the process of nitrate reduction allowing microbes to sustain respiration under anaerobic conditions, is the key process returning reactive nitrogen as N2to the atmosphere. Actively denitrifying communities in soil show distinct regulatory phenotypes (DRP) with characteristic controls on the single reaction steps and end-products. It is unresolved whether DRPs are anchored in the taxonomic composition of denitrifier communities and how environmental conditions shape them. Despite being intensively studied for more than 100 years, denitrification rates and emissions of its gaseous products can still not be satisfactorily predicted. While the impact of single environmental parameters is well understood, the complexity of the process itself with its intricate cellular regulation in response to highly variable factors in the soil matrix prevents robust prediction of gaseous emissions. Key parameters in soil are pO2, organic matter content and quality, pH and the microbial community structure, which in turn are affected by the soil structure, chemistry and soil-plant interactions. In the DASIM research unit, we aim at the quantitative prediction of denitrification rates as a function of microscale soil structure, organic matter quality, DRPs and atmospheric boundary conditions via a combination of state-of-the-art experimental and analytical tools (X-ray μCT, 15N tracing, NanoSIMS, microsensors, advanced flux detection, NMR spectroscopy, and molecular methods including next generation sequencing of functional gene transcripts). We actively seek collaboration with researchers working in the field of denitrification.

A Unified Multi-scale Model for Cross-Scale Evaluation and Integration of Hydrological and Biogeochemical Processes

NASA Astrophysics Data System (ADS)

Liu, C.; Yang, X.; Bailey, V. L.; Bond-Lamberty, B. P.; Hinkle, C.

2013-12-01

Mathematical representations of hydrological and biogeochemical processes in soil, plant, aquatic, and atmospheric systems vary with scale. Process-rich models are typically used to describe hydrological and biogeochemical processes at the pore and small scales, while empirical, correlation approaches are often used at the watershed and regional scales. A major challenge for multi-scale modeling is that water flow, biogeochemical processes, and reactive transport are described using different physical laws and/or expressions at the different scales. For example, the flow is governed by the Navier-Stokes equations at the pore-scale in soils, by the Darcy law in soil columns and aquifer, and by the Navier-Stokes equations again in open water bodies (ponds, lake, river) and atmosphere surface layer. This research explores whether the physical laws at the different scales and in different physical domains can be unified to form a unified multi-scale model (UMSM) to systematically investigate the cross-scale, cross-domain behavior of fundamental processes at different scales. This presentation will discuss our research on the concept, mathematical equations, and numerical execution of the UMSM. Three-dimensional, multi-scale hydrological processes at the Disney Wilderness Preservation (DWP) site, Florida will be used as an example for demonstrating the application of the UMSM. In this research, the UMSM was used to simulate hydrological processes in rooting zones at the pore and small scales including water migration in soils under saturated and unsaturated conditions, root-induced hydrological redistribution, and role of rooting zone biogeochemical properties (e.g., root exudates and microbial mucilage) on water storage and wetting/draining. The small scale simulation results were used to estimate effective water retention properties in soil columns that were superimposed on the bulk soil water retention properties at the DWP site. The UMSM parameterized from smaller scale simulations were then used to simulate coupled flow and moisture migration in soils in saturated and unsaturated zones, surface and groundwater exchange, and surface water flow in streams and lakes at the DWP site under dynamic precipitation conditions. Laboratory measurements of soil hydrological and biogeochemical properties are used to parameterize the UMSM at the small scales, and field measurements are used to evaluate the UMSM.

The impact of non-isothermal soil moisture transport on evaporation fluxes in a maize cropland

NASA Astrophysics Data System (ADS)

Shao, Wei; Coenders-Gerrits, Miriam; Judge, Jasmeet; Zeng, Yijian; Su, Ye

2018-06-01

The process of evaporation interacts with the soil, which has various comprehensive mechanisms. Multiphase flow models solve air, vapour, water, and heat transport equations to simulate non-isothermal soil moisture transport of both liquid water and vapor flow, but are only applied in non-vegetated soils. For (sparsely) vegetated soils often energy balance models are used, however these lack the detailed information on non-isothermal soil moisture transport. In this study we coupled a multiphase flow model with a two-layer energy balance model to study the impact of non-isothermal soil moisture transport on evaporation fluxes (i.e., interception, transpiration, and soil evaporation) for vegetated soils. The proposed model was implemented at an experimental agricultural site in Florida, US, covering an entire maize-growing season (67 days). As the crops grew, transpiration and interception became gradually dominated, while the fraction of soil evaporation dropped from 100% to less than 20%. The mechanisms of soil evaporation vary depending on the soil moisture content. After precipitation the soil moisture content increased, exfiltration of the liquid water flow could transport sufficient water to sustain evaporation from soil, and the soil vapor transport was not significant. However, after a sufficient dry-down period, the soil moisture content significantly reduced, and the soil vapour flow significantly contributed to the upward moisture transport in topmost soil. A sensitivity analysis found that the simulations of moisture content and temperature at the soil surface varied substantially when including the advective (i.e., advection and mechanical dispersion) vapour transport in simulation, including the mechanism of advective vapour transport decreased soil evaporation rate under wet condition, while vice versa under dry condition. The results showed that the formulation of advective soil vapor transport in a soil-vegetation-atmosphere transfer continuum can affect the simulated evaporation fluxes, especially under dry condition.

Influence of Disturbance on Soil Respiration in Biologically Crusted Soil during the Dry Season

PubMed Central

Feng, Wei; Zhang, Yu-qing; Wu, Bin; Zha, Tian-shan; Jia, Xin; Qin, Shu-gao; Shao, Chen-xi; Liu, Jia-bin; Lai, Zong-rui; Fa, Ke-yu

2013-01-01

Soil respiration (Rs) is a major pathway for carbon cycling and is a complex process involving abiotic and biotic factors. Biological soil crusts (BSCs) are a key biotic component of desert ecosystems worldwide. In desert ecosystems, soils are protected from surface disturbance by BSCs, but it is unknown whether Rs is affected by disturbance of this crust layer. We measured Rs in three types of disturbed and undisturbed crusted soils (algae, lichen, and moss), as well as bare land from April to August, 2010, in Mu Us desert, northwest China. Rs was similar among undisturbed soils but increased significantly in disturbed moss and algae crusted soils. The variation of Rs in undisturbed and disturbed soil was related to soil bulk density. Disturbance also led to changes in soil organic carbon and fine particles contents, including declines of 60–70% in surface soil C and N, relative to predisturbance values. Once BSCs were disturbed, Q 10 increased. Our findings indicate that a loss of BSCs cover will lead to greater soil C loss through respiration. Given these results, understanding the disturbance sensitivity impact on Rs could be helpful to modify soil management practices which promote carbon sequestration. PMID:24453845

SSMILES.

ERIC Educational Resources Information Center

Sunal, Dennis W.; Tracy, Dyanne M., Eds.

1991-01-01

A learning cycle activity which allows students to practice process skills by sieving different size fractions of sediments is described. Science topics include weathering, erosion, streams, sedimentation, sedimentary rocks, soils, beaches, dunes, or glacial deposits. Mathematics topics include number lines, ordinal numbers, greater than/less…

Carbon allocation and carbon isotope fluxes in the plant-soil-atmosphere continuum: a review

NASA Astrophysics Data System (ADS)

Brüggemann, N.; Gessler, A.; Kayler, Z.; Keel, S. G.; Badeck, F.; Barthel, M.; Boeckx, P.; Buchmann, N.; Brugnoli, E.; Esperschütz, J.; Gavrichkova, O.; Ghashghaie, J.; Gomez-Casanovas, N.; Keitel, C.; Knohl, A.; Kuptz, D.; Palacio, S.; Salmon, Y.; Uchida, Y.; Bahn, M.

2011-04-01

The terrestrial carbon (C) cycle has received increasing interest over the past few decades, however, there is still a lack of understanding of the fate of newly assimilated C allocated within plants and to the soil, stored within ecosystems and lost to the atmosphere. Stable carbon isotope studies can give novel insights into these issues. In this review we provide an overview of an emerging picture of plant-soil-atmosphere C fluxes, as based on C isotope studies, and identify processes determining related C isotope signatures. The first part of the review focuses on isotopic fractionation processes within plants during and after photosynthesis. The second major part elaborates on plant-internal and plant-rhizosphere C allocation patterns at different time scales (diel, seasonal, interannual), including the speed of C transfer and time lags in the coupling of assimilation and respiration, as well as the magnitude and controls of plant-soil C allocation and respiratory fluxes. Plant responses to changing environmental conditions, the functional relationship between the physiological and phenological status of plants and C transfer, and interactions between C, water and nutrient dynamics are discussed. The role of the C counterflow from the rhizosphere to the aboveground parts of the plants, e.g. via CO2 dissolved in the xylem water or as xylem-transported sugars, is highlighted. The third part is centered around belowground C turnover, focusing especially on above- and belowground litter inputs, soil organic matter formation and turnover, production and loss of dissolved organic C, soil respiration and CO2 fixation by soil microbes. Furthermore, plant controls on microbial communities and activity via exudates and litter production as well as microbial community effects on C mineralization are reviewed. The last part of the paper is dedicated to physical interactions between soil CO2 and the soil matrix, such as CO2 diffusion and dissolution processes within the soil profile. From the presented evidence we conclude that there exists a tight coupling of physical, chemical and biological processes involved in C cycling and C isotope fluxes in the plant-soil-atmosphere system. Generally, research using information from C isotopes allows an integrated view of the different processes involved. However, complex interactions among the range of processes complicate or impede the interpretation of isotopic signals in CO2 or organic compounds at the plant and ecosystem level. This is where new research approaches should be aimed at.

Assessment of carbon pools in two soils from the Campania region (Southwest, Italy) under different forest types

NASA Astrophysics Data System (ADS)

Álvarez-Romero, Marta; Papa, Stefania; Lozano-García, Beatriz; Parras-Alcántara, Luis; González-Pérez, José A.; Jordán, Antonio; Zavala, Lorena M.; González-Vila, Francisco J.; Coppola, Elio

2014-05-01

Soil is the largest carbon reservoir of terrestrial ecosystems, this reservoir is not inert, but it is constantly in a dynamic phase of accumulation an depletion. After the addition, in the soil, of organic residues of different origin and nature, two processes can occur in charge of SOM (Soil Organic Matter) during the pedogenesis: mineralization and humification. The accumulation of SOM in soil is controlled by the balance between carbon inputs and losses through mineralization and/or leaching. In particular the humification process leads to the formation of organic compounds (in some cases even complex organo-mineral) chemically stable able to distribute itself in the soil second rules of site-specific pedogenesis. The transport process along the profile can take very different forms which may extend in the formation of Bh horizons of accumulation in depth also strongly cemented (so-called ortstein). The transport process along the profile occurs for the occurrence of certain conditions such as deposition of high amounts of organic residues on the top of the profile, high porosity of the soil for the presence of coarse solid fractions (coarse sands or skeleton) that determinate a strong infiltrating capacity of the circulating waters, extreme temperatures can slow or stop the process of mineralization and/or humification in one intermediate step of the degradation process releasing organic metabolites with high or medium solubility and high loads of percolating water related to intense rainfall. The nature of the forest cover influence the quantity and quality of the organic materials deposited with marked differences between coniferous and deciduous especially in relation to resistance to degradation and production of intermediate metabolites. Two soils from Campania region located in Monte Santa Croce (Caserta, Italy) with andic properties, different forest cover (pine and chestnut) and that meets the requirements of the place and pedological formation suitable for the formation and accumulation of SOM in depth (Bh horizon) were studied. The content of the different soil C fractions was assessed for each soil profile and included: total extractable C, (TEC), total organic C (TOC), total extractable lipds (TEL), humified C (humic and fulvic acids, HA & FA) and non humic C (NHC), lignin C, cellulose C. Also were calculated parameters of humification, humification degree (DH), humification rate (HR), total level of humification (HU) and humification index (HI) The results are discussed in terms of how soil use and vegetation influences the identified C pools, and the humification indexes.

Isotopic Expression of Soil Denitrification across Gradients in Nitrogen and Carbon Availability

NASA Astrophysics Data System (ADS)

Walker, R.; Houlton, B. Z.; Perakis, S. S.

2016-12-01

Denitrification removes biologically available nitrogen (N) from ecosystems, making it an important control over the biosphere's N balance, with implications for air quality, human health and climate change. Despite its importance, estimates of the global soil denitrification flux remain highly uncertain. Major challenges lie in directly measuring the gaseous by-products of denitrification and scaling this complex microbial processes in both space and time. Process-based models constrained by empirical isotopic evidence have emerged as a method to help overcome these challenges. These models use the terrestrial 15N budget, along with soil moisture and N input data, to quantify denitrification fluxes and its gaseous forms, including NO, N2O and N2. However, the robustness of this method is limited by incomplete understanding of isotopic expression of denitrification and how it varies across known controls, such as carbon (C) and nitrate (NO3) availability. Here, we present a quantitative assessment of the isotope effect expression of in situ soil denitrification across gradients in N and C concentrations. This experiment tests the hypothesis that isotopic expression of soil denitrification (a kinetic process) increases with NO3 availability (reaction substrate) and decreases with increasing availability of organic C (electron donor). To test the impact of NO3 availability on the isotope effect of denitrification, field incubations experiments were conducted across a natural soil N gradient, ranging from 0.11 to 0.69% N. Similarly, the impact of electron donor availability was tested by conducting field incubations across a natural soil C gradient ranging from 1.94 to 11.60%. Data show that in lower N sites, the percent of NO3 consumed during the incubation was higher, while C availability neither affected the fraction of NO3 consumed nor the rate of consumption. These findings suggest that greater NO3 concentrations allow for greater isotope expression of denitrification in soil, supporting the working hypothesis. These results will be complemented by laboratory experiments in which NO3 concentration, C availability, and temperature are systematically varied. Future goals include the incorporation of these data into existing models to improve estimates of global N fluxes.

Runoff as a factor in USLE/RUSLE technology

NASA Astrophysics Data System (ADS)

Kinnell, Peter

2014-05-01

Modelling erosion for prediction purposes started with the development of the Universal Soil Loss Equation the focus of which was the prediction of long term (~20) average annul soil loss from field sized areas. That purpose has been maintained in the subsequent revision RUSLE, the most widely used erosion prediction model in the world. The lack of ability to predict short term soil loss saw the development of so-called process based models like WEPP and EUROSEM which focussed on predicting event erosion but failed to improve the prediction of long term erosion where the RUSLE worked well. One of the features of erosion recognised in the so-called process based modes is the fact that runoff is a primary factor in rainfall erosion and some modifications of USLE/RUSLE model have been proposed have included runoff as in independent factor in determining event erosivity. However, these models have ignored fundamental mathematical rules. The USLE-M which replaces the EI30 index by the product of the runoff ratio and EI30 was developed from the concept that soil loss is the product of runoff and sediment concentration and operates in a way that obeys the mathematical rules upon which the USLE/RUSLE model was based. In accounts for event soil loss better that the EI30 index where runoff values are known or predicted adequately. RUSLE2 now includes a capacity to model runoff driven erosion.

Land use and surface process domains on alpine hillslopes

NASA Astrophysics Data System (ADS)

Kuhn, Nikolaus J.; Caviezel, Chatrina; Hunziker, Matthias

2015-04-01

Shrubs and trees are generally considered to protect hillslopes from erosion. As a consequence, shrub encroachment on mountain pastures after abandoning grazing is not considered a threat to soils. However, the abandonment of mown or grazed grasslands causes a shift in vegetation composition and thus a change in landscape ecology and geomorphology. On many alpine slopes, current changes in land use and vegetation cover are accompanied by climate change, potentially generating a new geomorphic regime. Most of the debate focuses on the effect of land abandonment on water erosion rates. Generally, an established perennial vegetation cover improves the mechanical anchoring of the soil and the regulation of the soil water budget, including runoff generation and erosion. However, changing vegetation composition affects many other above- and below-ground properties like root density, -diversity and -geometry, soil structure, pore volume and acidity. Each combination of these properties can lead to a distinct scenario of dominating surface processes, often not reflected by common erosion risk assessment procedures. The study of soil properties along a chronosequence of green alder (alnusviridis) encroachment on the Unteralptal in central Switzerland reveals that shrub encroachment changes soil and vegetation properties towards an increase of resistance to run-off related erosion processes, but a decrease of slope stability against shallow landslides. The latter are a particular threat because of the currently increasing frequency of slide-triggering high magnitude rainfalls. The potential change of process domain on alpine pastures highlights the need for a careful use of erosion models when assessing future land use and climate scenarios. In mountains, but also other intensively managed agricultural landscapes, risk assessment without the appropriate reflection on the shifting relevance of surface processes carries the risk of missing future threats to environmental quality, services and hazards.

Modeling Microbial Processes in EPIC to Estimate Greenhouse Gas Emissions from soils

NASA Astrophysics Data System (ADS)

Schwab, D. E.; Izaurralde, R. C.; McGill, W. B.; Williams, J. R.; Schmid, E.

2009-12-01

Emissions of trace gases (CO2, N2O and CH4) to the atmosphere from managed terrestrial ecosystems have been contributing significantly to the warming of Earth. Trace gas production is dominated by biospheric processes. An improved knowledge of the soil-plant-atmosphere interface is of key importance for understanding trace gas dynamics. In soils, microbial metabolism plays a key role in the release or uptake of trace gases. Here we present work on the biophysical and biogeochemical model EPIC (Environmental Policy/Integrated Climate) to extend its capabilities to simulate CO2 and N2O fluxes in managed and unmanaged ecosystems. Emphasis will be given to recently developed, microbially-based, denitrification and nitrification modules. The soil-atmosphere exchange of trace gases can be measured by using various equipments, but often these measurements exhibit extreme space-time variability. We use hourly time steps to account for the variability induced by small changes in environmental conditions. Soils are often studied as macroscopic systems, although their functions are predominantly controlled at a microscopic level; i.e. the level of the microorganisms. We include these processes to the extent that these are known and can be quantitatively described. We represent soil dynamics mathematically with routines for gas diffusion, Michael Menten processes, electron budgeting and other processes such as uptake and transformations. We hypothesize that maximization of energy capture form scarce substrates using energetic favorable reactions drives evolution and that competitive advantage can result by depriving a competitor from a substrate. This Microbe Model changes concepts of production of N-containing trace gases; it unifies understanding of N oxidation and reduction, predicts production and evolution of trace gases and is consistent with observations of anaerobic ammonium oxidation.

A Brief History of the use of Electromagnetic Induction Techniques in Soil Survey

NASA Astrophysics Data System (ADS)

Brevik, Eric C.; Doolittle, James

2017-04-01

Electromagnetic induction (EMI) has been used to characterize the spatial variability of soil properties since the late 1970s. Initially used to assess soil salinity, the use of EMI in soil studies has expanded to include: mapping soil types; characterizing soil water content and flow patterns; assessing variations in soil texture, compaction, organic matter content, and pH; and determining the depth to subsurface horizons, stratigraphic layers or bedrock, among other uses. In all cases the soil property being investigated must influence soil apparent electrical conductivity (ECa) either directly or indirectly for EMI techniques to be effective. An increasing number and diversity of EMI sensors have been developed in response to users' needs and the availability of allied technologies, which have greatly improved the functionality of these tools and increased the amount and types of data that can be gathered with a single pass. EMI investigations provide several benefits for soil studies. The large amount of georeferenced data that can be rapidly and inexpensively collected with EMI provides more complete characterization of the spatial variations in soil properties than traditional sampling techniques. In addition, compared to traditional soil survey methods, EMI can more effectively characterize diffuse soil boundaries and identify included areas of dissimilar soils within mapped soil units, giving soil scientists greater confidence when collecting spatial soil information. EMI techniques do have limitations; results are site-specific and can vary depending on the complex interactions among multiple and variable soil properties. Despite this, EMI techniques are increasingly being used to investigate the spatial variability of soil properties at field and landscape scales. The future should witness a greater use of multiple-frequency and multiple-coil EMI sensors and integration with other sensors to assess the spatial variability of soil properties. Data analysis will be improved with advanced processing and presentation systems and more sophisticated geostatistical modeling algorithms will be developed and used to interpolate EMI data, improve the resolution of subsurface features, and assess soil properties.

[Effects of different fertilization treatments on soil humic acid structure characteristics].

PubMed

Zhao, Nan; Lü, Yi-Zhong

2012-07-01

The present article used soil humic acid as research object to study effects on the structure characteristics of soil humic acid under the condition of applying cake fertilizer, green manure, straw fertilizer with the same contents of nitrogen and phosphorus. It used element analysis, micro infrared, and solid 13C-NMR for structure analysis, the results indicated that: The chemical composition and structure characteristics of humic acids were similar, but they also had many obvious differences. (1) The atomic ratios of H/C, O/C, and C/N were all different for the humic acids, the soil humic acid of cake fertilizer processing had the highest contents of H and N, green manure processing of soil humic acid contained the highest content of O, while straw fertilizer processing of soil humic acid contained highest content of C. (2) Infrared analysis displayed that the three soil humic acids contained protein Cake fertilizer processing of soil humic acid contained the most amino compounds, green manure processing of soil humic acid contained the maximum contents of hydroxyl and aliphatic hydrocarbon, while straw fertilizer processing of soil humic acid contained the highest contents of alcohol and phenol. (3) Solid 13C-NMR data indicated that cake fertilizer processing of soil humic acid contained the most carboxyl carbon, green manure processing of soil humic acid contained the highest contents of alkyl carbon and carbonyl carbon, while straw fertilizer processing of soil humic acids had the most alkoxy carbon and aromatic carbon

Dynamic effects of root system architecture improve root water uptake in 1-D process-based soil-root hydrodynamics

NASA Astrophysics Data System (ADS)

Bouda, Martin; Saiers, James E.

2017-12-01

Root system architecture (RSA) can significantly affect plant access to water, total transpiration, as well as its partitioning by soil depth, with implications for surface heat, water, and carbon budgets. Despite recent advances in land surface model (LSM) descriptions of plant hydraulics, descriptions of RSA have not been included because of their three-dimensional complexity, which makes them generally too computationally costly. Here we demonstrate a new, process-based 1D layered model that captures the dynamic shifts in water potential gradients of 3D RSA under different soil moisture conditions: the RSA stencil. Using root systems calibrated to the rooting profiles of four plant functional types (PFT) of the Community Land Model, we show that the RSA stencil predicts plant water potentials within 2% to the outputs of a full 3D model, under the same assumptions on soil moisture heterogeneity, despite its trivial computational cost, resulting in improved predictions of water uptake and soil moisture compared to a model without RSA in a transient simulation. Our results suggest that LSM predictions of soil moisture dynamics and dependent variables can be improved by the implementation of this model, calibrated for individual PFTs using field observations.

Deterioration of soil quality and pasture production linked to overgrazing in rangelands of Extremadura (SW Spain)

NASA Astrophysics Data System (ADS)

Pulido-Fernández, Manuel; Schnabel, Susanne; Francisco Lavado Contador, Joaquín; Lozano-Parra, Javier; González López, Francisco

2015-04-01

Soil degradation phenomena include water erosion and physical and biological processes have been already reported in rangelands of southwestern Spain. The increasing of the number of domestic animals since 1986 has been highlighted as one of the key causes. The main goal of this work is to analyze the effects of the excessive number of animals on soil quality and pasture production in privately-owned farms dedicated to extensive ranching. Soil properties, soil surface cover, erosion features, pasture production and composition, rainfall and land management variables such as livestock density were analyzed during a period of 3 years (2008-2011). The study was carried out in 22 fenced units belonging to 10 farms distributed throughout the Spanish region of Extremadura. The occurrence of bare soil patches, and consequently water erosion processes, as well as an increasing in the mean values of bulk density from 5 to 10 cm in depth were observed in the fenced units with animal stocking rates exceeding 1 AU ha-1 (AU: animal cattle equivalent unit). Some indications which may serve to confirm the negative effect of increased bulk density on pasture production and quality were also found.

Predicting the Mineral Composition of Dust Aerosols. Part 1; Representing Key Processes

NASA Technical Reports Server (NTRS)

Perlwitz, J. P.; Garcia-Pando, C. Perez; Miller, R. L.

2015-01-01

Soil dust aerosols created by wind erosion are typically assigned globally uniform physical and chemical properties within Earth system models, despite known regional variations in the mineral content of the parent soil. Mineral composition of the aerosol particles is important to their interaction with climate, including shortwave absorption and radiative forcing, nucleation of cloud droplets and ice crystals, heterogeneous formation of sulfates and nitrates, and atmospheric processing of iron into bioavailable forms that increase the productivity of marine phytoplankton. Here, aerosol mineral composition is derived by extending a method that provides the composition of a wet-sieved soil. The extension accounts for measurements showing significant differences between the mineral fractions of the wetsieved soil and the emitted aerosol concentration. For example, some phyllosilicate aerosols are more prevalent at silt sizes, even though they are nearly absent at these diameters in a soil whose aggregates are dispersed by wet sieving. We calculate the emitted mass of each mineral with respect to size by accounting for the disintegration of soil aggregates during wet sieving. These aggregates are emitted during mobilization and fragmentation of the original undispersed soil that is subject to wind erosion. The emitted aggregates are carried far downwind from their parent soil. The soil mineral fractions used to calculate the aggregates also include larger particles that are suspended only in the vicinity of the source. We calculate the emitted size distribution of these particles using a normalized distribution derived from aerosol measurements. In addition, a method is proposed for mixing minerals with small impurities composed of iron oxides. These mixtures are important for transporting iron far from the dust source, because pure iron oxides are more dense and vulnerable to gravitational removal than most minerals comprising dust aerosols. A limited comparison to measurements from North Africa shows that the model extensions result in better agreement, consistent with a more extensive comparison to global observations as well as measurements of elemental composition downwind of the Sahara, as described in companion articles.

Predicting the mineral composition of dust aerosols - Part 1: Representing key processes

NASA Astrophysics Data System (ADS)

Perlwitz, J. P.; Pérez García-Pando, C.; Miller, R. L.

2015-10-01

Soil dust aerosols created by wind erosion are typically assigned globally uniform physical and chemical properties within Earth system models, despite known regional variations in the mineral content of the parent soil. Mineral composition of the aerosol particles is important to their interaction with climate, including shortwave absorption and radiative forcing, nucleation of cloud droplets and ice crystals, heterogeneous formation of sulfates and nitrates, and atmospheric processing of iron into bioavailable forms that increase the productivity of marine phytoplankton. Here, aerosol mineral composition is derived by extending a method that provides the composition of a wet-sieved soil. The extension accounts for measurements showing significant differences between the mineral fractions of the wet-sieved soil and the emitted aerosol concentration. For example, some phyllosilicate aerosols are more prevalent at silt sizes, even though they are nearly absent at these diameters in a soil whose aggregates are dispersed by wet sieving. We calculate the emitted mass of each mineral with respect to size by accounting for the disintegration of soil aggregates during wet sieving. These aggregates are emitted during mobilization and fragmentation of the original undispersed soil that is subject to wind erosion. The emitted aggregates are carried far downwind from their parent soil. The soil mineral fractions used to calculate the aggregates also include larger particles that are suspended only in the vicinity of the source. We calculate the emitted size distribution of these particles using a normalized distribution derived from aerosol measurements. In addition, a method is proposed for mixing minerals with small impurities composed of iron oxides. These mixtures are important for transporting iron far from the dust source, because pure iron oxides are more dense and vulnerable to gravitational removal than most minerals comprising dust aerosols. A limited comparison to measurements from North Africa shows that the model extensions result in better agreement, consistent with a more extensive comparison to global observations as well as measurements of elemental composition downwind of the Sahara, as described in companion articles.

Mass loss and chemical structures of wheat and maize straws in response to ultraviolet-B radiation and soil contact.

PubMed

Zhou, Guixiang; Zhang, Jiabao; Mao, Jingdong; Zhang, Congzhi; Chen, Lin; Xin, Xiuli; Zhao, Bingzi

2015-10-01

The role of photodegradation, an abiotic process, has been largely overlooked during straw decomposition in mesic ecosystems. We investigated the mass loss and chemical structures of straw decomposition in response to elevated UV-B radiation with or without soil contact over a 12-month litterbag experiment. Wheat and maize straw samples with and without soil contact were exposed to three radiation levels: a no-sunlight control, ambient solar UV-B, and artificially elevated UV-B radiation. A block control with soil contact was not included. Compared with the no-sunlight control, UV-B radiation increased the mass loss by 14-19% and the ambient radiation by 9-16% for wheat and maize straws without soil contact after 12 months. Elevated UV-B exposure decreased the decomposition rates of both wheat and maize straws when in contact with soil. Light exposure resulted in decreased O-alkyl carbons and increased alkyl carbons for both the wheat and maize straws compared with no-sunlight control. The difference in soil contact may influence the contribution of photodegradation to the overall straw decomposition process. These results indicate that we must take into account the effects of photodegradation when explaining the mechanisms of straw decomposition in mesic ecosystems.

Mass loss and chemical structures of wheat and maize straws in response to ultraviolet-B radiation and soil contact

PubMed Central

Zhou, Guixiang; Zhang, Jiabao; Mao, Jingdong; Zhang, Congzhi; Chen, Lin; Xin, Xiuli; Zhao, Bingzi

2015-01-01

The role of photodegradation, an abiotic process, has been largely overlooked during straw decomposition in mesic ecosystems. We investigated the mass loss and chemical structures of straw decomposition in response to elevated UV-B radiation with or without soil contact over a 12-month litterbag experiment. Wheat and maize straw samples with and without soil contact were exposed to three radiation levels: a no-sunlight control, ambient solar UV-B, and artificially elevated UV-B radiation. A block control with soil contact was not included. Compared with the no-sunlight control, UV-B radiation increased the mass loss by 14–19% and the ambient radiation by 9–16% for wheat and maize straws without soil contact after 12 months. Elevated UV-B exposure decreased the decomposition rates of both wheat and maize straws when in contact with soil. Light exposure resulted in decreased O-alkyl carbons and increased alkyl carbons for both the wheat and maize straws compared with no-sunlight control. The difference in soil contact may influence the contribution of photodegradation to the overall straw decomposition process. These results indicate that we must take into account the effects of photodegradation when explaining the mechanisms of straw decomposition in mesic ecosystems. PMID:26423726

Chemical and microbiological characterization of an aged PCB-contaminated soil.

PubMed

Stella, T; Covino, S; Burianová, E; Filipová, A; Křesinová, Z; Voříšková, J; Větrovský, T; Baldrian, P; Cajthaml, T

2015-11-15

This study was aimed at complex characterization of three soil samples (bulk soil, topsoil and rhizosphere soil) from a site historically contaminated with polychlorinated biphenyls (PCB). The bulk soil was the most highly contaminated, with a PCB concentration of 705.95 mg kg(-1), while the rhizosphere soil was the least contaminated (169.36 mg kg(-1)). PCB degradation intermediates, namely chlorobenzoic acids (CBAs), were detected in all the soil samples, suggesting the occurrence of microbial transformation processes over time. The higher content of organic carbon in the topsoil and rhizosphere soil than in the bulk soil could be linked to the reduced bioaccessibility (bioavailability) of these chlorinated pollutants. However, different proportions of the PCB congener contents and different bioaccessibility of the PCB homologues indicate microbial biotransformation of the compounds. The higher content of organic carbon probably also promoted the growth of microorganisms, as revealed by phospholipid fatty acid (PFLA) quantification. Tag-encoded pyrosequencing analysis showed that the bacterial community structure was significantly similar among the three soils and was predominated by Proteobacteria (44-48%) in all cases. Moreover, analysis at lower taxonomic levels pointed to the presence of genera (Sphingomonas, Bulkholderia, Arthrobacter, Bacillus) including members with reported PCB removal abilities. The fungal community was mostly represented by Basidiomycota and Ascomycota, which accounted for >80% of all the sequences detected in the three soils. Fungal taxa with biodegradation potential (Paxillus, Cryptococcus, Phoma, Mortierella) were also found. These results highlight the potential of the indigenous consortia present at the site as a starting point for PCB bioremediation processes. Copyright © 2015 Elsevier B.V. All rights reserved.

Mechanisms of Soil Carbon Sequestration

NASA Astrophysics Data System (ADS)

Lal, Rattan

2015-04-01

Carbon (C) sequestration in soil is one of the several strategies of reducing the net emission of CO2 into the atmosphere. Of the two components, soil organic C (SOC) and soil inorganic C (SIC), SOC is an important control of edaphic properties and processes. In addition to off-setting part of the anthropogenic emissions, enhancing SOC concentration to above the threshold level (~1.5-2.0%) in the root zone has numerous ancillary benefits including food and nutritional security, biodiversity, water quality, among others. Because of its critical importance in human wellbeing and nature conservancy, scientific processes must be sufficiently understood with regards to: i) the potential attainable, and actual sink capacity of SOC and SIC, ii) permanence of the C sequestered its turnover and mean residence time, iii) the amount of biomass C needed (Mg/ha/yr) to maintain and enhance SOC pool, and to create a positive C budget, iv) factors governing the depth distribution of SOC, v) physical, chemical and biological mechanisms affecting the rate of decomposition by biotic and abiotic processes, vi) role of soil aggregation in sequestration and protection of SOC and SIC pool, vii) the importance of root system and its exudates in transfer of biomass-C into the SOC pools, viii) significance of biogenic processes in formation of secondary carbonates, ix) the role of dissolved organic C (DOC) in sequestration of SOC and SIC, and x) importance of weathering of alumino-silicates (e.g., powered olivine) in SIC sequestration. Lack of understanding of these and other basic processes leads to misunderstanding, inconsistencies in interpretation of empirical data, and futile debates. Identification of site-specific management practices is also facilitated by understanding of the basic processes of sequestration of SOC and SIC. Sustainable intensification of agroecosystems -- producing more from less by enhancing the use efficiency and reducing losses of inputs, necessitates thorough understanding of the processes, factors and causes of SOC and SIC dynamics in soils of natural and managed ecosystems.

SOIL - A new open access journal of the European Geosciences Union

NASA Astrophysics Data System (ADS)

Brevik, Eric; Mataix-Solera, Jorge; Pereg, Lily; Quinton, John; Six, Johan; Van Oost, Kristof; Cerdà, Artemi

2014-05-01

The Soil System Sciences (SSS) division of the EGU has been a strong and growing international research force in the last few years. Since the first EGU meeting with SSS participation in 2004 where 200 abstracts were presented in 7 sessions, the contribution of the SSS division has grown considerably, with 1,427 abstracts presented in 57 SSS sessions at the 2013 EGU General Assembly. After 10 years of active participation, the SSS Division has developed a new open access journal, SOIL, which will serve the whole EGU membership. SOIL intends to publish scientific research that will contribute to understanding the Soil System and its interaction with humans and the entire Earth System. The scope of the journal will include all topics that fall within the study of soil science as a discipline, with an emphasis on studies that integrate soil science with other sciences (Soils and plants, Soils and water, Soils and atmosphere, Soils and biogeochemical cycling, Soils and the natural environment, Soils and the human environment, Soils and food security, Soils and biodiversity, Soils and global change, Soils and health, Soil as a resource, Soil systems, Soil degradation (chemical, physical and biological), Soil protection and remediation (including soil monitoring), Soils and methodologies). Manuscript types considered for publication in SOIL are original research articles, review articles, short communications, forum articles, and letters to the editors. SOIL will also publish up to two special issues on thematic subjects per year and encourages conveners of innovative sessions at the EGU meeting to submit proposals for special issues to the executive editor who oversees special issues. As with other EGU journals, SOIL has a two-stage publication process. In the first stage, papers that pass a rapid access-review by one of the editors will immediately be published in SOIL Discussions (SOIL-D). Papers will then be subject to interactive public discussion, during which the referees' comments (anonymous or attributed), additional short comments by other members of the scientific community (attributed), and the author's replies will also be published in SOIL-D. In the second stage, a peer-review and revision process is completed and, if accepted, finalized papers are published in SOIL. To ensure publication precedence for authors, and to provide a lasting record of scientific discussion, SOIL-D and SOIL are both ISSN-registered, permanently archived, and fully citable. SOIL has a team of five executive editors who work together to oversee the running of the journal. Those executive editors, and their areas of primary oversight, are Eric Brevik (Review Article Editor), Jorge Mataix-Solera (Special Issues Editor), John Quinton (Awards and Recognitions Editor), Johan Six (Managing Editor), and Kristof Van Oost (Forum Article Editor). SOIL also has 46 associate editors. Manuscripts can be submitted to SOIL at the journal's website (http://www.soil-journal.net/home.html) beginning in May 2014. The first issue will be published January of 2015. Publication fees will be waived for the first two years of publication.

Quantifying agricultural drought impacts using soil moisture model and drought indices in South Korea

NASA Astrophysics Data System (ADS)

Nam, W. H.; Bang, N.; Hong, E. M.; Pachepsky, Y. A.; Han, K. H.; Cho, H.; Ok, J.; Hong, S. Y.

2017-12-01

Agricultural drought is defined as a combination of abnormal deficiency of precipitation, increased crop evapotranspiration demands from high-temperature anomalies, and soil moisture deficits during the crop growth period. Soil moisture variability and their spatio-temporal trends is a key component of the hydrological balance, which determines the crop production and drought stresses in the context of agriculture. In 2017, South Korea has identified the extreme drought event, the worst in one hundred years according to the South Korean government. The objective of this study is to quantify agricultural drought impacts using observed and simulated soil moisture, and various drought indices. A soil water balance model is used to simulate the soil water content in the crop root zone under rain-fed (no irrigation) conditions. The model used includes physical process using estimated effective rainfall, infiltration, redistribution in soil water zone, and plant water uptake in the form of actual crop evapotranspiration. Three widely used drought indices, including the Standardized Precipitation Index (SPI), the Standardized Precipitation Evapotranspiration Index (SPEI), and the Self-Calibrated Palmer Drought Severity Index (SC-PDSI) are compared with the observed and simulated soil moisture in the context of agricultural drought impacts. These results demonstrated that the soil moisture model could be an effective tool to provide improved spatial and temporal drought monitoring for drought policy.

Molecular characterization of biochars and their influence on microbiological properties of soil.

PubMed

Chintala, Rajesh; Schumacher, Thomas E; Kumar, Sandeep; Malo, Douglas D; Rice, James A; Bleakley, Bruce; Chilom, Gabriela; Clay, David E; Julson, James L; Papiernik, Sharon K; Gu, Zheng Rong

2014-08-30

The tentative connection between the biochar surface chemical properties and their influence on microbially mediated mineralization of C, N, and S with the help of enzymes is not well established. This study was designed to investigate the effect of different biomass conversion processes (microwave pyrolysis, carbon optimized gasification, and fast pyrolysis using electricity) on the composition and surface chemistry of biochar materials produced from corn stover (Zea mays L.), switchgrass (Panicum virgatum L.), and Ponderosa pine wood residue (Pinus ponderosa Lawson and C. Lawson) and determine the effect of biochars on mineralization of C, N, and S and associated soil enzymatic activities including esterase (fluorescein diacetate hydrolase, FDA), dehydrogenase (DHA), β-glucosidase (GLU), protease (PROT), and aryl sulfatase (ARSUL) in two different soils collected from footslope (Brookings) and crest (Maddock) positions of a landscape. Chemical properties of biochar materials produced from different batches of gasification process were fairly consistent. Biochar materials were found to be highly hydrophobic (low H/C values) with high aromaticity, irrespective of biomass feedstock and pyrolytic process. The short term incubation study showed that biochar had negative effects on microbial activity (FDA and DHA) and some enzymes including β-glucosidase and protease. Published by Elsevier B.V.

Soil fauna, soil properties and geo-ecosystem functioning

NASA Astrophysics Data System (ADS)

Cammeraat, L. H.

2012-04-01

The impact of soil fauna on soil processes is of utmost importance, as the activity of soil fauna directly affects soil quality. This is expressed by the direct effects of soil fauna on soil physical and soil chemical properties that not only have great importance to food production and ecosystems services, but also on weathering and hydrological and geomorphological processes. Soil animals can be perceived as ecosystem engineers that directly affect the flow of water, sediments and nutrients through terrestrial ecosystems. The biodiversity of animals living in the soil is huge and shows a huge range in size, functions and effects. Most work has been focused on only a few species such as earthworms and termites, but in general the knowledge on the effect of soil biota on soil ecosystem functioning is limited as it is for their impact on processes in the soil and on the soil surface. In this presentation we would like to review some of the impacts of soil fauna on soil properties that have implications for geo-ecosystem functioning and soil formation processes.

Positive responses of belowground C dynamics to nitrogen enrichment in China.

PubMed

Deng, Lei; Peng, Changhui; Zhu, Guangyu; Chen, Lei; Liu, Yulin; Shangguan, Zhouping

2018-03-01

Determining how nitrogen (N) impacts ecosystem carbon (C) cycling is critical to using C sequestration to offset anthropogenic CO 2 emissions. The N deposition rate in China is higher than the global average; however, many results of N enrichment experiments in China have not been included in global syntheses. In this study, we assembled a large dataset that comprised 124 published studies concerning N addition experiments, including 570 observations at 127 sites across China, to quantify the responses of belowground C dynamics to N enrichment in terrestrial ecosystems in China by a meta-analysis. The results showed that overall soil organic C, dissolved organic C (DOC) and soil microbial biomass C (MBC) increased by 1.8, 7.4, and 8.8%, respectively (P<0.05), in response to N enrichment; belowground biomass and litter increased by 14.6 and 24.4%, respectively (P<0.05); and soil respiration increased by 6.1% (P<0.05). N enrichment promoted C inputs into the soil mainly by increasing litter and belowground biomass inputs. Additionally, N enrichment increased C output by increasing soil respiration. Land use type and N addition level had different impacts on the soil C pool and on soil respiration. DOC, MBC, and litter exhibited more positive responses to N deposition in cooler and more arid regions than in other regions. The meta-analysis indicated that N enrichment had a positive impact on belowground C cycles in China. Climate played a greater role than did N deposition level in affecting processes of ecosystem C cycling. Moreover, belowground C cycle processes are determined by complicated interactions among land use type, N enrichment, and climate. Copyright © 2017 Elsevier B.V. All rights reserved.

Understanding controls of hydrologic processes across two monolithological catchments using model-data integration

NASA Astrophysics Data System (ADS)

Xiao, D.; Shi, Y.; Li, L.

2016-12-01

Field measurements are important to understand the fluxes of water, energy, sediment, and solute in the Critical Zone however are expensive in time, money, and labor. This study aims to assess the model predictability of hydrological processes in a watershed using information from another intensively-measured watershed. We compare two watersheds of different lithology using national datasets, field measurements, and physics-based model, Flux-PIHM. We focus on two monolithological, forested watersheds under the same climate in the Shale Hills Susquehanna CZO in central Pennsylvania: the Shale-based Shale Hills (SSH, 0.08 km2) and the sandstone-based Garner Run (GR, 1.34 km2). We firstly tested the transferability of calibration coefficients from SSH to GR. We found that without any calibration the model can successfully predict seasonal average soil moisture and discharge which shows the advantage of a physics-based model, however, cannot precisely capture some peaks or the runoff in summer. The model reproduces the GR field data better after calibrating the soil hydrology parameters. In particular, the percentage of sand turns out to be a critical parameter in reproducing data. With sandstone being the dominant lithology, GR has much higher sand percentage than SSH (48.02% vs. 29.01%), leading to higher hydraulic conductivity, lower overall water storage capacity, and in general lower soil moisture. This is consistent with area averaged soil moisture observations using the cosmic-ray soil moisture observing system (COSMOS) at the two sites. This work indicates that some parameters, including evapotranspiration parameters, are transferrable due to similar climatic and land cover conditions. However, the key parameters that control soil moisture, including the sand percentage, need to be recalibrated, reflecting the key role of soil hydrological properties.

Towards a rigorous mesoscale modeling of reactive flow and transport in an evolving porous medium and its applications to soil science

NASA Astrophysics Data System (ADS)

Ray, Nadja; Rupp, Andreas; Knabner, Peter

2016-04-01

Soil is arguably the most prominent example of a natural porous medium that is composed of a porous matrix and a pore space. Within this framework and in terms of soil's heterogeneity, we first consider transport and fluid flow at the pore scale. From there, we develop a mechanistic model and upscale it mathematically to transfer our model from the small scale to that of the mesoscale (laboratory scale). The mathematical framework of (periodic) homogenization (in principal) rigorously facilitates such processes by exactly computing the effective coefficients/parameters by means of the pore geometry and processes. In our model, various small-scale soil processes may be taken into account: molecular diffusion, convection, drift emerging from electric forces, and homogeneous reactions of chemical species in a solvent. Additionally, our model may consider heterogeneous reactions at the porous matrix, thus altering both the porosity and the matrix. Moreover, our model may additionally address biophysical processes, such as the growth of biofilms and how this affects the shape of the pore space. Both of the latter processes result in an intrinsically variable soil structure in space and time. Upscaling such models under the assumption of a locally periodic setting must be performed meticulously to preserve information regarding the complex coupling of processes in the evolving heterogeneous medium. Generally, a micro-macro model emerges that is then comprised of several levels of couplings: Macroscopic equations that describe the transport and fluid flow at the scale of the porous medium (mesoscale) include averaged time- and space-dependent coefficient functions. These functions may be explicitly computed by means of auxiliary cell problems (microscale). Finally, the pore space in which the cell problems are defined is time- and space dependent and its geometry inherits information from the transport equation's solutions. Numerical computations using mixed finite elements and potentially random initial data, e.g. that of porosity, complement our theoretical results. Our investigations contribute to the theoretical understanding of the link between soil formation and soil functions. This general framework may be applied to various problems in soil science for a range of scales, such as the formation and turnover of microaggregates or soil remediation.

Processes Affecting the Annual Surface Energy Budget at High-Latitude Terrestrial Sites

NASA Astrophysics Data System (ADS)

Persson, P. O. G.; Stone, R. S.; Grachev, A.; Matrosova, L.

2012-04-01

Instrumentation at four Study of Environmental Arctic Change (SEARCH) sites (Barrow, Eureka, Alert, and Tiksi) have been enhanced in the past 6 years, including during the 2007-2008 IPY. Data from these sites are used to investigate the annual cycle of the surface energy budget (SEB), its coupling to atmospheric processes, and for Alert, its interannual variability. The comprehensive data sets are useful for showing interactions between the atmosphere, surface, and soil at high temporal resolution throughout the annual cycle. Processes that govern the SEB variability at each site are identified, and their impacts on the SEB are quantified. For example, mesoscale modulation of the SEB caused by forcing from the local terrain (downslope wind events) and coastlines (sea and land breezes) are significant at Alert and Eureka, with these processes affecting both radiative, turbulent, and ground heat flux terms in the SEB. Sub-seasonal and interannual variations in atmospheric processes and SEB impact soil thermal structures, such as the depth and timing of the summer active layer. These analyses provide an improved understanding of the processes producing changes in surface and soil temperature, linking them through the SEB as affected by atmospheric processes.

Computer simulation of a space SAR using a range-sequential processor for soil moisture mapping

NASA Technical Reports Server (NTRS)

Fujita, M.; Ulaby, F. (Principal Investigator)

1982-01-01

The ability of a spaceborne synthetic aperture radar (SAR) to detect soil moisture was evaluated by means of a computer simulation technique. The computer simulation package includes coherent processing of the SAR data using a range-sequential processor, which can be set up through hardware implementations, thereby reducing the amount of telemetry involved. With such a processing approach, it is possible to monitor the earth's surface on a continuous basis, since data storage requirements can be easily met through the use of currently available technology. The Development of the simulation package is described, followed by an examination of the application of the technique to actual environments. The results indicate that in estimating soil moisture content with a four-look processor, the difference between the assumed and estimated values of soil moisture is within + or - 20% of field capacity for 62% of the pixels for agricultural terrain and for 53% of the pixels for hilly terrain. The estimation accuracy for soil moisture may be improved by reducing the effect of fading through non-coherent averaging.

Exogenic geomorphic processes dynamics at the Black Sea coast, Russia

NASA Astrophysics Data System (ADS)

Kuznetsova, Yulia; Tsvetkova, Daria

2017-04-01

Nowadays there is an obvious grow of anthropogenic load going on in many areas worldwide. Under such conditions, intensive activation of a number of exogenic geomorphic processes may be observed. Moreover, if natural environment is aggressive itself their dynamics and rates may reach enormous values. Our work is conducted at the Black Sea coast, known for its mountainous topography, wet subtropical climate and intensive anthropogenic development (especially during the last decade due to the recent Olympic games). We chose two key basins near Sochi, Russia to study a number of presented exogenic processes, including rill, gully and channel erosion, weathering, suffusion and piping, soil creep. A set of field study methods is used to monitor the processes dynamics since 2005 (and late 1970s for soil creep). In addition, soil erosion rates and landslide susceptibility were modelled to get information of the watersheds dynamics. This is ongoing work, but the results of the passed period of observations will be resented. Special attention is paid to the processes connectivity and their input into sediment redistribution over the river basins.

The distribution of Listeria in pasture-raised broiler farm soils is potentially related to University of Vermont medium enrichment bias toward Listeria innocua over Listeria monocytogenes.

USDA-ARS?s Scientific Manuscript database

The occurrence of Listeria monocytogenes (LM) has been widely investigated in the poultry production chain from the processing plant to the final product. However, limited data are available on Listeria spp., including LM, in the poultry farm environment. Therefore, fecal and soil samples from 37 pa...

Soil Biogeochemical and Biophysical Footprint of Forest to Pasture Conversion in the Western Pyrenees Mountains, France

NASA Astrophysics Data System (ADS)

Leigh, D.; Gragson, T. L.

2017-12-01

Summits of the humid-temperate western Pyrenees were converted from mixed forests to managed grasslands thousands of years ago, including use of fire. We hypothesize differences in soil chemical and physical traits evolved because of this transformation. Paired forest versus grassland soils were sampled at four separate hillslope sites having a clear boundary between the two vegetation types. Factors of climate, topography, parent material, and time of soil formation were essentially identical in the forests and pastures of each site, but the time of soil under grassland vegetation may have varied. Each paired hillslope site included five core samples from the upper 7.6 cm of the mineral soil within each vegetation type and the A horizon thickness was recorded at each core hole. In addition, one complete soil profile was sampled in each vegetation type at each site, making a total of 20 core samples and 4 complete profiles from each respective vegetation type. Analyses included bulk density, pH, plant-available nutrients, organic matter, fulvic versus humic acids, total carbon and nitrogen, amorphous silica, and charcoal content. Results indicate pastured A horizons are about three times as thick as forested soils, contain more organic matter, and have lower bulk densities. These traits favor much greater infiltration and water holding capacities of the pastured soils, which we validated with saturated hydraulic conductivity tests. Melanization has been more pronounced in the managed pastures, which contain significantly more humic acids than forests. Significantly more charcoal (black carbon) is present in the pastured soils from long-term use of fire, and having implications for sequestration of carbon. Pastures register significantly higher soil magnetic susceptibility than forests, also related to past use of fire as a management tool. Pastures contain greater contents of amorphous silica due to more rapid phytolith production from grasses as opposed to trees. Anthropic manipulation of the biotic factor of pedogenesis has created new soil materials, processes, and functions. Our results indicate better soil quality in pastured soils, counter to stereotypical concepts of soil degradation due to grazing, and having important implications for soil sustainability

Mixed region reactors for in situ treatment of DNAPL contaminated low permeability media

DOE Office of Scientific and Technical Information (OSTI.GOV)

West, O.R.; Siegrist, R.L.

1996-08-01

Fine-textured soils and sediments contaminated by dense non-aqueous phase liquids (DNAPLs) present a significant environmental restoration challenge. An emerging approach to rapid in situ treatment within low permeability media involves the use of soil mixing to create mixed region reactors wherein biological or physical/chemical treatment processes can be employed. In cohesive soils, mixing breaks up the original soil structure and produces soil aggregates or clods separated by interaggregate void spaces. These void spaces create preferential flow paths for more efficient extraction of contaminants from the soil matrix or more rapid diffusion of treatment agents into the soil aggregates. This enhancementmore » technology has been most successfully used with vapor stripping. However, other technologies can also be coupled with soil mixing including chemical degradation, biodegradation and solidification. The application of this technology to DNAPL-contaminated low permeability media appears promising but requires further experiments and models that can simulate the movement of DNAPLs in mixed regions. 11 refs., 6 figs.« less

Assessment of Two Solid Anaerobic Digestate Soil Amendments for Effects on Soil Quality and Biosolarization Efficacy.

PubMed

Fernández-Bayo, Jesús D; Achmon, Yigal; Harrold, Duff R; McCurry, Dlinka G; Hernandez, Katie; Dahlquist-Willard, Ruth M; Stapleton, James J; VanderGheynst, Jean S; Simmons, Christopher W

2017-05-03

Anaerobic digestion is an organic waste bioconversion process that produces biofuel and digestates. Digestates have potential to be applied as soil amendment to improve properties for crop production including phytonutrient content and pest load. Our objective was to assess the impact of solid anaerobic digestates on weed seed inactivation and soil quality upon soil biosolarization (a pest control technique that combines solar heating and amendment-induced microbial activity). Two solid digestates from thermophilic (TD) and mesophilic (MD) digesters were tested. The solarized TD-amended samples presented significantly higher mortality of Brassica nigra (71%, P = 0.032) than its equivalent incubated at room temperature. However, biosolarization with digestate amendment led to decreased weed seed mortality in certain treatments. The plant-available water, total C, and extractable P and K were significantly increased (P < 0.05) in the incubated amended soils. The results confirm the potential of digestates as beneficial soil amendments. Further studies are needed to elucidate the impacts of digestate stability on biosolarization efficacy and soil properties.

[Relationships between soil and rocky desertification in typical karst mountain area based on redundancy analysis].

PubMed

Long, Jian; Liao, Hong-Kai; Li, Juan; Chen, Cai-Yun

2012-06-01

Redundancy analysis (RDA) was employed to reveal the relationships between soil and rocky desertification through vegetation investigation and analysis of soil samples collected in typical karst mountain area of southwest Guizhou Province. The results showed that except TP, TK and ACa, all other variables including SOC, TN, MBC, ROC, DOC, available nutrients and basal respiration showed significant downward trends during the rocky desertification process. RDA results showed significant correlations between different types of desertification and soil variables, described as non-degraded > potential desertification > light desertification > moderate desertification > severe desertification. Moreover, RDA showed that using SOC, TN, AN, and BD as soil indicators, 74.4% of the variance information on soil and rocky desertification could be explained. Furthermore, the results of correlation analysis showed that soil variables were significantly affected by surface vegetation. Considering the ecological function of the aboveground vegetation and the soil quality, Zanthoxylum would be a good choice for restoration of local vegetation in karst mountain area.

A Simple and Accurate Rate-Driven Infiltration Model

NASA Astrophysics Data System (ADS)

Cui, G.; Zhu, J.

2017-12-01

In this study, we develop a novel Rate-Driven Infiltration Model (RDIMOD) for simulating infiltration into soils. Unlike traditional methods, RDIMOD avoids numerically solving the highly non-linear Richards equation or simply modeling with empirical parameters. RDIMOD employs infiltration rate as model input to simulate one-dimensional infiltration process by solving an ordinary differential equation. The model can simulate the evolutions of wetting front, infiltration rate, and cumulative infiltration on any surface slope including vertical and horizontal directions. Comparing to the results from the Richards equation for both vertical infiltration and horizontal infiltration, RDIMOD simply and accurately predicts infiltration processes for any type of soils and soil hydraulic models without numerical difficulty. Taking into account the accuracy, capability, and computational effectiveness and stability, RDIMOD can be used in large-scale hydrologic and land-atmosphere modeling.

The Tale of a Neglected Energy Source: Elevated Hydrogen Exposure Affects both Microbial Diversity and Function in Soil.

PubMed

Khdhiri, Mondher; Piché-Choquette, Sarah; Tremblay, Julien; Tringe, Susannah G; Constant, Philippe

2017-06-01

The enrichment of H 2 -oxidizing bacteria (HOB) by H 2 generated by nitrogen-fixing nodules has been shown to have a fertilization effect on several different crops. The benefit of HOB is attributed to their production of plant growth-promoting factors, yet their interactions with other members of soil microbial communities have received little attention. Here we report that the energy potential of H 2 , when supplied to soil, alters ecological niche partitioning of bacteria and fungi, with multifaceted consequences for both generalist and specialist microbial functions. We used dynamic microcosms to expose soil to the typical atmospheric H 2 mixing ratio (0.5 ppmv) permeating soils, as well as mixing ratios comparable to those found at the soil-nodule interface (10,000 ppmv). Elevated H 2 exposure exerted direct effects on two HOB subpopulations distinguished by their affinity for H 2 while enhancing community level carbon substrate utilization potential and lowering CH 4 uptake activity in soil. We found that H 2 triggered changes in the abundance of microorganisms that were reproducible yet inconsistent across soils at the taxonomic level and even among HOB. Overall, H 2 exposure altered microbial process rates at an intensity that depends upon soil abiotic and biotic features. We argue that further examination of direct and indirect effects of H 2 on soil microbial communities will lead to a better understanding of the H 2 fertilization effect and soil biogeochemical processes. IMPORTANCE An innovative dynamic microcosm chamber system was used to demonstrate that H 2 diffusing in soil triggers changes in the distribution of HOB and non-HOB. Although the response was uneven at the taxonomic level, an unexpected coordinated response of microbial functions was observed, including abatement of CH 4 oxidation activity and stimulation of carbon turnover. Our work suggests that elevated H 2 rewires soil biogeochemical structure through a combination of direct effects on the growth and persistence of HOB and indirect effects on a variety of microbial processes involving HOB and non-HOB. Copyright © 2017 American Society for Microbiology.

Self-organizing biochemical cycle in dynamic feedback with soil structure

NASA Astrophysics Data System (ADS)

Vasilyeva, Nadezda; Vladimirov, Artem; Smirnov, Alexander; Matveev, Sergey; Tyrtyshnikov, Evgeniy; Yudina, Anna; Milanovskiy, Evgeniy; Shein, Evgeniy

2016-04-01

In the present study we perform bifurcation analysis of a physically-based mathematical model of self-organized structures in soil (Vasilyeva et al., 2015). The state variables in this model included microbial biomass, two organic matter types, oxygen, carbon dioxide, water content and capillary pore size. According to our previous experimental studies, organic matter affinity to water is an important property affecting soil structure. Therefore, organic matter wettability was taken as principle distinction between organic matter types in this model. It considers general known biological feedbacks with soil physical properties formulated as a system of parabolic type non-linear partial differential equations with elements of discrete modeling for water and pore formation. The model shows complex behavior, involving emergence of temporal and spatial irregular auto-oscillations from initially homogeneous distributions. The energy of external impact on a system was defined by a constant oxygen level on the boundary. Non-linear as opposed to linear oxygen diffusion gives possibility of modeling anaerobic micro-zones formation (organic matter conservation mechanism). For the current study we also introduced population competition of three different types of microorganisms according to their mobility/feeding (diffusive, moving and fungal growth). The strongly non-linear system was solved and parameterized by time-optimized algorithm combining explicit and implicit (matrix form of Thomas algorithm) methods considering the time for execution of the evaluated time-step according to accuracy control. The integral flux of the CO2 state variable was used as a macroscopic parameter to describe system as a whole and validation was carried out on temperature series of moisture dependence for soil heterotrophic respiration data. Thus, soil heterotrophic respiration can be naturally modeled as an integral result of complex dynamics on microscale, arising from biological processes formulated as a sum of state variables products, with no need to introduce any saturation functions, such as Mikhaelis-Menten type kinetics, inside the model. Analyzed dynamic soil model is being further developed to describe soil structure formation and its effect on organic matter decomposition at macro-scale, to predict changes with external perturbations. To link micro- and macro-scales we additionally model soil particles aggregation process. The results from local biochemical soil organic matter cycle serve as inputs to aggregation process, while the output aggregate size distributions define physical properties in the soil profile, these in turn serve as dynamic parameters in local biochemical cycles. The additional formulation is a system of non-linear ordinary differential equations, including Smoluchowski-type equations for aggregation and reaction kinetics equations for coagulation/adsorption/adhesion processes. Vasilyeva N.A., Ingtem J.G., Silaev D.A. Nonlinear dynamical model of microbial growth in soil medium. Computational Mathematics and Modeling, vol. 49, p.31-44, 2015 (in Russian). English version is expected in corresponding vol.27, issue 2, 2016.

Soil Science Education for Primary and Secondary Students

NASA Astrophysics Data System (ADS)

Sparrow, Elena; Yoshikawa, Kenji; Kopplin, Martha

2013-04-01

Soils is one of the science investigation areas in the Global learning and Observations to Benefit the Environment (GLOBE), an international science and education program (112 countries) that teaches primary and secondary students to learn science by doing science. For each area of investigation GLOBE provides background information, measurement protocols and learning activities compiled as a chapter in the GLOBE Teacher's Guide. Also provided are data sheets and field guides to assist in the accurate collection of data as well as suggestions of scientific instruments and calibration methods. Teachers learn GLOBE scientific measurement protocols at professional development workshops led by scientists and educators, who then engage their students in soil studies that also contribute to ongoing science investigations. Students enter their data on the GLOBE website and can access their data as well as other data contributed by students from other parts of the world. Soil characterization measurements carried out in the field include site description, horizon depths, soil structure, soil color, soil consistence, soil texture, roots, rocks and carbonates. Other field measurements are soil temperature and soil moisture monitoring while the following measurements are carried out in the classroom or laboratory: gravimetric soil moisture, bulk density, particle density, particle size distribution, pH and soil fertility (nitrogen, phosphorus and potassium). Learning activities provide support for preparing students to do the measurements and for better understanding of science concepts. Many countries in GLOBE have adopted standards for education including science education with commonalities among them. For the Teacher's Guide, the National Science Education Standards published by the US National Academy of Sciences, selected additional content standards that GLOBE scientists and educators feel are appropriate and the National Geography Standards prepared by the (US) National Education Standards Project, are being used. Educational objectives for students include gaining scientific inquiry abilities in addition to understanding scientific concepts. The Soils chapter also includes some suggestions for managing students in the field and classroom. A new protocol has also been developed by the Seasons and Biomes project, one of the GLOBE earth system science projects. Active Layer monitoring uses a Frost Tube that measures when and how deeply soil freezes and is currently being used in more than 200 sites in Alaska. Teachers have successfully implemented soil studies in their curriculum and have used it to teach about the science process.

Connections between transport in events and transport at landscape-structuring timescales

NASA Astrophysics Data System (ADS)

Harman, C. J.; Lohse, K. A.; Troch, P. A.; Sivapalan, M.

2012-12-01

Complex spatial and temporal variability can arise in the critical zone when feedbacks occur at multiple time scales between transported materials and the landscape and soils through which it is transported. This is clearly illustrated where geomorphic transport processes, soil development, and vegetation interact in semi-arid shrublands. Here we use soil and terrain data and a numerical model of overland flow on semi-arid hillslopes to show that microtopography can generate spatial variations in the dominance of transport processes operating at different timescales, with consequences for the direction of resource redistribution between functional units within these ecosystems. Conceptual and numerical models of the redistribution of mineral, organic and water have mostly been developed on low-gradient alluvial fans and pediments. These have focused on the fluvial transport of resources from the inter-spaces between shrub canopies to the areas below the canopy in those few storm events that generate significant run-off. These processes are believed to produce a mosaic of resource islands in which biota are concentrated. We investigated the spatial distribution of soil properties (including organic matter and soil hydraulic properties), vegetation, and microtopography on two steeper hillslopes of contrasting lithology (one granite, one schist) in the Sonoran desert foothills of the Catalina Mountains. Three hypotheses were developed through iteration between fieldwork and data analysis. These tested whether there were significant differences in soil composition and hydraulic properties below- and between-canopy, whether the surface soil organic matter was directly associated with above-ground biomass, and whether soil organic matter distributions measured along transects below shrubs showed downslope asymmetries indicative of the processes that create them. Data from these sites were used in a numerical model to investigate how these structures could be related to the population of runoff events and processes that generate them. The results suggest that over the long term, slope-dependent transport processes (such as rainsplash, bioturbation and trampling) seem to play an important role in these steeper hillslopes in inverting the flow of resources. Over many storm and inter-storm periods, soil organic matter is transported downslope in plumes extending at least two canopy radii downslope from below woody-shrub canopies into the inter-space. This pattern was particularly evident where microtopography and soil properties create micro-sites protected from fluvial transport. While many of the patterns observed are similar to those from more stable geomorphic surfaces, the results suggest that long-term downslope transport processes in sloping terrain can disrupt the autogenic processes that reinforce the redistribution of resources under shrubs. This result has important implications for our understanding of the relationship between ecosystem function and landscape-scale transport in these environments.

Exoenzyme activity in contaminated soils before and after soil washing: ß-glucosidase activity as a biological indicator of soil health.

PubMed

Chae, Yooeun; Cui, Rongxue; Woong Kim, Shin; An, Gyeonghyeon; Jeong, Seung-Woo; An, Youn-Joo

2017-01-01

It is essential to remediate or amend soils contaminated with various heavy metals or pollutants so that the soils may be used again safely. Verifying that the remediated or amended soils meet soil quality standards is an important part of the process. We estimated the activity levels of eight soil exoenzymes (acid phosphatase, arylsulfatase, catalase, dehydrogenase, fluorescein diacetate hydrolase, protease, urease, and ß-glucosidase) in contaminated and remediated soils from two sites near a non-ferrous metal smelter, using colorimetric and titrimetric determination methods. Our results provided the levels of activity of soil exoenzymes that indicate soil health. Most enzymes showed lower activity levels in remediated soils than in contaminated soils, with the exception of protease and urease, which showed higher activity after remediation in some soils, perhaps due to the limited nutrients available in remediated soils. Soil exoenzymes showed significantly higher activity in soils from one of the sites than from the other, due to improper conditions at the second site, including high pH, poor nutrient levels, and a high proportion of sand in the latter soil. Principal component analysis revealed that ß-glucosidase was the best indicator of soil ecosystem health, among the enzymes evaluated. We recommend using ß-glucosidase enzyme activity as a prior indicator in estimating soil ecosystem health. Copyright © 2016 Elsevier Inc. All rights reserved.

36 CFR 6.3 - Definitions.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Waste Landfills at 40 CFR 258.60 and 258.61. Compostible materials means organic substances that decay... water, air, soils, geological features, including subsurface strata, the natural processes and...

36 CFR 6.3 - Definitions.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Waste Landfills at 40 CFR 258.60 and 258.61. Compostible materials means organic substances that decay... water, air, soils, geological features, including subsurface strata, the natural processes and...

36 CFR 6.3 - Definitions.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Waste Landfills at 40 CFR 258.60 and 258.61. Compostible materials means organic substances that decay... water, air, soils, geological features, including subsurface strata, the natural processes and...

Caresoil: A multidisciplinar Project to characterize, remediate, monitor and evaluate the risk of contaminated soils in Madrid (Spain)

NASA Astrophysics Data System (ADS)

Muñoz-Martín, Alfonso; Antón, Loreto; Granja, Jose Luis; Villarroya, Fermín; Montero, Esperanza; Rodríguez, Vanesa

2016-04-01

Soil contamination can come from diffuse sources (air deposition, agriculture, etc.) or local sources, these last being related to anthropogenic activities that are potentially soil contaminating activities. According to data from the EU, in Spain, and particularly for the Autonomous Community of Madrid, it can be considered that heavy metals, toxic organic compounds (including Non Aqueous Phases Liquids, NAPLs) and combinations of both are the main problem of point sources of soil contamination in our community. The five aspects that will be applied in Caresoil Program (S2013/MAE-2739) in the analysis and remediation of a local soil contamination are: 1) the location of the source of contamination and characterization of soil and aquifer concerned, 2) evaluation of the dispersion of the plume, 3) application of effective remediation techniques, 4) monitoring the evolution of the contaminated soil and 5) risk analysis throughout this process. These aspects involve advanced technologies (hydrogeology, geophysics, geochemistry,...) that require new developing of knowledge, being necessary the contribution of several researching groups specialized in the fields previously cited, as they are those integrating CARESOIL Program. Actually two cases concerning hydrocarbon spills, as representative examples of soil local contamination in Madrid area, are being studied. The first is being remediated and we are monitoring this process to evaluate its effectiveness. In the second location we are defining the extent of contamination in soil and aquifer to define the most effective remediation technique.

Application of a participative process for DSS development in soil remediation

NASA Astrophysics Data System (ADS)

José Blanco-Velázquez, Francisco; Muñoz-Vallés, Sara; Anaya-Romero, María

2017-04-01

A wide range of current legislation concerning environmental protection and public health at the national and international level include mandatory actions related to site characterization and the implementation of effective soil remediation measures. The efficiency, in terms of reliability and costs, of this kind of assessment, involves the development and linkage of integrated-harmonized databases, simulating models and specialization tools. So far, no data/knowledge engineering technologies in the academy or market provides the possibility for simulating soil remediation processes for hypothetic spatio-temporal scenarios in a harmonized manner across Europe. In this context, under the framework of RECARE (Preventing and Remediating degradation of Soils in Europe through Land Care) project, we are designing a Decision Support System (DSS) comprising a large database of knowledge including soil, climatic and socio-economic attributes, focused on soil remediation techniques that allows the user to automatically perform a more accurate quantifying of soil pollution, spatial identification of vulnerable zones and formulation of action programs to deal with the particular problem under scenarios of climate and land-use changes. The pilot study area is the Guadiamar valley (SW Spain) where the main threat is soil contamination, after a mine spill occurred on April 1998. About four hm3 of acid waters and two hm3 of mud, rich in heavy metals, were released into the Agrio and Guadiamar rivers affecting more than 4,600 ha of agricultural and pasture land. Consequently, the area was subjected to a large-scale phyto-management project, including the removal of sludge and topsoil, the addition of amendments, and plantation of native shrubs and trees. The objective of this research is to test the feasibility of the DSS concept as well as the likelihood to establish a solid high-potential innovation tool, aligned with the scientific and market strategy and within a European dimension. To this aim, we used a participative process during a workshop carried out in 2016, to validate the tool concept through stakeholder involvement. The target group was composed of representatives from the public administration, academic and private sectors and enabled a transdisciplinary learning process for the DSS implementation. The most interesting and valued issue of the DSS was the capacity to simulate the evolution of physical and chemical characteristics of soil at diverse spatio-temporal scales. On the other hand, it was stated that this approach could be useful to estimate economic criteria, but not to predict socio-cultural patterns. The results obtained from the workshop help to organize the base of knowledge for the DSS according to the main associated users. In the next workshop, further criteria related with the evaluation of ecosystem services predicted by the DSS is being carried out. In addition, a multilingual open source survey is been used to encourage and facilitate wider involvement of stakeholders in other case studies across Europe.

Carbon allocation and carbon isotope fluxes in the plant-soil-atmosphere continuum: a review

NASA Astrophysics Data System (ADS)

Brüggemann, N.; Gessler, A.; Kayler, Z.; Keel, S. G.; Badeck, F.; Barthel, M.; Boeckx, P.; Buchmann, N.; Brugnoli, E.; Esperschütz, J.; Gavrichkova, O.; Ghashghaie, J.; Gomez-Casanovas, N.; Keitel, C.; Knohl, A.; Kuptz, D.; Palacio, S.; Salmon, Y.; Uchida, Y.; Bahn, M.

2011-11-01

The terrestrial carbon (C) cycle has received increasing interest over the past few decades, however, there is still a lack of understanding of the fate of newly assimilated C allocated within plants and to the soil, stored within ecosystems and lost to the atmosphere. Stable carbon isotope studies can give novel insights into these issues. In this review we provide an overview of an emerging picture of plant-soil-atmosphere C fluxes, as based on C isotope studies, and identify processes determining related C isotope signatures. The first part of the review focuses on isotopic fractionation processes within plants during and after photosynthesis. The second major part elaborates on plant-internal and plant-rhizosphere C allocation patterns at different time scales (diel, seasonal, interannual), including the speed of C transfer and time lags in the coupling of assimilation and respiration, as well as the magnitude and controls of plant-soil C allocation and respiratory fluxes. Plant responses to changing environmental conditions, the functional relationship between the physiological and phenological status of plants and C transfer, and interactions between C, water and nutrient dynamics are discussed. The role of the C counterflow from the rhizosphere to the aboveground parts of the plants, e.g. via CO2 dissolved in the xylem water or as xylem-transported sugars, is highlighted. The third part is centered around belowground C turnover, focusing especially on above- and belowground litter inputs, soil organic matter formation and turnover, production and loss of dissolved organic C, soil respiration and CO2 fixation by soil microbes. Furthermore, plant controls on microbial communities and activity via exudates and litter production as well as microbial community effects on C mineralization are reviewed. A further part of the paper is dedicated to physical interactions between soil CO2 and the soil matrix, such as CO2 diffusion and dissolution processes within the soil profile. Finally, we highlight state-of-the-art stable isotope methodologies and their latest developments. From the presented evidence we conclude that there exists a tight coupling of physical, chemical and biological processes involved in C cycling and C isotope fluxes in the plant-soil-atmosphere system. Generally, research using information from C isotopes allows an integrated view of the different processes involved. However, complex interactions among the range of processes complicate or currently impede the interpretation of isotopic signals in CO2 or organic compounds at the plant and ecosystem level. This review tries to identify present knowledge gaps in correctly interpreting carbon stable isotope signals in the plant-soil-atmosphere system and how future research approaches could contribute to closing these gaps.

Land-Climate Feedbacks in Indian Summer Monsoon Rainfall

NASA Astrophysics Data System (ADS)

Asharaf, Shakeel; Ahrens, Bodo

2016-04-01

In an attempt to identify how land surface states such as soil moisture influence the monsoonal precipitation climate over India, a series of numerical simulations including soil moisture sensitivity experiments was performed. The simulations were conducted with a nonhydrostatic regional climate model (RCM), the Consortium for Small-Scale Modeling (COSMO) in climate mode (CCLM) model, which was driven by the European Center for Medium-Range Weather Forecasts (ECMWF) Interim reanalysis (ERA-Interim) data. Results showed that pre-monsoonal soil moisture has a significant impact on monsoonal precipitation formation and large-scale atmospheric circulations. The analysis revealed that even a small change in the processes that influence precipitation via changes in local evapotranspiration was able to trigger significant variations in regional soil moisture-precipitation feedback. It was observed that these processes varied spatially from humid to arid regions in India, which further motivated an examination of soil-moisture memory variation over these regions and determination of the ISM seasonal forecasting potential. A quantitative analysis indicated that the simulated soil-moisture memory lengths increased with soil depth and were longer in the western region than those in the eastern region of India. Additionally, the subsequent precipitation variance explained by soil moisture increased from east to west. The ISM rainfall was further analyzed in two different greenhouse gas emission scenarios: the Special Report on Emissions Scenario (SRES: B1) and the new Representative Concentration Pathways (RCPs: RCP4.5). To that end, the CCLM and its driving global-coupled atmospheric-oceanic model (GCM), ECHAM/MPIOM were used in order to understand the driving processes of the projected inter-annual precipitation variability and associated trends. Results inferred that the projected rainfall changes were the result of two largely compensating processes: increase of remotely induced precipitation and decrease of precipitation efficiency. However, the complementing precipitation components and their simulation uncertainties rendered climate projections of the Indian summer monsoon rainfall as an ongoing, highly ambiguous challenge for both the GCM and the RCM.

Microbial hotspots and hot moments in soil

NASA Astrophysics Data System (ADS)

Kuzyakov, Yakov; Blagodatskaya, Evgenia

2015-04-01

Soils are the most heterogeneous parts of the biosphere, with an extremely high differentiation of properties and processes within nano- to macroscales. The spatial and temporal heterogeneity of input of labile organics by plants creates microbial hotspots over short periods of time - the hot moments. We define microbial hotspots as small soil volumes with much faster process rates and much more intensive interactions compared to the average soil conditions. Such hotspots are found in the rhizosphere, detritusphere, biopores (including drilosphere) and on aggregate surfaces, but hotspots are frequently of mixed origin. Hot moments are short-term events or sequences of events inducing accelerated process rates as compared to the averaged rates. Thus, hotspots and hot moments are defined by dynamic characteristics, i.e. by process rates. For this hotspot concept we extensively reviewed and examined the localization and size of hotspots, spatial distribution and visualization approaches, transport of labile C to and from hotspots, lifetime and process intensities, with a special focus on process rates and microbial activities. The fraction of active microorganisms in hotspots is 2-20 times higher than in the bulk soil, and their specific activities (i.e. respiration, microbial growth, mineralization potential, enzyme activities, RNA/DNA ratio) may also be much higher. The duration of hot moments in the rhizosphere is limited and is controlled by the length of the input of labile organics. It can last a few hours up to a few days. In the detritusphere, however, the duration of hot moments is regulated by the output - by decomposition rates of litter - and lasts for weeks and months. Hot moments induce succession in microbial communities and intense intra- and interspecific competition affecting C use efficiency, microbial growth and turnover. The faster turnover and lower C use efficiency in hotspots counterbalances the high C inputs, leading to the absence of strong increases in C stocks. Consequently, the intensification of fluxes is much stronger than the increase of pools. Maintenance of stoichiometric ratios by accelerated microbial growth in hotspots requires additional nutrients (e.g. N and P), causing their microbial mining from soil organic matter, i.e. priming effects. Consequently, priming effects are localized in microbial hotspots and are consequences of hot moments. Finally, we estimated the contribution of the hotspots to the whole soil profile and suggested that, irrespective of their volume, the hotspots are mainly responsible for the ecologically relevant processes in soil.

Transfer of the nationwide Czech soil survey data to a foreign soil classification - generating input parameters for a process-based soil erosion modelling approach

NASA Astrophysics Data System (ADS)

Beitlerová, Hana; Hieke, Falk; Žížala, Daniel; Kapička, Jiří; Keiser, Andreas; Schmidt, Jürgen; Schindewolf, Marcus

2017-04-01

Process-based erosion modelling is a developing and adequate tool to assess, simulate and understand the complex mechanisms of soil loss due to surface runoff. While the current state of available models includes powerful approaches, a major drawback is given by complex parametrization. A major input parameter for the physically based soil loss and deposition model EROSION 3D is represented by soil texture. However, as the model has been developed in Germany it is dependent on the German soil classification. To exploit data generated during a massive nationwide soil survey campaign taking place in the 1960s across the entire Czech Republic, a transfer from the Czech to the German or at least international (e.g. WRB) system is mandatory. During the survey the internal differentiation of grain sizes was realized in a two fractions approach, separating texture into solely above and below 0.01 mm rather than into clayey, silty and sandy textures. Consequently, the Czech system applies a classification of seven different textures based on the respective percentage of large and small particles, while in Germany 31 groups are essential. The followed approach of matching Czech soil survey data to the German system focusses on semi-logarithmic interpolation of the cumulative soil texture curve additionally on a regression equation based on a recent database of 128 soil pits. Furthermore, for each of the seven Czech texture classes a group of typically suitable classes of the German system was derived. A GIS-based spatial analysis to test approaches of interpolation the soil texture was carried out. First results show promising matches and pave the way to a Czech model application of EROSION 3D.

Process based modelling of soil organic carbon redistribution on landscape scale

NASA Astrophysics Data System (ADS)

Schindewolf, Marcus; Seher, Wiebke; Amorim, Amorim S. S.; Maeso, Daniel L.; Jürgen, Schmidt

2014-05-01

Recent studies have pointed out the great importance of erosion processes in global carbon cycling. Continuous erosion leads to a massive loss of top soils including the loss of organic carbon accumulated over long time in the soil humus fraction. Lal (2003) estimates that 20% of the organic carbon eroded with top soils is emitted into atmosphere, due to aggregate breakdown and carbon mineralization during transport by surface runoff. Furthermore soil erosion causes a progressive decrease of natural soil fertility, since cation exchange capacity is associated with organic colloids. As a consequence the ability of soils to accumulate organic carbon is reduced proportionately to the drop in soil productivity. The colluvial organic carbon might be protected from further degradation depending on the depth of the colluvial cover and local decomposing conditions. Some colluvial sites can act as long-term sinks for organic carbon. The erosional transport of organic carbon may have an effect on the global carbon budget, however, it is uncertain, whether erosion is a sink or a source for carbon in the atmosphere. Another part of eroded soils and organic carbon will enter surface water bodies and might be transported over long distances. These sediments might be deposited in the riparian zones of river networks. Erosional losses of organic carbon will not pass over into atmosphere for the most part. But soil erosion limits substantially the potential of soils to sequester atmospheric CO2 by generating humus. The present study refers to lateral carbon flux modelling on landscape scale using the process based EROSION 3D soil loss simulation model, using existing parameter values. The selective nature of soil erosion results in a preferentially transport of fine particles while less carbonic larger particles remain on site. Consequently organic carbon is enriched in the eroded sediment compared to the origin soil. For this reason it is essential that EROSION 3D provides the grain size distribution (clay, silt and sand) of the transported sediment. A test slope is modeled covering certain land use and soil management scenarios referring to different rainfall events. Results allow first insights on carbon loss and depletion on sediment delivery areas as well as carbon gains and enrichments on deposition areas on landscape scale. Lal, R. (2003). Soil erosion and the global carbon budget. Environment International vol. 29: 437-450.

Testing the capability of ORCHIDEE land surface model to simulate Arctic ecosystems: Sensitivity analysis and site-level model calibration

NASA Astrophysics Data System (ADS)

Dantec-Nédélec, S.; Ottlé, C.; Wang, T.; Guglielmo, F.; Maignan, F.; Delbart, N.; Valdayskikh, V.; Radchenko, T.; Nekrasova, O.; Zakharov, V.; Jouzel, J.

2017-06-01

The ORCHIDEE land surface model has recently been updated to improve the representation of high-latitude environments. The model now includes improved soil thermodynamics and the representation of permafrost physical processes (soil thawing and freezing), as well as a new snow model to improve the representation of the seasonal evolution of the snow pack and the resulting insulation effects. The model was evaluated against data from the experimental sites of the WSibIso-Megagrant project (www.wsibiso.ru). ORCHIDEE was applied in stand-alone mode, on two experimental sites located in the Yamal Peninsula in the northwestern part of Siberia. These sites are representative of circumpolar-Arctic tundra environments and differ by their respective fractions of shrub/tree cover and soil type. After performing a global sensitivity analysis to identify those parameters that have most influence on the simulation of energy and water transfers, the model was calibrated at local scale and evaluated against in situ measurements (vertical profiles of soil temperature and moisture, as well as active layer thickness) acquired during summer 2012. The results show how sensitivity analysis can identify the dominant processes and thereby reduce the parameter space for the calibration process. We also discuss the model performance at simulating the soil temperature and water content (i.e., energy and water transfers in the soil-vegetation-atmosphere continuum) and the contribution of the vertical discretization of the hydrothermal properties. This work clearly shows, at least at the two sites used for validation, that the new ORCHIDEE vertical discretization can represent the water and heat transfers through complex cryogenic Arctic soils—soils which present multiple horizons sometimes with peat inclusions. The improved model allows us to prescribe the vertical heterogeneity of the soil hydrothermal properties.

Weathering profiles in soils and rocks on Earth and Mars

NASA Astrophysics Data System (ADS)

Hausrath, E.; Adcock, C. T.; Bamisile, T.; Baumeister, J. L.; Gainey, S.; Ralston, S. J.; Steiner, M.; Tu, V.

2017-12-01

Interactions of liquid water with rock, soil, or sediments can result in significant chemical and mineralogical changes with depth. These changes can include transformation from one phase to another as well as translocation, addition, and loss of material. The resulting chemical and mineralogical depth profiles can record characteristics of the interacting liquid water such as pH, temperature, duration, and abundance. We use a combined field, laboratory, and modeling approach to interpret the environmental conditions preserved in soils and rocks. We study depth profiles in terrestrial field environments; perform dissolution experiments of primary and secondary phases important in soil environments; and perform numerical modeling to quantitatively interpret weathering environments. In our field studies we have measured time-integrated basaltic mineral dissolution rates, and interpreted the impact of pH and temperature on weathering in basaltic and serpentine-containing rocks and soils. These results help us interpret fundamental processes occurring in soils on Earth and on Mars, and can also be used to inform numerical modeling and laboratory experiments. Our laboratory experiments provide fundamental kinetic data to interpret processes occurring in soils. We have measured dissolution rates of Mars-relevant phosphate minerals, clay minerals, and amorphous phases, as well as dissolution rates under specific Mars-relevant conditions such as in concentrated brines. Finally, reactive transport modeling allows a quantitative interpretation of the kinetic, thermodynamic, and transport processes occurring in soil environments. Such modeling allows the testing of conditions under longer time frames and under different conditions than might be possible under either terrestrial field or laboratory conditions. We have used modeling to examine the weathering of basalt, olivine, carbonate, phosphate, and clay minerals, and placed constraints on the duration, pH, and solution chemistry of past aqueous alteration occurring on Mars.

Challenges in Developing Models Describing Complex Soil Systems

NASA Astrophysics Data System (ADS)

Simunek, J.; Jacques, D.

2014-12-01

Quantitative mechanistic models that consider basic physical, mechanical, chemical, and biological processes have the potential to be powerful tools to integrate our understanding of complex soil systems, and the soil science community has often called for models that would include a large number of these diverse processes. However, once attempts have been made to develop such models, the response from the community has not always been overwhelming, especially after it discovered that these models are consequently highly complex, requiring not only a large number of parameters, not all of which can be easily (or at all) measured and/or identified, and which are often associated with large uncertainties, but also requiring from their users deep knowledge of all/most of these implemented physical, mechanical, chemical and biological processes. Real, or perceived, complexity of these models then discourages users from using them even for relatively simple applications, for which they would be perfectly adequate. Due to the nonlinear nature and chemical/biological complexity of the soil systems, it is also virtually impossible to verify these types of models analytically, raising doubts about their applicability. Code inter-comparisons, which is then likely the most suitable method to assess code capabilities and model performance, requires existence of multiple models of similar/overlapping capabilities, which may not always exist. It is thus a challenge not only to developed models describing complex soil systems, but also to persuade the soil science community in using them. As a result, complex quantitative mechanistic models are still an underutilized tool in soil science research. We will demonstrate some of the challenges discussed above on our own efforts in developing quantitative mechanistic models (such as HP1/2) for complex soil systems.

The properties and evolution of artificial soil-like bodies in the urban environment

NASA Astrophysics Data System (ADS)

Ivannikov, Fedor; Prokofieva, Tatiana

2010-05-01

Technogenic sediments as well as urban brownfields make to 90 % from the area of territory of Moscow. Today, in Moscow soil remediation and reclamation occurs by designing and constructing of lawns. Both naked sediments and mature city soils - urbanozems (according prof. M.Stroganova, Urbic Thechnosol - according WRB), are exposing by this reclamation. The reclaiming soil-like bodies named tehnozems (Technosols?). After their creation, tehnozems begin to operate under natural soil processes. This, in our opinion, can be considered the zero-moment for city soil formation The purpose of our research was to reveal the basic trend in technozems transformations, and also to understand the effectiveness of reclamation through construction on various tehnozem bases. In our research we examine sites within the city boundaries on various elements of a relief with various ages and different histories of nature management. The most typical objects of research - different varieties of city soils and soil-like bodies - have been allocated on these sites. With these objects we perform a set of physical, chemical and biological analyses. The following characteristics were identified: pH(H2O), organic carbon, soluble potassium, available phosphorus, total content of heavy metals (Zn, Cu, Cd, Pb), Red-Ox potential, penetration resistance, bulk density, cellulosolytic activity, species composition of soil animals and microbiological inoculation on anitrogenous medium Then, having learned the properties of city soils and soil-like bodies, we have tried to construct a trend of anthropogenous transformation of soil-like bodies. I. Natural soils collapse under action on settlements and covered by a technogenic ground. Then it is imposed a peat compost mix on them, for reclamation this territories. II. However, recultivation is unable to occur, and weed vegetation begins growing along with the formation of underdeveloped soils (Regosols and Arenosols). Furthermore, in a soil-like body, as well as in underdeveloped soil, soil processes are progressed, for example: humification, calcalization, zooturbation, etc. Technozems are also becoming Regopsols, but humic horizon is forming in both cases in different time (from 5-6 to as many as 30 years) III. Carbonate dust, trace materials, and other products of urban activity are added to soil surface. Then all this products are included in process of soilformation. This urban depositions change soil properties. Accumulation of carbonates, heavy metals, and artifacts is taking place. As a result the special urban soil - urbanozem is forming. It grows till the certain moment while it again not reclamation with formation the technozem on urbanozem basis. .

Transport of sulfadiazine in soil columns — Experiments and modelling approaches

NASA Astrophysics Data System (ADS)

Wehrhan, Anne; Kasteel, Roy; Simunek, Jirka; Groeneweg, Joost; Vereecken, Harry

2007-01-01

Antibiotics, such as sulfadiazine, reach agricultural soils directly through manure of grazing livestock or indirectly through the spreading of manure or sewage sludge on the field. Knowledge about the fate of antibiotics in soils is crucial for assessing the environmental risk of these compounds, including possible transport to the groundwater. Transport of 14C-labelled sulfadiazine was investigated in disturbed soil columns at a constant flow rate of 0.26 cm h - 1 near saturation. Sulfadiazine was applied in different concentrations for either a short or a long pulse duration. Breakthrough curves of sulfadiazine and the non-reactive tracer chloride were measured. At the end of the leaching period the soil concentration profiles were determined. The peak maxima of the breakthrough curves were delayed by a factor of 2 to 5 compared to chloride and the decreasing limbs are characterized by an extended tailing. However, the maximum relative concentrations differed as well as the eluted mass fractions, ranging from 18 to 83% after 500 h of leaching. To identify relevant sorption processes, breakthrough curves of sulfadiazine were fitted with a convective-dispersive transport model, considering different sorption concepts with one, two and three sorption sites. Breakthrough curves can be fitted best with a three-site sorption model, which includes two reversible kinetic and one irreversible sorption site. However, the simulated soil concentration profiles did not match the observations for all of the used models. Despite this incomplete process description, the obtained results have implications for the transport behavior of sulfadiazine in the field. Its leaching may be enhanced if it is frequently applied at higher concentrations.

Soil microbial community composition is correlated to soil carbon processing along a boreal wetland formation gradient

USGS Publications Warehouse

Chapman, Eric; Cadillo-Quiroz, Hinsby; Childers, Daniel L.; Turetsky, Merritt R.; Waldrop, Mark P.

2017-01-01

Climate change is modifying global biogeochemical cycles. Microbial communities play an integral role in soil biogeochemical cycles; knowledge about microbial composition helps provide a mechanistic understanding of these ecosystem-level phenomena. Next generation sequencing approaches were used to investigate changes in microbial functional groups during ecosystem development, in response to climate change, in northern boreal wetlands. A gradient of wetlands that developed following permafrost degradation was used to characterize changes in the soil microbial communities that mediate C cycling: a bog representing an “undisturbed” system with intact permafrost, and a younger bog and an older bog that formed following the disturbance of permafrost thaw. Reference 16S rRNA databases and several diversity indices were used to assess structural differences among these communities, to assess relationships between soil microbial community composition and various environmental variables including redox potential and pH. Rates of potential CO2 and CH4 gas production were quantified to correlate sequence data with gas flux. The abundance of organic C degraders was highest in the youngest bog, suggesting higher rates of microbial processes, including potential CH4 production. In addition, alpha diversity was also highest in the youngest bog, which seemed to be related to a more neutral pH and a lower redox potential. These results could potentially be driven by increased niche differentiation in anaerobic soils. These results suggest that ecosystem structure, which was largely driven by changes in edaphic and plant community characteristics between the “undisturbed” permafrost bog and the two bogs formed following permafrost thaw, strongly influenced microbial function.

Evaluation of soil processing conditions on mineralizable C and N across a textural gradient

USDA-ARS?s Scientific Manuscript database

Soil biological activity is an important component of a well-functioning soil. Methodologies for estimating this process in soil vary due to a variety of theoretical, functional, and expediency considerations. We tested the effects of soil processing (sieve size), water delivery method (from top a...

Environmental fate of two sulfonamide antimicrobial agents in soil.

PubMed

Accinelli, Cesare; Koskinen, William C; Becker, Joanna M; Sadowsky, Michael J

2007-04-04

Veterinary antimicrobial agents have been detected in a number of environmental samples, including agricultural soils. In this study, we investigated the persistence and sorption of the sulfonamides sulfamethazine (SMZ) and sulfachloropyridine (SCP) in soil and their potential effects on soil microorganisms. The sulfonamides dissipated more rapidly from the silt loam soil as compared to the sandy soil. Average half-lives of SMZ and SPC among the two soils were 18.6 and 21.3 days, respectively. The presence of liquid swine slurry (5% v/w) decreased sulfonamide persistence in the silt loam soil. The lower persistence of the antimicrobials in liquid swine slurry-amended soil was likely due to higher microbial activity, as compared to unamended soil, and/or to the greater bioavailability of the sulfonamides to degrading microorganisms, as estimated by sorption isotherms. Concentrations of SMZ and SPC up to 100 microg g-1 had no effect on antimicrobial degradation rates and soil microorganisms. These studies suggest that higher sulfonamide concentrations would be necessary to affect the main processes controlling their environmental fates in soil, but at the concentrations normally found in the environment, there would be little or no effects.

Soil management practices under organic farming

NASA Astrophysics Data System (ADS)

Aly, Adel; Chami Ziad, Al; Hamdy, Atef

2015-04-01

Organic farming methods combine scientific knowledge of ecology and modern technology with traditional farming practices based on naturally occurring biological processes. Soil building practices such as crop rotations, intercropping, symbiotic associations, cover crops, organic fertilizers and minimum tillage are central to organic practices. Those practices encourage soil formation and structure and creating more stable systems. In farm nutrient and energy cycling is increased and the retentive abilities of the soil for nutrients and water are enhanced. Such management techniques also play an important role in soil erosion control. The length of time that the soil is exposed to erosive forces is decreased, soil biodiversity is increased, and nutrient losses are reduced, helping to maintain and enhance soil productivity. Organic farming as systematized and certifiable approach for agriculture, there is no surprise that it faces some challenges among both farmers and public sector. This can be clearly demonstrated particularly in the absence of the essential conditions needed to implement successfully the soil management practices like green manure and composting to improve soil fertility including crop rotation, cover cropping and reduced tillage. Those issues beside others will be fully discussed highlighting their beneficial impact on the environmental soil characteristics. Keywords: soil fertility, organic matter, plant nutrition

Fingerprinting selection for agroenvironmental catchment studies: EDXRF analysis for solving complex artificial mixtures

NASA Astrophysics Data System (ADS)

Torres Astorga, Romina; Velasco, Hugo; Dercon, Gerd; Mabit, Lionel

2017-04-01

Soil erosion and associated sediment transportation and deposition processes are key environmental problems in Central Argentinian watersheds. Several land use practices - such as intensive grazing and crop cultivation - are considered likely to increase significantly land degradation and soil/sediment erosion processes. Characterized by highly erodible soils, the sub catchment Estancia Grande (12.3 km2) located 23 km north east of San Luis has been investigated by using sediment source fingerprinting techniques to identify critical hot spots of land degradation. The authors created 4 artificial mixtures using known quantities of the most representative sediment sources of the studied catchment. The first mixture was made using four rotation crop soil sources. The second and the third mixture were created using different proportions of 4 different soil sources including soils from a feedlot, a rotation crop, a walnut forest and a grazing soil. The last tested mixture contained the same sources as the third mixture but with the addition of a fifth soil source (i.e. a native bank soil). The Energy Dispersive X Ray Fluorescence (EDXRF) analytical technique has been used to reconstruct the source sediment proportion of the original mixtures. Besides using a traditional method of fingerprint selection such as Kruskal-Wallis H-test and Discriminant Function Analysis (DFA), the authors used the actual source proportions in the mixtures and selected from the subset of tracers that passed the statistical tests specific elemental tracers that were in agreement with the expected mixture contents. The selection process ended with testing in a mixing model all possible combinations of the reduced number of tracers obtained. Alkaline earth metals especially Strontium (Sr) and Barium (Ba) were identified as the most effective fingerprints and provided a reduced Mean Absolute Error (MAE) of approximately 2% when reconstructing the 4 artificial mixtures. This study demonstrates that the EDXRF fingerprinting approach performed very well in reconstructing our original mixtures especially in identifying and quantifying the contribution of the 4 rotation crop soil sources in the first mixture.

Assembly processes under severe abiotic filtering: adaptation mechanisms of weed vegetation to the gradient of soil constraints.

PubMed

Nikolic, Nina; Böcker, Reinhard; Kostic-Kravljanac, Ljiljana; Nikolic, Miroslav

2014-01-01

Effects of soil on vegetation patterns are commonly obscured by other environmental factors; clear and general relationships are difficult to find. How would community assembly processes be affected by a substantial change in soil characteristics when all other relevant factors are held constant? In particular, can we identify some functional adaptations which would underpin such soil-induced vegetation response? Eastern Serbia: fields partially damaged by long-term and large-scale fluvial deposition of sulphidic waste from a Cu mine; subcontinental/submediterranean climate. We analysed the multivariate response of cereal weed assemblages (including biomass and foliar analyses) to a strong man-made soil gradient (from highly calcareous to highly acidic, nutrient-poor soils) over short distances (field scale). The soil gradient favoured a substitution of calcicoles by calcifuges, and an increase in abundance of pseudometallophytes, with preferences for Atlantic climate, broad geographical distribution, hemicryptophytic life form, adapted to low-nutrient and acidic soils, with lower concentrations of Ca, and very narrow range of Cu concentrations in leaves. The trends of abundance of the different ecological groups of indicator species along the soil gradient were systematically reflected in the maintenance of leaf P concentrations, and strong homeostasis in biomass N:P ratio. Using annual weed vegetation at the field scale as a fairly simple model, we demonstrated links between gradients in soil properties (pH, nutrient availability) and floristic composition that are normally encountered over large geographic distances. We showed that leaf nutrient status, in particular the maintenance of leaf P concentrations and strong homeostasis of biomass N:P ratio, underpinned a clear functional response of vegetation to mineral stress. These findings can help to understand assembly processes leading to unusual, novel combinations of species which are typically observed as a consequence of strong environmental filtering, as for instance on sites affected by industrial activities.

Changes in soil thermal regime lead to substantial shifts in carbon and energy fluxes in drained Arctic tundra

NASA Astrophysics Data System (ADS)

Goeckede, M.; Kwon, M. J.; Kittler, F.; Heimann, M.; Zimov, N.; Zimov, S. A.

2016-12-01

Climate change impacts in the Arctic will not only depend on future temperature trajectories in this region. In particular, potential shifts in hydrologic regimes, e.g. linked to altered precipitation patterns or changes in topography following permafrost degradation, can dramatically modify ecosystem feedbacks to warming. Here, we analyze how severe drainage affects both biogeochemical and biogeophysical processes within a formerly wet Arctic tundra, with a special focus on the interactions between hydrology and soil temperatures, and related effects on the fluxes of carbon and energy. Our findings are based on year-round observations from a decade-long drainage experiment conducted near Chersky, Northeast Siberia. Through our multi-disciplinary observations we can document that the drainage triggered a suite of secondary changes in ecosystem properties, including e.g. adaptation processes in the vegetation community structure, or shifts in snow cover regime. Most profoundly, a combination of low heat capacity and reduced heat conductivity in dry organic soils lead to warmer soil temperatures near the surface, while deeper soil layers remained colder. These changes in soil thermal regime reduced the contribution of deeper soil layers with older carbon pools to overall ecosystem respiration, as documented through radiocarbon signals. Regarding methane, the observed steeper temperature gradient along the vertical soil profile slowed down methane production in deep layers, while promoting CH4 oxidation near the surface. Taken together, both processes contributed to a reduction in CH4 emissions up to a factor of 20 following drainage. Concerning the energy budget, we observed an intensification of energy transfer to the lower atmosphere, particularly in form of sensible heat, but the reduced energy transfer into deeper soil layers also led to systematically shallower thaw depths. Summarizing, drainage may contribute to slow down decomposition of old carbon from deep soil layers, counterbalancing direct warming effects on permafrost carbon pools.

Assembly Processes under Severe Abiotic Filtering: Adaptation Mechanisms of Weed Vegetation to the Gradient of Soil Constraints

PubMed Central

Nikolic, Nina; Böcker, Reinhard; Kostic-Kravljanac, Ljiljana; Nikolic, Miroslav

2014-01-01

Questions Effects of soil on vegetation patterns are commonly obscured by other environmental factors; clear and general relationships are difficult to find. How would community assembly processes be affected by a substantial change in soil characteristics when all other relevant factors are held constant? In particular, can we identify some functional adaptations which would underpin such soil-induced vegetation response? Location Eastern Serbia: fields partially damaged by long-term and large-scale fluvial deposition of sulphidic waste from a Cu mine; subcontinental/submediterranean climate. Methods We analysed the multivariate response of cereal weed assemblages (including biomass and foliar analyses) to a strong man-made soil gradient (from highly calcareous to highly acidic, nutrient-poor soils) over short distances (field scale). Results The soil gradient favoured a substitution of calcicoles by calcifuges, and an increase in abundance of pseudometallophytes, with preferences for Atlantic climate, broad geographical distribution, hemicryptophytic life form, adapted to low-nutrient and acidic soils, with lower concentrations of Ca, and very narrow range of Cu concentrations in leaves. The trends of abundance of the different ecological groups of indicator species along the soil gradient were systematically reflected in the maintenance of leaf P concentrations, and strong homeostasis in biomass N:P ratio. Conclusion Using annual weed vegetation at the field scale as a fairly simple model, we demonstrated links between gradients in soil properties (pH, nutrient availability) and floristic composition that are normally encountered over large geographic distances. We showed that leaf nutrient status, in particular the maintenance of leaf P concentrations and strong homeostasis of biomass N:P ratio, underpinned a clear functional response of vegetation to mineral stress. These findings can help to understand assembly processes leading to unusual, novel combinations of species which are typically observed as a consequence of strong environmental filtering, as for instance on sites affected by industrial activities. PMID:25474688

Soil and plant factors influencing the accumulation of heavy metals by plants.

PubMed Central

Cataldo, D A; Wildung, R E

1978-01-01

The use of plants to monitor heavy metal pollution in the terrestrial environment must be based on a cognizance of the complicated, integrated effects of pollutant source and soil-plant variables. To be detectable in plants, pollutant sources must significantly increase the plant available metal concentration in soil. The major factor governing metal availability to plants in soils is the solubility of the metal associated with the solid phase, since in order for root uptake to occur, a soluble species must exist adjacent to the root membrane for some finite period. The rate of release and form of this soluble species will have a strong influence on the rate and extent of uptake and, perhaps, mobility and toxicity in the plant and consuming animals. The factors influencing solubility and form of available metal species in soil vary widely geographically and include the concentration and chemical form of the element entering soil, soil properties (endogenous metal concentration, mineralogy, particle size distribution), and soil processes (e.g., mineral weathering, microbial activity), as these influence the kinetics of sorption reactions, metal concentration in solution and the form of soluble and insoluble chemical species. The plant root represents the first barrier to the selective accumulation of ions present in soil solution. Uptake and kinetic data for nutrient ions and chemically related nonnutrient analogs suggest that metabolic processes associated with root absorption of nutrients regulate both the affinity and rate of absorption of specific nonnutrient ions. Detailed kinetic studies of Ni, Cd, and Tl uptake by intact plants demonstrate multiphasic root absorption processes over a broad concentration range, and the use of transport mechanisms in place for the nutrient ions Cu, Zn, and K. Advantages and limitations of higher plants as indicators of increased levels of metal pollution are discussed in terms of these soil and plant phenomena. PMID:367766

Bringing life to soil physical processes

NASA Astrophysics Data System (ADS)

Hallett, P. D.

2013-12-01

When Oklahoma's native prairie grass roots were replaced by corn, the greatest environmental (and social) disaster ever to hit America ensued. The soils lost structure, physical binding by roots was annihilated and when drought came the Great Dust Bowl commenced. This form of environmental disaster has repeated over history and although not always apparent, similar processes drive the degradation of seemingly productive farmland and forests. But just as negative impacts on biology are deleterious to soil physical properties, positive impacts could reverse these trends. In finding solutions to soil sustainability and food security, we should be able to exploit biological processes to improve soil physical properties. This talk will focus on a quantitative understanding of how biology changes soil physical behaviour. Like the Great Dust Bowl, it starts with reinforcement mechanisms by plant roots. We found that binding of soil by cereal (barley) roots within 5 weeks of planting can more than double soil shear strength, with greater plant density causing greater reinforcement. With time, however, the relative impact of root reinforcement diminishes due to root turnover and aging of the seedbed. From mechanical tests of individual roots, reasonable predictions of reinforcement by tree roots are possible with fibre bundle models. With herbaceous plants like cereals, however, the same parameters (root strength, stiffness, size and distribution) result in a poor prediction. We found that root type, root age and abiotic factors such as compaction and waterlogging affect mechanical behaviour, further complicating the understanding and prediction of root reinforcement. For soil physical stability, the interface between root and soil is an extremely important zone in terms of resistance of roots to pull-out and rhizosphere formation. Compounds analogous to root exudates have been found with rheological tests to initially decrease the shear stress where wet soils flow, but after decomposition of these exudates by microbes the shear stress increases. This suggests an initial dispersion, followed by aggregation of the soil, which explains the structural arrangement of soil particles in the rhizosphere observed by microscopy. Dispersion of soil minerals in the root zone is important to release bound nutrients from mineral surfaces. Using fracture mechanics we measured large impacts of biological exudates on the toughness and interparticle bond energy of soils. Now novel tests are being developed to quantify interparticle bonding by biological exudates on single and multiple particle contacts, including mechanical test specimens that can be inoculated with specific bacteria or fungi. This will allow for clay mineralogy, water potential and solution chemistry impacts on interparticle bonding to be quantified directly. Wettability experiments with the same samples measure hydrological properties such as contact angle. Basic information from these tests will help explain biological processes that drive soil structure formation and stabilisation, providing data for models of soil structure dynamics.

Novel sorbents for environmental remediation

NASA Astrophysics Data System (ADS)

Manariotis, Ioannis D.; Karapanagioti, Hrissi K.; Werner, David

2014-05-01

Nowadays, one of the major environmental problems is the pollution of aquatic systems and soil by persistent pollutants. Persistent pollutants have been found widespread in sediments, surface waters, and drinking water supplies. The removal of pollutants can be accomplished prior to their discharge to receiving bodies or by immobilizing them onto soil. Sorption is the most commonly applied process, and activated carbons have been widely used. Rapid progress in nanotechnology and a new focus on biomass-based instead of non-renewable starting materials have produced a wide range of novel engineered sorbents including biosorbents, biochars, carbon-based nanoparticles, bio-nano hybrid materials, and iron-impregnated activated carbons. Sorbent materials have been used in environmental remediation processes and especially in agricultural soil, sediments and contaminated soil, water treatment, and industrial wastewater treatment. Furthermore, sorbents may enhance the synergistic action of other processes, such as volatilization and biodegradation. Novel sorbents have been employed for the removal or immobilization of persistent pollutants such as and include heavy metals (As, Cr, Cu, Pb, Cd, and Hg), halogenated organic compounds, endocrine disrupting chemicals, metalloids and non-metallic elements, and other organic pollutants. The development and evaluation of novel sorbents requires a multidisciplinary approach encompassing environmental, nanotechnology, physical, analytical, and surface chemistry. The necessary evaluations encompass not only the efficiency of these materials to remove pollutants from surface waters and groundwater, industrial wastewater, polluted soils and sediments, etc., but also the potential side-effects of their environmental applications. The aim of this work is to present the results of the use of biochar and impregnated carbon sorbents for the removal of organic pollutants and metals. Furthermore, the new findings from the forthcoming session on Novel sorbents for environmental remediation, will also be evaluated and presented.

Lunar Sulfur Capture System

NASA Technical Reports Server (NTRS)

Berggren, Mark; Zubrin, Robert; Bostwick-White, Emily

2013-01-01

The Lunar Sulfur Capture System (LSCS) protects in situ resource utilization (ISRU) hardware from corrosion, and reduces contaminant levels in water condensed for electrolysis. The LSCS uses a lunar soil sorbent to trap over 98 percent of sulfur gases and about two-thirds of halide gases evolved during hydrogen reduction of lunar soils. LSCS soil sorbent is based on lunar minerals containing iron and calcium compounds that trap sulfur and halide gas contaminants in a fixed-bed reactor held at temperatures between 250 and 400 C, allowing moisture produced during reduction to pass through in vapor phase. Small amounts of Earth-based polishing sorbents consisting of zinc oxide and sodium aluminate are used to reduce contaminant concentrations to one ppm or less. The preferred LSCS configuration employs lunar soil beneficiation to boost concentrations of reactive sorbent minerals. Lunar soils contain sulfur in concentrations of about 0.1 percent, and halogen compounds including chlorine and fluorine in concentrations of about 0.01 percent. These contaminants are released as gases such as H2S, COS, CS2,HCl, and HF during thermal ISRU processing with hydrogen or other reducing gases. Removal of contaminant gases is required during ISRU processing to prevent hardware corrosion, electrolyzer damage, and catalyst poisoning. The use of Earth-supplied, single-use consumables to entirely remove contaminants at the levels existing in lunar soils would make many ISRU processes unattractive due to the large mass of consumables relative to the mass of oxygen produced. The LSCS concept of using a primary sorbent prepared from lunar soil was identified as a method by which the majority of contaminants could be removed from process gas streams, thereby substantially reducing the required mass of Earth-supplied consumables. The LSCS takes advantage of minerals containing iron and calcium compounds that are present in lunar soil to trap sulfur and halide gases in a fixedbed reactor downstream of an in-ISRU process such as hydrogen reduction. The lunar-soil-sorbent trap is held at a temperature significantly lower than the operating temperature of the hydrogen reduction or other ISRU process in order to maximize capture of contaminants, but is held at a high enough temperature to allow moisture to pass through without condensing. The lunar soil benefits from physical beneficiation to remove ultrafine particles (to reduce pressure drop through a fixed bed reactor) and to upgrade concentrations of iron and/or calcium compounds (to improve reactivity with gaseous contaminants).

Moss Mediates the Influence of Shrub Species on Soil Properties and Processes in Alpine Tundra.

PubMed

Bueno, C Guillermo; Williamson, Scott N; Barrio, Isabel C; Helgadóttir, Ágústa; HiK, David S

2016-01-01

In tundra ecosystems, bryophytes influence soil processes directly and indirectly through interactions with overstory shrub species. We experimentally manipulated moss cover and measured seasonal soil properties and processes under two species of deciduous shrubs with contrasting canopy structures, Salix planifolia pulchra and Betula glandulosa-nana complex. Soil properties (seasonal temperature, moisture and C:N ratios) and processes (seasonal litter decomposition and soil respiration) were measured over twelve months. Shrub species identity had the largest influence on summer soil temperatures and soil respiration rates, which were higher under Salix canopies. Mosses were associated with lower soil moisture irrespective of shrub identity, but modulated the effects of shrubs on winter soil temperatures and soil C:N ratios so that moss cover reduced differences in soil winter temperatures between shrub species and reduced C:N ratios under Betula but not under Salix canopies. Our results suggest a central role of mosses in mediating soil properties and processes, with their influence depending on shrub species identity. Such species-dependent effects need to be accounted for when forecasting vegetation dynamics under ongoing environmental changes.

Moss Mediates the Influence of Shrub Species on Soil Properties and Processes in Alpine Tundra

PubMed Central

Williamson, Scott N.; Barrio, Isabel C.; Helgadóttir, Ágústa; HiK, David S.

2016-01-01

In tundra ecosystems, bryophytes influence soil processes directly and indirectly through interactions with overstory shrub species. We experimentally manipulated moss cover and measured seasonal soil properties and processes under two species of deciduous shrubs with contrasting canopy structures, Salix planifolia pulchra and Betula glandulosa-nana complex. Soil properties (seasonal temperature, moisture and C:N ratios) and processes (seasonal litter decomposition and soil respiration) were measured over twelve months. Shrub species identity had the largest influence on summer soil temperatures and soil respiration rates, which were higher under Salix canopies. Mosses were associated with lower soil moisture irrespective of shrub identity, but modulated the effects of shrubs on winter soil temperatures and soil C:N ratios so that moss cover reduced differences in soil winter temperatures between shrub species and reduced C:N ratios under Betula but not under Salix canopies. Our results suggest a central role of mosses in mediating soil properties and processes, with their influence depending on shrub species identity. Such species-dependent effects need to be accounted for when forecasting vegetation dynamics under ongoing environmental changes. PMID:27760156

Occurrence and importance of anaerobic ammonium-oxidising bacteria in vegetable soils.

PubMed

Shen, Li-dong; Wu, Hong-sheng; Gao, Zhi-qiu; Xu, Xiang-hua; Chen, Tie-xi; Liu, Shuai; Cheng, Hai-xiang

2015-07-01

The quantitative importance of anaerobic ammonium oxidation (anammox) has been described in paddy fields, while the presence and importance of anammox in subsurface soil from vegetable fields have not been determined yet. Here, we investigated the occurrence and activity of anammox bacteria in five different types of vegetable fields located in Jiangsu Province, China. Stable isotope experiments confirmed the anammox activity in the examined soils, with the potential rates of 2.1 and 23.2 nmol N2 g(-1) dry soil day(-1), and the anammox accounted for 5.9-20.5% of total soil dinitrogen gas production. It is estimated that a total loss of 7.1-78.2 g N m(-2) year(-1) could be linked to the anammox process in the examined vegetable fields. Phylogenetic analyses showed that multiple co-occurring anammox genera were present in the examined soils, including Candidatus Brocadia, Candidatus Kuenenia, Candidatus Anammoxoglobus and Candidatus Jettenia, and Candidatus Brocadia appeared to be the most common anammox genus. Quantitative PCR further confirmed the presence of anammox bacteria in the examined soils, with the abundance varying from 2.8 × 10(5) to 3.0 × 10(6) copies g(-1) dry soil. Correlation analyses suggested that the soil ammonium concentration had significant influence on the activity and abundance of anammox bacteria in the examined soils. The results of our study showed the presence of diverse anammox bacteria and indicated that the anammox process could serve as an important nitrogen loss pathway in vegetable fields.

Permafrost carbon-climate feedbacks accelerate global warming.

PubMed

Koven, Charles D; Ringeval, Bruno; Friedlingstein, Pierre; Ciais, Philippe; Cadule, Patricia; Khvorostyanov, Dmitry; Krinner, Gerhard; Tarnocai, Charles

2011-09-06

Permafrost soils contain enormous amounts of organic carbon, which could act as a positive feedback to global climate change due to enhanced respiration rates with warming. We have used a terrestrial ecosystem model that includes permafrost carbon dynamics, inhibition of respiration in frozen soil layers, vertical mixing of soil carbon from surface to permafrost layers, and CH(4) emissions from flooded areas, and which better matches new circumpolar inventories of soil carbon stocks, to explore the potential for carbon-climate feedbacks at high latitudes. Contrary to model results for the Intergovernmental Panel on Climate Change Fourth Assessment Report (IPCC AR4), when permafrost processes are included, terrestrial ecosystems north of 60°N could shift from being a sink to a source of CO(2) by the end of the 21st century when forced by a Special Report on Emissions Scenarios (SRES) A2 climate change scenario. Between 1860 and 2100, the model response to combined CO(2) fertilization and climate change changes from a sink of 68 Pg to a 27 + -7 Pg sink to 4 + -18 Pg source, depending on the processes and parameter values used. The integrated change in carbon due to climate change shifts from near zero, which is within the range of previous model estimates, to a climate-induced loss of carbon by ecosystems in the range of 25 + -3 to 85 + -16 Pg C, depending on processes included in the model, with a best estimate of a 62 + -7 Pg C loss. Methane emissions from high-latitude regions are calculated to increase from 34 Tg CH(4)/y to 41-70 Tg CH(4)/y, with increases due to CO(2) fertilization, permafrost thaw, and warming-induced increased CH(4) flux densities partially offset by a reduction in wetland extent.

The effect of fire on soil organic matter--a review.

PubMed

González-Pérez, José A; González-Vila, Francisco J; Almendros, Gonzalo; Knicker, Heike

2004-08-01

The extent of the soil organic carbon pool doubles that present in the atmosphere and is about two to three times greater than that accumulated in living organisms in all Earth's terrestrial ecosystems. In such a scenario, one of the several ecological and environmental impacts of fires is that biomass burning is a significant source of greenhouse gases responsible for global warming. Nevertheless, the oxidation of biomass is usually incomplete and a range of pyrolysis compounds and particulate organic matter (OM) in aerosols are produced simultaneously to the thermal modification of pre-existing C forms in soil. These changes lead to the evolution of the OM to "pyromorphic humus", composed by rearranged macromolecular substances of weak colloidal properties and an enhanced resistance against chemical and biological degradation. Hence the occurrence of fires in both undisturbed and agricultural ecosystems may produce long-lasting effects on soils' OM composition and dynamics. Due to the large extent of the C pool in soils, small deviations in the different C forms may also have a significant effect in the global C balance and consequently on climate change. This paper reviews the effect of forest fires on the quantity and quality of soils' OM. It is focused mainly on the most stable pool of soil C; i.e., that having a large residence time, composed of free lipids, colloidal fractions, including humic acids (HA) and fulvic acids (FA), and other resilient forms. The main transformations exerted by fire on soil humus include the accumulation of new particulate C forms highly resistant to oxidation and biological degradation including the so-called "black carbon" (BC). Controversial environmental implications of such processes, specifically in the stabilisation of C in soil and their bearing on the global C cycle are discussed.

Constraining soil C cycling with strategic, adaptive action for data and model reporting

NASA Astrophysics Data System (ADS)

Harden, J. W.; Swanston, C.; Hugelius, G.

2015-12-01

Regional to global carbon assessments include a variety of models, data sets, and conceptual structures. This includes strategies for representing the role and capacity of soils to sequester, release, and store carbon. Traditionally, many soil carbon data sets emerged from agricultural missions focused on mapping and classifying soils to enhance and protect production of food and fiber. More recently, soil carbon assessments have allowed for more strategic measurement to address the functional and spatially explicit role that soils play in land-atmosphere carbon exchange. While soil data sets are increasingly inter-comparable and increasingly sampled to accommodate global assessments, soils remain poorly constrained or understood with regard to their role in spatio-temporal variations in carbon exchange. A more deliberate approach to rapid improvement in our understanding involves a community-based activity than embraces both a nimble data repository and a dynamic structure for prioritization. Data input and output can be transparent and retrievable as data-derived products, while also being subjected to rigorous queries for merging and harmonization into a searchable, comprehensive, transparent database. Meanwhile, adaptive action groups can prioritize data and modeling needs that emerge through workshops, meta-data analyses or model testing. Our continual renewal of priorities should address soil processes, mechanisms, and feedbacks that significantly influence global C budgets and/or significantly impact the needs and services of regional soil resources that are impacted by C management. In order to refine the International Soil Carbon Network, we welcome suggestions for such groups to be led on topics such as but not limited to manipulation experiments, extreme climate events, post-disaster C management, past climate-soil interactions, or water-soil-carbon linkages. We also welcome ideas for a business model that can foster and promote idea and data sharing.

Mercury recovery using a fluidized bed

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harriss, C.; Baum, D.L. Jr.

1996-12-31

Philip Environmental Services Corporation`s (Philip`s) innovative fluidized bed thermal desorption system recovers mercury from contaminated soil. Referred to as the Thermal Recycling System, Philip has constructed a mobile thermal desorption system that has a processing rate up to five tons per hour. The system includes a continuous-feed system, all radiant heat, inert gas atmosphere, hot gas filter, two-stage cooling, and a water treatment system. Based on treatability studies, the processed soil can meet cleanup objectives as low as two milligrams per kilogram and passes the mercury toxicity characteristic leaching procedure test. 4 refs., 2 figs., 1 tab.

Mars 2001 Lander Mission: Measurement Synergy Through Coordinated Operations Planning And Implementation

NASA Astrophysics Data System (ADS)

Arvidson, R.; Bell, J. F., III; Kaplan, D.; Marshall, J.; Mishkin, A.; Saunders, S.; Smith, P.; Squyres, S.

1999-09-01

The 2001 Mars Surveyor Program Mission includes an orbiter with a gamma ray spectrometer and a multispectral thermal imager, and a lander with an extensive set of instrumentation, a robotic arm, and the Marie Curie Rover. The Mars 2001 Science Operations Working Group (SOWG) is a subgroup of the Project Science Group that has been formed to provide coordinated planning and implementation of scientific observations, particularly for the landed portion of the mission. The SOWG will be responsible for delivery of a science plan and, during operations, generation and delivery of conflict-free sequences. This group will also develop an archive plan that is compliant with Planetary Data System (PDS) standards, and will oversee generation, validation, and delivery of integrated archives to the PDS. In this report we cover one element of the SOWG planning activities, the development of a plan that maximizes the scientific return from lander-based observations by treating the instrument packages as an integrated payload. Scientific objectives for the lander mission have been defined. They include observations focused on determining the bedrock geology of the site through analyses of rocks and also local materials found in the soils, and the surficial geology of the site, including windblown deposits and the nature and history of formation of indurated sediments such as duricrust. Of particular interest is the identification and quantification of processes related to early warm, wet conditions and the presence of hydrologic or hydrothermal cycles. Determining the nature and origin of duricrust and associated salts is -very important in this regard. Specifically, did these deposits form in the vadose zone as pore water evaporated from soils or did they form by other processes, such as deposition of volcanic aerosols? Basic information needed to address these questions includes the morphology, topography, and geologic context of landforms and materials exposed at the site, together with quantitative information on material mineralogy, chemistry, and physical properties (rock textures; soil grain size and shape distributions; degree and nature of soil induration; soil magnetic properties). The calibration targets provide radiometric and mineralogical control surfaces. The magnets allow observations of magnetic phases. Patch plates are imaged to determine adhesive and abrasive properties of soils. Coordinated mission planning is crucial for optimizing the measurement synergy among the packages included on the lander. This planning has already begun through generation of multi-sol detailed operations activities. One focus has been to develop a scenario to use the arm to dig a soil trench to a depth of tens of centimeters. The activity will be monitored through use of Pancam and RAC to ensure nominal operations and to acquire data to determine subsurface physical properties (e.g., angle of repose of trench walls). Pancam and Mini-TES observations would also provide constraints on mineralogy and texture for the walls and bottom of the trench during excavation. If desired, soils excavated at depth could be deposited on the surface and Mossbauer and APXS measurements could be acquired for these materials. Soil samples from various depths would be delivered to MECA for characterization of aqueous geochemistry and physical properties of soil grains, particularly size, shape, and hardness. These physical properties would be determined by optical and atomic force microscopy. When completed, detailed information of soil properties as a function of depth would be obtained. These various data sets would constrain our understanding of whether or not there are systematic variations in soil characteristics as a function of depth. These variations might be related, for example, to evaporative moisture losses and formation of salt deposits, thereby indicating water transport processes occurred fairly recently. Many other value-added measurement scenarios are being developed. For example, characterizing the nature and dynamics of dust deposition will be done using MIP/DART to provide deposition rates, Pancam and RAC imaging of lander and rover surfaces to extrapolate these measurements to other areas, and a variety of measurements to determine if the bulk loose soil has the same characteristics as dust that accumulates during the mission. Bedrock geology of the site is primarily an APEX-focus setting, mineralogy, and texture, and APXS data to be we interest will be to determine the extent to which rock hydrothermal processes, given that APEX is the precursor 4 and 2005 rover missions. Additional information is contained in the original.

Mars 2001 Lander Mission: Measurement Synergy Through Coordinated Operations Planning And Implementation

NASA Technical Reports Server (NTRS)

Arvidson, R.; Bell, J. F., III; Kaplan, D.; Marshall, J.; Mishkin, A.; Saunders, S.; Smith, P.; Squyres, S.

1999-01-01

The 2001 Mars Surveyor Program Mission includes an orbiter with a gamma ray spectrometer and a multispectral thermal imager, and a lander with an extensive set of instrumentation, a robotic arm, and the Marie Curie Rover. The Mars 2001 Science Operations Working Group (SOWG) is a subgroup of the Project Science Group that has been formed to provide coordinated planning and implementation of scientific observations, particularly for the landed portion of the mission. The SOWG will be responsible for delivery of a science plan and, during operations, generation and delivery of conflict-free sequences. This group will also develop an archive plan that is compliant with Planetary Data System (PDS) standards, and will oversee generation, validation, and delivery of integrated archives to the PDS. In this report we cover one element of the SOWG planning activities, the development of a plan that maximizes the scientific return from lander-based observations by treating the instrument packages as an integrated payload. Scientific objectives for the lander mission have been defined. They include observations focused on determining the bedrock geology of the site through analyses of rocks and also local materials found in the soils, and the surficial geology of the site, including windblown deposits and the nature and history of formation of indurated sediments such as duricrust. Of particular interest is the identification and quantification of processes related to early warm, wet conditions and the presence of hydrologic or hydrothermal cycles. Determining the nature and origin of duricrust and associated salts is -very important in this regard. Specifically, did these deposits form in the vadose zone as pore water evaporated from soils or did they form by other processes, such as deposition of volcanic aerosols? Basic information needed to address these questions includes the morphology, topography, and geologic context of landforms and materials exposed at the site, together with quantitative information on material mineralogy, chemistry, and physical properties (rock textures; soil grain size and shape distributions; degree and nature of soil induration; soil magnetic properties). The calibration targets provide radiometric and mineralogical control surfaces. The magnets allow observations of magnetic phases. Patch plates are imaged to determine adhesive and abrasive properties of soils. Coordinated mission planning is crucial for optimizing the measurement synergy among the packages included on the lander. This planning has already begun through generation of multi-sol detailed operations activities. One focus has been to develop a scenario to use the arm to dig a soil trench to a depth of tens of centimeters. The activity will be monitored through use of Pancam and RAC to ensure nominal operations and to acquire data to determine subsurface physical properties (e.g., angle of repose of trench walls). Pancam and Mini-TES observations would also provide constraints on mineralogy and texture for the walls and bottom of the trench during excavation. If desired, soils excavated at depth could be deposited on the surface and Mossbauer and APXS measurements could be acquired for these materials. Soil samples from various depths would be delivered to MECA for characterization of aqueous geochemistry and physical properties of soil grains, particularly size, shape, and hardness. These physical properties would be determined by optical and atomic force microscopy. When completed, detailed information of soil properties as a function of depth would be obtained. These various data sets would constrain our understanding of whether or not there are systematic variations in soil characteristics as a function of depth. These variations might be related, for example, to evaporative moisture losses and formation of salt deposits, thereby indicating water transport processes occurred fairly recently. Many other value-added measurement scenarios are being developed. For example, characterizing the nature and dynamics of dust deposition will be done using MIP/DART to provide deposition rates, Pancam and RAC imaging of lander and rover surfaces to extrapolate these measurements to other areas, and a variety of measurements to determine if the bulk loose soil has the same characteristics as dust that accumulates during the mission. Bedrock geology of the site is primarily an APEX-focus setting, mineralogy, and texture, and APXS data to be we interest will be to determine the extent to which rock hydrothermal processes, given that APEX is the precursor 4 and 2005 rover missions. Additional information is contained in the original.

Degradation of chlorpyrifos in tropical rice soils.

PubMed

Das, Subhasis; Adhya, Tapan K

2015-04-01

Chlorpyrifos [O,O-diethyl O-(3,5,6-trichloro-2-pyridinol) phosphorothioate] is used worldwide as an agricultural insecticide against a broad spectrum of insect pests of economically important crops including rice, and soil application to control termites. The insecticide mostly undergoes hydrolysis to diethyl thiophosphoric acid (DETP) and 3,5,6-trichloro-2-pyridinol (TCP), and negligible amounts of other intermediate products. In a laboratory-cum-greenhouse study, chlorpyrifos, applied at a rate of 10 mg kg(-1) soil to five tropical rice soils of wide physico-chemical variability, degraded with a half-life ranging from 27.07 to 3.82 days. TCP was the major metabolite under both non-flooded and flooded conditions. Chlorpyrifos degradation had significant negative relationship with electrical conductivity (EC), cation exchange capacity (CEC), clay and sand contents of the soils under non-flooded conditions. Results indicate that degradation of chlorpyrifos was accelerated with increase in its application frequency, across the representative rice soils. Management regimes including moisture content and presence or absence of rice plants also influenced the process. Biotic factors also play an important role in the degradation of chlorpyrifos as demonstrated by its convincing degradation in mineral salts medium inoculated with non-sterile soil suspension. Copyright © 2015 Elsevier Ltd. All rights reserved.

Supporting the operational use of process based hydrological models and NASA Earth Observations for use in land management and post-fire remediation through a Rapid Response Erosion Database (RRED).

NASA Astrophysics Data System (ADS)

Miller, M. E.; Elliot, W.; Billmire, M.; Robichaud, P. R.; Banach, D. M.

2017-12-01

We have built a Rapid Response Erosion Database (RRED, http://rred.mtri.org/rred/) for the continental United States to allow land managers to access properly formatted spatial model inputs for the Water Erosion Prediction Project (WEPP). Spatially-explicit process-based models like WEPP require spatial inputs that include digital elevation models (DEMs), soil, climate and land cover. The online database delivers either a 10m or 30m USGS DEM, land cover derived from the Landfire project, and soil data derived from SSURGO and STATSGO datasets. The spatial layers are projected into UTM coordinates and pre-registered for modeling. WEPP soil parameter files are also created along with linkage files to match both spatial land cover and soils data with the appropriate WEPP parameter files. Our goal is to make process-based models more accessible by preparing spatial inputs ahead of time allowing modelers to focus on addressing scenarios of concern. The database provides comprehensive support for post-fire hydrological modeling by allowing users to upload spatial soil burn severity maps, and within moments returns spatial model inputs. Rapid response is critical following natural disasters. After moderate and high severity wildfires, flooding, erosion, and debris flows are a major threat to life, property and municipal water supplies. Mitigation measures must be rapidly implemented if they are to be effective, but they are expensive and cannot be applied everywhere. Fire, runoff, and erosion risks also are highly heterogeneous in space, creating an urgent need for rapid, spatially-explicit assessment. The database has been used to help assess and plan remediation on over a dozen wildfires in the Western US. Future plans include expanding spatial coverage, improving model input data and supporting additional models. Our goal is to facilitate the use of the best possible datasets and models to support the conservation of soil and water.

Estimating Vegetation Structure in African Savannas using High Spatial Resolution Imagery

NASA Astrophysics Data System (ADS)

Axelsson, C.; Hanan, N. P.

2016-12-01

High spatial resolution satellite imagery allows for detailed mapping of trees in savanna landscapes, including estimates of woody cover, tree densities, crown sizes, and the spatial pattern of trees. By linking these vegetation parameters to rainfall and soil properties we gain knowledge of how the local environment influences vegetation. A thorough understanding of the underlying ecosystem processes is key to assessing the future productivity and stability of these ecosystems. In this study, we have processed and analyzed hundreds of sites sampled from African savannas across a wide range of rainfall and soil conditions. The vegetation at each site is classified using unsupervised classification with manual assignment into woody, herbaceous and bare cover classes. A crown delineation method further divides the woody areas into individual tree crowns. The results show that rainfall, soil, and topography interactively influence vegetation structure. We see that both total rainfall and rainfall seasonality play important roles and that soil type influences woody cover and the sizes of tree crowns.

Characterization of biomass residues and their amendment effects on water sorption and nutrient leaching in sandy soil.

PubMed

Wang, Letian; Tong, Zhaohui; Liu, Guodong; Li, Yuncong

2014-07-01

In this study, we evaluated the efficiency of two types of biomass residues (fermentation residues from a bioethanol process, FB; brown mill residues from a papermaking process, BM) as amendments for a sandy soil. The characteristics of these residues including specific surface areas, morphologies and nutrient sorption capacity were measured. The effects of biorefinery residues on water and nutrient retention were investigated in terms of different particle sizes and loadings. The results indicated that bio-based wastes FB and BM were able to significantly improve water and nutrient retention of sandy soil. The residues with larger surface areas had better water and nutrient retention capability. Specifically, in the addition of 10% loading, FB and BM was able to improve water retention by approximately 150% and 300%, while reduce 99% of ammonium and phosphate concentration in the leachate compare to the soil control, respectively. Copyright © 2014 Elsevier Ltd. All rights reserved.

Breaking ground: Pedological, geological, and ecological implications of soil bioturbation

NASA Astrophysics Data System (ADS)

Wilkinson, Marshall T.; Richards, Paul J.; Humphreys, Geoff S.

Soil and its biota are fundamental components of the "Critical Zone": Earth's living skin that most directly sustains life. Within that zone, geologically-rapid soil and saprolite displacement by biota, particularly invertebrate meso- and macrofauna, affects a large proportion of Earth's soils. This was first recognised by late-19th century observers, on both sides of the Atlantic Ocean, who regarded bioturbation as fundamental to soil formation. Throughout much of the 20th century, however, the agronomical focus of soil scientists and the dominant paradigm of landscape evolution relegated bioturbation. As a result, many aspects of bioturbation are still not widely appreciated. Only in the last few decades has a re-evaluation commenced, in a range of disciplines. Primary effects of bioturbation, which we quantify herein, include soil production from saprolite, the formation of surface mounds, soil burial, and downslope transport. Rates of bioturbation can be as rapid as sustained maximum rates of tectonic uplift. In concert with surface geomorphic processes, bioturbation alters fundamental properties of soil, including particle-size distribution, porosity, the content of carbon and other nutrients, and creep flux rate. The precise influence of biotic mixing is regulated by its depth function. Earth's incredibly diverse soil biota also perform a number of functions, at a range of spatial and temporal scales, that extend beyond soil to landscape evolution, ecosystem engineering, niche construction, and carbon cycling. Understanding these linkages—which have operated since the evolution of trees in the Devonian Period—is of growing importance as we seek a fuller picture of Earth's history to predict and manage its future.

Micro-scale experimental study of Microbial-Induced Carbonate Precipitation (MICP) by using microfluidic devices

NASA Astrophysics Data System (ADS)

Wang, Y.; Soga, K.; DeJong, J. T.; Kabla, A.

2017-12-01

Microbial-induced carbonate precipitation (MICP), one of the bio-mineralization processes, is an innovative subsurface improvement technique for enhancing the strength and stiffness of soils, and controlling their hydraulic conductivity. These macro-scale engineering properties of MICP treated soils controlled by micro-scale factors of the precipitated carbonate, such as its content, amount and distribution in the soil matrix. The precipitation process itself is affected by bacteria amount, reaction kinetics, porous medium geometry and flow distribution in the soils. Accordingly, to better understand the MICP process at the pore scale a new experimental technique that can observe the entire process of MICP at the pore-scale was developed. In this study, a 2-D transparent microfluidic chip made of Polydimethylsiloxane (PDMS) representing the soil matrix was designed and fabricated. A staged-injection MICP treatment procedure was simulated inside the microfluidic chip while continuously monitored using microscopic techniques. The staged-injection MICP treatment procedure started with the injection of bacteria suspension, followed with the bacteria setting for attachment, and then ended with the multiple injections of cementation liquid. The main MICP processes visualized during this procedure included the bacteria transport and attachment during the bacteria injection, the bacteria attachment and growth during the bacteria settling, the bacteria detachment during the cementation liquid injection, the cementation development during the cementation liquid injection, and the cementation development after the completion of cementation liquid injection. It is suggested that the visualization of the main MICP processes using the microfluidic technique can improve understating of the fundamental mechanisms of MICP and consequently help improve the treatment technique for in situ implementation of MICP.

Characteristics of Soil and Organic Carbon Loss Induced by Water Erosion on the Loess Plateau in China

PubMed Central

Li, Zhongwu; Nie, Xiaodong; Chang, Xiaofeng; Liu, Lin; Sun, Liying

2016-01-01

Soil erosion has been a common environmental problem in the Loess Plateau in China. This study aims to better understand the losses of soil organic carbon (SOC) induced by water erosion. Laboratory-simulated rainfall experiments were conducted to investigate the characteristics of SOC loss induced by water erosion. The applied treatments included two rainfall intensities (90 and 120 mm h-1), four slope gradients (10°, 15°, 20°, and 25°), and two typical soil types- silty clay loam and silty loam. Results showed that the sediment OC enrichment ratios (ERoc) in all the events were relative stable with values ranged from 0.85 to1.21 and 0.64 to 1.52 and mean values of 0.98 and 1.01 for silty clay loam and silty loam, respectively. Similar to the ERoc, the proportions of different sized particles in sediment showed tiny variations during erosion processes. No significant correlation was observed between ERoc values and the proportions of sediment particles. Slope, rainfall intensity and soil type almost had no impact on ERoc. These results indicate that the transportation of SOC during erosion processes was nonselective. While the mean SOC loss rates for the events of silty clay loam and silty loam were 0.30 and 0.08 g m-2 min-1, respectively. Greater differences in SOC loss rates were found in events among different soil types. Meanwhile, significant correlations between SOC loss and soil loss for all the events were observed. These results indicated that the amount of SOC loss was influenced primarily by soil loss and the SOC content of the original soil. Erosion pattern and original SOC content are two main factors by which different soils can influence SOC loss. It seems that soil type has a greater impact on SOC loss than rainfall characteristics on the Loess Plateau of China. However, more kinds of soils should be further studied due to the special formation processes in the Loess Plateau. PMID:27124482

Characteristics of Soil and Organic Carbon Loss Induced by Water Erosion on the Loess Plateau in China.

PubMed

Li, Zhongwu; Nie, Xiaodong; Chang, Xiaofeng; Liu, Lin; Sun, Liying

2016-01-01

Soil erosion has been a common environmental problem in the Loess Plateau in China. This study aims to better understand the losses of soil organic carbon (SOC) induced by water erosion. Laboratory-simulated rainfall experiments were conducted to investigate the characteristics of SOC loss induced by water erosion. The applied treatments included two rainfall intensities (90 and 120 mm h-1), four slope gradients (10°, 15°, 20°, and 25°), and two typical soil types- silty clay loam and silty loam. Results showed that the sediment OC enrichment ratios (ERoc) in all the events were relative stable with values ranged from 0.85 to1.21 and 0.64 to 1.52 and mean values of 0.98 and 1.01 for silty clay loam and silty loam, respectively. Similar to the ERoc, the proportions of different sized particles in sediment showed tiny variations during erosion processes. No significant correlation was observed between ERoc values and the proportions of sediment particles. Slope, rainfall intensity and soil type almost had no impact on ERoc. These results indicate that the transportation of SOC during erosion processes was nonselective. While the mean SOC loss rates for the events of silty clay loam and silty loam were 0.30 and 0.08 g m-2 min-1, respectively. Greater differences in SOC loss rates were found in events among different soil types. Meanwhile, significant correlations between SOC loss and soil loss for all the events were observed. These results indicated that the amount of SOC loss was influenced primarily by soil loss and the SOC content of the original soil. Erosion pattern and original SOC content are two main factors by which different soils can influence SOC loss. It seems that soil type has a greater impact on SOC loss than rainfall characteristics on the Loess Plateau of China. However, more kinds of soils should be further studied due to the special formation processes in the Loess Plateau.

Observed Local Soil Moisture-Atmosphere Feedbacks within the Context of Remote SST Anomalies: Lessons From Recent Droughts

NASA Astrophysics Data System (ADS)

Tawfik, A. B.; Dirmeyer, P.; Lawrence, D. M.

2015-12-01

The existence and possible transition from positive to negative soil moisture-atmosphere feedbacks is explored in this presentation using collocated flux tower measurements (Ameriflux) and atmospheric profiles from reanalysis. The focus is on the series of physical processes that lead to these local feedbacks connecting remote sea surface temperature changes (SST anomalies) to local soil moisture and boundary layer responses. Seasonal and Agricultural droughts are particularly useful test beds for examining these feedback processes because they are typically characterized by prolonged stretches of rain-free days followed by some termination condition. To quantify the full process-chain across these distinct spatial scales, complimentary information from several well-established land-atmosphere coupling metrics are used including, but not limited to, Mixing Diagram approaches, Soil Moisture Memory, and the Heated Condensation Framework. Preliminary analysis shows that there may be transitions from negative and positive soil moisture-atmosphere feedbacks as droughts develop. This is largely instigated by persistent atmospheric forcing that initially promotes increased surface latent heat flux, which limits boundary layer depth and dry air entrainment. However, if stagnant synoptic conditions continue eventually soil moisture is depleted to the point of shutting off surface latent heat flux producing deep boundary layers and increased dry air entrainment thus deepening drought stress. A package of standardized Fortran 90 modules called the Coupling Metrics Toolkit (CoMeT; https://github.com/abtawfik/coupling-metrics) used to calculate these land-atmosphere coupling metrics is also briefly presented.

Soil, environmental, and watershed measurements in support of carbon cycling studies in northwestern Mississippi

USGS Publications Warehouse

Huntington, T.G.; Harden, J.W.; Dabney, S.M.; Marion, D.A.; Alonso, C.; Sharpe, J.M.; Fries, T.L.

1998-01-01

Measurements including soil respiration, soil moisture, soil temperature, and carbon export in suspended sediments from small watersheds were recorded at several field sites in northwestern Mississippi in support of hillslope process studies associated with the U.S. Geological Survey's Mississippi Basin Carbon Project (MBCP). These measurements were made to provide information about carbon cycling in agricultural and forest ecosystems to understand the potential role of erosion and deposition in the sequestration of soil organic carbon in upland soils. The question of whether soil erosion and burial constitutes an important net sink of atmospheric carbon dioxide is one hypothesis that the MBCP is evaluating to better understand carbon cycling and climate change. This report contains discussion of methods used and presents data for the period December 1996 through March 1998. Included in the report are ancillary data provided by the U.S. Department of Agriculture (USDA) ARS National Sedimentation Laboratory and U.S. Forest Service (USFS) Center for Bottomland Hardwoods Research on rainfall, runoff, sediment yield, forest biomass and grain yield. Together with the data collected by the USGS these data permit the construction of carbon budgets and the calibration of models of soil organic matter dynamics and sediment transport and deposition. The U.S. Geological Survey (USGS) has established cooperative agreements with the USDA and USFS to facilitate collaborative research at research sites in northwestern Mississippi.

Environmental aspects of produced-water salt releases in onshore and coastal petroleum-producing areas of the conterminous U.S. - a bibliography

USGS Publications Warehouse

Otton, James K.

2006-01-01

Environmental effects associated with the production of oil and gas have been reported since the first oil wells were drilled in the Appalachian Basin in Pennsylvania and Kentucky in the early to mid-1800s. The most significant of these effects are the degradation of soils, ground water, surface water, and ecosystems they support by releases of suspended and dissolved hydrocarbons and co-produced saline water. Produced water salts are less likely than hydrocarbons to be adsorbed by mineral phases in the soil and sediment and are not subject to degradation by biologic processes. Sodium is a major dissolved constituent in most produced waters and it causes substantial degradation of soils through altering of clays and soil textures and subsequent erosion. Produced water salts seem to have the most wide-ranging effects on soils, water quality, and ecosystems. Trace elements, including boron, lithium, bromine, fluorine, and radium, also occur in elevated concentrations in some produced waters. Many trace elements are phytotoxic and are adsorbed and may remain in soils after the saline water has been flushed away. Radium-bearing scale and sludge found in oilfield equipment and discarded on soils pose additional hazards to human health and ecosystems. This bibliography includes studies from across the oil- and natural-gas-producing areas of the conterminous United States that were published in the last 80 yrs. The studies describe the effects of produced water salts on soils, water quality, and ecosystems. Also included are reports that describe (1) the inorganic chemistry of produced waters included in studies of formation waters for various purposes, (2) other sources of salt affecting water quality that may be mistaken for produced water effects, (3) geochemical and geophysical techniques that allow discrimination of salt sources, (4) remediation technologies designed to repair damage caused to soils and ground water by produced water salts, and (5) contamination by naturally occurring radioactive materials (NORM)at oilfield sites.

Impacts of nitrogen fertilization and plant species diversity on soil C accumulation in a lignocellulosic bioenergy cropping system nine years following land conversion

NASA Astrophysics Data System (ADS)

De Graaff, M. A.; Jastrow, J. D.

2017-12-01

Ethanol production from second generation biofuel feedstocks, including the perennial grasses switchgrass (Panicum virgatum L.) and big bluestem (Andropogon gerardii) has expanded rapidly, with the aim to reduce greenhouse gas emissions. However, land conversion for bioenergy production releases carbon (C) stored in soil to the atmosphere as CO2, and creates a C debt in ecosystems. If biofuels are to aid in curbing atmospheric CO2 concentrations, it is important that this initial C debt be repaid rapidly. A variety of management approaches aimed at increasing NPP and soil C input may be used to accelerate the repayment of soil C. We conducted a long-term field experiment located at the Fermilab National Environmental Research Park in IL, that compares a variety of approaches for perennial feedstock production following conversion of an old-field dominated by C3 grasses to a grassland dominated by C4 perennial grasses. Treatments included a variety of big bluestem and switchgrass cultivars grown in monoculture, diversity manipulated at both the species- and cultivar level, and nitrogen (N) applied at two levels (0 and 67 kg/ha). Previous results from this experiment indicated that four years following initiation of this experiment, only choice of plant species significantly affected the rate of bulk soil C-debt repayment. Here we quantified how nine years of fertilization, plant species, and inter- and intra-specific diversity treatments affect soil C accumulation. To increase our detection of changes in soil C and our mechanistic understanding of the processes that drive C accumulation in this experiment, we used the natural abundance C isotope ratio technique to estimate the contribution and fate of root-derived C to soil organic matter pools. Additionally, we evaluated how the different management approaches affected the ecological sustainability of bioenergy production, by quantifying impacts of the treatments on soil micro-and meso fauna abundance and diversity. Our results will improve our understanding of how alternative management approaches in lignocellulosic biofuel cropping systems regulate soil C sequestration, and the processes that influence it.

[Organic carbon and carbon mineralization characteristics in nature forestry soil].

PubMed

Yang, Tian; Dai, Wei; An, Xiao-Juan; Pang, Huan; Zou, Jian-Mei; Zhang, Rui

2014-03-01

Through field investigation and indoor analysis, the organic carbon content and organic carbon mineralization characteristics of six kinds of natural forest soil were studied, including the pine forests, evergreen broad-leaved forest, deciduous broad-leaved forest, mixed needle leaf and Korean pine and Chinese pine forest. The results showed that the organic carbon content in the forest soil showed trends of gradual decrease with the increase of soil depth; Double exponential equation fitted well with the organic carbon mineralization process in natural forest soil, accurately reflecting the mineralization reaction characteristics of the natural forest soil. Natural forest soil in each layer had the same mineralization reaction trend, but different intensity. Among them, the reaction intensity in the 0-10 cm soil of the Korean pine forest was the highest, and the intensities of mineralization reaction in its lower layers were also significantly higher than those in the same layers of other natural forest soil; comparison of soil mineralization characteristics of the deciduous broad-leaved forest and coniferous and broad-leaved mixed forest found that the differences of litter species had a relatively strong impact on the active organic carbon content in soil, leading to different characteristics of mineralization reaction.

Retracing recurring vine mortality patterns over a long duration: case study of a Mediterranean viticultural estate

NASA Astrophysics Data System (ADS)

Vaudour, Emmanuelle; Leclercq, Léa; Gilliot, Jean-Marc; Chaignon, Benoît

2017-04-01

This study was aimed at performing both long term historical and spatial tracing, focusing on the vine mortality patterns and their temporal repetition, across a 6 ha-farm, "Domaine des Chauvets", mainly planted with rainfed black Grenache and Syrah varieties in the Southern Rhone Valley in France. In this estate of long-standing wine-growing history, were mortality patterns randomly distributed or were they related to soil or historical management? Along with soil parameters, soil surface condition, vine biological parameters including vigour, presence of diseases, stock-unearthing were collected in the field at a total of 112 sampling locations. A total of 25 aerial photographs in digitized format from the French National Institute of Geographic and Forest Information (IGN) were examined over the 1947-2010 period, of which 7 were retained for further rectification and processing. This dataset was used to retrace the landuse and planting history for each plot, and then extract the frequency of missing vines. Within-field terroir units were demarcated using support vector machine classification of a set of present-day very high resolution data, including soil apparent electrical conductivity EM38 maps and very high resolution Pléiades satellite images of May 2014 and July 2015. Field and recent data revealed important soil erosion rates which are likely to ruin terroir sustainability and pointed out those units for which soil restoration practices are urgently needed, while the temporal dataset exhibited a repeated spatial pattern of missing vines, throughout several plantings, uprootings, and vine replacements. The frequency of missing vines was related to within-field terroir units and also to past landuse, particularly forest or orchard dating back the 1940s, and current soil organic carbon content. This brings renewed questions about the determinism of vine decline, suggesting contribution of soil degradation processes.

Arctic Tundra Soils: A Microbial Feast That Shrubs Will Cease

NASA Astrophysics Data System (ADS)

Machmuller, M.; Calderon, F.; Cotrufo, M. F.; Lynch, L.; Paul, E. A.; Wallenstein, M. D.

2016-12-01

Rapid climate warming may already be driving rapid decomposition of the vast stocks of carbon in Arctic tundra soils. However, stimulated decomposition may also release nitrogen and support increased plant productivity, potentially counteracting soil carbon losses. At the same time, these two processes interact, with plant derived carbon potentially fueling soil microbes to attack soil organic matter (SOM) to acquire nitrogen- a process known as priming. Thus, differences in the physiology, stoichiometry and microbial interactions among plant species could affect climate-carbon feedbacks. To reconcile these interactive mechanisms, we examined how vegetation type (Betula nana and Eriophorum vaginatum) and fertilization (short-term and long-term) influenced the decomposition of native SOM after labile carbon and nutrient addition. We hypothesized that labile carbon inputs would stimulate the loss of native SOM, but the magnitude of this effect would be indirectly related to soil nitrogen concentrations (e.g. SOM priming would be highest in N-limited soils). We added isotopically enriched (13C) glucose and ammonium nitrate to soils under shrub (B. nana) and tussock (E. vaginatum) vegetation. We found that nitrogen additions stimulated priming only in tussock soils, characterized by lower nutrient concentrations and microbial biomass (p<0.05). There was no evidence of priming in soils that had been fertilized for >20yrs. Rather, we found that long-term fertilization shifted SOM chemistry towards a greater abundance of recalcitrant SOM, lower microbial biomass, and decreased SOM respiration (p<0.05). Our results suggest that, in the short-term, the magnitude of SOM priming is dependent on vegetation and soil nitrogen concentrations, but this effect may not persist if shrubs increase in abundance under climate warming. Therefore, including nitrogen as a control on SOM decomposition and priming is critical to accurately model the effects of climate change on arctic carbon storage.

Soil functional types: surveying the biophysical dimensions of soil security

NASA Astrophysics Data System (ADS)

Cécillon, Lauric; Barré, Pierre

2015-04-01

Soil is a natural capital that can deliver key ecosystem services (ES) to humans through the realization of a series of soil processes controlling ecosystem functioning. Soil is also a diverse and endangered natural resource. A huge pedodiversity has been described at all scales, which is strongly altered by global change. The multidimensional concept soil security, encompassing biophysical, economic, social, policy and legal frameworks of soils has recently been proposed, recognizing the role of soils in global environmental sustainability challenges. The biophysical dimensions of soil security focus on the functionality of a given soil that can be viewed as the combination of its capability and its condition [1]. Indeed, all soils are not equal in term of functionality. They show different processes, provide different ES to humans and respond specifically to global change. Knowledge of soil functionality in space and time is thus a crucial step towards the achievement soil security. All soil classification systems incorporate some functional information, but soil taxonomy alone cannot fully describe the functioning, limitations, resistance and resilience of soils. Droogers and Bouma [2] introduced functional variants (phenoforms) for each soil type (genoform) so as to fit more closely to soil functionality. However, different genoforms can have the same functionality. As stated by McBratney and colleagues [1], there is a great need of an agreed methodology for defining the reference state of soil functionality. Here, we propose soil functional types (SFT) as a relevant classification system for the biophysical dimensions of soil security. Following the definition of plant functional types widely used in ecology, we define a soil functional type as "a set of soil taxons or phenoforms sharing similar processes (e.g. soil respiration), similar effects on ecosystem functioning (e.g. primary productivity) and similar responses to global change (land-use, management or climate) for a particular soil-provided ecosystem service (e.g. climate regulation)". One SFT can thus include several soil types having the same functionality for a particular soil-provided ES. Another consequence is that SFT maps for two different ES may not superimpose over the same area, since some soils may fall in the same SFT for a service and in different SFT for another one. Soil functional types could be assessed and monitored in space and time by a combination of soil functional traits that correspond to inherent and manageable properties of soils. Their metrology would involve either classic (pedological observations) or advanced (molecular ecology, spectrometry, geophysics) tools. SFT could be studied and mapped at all scales, depending on the purpose of the soil security assessment (e.g. global climate modeling, land planning and management, biodiversity conservation). Overall, research is needed to find a pathway from soil pedological maps to SFT maps which would yield important benefits towards the assessment and monitoring of soil security. Indeed, this methodology would allow (i) reducing the spatial uncertainty on the assessment of ES; (ii) identifying and mapping multifunctional soils, which may be the most important soil resource to preserve. References [1] McBratney et al., 2014. Geoderma 213:203-213. [2] Droogers P, Bouma J, 1997. SSSAJ 61:1704-1710.

Numerical Modelling of Speleothem and Dripwater Chemistry: Interpreting Coupled Trace Element and Isotope Proxies for Climate Reconstructions

NASA Astrophysics Data System (ADS)

Owen, R.; Day, C. C.; Henderson, G. M.

2016-12-01

Speleothem palaeoclimate records are widely used but are often difficult to interpret due to the geochemical complexity of the soil-karst-cave system. Commonly analysed proxies (e.g. δ18O, δ13C and Mg/Ca) may be affected by multiple processes along the water flow path from atmospheric moisture source through to the cave drip site. Controls on speleothem chemistry include rainfall and aerosol chemistry, bedrock chemistry, temperature, soil pCO2, the degree of open-system dissolution and prior calcite precipitation. Disentangling the effects of these controls is necessary to fully interpret speleothem palaeoclimate records. To quantify the effects of these processes, we have developed an isotope-enabled numerical model based on the geochemical modelling software PHREEQC. The model calculates dripwater chemistry and isotopes through equilibrium bedrock dissolution and subsequent iterative CO2 degassing and calcite precipitation. This approach allows forward modelling of dripwater and speleothem proxies, both chemical (e.g. Ca concentration, pH, Mg/Ca and Sr/Ca ratios) and isotopic (e.g. δ18O, δ13C, δ44Ca and radiocarbon content), in a unified framework. Potential applications of this model are varied and the model may be readily expanded to include new isotope systems or processes. Here we focus on calculated proxy co-variation due to changes in model parameters. Examples include: - The increase in Ca concentration, decrease in δ13C and increase in radiocarbon content as bedrock dissolution becomes more open-system. - Covariation between δ13C, δ44Ca and trace metal proxies (e.g. Mg/Ca) predicted by changing prior calcite precipitation. - The effect of temperature change on all proxies through the soil-karst-cave system. Separating the impact of soil and karst processes on geochemical proxies allows more quantitative reconstruction of the past environment, and greater understanding in modern cave monitoring studies.

The importance of plant-soil interactions for N mineralisation in different soil types

NASA Astrophysics Data System (ADS)

Murphy, Conor; Paterson, Eric; Baggs, Elizabeth; Morley, Nicholas; Wall, David; Schulte, Rogier

2013-04-01

The last hundred years has seen major advancements in our knowledge of nitrogen mineralisation in soil, but key drivers and controls remain poorly understood. Due to an increase in the global population there is a higher demand on food production. To accommodate this demand agriculture has increased its use of N based fertilizers, but these pose risks for water quality and GHG emissions as N can be lost through nitrate leaching, ammonia volatilization, and denitrification processes (Velthof, et al., 2009). Therefore, understanding the underlying processes that determine the soils ability to supply N to the plant is vital for effective optimisation of N-fertilisation with crop demand. Carbon rich compounds exuded from plant roots to the rhizosphere, which are utilized by the microbial biomass and support activities including nutrient transformations, may be a key unaccounted for driver of N mineralisation. The main aim of this study was to study the impact of root exudates on turnover of C and N in soil, as mediated by the microbial community. Two soil types, known to contrast in N-mineralisation capacity, were used to determine relationships between C inputs, organic matter mineralisation (priming effects) and N fluxes. 15N and 13C stable isotope approaches were used to quantify the importance of rhizosphere processes on C and N mineralisation. Gross nitrogen mineralisation was measured using 15N pool dilution. Total soil CO2 efflux was measured and 13C isotope partitioning was applied to quantify SOM turnover and microbial biomass respiration. Also, 13C was traced through the microbial biomass (chloroform fumigation) to separate pool-substitution effects (apparent priming) from altered microbial utilisation of soil organic matter (real priming effects). Addition of labile carbon resulted in an increase in N-mineralisation from soil organic matter in both soils. Concurrent with this there was an increase in microbial biomass size, indicating that labile C elicited real priming effects that mobilised N from organic matter. The results from this experiment indicate that rhizosphere processes play an important role in mediating rates of C and N mineralisation and should be accounted for in estimating soil N-supply capacities. Velthof, G.L., Oudendag, D., Witzke, H.P., Asman, W.A.H., Klimont, Z., Oenema, O., 2009. Integrated assessment of nitrogen losses from agriculture in EU-27 using MITERRA-EUROPE. Journal of Environmental Quality 38, 402-417.

Unveiling Microbial Carbon Cycling Processes in Key U.S. Soils using ''Omics''

DOE Office of Scientific and Technical Information (OSTI.GOV)

Myrold, David D.; Bottomely, Peter J.; Jumpponen, Ari

2014-09-17

Soils process and store large amounts of C; however, considerable uncertainty still exists about the details of that influence microbial partitioning of C into soil C pools, and what are the main influential forces that control the fraction of the C input that is stabilized. The soil microbial community is genotypically and phenotypically diverse. Despite our ability to predict the kinds of regional environmental changes that will accompany global climate change, it is not clear how the microbial community will respond to climate-induced modification of precipitation and inter-precipitation intervals, and if this response will affect the fate of C depositedmore » into soil by the local plant community. Part of this uncertainty lies with our ignorance of how the microbial community adapts genotypically and physiologically to changes in soil moisture brought about by shifts in precipitation. Our overarching goal is to harness the power of multiple meta-omics tools to gain greater understanding of the functioning of whole-soil microbial communities and their role in C cycling. We will do this by meeting the following three objectives: 1. Further develop and optimize a combination of meta-omics approaches to study how environmental factors affect microbially-mediated C cycling processes. 2. Determine the impacts of long-term changes in precipitation timing on microbial C cycling using an existing long-term field manipulation of a tallgrass prairie soil. 3. Conduct laboratory experiments that vary moisture and C inputs to confirm field observations of the linkages between microbial communities and C cycling processes. We took advantage of our state-of-the-art expertise in community “omics” to better understand the functioning soil C cycling within the Great Prairie ecosystem, including our ongoing Konza Prairie soil metagenome flagship project at JGI and the unique rainfall manipulation plots (RaMPs) established at this site more than a decade ago. We employed a systems biology approach, considering the complex soil microbial community as a functioning system and using state-of-the-art metatranscriptomic, metaproteomic, and metabolomic approaches. These omics tools were refined, applied to field experiments, and confirmed with controlled laboratory studies. Our experiments were designed to specifically identify microbial community members and processes that are instrumental players in processing of C in the prairie soils and how these processes are impacted by wetting and drying events. This project addresses a key ecosystem in the United States that current climate models predict will be subjected to dramatic changes in rainfall patterns as a result of global warming. Currently Mollisols, such as those of the tallgrass prairie, are thought to sequester more C than is released into the atmosphere, but it is not known what changes in rainfall patterns will have on future C fluxes. Through an analysis of the molecular response of the soil microbial community to shifts in precipitation cycles that are accompanied by phenologically driven changes in quality of plant C rhizodeposits, we gained deeper insight into how the metabolism of microbes has adapted to different precipitation regimes and the impact of this adaption on the fate of C deposited into soil. In doing so, we addressed key questions about the microbial cycling of C in soils that have been identified by the DOE.« less

Simulating the influence of snow surface processes on soil moisture dynamics and streamflow generation in an alpine catchment

NASA Astrophysics Data System (ADS)

Wever, Nander; Comola, Francesco; Bavay, Mathias; Lehning, Michael

2017-08-01

The assessment of flood risks in alpine, snow-covered catchments requires an understanding of the linkage between the snow cover, soil and discharge in the stream network. Here, we apply the comprehensive, distributed model Alpine3D to investigate the role of soil moisture in the predisposition of the Dischma catchment in Switzerland to high flows from rainfall and snowmelt. The recently updated soil module of the physics-based multilayer snow cover model SNOWPACK, which solves the surface energy and mass balance in Alpine3D, is verified against soil moisture measurements at seven sites and various depths inside and in close proximity to the Dischma catchment. Measurements and simulations in such terrain are difficult and consequently, soil moisture was simulated with varying degrees of success. Differences between simulated and measured soil moisture mainly arise from an overestimation of soil freezing and an absence of a groundwater description in the Alpine3D model. Both were found to have an influence in the soil moisture measurements. Using the Alpine3D simulation as the surface scheme for a spatially explicit hydrologic response model using a travel time distribution approach for interflow and baseflow, streamflow simulations were performed for the discharge from the catchment. The streamflow simulations provided a closer agreement with observed streamflow when driving the hydrologic response model with soil water fluxes at 30 cm depth in the Alpine3D model. Performance decreased when using the 2 cm soil water flux, thereby mostly ignoring soil processes. This illustrates that the role of soil moisture is important to take into account when understanding the relationship between both snowpack runoff and rainfall and catchment discharge in high alpine terrain. However, using the soil water flux at 60 cm depth to drive the hydrologic response model also decreased its performance, indicating that an optimal soil depth to include in surface simulations exists and that the runoff dynamics are controlled by only a shallow soil layer. Runoff coefficients (i.e. ratio of rainfall over discharge) based on measurements for high rainfall and snowmelt events were found to be dependent on the simulated initial soil moisture state at the onset of an event, further illustrating the important role of soil moisture for the hydrological processes in the catchment. The runoff coefficients using simulated discharge were found to reproduce this dependency, which shows that the Alpine3D model framework can be successfully applied to assess the predisposition of the catchment to flood risks from both snowmelt and rainfall events.

Interactions between soil thermal and hydrological dynamics in the response of Alaska ecosystems to fire disturbance

Treesearch

Shuhua Yi; David McGuire; Jennifer Harden; Eric Kasischke; Kristen Manies; Larr Hinzman; Anna Liljedahl; Jim Randerson; Heping Liu; Vladimire Romanovsky; Sergei Marchenko; Yongwon Kim

2009-01-01

Soil temperature and moisture are important factors that control many ecosystem processes. However, interactions between soil thermal and hydrological processes are not adequately understood in cold regions, where the frozen soil, fire disturbance, and soil drainage play important roles in controlling interactions among these processes. These interactions were...

Regulatory Status of Fumigants

EPA Pesticide Factsheets

Information on the EPA reregistration process for four soil fumigant pesticides in May 2009: chloropicrin, dazomet, metam sodium/potassium, and methyl bromide. New safety measures were included in the reregistration eligibility decisions (REDs).

Poplar response to cadmium and lead soil contamination.

PubMed

Radojčić Redovniković, Ivana; De Marco, Alessandra; Proietti, Chiara; Hanousek, Karla; Sedak, Marija; Bilandžić, Nina; Jakovljević, Tamara

2017-10-01

An outdoor pot experiment was designed to study the potential of poplar (Populus nigra 'Italica') in phytoremediation of cadmium (Cd) and lead (Pb). Poplar was treated with a combination of different concentrations of Cd (w = 10, 25, 50mgkg -1 soil) and Pb (400, 800, 1200mgkg -1 soil) and several physiological and biochemical parameters were monitored including the accumulation and distribution of metals in different plant parts (leaf, stem, root). Simultaneously, the changes in the antioxidant system in roots and leaves were monitored to be able to follow synergistic effects of both heavy metals. Moreover, a statistical analysis based on the Random Forests Analysis (RFA) was performed in order to determine the most important predictors affecting growth and antioxidative machinery activities of poplar under heavy metal stress. The study demonstrated that tested poplar could be a good candidate for phytoextraction processes of Cd in moderately contaminated soils, while in heavily contaminated soil it could be only considered as a phytostabilisator. For Pb remediation only phytostabilisation process could be considered. By using RFA we pointed out that it is important to conduct the experiments in an outdoor space and include environmental conditions in order to study more realistic changes of growth parameters and accumulation and distribution of heavy metals. Also, to be able to better understand the interactions among previously mentioned parameters, it is important to conduct the experiments during prolonged time exposure., This is especially important for the long life cycle woody species. Copyright © 2017. Published by Elsevier Inc.

Technical Report Series on Global Modeling and Data Assimilation. Volume 42; Soil Moisture Active Passive (SMAP) Project Calibration and Validation for the L4_C Beta-Release Data Product

NASA Technical Reports Server (NTRS)

Koster, Randal D. (Editor); Kimball, John S.; Jones, Lucas A.; Glassy, Joseph; Stavros, E. Natasha; Madani, Nima (Editor); Reichle, Rolf H.; Jackson, Thomas; Colliander, Andreas

2015-01-01

During the post-launch Cal/Val Phase of SMAP there are two objectives for each science product team: 1) calibrate, verify, and improve the performance of the science algorithms, and 2) validate accuracies of the science data products as specified in the L1 science requirements according to the Cal/Val timeline. This report provides analysis and assessment of the SMAP Level 4 Carbon (L4_C) product specifically for the beta release. The beta-release version of the SMAP L4_C algorithms utilizes a terrestrial carbon flux model informed by SMAP soil moisture inputs along with optical remote sensing (e.g. MODIS) vegetation indices and other ancillary biophysical data to estimate global daily NEE and component carbon fluxes, particularly vegetation gross primary production (GPP) and ecosystem respiration (Reco). Other L4_C product elements include surface (<10 cm depth) soil organic carbon (SOC) stocks and associated environmental constraints to these processes, including soil moisture and landscape FT controls on GPP and Reco (Kimball et al. 2012). The L4_C product encapsulates SMAP carbon cycle science objectives by: 1) providing a direct link between terrestrial carbon fluxes and underlying freeze/thaw and soil moisture constraints to these processes, 2) documenting primary connections between terrestrial water, energy and carbon cycles, and 3) improving understanding of terrestrial carbon sink activity in northern ecosystems.

Variation in soil macro-fauna diversity in seven humus orders of a Parrotio-Carpinetum forest association on Chromic Cambisols of Shast-klateh area in Iran

NASA Astrophysics Data System (ADS)

Izadi, M.; Habashi, H.; Waez-Mousavi, S. M.

2017-03-01

Soil biodiversity includes organisms which spend a part or all of their life cycle on or in the soil. Among soil-dwelling animals, macro-fauna as an important group of animals have important effects on the dynamics of soil organic matter and litter decomposition process. The humus forms interact with the climatic conditions, flora, as well as soil fauna, and microbial activity. In new humus form classifications, soil organisms play an important role in separation of humus horizons from one another. The subject of this study was to determine the diversity of macro fauna for different humus forms. We determined humus forms using morphological classification, and then 69 random samples were taken from plots of 100 cm2 in area, and soil macro-fauna species were collected by hand sorting method. Two classes of humus forms, including Mull (with three humus orders, namely Dysmull, Oligomull, and Mesomull,) and Amphi (with four humus orders, namely Leptoamphi, Eumacroamphi, Eumesoamphi, and Pachyamphi) were identified. A number of 13 macro-fauna orders were identified using identification key. Among the humus orders, Shannon diversity, Simpson evenness and Margalef richness indices were the highest in Pachyamphi order. Arthropod diversity in Pachyamphi humus order was higher than those of Mull. These results showed that diversity of soil macrofauna increase by increasing the thickness of the organic horizons (OL, OF, OH), especially OH horizon.

Electrical Imaging of Infiltration in Agricultural Soils on Long Island, New York

NASA Astrophysics Data System (ADS)

Lampousis, A.; Kenyon, P. M.; Sanwald, K.; Steiner, N.

2007-12-01

High resolution electrical resistivity imaging of vadose zone infiltration experiments was conducted on agricultural soils by the City College and Graduate Center of CUNY, in cooperation with Cornell University's Agricultural Stewardship Program and Long Island Horticultural Research and Extension Center (LIHREC) in Riverhead, New York. Measurements were made in active vineyards with a commercial resistivity imaging system, using a half- meter electrode spacing. Soils considered were Riverhead sandy loam (RdA), Haven loam (HaA), and Bridgehampton silty loam (BgA). The Riverhead and Haven soils are the most common types found on eastern Long Island. The Bridgehampton is considered the most fertile. Soil samples and measurements of soil compaction were collected at the same time as the geophysical measurements. In addition, remote sensing data were obtained for the three sites and processed to produce normalized difference vegetation index (NDVI) data to evaluate potential correlations between vegetation vigor, soil texture and water migration patterns. Applications of this study include continuous water content monitoring in high value cash crops (precision agriculture). Changes in electrical resistivity during infiltration are clearly visible at all three locations. Preliminary analysis of the results shows correlations of baseline resistivity with particle size distributions and correlations between changes in resistivity during infiltration and soil compaction data. Time-lapse electrical images of the three sites will also be compared with published properties for these soils, including particle size distribution, saturated hydraulic conductivity, available water capacity, and surface texture.

A Multiscale Approach to Modeling Carbon and Nitrogen Cycling within a High Elevation Watershed

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lawrence, Corey

This funding represents a small sub-award related the larger project titled: A Multiscale Approach to Modeling Carbon and Nitrogen Cycling within a High Elevation Watershed. The goal of the sub-award was to facilitate the characterization of carbon and radiocarbon data collected from the East River watershed outside Gothic, Colorado USA. During the period of funding from 8/1/15 until 7/31/17, we sampled 40 soil profiles and collected ~325 soil samples. This funding supported the collection, processing, and elemental analysis of each of these samples. In addition, the funding allowed for the further density separation of a subset of soil resulting inmore » 60 measurements of 13C and 14C of bulk soil and density separates. Funding also supported installation of temperature and moisture data sensors arrays, soil gas wells, and soil water lysimeters. From this infrastructure, a steady stream data including soil gas, water, and physical information have been generated to support the larger research project.« less

Lessons Learned from 2 Decades of Modelling Forest Dead Organic Matter and Soil Carbon at the National Scale

NASA Astrophysics Data System (ADS)

Shaw, C.; Kurz, W. A.; Metsaranta, J.; Bona, K. A.; Hararuk, O.; Smyth, C.

2017-12-01

The Carbon Budget Model of the Canadian Forest Sector (CBM-CFS3) is a forest carbon budget model that operates on individual stands. It is applied from regional to national-scales in Canada for national and international reporting of GHG emissions and removals and in support of analyses of forest sector mitigation options and other scientific and policy questions. This presentation will review the history and continuous improvement process of representations of dead organic matter (DOM) and soil carbon modelling. Early model versions in which dead organic matter (DOM) pools only included litter, downed deadwood and soil, to the current version where these pools are estimated separately to better compare model estimates against field measurements, or new pools have been added. Uncertainty analyses consistently point at soil C pools as large sources of uncertainty. With the new ground plot measurements from the National Forest Inventory, and with a newly compiled forest soil carbon database, we have recently completed a model data assimilation exercise that helped reduce parameter uncertainties. Lessons learned from the continuous improvement process will be summarised and we will discuss how model modification have led to improved representation of DOM and soil carbon dynamics. We conclude by suggesting future research priorities that can advance DOM and soil carbon modelling in Canadian forest ecosystems.

Stochastic modeling of the migration of Cs-137 in the soil considering a power law tailing in space

NASA Astrophysics Data System (ADS)

Oka, Hiroki; Hatano, Yuko

2016-04-01

We develop a theoretical model to reproduce the measured data of Cs-137 in the soil due to the Fukushima Daiichi NPP accident. In our past study, we derived the analytic solution under the generalized Robin boundary condition (Oka-Yamamoto solution). This is a generalization of the He-Walling solution (1996). We compared our solution with the Fukushima soil data of for 3 years after the accident and found that the concentration of Cs-137 has a discrepancy from our solution, specifically in a deep part because the depth profiles have a power law tailing. Therefore, we improved our model in the following aspect. When Cs particle (or Cs solution) migrate in the soil, the diffusion coefficient should be the results of many processes in the soil. These processes include the effect of various materials which constitute the soil (clay, litter, sand), or the variations of pore size in the soil. Hence we regard the diffusion coefficient as the stochastic variable, we derive the model. Specifically, we consider the solution of ADE to be the conditional probability C(x,t|D) in terms of the diffusion coefficient D and calculate C(x,t)=∫_(0~∞) C(x,t|D)*f(D)*dD, where f(D) is the probability density function of D. This model has a power law tailing in space like the space-fractional ADE.

Can nanotechnology deliver the promised benefits without negatively impacting soil microbial life?

PubMed

Dimkpa, Christian O

2014-09-01

Nanotechnology exploits the enhanced reactivity of materials at the atomic scale to improve various applications for humankind. In agriculture, potential nanotechnology applications include crop protection and fertilization. However, such benefits could come with risks for the environment: non-target plants, plant-beneficial soil microbes and other life forms could be impacted if nanoparticles (nanomaterials) contaminate the environment. This review evaluates the impact of the major metallic nanoparticles (Ag, ZnO, CuO, CeO2 , TiO2 , and FeO-based nanoparticles) on soil microbes involved in agricultural processes. The current literature indicate that in addition to population and organismal-scale effects on microbes, other subtle impacts of nanoparticles are seen in the nitrogen cycle, soil enzyme activities, and processes involved in iron metabolism, phytohormone, and antibiotic production. These effects are negative or positive, the outcome being dependent on specific nanoparticles. Collectively, published results suggest that nanotechnology portends considerable, many negative, implications for soil microbes and, thus, agricultural processes that are microbially driven. Nonetheless, the potential of plant and soil microbial processes to mitigate the bioreactivity of nanoparticles also are observed. Whereas the roots of most terrestrial plants are associated with microbes, studies of nanoparticle interactions with plants and microbes are generally conducted separately. The few studies in actual microbe-plant systems found effects of nanoparticles on the functioning of arbuscular mycorrhizal fungi, nitrogen fixation, as well as on the production of microbial siderophores in the plant rhizosphere. It is suggested that a better understanding of the agro-ecological ramifications of nanoparticles would require more in-depth interactive studies in combined plant-microbe-nanoparticle systems. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

ForCent model development and testing using the Enriched Background Isotope Study experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parton, W.J.; Hanson, P. J.; Swanston, C.

The ForCent forest ecosystem model was developed by making major revisions to the DayCent model including: (1) adding a humus organic pool, (2) incorporating a detailed root growth model, and (3) including plant phenological growth patterns. Observed plant production and soil respiration data from 1993 to 2000 were used to demonstrate that the ForCent model could accurately simulate ecosystem carbon dynamics for the Oak Ridge National Laboratory deciduous forest. A comparison of ForCent versus observed soil pool {sup 14}C signature ({Delta} {sup 14}C) data from the Enriched Background Isotope Study {sup 14}C experiment (1999-2006) shows that the model correctly simulatesmore » the temporal dynamics of the {sup 14}C label as it moved from the surface litter and roots into the mineral soil organic matter pools. ForCent model validation was performed by comparing the observed Enriched Background Isotope Study experimental data with simulated live and dead root biomass {Delta} {sup 14}C data, and with soil respiration {Delta} {sup 14}C (mineral soil, humus layer, leaf litter layer, and total soil respiration) data. Results show that the model correctly simulates the impact of the Enriched Background Isotope Study {sup 14}C experimental treatments on soil respiration {Delta} {sup 14}C values for the different soil organic matter pools. Model results suggest that a two-pool root growth model correctly represents root carbon dynamics and inputs to the soil. The model fitting process and sensitivity analysis exposed uncertainty in our estimates of the fraction of mineral soil in the slow and passive pools, dissolved organic carbon flux out of the litter layer into the mineral soil, and mixing of the humus layer into the mineral soil layer.« less

ForCent Model Development and Testing using the Enriched Background Isotope Study (EBIS) Experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parton, William; Hanson, Paul J; Swanston, Chris

The ForCent forest ecosystem model was developed by making major revisions to the DayCent model including: (1) adding a humus organic pool, (2) incorporating a detailed root growth model, and (3) including plant phenological growth patterns. Observed plant production and soil respiration data from 1993 to 2000 were used to demonstrate that the ForCent model could accurately simulate ecosystem carbon dynamics for the Oak Ridge National Laboratory deciduous forest. A comparison of ForCent versus observed soil pool 14C signature (? 14C) data from the Enriched Background Isotope Study 14C experiment (1999-2006) shows that the model correctly simulates the temporal dynamicsmore » of the 14C label as it moved from the surface litter and roots into the mineral soil organic matter pools. ForCent model validation was performed by comparing the observed Enriched Background Isotope Study experimental data with simulated live and dead root biomass ? 14C data, and with soil respiration ? 14C (mineral soil, humus layer, leaf litter layer, and total soil respiration) data. Results show that the model correctly simulates the impact of the Enriched Background Isotope Study 14C experimental treatments on soil respiration ? 14C values for the different soil organic matter pools. Model results suggest that a two-pool root growth model correctly represents root carbon dynamics and inputs to the soil. The model fitting process and sensitivity analysis exposed uncertainty in our estimates of the fraction of mineral soil in the slow and passive pools, dissolved organic carbon flux out of the litter layer into the mineral soil, and mixing of the humus layer into the mineral soil layer.« less

Planting richness affects the recovery of vegetation and soil processes in constructed wetlands following disturbance

USGS Publications Warehouse

Means, Mary M.; Ahn, Changwoo; Noe, Gregory

2017-01-01

The resilience of constructed wetland ecosystems to severe disturbance, such as a mass herbivory eat-out or soil disturbance, remains poorly understood. In this study, we use a controlled mesocosm experiment to examine how original planting diversity affects the ability of constructed freshwater wetlands to recover structurally and functionally after a disturbance (i.e., aboveground harvesting and soil coring). We assessed if the planting richness of macrophyte species influences recovery of constructed wetlands one year after a disturbance. Mesocosms were planted in richness groups with various combinations of either 1, 2, 3, or 4 species (RG 1–4) to create a gradient of richness. Structural wetland traits measured include morphological regrowth of macrophytes, soil bulk density, soil moisture, soil %C, and soil %N. Functional wetland traits measured include above ground biomass production, soil potential denitrification, and soil potential microbial respiration. Total mesocosm cover increased along the gradient of plant richness (43.5% in RG 1 to 84.5% in RG 4) in the growing season after the disturbance, although not all planted individuals recovered. This was largely attributed to the dominance of the obligate annual species. The morphology of each species was affected negatively by the disturbance, producing shorter, and fewer stems than in the years prior to the disturbance, suggesting that the communities had not fully recovered one year after the disturbance. Soil characteristics were almost uniform across the planting richness gradient, but for a few exceptions (%C, C:N, and non-growing season soil moisture were higher slightly in RG 2). Denitrification potential (DEA) increased with increasing planting richness and was influenced by the abundance and quality of soil C. Increased open space in unplanted mesocosms and mesocosms with lower species richness increased labile C, leading to higher C mineralization rates.

Detection of Soil Nitrogen Using Near Infrared Sensors Based on Soil Pretreatment and Algorithms

PubMed Central

Nie, Pengcheng; Dong, Tao; He, Yong; Qu, Fangfang

2017-01-01

Soil nitrogen content is one of the important growth nutrient parameters of crops. It is a prerequisite for scientific fertilization to accurately grasp soil nutrient information in precision agriculture. The information about nutrients such as nitrogen in the soil can be obtained quickly by using a near-infrared sensor. The data can be analyzed in the detection process, which is nondestructive and non-polluting. In order to investigate the effect of soil pretreatment on nitrogen content by near infrared sensor, 16 nitrogen concentrations were mixed with soil and the soil samples were divided into three groups with different pretreatment. The first group of soil samples with strict pretreatment were dried, ground, sieved and pressed. The second group of soil samples were dried and ground. The third group of soil samples were simply dried. Three linear different modeling methods are used to analyze the spectrum, including partial least squares (PLS), uninformative variable elimination (UVE), competitive adaptive reweighted algorithm (CARS). The model of nonlinear partial least squares which supports vector machine (LS-SVM) is also used to analyze the soil reflectance spectrum. The results show that the soil samples with strict pretreatment have the best accuracy in predicting nitrogen content by near-infrared sensor, and the pretreatment method is suitable for practical application. PMID:28492480

Soil Management Plan for the Oak Ridge Y-12 National Security Complex Oak Ridge, Tennessee

DOE Office of Scientific and Technical Information (OSTI.GOV)

None

2005-03-02

This Soil Management Plan applies to all activities conducted under the auspices of the National Nuclear Security Administration (NNSA) Oak Ridge Y-12 National Security Complex (Y-12) that involve soil disturbance and potential management of waste soil. The plan was prepared under the direction of the Y-12 Environmental Compliance Department of the Environment, Safety, and Health Division. Soil disturbances related to maintenance activities, utility and building construction projects, or demolition projects fall within the purview of the plan. This Soil Management Plan represents an integrated, visually oriented, planning and information resource tool for decision making involving excavation or disturbance of soilmore » at Y-12. This Soil Management Plan addresses three primary elements. (1) Regulatory and programmatic requirements for management of soil based on the location of a soil disturbance project and/or the regulatory classification of any contaminants that may be present (Chap. 2). Five general regulatory or programmatic classifications of soil are recognized to be potentially present at Y-12; soil may fall under one or more these classifications: (a) Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) pursuant to the Oak Ridge Reservation (ORR) Federal Facilities Agreement; (b) Resource Conservation and Recovery Act (RCRA); (c) RCRA 3004(u) solid waste managements units pursuant to the RCRA Hazardous and Solid Waste Amendments Act of 1984 permit for the ORR; (d) Toxic Substances and Control Act-regulated soil containing polychlorinated biphenyls; and (e) Radiologically contaminated soil regulated under the Atomic Energy Act review process. (2) Information for project planners on current and future planned remedial actions (RAs), as prescribed by CERCLA decision documents (including the scope of the actions and remedial goals), land use controls implemented to support or maintain RAs, RCRA post-closure regulatory requirements for former waste management units, legacy contamination source areas and distribution of contamination in soils, and environmental infrastructure (e.g., caps, monitoring systems, etc.) that is in place or planned in association with RAs. (3) Regulatory considerations and processes for management and disposition of waste soil upon generation, including regulatory drivers, best management practices (BMPs), waste determination protocols, waste acceptance criteria, and existing waste management procedures and BMPs for Y-12. This Soil Management Plan provides information to project planners to better coordinate their activities with other organizations and programs with a vested interest in soil disturbance activities at Y-12. The information allows project managers and maintenance personnel to evaluate and anticipate potential contaminant levels that may be present at a proposed soil disturbance site prior to commencement of activities and allows a more accurate assessment of potential waste management requirements.« less

Ground-level climate at a peatland wind farm in Scotland is affected by wind turbine operation

NASA Astrophysics Data System (ADS)

Armstrong, Alona; Burton, Ralph R.; Lee, Susan E.; Mobbs, Stephen; Ostle, Nicholas; Smith, Victoria; Waldron, Susan; Whitaker, Jeanette

2016-04-01

The global drive to produce low-carbon energy has resulted in an unprecedented deployment of onshore wind turbines, representing a significant land use change for wind energy generation with uncertain consequences for local climatic conditions and the regulation of ecosystem processes. Here, we present high-resolution data from a wind farm collected during operational and idle periods that shows the wind farm affected several measures of ground-level climate. Specifically, we discovered that operational wind turbines raised air temperature by 0.18 °C and absolute humidity (AH) by 0.03 g m-3 during the night, and increased the variability in air, surface and soil temperature throughout the diurnal cycle. Further, the microclimatic influence of turbines on air temperature and AH decreased logarithmically with distance from the nearest turbine. These effects on ground-level microclimate, including soil temperature, have uncertain implications for biogeochemical processes and ecosystem carbon cycling, including soil carbon stocks. Consequently, understanding needs to be improved to determine the overall carbon balance of wind energy.

Water limitations to carbon exchange in old-growth and young ponderosa pine stands.

PubMed

Irvine, J; Law, B E; Anthoni, P M; Meinzer, F C

2002-02-01

We investigated the impact of seasonal soil water deficit on the processes driving net ecosystem exchange of carbon (NEE) in old-growth and recently regenerating ponderosa pine (Pinus ponderosa Doug. ex Laws.) stands in Oregon. We measured seasonal patterns of transpiration, canopy conductance and NEE, as well as soil water, soil temperature and soil respiration. The old-growth stand (O) included two primary age classes (50 and 250 years), had a leaf area index (LAI) of 2.1 and had never been logged. The recently regenerating stand (Y) consisted predominantly of 14-year-old ponderosa pine with an LAI of 1.0. Both stands experienced similar meteorological conditions with moderately cold wet winters and hot dry summers. By August, soil volumetric water content within the upper 30 cm had declined to a seasonal minimum of 0.07 at both sites. Between April and June, both stands showed similar rates of transpiration peaking at 0.96 mm day(-1); thereafter, trees at the Y site showed increasing drought stress with canopy stomatal resistance increasing 6-fold by mid-August relative to values for trees at the O site. Over the same period, predawn water potential (psi(pd)) of trees at the Y site declined from -0.54 to -1.24 MPa, whereas psi(pd) of trees at the O site remained greater than -0.8 MPa throughout the season. Soil respiration at the O site showed a strong seasonal correlation with soil temperature with no discernible constraints imposed by declining soil water. In contrast, soil respiration at the Y site peaked before seasonal maximal soil temperatures and declined thereafter with declining soil water. No pronounced seasonal pattern in daytime NEE was observed at either site between April and September. At the Y site this behavior was driven by concurrent soil water limitations on soil respiration and assimilation, whereas there was no evidence of seasonal soil water limitations on either process at the O site.

Soil frost-induced soil moisture precipitation feedback and effects on atmospheric states

NASA Astrophysics Data System (ADS)

Hagemann, Stefan; Blome, Tanja; Ekici, Altug; Beer, Christian

2016-04-01

Permafrost or perennially frozen ground is an important part of the terrestrial cryosphere; roughly one quarter of Earth's land surface is underlain by permafrost. As it is a thermal phenomenon, its characteristics are highly dependent on climatic factors. The impact of the currently observed warming, which is projected to persist during the coming decades due to anthropogenic CO2 input, certainly has effects for the vast permafrost areas of the high northern latitudes. The quantification of these effects, however, is scientifically still an open question. This is partly due to the complexity of the system, where several feedbacks are interacting between land and atmosphere, sometimes counterbalancing each other. Moreover, until recently, many global circulation models (GCMs) and Earth system models (ESMs) lacked the sufficient representation of permafrost physics in their land surface schemes. Within the European Union FP7 project PAGE21, the land surface scheme JSBACH of the Max-Planck-Institute for Meteorology ESM (MPI-ESM) has been equipped with the representation of relevant physical processes for permafrost studies. These processes include the effects of freezing and thawing of soil water for both energy and water cycles, thermal properties depending on soil water and ice contents, and soil moisture movement being influenced by the presence of soil ice. In the present study, it will be analysed how these permafrost relevant processes impact large-scale hydrology and climate over northern hemisphere high latitude land areas. For this analysis, the atmosphere-land part of MPI-ESM, ECHAM6-JSBACH, is driven by prescribed observed SST and sea ice in an AMIP2-type setup with and without the newly implemented permafrost processes. Results show a large improvement in the simulated discharge. On one hand this is related to an improved snowmelt peak of runoff due to frozen soil in spring. On the other hand a subsequent reduction of soil moisture leads to a positive land atmosphere feedback to precipitation over the high latitudes, which reduces the model's wet biases in precipitation and evapotranspiration during the summer. This is noteworthy as soil moisture - atmosphere feedbacks have previously not been in the research focus over the high latitudes. These results point out the importance of high latitude physical processes at the land surface for the regional climate.

Assessment of molecular marker compounds as an index of the biodegradation of diesel fuel hydrocarbons in soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Voos, G.; Mills, G.; O`Neill, J.

1996-10-01

The weathering of petroleum hydrocarbons in the soil environment is the sum of biological, physical and chemical processes. It is often difficult to clearly discern microbial from abiotic contributions to the overall process. This is especially important in assessing the effectiveness of various in-situ bioremediation technologies. We examined molecular marker compounds, including pristane, phytane, diterpenoid hydrocarbons, farnesane and norpristane, and the ratios n-C17/pristane and n-C18/phytane to evaluate their use as an index of biodegradation of diesel fuel in contaminated soil. The study was conducted using microcosms containing 200 g of contaminated soil. Microcosms were destructively sampled on days 0, 1,more » 2, 4, 8, 14, 33 and 64 of the experiment. The soil was analyzed for straight-chained, branched-chained, and alicyclic petroleum hydrocarbons using high-resolution gas chromatography. Results indicate that by day 33 of the experiment, pristane and phytane were present at significantly greater concentrations than their corresponding n-alkanes and the other marker compounds analyzed. There is a strong correlation between the amount of pristane and phytane present in the soil and the amount of total extractable petroleum hydrocarbons (TEPH) measured during the course of the experiment.« less

Voids at the tunnel-soil interface for calculation of ground vibration from underground railways

NASA Astrophysics Data System (ADS)

Jones, Simon; Hunt, Hugh

2011-01-01

Voids at the tunnel-soil interface are not normally considered when predicting ground vibration from underground railways. The soil is generally assumed to be continuously bonded to the outer surface of the tunnel to simplify the modelling process. Evidence of voids around underground railways motivated the study presented herein to quantify the level of uncertainty in ground vibration predictions associated with neglecting to include such voids at the tunnel-soil interface. A semi-analytical method is developed which derives discrete transfers for the coupled tunnel-soil model based on the continuous Pipe-in-Pipe method. The void is simulated by uncoupling the appropriate nodes at the interface to prevent force transfer between the systems. The results from this investigation show that relatively small voids ( 4 m×90∘) can significantly affect the rms velocity predictions in the near-field and moderately affect predictions in the far-field. Sensitivity of the predictions to void length and void sector angle are both deemed to be significant. The findings from this study suggest that the uncertainty associated with assuming a perfect bond at the tunnel-soil interface in an area with known voidage can reasonably reach ±5 dB and thus should be considered in the design process.

Improved representations of coupled soil-canopy processes in the CABLE land surface model (Subversion revision 3432)

NASA Astrophysics Data System (ADS)

Haverd, Vanessa; Cuntz, Matthias; Nieradzik, Lars P.; Harman, Ian N.

2016-09-01

CABLE is a global land surface model, which has been used extensively in offline and coupled simulations. While CABLE performs well in comparison with other land surface models, results are impacted by decoupling of transpiration and photosynthesis fluxes under drying soil conditions, often leading to implausibly high water use efficiencies. Here, we present a solution to this problem, ensuring that modelled transpiration is always consistent with modelled photosynthesis, while introducing a parsimonious single-parameter drought response function which is coupled to root water uptake. We further improve CABLE's simulation of coupled soil-canopy processes by introducing an alternative hydrology model with a physically accurate representation of coupled energy and water fluxes at the soil-air interface, including a more realistic formulation of transfer under atmospherically stable conditions within the canopy and in the presence of leaf litter. The effects of these model developments are assessed using data from 18 stations from the global eddy covariance FLUXNET database, selected to span a large climatic range. Marked improvements are demonstrated, with root mean squared errors for monthly latent heat fluxes and water use efficiencies being reduced by 40 %. Results highlight the important roles of deep soil moisture in mediating drought response and litter in dampening soil evaporation.

Optimal control solutions to sodic soil reclamation

NASA Astrophysics Data System (ADS)

Mau, Yair; Porporato, Amilcare

2016-05-01

We study the reclamation process of a sodic soil by irrigation with water amended with calcium cations. In order to explore the entire range of time-dependent strategies, this task is framed as an optimal control problem, where the amendment rate is the control and the total rehabilitation time is the quantity to be minimized. We use a minimalist model of vertically averaged soil salinity and sodicity, in which the main feedback controlling the dynamics is the nonlinear coupling of soil water and exchange complex, given by the Gapon equation. We show that the optimal solution is a bang-bang control strategy, where the amendment rate is discontinuously switched along the process from a maximum value to zero. The solution enables a reduction in remediation time of about 50%, compared with the continuous use of good-quality irrigation water. Because of its general structure, the bang-bang solution is also shown to work for the reclamation of other soil conditions, such as saline-sodic soils. The novelty in our modeling approach is the capability of searching the entire "strategy space" for optimal time-dependent protocols. The optimal solutions found for the minimalist model can be then fine-tuned by experiments and numerical simulations, applicable to realistic conditions that include spatial variability and heterogeneities.

PALADYN v1.0, a comprehensive land surface-vegetation-carbon cycle model of intermediate complexity

NASA Astrophysics Data System (ADS)

Willeit, Matteo; Ganopolski, Andrey

2016-10-01

PALADYN is presented; it is a new comprehensive and computationally efficient land surface-vegetation-carbon cycle model designed to be used in Earth system models of intermediate complexity for long-term simulations and paleoclimate studies. The model treats in a consistent manner the interaction between atmosphere, terrestrial vegetation and soil through the fluxes of energy, water and carbon. Energy, water and carbon are conserved. PALADYN explicitly treats permafrost, both in physical processes and as an important carbon pool. It distinguishes nine surface types: five different vegetation types, bare soil, land ice, lake and ocean shelf. Including the ocean shelf allows the treatment of continuous changes in sea level and shelf area associated with glacial cycles. Over each surface type, the model solves the surface energy balance and computes the fluxes of sensible, latent and ground heat and upward shortwave and longwave radiation. The model includes a single snow layer. Vegetation and bare soil share a single soil column. The soil is vertically discretized into five layers where prognostic equations for temperature, water and carbon are consistently solved. Phase changes of water in the soil are explicitly considered. A surface hydrology module computes precipitation interception by vegetation, surface runoff and soil infiltration. The soil water equation is based on Darcy's law. Given soil water content, the wetland fraction is computed based on a topographic index. The temperature profile is also computed in the upper part of ice sheets and in the ocean shelf soil. Photosynthesis is computed using a light use efficiency model. Carbon assimilation by vegetation is coupled to the transpiration of water through stomatal conductance. PALADYN includes a dynamic vegetation module with five plant functional types competing for the grid cell share with their respective net primary productivity. PALADYN distinguishes between mineral soil carbon, peat carbon, buried carbon and shelf carbon. Each soil carbon type has its own soil carbon pools generally represented by a litter, a fast and a slow carbon pool in each soil layer. Carbon can be redistributed between the layers by vertical diffusion and advection. For the vegetated macro surface type, decomposition is a function of soil temperature and soil moisture. Carbon in permanently frozen layers is assigned a long turnover time which effectively locks carbon in permafrost. Carbon buried below ice sheets and on flooded ocean shelves is treated differently. The model also includes a dynamic peat module. PALADYN includes carbon isotopes 13C and 14C, which are tracked through all carbon pools. Isotopic discrimination is modelled only during photosynthesis. A simple methane module is implemented to represent methane emissions from anaerobic carbon decomposition in wetlands (including peatlands) and flooded ocean shelf. The model description is accompanied by a thorough model evaluation in offline mode for the present day and the historical period.

Pesticide uptake in potatoes: model and field experiments.

PubMed

Juraske, Ronnie; Vivas, Carmen S Mosquera; Velásquez, Alexander Erazo; Santos, Glenda García; Moreno, Mónica B Berdugo; Gomez, Jaime Diaz; Binder, Claudia R; Hellweg, Stefanie; Dallos, Jairo A Guerrero

2011-01-15

A dynamic model for uptake of pesticides in potatoes is presented and evaluated with measurements performed within a field trial in the region of Boyacá, Colombia. The model takes into account the time between pesticide applications and harvest, the time between harvest and consumption, the amount of spray deposition on soil surface, mobility and degradation of pesticide in soil, diffusive uptake and persistence due to crop growth and metabolism in plant material, and loss due to food processing. Food processing steps included were cleaning, washing, storing, and cooking. Pesticide concentrations were measured periodically in soil and potato samples from the beginning of tuber formation until harvest. The model was able to predict the magnitude and temporal profile of the experimentally derived pesticide concentrations well, with all measurements falling within the 90% confidence interval. The fraction of chlorpyrifos applied on the field during plant cultivation that eventually is ingested by the consumer is on average 10(-4)-10(-7), depending on the time between pesticide application and ingestion and the processing step considered.

Factors influencing the rates, processes and magnitude of accumulation of carbon in desert soils

NASA Technical Reports Server (NTRS)

Mcfadden, Leslie D.

1994-01-01

This report summarizes research funded through NASA's Soil Landscape Climate Program which includes studies of the systematics of carbon storage and flux in the terrestrial environment, specifically terrestrial soils. Efforts focussed on the nature of carbon behavior in arid environments, where the majority of the carbon is present as inorganic carbon stored as pedogenic carbonate in desert calcic soils. Studies were supported of soils in two areas of western North America's major deserts: the Mojave Desert and the Chihuahuan Desert. Part 1 of this report summarizes the results of research conducted in the area of the Providence Mountains, California in the eastern Mojave Desert. Part 2 of this report summarizes the results of research in the Sevilleta Wildlife Refuge in central New Mexico, one of the sites of the UMN Biology Department's Long Term Ecological Research.

Reductive solubilization of arsenic in a mining-impacted river floodplain: Influence of soil properties and temperature.

PubMed

Simmler, Michael; Bommer, Jérôme; Frischknecht, Sarah; Christl, Iso; Kotsev, Tsvetan; Kretzschmar, Ruben

2017-12-01

Mining activities have contaminated many riverine floodplains with arsenic (As). When floodplain soils become anoxic under water-saturated conditions, As can be released from the solid phase. Several microbially-driven As solubilization processes and numerous influential factors were recognized in the past. However, the interplay and relative importance of soil properties and the influence of environmental factors such as temperature remain poorly understood, especially considering the (co)variation of soil properties in a floodplain. We conducted anoxic microcosm experiments at 10, 17.5, and 25 °C using 65 representative soils from the mining-impacted Ogosta River floodplain in Bulgaria. To investigate the processes of As solubilization and its quantitative variation we followed the As and Fe redox dynamics in the solid and the dissolved phase and monitored a range of other solution parameters including pH, Eh, dissolved organic C, and dissolved Mn. We related soil properties to dissolved As observed after 20 days of microcosm incubation to identify key soil properties for As solubilization. Our results evidenced reductive dissolution of As-bearing Fe(III)-oxyhydroxides as the main cause for high solubilization. The availability of nutrients, most likely organic C as the source of energy for microorganisms, was found to limit this process. Following the vertical nutrient gradient common in vegetated soil, we observed several hundred μM dissolved As after 1-2 weeks for some topsoils (0-20 cm), while for subsoils (20-40 cm) with comparable total As levels only minor solubilization was observed. While high Mn contents were found to inhibit As solubilization, the opposite applied for higher temperature (Q 10 2.3-6.1 for range 10-25 °C). Our results suggest that flooding of nutrient-rich surface layers might be more problematic than water-saturation of nutrient-poor subsoil layers, especially in summer floodings when soil temperature is higher than in winter or spring. Copyright © 2017 Elsevier Ltd. All rights reserved.

High resolution change estimation of soil moisture and its assimilation into a land surface model

NASA Astrophysics Data System (ADS)

Narayan, Ujjwal

Near surface soil moisture plays an important role in hydrological processes including infiltration, evapotranspiration and runoff. These processes depend non-linearly on soil moisture and hence sub-pixel scale soil moisture variability characterization is important for accurate modeling of water and energy fluxes at the pixel scale. Microwave remote sensing has evolved as an attractive technique for global monitoring of near surface soil moisture. A radiative transfer model has been tested and validated for soil moisture retrieval from passive microwave remote sensing data under a full range of vegetation water content conditions. It was demonstrated that soil moisture retrieval errors of approximately 0.04 g/g gravimetric soil moisture are attainable with vegetation water content as high as 5 kg/m2. Recognizing the limitation of low spatial resolution associated with passive sensors, an algorithm that uses low resolution passive microwave (radiometer) and high resolution active microwave (radar) data to estimate soil moisture change at the spatial resolution of radar operation has been developed and applied to coincident Passive and Active L and S band (PALS) and Airborne Synthetic Aperture Radar (AIRSAR) datasets acquired during the Soil Moisture Experiments in 2002 (SMEX02) campaign with root mean square error of 10% and a 4 times enhancement in spatial resolution. The change estimation algorithm has also been used to estimate soil moisture change at 5 km resolution using AMSR-E soil moisture product (50 km) in conjunction with the TRMM-PR data (5 km) for a 3 month period demonstrating the possibility of high resolution soil moisture change estimation using satellite based data. Soil moisture change is closely related to precipitation and soil hydraulic properties. A simple assimilation framework has been implemented to investigate whether assimilation of surface layer soil moisture change observations into a hydrologic model will potentially improve it performance. Results indicate an improvement in model prediction of near surface and deep layer soil moisture content when the update is performed to the model state as compared to free model runs. It is also seen that soil moisture change assimilation is able to mitigate the effect of erroneous precipitation input data.

The distribution of soil phosphorus for global biogeochemical modeling

DOE PAGES

Yang, Xiaojuan; Post, Wilfred M.; Thornton, Peter E.; ...

2013-04-16

We discuss that phosphorus (P) is a major element required for biological activity in terrestrial ecosystems. Although the total P content in most soils can be large, only a small fraction is available or in an organic form for biological utilization because it is bound either in incompletely weathered mineral particles, adsorbed on mineral surfaces, or, over the time of soil formation, made unavailable by secondary mineral formation (occluded). In order to adequately represent phosphorus availability in global biogeochemistry–climate models, a representation of the amount and form of P in soils globally is required. We develop an approach that buildsmore » on existing knowledge of soil P processes and databases of parent material and soil P measurements to provide spatially explicit estimates of different forms of naturally occurring soil P on the global scale. We assembled data on the various forms of phosphorus in soils globally, chronosequence information, and several global spatial databases to develop a map of total soil P and the distribution among mineral bound, labile, organic, occluded, and secondary P forms in soils globally. The amount of P, to 50cm soil depth, in soil labile, organic, occluded, and secondary pools is 3.6 ± 3, 8.6 ± 6, 12.2 ± 8, and 3.2 ± 2 Pg P (Petagrams of P, 1 Pg = 1 × 10 15g) respectively. The amount in soil mineral particles to the same depth is estimated at 13.0 ± 8 Pg P for a global soil total of 40.6 ± 18 Pg P. The large uncertainty in our estimates reflects our limited understanding of the processes controlling soil P transformations during pedogenesis and a deficiency in the number of soil P measurements. In spite of the large uncertainty, the estimated global spatial variation and distribution of different soil P forms presented in this study will be useful for global biogeochemistry models that include P as a limiting element in biological production by providing initial estimates of the available soil P for plant uptake and microbial utilization.« less

The International year of soils: thoughts on future directions for experiments in soil erosion research

NASA Astrophysics Data System (ADS)

Kuhn, Nikolaus J.

2015-04-01

The 2015 UN Year of Soils (IYS), implemented by the FAO, aims to increase awareness and understanding of the importance of soil for food security and essential ecosystem functions. The IYS has six specific objectives, ranging from raising the awareness among civil society and decision makers about the profound importance of soils, to the development of policies supporting the sustainable use of the non-renewable soil resource. For scientists and academic teachers using experiments to study soil erosion processes, two objectives appear of particular relevance. First is need for the rapid capacity enhancement for soil information collection and monitoring at all levels (global, regional and national). While at first glance, this objective appears to relate mostly to traditional mapping, sampling and monitoring, the threat of large-scale soil loss, at least with regards to their ecosystem services, illustrates the need for approaches of studying soils that avoids such irreversible destruction. Relying on often limited data and their extrapolation does not cover this need for soil information because rapid change of the drivers of change itself carry the risk of unprecedented soil reactions not covered by existing data sets. Experiments, on the other hand, offer the possibility to simulate and analyze future soil change in great detail. Furthermore, carefully designed experiments may also limit the actual effort involved in collecting the specific required information, e.g. by applying tests designed to study soil system behavior under controlled conditions, compared to field monitoring. For rainfall simulation, experiments should therefore involve the detailed study of erosion processes and include detailed recording and reporting of soil and rainfall properties. The development of a set of standardised rainfall simulations would widen the use data collected by such experiments. A second major area for rainfall simulation lies in the the education of the public about the crucial role soil plays in food security, climate change adaptation and mitigation, essential ecosystem services, poverty alleviation and sustainable development. While erosion monitoring and modeling, as well as erosion risk assessment maps provide a solid foundation for decision makers, the attention of the public for "dirt" is often much easier to achieve by setting up a rainfall simulation experiment that illustrates the connection between a process, such as rainfall and runoff observed in daily life, and its causes and consequences. Exploring the potential of rainfall simulation experiments as an outreach tool should therefore be part of the soil science, geomorphology and hydrology community during the IYS 2015 and beyond.

Technology-Driven and Innovative Training for Sustainable Agriculture in The Face of Climate Change

NASA Astrophysics Data System (ADS)

Wishart, D. N.

2015-12-01

Innovative training in 'Sustainable Agriculture' for an increasingly STEM-dependent agricultural sector will require a combination of approaches and technologies for global agricultural production to increase while offsetting climate change. Climate change impacts the water resources of nations as normal global weather patterns are altered during El Nino events. Agricultural curricula must incorporate awareness of 'climate change' in order to find novel ways to (1) assure global food security; (2) improve soil productivity and conservation; (3) improve crop yields and irrigation; (4) inexpensively develop site specific principles of crop management based on variable soil and associated hydrological properties; and (5) improve precision farming. In February 2015, Central State University (CSU), Ohio became an 1890 Land-Grant institution vital to the sustainability of Ohio's agricultural sector. Besides agricultural extension, the agriculture curriculum at CSU integrates multidisciplinary courses in science, technology engineering, agriculture, and mathematics (STEAM). The agriculture program could benefit from a technology-driven, interdisciplinary soil science course that promotes climate change education and climate literacy while being offered in both a blended and collaborative learning environment. The course will focus on the dynamics of microscale to mesoscale processes occurring in farming systems, those of which impact climate change or could be impacted by climate change. Elements of this course will include: climate change webinars; soil-climate interactions; carbon cycling; the balance of carbon fluxes between soil storage and atmosphere; microorganisms and soil carbon storage; paleoclimate and soil forming processes; geophysical techniques used in the characterization of soil horizons; impact of climate change on soil fertility; experiments; and demonstrations.

Short and Long-Term Soil Moisture Effects of Liana Removal in a Seasonally Moist Tropical Forest

PubMed Central

Reid, Joseph Pignatello; Schnitzer, Stefan A.; Powers, Jennifer S.

2015-01-01

Lianas (woody vines) are particularly abundant in tropical forests, and their abundance is increasing in the neotropics. Lianas can compete intensely with trees for above- and belowground resources, including water. As tropical forests experience longer and more intense dry seasons, competition for water is likely to intensify. However, we lack an understanding of how liana abundance affects soil moisture and hence competition with trees for water in tropical forests. To address this critical knowledge gap, we conducted a large-scale liana removal experiment in a seasonal tropical moist forest in central Panama. We monitored shallow and deep soil moisture over the course of three years to assess the effects of lianas in eight 0.64 ha removal plots and eight control plots. Liana removal caused short-term effects in surface soils. Surface soils (10 cm depth) in removal plots dried more slowly during dry periods and accumulated water more slowly after rainfall events. These effects disappeared within four months of the removal treatment. In deeper soils (40 cm depth), liana removal resulted in a multi-year trend towards 5–25% higher soil moisture during the dry seasons with the largest significant effects occurring in the dry season of the third year following treatment. Liana removal did not affect surface soil temperature. Multiple and mutually occurring mechanisms may be responsible for the effects of liana removal on soil moisture, including competition with trees, and altered microclimate, and soil structure. These results indicate that lianas influence hydrologic processes, which may affect tree community dynamics and forest carbon cycling. PMID:26545205

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dorfman, D.

Earthworms can live in soils containing high quantities of mercury, lead, and zinc. The worms (Lumbricus terrestris) concentrate these heavy metals in their tissues. The use of these worms to reduce the quantities of mercury and other heavy metals in soils may be practical. In July, 1993, a preliminary study was made using earthworms and soils with differing amounts of mercury, The quantities were 0.0 grams, 0.5 grams, and 1.0 grams of mercury as mercuric chloride. Earthworms were placed into these soils for two or more weeks, then harvested. The worms were rinsed with deionized water, then dissolved in nitricmore » acid. Each sample was prepared for analysis with the addition of HNO{sub 3}, H{sub 2}SO{sub 4}, potassium permanganate, and hydrozylamine hydrochloride. A Jerome Instrument gold foil analyzer was used to determine levels of mercury after volatilizing the sample with stannous chloride. Worms exposed to contaminated soils remove 50 to 1,400 times as much mercury as do worms in control soils. In a hypothetical case, a site contaminated with one pound of mercury, 1,000 to 45,000 worms would be required to reduce mercury levels to background levels in the soil (about 250 ppb). After harvesting worms in contaminated soil they could be dried (90% of their weight is water), and the mercury regained by chemical processes. Soil conducive to earthworm survival is required. This includes a well aerated loamy soil, proper pH (7.0), and periodic watering and feeding. There are several methods of harvesting worms, including flooding and electricity. Large numbers of worms can be obtained from commercial growers.« less

Biological Remediation of Petroleum Contaminants

NASA Astrophysics Data System (ADS)

Kuhad, Ramesh Chander; Gupta, Rishi

Large volumes of hazardous wastes are generated in the form of oily sludges and contaminated soils during crude oil transportation and processing. Although many physical, chemical and biological treatment technologies are available for petroleum contaminants petroleum contaminants in soil, biological methods have been considered the most cost-effective. Practical biological remediation methods typically involve direct use of the microbes naturally occurring in the contaminated environment and/or cultured indigenous or modified microorganisms. Environmental and nutritional factors, including the properties of the soil, the chemical structure of the hydrocarbon(s), oxygen, water, nutrient availability, pH, temperature, and contaminant bioavailability, can significantly affect the rate and the extent of hydrocarbon biodegradation hydrocarbon biodegradation by microorganisms in contaminated soils. This chapter concisely discusses the major aspects of bioremediation of petroleum contaminants.

Bioavailability of butachlor and myclobutanil residues in soil to earthworms.

PubMed

Yu, Y L; Wu, X M; Li, S N; Fang, H; Tan, Y J; Yu, J Q

2005-05-01

To establish chemical extraction procedures for predicting bioavailability of butachlor and myclobutanil in soil, several solvent systems, including methanol, methanol-water (9:1), methanol-water (1:1), acetone-water (5:3), petroleum ether and water, were assessed for their feasibility in determining extractability of the target compounds from soil samples. Experimental data showed that the extractability of butachlor and myclobutanil by the solvents was well linearly correlated with their bioavailability to Eisenia foetida and Allolobophora caliginosa, indicating that these extraction procedures may be efficient for predicting bioavailability of the two pesticides. The concentrations of the pesticides accumulated in E. foetida and A. caliginosa varied with species, suggesting that the availability of the soil-sequestered pesticide is a species-dependent process.

Importance of Soil Temperature for the Growth of Temperate Crops under a Tropical Climate and Functional Role of Soil Microbial Diversity.

PubMed

Sabri, Nurul Syazwani Ahmad; Zakaria, Zuriati; Mohamad, Shaza Eva; Jaafar, A Bakar; Hara, Hirofumi

2018-04-28

A soil cooling system that prepares soil for temperate soil temperatures for the growth of temperate crops under a tropical climate is described herein. Temperate agriculture has been threatened by the negative impact of temperature increases caused by climate change. Soil temperature closely correlates with the growth of temperate crops, and affects plant processes and soil microbial diversity. The present study focuses on the effects of soil temperatures on lettuce growth and soil microbial diversity that maintains the growth of lettuce at low soil temperatures. A model temperate crop, loose leaf lettuce, was grown on eutrophic soil under soil cooling and a number of parameters, such as fresh weight, height, the number of leaves, and root length, were evaluated upon harvest. Under soil cooling, significant differences were observed in the average fresh weight (P<0.05) and positive development of the roots, shoots, and leaves of lettuce. Janthinobacterium (8.142%), Rhodoplanes (1.991%), Arthrospira (1.138%), Flavobacterium (0.857%), Sphingomonas (0.790%), Mycoplana (0.726%), and Pseudomonas (0.688%) were the dominant bacterial genera present in cooled soil. Key soil fungal communities, including Pseudaleuria (18.307%), Phoma (9.968%), Eocronartium (3.527%), Trichosporon (1.791%), and Pyrenochaeta (0.171%), were also recovered from cooled soil. The present results demonstrate that the growth of temperate crops is dependent on soil temperature, which subsequently affects the abundance and diversity of soil microbial communities that maintain the growth of temperate crops at low soil temperatures.

Modeling soil respiration and variations of source components using a multi-factor global climate change experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chen, Xiongwen; Post, Wilfred M; Norby, Richard J

2011-01-01

Soil respiration is an important component of the global carbon cycle and is highly responsive to changes in soil temperature and moisture. Accurate prediction of soil respiration and its changes under future climatic conditions requires a clear understanding of the processes involved. In spite of this, most current empirical soil respiration models incorporate just few of the underlying mechanisms that may influence its response. In this study, a new partial process-based component model built on source components of soil respiration was tested using data collected from a multi-factor climate change experiment that manipulates CO2 concentrations, temperature and precipitation. These resultsmore » were then compared to results generated using several other established models. The component model we tested performed well across different treatments of global climate change. In contrast, some other models, which worked well predicting ambient environmental conditions, were unable to predict the changes under different climate change treatments. Based on the component model, the relative proportions of heterotrophic respiration (Rh) in the total soil respiration at different treatments varied from 0.33 to 0.85. There is a significant increase in the proportion of Rh under the elevated atmospheric CO2 concentration in comparison ambient conditions. The dry treatment resulted in higher proportion of Rh at elevated CO2 and ambient T than under elevated CO2 and elevated T. Also, the ratios between root growth and root maintenance respiration varied across different treatments. Neither increased temperature nor elevated atmospheric CO2 changed Q10 values significantly, while the average Q10 value at wet sites was significantly higher than it at dry sites. There was a higher possibility of increased soil respiration under drying relative to wetting conditions across all treatments based on monthly data, indicating that soil respiration may also be related to soil moisture at previous time periods. Our results reveal that the extent, time delay and contribution of different source components need to be included into mechanistic/processes-based soil respiration models at corresponding scale.« less

Hill slope and erosional controls on soil organic geochemistry in intensely managed landscapes

NASA Astrophysics Data System (ADS)

Filley, T. R.; Hou, T.; Hughes, M.; Tong, Y.; Papanicolaou, T.; Wacha, K.; Abban, B. K.; Boys, J.; Wilson, C. G.

2015-12-01

Like many regions of North America, the last 100 years of agriculture in the glaciated upper Midwest has lead to a major redistribution of soil carbon and nitrogen on the landscape. Through the natural coevolution of geomorphic, pedogenic, and ecological processes in the critical zone or by punctual changes in these processes as a result of intensive management, landscapes established characteristic hierarchies of physicochemical controls on organic matter stability. In the Intensively-Managed Landscapes - Critical Zone Observatory (IML-CZO) in Iowa and Illinois these processes are being studied with a combination of surface soil geochemical surveys and simulated rainfall/erosion experiments to document how the organic geochemistry of hill slopes, under land management ranging from row crop to restored prairie, are currently evolving, and how they evolved during early management and pre settlement. Using a combination of soil analyses including elemental, stable isotope, textural, and soil biopolymers (lignin and cutin/suberin fatty acids (SFA)) we investigated the spatial patterns of static surface soil properties and time course rainfall-erosional experiments along the same slopes to gain insight into soil carbon and biopolymer enrichment patterns in east-central Iowa within the Clear Creek Watershed. Both lignin and substituted fatty acid concentration and their molecular ratios highlighted differences in C3/C4 (soy/corn) management activities in surface soils while over 40 years of prairie restoration dramatically altered surface soil profiles. For example, a general pattern in static baseline samples was an enrichment of 15N in soils down slope and an opposite pattern of accumulation/loss of lignin and SFA in topographic highs and lows. Transport of soil particles, associated biopolymers, and elemental and isotope signatures, exhibited distinct patterns based upon both position of the hill slope and directionality of flow with respect to rill/gully direction created by tillage activity. This indicates that particle/chemistry transport and enrichment of organic chemical signatures down slope and into associated flood plains and streams in modern intensively managed systems should be distinct from pre-settlement patterns and help interpret pre- and post settlement alluvium sediment.

Hydrologically transported dissolved organic carbon influences soil respiration in a tropical rainforest

NASA Astrophysics Data System (ADS)

Zhou, Wen-Jun; Lu, Hua-Zheng; Zhang, Yi-Ping; Sha, Li-Qing; Schaefer, Douglas Allen; Song, Qing-Hai; Deng, Yun; Deng, Xiao-Bao

2016-10-01

To better understand the effect of dissolved organic carbon (DOC) transported by hydrological processes (rainfall, throughfall, litter leachate, and surface soil water; 0-20 cm) on soil respiration in tropical rainforests, we detected the DOC flux in rainfall, throughfall, litter leachate, and surface soil water (0-20 cm), compared the seasonality of δ13CDOC in each hydrological process, and δ13C in leaves, litter, and surface soil, and analysed the throughfall, litter leachate, and surface soil water (0-20 cm) effect on soil respiration in a tropical rainforest in Xishuangbanna, south-west China. Results showed that the surface soil intercepted 94.4 ± 1.2 % of the annual litter leachate DOC flux and is a sink for DOC. The throughfall and litter leachate DOC fluxes amounted to 6.81 and 7.23 % of the net ecosystem exchange respectively, indicating that the DOC flux through hydrological processes is an important component of the carbon budget, and may be an important link between hydrological processes and soil respiration in a tropical rainforest. Even the variability in soil respiration is more dependent on the hydrologically transported water than DOC flux insignificantly, soil temperature, and soil-water content (at 0-20 cm). The difference in δ13C between the soil, soil water (at 0-20 cm), throughfall, and litter leachate indicated that DOC is transformed in the surface soil and decreased the sensitivity indices of soil respiration of DOC flux to water flux, which suggests that soil respiration is more sensitive to the DOC flux in hydrological processes, especially the soil-water DOC flux, than to soil temperature or soil moisture.

Soil processes at Emerald Lake Watershed. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lund, L.J.; Brown, A.D.; Lueking, M.A.

1987-04-20

The objectives of the Soils Processes research at Emerald Lake Watershed (ELW) were to assess physical, chemical and biological processes contributing to the production or consumption of acidity in soils and to assess the net effect of soil processes on surface-water quality in an alpine watershed. Most of the N and S in ELW soils is stored in organic forms. Most of the soil P is present in nearly insoluble mineral forms. The ELW soils can adsorb only small quantities of sulfate, thus their capacity for buffering acid additions by sulfate adsorption is low. Concentrations of Al, Ca, Mg, K,more » and Na in both soil solution and stream samples reflected patterns of mineral weathering in the watershed. Summer CO/sub 2/ concentrations in the soils were high enough to increase soil solution acidity and influence the speciation of dissolved elements. The overall chemistry of stream waters reflects the mineral composition of soils and rocks at ELW.« less

Response of Carbon Fluxes to Soil Moisture Variability across an Alaskan Tundra Landscape

NASA Astrophysics Data System (ADS)

Melton, S.; Natali, S.; Schade, J. D.; Holmes, R. M.; Mann, P. J.; Fiske, G. J.

2017-12-01

Soils in arctic and sub-arctic permafrost regions store large amounts of carbon (C), which is becoming more biologically available as soils warm and permafrost thaws. Microbial decay of organic forms of C can result in the production and emission of carbon dioxide (CO2) and methane (CH4), and the amount and form of C released into the atmosphere depend on organic matter composition and soil conditions. Soil moisture, which is a strong driver of microbial processes, varies spatially and temporally across tundra landscapes and may change dramatically as a result of permafrost thaw. The Yukon-Kuskokwim Delta (YKD) of Alaska is underlain by discontinuous permafrost and is particularly vulnerable to permafrost thaw and soil moisture changes associated with thaw. As permafrost thaws, some areas may dry as drainage increases with increasing thaw depth. Alternatively, permafrost thaw may lead to ground subsidence and saturation of previously dry soils. Our objective was to investigate patterns in C storage and processing across the landscape and in response to changes in soil moisture in the YKD. We analyzed soil C pools (0-30 cm) and CO2 and CH4 concentrations in soils from sites of different land cover and landscape position, including moist and dry peat plateaus, high and low intensity burned plateaus, fens, and drained lakes. We also conducted aerobic and anaerobic soil incubations to determine changes in CO2 and CH4 production under a range of soil moisture conditions. Soils from burned plateaus, which were drier and had lower C content than unburned soils, had higher CO2 production (per g soil) than unburned soils during aerobic incubations. Both increased and decreased moisture reduced CO2 production from soils. Soil drying increased net CH4 uptake in all aerobically-incubated burned soils, and wetting resulted in CH4 emissions from low intensity burn soils. CO2 and CH4 production from fen soils were higher than from the other landscape positions analyzed here. Our results suggest that soil drying could lead to decreased microbial respiration, whereas subsidence may result in increased methanogenesis. Additionally, amplified CH4 release from burned soils after rainfall events or subsidence may accompany the increased fire frequency projected in tundra regions.

Impacts of fire on nitrogen cycling in aquatic and terrestrial ecosystems in the Yukon-Kuskokwim River Delta, AK

NASA Astrophysics Data System (ADS)

Schade, J. D.; Jardine, L. E.; Bristol, E. M.; Navarro-Perez, E.; Melton, S.; Jimmie, J. A.; Natali, S.; Mann, P. J.; Holmes, R. M.

2016-12-01

Global climate change is having a disproportionate impact on northern high latitudes, including rapid increases in temperature, changes in precipitation, and increasing fire frequency and severity. Wildfires have been shown to strongly influence ecosystem processes through acceleration of permafrost thaw and increased nitrogen (N) availability, the effects of which may increase gaseous loss of carbon (C) to the atmosphere, increase primary production by alleviating N limitation, or both. The extent of these fire impacts has not been well-documented in the Arctic, particularly in areas of discontinuous permafrost. In 2015, the Yukon-Kuskokwim River Delta (YK Delta) in southwestern Alaska experienced the largest fire season in recorded history, providing an opportunity to study wildfire impacts on an area particularly vulnerable to permafrost thaw. Our objectives were to study the impacts of these fires on nitrogen availability in a range of land cover classes, including peat plateaus, channel fens, and aquatic ecosystems distributed across the landscapes. We sampled soils from several vegetation patches on burned and unburned peat plateaus, and soil and surface waters from fens, small ponds, and streams downslope of these sites. All water samples were filtered through GFF filters in the field. Soils were transported frozen to the Woods Hole Research Center and extracted in KCl. All water samples and extracts were analyzed for NH4 and NO3 concentrations. We found substantially higher concentrations of extractable NH4 in burned soils, but very little extractable NO3 in either burned or unburned soils. Water samples also showed higher NH4 in aquatic ecosystems in burned watersheds, but, in contrast to soils, showed relatively high NO3 concentrations, particularly in waters from lower landscape positions. Overall, aquatic ecosystems exhibited higher NO3: NH4 ratios than soil extractions, and increasing NO3: NH4 downslope. These results suggest significant export of nitrogen after fire and the potential for nitrification as N is transported across the landscape. These changes in N cycling are likely to have substantial consequences for the recovery of plant communities post-fire and for microbial processes and greenhouse gas fluxes, including N2O, from burned watersheds.

Impacts of fire on nitrogen cycling in aquatic and terrestrial ecosystems in the Yukon-Kuskokwim River Delta, AK

NASA Astrophysics Data System (ADS)

Schade, J. D.; Jardine, L. E.; Bristol, E. M.; Navarro-Perez, E.; Melton, S.; Jimmie, J. A.; Natali, S.; Mann, P. J.; Holmes, R. M.

2017-12-01

Global climate change is having a disproportionate impact on northern high latitudes, including rapid increases in temperature, changes in precipitation, and increasing fire frequency and severity. Wildfires have been shown to strongly influence ecosystem processes through acceleration of permafrost thaw and increased nitrogen (N) availability, the effects of which may increase gaseous loss of carbon (C) to the atmosphere, increase primary production by alleviating N limitation, or both. The extent of these fire impacts has not been well-documented in the Arctic, particularly in areas of discontinuous permafrost. In 2015, the Yukon-Kuskokwim River Delta (YK Delta) in southwestern Alaska experienced the largest fire season in recorded history, providing an opportunity to study wildfire impacts on an area particularly vulnerable to permafrost thaw. Our objectives were to study the impacts of these fires on nitrogen availability in a range of land cover classes, including peat plateaus, channel fens, and aquatic ecosystems distributed across the landscapes. We sampled soils from several vegetation patches on burned and unburned peat plateaus, and soil and surface waters from fens, small ponds, and streams downslope of these sites. All water samples were filtered through GFF filters in the field. Soils were transported frozen to the Woods Hole Research Center and extracted in KCl. All water samples and extracts were analyzed for NH4 and NO3 concentrations. We found substantially higher concentrations of extractable NH4 in burned soils, but very little extractable NO3 in either burned or unburned soils. Water samples also showed higher NH4 in aquatic ecosystems in burned watersheds, but, in contrast to soils, showed relatively high NO3 concentrations, particularly in waters from lower landscape positions. Overall, aquatic ecosystems exhibited higher NO3: NH4 ratios than soil extractions, and increasing NO3: NH4 downslope. These results suggest significant export of nitrogen after fire and the potential for nitrification as N is transported across the landscape. These changes in N cycling are likely to have substantial consequences for the recovery of plant communities post-fire and for microbial processes and greenhouse gas fluxes, including N2O, from burned watersheds.

Moisture can be the dominant environmental parameter governing cadaver decomposition in soil.

PubMed

Carter, David O; Yellowlees, David; Tibbett, Mark

2010-07-15

Forensic taphonomy involves the use of decomposition to estimate postmortem interval (PMI) or locate clandestine graves. Yet, cadaver decomposition remains poorly understood, particularly following burial in soil. Presently, we do not know how most edaphic and environmental parameters, including soil moisture, influence the breakdown of cadavers following burial and alter the processes that are used to estimate PMI and locate clandestine graves. To address this, we buried juvenile rat (Rattus rattus) cadavers (approximately 18 g wet weight) in three contrasting soils from tropical savanna ecosystems located in Pallarenda (sand), Wambiana (medium clay), or Yabulu (loamy sand), Queensland, Australia. These soils were sieved (2mm), weighed (500 g dry weight), calibrated to a matric potential of -0.01 megapascals (MPa), -0.05 MPa, or -0.3 MPa (wettest to driest) and incubated at 22 degrees C. Measurements of cadaver decomposition included cadaver mass loss, carbon dioxide-carbon (CO(2)-C) evolution, microbial biomass carbon (MBC), protease activity, phosphodiesterase activity, ninhydrin-reactive nitrogen (NRN) and soil pH. Cadaver burial resulted in a significant increase in CO(2)-C evolution, MBC, enzyme activities, NRN and soil pH. Cadaver decomposition in loamy sand and sandy soil was greater at lower matric potentials (wetter soil). However, optimal matric potential for cadaver decomposition in medium clay was exceeded, which resulted in a slower rate of cadaver decomposition in the wettest soil. Slower cadaver decomposition was also observed at high matric potential (-0.3 MPa). Furthermore, wet sandy soil was associated with greater cadaver decomposition than wet fine-textured soil. We conclude that gravesoil moisture content can modify the relationship between temperature and cadaver decomposition and that soil microorganisms can play a significant role in cadaver breakdown. We also conclude that soil NRN is a more reliable indicator of gravesoil than soil pH. (c) 2010 Elsevier Ireland Ltd. All rights reserved.

Shallow soil moisture - ground thaw interactions and controls - Part 2: Influences of water and energy fluxes

NASA Astrophysics Data System (ADS)

Guan, X. J.; Spence, C.; Westbrook, C. J.

2010-01-01

The companion paper (Guan et al., 2010) demonstrated variable interactions and correlations between shallow soil moisture and ground thaw in soil filled areas along a wetness spectrum in a subarctic Canadian Precambrian Shield landscape. From wetter to drier, these included a wetland, peatland and soil filled valley. Herein, water and energy fluxes were examined for these same subarctic study sites to discern the key controlling processes on the found patterns. Results showed the key control in variable soil moisture and frost table interactions among the sites was the presence of surface water. At the peatland and wetland sites, accumulated water in depressions and flow paths maintained soil moisture for a longer duration than at the hummock tops. These wet areas were often locations of deepest thaw depth due to the transfer of latent heat accompanying lateral surface runoff. Although the peatland and wetland sites had large inundation extent, modified Péclet numbers indicated the relative influence of external and internal hydrological processes at each site were different. Continuous inflow from an upstream lake into the wetland site caused advective and conductive thermal energies to be of equal importance to conductive ground thaw. The absence of continuous surface flow at the peatland and valley sites led to dominance of conductive thermal energy over advective energy for ground thaw. The results suggest that the modified Péclet number could be a very useful parameter to differentiate landscape components in modeling frost table heterogeneity. The calculated water and energy fluxes, and the modified Péclet number provide quantitative explanations for the shallow soil moisture-ground thaw patterns by linking them with hydrological processes and hillslope storage capacity.

Shallow soil moisture - ground thaw interactions and controls - Part 2: Influences of water and energy fluxes

NASA Astrophysics Data System (ADS)

Guan, X. J.; Spence, C.; Westbrook, C. J.

2010-07-01

The companion paper (Guan et al., 2010) demonstrated variable interactions and correlations between shallow soil moisture and ground thaw in soil filled areas along a wetness spectrum in a subarctic Canadian Precambrian Shield landscape. From wetter to drier, these included a wetland, peatland and soil filled valley. Herein, water and energy fluxes were examined for these same subarctic study sites to discern the key controlling processes on the found patterns. Results showed the presence of surface water was the key control in variable soil moisture and frost table interactions among sites. At the peatland and wetland sites, accumulated water in depressions and flow paths maintained soil moisture for a longer duration than at the hummock tops. These wet areas were often locations of deepest thaw depth due to the transfer of latent heat accompanying lateral surface runoff. Although the peatland and wetland sites had large inundation extent, modified Péclet numbers indicated the relative influence of external and internal hydrological and energy processes at each site were different. Continuous inflow from an upstream lake into the wetland site caused advective and conductive thermal energies to be of equal importance to ground thaw. The absence of continuous surface flow at the peatland and valley sites led to dominance of conductive thermal energy over advective energy for ground thaw. The results suggest that the modified Péclet number could be a very useful parameter to differentiate landscape components in modeling frost table heterogeneity. The calculated water and energy fluxes, and the modified Péclet number provide quantitative explanations for the shallow soil moisture-ground thaw patterns by linking them with hydrological processes and hillslope storage capacity.

High spatial variability in biogeochemical rates and microbial communities across Louisiana salt marsh landscapes

NASA Astrophysics Data System (ADS)

Roberts, B. J.; Chelsky, A.; Bernhard, A. E.; Giblin, A. E.

2017-12-01

Salt marshes are important sites for retention and transformation of carbon and nutrients. Much of our current marsh biogeochemistry knowledge is based on sampling at times and in locations that are convenient, most often vegetated marsh platforms during low tide. Wetland loss rates are high in many coastal regions including Louisiana which has the highest loss rates in the US. This loss not only reduces total marsh area but also changes the relative allocation of subhabitats in the remaining marsh. Climate and other anthropogenic changes lead to further changes including inundation patterns, redox conditions, salinity regimes, and shifts in vegetation patterns across marsh landscapes. We present results from a series of studies examining biogeochemical rates, microbial communities, and soil properties along multiple edge to interior transects within Spartina alterniflora across the Louisiana coast; between expanding patches of Avicennia germinans and adjacent S. alterniflora marshes; in soils associated with the four most common Louisiana salt marsh plants species; and across six different marsh subhabitats. Spartina alterniflora marsh biogeochemistry and microbial populations display high spatial variability related to variability in soil properties which appear to be, at least in part, regulated by differences in elevation, hydrology, and redox conditions. Differences in rates between soils associated with different vegetation types were also related to soil properties with S. alterniflora soils often yielding the lowest rates. Biogeochemical process rates vary significantly across marsh subhabitats with individual process rates differing in their hotspot habitat(s) across the marsh. Distinct spatial patterns may influence the roles that marshes play in retaining and transforming nutrients in coastal regions and highlight the importance of incorporating spatial sampling when scaling up plot level measurements to landscape or regional scales.

Ground penetrating radar for asparagus detection

NASA Astrophysics Data System (ADS)

Seyfried, Daniel; Schoebel, Joerg

2016-03-01

Ground penetrating radar is a promising technique for detection of buried objects. Recently, radar has more and more been identified to provide benefits for a plurality of applications, where it can increase efficiency of operation. One of these fields is the industrial automatic harvesting process of asparagus, which is performed so far by cutting the soil ridge at a certain height including all the asparagus spears and subsequently sieving the latter out of the soil. However, the height where the soil is cut is a critical parameter, since a wrong value leads to either damage of the roots of the asparagus plants or to a reduced crop yield as a consequence of too much biomass remaining in the soil. In this paper we present a new approach which utilizes ground penetrating radar for non-invasive sensing in order to obtain information on the optimal height for cutting the soil. Hence, asparagus spears of maximal length can be obtained, while keeping the roots at the same time undamaged. We describe our radar system as well as the subsequent digital signal processing steps utilized for extracting the information required from the recorded radar data, which then can be fed into some harvesting unit for setting up the optimal cutting height.

On the Need to Establish an International Soil Modeling Consortium

NASA Astrophysics Data System (ADS)

Vereecken, H.; Vanderborght, J.; Schnepf, A.

2014-12-01

Soil is one of the most critical life-supporting compartments of the Biosphere. Soil provides numerous ecosystem services such as a habitat for biodiversity, water and nutrients, as well as producing food, feed, fiber and energy. To feed the rapidly growing world population in 2050, agricultural food production must be doubled using the same land resources footprint. At the same time, soil resources are threatened due to improper management and climate change. Despite the many important functions of soil, many fundamental knowledge gaps remain, regarding the role of soil biota and biodiversity on ecosystem services, the structure and dynamics of soil communities, the interplay between hydrologic and biotic processes, the quantification of soil biogeochemical processes and soil structural processes, the resilience and recovery of soils from stress, as well as the prediction of soil development and the evolution of soils in the landscape, to name a few. Soil models have long played an important role in quantifying and predicting soil processes and related ecosystem services. However, a new generation of soil models based on a whole systems approach comprising all physical, mechanical, chemical and biological processes is now required to address these critical knowledge gaps and thus contribute to the preservation of ecosystem services, improve our understanding of climate-change-feedback processes, bridge basic soil science research and management, and facilitate the communication between science and society. To meet these challenges an international community effort is required, similar to initiatives in systems biology, hydrology, and climate and crop research. Our consortium will bring together modelers and experimental soil scientists at the forefront of new technologies and approaches to characterize soils. By addressing these aims, the consortium will contribute to improve the role of soil modeling as a knowledge dissemination instrument in addressing key global issues and stimulate the development of translational research activities. This presentation will provide a compelling case for this much-needed effort, with a focus on tangible benefits to the scientific and food security communities.

Land use alters the resistance and resilience of soil food webs to drought

USGS Publications Warehouse

de Vries, Franciska T.; Liiri, Mira E.; Bjørnlund, Lisa; Bowker, Matthew A.; Christensen, Søren; Setälä, Heikki; Bardgett, Richard D.

2012-01-01

Soils deliver several ecosystem services including carbon sequestration and nutrient cycling, which are of central importance to climate mitigation and sustainable food production. Soil biota play an important role in carbon and nitrogen cycling, and, although the effects of land use on soil food webs are well documented the consequences for their resistance and resilience to climate change are not known. We compared the resistance and resilience to drought--which is predicted to increase under climate change of soil food webs of two common land-use systems: intensively managed wheat with a bacterial-based soil food web and extensively managed grassland with a fungal-based soil food web. We found that the fungal-based food web, and the processes of C and N loss it governs, of grassland soil was more resistant, although not resilient, and better able to adapt to drought than the bacterial-based food web of wheat soil. Structural equation modelling revealed that fungal-based soil food webs and greater microbial evenness mitigated C and N loss. Our findings show that land use strongly affects the resistance and resilience of soil food webs to climate change, and that extensively managed grassland promotes more resistant, and adaptable, fungal-based soil food webs.

Effect of dry spells and soil cracking on runoff generation in a semiarid micro watershed under land use change

NASA Astrophysics Data System (ADS)

dos Santos, Julio Cesar Neves; de Andrade, Eunice Maia; Guerreiro, Maria João Simas; Medeiros, Pedro Henrique Augusto; de Queiroz Palácio, Helba Araújo; de Araújo Neto, José Ribeiro

2016-10-01

Soil and water resources effective management and planning in a river basin rely on understanding of runoff generation processes, yield, and their relations to rainfall. This study analyzes the effects of antecedent soil moisture in an expansive soil and the influence of dry spells on soil cracking, runoff generation and yield in a semiarid tropical region in Brazil subject to land use change. Data were collected from 2009 to 2013 in a 2.8 ha watershed, totaling 179 natural rainfall events. In the first year of study (2009), the watershed maintained a typical dry tropical forest cover (arboreal-shrub Caatinga cover). Before the beginning of the second year of study, gamba grass (Andropogon gayanus Kunth) was cultivated after slash and burn of native vegetation. Gamba grass land use was maintained for the rest of the monitoring period. The occurrence of dry spells and the formation of cracks in the Vertisol soil were the most important factors controlling flow generation. Dry spells promoted crack formation in the expansive soil, which acted as preferential flow paths leading to high initial abstractions: average conditions for runoff to be generated included soil moisture content above 20%, rainfall above 70 mm, I30max above 60 mm h-1 and five continuous dry days at the most. The change of vegetation cover in the second year of study did not alter significantly the overall conditions for runoff initiation, showing similar cumulative flow vs. rainfall response, implying that soil conditions, such as humidity and cracks, best explain the flow generation process on the semiarid micro-scale watershed with Vertisol soil.

On the importance of variable soil depth and process representation in the modeling of shallow landslide initiation

NASA Astrophysics Data System (ADS)

Fatichi, S.; Burlando, P.; Anagnostopoulos, G.

2014-12-01

Sub-surface hydrology has a dominant role on the initiation of rainfall-induced landslides, since changes in the soil water potential affect soil shear strength and thus apparent cohesion. Especially on steep slopes and shallow soils, loss of shear strength can lead to failure even in unsaturated conditions. A process based model, HYDROlisthisis, characterized by high resolution in space and, time is developed to investigate the interactions between surface and subsurface hydrology and shallow landslide initiation. Specifically, 3D variably saturated flow conditions, including soil hydraulic hysteresis and preferential flow, are simulated for the subsurface flow, coupled with a surface runoff routine. Evapotranspiration and specific root water uptake are taken into account for continuous simulations of soil water content during storm and inter-storm periods. The geotechnical component of the model is based on a multidimensional limit equilibrium analysis, which takes into account the basic principles of unsaturated soil mechanics. The model is applied to a small catchment in Switzerland historically prone to rainfall-triggered landslides. A series of numerical simulations were carried out with various boundary conditions (soil depths) and using hydrological and geotechnical components of different complexity. Specifically, the sensitivity to the inclusion of preferential flow and soil hydraulic hysteresis was tested together with the replacement of the infinite slope assumption with a multi-dimensional limit equilibrium analysis. The effect of the different model components on model performance was assessed using accuracy statistics and Receiver Operating Characteristic (ROC) curve. The results show that boundary conditions play a crucial role in the model performance and that the introduced hydrological (preferential flow and soil hydraulic hysteresis) and geotechnical components (multidimensional limit equilibrium analysis) considerably improve predictive capabilities in the presented case study.

Nanomineralogy as a new dimension in understanding elusive geochemical processes in soils: The case of low-solubility-index elements

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schindler, Michael; Hochella, Michael F.

2016-05-20

Nanomineralogy is a new dimension in understanding chemical processes in soils. These processes are revealed at the nanoscale within the structures and compositions of phases that heretofore were not even known to exist in the soils in which they are found. The discovery and understanding of soil chemistry in this way is best accessible via a combination of focused ion beam technology (for sample preparation) and high resolution, analytical transmission electron microscopy (for phase identification). We have used this scientific framework and these techniques to decipher past and present chemical processes in a soil in Sudbury, Ontario, Canada that hasmore » been impacted by both smelter contamination (acidification) and subsequent remediation within the past century. In this study, we use these methods to investigate mobilization and sequestration of the relatively immobile elements Al, Ti and Zr. In a micrometer-thick alteration layer on an albite grain, a first generation of clay minerals represents weathering of the underlying mineral prior to the acidification of the soils. Complex assemblages of Ti- and Zr-bearing nanophases occur on the surfaces of Fe-(hydr)oxide crystals and are the result of the dissolution of silicates and oxides and the mobilization of Ti- and Zr-bearing colloids under acidic conditions. These phases include anatase (TiO2), kleberite (Fe3+Ti6O11(OH)5) Ti4O7, baddelyite (ZrO2), a structural analogue to kelyshite (NaZr[Si2O6(OH)]) and authigenic zircon (ZrSiO4). Subsequent remediation of the acidic soils has resulted in the sequestration of Al and in the neoformation of the clay minerals kaolinite, smectite and illite. These complex mineral assemblages form a porous layer that controls the interaction of the underlying mineral with the environment.« less

Digging Deep: how the convergence of national-scale and field-based soil core data shines a light on sustainability of wetland carbon sequestration

NASA Astrophysics Data System (ADS)

Windham-Myers, L.; Holmquist, J. R.; Sundquist, E. T.; Drexler, J. Z.; Bliss, N.

2016-12-01

Wetland soils have long been recognized as conditional archives of past environments, including vegetation structure, nutrient status, sediment supply and the variability in those factors. Both sedimentary processes and organic accretion processes form the soil matrix that identifies wetland soils as "hydric" while also providing archival insights. As repositories of information on net biogeochemical processes, their down-core and across-site structure can show both consistency and distinction. Through several related studies, we have been exploring the use of component-level U.S. Natural Resources Conservation Service (NRCS) Soil Survey data (SSURGO) to map carbon density to 1m depth across wetlands of the US, with an emphasis on coastal wetlands. To assess the accuracy of mapped carbon data from SSURGO, several field-generated datasets (public or compiled for the NASA-funded Blue Carbon Monitoring Project) have been extracted for key metrics such as dry bulk density (g/cc), organic carbon content (%C by combustion) and the combination, soil carbon density (g C /cc) with depth. These profiles indicate ecogeomorphic feedbacks of elevation, vegetation structure and biogeochemical processes through millennia, illustrating both resilience and shifts in behavior that constrain wetland extent as well as wetland function. National datasets such as SSURGO and validation datasets such as the EPA's National Wetland Condition Assessment (NWCA) and Louisiana's Coastwide Reference Monitoring System (CRMS) are publically available and have been underutilized for predicting and/or validating changes in wetland carbon dynamics. We have explored their use for interpretating and understanding changing carbon accretion rates, changing wetland extents through elevation gain or loss, and changing methane emissions. This talk will focus on insights for wetland carbon sequestration functions as determined by soil core structure, both for coastal settings and potentially for inland wetlands as well.

ORCHIDEE-SOM: modeling soil organic carbon (SOC) and dissolved organic carbon (DOC) dynamics along vertical soil profiles in Europe

NASA Astrophysics Data System (ADS)

Camino-Serrano, Marta; Guenet, Bertrand; Luyssaert, Sebastiaan; Ciais, Philippe; Bastrikov, Vladislav; De Vos, Bruno; Gielen, Bert; Gleixner, Gerd; Jornet-Puig, Albert; Kaiser, Klaus; Kothawala, Dolly; Lauerwald, Ronny; Peñuelas, Josep; Schrumpf, Marion; Vicca, Sara; Vuichard, Nicolas; Walmsley, David; Janssens, Ivan A.

2018-03-01

Current land surface models (LSMs) typically represent soils in a very simplistic way, assuming soil organic carbon (SOC) as a bulk, and thus impeding a correct representation of deep soil carbon dynamics. Moreover, LSMs generally neglect the production and export of dissolved organic carbon (DOC) from soils to rivers, leading to overestimations of the potential carbon sequestration on land. This common oversimplified processing of SOC in LSMs is partly responsible for the large uncertainty in the predictions of the soil carbon response to climate change. In this study, we present a new soil carbon module called ORCHIDEE-SOM, embedded within the land surface model ORCHIDEE, which is able to reproduce the DOC and SOC dynamics in a vertically discretized soil to 2 m. The model includes processes of biological production and consumption of SOC and DOC, DOC adsorption on and desorption from soil minerals, diffusion of SOC and DOC, and DOC transport with water through and out of the soils to rivers. We evaluated ORCHIDEE-SOM against observations of DOC concentrations and SOC stocks from four European sites with different vegetation covers: a coniferous forest, a deciduous forest, a grassland, and a cropland. The model was able to reproduce the SOC stocks along their vertical profiles at the four sites and the DOC concentrations within the range of measurements, with the exception of the DOC concentrations in the upper soil horizon at the coniferous forest. However, the model was not able to fully capture the temporal dynamics of DOC concentrations. Further model improvements should focus on a plant- and depth-dependent parameterization of the new input model parameters, such as the turnover times of DOC and the microbial carbon use efficiency. We suggest that this new soil module, when parameterized for global simulations, will improve the representation of the global carbon cycle in LSMs, thus helping to constrain the predictions of the future SOC response to global warming.

Detecting and enumerating soil-transmitted helminth eggs in soil: New method development and results from field testing in Kenya and Bangladesh.

PubMed

Steinbaum, Lauren; Kwong, Laura H; Ercumen, Ayse; Negash, Makeda S; Lovely, Amira J; Njenga, Sammy M; Boehm, Alexandria B; Pickering, Amy J; Nelson, Kara L

2017-04-01

Globally, about 1.5 billion people are infected with at least one species of soil-transmitted helminth (STH). Soil is a critical environmental reservoir of STH, yet there is no standard method for detecting STH eggs in soil. We developed a field method for enumerating STH eggs in soil and tested the method in Bangladesh and Kenya. The US Environmental Protection Agency (EPA) method for enumerating Ascaris eggs in biosolids was modified through a series of recovery efficiency experiments; we seeded soil samples with a known number of Ascaris suum eggs and assessed the effect of protocol modifications on egg recovery. We found the use of 1% 7X as a surfactant compared to 0.1% Tween 80 significantly improved recovery efficiency (two-sided t-test, t = 5.03, p = 0.007) while other protocol modifications-including different agitation and flotation methods-did not have a significant impact. Soil texture affected the egg recovery efficiency; sandy samples resulted in higher recovery compared to loamy samples processed using the same method (two-sided t-test, t = 2.56, p = 0.083). We documented a recovery efficiency of 73% for the final improved method using loamy soil in the lab. To field test the improved method, we processed soil samples from 100 households in Bangladesh and 100 households in Kenya from June to November 2015. The prevalence of any STH (Ascaris, Trichuris or hookworm) egg in soil was 78% in Bangladesh and 37% in Kenya. The median concentration of STH eggs in soil in positive samples was 0.59 eggs/g dry soil in Bangladesh and 0.15 eggs/g dry soil in Kenya. The prevalence of STH eggs in soil was significantly higher in Bangladesh than Kenya (chi-square, χ2 = 34.39, p < 0.001) as was the concentration (Mann-Whitney, z = 7.10, p < 0.001). This new method allows for detecting STH eggs in soil in low-resource settings and could be used for standardizing soil STH detection globally.

Compositon of sediments transported by the wind at different heights

NASA Astrophysics Data System (ADS)

Iturri, Antonela; Funk, Roger; Leue, Martin; Sommer, Michael; Buschiazzo, Daniel

2017-04-01

Wind erosion (WE) is one of the most important degradation process of soils in arid- and semiarid environments in the world, affecting soil properties and adjacent ecosystems, including human health. Estimations about the amount of eroded soil are available in Argentina and in the world, but the quality of the eroded sediments, particularly the sorting effects in agricultural soils, has been scarcely studied. The trend of the different mineral and organic soil compounds, which enrich in different size classes, can define height distribution profiles. Therefore, the uppermost 2.5 cm of four agricultural loess soils that differ in granulometric composition were used for WE simulations in a wind tunnel. Particles with a diameter smaller than 10 µm (PM10) were collected with a laboratory dust generator. The bulk soil and all the sediment samples were characterized by the granulometric composition, the soil organic carbon (SOC) content and the mineral and organic functional groups. Despite different texture, the soils were subjected to similar sorting processes in height, but differed depending on their granulometry. There was a separation between coarser and finer soil particles in coarser textured soils, while finer textured soils were more homogeneous in all heights. This correlated with the preferential transport of Si-O from quartz and C-H, C=O and C-C from soil organic matter (SOM), which were transported in larger and/or denser particles at lower heights. O-H from clay minerals and C-O-C and C-O from polysaccharides, carbohydrates and derivatives from SOM were transported in higher heights. Despite similar SOC content in the bulk soils, both the amount and composition in the PM10 fractions was different. The SOC transported at higher heights was mostly composed of polysaccharides, carbohydrates and derivatives associated with clay minerals. The SOC in PM10 fractions of coarser-textured soils was dominated by labile C-H groups. According to the determined height distribution profiles, it can be deduced that WE may affect both soil quality and the soil C balance due to the sorting effects during transport.

Detecting and enumerating soil-transmitted helminth eggs in soil: New method development and results from field testing in Kenya and Bangladesh

PubMed Central

Kwong, Laura H.; Ercumen, Ayse; Negash, Makeda S.; Lovely, Amira J.; Njenga, Sammy M.; Boehm, Alexandria B.; Pickering, Amy J.; Nelson, Kara L.

2017-01-01

Globally, about 1.5 billion people are infected with at least one species of soil-transmitted helminth (STH). Soil is a critical environmental reservoir of STH, yet there is no standard method for detecting STH eggs in soil. We developed a field method for enumerating STH eggs in soil and tested the method in Bangladesh and Kenya. The US Environmental Protection Agency (EPA) method for enumerating Ascaris eggs in biosolids was modified through a series of recovery efficiency experiments; we seeded soil samples with a known number of Ascaris suum eggs and assessed the effect of protocol modifications on egg recovery. We found the use of 1% 7X as a surfactant compared to 0.1% Tween 80 significantly improved recovery efficiency (two-sided t-test, t = 5.03, p = 0.007) while other protocol modifications—including different agitation and flotation methods—did not have a significant impact. Soil texture affected the egg recovery efficiency; sandy samples resulted in higher recovery compared to loamy samples processed using the same method (two-sided t-test, t = 2.56, p = 0.083). We documented a recovery efficiency of 73% for the final improved method using loamy soil in the lab. To field test the improved method, we processed soil samples from 100 households in Bangladesh and 100 households in Kenya from June to November 2015. The prevalence of any STH (Ascaris, Trichuris or hookworm) egg in soil was 78% in Bangladesh and 37% in Kenya. The median concentration of STH eggs in soil in positive samples was 0.59 eggs/g dry soil in Bangladesh and 0.15 eggs/g dry soil in Kenya. The prevalence of STH eggs in soil was significantly higher in Bangladesh than Kenya (chi-square, χ2 = 34.39, p < 0.001) as was the concentration (Mann-Whitney, z = 7.10, p < 0.001). This new method allows for detecting STH eggs in soil in low-resource settings and could be used for standardizing soil STH detection globally. PMID:28379956

Explosive detonation causes an increase in soil porosity leading to increased TNT transformation.

PubMed

Yu, Holly A; Nic Daeid, Niamh; Dawson, Lorna A; DeTata, David A; Lewis, Simon W

2017-01-01

Explosives are a common soil contaminant at a range of sites, including explosives manufacturing plants and areas associated with landmine detonations. As many explosives are toxic and may cause adverse environmental effects, a large body of research has targeted the remediation of explosives residues in soil. Studies in this area have largely involved spiking 'pristine' soils using explosives solutions. Here we investigate the fate of explosives present in soils following an actual detonation process and compare this to the fate of explosives spiked into 'pristine' undetonated soils. We also assess the effects of the detonations on the physical properties of the soils. Our scanning electron microscopy analyses reveal that detonations result in newly-fractured planes within the soil aggregates, and novel micro Computed Tomography analyses of the soils reveal, for the first time, the effect of the detonations on the internal architecture of the soils. We demonstrate that detonations cause an increase in soil porosity, and this correlates to an increased rate of TNT transformation and loss within the detonated soils, compared to spiked pristine soils. We propose that this increased TNT transformation is due to an increased bioavailability of the TNT within the now more porous post-detonation soils, making the TNT more easily accessible by soil-borne bacteria for potential biodegradation. This new discovery potentially exposes novel remediation methods for explosive contaminated soils where actual detonation of the soil significantly promotes subsequent TNT degradation. This work also suggests previously unexplored ramifications associated with high energy soil disruption.

Vadose zone process that control landslide initiation and debris flow propagation

NASA Astrophysics Data System (ADS)

Sidle, Roy C.

2015-04-01

Advances in the areas of geotechnical engineering, hydrology, mineralogy, geomorphology, geology, and biology have individually advanced our understanding of factors affecting slope stability; however, the interactions among these processes and attributes as they affect the initiation and propagation of landslides and debris flows are not well understood. Here the importance of interactive vadose zone processes is emphasized related to the mechanisms, initiation, mode, and timing of rainfall-initiated landslides that are triggered by positive pore water accretion, loss of soil suction and increase in overburden weight, and long-term cumulative rain water infiltration. Both large- and small-scale preferential flow pathways can both contribute to and mitigate instability, by respectively concentrating and dispersing subsurface flow. These mechanisms are influenced by soil structure, lithology, landforms, and biota. Conditions conducive to landslide initiation by infiltration versus exfiltration are discussed relative to bedrock structure and joints. The effects of rhizosphere processes on slope stability are examined, including root reinforcement of soil mantles, evapotranspiration, and how root structures affect preferential flow paths. At a larger scale, the nexus between hillslope landslides and in-channel debris flows is examined with emphasis on understanding the timing of debris flows relative to chronic and episodic infilling processes, as well as the episodic nature of large rainfall and related stormflow generation in headwater streams. The hydrogeomorphic processes and conditions that determine whether or not landslides immediately mobilize into debris flows is important for predicting the timing and extent of devastating debris flow runout in steep terrain. Given the spatial footprint of individual landslides, it is necessary to assess vadose zone processes at appropriate scales to ascertain impacts on mass wasting phenomena. Articulating the appropriate level of detail of small-scale vadose zone processes into landslide models is a particular challenge. As such, understanding flow pathways in regoliths susceptible to mass movement is critical, including distinguishing between conditions conducive to vertical recharge of water through relatively homogeneous soil mantles and conditions where preferential flow dominates - either by rapid infiltration and lateral flow through interconnected preferential flow networks or via exfiltration through bedrock fractures. These different hydrologic scenarios have major implications for the occurrence, timing, and mode of slope failures.

Increased microbial functional diversity under long-term organic and integrated fertilization in a paddy soil.

PubMed

Ding, Long-Jun; Su, Jian-Qiang; Sun, Guo-Xin; Wu, Jin-Shui; Wei, Wen-Xue

2018-02-01

Microbes play key roles in diverse biogeochemical processes including nutrient cycling. However, responses of soil microbial community and functional genes to long-term integrated fertilization (chemical combined with organic fertilization) remain unclear. Here, we used pyrosequencing and a microarray-based GeoChip to explore the shifts of microbial community and functional genes in a paddy soil which received over 21-year fertilization with various regimes, including control (no fertilizer), rice straw (R), rice straw plus chemical fertilizer nitrogen (NR), N and phosphorus (NPR), NP and potassium (NPKR), and reduced rice straw plus reduced NPK (L-NPKR). Significant shifts of the overall soil bacterial composition only occurred in the NPKR and L-NPKR treatments, with enrichment of certain groups including Bradyrhizobiaceae and Rhodospirillaceae families that benefit higher productivity. All fertilization treatments significantly altered the soil microbial functional structure with increased diversity and abundances of genes for carbon and nitrogen cycling, in which NPKR and L-NPKR exhibited the strongest effect, while R exhibited the least. Functional gene structure and abundance were significantly correlated with corresponding soil enzymatic activities and rice yield, respectively, suggesting that the structural shift of the microbial functional community under fertilization might promote soil nutrient turnover and thereby affect yield. Overall, this study indicates that the combined application of rice straw and balanced chemical fertilizers was more pronounced in shifting the bacterial composition and improving the functional diversity toward higher productivity, providing a microbial point of view on applying a cost-effective integrated fertilization regime with rice straw plus reduced chemical fertilizers for sustainable nutrient management.

A physically-based Distributed Hydrologic Model for Tropical Catchments

NASA Astrophysics Data System (ADS)

Abebe, N. A.; Ogden, F. L.

2010-12-01

Hydrological models are mathematical formulations intended to represent observed hydrological processes in a watershed. Simulated watersheds in turn vary in their nature based on their geographic location, altitude, climatic variables and geology and soil formation. Due to these variations, available hydrologic models vary in process formulation, spatial and temporal resolution and data demand. Many tropical watersheds are characterized by extensive and persistent biological activity and a large amount of rain. The Agua Salud catchments located within the Panama Canal Watershed, Panama, are such catchments identified by steep rolling topography, deep soils derived from weathered bedrock, and limited exposed bedrock. Tropical soils are highly affected by soil cracks, decayed tree roots and earthworm burrows forming a network of preferential flow paths that drain to a perched water table, which forms at a depth where the vertical hydraulic conductivity is significantly reduced near the bottom of the bioturbation layer. We have developed a physics-based, spatially distributed, multi-layered hydrologic model to simulate the dominant processes in these tropical watersheds. The model incorporates the major flow processes including overland flow, channel flow, matrix and non-Richards film flow infiltration, lateral downslope saturated matrix and non-Darcian pipe flow in the bioturbation layer, and deep saturated groundwater flow. Emphasis is given to the modeling of subsurface unsaturated zone soil moisture dynamics and the saturated preferential lateral flow from the network of macrospores. Preliminary results indicate that the model has the capability to simulate the complex hydrological processes in the catchment and will be a useful tool in the ongoing comprehensive ecohydrological studies in tropical catchments, and help improve our understanding of the hydrological effects of deforestation and aforestation.

How does slope form affect erosion in CATFLOW-SED?

NASA Astrophysics Data System (ADS)

Gabelmann, Petra; Wienhöfer, Jan; Zehe, Erwin

2016-04-01

Erosion is a severe environmental problem in agro-ecosystems with highly erodible loess soils. It is controlled by various factors, e.g. rainfall intensity, initial wetness conditions, soil type, land use and tillage practice. Furthermore slope form and gradient have been shown to influence erosion amounts to a large extent. Within the last fifty years, various erosion models have been developed to describe the erosion process, estimate erosion amounts and identify erosion-prone areas. These models differ in terms of complexity, the processes which are considered, and the data required for model calibration and they can be categorised into empirical or statistical, conceptual, and physically-based models. CATFLOW-SED is a process-based hydrology and erosion model that can operate on catchment and hillslope scales. Soil water dynamics are described by the Richards equation including effective approaches for preferential flow. Evapotranspiration is simulated using an approach based on the Penman-Monteith equation. The model simulates overland flow using the diffusion wave equation. Soil detachment is related to the attacking forces of rainfall and overland flow, and the erosion resistance of soil. Sediment transport capacity and sediment deposition are related to overland flow velocity using the equation of Engelund and Hansen and the sinking velocity of grain sizes respectively. We performed a study to analyse the erosion process on different virtual hillslopes, with varying slope gradient and slope form, using the CATFLOW-SED model. We explored the role of landform on erosion and sedimentation, particularly we look for forms that either maximise or minimise erosion. Results indicate the importance to performing the process implementation within physically meaningful limits and choose appropriate model parameters respectively.

Predicting the mineral composition of dust aerosols – Part 1: Representing key processes

DOE PAGES

Perlwitz, J. P.; Perez Garcia-Pando, C.; Miller, R. L.

2015-10-21

Soil dust aerosols created by wind erosion are typically assigned globally uniform physical and chemical properties within Earth system models, despite known regional variations in the mineral content of the parent soil. Mineral composition of the aerosol particles is important to their interaction with climate, including shortwave absorption and radiative forcing, nucleation of cloud droplets and ice crystals, heterogeneous formation of sulfates and nitrates, and atmospheric processing of iron into bioavailable forms that increase the productivity of marine phytoplankton. Here, aerosol mineral composition is derived by extending a method that provides the composition of a wet-sieved soil. The extension accountsmore » for measurements showing significant differences between the mineral fractions of the wet-sieved soil and the emitted aerosol concentration. For example, some phyllosilicate aerosols are more prevalent at silt sizes, even though they are nearly absent at these diameters in a soil whose aggregates are dispersed by wet sieving. We calculate the emitted mass of each mineral with respect to size by accounting for the disintegration of soil aggregates during wet sieving. These aggregates are emitted during mobilization and fragmentation of the original undispersed soil that is subject to wind erosion. The emitted aggregates are carried far downwind from their parent soil. The soil mineral fractions used to calculate the aggregates also include larger particles that are suspended only in the vicinity of the source. We calculate the emitted size distribution of these particles using a normalized distribution derived from aerosol measurements. In addition, a method is proposed for mixing minerals with small impurities composed of iron oxides. These mixtures are important for transporting iron far from the dust source, because pure iron oxides are more dense and vulnerable to gravitational removal than most minerals comprising dust aerosols. Finally, a limited comparison to measurements from North Africa shows that the model extensions result in better agreement, consistent with a more extensive comparison to global observations as well as measurements of elemental composition downwind of the Sahara, as described in companion articles.« less

Landscape cultivation alters δ30Si signature in terrestrial ecosystems.

NASA Astrophysics Data System (ADS)

Vandevenne, F. I.; Delvaux, C.; Huyghes, H.; Ronchi, B.; Govers, G.; Barão, A. L.; Clymans, W.; Meire, P.; André, L.; Struyf, E.

2014-12-01

Despite increasing recognition of the importance of biological Si cycling in controlling dissolved Si (DSi) in soil and stream water, effects of human cultivation on the Si cycle remain poorly understood. Sensitive tracer techniques to identify and quantify Si in the soil-plant-water system could be highly relevant in addressing these uncertainties. Stable Si isotopes are promising tools to define Si sources and sinks along the ecosystem flow path, as intense fractionation occurs during chemical weathering and uptake of dissolved Si in plants. Yet they remain underexploited in the end product of the soil-plant system: the soil water. Here, stable Si isotope ratios (δ30Si) of dissolved Si in soil water were measured along a land use gradient (continuous forest, continuous pasture, young cropland and continuous cropland) with similar parent material (loess) and homogenous bulk mineralogical and climatological properties (Belgium). Soil water δ30Si signatures are clearly separated along the gradient, with highest average signatures in continuous cropland (+1.61‰), intermediate in pasture (+1.05‰) and young cropland (+0.89 ‰) and lowest in forest soil water (+0.62‰). Our data do not allow distinguishing biological from pedogenic/lithogenic processes, but point to a strong interaction of both. We expect that increasing export of light isotopes in disturbed land uses (i.e. through agricultural harvest), and higher recycling of 28Si and elevated weathering intensity (including clay dissolution) in forest systems will largely determine soil water δ30Si signatures of our systems. Our results imply that soil water δ30Si signature is biased through land management before it reaches rivers and coastal zones, where other fractionation processes take over (e.g. diatom uptake and reverse weathering in floodplains). In particular, a direct role of agriculture systems in lowering export Si fluxes towards rivers and coastal systems has been shown. Stable Si isotopes have a large potential to track human disturbance on the Si cycle, including subtle changes in clay evolution and biogenic sink/source functions as induced by land use conversions.

Landscape cultivation alters δ30Si signature in terrestrial ecosystems

NASA Astrophysics Data System (ADS)

Vandevenne, Floor; Delvaux, Claire; Hughes, Harold; Ronchi, Benedicta; Clymans, Wim; Barao, Ana Lucia; Govers, Gerard; Cornelis, Jean Thomas; André, Luc; Struyf, Eric

2015-04-01

Despite increasing recognition of the importance of biological Si cycling in controlling dissolved Si (DSi) in soil and stream water, effects of human cultivation on the Si cycle remain poorly understood. Sensitive tracer techniques to identify and quantify Si in the soil-plant-water system could be highly relevant in addressing these uncertainties. Stable Si isotopes are promising tools to define Si sources and sinks along the ecosystem flow path, as intense fractionation occurs during chemical weathering and uptake of dissolved Si in plants. Yet they remain underexploited in the end product of the soil-plant system: the soil water. Here, stable Si isotope ratios (δ30Si) of dissolved Si in soil water were measured along a land use gradient (continuous forest, continuous pasture, young cropland and continuous cropland) with similar parent material (loess) and homogenous bulk mineralogical and climatological (Belgium). Soil water δ30Si signatures are clearly separated along the gradient, with highest average signatures in continuous cropland (+1.61%), intermediate in pasture (+1.05%) and young cropland (+0.89%) and lowest in forest soil water (+0.62%). Our data do not allow distinguishing biological from pedogenic/lithogenic processes, but point to a strong interaction of both. We expect that increasing export of light isotopes in disturbed land uses (i.e. through agricultural harvest), and higher recycling of 28Si and elevated weathering intensity (including clay dissolution) in forest systems will largely determine soil water δ30Si signatures of our systems. Our results imply that soil water δ30Si signature is biased through land management before it reaches rivers and coastal zones, where other fractionation processes take over (e.g. diatom uptake and reverse weathering in floodplains). In particular, a direct role of agriculture systems in lowering export Si fluxes towards rivers and coastal systems has been shown. Stable Si isotopes have a large potential to track human disturbance on the Si cycle, including subtle changes in clay evolution and biogenic sink/source functions as induced by land use conversions.

EVALUATION OF A SOIL AMENDMENT PROCESS DEMONSTRATION FOR REDUCING THE BIOAVAILABILITY OF LEAD

EPA Science Inventory

The USEPA evaluated an in situ application of a soil amendment process at a residential site that was contaminated with lead. The goal of the evaluation was to determine if the soil amendment process resulted in lower concentrations of bioavailable lead in the contaminated soils...

X-Ray Amorphous Phases in Antarctica Dry Valley Soils: Insight into Aqueous Alteration Processes on Mars?

NASA Technical Reports Server (NTRS)

Ming, D. W.; Morris, R. V.; Rampe, E. B.; Golden, D. C.; Quinn, J. E.

2015-01-01

The Chemistry and Mineralogy (CheMin) instrument onboard the Mars Curiosity rover has detected abundant amounts (approx. 25-30 weight percentage) of X-ray amorphous materials in a windblown deposit (Rocknest) and in a sedimentary mudstone (Cumberland and John Klein) in Gale crater, Mars. On Earth, X-ray amorphous components are common in soils and sediments, but usually not as abundant as detected in Gale crater. One hypothesis for the abundant X-ray amorphous materials on Mars is limited interaction of liquid water with surface materials, kinetically inhibiting maturation to more crystalline phases. The objective of this study was to characterize the chemistry and mineralogy of soils formed in the Antarctica Dry Valleys, one of the driest locations on Earth. Two soils were characterized from different elevations, including a low elevation, coastal, subxerous soil in Taylor Valley and a high elevation, ultraxerous soil in University Valley. A variety of techniques were used to characterize materials from each soil horizon, including Rietveld analysis of X-ray diffraction data. For Taylor Valley soil, the X-ray amorphous component ranged from about 4 weight percentage in the upper horizon to as high as 15 weight percentage in the lowest horizon just above the permafrost layer. Transmission electron microscopy indicated that the presence of short-range ordered (SRO) smectite was the most likely candidate for the X-ray amorphous materials in the Taylor Valley soils. The SRO smectite is likely an aqueous alteration product of mica inherited from granitic materials during glaciation of Taylor Valley. The drier University Valley soils had lower X-ray amorphous contents of about 5 weight percentage in the lowest horizon. The X-ray amorphous materials in University Valley are attributed to nanoparticles of TiO2 and possibly amorphous SiO2. The high abundance of X-ray amorphous materials in Taylor Valley is surprising for one of the driest places on Earth. These materials may have been physically and chemical altered during soil formation, however, the limited interaction with water and low temperatures may result in the formation of "immature" X-ray amorphous or SRO materials. Perhaps, a similar process contributes to the formation of the high content of X-ray amorphous materials detected on Mars.

Modeling of Soil Erosion by IntErO model: The Case Study of the Novsicki Potok Watershed, of the Prokletije high mountains of Montenegro

NASA Astrophysics Data System (ADS)

Spalevic, Velibor; Al-Turki, Ali M.; Barovic, Goran; Leandro Naves Silva, Marx; Djurovic, Nevenka; Soares Souza, Walisson; Veloso Gomes Batista, Pedro; Curovic, Milic

2016-04-01

The application of soil conservation programs to combat erosion and sedimentation are significantly contributing to the protection of the natural resources. Watershed management practices include the assessment of Physical-Geographical, Climate, Geological, Pedological characteristics, including the analysis of Land Use of the regions concerned. The policy makers are increasingly looking for the different land uses and climatic scenarios that can be used for valuable projections for watershed management. To increase knowledge about those processes, use of hydrological and soil erosion models is needed and that is allowing quantification of soil redistribution and sediment productions. We focused on soil erosion processes in one of Northern Montenegrin mountain watersheds, the Novsicki Potok Watershed of the Polimlje River Basin, using modeling techniques: the IntErO model for calculation of runoff and soil loss. The model outcomes were validated through measurements of lake sediment deposition at the Potpec hydropower plant dam. Our findings indicate a medium potential of soil erosion risk. With 464 m³ yr-1 of annual sediment yield, corresponding to an area-specific sediment yield of 270 m³km-2 yr-1, the Novsicki Potok drainage basin belongs to the Montenegrin basins with the medium sediment discharge; according to the erosion type, it is surface erosion. The value of the Z coefficient was calculated on 0.403, what indicates that the river basin belongs to 3rd destruction category (of five). Our results suggest that the calculated peak discharge from the river basin was 82 m3s-1 for the incidence of 100 years. According to our analysis there is a possibility for large flood waves to appear in the studied river basin. With this research we, to some extent, improved the knowledge on the status of sediment yield and runoff of the river basins of Montenegro, where the map of Soil erosion is still not prepared. The IntErO model we used in this study is relatively novel concept and is highly recommended for soil erosion modelling in other river basins similar to the studied watershed, because of its simple identification of critical areas affected by the soil loss caused by soil erosion.

PFAM 2.0 - Documentations

EPA Pesticide Factsheets

The advanced capabilities of PFAM include accounting for water and pest management practices and for degradation in soil and aquatic environments, as well as for post processing of discharged paddy waters to a user-defined receiving water.

Method to measure soil matrix infiltration in forest soil

NASA Astrophysics Data System (ADS)

Zhang, Jing; Lei, Tingwu; Qu, Liqin; Chen, Ping; Gao, Xiaofeng; Chen, Chao; Yuan, Lili; Zhang, Manliang; Su, Guangxu

2017-09-01

Infiltration of water into forest soil commonly involves infiltration through the matrix body and preferential passages. Determining the matrix infiltration process is important in partitioning water infiltrating into the soil through the soil body and macropores to evaluate the effects of soil and water conservation practices on hillslope hydrology and watershed sedimentation. A new method that employs a double-ring infiltrometer was applied in this study to determine the matrix infiltration process in forest soil. Field experiments were conducted in a forest field on the Loess Plateau at Tianshui Soil and Water Conservation Experimental Station. Nylon cloth was placed on the soil surface in the inner ring and between the inner and outer rings of infiltrometers. A thin layer of fine sands were placed onto the nylon cloth to shelter the macropores and ensure that water infiltrates the soil through the matrix only. Brilliant Blue tracers were applied to examine the exclusion of preferential flow occurrences in the measured soil body. The infiltration process was measured, computed, and recorded through procedures similar to those of conventional methods. Horizontal and vertical soil profiles were excavated to check the success of the experiment and ensure that preferential flow did not occur in the measured soil column and that infiltration was only through the soil matrix. The infiltration processes of the replicates of five plots were roughly the same, thereby indicating the feasibility of the methodology to measure soil matrix infiltration. The measured infiltration curves effectively explained the transient process of soil matrix infiltration. Philip and Kostiakov models fitted the measured data well, and all the coefficients of determination were greater than 0.9. The wetted soil bodies through excavations did not present evidence of preferential flow. Therefore, the proposed method can determine the infiltration process through the forest soil matrix. This method can also be applied to explore matrix infiltration in other land-use types.

Hydrologic regime controls soil phosphorus fluxes in restoration and undisturbed wetlands

USGS Publications Warehouse

Aldous, A.; McCormick, P.; Ferguson, C.; Graham, S.; Craft, C.

2005-01-01

Many wetland restoration projects occur on former agricultural soils that have a history of disturbance and fertilization, making them prone to phosphorus (P) release upon flooding. To study the relationship between P release and hydrologic regime, we collected soil cores from three restoration wetlands and three undisturbed wetlands around Upper Klamath Lake in southern Oregon, U.S.A. Soil cores were subjected to one of three hydrologic regimes - flooded, moist, and dry - for 7.5 weeks, and P fluxes were measured upon reflooding. Soils from restoration wetlands released P upon reflooding regardless of the hydrologic regime, with the greatest releases coming from soils that had been flooded or dried. Undisturbed wetland soils released P only after drying. Patterns in P release can be explained by a combination of physical and biological processes, including the release of iron-bound P due to anoxia in the flooded treatment and the mineralization of organic P under aerobic conditions in the dry treatment. Higher rates of soil P release from restoration wetland soils, particularly under flooded conditions, were associated with higher total P concentrations compared with undisturbed wetland soils. We conclude that maintaining moist soil is the means to minimize P release from recently flooded wetland soils. Alternatively, prolonged flooding provides a means of liberating excess labile P from former agricultural soils while minimizing continued organic P mineralization and soil subsidence. ?? 2005 Society for Ecological Restoration International.

Optimizing the Hydrological and Biogeochemical Simulations on a Hillslope with Stony Soil

NASA Astrophysics Data System (ADS)

Zhu, Q.

2017-12-01

Stony soils are widely distributed in the hilly area. However, traditional pedotransfer functions are not reliable in predicting the soil hydraulic parameters for these soils due to the impacts of rock fragments. Therefore, large uncertainties and errors may exist in the hillslope hydrological and biogeochemical simulations in stony soils due to poor estimations of soil hydraulic parameters. In addition, homogenous soil hydraulic parameters are usually used in traditional hillslope simulations. However, soil hydraulic parameters are spatially heterogeneous on the hillslope. This may also cause the unreliable simulations. In this study, we obtained soil hydraulic parameters using five different approaches on a tea hillslope in Taihu Lake basin, China. These five approaches included (1) Rossetta predicted and spatially homogenous, (2) Rossetta predicted and spatially heterogeneous), (3) Rossetta predicted, rock fragment corrected and spatially homogenous, (4) Rossetta predicted, rock fragment corrected and spatially heterogeneous, and (5) extracted from observed soil-water retention curves fitted by dual-pore function and spatially heterogeneous (observed). These five sets of soil hydraulic properties were then input into Hydrus-3D and DNDC to simulate the soil hydrological and biogeochemical processes. The aim of this study is testing two hypotheses. First, considering the spatial heterogeneity of soil hydraulic parameters will improve the simulations. Second, considering the impact of rock fragment on soil hydraulic parameters will improve the simulations.

Contribution of attendant anions on cadmium toxicity to soil enzymes.

PubMed

Tian, Haixia; Kong, Long; Megharaj, Mallavarapu; He, Wenxiang

2017-11-01

Sorption and desorption are critical processes to control the mobility and biotoxicity of cadmium (Cd) in soils. It is known that attendant anion species of heavy metals could affect metal adsorption on soils and might further alter their biotoxicity. However, for Cd, the influence of attendant anions on its sorption in soils and subsequent toxicity on soil enzymes are still unknown. In this work, four Cd compounds with different salt anions (SO 4 2- , NO 3 - , Cl - , and Ac - ) were selected to investigate their impact of on the sorption, soil dehydrogenase activity (DHA) and alkaline phosphatase activity (ALP). Thus, a series of simulated Cd pollution batch experiments including measuring adsorption-desorption behavior of Cd on soils and soil enzyme activities were carried out. Results showed that CdSO 4 exhibited highest sorption capacity among the tested soils except in Hunan soil. The Cd sorption with NO 3 - displayed a similar behavior with Cl - on all tested soils. Compared with soil properties, all four kinds of anions on Cd sorption played a more significant role affecting Cd ecological toxicity to soil DHA and ALP. Cd in acetate or nitrate form appears more sensitive towards DHA than sulphate and chloride, while the later pair is more toxic towards ALP than the former. These results have important implications for evaluation of Cd contamination using soil enzyme as bioindicator. Copyright © 2017 Elsevier Ltd. All rights reserved.

Soil bacterial community response to vegetation succession after fencing in the grassland of China.

PubMed

Zeng, Quanchao; An, Shaoshan; Liu, Yang

2017-12-31

Natural succession is an important process in terrestrial system, playing an important role in enhancing soil quality and plant diversity. Soil bacteria is the linkage between soil and plant, has an important role in aboveground community dynamics and ecosystem functioning in terrestrial ecosystems, driving the decomposition of soil organic matter and plant litter. However, the role of soil bacteria in the secondary succession has not been well understood, particularly in the degraded soil of Loess Plateau. In this study, we investigated soil nutrients and soil bacterial community during the secondary succession after a long-term fencing in the grassland, in the Yuwu Mountain, northwest China. The chronosequence included 1year, 12years, 20years and 30years. The soil bacterial community composition was determined by the Illumina HiSeq sequencing method. The data showed that soil bacterial diversity had no significant changes along the chronosequence, but soil bacterial community compositions significantly changed. Proteobacteria, Acidobacteria and Actinobacteria were the main phyla in all the samples across succession. With the accumulation of soil organic matter and nutrients, the relative abundance of Actinobacteria decreased, whereas Proteobacteria increased. These shifts may be caused by the increase of the available nutrients across the secondary succession. In the younger sites, soils were dominated by oligotrophic groups, whereas soil in the late-succession site were dominated by copiotrophic groups, indicating the dependence of soil bacterial community composition on the contents of soil available nutrients. Copyright © 2017 Elsevier B.V. All rights reserved.

Dynamics and characteristics of soil temperature and moisture of active layer in central Tibetan Plateau

NASA Astrophysics Data System (ADS)

Zhao, L.; Hu, G.; Wu, X.; Tian, L.

2017-12-01

Research on the hydrothermal properties of active layer during the thawing and freezing processes was considered as a key question to revealing the heat and moisture exchanges between permafrost and atmosphere. The characteristics of freezing and thawing processes at Tanggula (TGL) site in permafrost regions on the Tibetan Plateau, the results revealed that the depth of daily soil temperature transmission was about 40 cm shallower during thawing period than that during the freezing period. Soil warming process at the depth above 140 cm was slower than the cooling process, whereas they were close below 140 cm depth. Moreover, the hydro-thermal properties differed significantly among different stages. Precipitation caused an obviously increase in soil moisture at 0-20 cm depth. The vertical distribution of soil moisture could be divided into two main zones: less than 12% in the freeze state and greater than 12% in the thaw state. In addition, coupling of moisture and heat during the freezing and thawing processes also showed that soil temperature decreased faster than soil moisture during the freezing process. At the freezing stage, soil moisture exhibited an exponential relationship with the absolute soil temperature. Energy consumed for water-ice conversion during the freezing process was 149.83 MJ/m2 and 141.22 MJ/m2 in 2011 and 2012, respectively, which was estimated by the soil moisture variation.

Soils as relative-age dating tools

USGS Publications Warehouse

Markewich, Helaine Walsh; Pavich, Milan J.; Wysocki, Douglas A.

2017-01-01

Soils develop at the earth's surface via multiple processes that act through time. Precluding burial or disturbance, soil genetic horizons form progressively and reflect the balance among formation processes, surface age, and original substrate composition. Soil morphology provides a key link between process and time (soil age), enabling soils to serve as both relative and numerical dating tools for geomorphic studies and landscape evolution. Five major factors define the contemporary state of all soils: climate, organisms, topography, parent material, and time. Soils developed on similar landforms and parent materials within a given landscape comprise what we term a soil/landform/substrate complex. Soils on such complexes that differ in development as a function of time represent a soil chronosequence. In a soil chronosequence, time constitutes the only independent formation factor; the other factors act through time. Time dictates the variations in soil development or properties (field or laboratory measured) on a soil/landform/substrate complex. Using a dataset within the chronosequence model, we can also formulate various soil development indices based upon one or a combination of soil properties, either for individual soil horizons or for an entire profile. When we evaluate soil data or soil indices mathematically, the resulting equation creates a chronofunction. Chronofunctions help quantify processes and mechanisms involved in soil development, and relate them mathematically to time. These rigorous kinds of comparisons among and within soil/landform complexes constitute an important tool for relative-age dating. After determining one or more absolute ages for a soil/landform complex, we can calculate quantitative soil formation, and or landform-development rates. Multiple dates for several complexes allow rate calculations for soil/landform-chronosequence development and soil-chronofunction calibration.

A novel in-situ method for real-time monitoring of gas transport in soil

NASA Astrophysics Data System (ADS)

Laemmel, Thomas; Maier, Martin; Schack-Kirchner, Helmer; Lang, Friederike

2017-04-01

Gas exchange between soil and atmosphere is important for the biogeochemistry of soils. Gas transport in soil is commonly assumed to be governed by molecular diffusion and is usually described by the soil gas diffusion coefficient DS characterizing the ability of the soil to "transport passively" gas through the soil. One way to determine DS is sampling soil cores in the field and measuring DS in the lab. Unfortunately this method is destructive and laborious. Moreover, a few previous field studies identified other gas transport processes in soil to significantly enhance the diffusive gas transport. However, until now, no method is available to measure gas transport in situ in the soil. We developed a novel method to monitor gas transport in soil in situ. The method includes a custom made gas sampling device, the continuous injection of an inert tracer gas and inverse gas transport modelling in the soil. The gas sampling device has several sampling depths and can be easily installed into a vertical hole drilled by an auger, which allows for fast installation of the system. Helium (He) as inert tracer gas was injected continuously at the lower end of the device. The resulting steady state distribution of He was used to deduce the depth profile of DS. Gas transport in the soil surrounding the gas-sampling-device/soil system was modeled using the Finite Element Modeling program COMSOL . We tested our new method both in the lab and during two short field studies and compared the results with a reference method using soil cores. DS profiles obtained by our in-situ method were consistent with DS profiles determined based on soil core analyses. During a longer monitoring field campaign, typical soil-moisture effects upon gas diffusivity such as an increase during a drying period or a decrease after rain could be observed consistently. Under windy conditions we additionally measured for the first time the direct enhancement of gas transport in soil due to wind-induced pressure-pumping which could increase the effective DS up to 30% in the topsoil. Our novel monitoring method can be quickly and easily installed and allows for monitoring continuously soil gas transport over a long time. It allows monitoring physical modifications of soil gas diffusivity due to rain events or evaporation but it also allows studying non-diffusive gas transport processes in the soil.

Stabilization by hydrophobic protection as a molecular mechanism for organic carbon sequestration in maize-amended rice paddy soils.

PubMed

Song, X Y; Spaccini, R; Pan, G; Piccolo, A

2013-08-01

The hydrophobic components of soil organic matter (SOM) are reckoned to play an important role in the stabilization of soil organic carbon (SOC). The contribution of hydrophobic substances to SOC sequestration was evaluated in four different paddy soils in the South of China, following a 6-month incubation experiment with maize straw amendments. Soil samples included: a well developed paddy soil (TP) derived from clayey lacustrine deposits in the Tai Lake plain of Jiangsu; an acid clayey paddy soil (RP) derived from red earth in the rolling red soil area of Jiangxi; a weakly developed neutral paddy soil (PP) formed on Jurassic purple shale from Chongq; and a calcic Fluvisol (MS) derived from riverine sediments from a wetland along the Yangtze valley of Anhui, China. The SOC molecular composition after 30 and 180 days of incubation, was determined by off-line thermochemolysis followed by gas chromatography-mass spectrometry analysis. Lignin, lipids and carbohydrates were the predominant thermochemolysis products released from the treated soils. A selective preservation of hydrophobic OM, including lignin and lipids, was shown in maize amended soils with prolonged incubation. The decomposition of lignin and lipids was significantly slower in the TP and RP soils characterized by a larger content of extractable iron oxyhydrates (Fed) and lower pH. The overall increase in hydrophobic substances in maize incubated samples was correlated, positively, with total content of clay and Fed, and, negatively, with soil pH. Moreover, yields of both lignin and lipid components showed a significant relationship with SOC increase after incubation. These findings showed that the larger the lipid and lignin content of SOM, the greater was the stability of SOC, thereby suggesting that OM hydrophobic components may have an essential role in controlling the processes of OC sequestration in paddy soils of South China. Copyright © 2013 Elsevier B.V. All rights reserved.

Predicting and quantifying soil processes using “geomorphon” landform Classification

USDA-ARS?s Scientific Manuscript database

Soil development and behavior vary spatially at multiple observation scales. Predicting and quantifying soil properties and processes via a catena integrates predictable landscape scale variation relevant to both management decisions and soil survey. Soil maps generally convey variation as a set of ...

Soil-geomorphic significance of land surface characteristics in an arid mountain range, Mojave Desert, USA

USGS Publications Warehouse

Hirmas, D.R.; Graham, R.C.; Kendrick, K.J.

2011-01-01

Mountains comprise an extensive and visually prominent portion of the landscape in the Mojave Desert, California. Landform surface properties influence the role these mountains have in geomorphic processes such as dust flux and surface hydrology across the region. The primary goal of this study was to describe and quantify land surface properties of arid-mountain landforms as a step toward unraveling the role these properties have in soil-geomorphic processes. As part of a larger soil-geomorphic study, four major landform types were identified within the southern Fry Mountains in the southwestern Mojave Desert on the basis of topography and landscape position: mountaintop, mountainflank, mountainflat (intra-range low-relief surface), and mountainbase. A suite of rock, vegetation, and morphometric land surface characteristic variables was measured at each of 65 locations across the study area, which included an associated piedmont and playa. Our findings show that despite the variation within types, landforms have distinct land surface properties that likely control soil-geomorphic processes. We hypothesize that surface expression influences a feedback process at this site where water transports sediment to low lying areas on the landscape and wind carries dust and soluble salts to the mountains where they are washed between rocks, incorporated into the soil, and retained as relatively long-term storage. Recent land-based video and satellite photographs of the dust cloud emanating from the Sierra Cucapá Mountains in response to the 7.2-magnitude earthquake near Mexicali, Mexico, support the hypothesis that these landforms are massive repositories of dust.

Verification and completion of a soil data base for process based erosion model applications in Mato Grosso/Brazil

NASA Astrophysics Data System (ADS)

Schindewolf, Marcus; Schultze, Nico; Schönke, Daniela; Amorim, Ricardo S. S.; Schmidt, Jürgen

2014-05-01

The study area of central Mato Grosso is subjected to severe soil erosion. Continuous erosion leads to massive losses of top soil and related organic carbon. Consequently agricultural soil soils suffer a drop in soil fertility which only can be balanced by mineral fertilization. In order to control soil degradation and organic carbon losses of Mato Grosso cropland soils a process based soil loss and deposition model is used. Applying the model it will be possible to: - identify the main areas affected by soil erosion or deposition in different scales under present and future climate and socio-economic conditions - estimate the related nutrient and organic carbon losses/yields - figure out site-related causes of soil mobilization/deposition - locate sediment and sediment related nutrient and organic matter pass over points into surface water bodies - estimate the impacts of climate and land use changes on the losses of top soil, sediment bound nutrients and organic carbon. Model input parameters include digital elevation data, precipitation characteristics and standard soil properties as particle size distribution, total organic carbon (TOC) and bulk density. The effects of different types of land use and agricultural management practices are accounted for by varying site-specific parameters predominantly related to soil surface properties such as erosional resistance, hydraulic roughness and percentage ground cover. In this context the existing EROSION 3D soil parameter data base deducted from large scale rainfall simulations in Germany is verified for application in the study area, using small scale disc type rainfall simulator with an additional runoff reflux approach. Thus it's possible to enlarge virtual plot length up to at least 10 m. Experimental plots are located in Cuiabá region of central Mato Grosso in order to cover the most relevant land use variants and tillage practices in the region. Results show that derived model parameters are highly influenced by soil management. This indicates a high importance of tillage impact on resistance to erosion, mulch cover and TOC. The measured parameter ranges can generally be confirmed by the existing data base, which only need to be completed due to changed phenological stages in Mato Grosso compared to German conditions.

Physical and Hydraulic Properties at Recently Burned and Long-Unburned Boreal Forest Areas in Interior Alaska, USA

NASA Astrophysics Data System (ADS)

Ebel, B. A.; Koch, J. C.; Walvoord, M. A.

2017-12-01

Boreal forest regions in interior Alaska, USA are subject to recurring wildfire disturbance and climate shifts. These "press" and "pulse" disturbances impact water, solute, carbon, and energy fluxes, with feedbacks and consequences that are not adequately characterized. The NASA Arctic Boreal Vulnerability Experiment (ABoVE) seeks to understand susceptibility to disturbance in boreal regions. Subsurface physical and hydraulic properties are among the largest uncertainties in cryohydrogeologic modeling aiming to predict impacts of disturbance in Arctic and boreal regions. We address this research gap by characterizing physical and hydraulic properties of soil across a gradient of sites covering disparate soil textures and wildfire disturbance in interior Alaska. Samples were collected in the field within the domain of the NASA ABoVE project and analyzed in the laboratory. Physical properties measured include soil organic matter fraction, soil-particle size distribution, dry bulk density, and saturated soil-water content. Hydraulic properties measured include soil-water retention and field-saturated hydraulic conductivity using tension infiltrometers (-1 cm applied pressure head). The physical and hydraulic properties provide the foundation for site conceptual model development, cryohydrogeologic model parameterization, and integration with geophysical data. This foundation contributes to the NASA ABoVE objectives of understanding the underlying physical processes that control vulnerability in Arctic and Boreal landscapes.

An Innovative Method for Estimating Soil Retention at a ...

EPA Pesticide Factsheets

Planning for a sustainable future should include an accounting of services currently provided by ecosystems such as erosion control. Retention of soil improves fertility, increases water retention, and decreases sedimentation in streams and rivers. Landscapes patterns that facilitate these services could help reduce costs for flood control, dredging of reservoirs and waterways, while maintaining habitat for fish and other species important to recreational and tourism industries. Landscape scale geospatial data available for the continental United States was leveraged to estimate sediment erosion (RUSLE-based, Renard, et al. 1997) employing recent geospatial techniques of sediment delivery ratio (SDR) estimation (Cavalli, et al. 2013). The approach was designed to derive a quantitative approximation of the ecological services provided by vegetative cover, management practices, and other surface features with respect to protecting soils from the erosion processes of detachment, transport, and deposition. Quantities of soil retained on the landscape and potential erosion for multiple land cover scenarios relative to current (NLCD 2011) conditions were calculated for each calendar month, and summed to yield annual estimations at a 30-meter grid cell. Continental-scale data used included MODIS NDVI data (2000-2014) to estimate monthly USLE C-factors, gridded soil survey geographic (gSSURGO) soils data (annual USLE K factor), PRISM rainfall data (monthly USLE

Pesticide interactions with soils affected by olive oil mill wastewater

NASA Astrophysics Data System (ADS)

Keren, Yonatan; Bukhanovsky, Nadezhda; Borisover, Mikhail

2013-04-01

Soil pesticide sorption is well known to affect the fate of pesticides, their bioavailability and the potential to contaminate air and water. Soil - pesticide interactions may be strongly influenced by soil organic matter (SOM) and organic matter (OM)-rich soil amendments. One special OM source in soils is related to olive oil production residues that may include both solid and liquid wastes. In the Mediterranean area, the olive oil production is considered as an important field in the agricultural sector. Due to the significant rise in olive oil production, the amount of wastes is growing respectively. Olive oil mill waste water (OMWW) is the liquid byproduct in the so-called "three phase" technological process. Features of OMWW include the high content of fatty aliphatic components and polyphenols and their often-considered toxicity. One way of OMWW disposal is the land spreading, e.g., in olive orchards. The land application of OMWW (either controlled or not) is supposed to affect the multiple soil properties, including hydrophobicity and the potential of soils to interact with pesticides. Therefore, there is both basic and applied interest in elucidating the interactions between organic compounds and soils affected by OMWW. However, little is known about the impact of OMWW - soil interactions on sorption of organic compounds, and specifically, on sorption of agrochemicals. This paper reports an experimental study of sorption interactions of a series of organic compounds including widely used herbicides such as diuron and simazine, in a range of soils that were affected by OMWW (i) historically or (ii) in the controlled land disposal experiments. It is demonstrated that there is a distinct increase in apparent sorption of organic chemicals in soils affected by OMWW. In selected systems, this increase may be explained by increase in SOM content. However, the SOM quality places a role: the rise in organic compound - soil interactions may both exceed the SOM content increase and be less than that. Sorption interactions of herbicides with soils demonstrate a strong hysteresis (which is not expected to be related to a biodegradation). The data suggests that the OMWW - soil interaction seems to change the shape of the apparent sorption isotherms of organic sorbates, and, possibly, their sorption mechanisms: from a Langmuir-like sorption isotherm (describing the adsorptive interactions with a saturation of sorption sites) in the native soils to the sigmoidal or linear isotherms (expected for a partitioning into the bulk OM phases and their swelling) in the OMWW-amended soils. These results may have a significant impact on multiple agricultural and hydrological aspects, e.g., such as the application rate of herbicides in the field, and their possible release and the long term effect on groundwater. The authors acknowledge the support from the OLIVEOIL project (SCHA849/13) funded by DFG.

Towards real time spatially resolved data on sediment transport: 1) tracing the motion of the fluorescent soil particles under rainfall

NASA Astrophysics Data System (ADS)

Quinton, John; Hardy, Rob; Pates, Jackie; James, Mike

2017-04-01

Understanding where sediment originates from and where it travels to, in what quantities and at which rate is at the heart of many questions surrounding sediment transport, including the connectivity problem. Progress towards unravelling these questions and deepening our understanding has come from a wide range of approaches, including laboratory and field experiments conducted at a variety of scales. In seeking to understand the connectivity of sources and sinks of sediment scientists have spent considerable energy in developing tracing technologies. These have included numerous studies that have relied on the chemical properties of the soil and sediment to establish source-sink connectivity, and the use of 137Ceasium, from radioactive fall-out, to map sediment redistribution. More recently there has been an upsurge in interest in the use of artificially applied soil tracers, including rare earth element oxides and magnetic minerals. However all these tracing methods have a significant drawback: they rely on the collection of samples to assess their concentration. This means that their spatial distribution cannot easily be established in situ and that the environment that is being studied is damaged by the sampling process; nor can data be collected in real time which allows a dynamic understanding of erosion and transport processes to be developed. In this paper we present a methodology for use with a commercially available fluorescent tracer. The tracer is produced in a range of sizes and fluorescent signatures and can be applied to the soil surface. Here we report on an application that combines novel fluorescent videography techniques with custom image processing to trace the motion of the fluorescent soil particles under rainfall. Here we demonstrate the tracking of multiple sub-millimetre particles simultaneously, establishing their position 50 times a second with submillimetre precision. From this we are able to visualise and quantify parameters such as distance and direction of travel. In a second abstract we report on the field application of the tracer at the hillslope scale during a tillage erosion experiment. Here we trialled both intensity based and particle counting methodologies for tracer enumeration. After simulating seven years of tillage on a hillslope we were able to precisely determine the distribution of the fluorescent tracer and also its incorporation and distribution within the soil profile. Single grains of tracer could be found over 35 m from the insertion point.

Seasonal characteristics of flood regimes across the Alpine-Carpathian range.

PubMed

Parajka, J; Kohnová, S; Bálint, G; Barbuc, M; Borga, M; Claps, P; Cheval, S; Dumitrescu, A; Gaume, E; Hlavčová, K; Merz, R; Pfaundler, M; Stancalie, G; Szolgay, J; Blöschl, G

2010-11-17

The aim of this paper is to analyse the differences in the long-term regimes of extreme precipitation and floods across the Alpine-Carpathian range using seasonality indices and atmospheric circulation patterns to understand the main flood-producing processes. This is supported by cluster analyses to identify areas of similar flood processes, both in terms of precipitation forcing and catchment processes. The results allow to isolate regions of similar flood generation processes including southerly versus westerly circulation patterns, effects of soil moisture seasonality due to evaporation and effects of soil moisture seasonality due to snow melt. In many regions of the Alpine-Carpathian range, there is a distinct shift in flood generating processes with flood magnitude as evidenced by a shift from summer to autumn floods. It is argued that the synoptic approach proposed here is valuable in both flood analysis and flood estimation.

Seasonal characteristics of flood regimes across the Alpine–Carpathian range

PubMed Central

Parajka, J.; Kohnová, S.; Bálint, G.; Barbuc, M.; Borga, M.; Claps, P.; Cheval, S.; Dumitrescu, A.; Gaume, E.; Hlavčová, K.; Merz, R.; Pfaundler, M.; Stancalie, G.; Szolgay, J.; Blöschl, G.

2010-01-01

Summary The aim of this paper is to analyse the differences in the long-term regimes of extreme precipitation and floods across the Alpine–Carpathian range using seasonality indices and atmospheric circulation patterns to understand the main flood-producing processes. This is supported by cluster analyses to identify areas of similar flood processes, both in terms of precipitation forcing and catchment processes. The results allow to isolate regions of similar flood generation processes including southerly versus westerly circulation patterns, effects of soil moisture seasonality due to evaporation and effects of soil moisture seasonality due to snow melt. In many regions of the Alpine–Carpathian range, there is a distinct shift in flood generating processes with flood magnitude as evidenced by a shift from summer to autumn floods. It is argued that the synoptic approach proposed here is valuable in both flood analysis and flood estimation. PMID:25067854

Processing data from soil assessment surveys with the computer program SOILS.

Treesearch

John W. Hazard; Jeralyn Snellgrove; J. Michael Geist

1985-01-01

Program SOILS processes data from soil assessment surveys following a design adopted by the Pacific Northwest Region of the USDA Forest Service. It accepts measurements from line transects and associated soil subsamples and generates estimates of the percentages of the sampled area falling in each soil condition class. Total disturbance is calculated by combining...

Mapping soil erosion risk in Serra de Grândola (Portugal)

NASA Astrophysics Data System (ADS)

Neto Paixão, H. M.; Granja Martins, F. M.; Zavala, L. M.; Jordán, A.; Bellinfante, N.

2012-04-01

Geomorphological processes can pose environmental risks to people and economical activities. Information and a better knowledge of the genesis of these processes is important for environmental planning, since it allows to model, quantify and classify risks, what can mitigate the threats. The objective of this research is to assess the soil erosion risk in Serra de Grândola, which is a north-south oriented mountain ridge with an altitude of 383 m, located in southwest of Alentejo (southern Portugal). The study area is 675 km2, including the councils of Grândola, Santiago do Cacém and Sines. The process for mapping of erosive status was based on the guidelines for measuring and mapping the processes of erosion of coastal areas of the Mediterranean proposed by PAP/RAC (1997), developed and later modified by other authors in different areas. This method is based on the application of a geographic information system that integrates different types of spatial information inserted into a digital terrain model and in their derivative models. Erosive status are classified using information from soil erodibility, slope, land use and vegetation cover. The rainfall erosivity map was obtained using the modified Fournier index, calculated from the mean monthly rainfall, as recorded in 30 meteorological stations with influence in the study area. Finally, the soil erosion risk map was designed by ovelaying the erosive status map and the rainfall erosivity map.

Bioavailability of xenobiotics in the soil environment.

PubMed

Katayama, Arata; Bhula, Raj; Burns, G Richard; Carazo, Elizabeth; Felsot, Allan; Hamilton, Denis; Harris, Caroline; Kim, Yong-Hwa; Kleter, Gijs; Koedel, Werner; Linders, Jan; Peijnenburg, J G M Willie; Sabljic, Aleksandar; Stephenson, R Gerald; Racke, D Kenneth; Rubin, Baruch; Tanaka, Keiji; Unsworth, John; Wauchope, R Donald

2010-01-01

It is often presumed that all chemicals in soil are available to microorganisms, plant roots, and soil fauna via dermal exposure. Subsequent bioaccumulation through the food chain may then result in exposure to higher organisms. Using the presumption of total availability, national governments reduce environmental threshold levels of regulated chemicals by increasing guideline safety margins. However, evidence shows that chemical residues in the soil environment are not always bioavailable. Hence, actual chemical exposure levels of biota are much less than concentrations present in soil would suggest. Because "bioavailability" conveys meaning that combines implications of chemical sol persistency, efficacy, and toxicity, insights on the magnitude of a chemicals soil bioavailability is valuable. however, soil bioavailability of chemicals is a complex topic, and is affected by chemical properties, soil properties, species exposed, climate, and interaction processes. In this review, the state-of-art scientific basis for bioavailability is addressed. Key points covered include: definition, factors affecting bioavailability, equations governing key transport and distributive kinetics, and primary methods for estimating bioavailability. Primary transport mechanisms in living organisms, critical to an understanding of bioavailability, also presage the review. Transport of lipophilic chemicals occurs mainly by passive diffusion for all microorganisms, plants, and soil fauna. Therefore, the distribution of a chemical between organisms and soil (bioavailable proportion) follows partition equilibrium theory. However, a chemical's bioavailability does not always follow partition equilibrium theory because of other interactions with soil, such as soil sorption, hysteretic desorption, effects of surfactants in pore water, formation of "bound residue", etc. Bioassays for estimating chemical bioavailability have been introduced with several targeted endpoints: microbial degradation, uptake by higher plants and soil fauna, and toxicity to organisms. However, there bioassays are often time consuming and laborious. Thus, mild extraction methods have been employed to estimate bioavailability of chemicals. Mild methods include sequential extraction using alcohols, hexane/water, supercritical fluids (carbon dioxide), aqueous hydroxypropyl-beta-cyclodextrin extraction, polymeric TENAX beads extraction, and poly(dimethylsiloxane)-coated solid-phase microextraction. It should be noted that mild extraction methods may predict bioavailability at the moment when measurements are carried out, but not the changes in bioavailability that may occur over time. Simulation models are needed to estimate better bioavailability as a function of exposure time. In the past, models have progressed significantly by addressing each group of organisms separately: microbial degradation, plant uptake via evapotranspiration processes, and uptake of soil fauna in their habitat. This approach has been used primarily because of wide differences in the physiology and behaviors of such disparate organisms. However, improvement of models is badly needed, Particularly to describe uptake processes by plant and animals that impinge on bioavailability. Although models are required to describe all important factors that may affect chemical bioavailability to individual organisms over time (e.g., sorption/desorption to soil/sediment, volatilization, dissolution, aging, "bound residue" formation, biodegradation, etc.), these models should be simplified, when possible, to limit the number of parameters to the practical minimum. Although significant scientific progress has been made in understanding the complexities in specific methodologies dedicated to determining bioavailability, no method has yet emerged to characterized bioavailability across a wide range of chemicals, organisms, and soils/sediments. The primary aim in studying bioavailability is to define options for addressing bioremediation or environmental toxicity (risk assessment), and that is unlikely to change. Because of its importance in estimating research is needed to more comprehensively address the key environmental issue of "bioavailability of chemicals in soil/sediment."

[Dynamics of soil physical properties and biological soil crust during the vegetation restoration process of abandoned croplands in the Ordos Plateau, China].

PubMed

Cai, Wen Tao; Li, He Yi; Lai, Li Ming; Zhang, Xiao Long; Guan, Tian Yu; Zhou, Ji Hua; Jiang, Lian He; Zheng, Yuan Run

2017-03-18

A series of typical abandoned croplands in the regions of Ruanliang and Yingliang in the Ordos Plateau, China, were selected, and dynamics of the surface litter, biological soil crust and soil bulk density, soil texture, and soil moisture in different soil layers were investigated. The results showed that in the abandoned cropland in Ruanliang, the clay particle content and surface litter of the surface soil layer (0-10 cm) increased during the restoration process, while that of soil bulk density substantially decreased and soil water content slightly increased in the surface soil. In the medium soil layer (10-30 cm), the clay particle content increased and the soil water content slightly decreased. In the deep soil layer (30-50 cm), there was a relatively large variation in the physical properties. In the abandoned cropland in Yingliang, the coverage of litter and the coverage and thickness of the biological soil crust increased during the abandonment process. The surface soil bulk density, soil clay particle content and soil water content remained constant in 0-10 cm soil layer, while the physical properties varied substantially in 10-40 cm soil layer. The shallow distribution of the soil water content caused by the accumulation of the litter and clay particles on the soil surface might be the key reason of the replacement of the semi-shrub Artemisia ordosica community with a perennial grass community over the last 20 years of the abandoned cropland in Ruanliang. The relatively high soil water content in the shallow layer and the development of the biological soil crust might explain why the abandoned cropland in Yingliang was not invaded by the semi-shrub A. ordosica during the restoration process.

Diel hysteresis between soil respiration and soil temperature in a biological soil crust covered desert ecosystem

PubMed Central

Li, Xinrong; Zhang, Peng; Chen, Yongle

2018-01-01

Soil respiration induced by biological soil crusts (BSCs) is an important process in the carbon (C) cycle in arid and semi-arid ecosystems, where vascular plants are restricted by the harsh environment, particularly the limited soil moisture. However, the interaction between temperature and soil respiration remains uncertain because of the number of factors that control soil respiration, including temperature and soil moisture, especially in BSC-dominated areas. In this study, the soil respiration in moss-dominated crusts and lichen-dominated crusts was continuously measured using an automated soil respiration system over a one-year period from November 2015 to October 2016 in the Shapotou region of the Tengger Desert, northern China. The results indicated that over daily cycles, the half-hourly soil respiration rates in both types of BSC-covered areas were commonly related to the soil temperature. The observed diel hysteresis between the half-hourly soil respiration rates and soil temperature in the BSC-covered areas was limited by nonlinearity loops with semielliptical shapes, and soil temperature often peaked later than the half-hourly soil respiration rates in the BSC-covered areas. The average lag times between the half-hourly soil respiration rates and soil temperature for both types of BSC-covered areas were two hours over the diel cycles, and they were negatively and linearly related to the volumetric soil water content. Our results highlight the diel hysteresis phenomenon that occurs between soil respiration rates and soil temperatures in BSC-covered areas and the negative response of this phenomenon to soil moisture, which may influence total C budget evaluations. Therefore, the interactive effects of soil temperature and moisture on soil respiration in BSC-covered areas should be considered in global carbon cycle models of desert ecosystems. PMID:29624606